BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027663
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FWS6|BBD1_ARATH Bifunctional nuclease 1 OS=Arabidopsis thaliana GN=BBD1 PE=2 SV=1
Length = 325
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/220 (85%), Positives = 206/220 (93%)
Query: 1 MIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMR 60
M+KMRDGR LRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAM
Sbjct: 106 MVKMRDGRQLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMT 165
Query: 61 NVQIARPTLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPS 120
NVQIARPT+YQVVKEM++KMGYEVRLVRVTKRVHEAYFAQL+L+KVGN +ECVSFDLRPS
Sbjct: 166 NVQIARPTMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPS 225
Query: 121 DAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTK 180
DAINIAVRCK+PIQVNKYLAYSDGMRVIESGK+ST +P SDGLLFTE D+P+GQ CLDTK
Sbjct: 226 DAINIAVRCKIPIQVNKYLAYSDGMRVIESGKISTPAPASDGLLFTEQDRPNGQACLDTK 285
Query: 181 EFNLVRNMLIAAVEERYRDAAQWRDKLGQLRAKRNLRKFT 220
EFN++ M+ A EERY +AA+WRDKLGQ RAKRNLRK+T
Sbjct: 286 EFNILSKMMQAVDEERYDEAAEWRDKLGQFRAKRNLRKYT 325
>sp|Q93VH2|BBD2_ARATH Bifunctional nuclease 2 OS=Arabidopsis thaliana GN=BBD2 PE=2 SV=1
Length = 329
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 181/220 (82%), Positives = 206/220 (93%)
Query: 1 MIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMR 60
M+KM+DGR LRCVHNNPQGG+LP+YAPH AIVLKMEDGTGLLLPIIVLEMPSVLLMAAM
Sbjct: 110 MVKMKDGRQLRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMT 169
Query: 61 NVQIARPTLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPS 120
NVQIARPT+YQVVK+M++KMGYEVRLVRVT RVHEAYFA+LYL+KVG++++CVSFDLRPS
Sbjct: 170 NVQIARPTMYQVVKDMVDKMGYEVRLVRVTTRVHEAYFAELYLSKVGDKSDCVSFDLRPS 229
Query: 121 DAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTK 180
DAINIAVRCKVPIQVNKYLAYSDGMRVI+SGKLS +P SDGLLFTELD+P+GQPC DTK
Sbjct: 230 DAINIAVRCKVPIQVNKYLAYSDGMRVIDSGKLSKQTPASDGLLFTELDRPNGQPCFDTK 289
Query: 181 EFNLVRNMLIAAVEERYRDAAQWRDKLGQLRAKRNLRKFT 220
EF+LVRNM+ A EERY +AA+WRDKLG+ +AKR LRK+T
Sbjct: 290 EFDLVRNMMQAVDEERYDEAAEWRDKLGKFQAKRKLRKYT 329
>sp|Q6YZM6|BBD2_ORYSJ Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica GN=BBD2
PE=2 SV=1
Length = 325
Score = 331 bits (849), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 153/214 (71%), Positives = 188/214 (87%)
Query: 1 MIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMR 60
+IKMRDG++LRCVHNN QG ++P+ AP PAIVL++EDG+ LLPIIVLEMPSVLLMAA+R
Sbjct: 108 VIKMRDGKNLRCVHNNSQGRNIPESAPQPAIVLRIEDGSETLLPIIVLEMPSVLLMAAIR 167
Query: 61 NVQIARPTLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPS 120
NV IARPT+YQVVKEMI+KMGYEV+LVR+ KR+ EAY A+L+LTKVG+ TE ++FDLRPS
Sbjct: 168 NVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELFLTKVGDHTESITFDLRPS 227
Query: 121 DAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTK 180
DAINIAVRCKVPIQV++ LAYSDG+R +E +++ + SDGLLFTELD+P GQPC++ +
Sbjct: 228 DAINIAVRCKVPIQVHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDRPDGQPCVEAQ 287
Query: 181 EFNLVRNMLIAAVEERYRDAAQWRDKLGQLRAKR 214
EF L+RNMLIAAVEERY+DAA WRDKL LR+KR
Sbjct: 288 EFGLIRNMLIAAVEERYKDAATWRDKLMLLRSKR 321
>sp|Q09LL3|BBD_ORYMI Bifunctional nuclease OS=Oryza minuta GN=BBD PE=2 SV=1
Length = 331
Score = 286 bits (733), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 175/214 (81%), Gaps = 1/214 (0%)
Query: 1 MIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMR 60
+IKMRDG++LRCV NNP+ L D APH AIVLKMEDG+ LLLPIIV+E PS++L+AA+R
Sbjct: 115 VIKMRDGKNLRCVQNNPRVLRLRDSAPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALR 174
Query: 61 NVQIARPTLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPS 120
N++I RPT+Y VVKEM E+MGY VRLVR+T+ VH+AY+++LYL K+GNE E +S DL+PS
Sbjct: 175 NIRIPRPTIYNVVKEMTERMGYAVRLVRITEMVHDAYYSRLYLAKIGNEEETISLDLKPS 234
Query: 121 DAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTK 180
DAINIA RCKVPIQVN+ +AY++G++V++ ++ SD +T LD+P QPC + +
Sbjct: 235 DAINIAFRCKVPIQVNRRIAYNNGLKVVQPTPSESYV-SSDQFQYTRLDRPDDQPCFEAQ 293
Query: 181 EFNLVRNMLIAAVEERYRDAAQWRDKLGQLRAKR 214
EF+LVRNML+AAVEERY+DAAQ+RD+L RAK+
Sbjct: 294 EFDLVRNMLVAAVEERYKDAAQYRDQLFMFRAKK 327
>sp|Q5N8J3|BBD1_ORYSJ Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica GN=BBD1
PE=2 SV=1
Length = 331
Score = 286 bits (732), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 175/214 (81%), Gaps = 1/214 (0%)
Query: 1 MIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMR 60
+IKMRDG++LRCV NNP+ L D APH AIVLKMEDG+ LLLPIIV+E PS++L+AA+R
Sbjct: 115 VIKMRDGKNLRCVQNNPRVLRLRDSAPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALR 174
Query: 61 NVQIARPTLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPS 120
N++I RPT+Y VVKEM E+MGY VRLVR+T+ VH+AY+++LYL K+GNE E +S DL+PS
Sbjct: 175 NIRIPRPTIYNVVKEMTERMGYAVRLVRITEMVHDAYYSRLYLAKIGNEEETISLDLKPS 234
Query: 121 DAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTK 180
DAINIA RCKVPIQVN+ +AY++G++V++ ++ SD +T LD+P QPC + +
Sbjct: 235 DAINIAFRCKVPIQVNRRIAYNNGLKVVQPTPSESYV-SSDQFQYTRLDRPDDQPCFEAQ 293
Query: 181 EFNLVRNMLIAAVEERYRDAAQWRDKLGQLRAKR 214
EF+LVRNML+AAVEERY+DAAQ+RD+L RAK+
Sbjct: 294 EFDLVRNMLVAAVEERYKDAAQYRDQLFMFRAKK 327
>sp|B8A8D2|BBD1_ORYSI Bifunctional nuclease 1 OS=Oryza sativa subsp. indica GN=BBD1 PE=3
SV=1
Length = 331
Score = 284 bits (727), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 174/214 (81%), Gaps = 1/214 (0%)
Query: 1 MIKMRDGRHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMR 60
+IKMRDG++LRCV NNP+ L D APH AIVLKMEDG+ LLLPIIV+E PS++L+AA+R
Sbjct: 115 VIKMRDGKNLRCVQNNPRVLRLRDSAPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALR 174
Query: 61 NVQIARPTLYQVVKEMIEKMGYEVRLVRVTKRVHEAYFAQLYLTKVGNETECVSFDLRPS 120
N++I RPT+Y VVKEM E+MGY VRLVR+T+ VH+AY+++LYL K+GNE E +S DL+PS
Sbjct: 175 NIRIPRPTIYNVVKEMTERMGYAVRLVRITEMVHDAYYSRLYLAKIGNEEETISLDLKPS 234
Query: 121 DAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTK 180
DAINIA RCKVPIQVN+ +AY++G++V++ ++ SD T LD+P QPC + +
Sbjct: 235 DAINIAFRCKVPIQVNRRIAYNNGLKVVQPTPSESYV-SSDQFQCTRLDRPDDQPCFEAQ 293
Query: 181 EFNLVRNMLIAAVEERYRDAAQWRDKLGQLRAKR 214
EF+LVRNML+AAVEERY+DAAQ+RD+L RAK+
Sbjct: 294 EFDLVRNMLVAAVEERYKDAAQYRDQLFMFRAKK 327
>sp|Q50604|Y1829_MYCTU Uncharacterized protein Rv1829/MT1877 OS=Mycobacterium tuberculosis
GN=Rv1829 PE=4 SV=2
Length = 164
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 28 HPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMRNVQIARPTLYQVVKEMIEKMGYEVRLV 87
P ++L+ +G L PI + + + + + V+ RP + +++++I +G+ ++ V
Sbjct: 17 QPVLLLREANGDRYL-PIWIGQSEAAAIALEQQGVEPPRPLTHDLIRDLIAALGHSLKEV 75
Query: 88 RVTKRVHEAYFAQLYLTKVGNETECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRV 147
R+ ++A L + + RPSD++ IA+R VPI V + + G+ +
Sbjct: 76 RIVDLQEGTFYADLIFDR------NIKVSARPSDSVAIALRVGVPIYVEEAVLAQAGLLI 129
>sp|Q1RK25|EX7L_RICBR Exodeoxyribonuclease 7 large subunit OS=Rickettsia bellii (strain
RML369-C) GN=xseA PE=3 SV=1
Length = 442
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C PI +DGM V+ SGKLS+++ S L E +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVENLQPAG 110
>sp|A8GXS3|EX7L_RICB8 Exodeoxyribonuclease 7 large subunit OS=Rickettsia bellii (strain
OSU 85-389) GN=xseA PE=3 SV=1
Length = 442
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C PI +DGM V+ SGKLS+++ S L E +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVENLQPAG 110
>sp|Q68W63|EX7L_RICTY Exodeoxyribonuclease 7 large subunit OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=xseA PE=3 SV=1
Length = 453
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C PI V +DGM V+ GKLS++S S L + +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPILVKIKFPLNDGMEVVIGGKLSSYSGNSRYQLSVDNLQPAG 110
>sp|Q92GU6|EX7L_RICCN Exodeoxyribonuclease 7 large subunit OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=xseA PE=3 SV=2
Length = 444
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C PI +DGM V+ SGKLS+++ S L + +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPILAKITFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTG 110
>sp|C3PPC7|EX7L_RICAE Exodeoxyribonuclease 7 large subunit OS=Rickettsia africae (strain
ESF-5) GN=xseA PE=3 SV=1
Length = 444
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C PI +DGM V+ SGKLS+++ S L + +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTG 110
>sp|Q4UMV4|EX7L_RICFE Exodeoxyribonuclease 7 large subunit OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=xseA PE=3 SV=2
Length = 450
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C PI +DGM V+ SGKLS+++ S L + +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPAG 110
>sp|Q9KHS2|SSUD_PSESP Alkanesulfonate monooxygenase OS=Pseudomonas sp. GN=ssuD PE=3 SV=1
Length = 382
Score = 33.9 bits (76), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 136 NKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLVRNMLIAAVE 194
KYL SDG R ++ G L + +D L F + P+G+ C D+ LV LI E
Sbjct: 15 GKYLGTSDGARAVDHGYLQQIAQAADRLGFGGVLIPTGRSCEDSW---LVAASLIPVTE 70
>sp|Q9ZCP8|EX7L_RICPR Exodeoxyribonuclease 7 large subunit OS=Rickettsia prowazekii
(strain Madrid E) GN=xseA PE=3 SV=1
Length = 453
Score = 33.9 bits (76), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C PI +DGM V+ GKLS++S S L + +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPILAKIKFPLNDGMEVVIGGKLSSYSGNSRYQLSVDNLQPAG 110
>sp|Q9KHR3|SSUD_BUTSP Alkanesulfonate monooxygenase OS=Buttiauxella sp. (strain PNBS)
GN=ssuD PE=3 SV=1
Length = 382
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 136 NKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDT 179
KYL SDG R ++ G L + +D L F + P+G+ C D+
Sbjct: 15 GKYLGTSDGARAVDHGYLQQIAQAADRLGFGGVLIPTGRSCEDS 58
>sp|B0KH56|SSUD_PSEPG Alkanesulfonate monooxygenase OS=Pseudomonas putida (strain GB-1)
GN=ssuD PE=3 SV=1
Length = 382
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 136 NKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDT 179
KYL SDG R ++ G L + +D L F + P+G+ C D+
Sbjct: 15 GKYLGTSDGARAVDHGYLQQIAQAADRLGFGGVLIPTGRSCEDS 58
>sp|P75010|TERW_SERMA Tellurium resistance protein TerW OS=Serratia marcescens GN=terW
PE=4 SV=1
Length = 155
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 17/113 (15%)
Query: 61 NVQIARPTLYQVVKEMIE---------KMGYEVRLV-------RVTKRVHEAYFAQLYLT 104
+++ + PTL + +KE+ E K G+ LV + +R++EA AQ
Sbjct: 31 SLECSEPTLTRALKELRESYSAEIKYSKAGHSYHLVNPGQLDKKTLRRMNEA-LAQNAEL 89
Query: 105 KVGNETECVSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHS 157
K G T V D A+++++R ++ ++++ A S R KL+ HS
Sbjct: 90 KTGESTGKVVLDKDKKTAVSLSLRMRILRKIDRLAALSGSTRSEAVEKLALHS 142
>sp|A8GPH1|EX7L_RICAH Exodeoxyribonuclease 7 large subunit OS=Rickettsia akari (strain
Hartford) GN=xseA PE=3 SV=1
Length = 444
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C PI +DG+ V+ SGKLS+++ S L + +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPILAKIKFPLNDGIEVVISGKLSSYAGNSRYQLSVDNLQPAG 110
>sp|Q4QNE5|EX7L_HAEI8 Exodeoxyribonuclease 7 large subunit OS=Haemophilus influenzae
(strain 86-028NP) GN=xseA PE=3 SV=1
Length = 439
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 85 RLVRVTKRVHEAYFAQLYLT-KVGNETECVS--FDLRPSDAINIAVRCKVPIQVNKYLAY 141
+L +++ E F+Q++LT ++ N T+ VS + L D N VRC + N +A+
Sbjct: 10 QLNSAARQMLEGNFSQIWLTGEISNFTQPVSGHWYLTLKDE-NAQVRCAMFRMKNLRVAF 68
Query: 142 --SDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLVRNMLIA 191
+GM+V+ +S + P D L + P+G+ L ++F ++ L A
Sbjct: 69 RPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQ-QQFEALKMKLAA 119
>sp|Q1IGL6|SSUD_PSEE4 Alkanesulfonate monooxygenase OS=Pseudomonas entomophila (strain
L48) GN=ssuD PE=3 SV=1
Length = 382
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 136 NKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLVRNMLIAAVE 194
KYL ++G R ++ G LS + +D L F + P+G+ C D+ LV LI E
Sbjct: 15 GKYLGTTEGARAVDHGYLSQIAQAADRLGFGGVLIPTGRSCEDSW---LVAASLIPVTE 70
>sp|A8EZN6|EX7L_RICCK Exodeoxyribonuclease 7 large subunit OS=Rickettsia canadensis
(strain McKiel) GN=xseA PE=3 SV=1
Length = 444
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 115 FDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTHSPGSDGLLFTELDKPSG 173
F+L+ + AI +A C P DGM V+ SGKLS+++ S L + +P+G
Sbjct: 53 FNLKENTAI-LACTCWRPTLAKIKFPLKDGMEVVISGKLSSYAGNSRYQLAVDNLQPAG 110
>sp|P43913|EX7L_HAEIN Exodeoxyribonuclease 7 large subunit OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=xseA PE=3
SV=1
Length = 439
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 85 RLVRVTKRVHEAYFAQLYLT-KVGNETECVS--FDLRPSDAINIAVRCKVPIQVNKYLAY 141
+L +++ E F Q++LT ++ N T+ VS + L D N VRC + N +A+
Sbjct: 10 QLNSAARQMLEGNFCQIWLTGEISNFTQPVSGHWYLTLKDE-NAQVRCAMFRMKNLRVAF 68
Query: 142 --SDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLVRNMLIA 191
+GM+V+ +S + P D L + P+G+ L ++F ++ L A
Sbjct: 69 RPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQ-QQFEALKMKLAA 119
>sp|Q80VP2|SPAT7_MOUSE Spermatogenesis-associated protein 7 homolog OS=Mus musculus
GN=Spata7 PE=2 SV=1
Length = 582
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 15/65 (23%)
Query: 126 AVRCKVPIQVNKYLAYSDGMR---------------VIESGKLSTHSPGSDGLLFTELDK 170
AV C +P+ VN + Y+D R + + T+S + L K
Sbjct: 65 AVDCSIPVSVNTSIKYADQQRREKLRKELARCEKEFKLSKSAMQTNSKMNSKFFVNSLQK 124
Query: 171 PSGQP 175
PSG+P
Sbjct: 125 PSGEP 129
>sp|Q9CP86|EX7L_PASMU Exodeoxyribonuclease 7 large subunit OS=Pasteurella multocida
(strain Pm70) GN=xseA PE=3 SV=1
Length = 445
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 82 YEVRLVRVTKRVH-EAYFAQLYLT-KVGNETECVS--FDLRPSDAINIAVRCKVPIQVNK 137
Y V + T RV E Q++LT ++ N T+ VS + L D N VRC + N
Sbjct: 6 YSVSQLNQTVRVMLENQLRQVWLTGEISNFTQPVSGHWYLTLKDE-NAQVRCAMFRMKNM 64
Query: 138 YLAY--SDGMRVIESGKLSTHSPGSDGLLFTELDKPSGQPCLDTKEFNLVRNMLIA 191
+++ +GM+V+ +S + P D L E P+G+ L ++F ++ L A
Sbjct: 65 RVSFRPQNGMQVLVHASVSLYEPRGDYQLIIESMHPAGEGLLQ-QQFEALKMQLAA 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,023,236
Number of Sequences: 539616
Number of extensions: 3200768
Number of successful extensions: 7321
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 7302
Number of HSP's gapped (non-prelim): 28
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)