Query 027664
Match_columns 220
No_of_seqs 133 out of 1743
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 13:19:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027664.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027664hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.5E-38 3.2E-43 245.6 19.2 210 1-213 126-338 (339)
2 KOG0023 Alcohol dehydrogenase, 100.0 9.9E-36 2.1E-40 223.7 19.2 215 1-216 141-358 (360)
3 PLN02586 probable cinnamyl alc 100.0 1.6E-34 3.5E-39 231.9 22.4 215 2-216 143-357 (360)
4 PLN02178 cinnamyl-alcohol dehy 100.0 6.1E-34 1.3E-38 229.3 22.5 214 2-215 137-351 (375)
5 KOG0024 Sorbitol dehydrogenase 100.0 9.3E-34 2E-38 213.5 18.7 210 2-214 131-354 (354)
6 PLN02514 cinnamyl-alcohol dehy 100.0 3E-33 6.4E-38 224.5 22.0 214 2-215 140-353 (357)
7 COG0604 Qor NADPH:quinone redu 100.0 1.6E-33 3.5E-38 221.8 19.1 209 2-212 102-326 (326)
8 PRK09880 L-idonate 5-dehydroge 100.0 2.9E-31 6.3E-36 212.0 19.7 207 2-212 131-343 (343)
9 PLN03154 putative allyl alcoho 100.0 3.6E-31 7.7E-36 211.6 19.4 204 10-214 125-347 (348)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 4.8E-31 1E-35 212.8 19.7 208 2-210 151-371 (371)
11 KOG1197 Predicted quinone oxid 100.0 1.6E-31 3.4E-36 194.9 15.0 213 2-216 106-334 (336)
12 cd08239 THR_DH_like L-threonin 100.0 9E-31 1.9E-35 208.9 20.4 207 2-212 124-339 (339)
13 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.9E-30 4.1E-35 206.0 19.8 202 2-210 126-328 (329)
14 COG1062 AdhC Zn-dependent alco 100.0 2.2E-30 4.8E-35 196.9 17.4 207 2-211 145-365 (366)
15 KOG1198 Zinc-binding oxidoredu 100.0 3.8E-30 8.2E-35 203.0 18.9 210 2-213 111-346 (347)
16 TIGR03201 dearomat_had 6-hydro 100.0 8.4E-30 1.8E-34 204.0 20.2 208 2-211 121-348 (349)
17 TIGR03451 mycoS_dep_FDH mycoth 100.0 7.4E-30 1.6E-34 205.0 19.8 208 2-211 136-357 (358)
18 PLN02827 Alcohol dehydrogenase 100.0 1.6E-29 3.5E-34 204.1 21.8 210 2-213 153-377 (378)
19 cd08295 double_bond_reductase_ 100.0 6.3E-29 1.4E-33 198.2 19.3 210 2-212 108-338 (338)
20 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.1E-28 2.3E-33 198.9 20.5 208 2-212 145-368 (368)
21 PLN02740 Alcohol dehydrogenase 100.0 1E-28 2.2E-33 199.8 20.3 207 2-211 158-380 (381)
22 KOG0022 Alcohol dehydrogenase, 100.0 5.4E-29 1.2E-33 186.8 16.8 207 2-211 152-374 (375)
23 PRK10309 galactitol-1-phosphat 100.0 1.6E-28 3.5E-33 196.5 20.3 208 2-212 122-346 (347)
24 TIGR02825 B4_12hDH leukotriene 100.0 1.1E-28 2.5E-33 195.8 19.0 207 3-211 94-325 (325)
25 cd08296 CAD_like Cinnamyl alco 100.0 2.9E-28 6.2E-33 194.1 20.9 207 2-211 124-333 (333)
26 cd08300 alcohol_DH_class_III c 100.0 4.4E-28 9.5E-33 195.4 20.7 207 2-211 146-368 (368)
27 cd08277 liver_alcohol_DH_like 100.0 5E-28 1.1E-32 194.9 20.6 207 2-211 144-365 (365)
28 cd08301 alcohol_DH_plants Plan 100.0 1.1E-27 2.4E-32 193.2 20.3 206 2-210 147-368 (369)
29 cd08237 ribitol-5-phosphate_DH 100.0 4.3E-28 9.4E-33 193.5 17.0 204 2-213 122-340 (341)
30 cd08233 butanediol_DH_like (2R 100.0 1.1E-27 2.4E-32 192.0 19.4 207 2-211 134-351 (351)
31 cd05283 CAD1 Cinnamyl alcohol 100.0 2.8E-27 6.1E-32 188.7 20.9 208 2-211 130-337 (337)
32 cd08294 leukotriene_B4_DH_like 100.0 1.7E-27 3.6E-32 189.3 18.6 209 2-212 95-329 (329)
33 COG1063 Tdh Threonine dehydrog 100.0 3E-27 6.4E-32 188.5 19.2 210 2-212 128-350 (350)
34 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.2E-27 2.6E-32 188.4 16.4 197 2-211 108-308 (308)
35 cd08291 ETR_like_1 2-enoyl thi 100.0 3.2E-27 6.9E-32 187.4 18.5 205 2-211 104-324 (324)
36 cd08231 MDR_TM0436_like Hypoth 100.0 7.3E-27 1.6E-31 187.9 19.8 209 2-212 136-361 (361)
37 cd08230 glucose_DH Glucose deh 100.0 5.1E-27 1.1E-31 188.4 18.6 205 2-212 128-355 (355)
38 cd05284 arabinose_DH_like D-ar 100.0 1.3E-26 2.8E-31 185.1 20.6 209 2-212 126-340 (340)
39 TIGR03366 HpnZ_proposed putati 100.0 2.5E-27 5.5E-32 184.3 16.1 189 2-192 80-280 (280)
40 cd08293 PTGR2 Prostaglandin re 100.0 3.1E-26 6.7E-31 183.2 21.7 210 2-212 108-345 (345)
41 COG2130 Putative NADP-dependen 99.9 2.9E-26 6.2E-31 171.7 17.8 211 3-214 109-340 (340)
42 PRK09422 ethanol-active dehydr 99.9 5.3E-26 1.1E-30 181.4 20.6 210 2-213 123-337 (338)
43 cd08238 sorbose_phosphate_red 99.9 3.7E-26 8.1E-31 186.5 19.1 209 7-218 130-374 (410)
44 cd08246 crotonyl_coA_red croto 99.9 5.6E-26 1.2E-30 184.7 19.8 208 2-211 151-392 (393)
45 cd08292 ETR_like_2 2-enoyl thi 99.9 6.4E-26 1.4E-30 179.8 19.1 207 2-211 100-324 (324)
46 TIGR01751 crot-CoA-red crotony 99.9 1.3E-25 2.9E-30 182.8 20.4 214 2-217 147-392 (398)
47 cd08240 6_hydroxyhexanoate_dh_ 99.9 1.2E-25 2.6E-30 180.2 19.5 209 2-211 135-349 (350)
48 cd08297 CAD3 Cinnamyl alcohol 99.9 1.7E-25 3.6E-30 178.7 19.9 209 2-212 126-341 (341)
49 TIGR02819 fdhA_non_GSH formald 99.9 2.2E-25 4.8E-30 180.6 20.4 209 2-213 140-391 (393)
50 cd08274 MDR9 Medium chain dehy 99.9 2.2E-25 4.7E-30 178.6 19.1 207 2-212 138-350 (350)
51 cd08254 hydroxyacyl_CoA_DH 6-h 99.9 3.1E-25 6.6E-30 176.8 19.4 210 2-212 125-338 (338)
52 KOG0025 Zn2+-binding dehydroge 99.9 9E-25 1.9E-29 162.4 17.9 211 2-213 120-353 (354)
53 cd08278 benzyl_alcohol_DH Benz 99.9 8E-25 1.7E-29 176.3 19.3 208 2-211 146-365 (365)
54 cd08263 Zn_ADH10 Alcohol dehyd 99.9 5.6E-25 1.2E-29 177.4 18.4 209 2-211 147-367 (367)
55 cd08260 Zn_ADH6 Alcohol dehydr 99.9 1.3E-24 2.9E-29 173.8 20.4 204 7-211 130-344 (345)
56 cd08285 NADP_ADH NADP(H)-depen 99.9 6.7E-25 1.4E-29 175.9 18.6 205 6-212 131-351 (351)
57 PRK10083 putative oxidoreducta 99.9 1.4E-24 3E-29 173.3 20.2 209 2-214 122-339 (339)
58 cd08261 Zn_ADH7 Alcohol dehydr 99.9 2E-24 4.4E-29 172.2 20.9 207 2-212 122-337 (337)
59 cd08244 MDR_enoyl_red Possible 99.9 1.9E-24 4.1E-29 171.3 19.8 208 2-212 103-324 (324)
60 cd08262 Zn_ADH8 Alcohol dehydr 99.9 3E-24 6.4E-29 171.5 20.9 207 2-211 123-341 (341)
61 PRK13771 putative alcohol dehy 99.9 1.4E-24 3E-29 172.9 18.4 206 2-212 123-333 (334)
62 cd08290 ETR 2-enoyl thioester 99.9 1.7E-24 3.6E-29 172.9 18.9 209 2-212 106-341 (341)
63 cd05279 Zn_ADH1 Liver alcohol 99.9 2.8E-24 6E-29 173.2 19.5 206 2-210 143-364 (365)
64 cd05282 ETR_like 2-enoyl thioe 99.9 2.3E-24 5E-29 170.7 18.7 208 2-211 98-323 (323)
65 cd08286 FDH_like_ADH2 formalde 99.9 4.1E-24 9E-29 171.0 20.2 208 3-212 125-345 (345)
66 PTZ00354 alcohol dehydrogenase 99.9 3.2E-24 7E-29 170.6 18.7 213 2-216 100-332 (334)
67 cd08232 idonate-5-DH L-idonate 99.9 5.7E-24 1.2E-28 169.7 20.1 206 2-212 127-339 (339)
68 cd08270 MDR4 Medium chain dehy 99.9 4.7E-24 1E-28 167.7 19.0 203 2-212 93-305 (305)
69 KOG1202 Animal-type fatty acid 99.9 4E-25 8.7E-30 188.6 13.7 213 1-214 1511-1743(2376)
70 cd08283 FDH_like_1 Glutathione 99.9 6.5E-24 1.4E-28 172.1 20.3 207 3-211 144-385 (386)
71 cd08245 CAD Cinnamyl alcohol d 99.9 5.2E-24 1.1E-28 169.4 19.4 207 2-210 123-330 (330)
72 TIGR02823 oxido_YhdH putative 99.9 1E-23 2.2E-28 167.2 20.2 208 2-211 102-322 (323)
73 cd05285 sorbitol_DH Sorbitol d 99.9 9.5E-24 2.1E-28 168.8 20.1 205 2-210 124-341 (343)
74 cd05278 FDH_like Formaldehyde 99.9 6.4E-24 1.4E-28 169.9 19.0 209 2-212 126-347 (347)
75 cd08242 MDR_like Medium chain 99.9 6.9E-24 1.5E-28 168.0 18.8 200 2-212 117-319 (319)
76 TIGR02817 adh_fam_1 zinc-bindi 99.9 5.7E-24 1.2E-28 169.5 18.4 206 2-211 103-334 (336)
77 cd08243 quinone_oxidoreductase 99.9 8.8E-24 1.9E-28 167.1 19.0 207 2-210 102-319 (320)
78 cd08256 Zn_ADH2 Alcohol dehydr 99.9 1.9E-23 4E-28 167.5 20.8 204 3-210 136-350 (350)
79 cd08235 iditol_2_DH_like L-idi 99.9 1.1E-23 2.4E-28 168.3 19.2 200 8-211 133-343 (343)
80 cd05280 MDR_yhdh_yhfp Yhdh and 99.9 1.2E-23 2.6E-28 166.8 19.2 209 2-212 103-325 (325)
81 cd08284 FDH_like_2 Glutathione 99.9 1.9E-23 4.1E-28 167.0 20.2 202 6-211 132-343 (344)
82 cd08298 CAD2 Cinnamyl alcohol 99.9 1.4E-23 3E-28 166.8 19.2 201 2-210 128-329 (329)
83 cd08279 Zn_ADH_class_III Class 99.9 1.7E-23 3.6E-28 168.6 19.8 207 2-209 142-362 (363)
84 cd08289 MDR_yhfp_like Yhfp put 99.9 8E-24 1.7E-28 168.0 17.6 209 2-212 103-326 (326)
85 cd08299 alcohol_DH_class_I_II_ 99.9 2.2E-23 4.8E-28 168.3 20.0 207 2-211 150-372 (373)
86 cd08276 MDR7 Medium chain dehy 99.9 3.8E-23 8.3E-28 164.5 20.9 208 2-211 120-335 (336)
87 cd05288 PGDH Prostaglandin deh 99.9 1.4E-23 3.1E-28 166.8 17.4 208 2-210 101-329 (329)
88 cd08282 PFDH_like Pseudomonas 99.9 4.8E-23 1E-27 166.5 20.4 202 7-212 139-375 (375)
89 cd08236 sugar_DH NAD(P)-depend 99.9 3.3E-23 7.2E-28 165.6 18.7 206 2-210 121-343 (343)
90 cd08259 Zn_ADH5 Alcohol dehydr 99.9 6.6E-23 1.4E-27 163.0 20.1 206 2-211 123-332 (332)
91 PRK10754 quinone oxidoreductas 99.9 3.9E-23 8.5E-28 164.1 18.0 207 2-211 100-326 (327)
92 cd08287 FDH_like_ADH3 formalde 99.9 1.2E-22 2.6E-27 162.5 20.3 203 6-211 128-344 (345)
93 cd08264 Zn_ADH_like2 Alcohol d 99.9 6.5E-23 1.4E-27 162.7 18.3 198 2-208 123-324 (325)
94 PLN02702 L-idonate 5-dehydroge 99.9 3.2E-22 6.9E-27 161.2 20.8 206 2-211 143-363 (364)
95 cd08265 Zn_ADH3 Alcohol dehydr 99.9 2.3E-22 5.1E-27 163.0 20.0 206 2-210 156-383 (384)
96 cd08249 enoyl_reductase_like e 99.9 1.8E-22 3.8E-27 161.2 19.0 208 2-212 104-339 (339)
97 cd08266 Zn_ADH_like1 Alcohol d 99.9 2.8E-22 6.2E-27 159.7 19.8 209 2-212 126-342 (342)
98 PRK05396 tdh L-threonine 3-deh 99.9 2.7E-22 5.8E-27 160.3 19.2 207 2-213 126-341 (341)
99 cd05286 QOR2 Quinone oxidoredu 99.9 3.6E-22 7.9E-27 157.4 19.5 209 2-212 96-320 (320)
100 cd08252 AL_MDR Arginate lyase 99.9 4E-22 8.6E-27 158.9 19.6 207 2-211 104-336 (336)
101 cd08269 Zn_ADH9 Alcohol dehydr 99.9 3.3E-22 7.3E-27 157.7 18.8 204 2-210 92-311 (312)
102 cd08288 MDR_yhdh Yhdh putative 99.9 5.6E-22 1.2E-26 157.3 19.6 209 2-212 103-324 (324)
103 cd05281 TDH Threonine dehydrog 99.9 4.9E-22 1.1E-26 158.8 18.9 206 2-212 126-341 (341)
104 TIGR00692 tdh L-threonine 3-de 99.9 6.5E-22 1.4E-26 158.0 19.6 206 2-212 124-340 (340)
105 KOG1196 Predicted NAD-dependen 99.9 1.4E-22 2.9E-27 151.6 14.3 192 22-214 133-342 (343)
106 cd08250 Mgc45594_like Mgc45594 99.9 5E-22 1.1E-26 157.9 18.6 205 2-211 101-329 (329)
107 cd08234 threonine_DH_like L-th 99.9 7.7E-22 1.7E-26 157.1 19.0 204 2-210 121-333 (334)
108 cd08253 zeta_crystallin Zeta-c 99.9 7.9E-22 1.7E-26 155.9 18.3 209 2-212 104-325 (325)
109 cd08255 2-desacetyl-2-hydroxye 99.9 3.6E-22 7.7E-27 155.1 15.5 203 2-210 59-277 (277)
110 cd05276 p53_inducible_oxidored 99.9 1.4E-21 3.1E-26 154.2 18.4 207 2-210 99-323 (323)
111 smart00829 PKS_ER Enoylreducta 99.9 2.3E-21 4.9E-26 150.7 16.7 206 2-210 64-288 (288)
112 cd08248 RTN4I1 Human Reticulon 99.9 7.7E-21 1.7E-25 152.3 19.6 207 2-211 118-350 (350)
113 cd08272 MDR6 Medium chain dehy 99.9 5.6E-21 1.2E-25 151.3 18.4 205 2-212 104-326 (326)
114 TIGR02824 quinone_pig3 putativ 99.9 7.9E-21 1.7E-25 150.3 19.1 209 2-212 99-325 (325)
115 cd08251 polyketide_synthase po 99.9 4.2E-21 9E-26 150.5 17.2 205 2-210 81-303 (303)
116 cd08241 QOR1 Quinone oxidoredu 99.9 6.6E-21 1.4E-25 150.5 18.0 208 2-211 99-323 (323)
117 cd08258 Zn_ADH4 Alcohol dehydr 99.9 4.5E-21 9.7E-26 151.0 16.2 175 2-178 125-306 (306)
118 cd05195 enoyl_red enoyl reduct 99.9 1.1E-20 2.3E-25 147.1 17.9 206 2-210 68-293 (293)
119 cd08267 MDR1 Medium chain dehy 99.9 1.3E-20 2.8E-25 148.9 17.6 206 2-210 103-319 (319)
120 cd08273 MDR8 Medium chain dehy 99.9 1.9E-20 4.1E-25 148.9 18.3 205 2-210 99-330 (331)
121 cd05289 MDR_like_2 alcohol deh 99.9 1.1E-20 2.4E-25 148.5 16.4 202 2-210 104-309 (309)
122 cd08247 AST1_like AST1 is a cy 99.9 2E-20 4.3E-25 150.2 17.7 203 7-211 115-351 (352)
123 cd08268 MDR2 Medium chain dehy 99.9 3.8E-20 8.2E-25 146.6 18.8 208 2-211 104-327 (328)
124 cd08271 MDR5 Medium chain dehy 99.9 3.2E-20 6.9E-25 147.0 16.6 208 2-212 101-325 (325)
125 cd05188 MDR Medium chain reduc 99.9 3.4E-20 7.4E-25 143.1 16.2 172 2-174 94-270 (271)
126 cd08275 MDR3 Medium chain dehy 99.8 2.1E-19 4.6E-24 143.0 19.3 208 2-212 98-337 (337)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 1.1E-19 2.3E-24 125.5 10.9 124 53-177 1-130 (130)
128 cd00401 AdoHcyase S-adenosyl-L 99.7 6E-16 1.3E-20 124.5 14.2 173 31-213 189-377 (413)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 4.1E-17 9E-22 112.1 6.2 117 86-210 1-127 (127)
130 PRK09424 pntA NAD(P) transhydr 99.6 3.8E-14 8.2E-19 116.9 16.2 142 41-183 163-335 (509)
131 PRK11873 arsM arsenite S-adeno 99.0 2.2E-09 4.7E-14 83.3 10.1 166 39-211 74-260 (272)
132 PRK05476 S-adenosyl-L-homocyst 99.0 1.2E-08 2.7E-13 82.8 13.4 107 28-142 196-304 (425)
133 PRK08306 dipicolinate synthase 99.0 6.8E-08 1.5E-12 75.6 15.6 110 42-158 151-260 (296)
134 TIGR00561 pntA NAD(P) transhyd 99.0 2.1E-08 4.6E-13 83.0 13.3 121 41-162 162-313 (511)
135 PLN02494 adenosylhomocysteinas 98.9 4.7E-08 1E-12 79.8 13.9 102 31-140 241-344 (477)
136 TIGR00518 alaDH alanine dehydr 98.9 1.1E-07 2.3E-12 76.8 14.8 100 42-141 166-271 (370)
137 cd05213 NAD_bind_Glutamyl_tRNA 98.8 2.5E-08 5.5E-13 78.7 8.6 108 7-119 140-251 (311)
138 TIGR00936 ahcY adenosylhomocys 98.8 1.3E-07 2.8E-12 76.5 12.4 102 31-140 182-285 (406)
139 PRK12771 putative glutamate sy 98.7 9.4E-08 2E-12 81.6 8.7 119 40-160 134-275 (564)
140 TIGR02853 spore_dpaA dipicolin 98.5 2.6E-06 5.7E-11 66.4 12.8 99 42-145 150-248 (287)
141 PF01488 Shikimate_DH: Shikima 98.5 5.4E-07 1.2E-11 62.3 6.2 96 41-139 10-111 (135)
142 PRK00045 hemA glutamyl-tRNA re 98.4 5.7E-07 1.2E-11 74.0 6.9 106 9-119 146-255 (423)
143 PTZ00075 Adenosylhomocysteinas 98.4 3.5E-06 7.5E-11 69.3 10.9 93 40-140 251-344 (476)
144 COG4221 Short-chain alcohol de 98.3 6.7E-06 1.4E-10 61.4 8.4 75 42-116 5-91 (246)
145 TIGR01035 hemA glutamyl-tRNA r 98.2 1.1E-05 2.3E-10 66.4 10.1 75 41-119 178-253 (417)
146 COG1748 LYS9 Saccharopine dehy 98.2 1.8E-05 4E-10 63.6 10.0 97 44-140 2-102 (389)
147 PRK08324 short chain dehydroge 98.2 1.7E-05 3.7E-10 69.3 10.1 75 42-116 421-508 (681)
148 PF13460 NAD_binding_10: NADH( 98.1 1.7E-05 3.7E-10 57.6 8.3 92 46-140 1-100 (183)
149 COG3967 DltE Short-chain dehyd 98.1 1.3E-05 2.8E-10 58.2 7.1 75 42-116 4-88 (245)
150 PLN03209 translocon at the inn 98.1 4.1E-05 8.8E-10 64.6 11.2 78 40-117 77-170 (576)
151 PRK12742 oxidoreductase; Provi 98.1 5.8E-05 1.3E-09 57.1 10.9 75 42-116 5-85 (237)
152 PF02826 2-Hacid_dh_C: D-isome 98.1 2.6E-05 5.6E-10 56.6 8.4 121 41-193 34-160 (178)
153 COG2518 Pcm Protein-L-isoaspar 98.1 4E-05 8.6E-10 56.2 8.9 98 37-138 67-170 (209)
154 cd01080 NAD_bind_m-THF_DH_Cycl 98.1 8.4E-05 1.8E-09 53.2 10.4 100 18-140 19-119 (168)
155 PF00670 AdoHcyase_NAD: S-aden 98.1 7.4E-05 1.6E-09 52.7 9.8 96 38-141 18-114 (162)
156 COG0686 Ald Alanine dehydrogen 98.0 4.2E-05 9.1E-10 59.0 8.8 99 43-141 168-272 (371)
157 PRK05786 fabG 3-ketoacyl-(acyl 98.0 7.2E-05 1.6E-09 56.6 10.2 99 42-140 4-138 (238)
158 PRK11705 cyclopropane fatty ac 98.0 0.00015 3.4E-09 58.9 12.1 114 21-138 146-268 (383)
159 COG0300 DltE Short-chain dehyd 98.0 3.7E-05 8.1E-10 58.7 7.5 77 41-117 4-95 (265)
160 PRK00377 cbiT cobalt-precorrin 98.0 0.00016 3.6E-09 53.3 10.8 97 39-136 37-144 (198)
161 PF12847 Methyltransf_18: Meth 98.0 7.1E-05 1.5E-09 49.7 8.1 94 42-136 1-110 (112)
162 COG2230 Cfa Cyclopropane fatty 98.0 2.7E-05 5.9E-10 59.8 6.6 111 28-140 58-179 (283)
163 cd01078 NAD_bind_H4MPT_DH NADP 98.0 0.00025 5.4E-09 52.2 11.5 77 42-118 27-109 (194)
164 PRK00517 prmA ribosomal protei 98.0 0.0001 2.2E-09 56.5 9.7 124 4-139 85-215 (250)
165 PRK14175 bifunctional 5,10-met 97.9 0.00017 3.6E-09 55.9 10.5 97 21-140 136-233 (286)
166 PRK06182 short chain dehydroge 97.9 0.00022 4.8E-09 55.2 11.4 74 42-116 2-84 (273)
167 PRK13940 glutamyl-tRNA reducta 97.9 0.00013 2.8E-09 59.8 10.2 76 41-119 179-255 (414)
168 COG2242 CobL Precorrin-6B meth 97.9 0.00029 6.3E-09 50.7 10.3 96 40-137 32-135 (187)
169 PF03435 Saccharop_dh: Sacchar 97.8 0.00012 2.6E-09 59.8 9.1 92 46-137 1-98 (386)
170 cd01065 NAD_bind_Shikimate_DH 97.8 0.00026 5.6E-09 50.0 9.7 105 32-139 8-118 (155)
171 COG0373 HemA Glutamyl-tRNA red 97.8 0.00018 4E-09 58.3 9.8 96 41-140 176-277 (414)
172 PRK08265 short chain dehydroge 97.8 0.00038 8.3E-09 53.6 11.4 75 42-116 5-90 (261)
173 PRK08261 fabG 3-ketoacyl-(acyl 97.8 0.00028 6E-09 58.8 11.3 75 42-116 209-294 (450)
174 KOG1209 1-Acyl dihydroxyaceton 97.8 0.00034 7.3E-09 51.3 9.9 106 42-147 6-148 (289)
175 PRK05993 short chain dehydroge 97.8 0.00042 9E-09 53.9 11.2 74 42-116 3-86 (277)
176 PRK12548 shikimate 5-dehydroge 97.8 0.00027 5.8E-09 55.4 10.1 76 41-116 124-209 (289)
177 PRK05872 short chain dehydroge 97.8 0.00018 4E-09 56.5 9.2 75 42-116 8-95 (296)
178 TIGR01809 Shik-DH-AROM shikima 97.8 9.5E-05 2.1E-09 57.7 7.4 76 42-117 124-201 (282)
179 PRK08618 ornithine cyclodeamin 97.8 0.00028 6E-09 56.3 10.2 101 41-147 125-232 (325)
180 PRK07060 short chain dehydroge 97.8 0.00021 4.5E-09 54.3 9.2 75 42-116 8-87 (245)
181 KOG1205 Predicted dehydrogenas 97.8 0.00023 5E-09 54.9 9.3 107 41-147 10-159 (282)
182 PRK06057 short chain dehydroge 97.8 0.00024 5.3E-09 54.4 9.4 75 42-116 6-89 (255)
183 PRK08339 short chain dehydroge 97.8 0.00069 1.5E-08 52.3 11.9 75 42-116 7-95 (263)
184 COG0169 AroE Shikimate 5-dehyd 97.8 0.00016 3.5E-09 56.0 8.2 87 30-117 111-201 (283)
185 PRK00258 aroE shikimate 5-dehy 97.8 0.00026 5.6E-09 55.2 9.3 95 41-137 121-221 (278)
186 PRK06139 short chain dehydroge 97.8 0.00026 5.6E-09 56.6 9.5 75 42-116 6-94 (330)
187 PRK07109 short chain dehydroge 97.7 0.00079 1.7E-08 53.9 11.7 75 42-116 7-95 (334)
188 TIGR01470 cysG_Nterm siroheme 97.7 0.00046 9.9E-09 51.2 9.6 115 42-160 8-124 (205)
189 PRK12939 short chain dehydroge 97.7 0.00059 1.3E-08 52.0 10.4 76 41-116 5-94 (250)
190 PRK12549 shikimate 5-dehydroge 97.7 0.00018 3.9E-09 56.2 7.5 72 41-115 125-201 (284)
191 PRK12829 short chain dehydroge 97.7 0.00035 7.7E-09 53.7 9.1 77 41-117 9-97 (264)
192 PRK14192 bifunctional 5,10-met 97.7 0.00075 1.6E-08 52.5 10.7 94 24-140 140-234 (283)
193 PRK12367 short chain dehydroge 97.7 0.00037 8.1E-09 53.3 8.9 75 42-116 13-89 (245)
194 PLN00203 glutamyl-tRNA reducta 97.7 0.00064 1.4E-08 57.3 10.8 98 42-140 265-372 (519)
195 PRK06484 short chain dehydroge 97.7 0.00099 2.1E-08 56.6 12.2 99 42-140 268-403 (520)
196 PRK07806 short chain dehydroge 97.7 0.00067 1.5E-08 51.7 10.2 97 42-138 5-135 (248)
197 PF13241 NAD_binding_7: Putati 97.7 0.00048 1E-08 45.2 8.0 90 42-141 6-95 (103)
198 PF01135 PCMT: Protein-L-isoas 97.6 0.00021 4.6E-09 53.1 6.8 98 38-136 68-171 (209)
199 PRK05866 short chain dehydroge 97.6 0.00029 6.3E-09 55.3 8.0 75 42-116 39-127 (293)
200 TIGR02469 CbiT precorrin-6Y C5 97.6 0.0013 2.7E-08 44.4 10.2 97 40-137 17-122 (124)
201 PF02353 CMAS: Mycolic acid cy 97.6 6.9E-05 1.5E-09 58.0 4.3 97 36-136 56-165 (273)
202 PRK05693 short chain dehydroge 97.6 0.00053 1.2E-08 53.2 9.3 72 44-116 2-82 (274)
203 PRK07340 ornithine cyclodeamin 97.6 0.00077 1.7E-08 53.2 10.2 107 41-154 123-234 (304)
204 PRK06141 ornithine cyclodeamin 97.6 0.0021 4.5E-08 51.0 12.6 95 41-140 123-222 (314)
205 PRK07825 short chain dehydroge 97.6 0.00049 1.1E-08 53.3 8.9 75 42-116 4-88 (273)
206 PRK06200 2,3-dihydroxy-2,3-dih 97.6 0.00051 1.1E-08 52.9 8.9 75 42-116 5-90 (263)
207 PRK13943 protein-L-isoaspartat 97.6 0.0011 2.3E-08 52.6 10.6 97 39-136 77-179 (322)
208 PRK07814 short chain dehydroge 97.6 0.00046 1E-08 53.2 8.5 75 42-116 9-97 (263)
209 TIGR00406 prmA ribosomal prote 97.6 0.001 2.2E-08 52.1 10.3 98 40-139 157-261 (288)
210 TIGR02992 ectoine_eutC ectoine 97.6 0.00079 1.7E-08 53.7 9.8 95 41-140 127-227 (326)
211 PRK14027 quinate/shikimate deh 97.6 0.00073 1.6E-08 52.7 9.3 75 41-116 125-204 (283)
212 PRK12429 3-hydroxybutyrate deh 97.6 0.0017 3.6E-08 49.7 11.3 75 42-116 3-91 (258)
213 PRK06500 short chain dehydroge 97.6 0.00077 1.7E-08 51.3 9.4 75 42-116 5-90 (249)
214 cd01075 NAD_bind_Leu_Phe_Val_D 97.6 0.0017 3.8E-08 48.0 10.8 80 41-127 26-106 (200)
215 PRK12749 quinate/shikimate deh 97.6 0.0011 2.4E-08 51.8 10.2 86 31-116 112-206 (288)
216 PF01262 AlaDh_PNT_C: Alanine 97.6 0.00022 4.7E-09 51.3 5.8 97 43-140 20-142 (168)
217 COG1052 LdhA Lactate dehydroge 97.6 0.002 4.3E-08 51.2 11.6 136 41-212 144-287 (324)
218 PRK07574 formate dehydrogenase 97.6 0.0031 6.7E-08 51.3 12.9 90 42-138 191-285 (385)
219 PRK07063 short chain dehydroge 97.6 0.00054 1.2E-08 52.7 8.3 75 42-116 6-96 (260)
220 PRK07062 short chain dehydroge 97.6 0.00058 1.3E-08 52.6 8.5 75 42-116 7-97 (265)
221 TIGR02356 adenyl_thiF thiazole 97.5 0.00032 6.9E-09 52.0 6.6 34 42-75 20-54 (202)
222 TIGR03325 BphB_TodD cis-2,3-di 97.5 0.00083 1.8E-08 51.7 9.2 75 42-116 4-89 (262)
223 PRK07424 bifunctional sterol d 97.5 0.00089 1.9E-08 54.9 9.6 75 42-116 177-255 (406)
224 PRK07832 short chain dehydroge 97.5 0.002 4.4E-08 49.9 11.3 72 45-116 2-88 (272)
225 PRK06196 oxidoreductase; Provi 97.5 0.00077 1.7E-08 53.5 9.1 75 42-116 25-109 (315)
226 PRK12809 putative oxidoreducta 97.5 0.00051 1.1E-08 59.8 8.5 76 42-117 309-406 (639)
227 cd05311 NAD_bind_2_malic_enz N 97.5 0.0026 5.6E-08 48.0 11.1 102 31-137 13-128 (226)
228 PRK07231 fabG 3-ketoacyl-(acyl 97.5 0.00075 1.6E-08 51.4 8.5 75 42-116 4-91 (251)
229 PRK06180 short chain dehydroge 97.5 0.001 2.2E-08 51.7 9.3 75 42-116 3-88 (277)
230 PRK03369 murD UDP-N-acetylmura 97.5 0.0011 2.4E-08 55.8 10.0 72 40-117 9-81 (488)
231 PLN03139 formate dehydrogenase 97.5 0.003 6.5E-08 51.3 12.0 90 42-138 198-292 (386)
232 PRK07576 short chain dehydroge 97.5 0.00056 1.2E-08 52.8 7.7 76 41-116 7-96 (264)
233 PRK05867 short chain dehydroge 97.5 0.00073 1.6E-08 51.7 8.2 75 42-116 8-96 (253)
234 PRK15469 ghrA bifunctional gly 97.5 0.0023 4.9E-08 50.7 11.1 88 42-138 135-227 (312)
235 PRK06949 short chain dehydroge 97.5 0.00074 1.6E-08 51.7 8.2 76 41-116 7-96 (258)
236 PRK07326 short chain dehydroge 97.5 0.00075 1.6E-08 51.0 8.1 75 42-116 5-92 (237)
237 TIGR00507 aroE shikimate 5-deh 97.5 0.00092 2E-08 51.9 8.6 103 31-138 105-215 (270)
238 PRK06718 precorrin-2 dehydroge 97.5 0.00038 8.3E-09 51.5 6.1 114 42-160 9-124 (202)
239 TIGR01318 gltD_gamma_fam gluta 97.5 0.00058 1.3E-08 57.2 8.0 77 42-118 140-238 (467)
240 PRK05717 oxidoreductase; Valid 97.5 0.0012 2.6E-08 50.6 9.2 76 41-116 8-94 (255)
241 PRK09291 short chain dehydroge 97.5 0.001 2.2E-08 50.9 8.8 74 43-116 2-83 (257)
242 PRK12550 shikimate 5-dehydroge 97.5 0.0011 2.5E-08 51.3 8.9 80 28-116 108-188 (272)
243 PRK07523 gluconate 5-dehydroge 97.5 0.00091 2E-08 51.2 8.5 75 42-116 9-97 (255)
244 PRK10792 bifunctional 5,10-met 97.5 0.0014 3.1E-08 50.7 9.3 95 22-139 138-233 (285)
245 PRK05854 short chain dehydroge 97.5 0.00075 1.6E-08 53.5 8.1 75 42-116 13-103 (313)
246 PRK06194 hypothetical protein; 97.5 0.00089 1.9E-08 52.2 8.5 75 42-116 5-93 (287)
247 PRK07831 short chain dehydroge 97.4 0.0015 3.3E-08 50.3 9.6 77 40-116 14-107 (262)
248 PRK06483 dihydromonapterin red 97.4 0.0014 2.9E-08 49.6 9.2 74 43-116 2-84 (236)
249 PRK13942 protein-L-isoaspartat 97.4 0.0026 5.6E-08 47.5 10.4 98 37-136 71-175 (212)
250 PRK06484 short chain dehydroge 97.4 0.001 2.2E-08 56.5 9.3 76 41-116 3-89 (520)
251 PLN02253 xanthoxin dehydrogena 97.4 0.0013 2.8E-08 51.1 9.1 75 42-116 17-104 (280)
252 PRK14189 bifunctional 5,10-met 97.4 0.0023 4.9E-08 49.7 10.1 96 22-140 137-233 (285)
253 PRK07890 short chain dehydroge 97.4 0.00087 1.9E-08 51.3 8.0 76 41-116 3-92 (258)
254 PRK08217 fabG 3-ketoacyl-(acyl 97.4 0.0014 3.1E-08 49.9 9.1 75 42-116 4-92 (253)
255 PRK12828 short chain dehydroge 97.4 0.001 2.2E-08 50.2 8.2 75 42-116 6-92 (239)
256 PRK08263 short chain dehydroge 97.4 0.0034 7.3E-08 48.7 11.2 74 43-116 3-87 (275)
257 TIGR03840 TMPT_Se_Te thiopurin 97.4 0.0012 2.6E-08 49.3 8.2 97 41-139 33-154 (213)
258 PRK07478 short chain dehydroge 97.4 0.0012 2.5E-08 50.6 8.4 75 42-116 5-93 (254)
259 PRK06128 oxidoreductase; Provi 97.4 0.0048 1E-07 48.6 12.0 99 42-140 54-194 (300)
260 PRK05876 short chain dehydroge 97.4 0.0011 2.4E-08 51.6 8.3 75 42-116 5-93 (275)
261 PRK09242 tropinone reductase; 97.4 0.0011 2.4E-08 50.9 8.2 75 42-116 8-98 (257)
262 PRK12475 thiamine/molybdopteri 97.4 0.00081 1.8E-08 53.8 7.6 77 42-118 23-128 (338)
263 PRK09186 flagellin modificatio 97.4 0.0012 2.6E-08 50.5 8.3 74 42-115 3-92 (256)
264 PRK07453 protochlorophyllide o 97.4 0.001 2.2E-08 52.9 8.1 74 42-115 5-92 (322)
265 PRK14194 bifunctional 5,10-met 97.4 0.0025 5.4E-08 49.8 9.8 96 21-139 137-233 (301)
266 PRK05884 short chain dehydroge 97.4 0.0014 3.1E-08 49.2 8.4 71 45-115 2-78 (223)
267 PRK14191 bifunctional 5,10-met 97.4 0.0025 5.3E-08 49.4 9.7 96 21-139 135-231 (285)
268 PRK07677 short chain dehydroge 97.4 0.0012 2.7E-08 50.4 8.2 74 43-116 1-88 (252)
269 PLN02928 oxidoreductase family 97.4 0.0032 7E-08 50.6 10.8 95 42-138 158-263 (347)
270 PRK06719 precorrin-2 dehydroge 97.4 0.0034 7.3E-08 44.5 9.7 114 41-161 11-125 (157)
271 PRK14982 acyl-ACP reductase; P 97.4 0.0021 4.6E-08 51.2 9.5 94 41-140 153-249 (340)
272 PF03807 F420_oxidored: NADP o 97.4 0.0022 4.9E-08 41.3 8.2 86 45-136 1-93 (96)
273 PRK13944 protein-L-isoaspartat 97.4 0.0032 6.9E-08 46.8 10.0 96 39-136 69-172 (205)
274 PRK06125 short chain dehydroge 97.4 0.0013 2.8E-08 50.5 8.2 75 42-116 6-91 (259)
275 PRK13243 glyoxylate reductase; 97.4 0.0042 9.1E-08 49.7 11.2 88 42-138 149-241 (333)
276 CHL00194 ycf39 Ycf39; Provisio 97.3 0.0015 3.3E-08 51.8 8.7 71 45-116 2-74 (317)
277 PRK08177 short chain dehydroge 97.3 0.0018 4E-08 48.6 8.7 72 44-116 2-81 (225)
278 PRK06138 short chain dehydroge 97.3 0.0013 2.9E-08 50.1 7.9 75 42-116 4-91 (252)
279 PRK08291 ectoine utilization p 97.3 0.0035 7.6E-08 50.1 10.5 95 41-140 130-230 (330)
280 PRK04148 hypothetical protein; 97.3 0.007 1.5E-07 41.4 10.4 88 41-131 15-102 (134)
281 PRK07024 short chain dehydroge 97.3 0.0022 4.8E-08 49.2 9.1 74 43-116 2-88 (257)
282 PRK08644 thiamine biosynthesis 97.3 0.0011 2.4E-08 49.5 7.0 34 42-75 27-61 (212)
283 PRK06505 enoyl-(acyl carrier p 97.3 0.0023 5E-08 49.6 9.1 75 42-116 6-95 (271)
284 PRK08267 short chain dehydroge 97.3 0.0014 3E-08 50.4 7.8 73 44-116 2-87 (260)
285 PRK07774 short chain dehydroge 97.3 0.0019 4.2E-08 49.1 8.5 75 42-116 5-93 (250)
286 PRK08594 enoyl-(acyl carrier p 97.3 0.0071 1.5E-07 46.5 11.7 75 42-116 6-97 (257)
287 PRK08643 acetoin reductase; Va 97.3 0.0016 3.5E-08 49.9 8.1 74 43-116 2-89 (256)
288 PRK08213 gluconate 5-dehydroge 97.3 0.0018 3.9E-08 49.7 8.4 76 41-116 10-99 (259)
289 PRK06463 fabG 3-ketoacyl-(acyl 97.3 0.0028 6E-08 48.6 9.4 75 42-116 6-89 (255)
290 PRK07067 sorbitol dehydrogenas 97.3 0.0022 4.7E-08 49.2 8.8 75 42-116 5-90 (257)
291 PRK08589 short chain dehydroge 97.3 0.0019 4E-08 50.1 8.4 74 42-116 5-92 (272)
292 TIGR00080 pimt protein-L-isoas 97.3 0.0026 5.6E-08 47.6 8.9 98 38-136 73-176 (215)
293 PRK09072 short chain dehydroge 97.3 0.0021 4.5E-08 49.5 8.6 75 42-116 4-90 (263)
294 PRK08862 short chain dehydroge 97.3 0.0023 5E-08 48.3 8.7 74 42-115 4-92 (227)
295 PF05368 NmrA: NmrA-like famil 97.3 0.0018 4E-08 48.9 8.2 71 46-116 1-74 (233)
296 PRK07402 precorrin-6B methylas 97.3 0.0091 2E-07 44.0 11.5 100 37-137 35-142 (196)
297 PRK07502 cyclohexadienyl dehyd 97.3 0.0033 7.1E-08 49.8 9.7 91 43-138 6-101 (307)
298 COG2910 Putative NADH-flavin r 97.3 0.0026 5.6E-08 45.7 8.0 92 45-140 2-107 (211)
299 PRK10538 malonic semialdehyde 97.3 0.0027 5.9E-08 48.4 9.0 72 45-116 2-84 (248)
300 PRK07666 fabG 3-ketoacyl-(acyl 97.3 0.0018 4E-08 49.0 7.9 75 42-116 6-94 (239)
301 PRK06181 short chain dehydroge 97.2 0.002 4.3E-08 49.5 8.1 74 43-116 1-88 (263)
302 PRK04457 spermidine synthase; 97.2 0.0072 1.6E-07 46.7 11.1 95 41-136 65-176 (262)
303 PRK07904 short chain dehydroge 97.2 0.0029 6.3E-08 48.5 9.0 77 40-116 5-97 (253)
304 PRK08762 molybdopterin biosynt 97.2 0.0023 4.9E-08 52.2 8.6 77 42-118 134-237 (376)
305 PRK06197 short chain dehydroge 97.2 0.0015 3.2E-08 51.6 7.5 76 41-116 14-105 (306)
306 PRK08017 oxidoreductase; Provi 97.2 0.0033 7.1E-08 48.1 9.2 72 44-116 3-84 (256)
307 PRK13394 3-hydroxybutyrate deh 97.2 0.0019 4E-08 49.6 7.9 75 42-116 6-94 (262)
308 TIGR02622 CDP_4_6_dhtase CDP-g 97.2 0.0028 6E-08 51.1 9.1 75 42-116 3-85 (349)
309 PRK13255 thiopurine S-methyltr 97.2 0.0016 3.5E-08 48.8 7.2 95 40-136 35-154 (218)
310 PRK05875 short chain dehydroge 97.2 0.0029 6.3E-08 49.0 8.9 75 42-116 6-96 (276)
311 PF02882 THF_DHG_CYH_C: Tetrah 97.2 0.007 1.5E-07 42.9 10.0 98 20-140 13-111 (160)
312 PRK07035 short chain dehydroge 97.2 0.0023 5E-08 48.9 8.3 75 42-116 7-95 (252)
313 PRK00107 gidB 16S rRNA methylt 97.2 0.006 1.3E-07 44.6 9.9 96 40-137 43-145 (187)
314 PLN02819 lysine-ketoglutarate 97.2 0.0034 7.4E-08 57.0 10.3 96 42-137 568-679 (1042)
315 PRK06841 short chain dehydroge 97.2 0.0036 7.7E-08 47.9 9.3 74 42-116 14-99 (255)
316 PRK14176 bifunctional 5,10-met 97.2 0.0039 8.5E-08 48.4 9.2 96 21-139 142-238 (287)
317 TIGR00438 rrmJ cell division p 97.2 0.0048 1E-07 45.1 9.5 97 36-137 26-146 (188)
318 PF10727 Rossmann-like: Rossma 97.2 0.001 2.3E-08 45.2 5.4 88 42-136 9-102 (127)
319 PRK05562 precorrin-2 dehydroge 97.2 0.005 1.1E-07 46.1 9.4 116 42-161 24-141 (223)
320 TIGR03589 PseB UDP-N-acetylglu 97.2 0.0036 7.8E-08 49.9 9.4 75 42-116 3-84 (324)
321 PRK12936 3-ketoacyl-(acyl-carr 97.2 0.0045 9.8E-08 46.9 9.5 75 42-116 5-90 (245)
322 PRK08340 glucose-1-dehydrogena 97.2 0.0025 5.4E-08 49.0 8.1 72 45-116 2-86 (259)
323 COG2226 UbiE Methylase involve 97.2 0.0077 1.7E-07 45.6 10.4 99 40-140 49-159 (238)
324 KOG1210 Predicted 3-ketosphing 97.2 0.007 1.5E-07 47.1 10.2 76 41-116 31-122 (331)
325 PLN02896 cinnamyl-alcohol dehy 97.2 0.0032 6.9E-08 50.8 9.0 76 41-116 8-89 (353)
326 PRK12480 D-lactate dehydrogena 97.2 0.0078 1.7E-07 48.1 11.0 86 42-138 145-235 (330)
327 PRK15181 Vi polysaccharide bio 97.2 0.0043 9.4E-08 49.9 9.7 87 29-116 2-100 (348)
328 PRK14188 bifunctional 5,10-met 97.2 0.0047 1E-07 48.3 9.5 95 22-140 137-233 (296)
329 PLN02989 cinnamyl-alcohol dehy 97.2 0.0028 6E-08 50.4 8.5 75 42-116 4-87 (325)
330 PRK12481 2-deoxy-D-gluconate 3 97.2 0.0041 8.9E-08 47.6 9.2 75 42-116 7-93 (251)
331 PRK08085 gluconate 5-dehydroge 97.2 0.0025 5.5E-08 48.7 8.0 75 42-116 8-96 (254)
332 PRK06482 short chain dehydroge 97.2 0.0036 7.8E-08 48.5 9.0 73 44-116 3-86 (276)
333 PRK08415 enoyl-(acyl carrier p 97.2 0.0032 7E-08 48.9 8.6 99 42-140 4-146 (274)
334 cd01487 E1_ThiF_like E1_ThiF_l 97.2 0.0025 5.5E-08 46.0 7.4 32 45-76 1-33 (174)
335 PRK12826 3-ketoacyl-(acyl-carr 97.2 0.0027 6E-08 48.2 8.1 75 42-116 5-93 (251)
336 PRK07688 thiamine/molybdopteri 97.2 0.002 4.3E-08 51.6 7.4 77 42-118 23-128 (339)
337 PRK10258 biotin biosynthesis p 97.2 0.018 4E-07 44.1 12.6 155 41-202 41-204 (251)
338 KOG1201 Hydroxysteroid 17-beta 97.2 0.0034 7.4E-08 48.5 8.3 75 42-116 37-124 (300)
339 PRK06172 short chain dehydroge 97.1 0.0022 4.8E-08 49.0 7.4 75 42-116 6-94 (253)
340 PRK06935 2-deoxy-D-gluconate 3 97.1 0.0033 7.2E-08 48.2 8.4 74 42-116 14-101 (258)
341 cd05211 NAD_bind_Glu_Leu_Phe_V 97.1 0.0054 1.2E-07 45.9 9.1 37 41-77 21-57 (217)
342 PRK07097 gluconate 5-dehydroge 97.1 0.0034 7.3E-08 48.4 8.3 75 42-116 9-97 (265)
343 PRK07985 oxidoreductase; Provi 97.1 0.012 2.5E-07 46.3 11.4 76 41-116 47-138 (294)
344 PF00106 adh_short: short chai 97.1 0.0018 4E-08 46.0 6.3 74 44-117 1-91 (167)
345 PRK07074 short chain dehydroge 97.1 0.0039 8.4E-08 47.8 8.5 74 43-116 2-87 (257)
346 PRK06932 glycerate dehydrogena 97.1 0.0042 9.2E-08 49.3 8.8 84 42-138 146-234 (314)
347 PLN02986 cinnamyl-alcohol dehy 97.1 0.0042 9.2E-08 49.3 8.9 75 42-116 4-87 (322)
348 TIGR02354 thiF_fam2 thiamine b 97.1 0.0025 5.5E-08 47.1 7.0 34 42-75 20-54 (200)
349 COG1648 CysG Siroheme synthase 97.1 0.015 3.2E-07 43.3 11.1 118 41-162 10-129 (210)
350 TIGR01832 kduD 2-deoxy-D-gluco 97.1 0.0048 1E-07 47.0 8.8 75 42-116 4-90 (248)
351 PRK08159 enoyl-(acyl carrier p 97.1 0.0041 8.9E-08 48.3 8.5 77 40-116 7-98 (272)
352 PRK08251 short chain dehydroge 97.1 0.0036 7.9E-08 47.6 8.2 74 43-116 2-91 (248)
353 PRK12937 short chain dehydroge 97.1 0.022 4.8E-07 43.1 12.5 75 42-116 4-93 (245)
354 COG0111 SerA Phosphoglycerate 97.1 0.0038 8.2E-08 49.6 8.3 120 43-194 142-267 (324)
355 PRK06198 short chain dehydroge 97.1 0.0035 7.6E-08 48.1 8.1 76 41-116 4-94 (260)
356 PRK08410 2-hydroxyacid dehydro 97.1 0.012 2.6E-07 46.7 11.1 85 42-138 144-233 (311)
357 COG2227 UbiG 2-polyprenyl-3-me 97.1 0.0045 9.7E-08 46.4 8.1 93 42-138 59-162 (243)
358 PRK08264 short chain dehydroge 97.1 0.0037 7.9E-08 47.3 8.0 71 42-116 5-83 (238)
359 PRK06113 7-alpha-hydroxysteroi 97.1 0.0035 7.5E-08 48.0 7.9 75 42-116 10-98 (255)
360 PRK07533 enoyl-(acyl carrier p 97.1 0.006 1.3E-07 46.9 9.3 75 42-116 9-98 (258)
361 COG2264 PrmA Ribosomal protein 97.1 0.0045 9.8E-08 48.3 8.4 127 6-140 130-266 (300)
362 PRK06124 gluconate 5-dehydroge 97.1 0.0036 7.9E-08 47.9 8.0 76 41-116 9-98 (256)
363 PLN02780 ketoreductase/ oxidor 97.1 0.0028 6.1E-08 50.5 7.5 75 42-116 52-142 (320)
364 PRK06720 hypothetical protein; 97.1 0.0051 1.1E-07 44.2 8.2 75 42-116 15-103 (169)
365 PRK08277 D-mannonate oxidoredu 97.1 0.0041 8.8E-08 48.3 8.3 75 42-116 9-97 (278)
366 PRK12747 short chain dehydroge 97.1 0.01 2.2E-07 45.3 10.4 100 42-141 3-148 (252)
367 PRK06940 short chain dehydroge 97.1 0.0051 1.1E-07 47.8 8.8 73 43-116 2-86 (275)
368 PRK07454 short chain dehydroge 97.1 0.0044 9.5E-08 47.0 8.3 76 41-116 4-93 (241)
369 PRK08703 short chain dehydroge 97.1 0.0054 1.2E-07 46.4 8.8 75 42-116 5-97 (239)
370 PF01408 GFO_IDH_MocA: Oxidore 97.1 0.0095 2.1E-07 39.9 9.1 87 45-135 2-91 (120)
371 PRK12769 putative oxidoreducta 97.1 0.0028 6E-08 55.5 8.0 77 41-117 325-423 (654)
372 PRK06179 short chain dehydroge 97.1 0.0037 8E-08 48.3 7.9 72 42-116 3-83 (270)
373 COG2423 Predicted ornithine cy 97.0 0.0085 1.8E-07 47.6 9.9 99 41-140 128-228 (330)
374 PRK08328 hypothetical protein; 97.0 0.0031 6.7E-08 47.8 7.2 34 42-75 26-60 (231)
375 PRK13656 trans-2-enoyl-CoA red 97.0 0.021 4.5E-07 46.3 12.1 76 41-117 39-142 (398)
376 PRK06603 enoyl-(acyl carrier p 97.0 0.0051 1.1E-07 47.3 8.6 76 41-116 6-96 (260)
377 cd05212 NAD_bind_m-THF_DH_Cycl 97.0 0.02 4.3E-07 39.7 10.6 96 22-140 7-103 (140)
378 PRK06436 glycerate dehydrogena 97.0 0.011 2.5E-07 46.5 10.5 85 42-138 121-210 (303)
379 PRK06079 enoyl-(acyl carrier p 97.0 0.0052 1.1E-07 47.1 8.4 75 41-116 5-93 (252)
380 PRK06823 ornithine cyclodeamin 97.0 0.035 7.6E-07 44.1 13.2 103 41-148 126-234 (315)
381 PRK08628 short chain dehydroge 97.0 0.0039 8.4E-08 47.8 7.7 75 41-116 5-93 (258)
382 PRK06914 short chain dehydroge 97.0 0.0045 9.7E-08 48.1 8.1 75 42-116 2-91 (280)
383 PRK05650 short chain dehydroge 97.0 0.0047 1E-07 47.8 8.2 72 45-116 2-87 (270)
384 PLN03075 nicotianamine synthas 97.0 0.0073 1.6E-07 47.2 9.0 97 41-137 122-233 (296)
385 PLN02657 3,8-divinyl protochlo 97.0 0.0052 1.1E-07 50.4 8.7 76 41-116 58-146 (390)
386 smart00846 Gp_dh_N Glyceraldeh 97.0 0.017 3.7E-07 40.6 10.1 96 45-140 2-121 (149)
387 PRK13581 D-3-phosphoglycerate 97.0 0.017 3.7E-07 49.2 12.0 88 42-138 139-231 (526)
388 PRK12384 sorbitol-6-phosphate 97.0 0.0046 1E-07 47.4 7.9 74 43-116 2-91 (259)
389 PRK09135 pteridine reductase; 97.0 0.0055 1.2E-07 46.5 8.3 75 42-116 5-95 (249)
390 PRK07791 short chain dehydroge 97.0 0.0052 1.1E-07 48.1 8.3 76 41-116 4-102 (286)
391 PRK07775 short chain dehydroge 97.0 0.0076 1.7E-07 46.7 9.2 75 42-116 9-97 (274)
392 TIGR02355 moeB molybdopterin s 97.0 0.004 8.6E-08 47.4 7.3 34 43-76 24-58 (240)
393 PF00899 ThiF: ThiF family; I 97.0 0.009 2E-07 41.2 8.6 92 43-134 2-120 (135)
394 TIGR01963 PHB_DH 3-hydroxybuty 97.0 0.0056 1.2E-07 46.7 8.3 74 43-116 1-88 (255)
395 PRK05565 fabG 3-ketoacyl-(acyl 97.0 0.005 1.1E-07 46.7 8.0 74 43-116 5-93 (247)
396 TIGR01532 E4PD_g-proteo D-eryt 97.0 0.0073 1.6E-07 48.0 8.9 95 45-139 1-122 (325)
397 TIGR01289 LPOR light-dependent 97.0 0.006 1.3E-07 48.4 8.6 74 43-116 3-91 (314)
398 PRK05690 molybdopterin biosynt 97.0 0.0087 1.9E-07 45.8 9.0 34 42-75 31-65 (245)
399 cd01483 E1_enzyme_family Super 97.0 0.0045 9.8E-08 43.1 7.0 31 45-75 1-32 (143)
400 PRK14178 bifunctional 5,10-met 97.0 0.014 2.9E-07 45.3 10.0 96 22-140 131-227 (279)
401 COG1179 Dinucleotide-utilizing 97.0 0.0042 9.1E-08 46.6 6.9 99 42-140 29-156 (263)
402 PRK15409 bifunctional glyoxyla 97.0 0.018 3.9E-07 45.9 11.1 88 42-138 144-237 (323)
403 KOG1199 Short-chain alcohol de 97.0 0.0085 1.8E-07 42.6 8.1 77 41-117 7-94 (260)
404 PRK06487 glycerate dehydrogena 97.0 0.014 3E-07 46.4 10.4 83 42-138 147-234 (317)
405 PRK14179 bifunctional 5,10-met 96.9 0.011 2.4E-07 45.9 9.5 96 22-140 137-233 (284)
406 PRK05597 molybdopterin biosynt 96.9 0.0046 1E-07 49.9 7.8 35 42-76 27-62 (355)
407 PLN00141 Tic62-NAD(P)-related 96.9 0.0078 1.7E-07 46.1 8.7 98 42-139 16-133 (251)
408 PRK08278 short chain dehydroge 96.9 0.0071 1.5E-07 46.9 8.6 75 42-116 5-100 (273)
409 cd00757 ThiF_MoeB_HesA_family 96.9 0.0052 1.1E-07 46.4 7.5 34 42-75 20-54 (228)
410 PRK08317 hypothetical protein; 96.9 0.0068 1.5E-07 45.8 8.3 100 38-138 15-125 (241)
411 PF01370 Epimerase: NAD depend 96.9 0.0062 1.3E-07 45.8 8.0 72 46-117 1-76 (236)
412 PRK05653 fabG 3-ketoacyl-(acyl 96.9 0.005 1.1E-07 46.6 7.5 75 42-116 4-92 (246)
413 PRK06114 short chain dehydroge 96.9 0.0084 1.8E-07 45.9 8.7 75 42-116 7-96 (254)
414 PRK07889 enoyl-(acyl carrier p 96.9 0.0093 2E-07 45.8 8.9 75 42-116 6-95 (256)
415 PRK07102 short chain dehydroge 96.9 0.0063 1.4E-07 46.2 7.9 73 44-116 2-86 (243)
416 PRK08416 7-alpha-hydroxysteroi 96.9 0.0059 1.3E-07 46.9 7.8 74 42-115 7-96 (260)
417 PRK01438 murD UDP-N-acetylmura 96.9 0.014 2.9E-07 49.3 10.5 72 41-117 14-89 (480)
418 PRK05600 thiamine biosynthesis 96.9 0.0044 9.5E-08 50.3 7.2 34 42-75 40-74 (370)
419 PRK12823 benD 1,6-dihydroxycyc 96.9 0.01 2.3E-07 45.4 9.1 74 42-116 7-94 (260)
420 TIGR03206 benzo_BadH 2-hydroxy 96.9 0.0073 1.6E-07 46.0 8.2 75 42-116 2-90 (250)
421 PRK09310 aroDE bifunctional 3- 96.9 0.011 2.3E-07 49.8 9.7 84 30-118 319-402 (477)
422 PLN02662 cinnamyl-alcohol dehy 96.9 0.0076 1.7E-07 47.8 8.5 75 42-116 3-86 (322)
423 PRK07856 short chain dehydroge 96.9 0.0045 9.8E-08 47.3 7.0 72 42-116 5-85 (252)
424 PRK06398 aldose dehydrogenase; 96.9 0.0058 1.3E-07 47.0 7.6 69 42-116 5-82 (258)
425 PF02719 Polysacc_synt_2: Poly 96.9 0.0032 7E-08 49.0 6.1 72 46-117 1-88 (293)
426 PF01118 Semialdhyde_dh: Semia 96.9 0.005 1.1E-07 41.6 6.4 90 45-138 1-98 (121)
427 PRK06101 short chain dehydroge 96.9 0.0089 1.9E-07 45.4 8.5 72 44-115 2-80 (240)
428 PRK08690 enoyl-(acyl carrier p 96.9 0.0072 1.6E-07 46.6 8.1 76 41-116 4-94 (261)
429 PRK07984 enoyl-(acyl carrier p 96.9 0.01 2.2E-07 45.8 8.9 75 42-116 5-94 (262)
430 PRK08303 short chain dehydroge 96.9 0.0079 1.7E-07 47.6 8.4 74 42-115 7-105 (305)
431 KOG0725 Reductases with broad 96.9 0.0073 1.6E-07 46.8 7.9 77 41-117 6-100 (270)
432 PRK00811 spermidine synthase; 96.9 0.017 3.6E-07 45.2 10.0 95 41-136 75-190 (283)
433 PRK06953 short chain dehydroge 96.8 0.0083 1.8E-07 44.9 8.1 72 44-116 2-80 (222)
434 PLN02366 spermidine synthase 96.8 0.014 3.1E-07 46.1 9.6 96 41-137 90-206 (308)
435 PRK15116 sulfur acceptor prote 96.8 0.0065 1.4E-07 46.9 7.5 34 42-75 29-63 (268)
436 PRK13303 L-aspartate dehydroge 96.8 0.0084 1.8E-07 46.4 8.2 88 45-136 3-91 (265)
437 PRK06077 fabG 3-ketoacyl-(acyl 96.8 0.032 6.9E-07 42.4 11.4 99 42-140 5-143 (252)
438 PRK14618 NAD(P)H-dependent gly 96.8 0.0075 1.6E-07 48.2 8.2 91 44-138 5-105 (328)
439 PRK05447 1-deoxy-D-xylulose 5- 96.8 0.017 3.7E-07 46.7 10.0 93 44-136 2-121 (385)
440 PRK08605 D-lactate dehydrogena 96.8 0.028 6.1E-07 45.0 11.2 87 42-138 145-237 (332)
441 COG0334 GdhA Glutamate dehydro 96.8 0.022 4.8E-07 46.2 10.5 59 18-77 183-241 (411)
442 TIGR03466 HpnA hopanoid-associ 96.8 0.0058 1.3E-07 48.5 7.4 71 45-116 2-74 (328)
443 PRK06046 alanine dehydrogenase 96.8 0.015 3.2E-07 46.5 9.6 102 41-148 127-235 (326)
444 PRK08261 fabG 3-ketoacyl-(acyl 96.8 0.002 4.4E-08 53.7 4.9 93 37-140 28-126 (450)
445 TIGR02415 23BDH acetoin reduct 96.8 0.008 1.7E-07 45.9 7.8 73 44-116 1-87 (254)
446 PRK07577 short chain dehydroge 96.8 0.0094 2E-07 44.9 8.1 69 42-116 2-78 (234)
447 COG0569 TrkA K+ transport syst 96.8 0.011 2.4E-07 44.6 8.3 74 45-118 2-78 (225)
448 PLN02695 GDP-D-mannose-3',5'-e 96.8 0.0064 1.4E-07 49.4 7.6 75 41-116 19-95 (370)
449 PRK05479 ketol-acid reductoiso 96.8 0.02 4.3E-07 45.6 10.0 87 41-134 15-105 (330)
450 PRK08945 putative oxoacyl-(acy 96.8 0.0091 2E-07 45.4 8.0 77 40-116 9-102 (247)
451 TIGR02632 RhaD_aldol-ADH rhamn 96.8 0.0065 1.4E-07 53.4 7.9 75 42-116 413-503 (676)
452 PRK14106 murD UDP-N-acetylmura 96.8 0.012 2.6E-07 49.1 9.2 72 42-117 4-79 (450)
453 PLN02686 cinnamoyl-CoA reducta 96.8 0.0096 2.1E-07 48.4 8.4 74 41-115 51-137 (367)
454 PTZ00098 phosphoethanolamine N 96.8 0.0064 1.4E-07 47.0 7.0 105 32-139 43-158 (263)
455 PRK12938 acetyacetyl-CoA reduc 96.8 0.013 2.9E-07 44.4 8.8 75 42-116 2-91 (246)
456 PF03446 NAD_binding_2: NAD bi 96.8 0.011 2.4E-07 42.1 7.8 88 44-138 2-95 (163)
457 PRK13302 putative L-aspartate 96.8 0.012 2.7E-07 45.6 8.5 89 43-136 6-97 (271)
458 COG4122 Predicted O-methyltran 96.7 0.018 4E-07 42.9 9.0 102 38-140 55-169 (219)
459 PF02670 DXP_reductoisom: 1-de 96.7 0.041 8.8E-07 37.5 9.9 91 46-136 1-120 (129)
460 PLN02650 dihydroflavonol-4-red 96.7 0.014 3E-07 47.1 9.1 75 42-116 4-87 (351)
461 PRK12746 short chain dehydroge 96.7 0.0098 2.1E-07 45.4 8.0 75 42-116 5-100 (254)
462 PRK08993 2-deoxy-D-gluconate 3 96.7 0.016 3.5E-07 44.3 9.2 75 42-116 9-95 (253)
463 PRK10669 putative cation:proto 96.7 0.016 3.4E-07 49.9 9.9 73 44-117 418-492 (558)
464 PRK06997 enoyl-(acyl carrier p 96.7 0.0094 2E-07 45.9 7.8 75 42-116 5-94 (260)
465 PLN02214 cinnamoyl-CoA reducta 96.7 0.015 3.3E-07 46.7 9.2 76 41-116 8-91 (342)
466 PRK08063 enoyl-(acyl carrier p 96.7 0.01 2.2E-07 45.2 7.9 75 42-116 3-92 (250)
467 PLN02520 bifunctional 3-dehydr 96.7 0.0096 2.1E-07 50.7 8.4 72 42-117 378-450 (529)
468 cd00755 YgdL_like Family of ac 96.7 0.013 2.8E-07 44.4 8.2 34 43-76 11-45 (231)
469 PRK05855 short chain dehydroge 96.7 0.0077 1.7E-07 51.7 8.0 75 42-116 314-402 (582)
470 PRK07069 short chain dehydroge 96.7 0.011 2.4E-07 45.0 8.0 71 46-116 2-89 (251)
471 KOG1502 Flavonol reductase/cin 96.7 0.014 3.1E-07 46.0 8.5 75 42-116 5-88 (327)
472 PRK14190 bifunctional 5,10-met 96.7 0.021 4.7E-07 44.3 9.4 96 22-140 137-233 (284)
473 KOG1610 Corticosteroid 11-beta 96.7 0.028 6.1E-07 43.9 9.9 104 42-145 28-172 (322)
474 PRK13304 L-aspartate dehydroge 96.7 0.016 3.5E-07 44.9 8.8 86 45-136 3-91 (265)
475 PRK08226 short chain dehydroge 96.7 0.013 2.9E-07 44.9 8.5 74 42-116 5-92 (263)
476 PF02254 TrkA_N: TrkA-N domain 96.7 0.026 5.7E-07 37.6 8.9 90 46-136 1-95 (116)
477 TIGR01327 PGDH D-3-phosphoglyc 96.7 0.038 8.3E-07 47.1 11.7 89 42-138 137-230 (525)
478 PF11017 DUF2855: Protein of u 96.7 0.012 2.6E-07 46.2 8.1 94 42-140 135-234 (314)
479 KOG1200 Mitochondrial/plastidi 96.7 0.017 3.8E-07 42.0 8.1 74 43-116 14-100 (256)
480 PRK14172 bifunctional 5,10-met 96.7 0.036 7.8E-07 42.9 10.5 96 22-140 137-233 (278)
481 PRK08219 short chain dehydroge 96.7 0.015 3.3E-07 43.5 8.5 72 44-116 4-81 (227)
482 PRK14967 putative methyltransf 96.7 0.046 1E-06 41.1 11.1 93 40-136 34-158 (223)
483 PRK00312 pcm protein-L-isoaspa 96.7 0.017 3.7E-07 43.1 8.7 98 38-138 74-176 (212)
484 PRK11207 tellurite resistance 96.7 0.006 1.3E-07 45.0 6.1 95 40-137 28-134 (197)
485 PRK05557 fabG 3-ketoacyl-(acyl 96.7 0.023 4.9E-07 43.0 9.5 75 42-116 4-93 (248)
486 PLN02244 tocopherol O-methyltr 96.7 0.013 2.8E-07 47.1 8.4 97 41-138 117-224 (340)
487 PRK14177 bifunctional 5,10-met 96.7 0.035 7.5E-07 43.1 10.2 97 21-140 137-234 (284)
488 PRK03562 glutathione-regulated 96.7 0.01 2.2E-07 51.6 8.2 75 43-118 400-476 (621)
489 PF01210 NAD_Gly3P_dh_N: NAD-d 96.7 0.0076 1.7E-07 42.7 6.3 91 45-136 1-101 (157)
490 TIGR01829 AcAcCoA_reduct aceto 96.7 0.012 2.6E-07 44.5 7.9 73 44-116 1-88 (242)
491 PF02558 ApbA: Ketopantoate re 96.7 0.012 2.5E-07 41.3 7.2 91 46-138 1-102 (151)
492 PLN02427 UDP-apiose/xylose syn 96.6 0.014 3.1E-07 47.6 8.7 74 42-116 13-96 (386)
493 COG3268 Uncharacterized conser 96.6 0.0095 2.1E-07 46.8 7.0 75 43-117 6-82 (382)
494 PRK09134 short chain dehydroge 96.6 0.021 4.5E-07 43.8 9.1 75 42-116 8-97 (258)
495 PRK08642 fabG 3-ketoacyl-(acyl 96.6 0.015 3.1E-07 44.4 8.2 74 42-115 4-90 (253)
496 cd05191 NAD_bind_amino_acid_DH 96.6 0.04 8.6E-07 34.7 8.9 34 41-74 21-55 (86)
497 PRK10637 cysG siroheme synthas 96.6 0.0065 1.4E-07 50.8 6.6 117 41-161 10-128 (457)
498 TIGR00417 speE spermidine synt 96.6 0.028 6.1E-07 43.6 9.8 95 41-136 71-185 (270)
499 TIGR02371 ala_DH_arch alanine 96.6 0.024 5.2E-07 45.3 9.6 102 41-147 126-233 (325)
500 PRK04266 fibrillarin; Provisio 96.6 0.039 8.4E-07 41.7 10.1 97 39-136 69-175 (226)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=245.63 Aligned_cols=210 Identities=47% Similarity=0.710 Sum_probs=193.5
Q ss_pred CcccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 1 ~~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
+++|+.++++||+++++++||++.|++.|.|+++++.. ++||++|+|+|.|++|.+++|+|+++|++|+++++++++++
T Consensus 126 v~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~-~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e 204 (339)
T COG1064 126 VVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKAN-VKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLE 204 (339)
T ss_pred EEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHH
Confidence 46899999999999999999999999999999999865 79999999999999999999999999999999999998876
Q ss_pred HHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC-CC-CCCCchhhhcCCeEEE
Q 027664 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KP-LELPAFPLLTGRKIVG 158 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~~~ 158 (220)
.+ +++|++++++..+++..+...+.+|+++|+++ +..++.+++.|+++|+++++|... .. ..++.+.++.+++++.
T Consensus 205 ~a-~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~ 282 (339)
T COG1064 205 LA-KKLGADHVINSSDSDALEAVKEIADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIV 282 (339)
T ss_pred HH-HHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEE
Confidence 66 78999999997766666555556999999999 668999999999999999999985 44 5688888999999999
Q ss_pred EEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEeC
Q 027664 159 GSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 213 (220)
|+..++..++++++++..+|+++|.+ +.++++++++|++.|++++..||+|+++.
T Consensus 283 GS~~g~~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 283 GSLVGTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred EEecCCHHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 99999999999999999999999999 79999999999999999999999999875
No 2
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.9e-36 Score=223.69 Aligned_cols=215 Identities=60% Similarity=0.935 Sum_probs=200.2
Q ss_pred CcccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 1 ~~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
+++++.++++||++++.+.||++.|++.|+|.+|.+.+ +.||+++-|.|+|++|.+++|+||++|.+|++++++..+++
T Consensus 141 ~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g-~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kke 219 (360)
T KOG0023|consen 141 AVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSG-LGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKE 219 (360)
T ss_pred EEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcC-CCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHH
Confidence 36789999999999999999999999999999999887 78999999999977999999999999999999999998899
Q ss_pred HHHHHcCCCEEEcCC-CHHHHHHhcCCccEEEEcCC--CcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEE
Q 027664 81 EAVERLGADSFLVSR-DQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIV 157 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~-~~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (220)
++.+.||++..++.. +++.++++.+-.|.++|++. ....++.++..++.+|++|++|.+..+..++.+++..+.+.+
T Consensus 220 ea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 220 EAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSI 299 (360)
T ss_pred HHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEE
Confidence 999999999998887 67778877777788888777 555799999999999999999999888999999999999999
Q ss_pred EEEecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 027664 158 GGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 216 (220)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~ 216 (220)
.|+..+++.+.++++++.++|.+++.++..+++++++||++|++++..+|.|+++..+.
T Consensus 300 ~GS~vG~~ket~E~Ldf~a~~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~ 358 (360)
T KOG0023|consen 300 KGSIVGSRKETQEALDFVARGLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKSL 358 (360)
T ss_pred EeeccccHHHHHHHHHHHHcCCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999999999998653
No 3
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.6e-34 Score=231.85 Aligned_cols=215 Identities=72% Similarity=1.149 Sum_probs=189.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
++|++.++++|+++|+++|+++++.+.|+|+++.....+++|++|+|.|+|++|++++|+|+.+|++|++++.+++++.+
T Consensus 143 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~ 222 (360)
T PLN02586 143 VVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDE 222 (360)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhh
Confidence 57888999999999999999999999999999977766689999999999999999999999999999988888777777
Q ss_pred HHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEe
Q 027664 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSL 161 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 161 (220)
+++++|++.++++.+.+.+++..+++|++||++|....++.++++++++|+++.+|......+++...++.++..+.+++
T Consensus 223 ~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~ 302 (360)
T PLN02586 223 AINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSD 302 (360)
T ss_pred HHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcC
Confidence 77889999999877665566666689999999998667889999999999999999765556777777788888898988
Q ss_pred cCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 027664 162 IGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 216 (220)
Q Consensus 162 ~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~ 216 (220)
.++..+++.+++++++|++++.+++|+|+++++||+.+.+++..||+|+.+.+++
T Consensus 303 ~~~~~~~~~~~~li~~g~i~~~~~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~~ 357 (360)
T PLN02586 303 IGGIKETQEMLDFCAKHNITADIELIRMDEINTAMERLAKSDVRYRFVIDVANSL 357 (360)
T ss_pred cCCHHHHHHHHHHHHhCCCCCcEEEEeHHHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 8778889999999999999987788999999999999999988899999985543
No 4
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.1e-34 Score=229.29 Aligned_cols=214 Identities=65% Similarity=1.068 Sum_probs=187.6
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcC-CCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
++|++.++++|+++|+++|+++++.+.|+|+++..... .++|++|+|.|+|++|++++|+|+++|++|++++.+++++.
T Consensus 137 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~ 216 (375)
T PLN02178 137 VVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKER 216 (375)
T ss_pred EEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhH
Confidence 57888999999999999999999999999999876653 36899999999999999999999999999999888876655
Q ss_pred HHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEE
Q 027664 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGS 160 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 160 (220)
++++++|+++++++.+.+.+.+.++++|++|||+|.+..+..++++++++|+++.+|......+++...++.+++++.|+
T Consensus 217 ~~a~~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~ 296 (375)
T PLN02178 217 EAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGS 296 (375)
T ss_pred HHHHhCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEe
Confidence 66688999999987665555555568999999999876789999999999999999986555677778888899999999
Q ss_pred ecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEeCCc
Q 027664 161 LIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANT 215 (220)
Q Consensus 161 ~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 215 (220)
+.+...+++++++++++|++++.+++|+|+++++||+.+.+++..||+|+.+.++
T Consensus 297 ~~~~~~~~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 351 (375)
T PLN02178 297 QIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANS 351 (375)
T ss_pred CccCHHHHHHHHHHHHhCCCcccEEEEeHHHHHHHHHHHHcCCCceEEEEEeccc
Confidence 9888889999999999999998888899999999999999998889999998543
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.3e-34 Score=213.53 Aligned_cols=210 Identities=22% Similarity=0.272 Sum_probs=183.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
+.++++|+|+||++|++++|.+. ...++++|.++.+ +++|++|||+|+|++|+.+...||++|+ +|++++..+.|++
T Consensus 131 ~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAcr~~~-vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle 208 (354)
T KOG0024|consen 131 VHPADFCYKLPDNVSFEEGALIE-PLSVGVHACRRAG-VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLE 208 (354)
T ss_pred EechHheeeCCCCCchhhccccc-chhhhhhhhhhcC-cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHH
Confidence 56899999999999999998655 4899999998776 8999999999999999999999999999 9999999998887
Q ss_pred HHHHHcCCCEEEcCCCH---HHHHH----hcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhh
Q 027664 81 EAVERLGADSFLVSRDQ---DEMQA----AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~---~~~~~----~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (220)
.+ +++|++.+.+.... +.+.+ ..+ .+|++|||+|....++.++.+++.+|++++.|......+|+..++.
T Consensus 209 ~A-k~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~ 287 (354)
T KOG0024|consen 209 LA-KKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVA 287 (354)
T ss_pred HH-HHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhh
Confidence 76 56999988766552 22222 222 4999999999988899999999999999999988888999999999
Q ss_pred cCCeEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCC-ceeEEEEeCC
Q 027664 152 TGRKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADV-RYRFVIDVAN 214 (220)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~-~gk~vv~~~~ 214 (220)
.+++.+.|++.+...+|+.+++++++|++... + ++|+++++.|||+.+.+++. .-|+++..++
T Consensus 288 ~kE~~~~g~fry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 288 LKEVDLRGSFRYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred hheeeeeeeeeeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 99999999999998899999999999998865 5 89999999999999988774 3688887653
No 6
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3e-33 Score=224.45 Aligned_cols=214 Identities=55% Similarity=0.922 Sum_probs=190.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
++|...++++|+++++++++++++.+.|||+++......++|++++|+|+|++|++++|+|+++|+++++++.+++++..
T Consensus 140 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~ 219 (357)
T PLN02514 140 VVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREE 219 (357)
T ss_pred EEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 56788999999999999999999999999999987776679999999999999999999999999999999888888777
Q ss_pred HHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEe
Q 027664 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSL 161 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 161 (220)
+++.+|++.++++.+.+.+.+.++++|++|||+|....+..++++++++|+++.+|......+++...++.+++++.|++
T Consensus 220 ~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~ 299 (357)
T PLN02514 220 ALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSF 299 (357)
T ss_pred HHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEe
Confidence 77789998888776655566666689999999997657889999999999999999876556777778888999999999
Q ss_pred cCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEeCCc
Q 027664 162 IGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANT 215 (220)
Q Consensus 162 ~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 215 (220)
.....+++++++++++|++.+.+++|+++++.+||+.+++++..||+++.++.+
T Consensus 300 ~~~~~~~~~~~~~~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~ 353 (357)
T PLN02514 300 IGSMKETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGS 353 (357)
T ss_pred cCCHHHHHHHHHHHHhCCCcCcEEEEcHHHHHHHHHHHHcCCCceeEEEEcccc
Confidence 888889999999999999887678899999999999999998889999998654
No 7
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=221.81 Aligned_cols=209 Identities=29% Similarity=0.456 Sum_probs=178.7
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
++|++.++++|+++|+++||+++++++|||+++.....+++|++|||+|+ |++|.+++|+||++|+.+++++.++++.+
T Consensus 102 ~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~ 181 (326)
T COG0604 102 VVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181 (326)
T ss_pred EecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence 57899999999999999999999999999999999888999999999996 99999999999999988888888877777
Q ss_pred HHHHHcCCCEEEcCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchhhhcC
Q 027664 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (220)
+++++|+++++++.+. +.++++++ ++|+|||++|+. .+...+++++++|+++.+|...+ ...++...++.+
T Consensus 182 -~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~ 259 (326)
T COG0604 182 -LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGK 259 (326)
T ss_pred -HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhc
Confidence 6789999999998875 35666665 699999999998 68899999999999999999873 355666777888
Q ss_pred CeEEEEEecCCH------HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHc-CCCceeEEEEe
Q 027664 154 RKIVGGSLIGGL------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAK-ADVRYRFVIDV 212 (220)
Q Consensus 154 ~~~~~~~~~~~~------~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~-~~~~gk~vv~~ 212 (220)
.+...+...... +.+.++.+++++|.+++.+ .+|+|++..++...... ++..||+|+++
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 260 RLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 888888776533 5577799999999999999 79999996555544433 47789999974
No 8
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-31 Score=212.00 Aligned_cols=207 Identities=20% Similarity=0.260 Sum_probs=173.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
+++++.++++|+++++++++ +...+.++|+++.+.. ..+|++|+|+|+|++|++++|+|+++|+ +|++++.++++++
T Consensus 131 ~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~~~~-~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~ 208 (343)
T PRK09880 131 VVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAHQAG-DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLS 208 (343)
T ss_pred EechHHeEECCCCCCHHHHH-hhcHHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHH
Confidence 57888999999999987655 5567789999998776 4689999999999999999999999999 6888888887776
Q ss_pred HHHHHcCCCEEEcCCCHHH--HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEE
Q 027664 81 EAVERLGADSFLVSRDQDE--MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVG 158 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~--~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 158 (220)
.+ +++|+++++++.+.+. +.+..+++|++|||+|.+..++.++++++++|+++.+|......+++...++.+++++.
T Consensus 209 ~a-~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~ 287 (343)
T PRK09880 209 LA-REMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLK 287 (343)
T ss_pred HH-HHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEE
Confidence 55 7899999998876432 11222369999999998767889999999999999999866556777788889999999
Q ss_pred EEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 159 GSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
+++.. ..+++.+++++++|++++. + ++|+++++++|++.+.+++..||+++.+
T Consensus 288 g~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 288 GSFRF-TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EEeec-cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 98754 4678999999999999863 4 8999999999999999887779999864
No 9
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.98 E-value=3.6e-31 Score=211.62 Aligned_cols=204 Identities=20% Similarity=0.180 Sum_probs=171.1
Q ss_pred eCCCCCCcc-ccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC
Q 027664 10 RIPEGAPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG 87 (220)
Q Consensus 10 ~ip~~~s~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g 87 (220)
++|++++++ +||++++++.|||+++.....+++|++|||+|+ |++|++++|+|+++|++|++++.++++++.+.+.+|
T Consensus 125 ~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG 204 (348)
T PLN03154 125 QLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 204 (348)
T ss_pred cCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC
Confidence 459999986 688999999999999987777899999999998 999999999999999999999888877766644799
Q ss_pred CCEEEcCCCH----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CC-----CCchhhhcCCeE
Q 027664 88 ADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LE-----LPAFPLLTGRKI 156 (220)
Q Consensus 88 ~~~~~~~~~~----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-----~~~~~~~~~~~~ 156 (220)
++.++++.+. +.+++.++ ++|++|||+|+. .+..++++++++|+++.+|...+. .+ ++...++.++++
T Consensus 205 a~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~ 283 (348)
T PLN03154 205 FDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIR 283 (348)
T ss_pred CCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccce
Confidence 9999988642 23444444 799999999986 789999999999999999976432 11 245567888999
Q ss_pred EEEEecCC-----HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEeCC
Q 027664 157 VGGSLIGG-----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVAN 214 (220)
Q Consensus 157 ~~~~~~~~-----~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 214 (220)
+.|++.+. .+.++++++++++|++++.+ .+|+|+++++|++.+++++..||+|+++.+
T Consensus 284 i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 284 MQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 99987643 24578899999999999887 689999999999999999999999999864
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.98 E-value=4.8e-31 Score=212.83 Aligned_cols=208 Identities=25% Similarity=0.411 Sum_probs=177.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
++|++.++++|+++++++|+++++.+.|||+++.....+++|++|+|.|+|++|++++|+|+..|+ +|++++.++++++
T Consensus 151 ~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~ 230 (371)
T cd08281 151 VVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLA 230 (371)
T ss_pred EecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 567889999999999999999999999999998666668999999999999999999999999999 6988888887766
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~ 154 (220)
.+ +++|++.++++.+.+ .+++.++ ++|++|||+|....++.++++++++|+++.+|.... ..+++...++.++
T Consensus 231 ~a-~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 309 (371)
T cd08281 231 LA-RELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE 309 (371)
T ss_pred HH-HHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence 55 789999999887654 3444444 799999999987678999999999999999997643 3466777788999
Q ss_pred eEEEEEecCC---HHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 155 KIVGGSLIGG---LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 155 ~~~~~~~~~~---~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
+++.|++... ..+++.+++++++|++++. + ++|+|+++++||+.+++++..+|+|+
T Consensus 310 ~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 310 RTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 9999988653 5678899999999999864 4 79999999999999999988777653
No 11
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.98 E-value=1.6e-31 Score=194.92 Aligned_cols=213 Identities=21% Similarity=0.259 Sum_probs=180.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.+|...++++|+.+++.+||++...++|||..++++..+++|++|||+.+ |++|+++.|+++..|+.+|.+..+.++++
T Consensus 106 ~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~ 185 (336)
T KOG1197|consen 106 TVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHE 185 (336)
T ss_pred cccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHH
Confidence 47888999999999999999999999999999999999999999999975 99999999999999999999999998887
Q ss_pred HHHHHcCCCEEEcCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ ++.|+++.++++.++. +.++++ |+|+++|.+|.+ .+...+++|++.|.+|.+|...+. ..++...+-.++
T Consensus 186 ~a-kenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~ 263 (336)
T KOG1197|consen 186 IA-KENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKA 263 (336)
T ss_pred HH-HhcCCcceeeccchhHHHHHHhccCCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhh
Confidence 76 7899999999998865 455564 899999999998 699999999999999999987764 345555555555
Q ss_pred eEEEEEe----cCCHHHH----HHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 027664 155 KIVGGSL----IGGLKET----QEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVANTM 216 (220)
Q Consensus 155 ~~~~~~~----~~~~~~~----~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~ 216 (220)
+++..-. ......| ..++..+.+|.++++| ++|||+++.+|+..+++.+..||+++-+.++.
T Consensus 264 l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~ 334 (336)
T KOG1197|consen 264 LQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEK 334 (336)
T ss_pred hhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCccc
Confidence 5543321 1222333 4466778899999999 89999999999999999999999999987664
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.98 E-value=9e-31 Score=208.94 Aligned_cols=207 Identities=25% Similarity=0.347 Sum_probs=176.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
++|++.++++|+++++++|+++++++.|||+++.... +++|++|+|+|+|++|++++|+|+++|++ |++++.++++++
T Consensus 124 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~ 202 (339)
T cd08239 124 LVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLE 202 (339)
T ss_pred EechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 5678899999999999999999999999999997765 78999999999999999999999999997 999888887766
Q ss_pred HHHHHcCCCEEEcCCCHH--HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCc-hhhhcCCe
Q 027664 81 EAVERLGADSFLVSRDQD--EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA-FPLLTGRK 155 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~--~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~ 155 (220)
.+ +++|++.++++.+.+ .+.+.++ ++|++|||+|+...+..++++++++|+++.+|.... ..++. ..++.+++
T Consensus 203 ~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~ 280 (339)
T cd08239 203 LA-KALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQR 280 (339)
T ss_pred HH-HHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCC
Confidence 55 789999999886643 3334443 799999999988666889999999999999997543 23333 45678999
Q ss_pred EEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 156 IVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
++.|++....++++++++++.+|++++. + ++|+++++++||+.++++. .||+|+++
T Consensus 281 ~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 281 TLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred EEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 9999998888889999999999998753 4 7999999999999998875 69999875
No 13
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.97 E-value=1.9e-30 Score=206.04 Aligned_cols=202 Identities=25% Similarity=0.309 Sum_probs=174.6
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
++|+..++++|+++++++++++++.+.|||+++.. ..+++|++|||+|+|++|++++|+|+..|++|++++.++++++.
T Consensus 126 ~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~ 204 (329)
T TIGR02822 126 TVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRL 204 (329)
T ss_pred EeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 57888999999999999999999999999999976 45899999999999999999999999999999999988877655
Q ss_pred HHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCCeEEEEE
Q 027664 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGRKIVGGS 160 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~ 160 (220)
++++|+++++++.+.. .+++|+++++.+....+..++++++++|+++.+|...+. ..++...++.+++++.++
T Consensus 205 -a~~~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~ 278 (329)
T TIGR02822 205 -ALALGAASAGGAYDTP-----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSV 278 (329)
T ss_pred -HHHhCCceeccccccC-----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEe
Confidence 4889999998754321 237899999988777889999999999999999975432 456666778889999999
Q ss_pred ecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEE
Q 027664 161 LIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 161 ~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
+.....++..+++++++|++++..++|+|+++++||+.+.+++..||+|+
T Consensus 279 ~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 279 TSNTRADAREFLELAAQHGVRVTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred ecCCHHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 88777889999999999999754489999999999999999998899987
No 14
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.97 E-value=2.2e-30 Score=196.91 Aligned_cols=207 Identities=26% Similarity=0.415 Sum_probs=184.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
++++.++++++++.+++.++.+.|+..|.+.+..+..++++|++|.|.|.|++|++++|-|+..|+ ++|+++.+++|++
T Consensus 145 vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~ 224 (366)
T COG1062 145 VVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLE 224 (366)
T ss_pred eecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHH
Confidence 678999999999999999999999999999998888889999999999999999999999999999 9999999998876
Q ss_pred HHHHHcCCCEEEcCCCH----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchhhhcC
Q 027664 81 EAVERLGADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (220)
.+ ++||+++++|+.+. +.+.++++ |+|++|||+|+...+++++.++.++|+.+.+|.... .++.+++.++..
T Consensus 225 ~A-~~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g 303 (366)
T COG1062 225 LA-KKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG 303 (366)
T ss_pred HH-HhcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc
Confidence 66 78999999999875 24566777 999999999999899999999999999999998764 356777777777
Q ss_pred CeEEEEEecCC---HHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 154 RKIVGGSLIGG---LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 154 ~~~~~~~~~~~---~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.+|.|++++. +.+++.+++++.+|+++.. + +.++|+||+|||+.|.+++.. |.|+.
T Consensus 304 -r~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 304 -RVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred -ceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 9999998863 5889999999999999975 4 799999999999999999874 66654
No 15
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=3.8e-30 Score=202.99 Aligned_cols=210 Identities=26% Similarity=0.337 Sum_probs=165.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhc------CCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeC
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG------LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST 74 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~------~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~ 74 (220)
++|+..++++|+++++.+||++|.++.|||+++.... ++++|++|||+|+ |++|++++|+|++.|+..++++.
T Consensus 111 v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~ 190 (347)
T KOG1198|consen 111 VVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC 190 (347)
T ss_pred EcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc
Confidence 6788999999999999999999999999999999988 8899999999986 89999999999999964444555
Q ss_pred CccchHHHHHHcCCCEEEcCCCHHHHHHhc---C-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchh
Q 027664 75 SPSKKSEAVERLGADSFLVSRDQDEMQAAM---G-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFP 149 (220)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~ 149 (220)
+.++ .++++++|+++++|+++++.++... + +||+||||+|+. .......++..+|+...++...+. .+.....
T Consensus 191 s~e~-~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~ 268 (347)
T KOG1198|consen 191 SKEK-LELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDD 268 (347)
T ss_pred ccch-HHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCCceEEEEecccccccccccc
Confidence 5444 4566899999999999976555443 2 899999999997 577777888887765555444321 1111110
Q ss_pred ------------h-hcCCeEEEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEeC
Q 027664 150 ------------L-LTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 150 ------------~-~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 213 (220)
. ..+...+.+......+.++.+.+++++|++++.+ +.||++++++|++.+.++...||+++.+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 269 LWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred chhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 0 1111222333445668899999999999999998 89999999999999999888999999875
No 16
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.97 E-value=8.4e-30 Score=204.03 Aligned_cols=208 Identities=23% Similarity=0.256 Sum_probs=178.5
Q ss_pred cccccceEeCCC------CCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCC
Q 027664 2 VADEHFVVRIPE------GAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (220)
Q Consensus 2 ~v~~~~~~~ip~------~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~ 75 (220)
.+|++.++++|+ ++++++++++++.+.++|+++... .+++|++|+|+|+|++|++++|+|++.|++|++++.+
T Consensus 121 ~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~~-~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~ 199 (349)
T TIGR03201 121 VVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQA-GLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDID 199 (349)
T ss_pred EechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCC
Confidence 467888999999 899999999999999999998764 4799999999999999999999999999999999888
Q ss_pred ccchHHHHHHcCCCEEEcCCCH---H---HHHHhcC--Ccc----EEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCC
Q 027664 76 PSKKSEAVERLGADSFLVSRDQ---D---EMQAAMG--TMD----GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL 143 (220)
Q Consensus 76 ~~~~~~~~~~~g~~~~~~~~~~---~---~~~~~~~--~~d----~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 143 (220)
+++++.+ +++|+++++++.+. + .++++++ ++| ++|||+|+...++.++++++++|+++.+|......
T Consensus 200 ~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~ 278 (349)
T TIGR03201 200 PEKLEMM-KGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKT 278 (349)
T ss_pred HHHHHHH-HHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCc
Confidence 8877666 78999999987553 2 2344443 665 89999998767788999999999999999876556
Q ss_pred CCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccc--eEEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 144 ELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRAD--IEVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++...++.++.++.|.+.....+++.+++++++|++++. +++|+|+++++||+.+.+++..+|++++
T Consensus 279 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 279 EYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred ccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence 6777777788889999987777889999999999999864 3789999999999999999888999885
No 17
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.97 E-value=7.4e-30 Score=205.01 Aligned_cols=208 Identities=25% Similarity=0.323 Sum_probs=175.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
.+|++.++++|+++++++|+++++.+.++|+++.....+++|++|||+|+|++|++++|+|+..|+ +|++++.++++++
T Consensus 136 ~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~ 215 (358)
T TIGR03451 136 LVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLE 215 (358)
T ss_pred EEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 467889999999999999999999999999887766678999999999999999999999999999 5888888887666
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC--CCCCchhhhcC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~ 153 (220)
.+ +++|++.++++.+.+ .+.+.++ ++|++|||+|++..+..++++++++|+++.+|..... .+++...++.+
T Consensus 216 ~~-~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 294 (358)
T TIGR03451 216 WA-REFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGR 294 (358)
T ss_pred HH-HHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhc
Confidence 55 789999999886643 3445544 7999999999866789999999999999999986543 45666678889
Q ss_pred CeEEEEEecC---CHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 154 RKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 154 ~~~~~~~~~~---~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+.++.+++.. ...+++.+++++++|++++. + ++|+++++++|++.+++++.. |+++.
T Consensus 295 ~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 295 GGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred CCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 9999988643 35778999999999999864 4 899999999999999888764 77764
No 18
>PLN02827 Alcohol dehydrogenase-like
Probab=99.97 E-value=1.6e-29 Score=204.13 Aligned_cols=210 Identities=23% Similarity=0.312 Sum_probs=174.2
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
.+|+..++++|+++++++++++++++.++|+++.....+++|++|||+|+|++|++++|+|+++|+ .|++++.++++++
T Consensus 153 ~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~ 232 (378)
T PLN02827 153 VVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAE 232 (378)
T ss_pred EechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 568889999999999999999999989999877665668999999999999999999999999999 5777776776665
Q ss_pred HHHHHcCCCEEEcCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEeCCCCCCCCCCc-hhhhc
Q 027664 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKPLELPA-FPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~ 152 (220)
.+ +++|++.++++.+. +.+++.++ ++|++|||+|....+..+++.++++ |+++.+|.......+.. ..++.
T Consensus 233 ~a-~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~ 311 (378)
T PLN02827 233 KA-KTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL 311 (378)
T ss_pred HH-HHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence 55 78999999987642 23444444 7999999999876789999999998 99999998654444433 35778
Q ss_pred CCeEEEEEecCC---HHHHHHHHHHHHcCCCcc--ce-EEeecccHHHHHHHHHcCCCceeEEEEeC
Q 027664 153 GRKIVGGSLIGG---LKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 153 ~~~~~~~~~~~~---~~~~~~~~~~i~~g~i~~--~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 213 (220)
+++++.|++... ..+++.+++++++|++++ .+ ++|+|+++++|++.+++++. +|+||.+.
T Consensus 312 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 312 SGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred cCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 999999987643 357889999999999998 45 89999999999999998876 79999874
No 19
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.97 E-value=6.3e-29 Score=198.25 Aligned_cols=210 Identities=19% Similarity=0.183 Sum_probs=171.2
Q ss_pred cccc-cceEeCC-CCCCcc-ccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc
Q 027664 2 VADE-HFVVRIP-EGAPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~v~~-~~~~~ip-~~~s~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~ 77 (220)
++|+ ..++++| ++++++ +++++++++.|||+++....++++|++|||+|+ |++|++++|+|+.+|++|++++++++
T Consensus 108 ~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~ 187 (338)
T cd08295 108 LIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE 187 (338)
T ss_pred EecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5677 7899995 678887 799999999999999987777899999999997 99999999999999999999998887
Q ss_pred chHHHHHHcCCCEEEcCCCH----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-C-----CCC
Q 027664 78 KKSEAVERLGADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-L-----ELP 146 (220)
Q Consensus 78 ~~~~~~~~~g~~~~~~~~~~----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~ 146 (220)
+.+.+.+.+|+++++++.+. +.+++..+ ++|++||++|+. .+..++++++++|+++.+|..... . ..+
T Consensus 188 ~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~ 266 (338)
T cd08295 188 KVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRN 266 (338)
T ss_pred HHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccC
Confidence 77666444999999986542 23444443 899999999985 689999999999999999865432 1 123
Q ss_pred chhhhcCCeEEEEEecCCH-----HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 147 AFPLLTGRKIVGGSLIGGL-----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
...++.+++++.++..... +.++++++++.+|++++.+ ..|+++++++|++.+++++..||+|+++
T Consensus 267 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 267 LLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 3456777888888655432 3467889999999999876 6899999999999999998889999864
No 20
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.97 E-value=1.1e-28 Score=198.90 Aligned_cols=208 Identities=23% Similarity=0.354 Sum_probs=169.6
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
++|++.++++|+++|+++++++++++.|||+++.....+++|++|||+|+|++|++++|+|+++|+ +|++++.++++++
T Consensus 145 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~ 224 (368)
T TIGR02818 145 VVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFE 224 (368)
T ss_pred EechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999998766668999999999999999999999999999 7999988887766
Q ss_pred HHHHHcCCCEEEcCCC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEeCCCCC--CCCCCchhhh
Q 027664 81 EAVERLGADSFLVSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~--~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (220)
.+ +++|++.++++.+ . +.+.++++ ++|++|||+|.+..+..++++++++ |+++.+|.... ...+....++
T Consensus 225 ~a-~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~ 303 (368)
T TIGR02818 225 LA-KKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV 303 (368)
T ss_pred HH-HHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh
Confidence 66 7899999998764 2 23445544 8999999999876788999999886 99999997643 2344444444
Q ss_pred cCCeEEEEEecC---CHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 152 TGRKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
. +..+.++... ...++.++++++.+|++++. + ++|+|+++++|++.+++++. .|+++.+
T Consensus 304 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 304 T-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred c-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 3 3456676543 34678999999999998753 4 89999999999999987764 7998864
No 21
>PLN02740 Alcohol dehydrogenase-like
Probab=99.97 E-value=1e-28 Score=199.84 Aligned_cols=207 Identities=24% Similarity=0.357 Sum_probs=171.2
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
++|++.++++|+++++++++.+++.+.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|++++.++++++
T Consensus 158 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 158 VLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFE 237 (381)
T ss_pred EEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence 567889999999999999999999999999987666668999999999999999999999999999 6999988887776
Q ss_pred HHHHHcCCCEEEcCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEeCCCCCC--CCCCchhhh
Q 027664 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +++|++.++++.+. +.+++.++ ++|++|||+|.+..+..++.+++++ |+++.+|..... ..++...+
T Consensus 238 ~a-~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~- 315 (381)
T PLN02740 238 KG-KEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL- 315 (381)
T ss_pred HH-HHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-
Confidence 66 78999999987652 23445544 7999999999876789999999996 999999986543 23333333
Q ss_pred cCCeEEEEEecCC---HHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 152 TGRKIVGGSLIGG---LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~~~~~~~~~---~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.+++++.|++.+. ..+++++++++.+|.+++. + ++|+|+++++|++.+.+++. .|++|+
T Consensus 316 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~ 380 (381)
T PLN02740 316 FDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH 380 (381)
T ss_pred hcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence 3678898887643 3578999999999998763 5 89999999999999988765 699886
No 22
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=5.4e-29 Score=186.83 Aligned_cols=207 Identities=26% Similarity=0.386 Sum_probs=181.2
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
+++...+.+|+++.+++.++.+.|...|+|.|.-+...+++|+++.|+|-|++|+++++-||+.|+ ++|.++-++++.+
T Consensus 152 Vv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~ 231 (375)
T KOG0022|consen 152 VVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFE 231 (375)
T ss_pred EeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHH
Confidence 678899999999999999999999999999998888889999999999999999999999999999 9999999998887
Q ss_pred HHHHHcCCCEEEcCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEeCCCCCC--CCCCchhhh
Q 027664 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +.+|+++++|+.+. +.+.++++ |+|+.|||+|+.+.+++++.+.++| |+-+.+|..... +++.++.++
T Consensus 232 ~a-k~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~ 310 (375)
T KOG0022|consen 232 KA-KEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV 310 (375)
T ss_pred HH-HhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc
Confidence 76 78999999999852 45667776 8999999999999999999999888 999999987653 666777755
Q ss_pred cCCeEEEEEecCC---HHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 152 TGRKIVGGSLIGG---LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~~~~~~~~~---~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
. +.++.|+.++. .++++.+++.+.+++++.. + |++||++|++||+.|.+++.. |-|+.
T Consensus 311 ~-GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 311 T-GRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred c-ccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 5 66788877665 4788999999999988865 5 999999999999999999875 66654
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.97 E-value=1.6e-28 Score=196.54 Aligned_cols=208 Identities=21% Similarity=0.262 Sum_probs=168.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.+|++.++++|+++++++|+.+. ...++++++... .+++|++|+|+|+|++|++++|+|+++|++ |+++++++++++
T Consensus 122 ~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~~~~-~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 199 (347)
T PRK10309 122 VVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHLA-QGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLA 199 (347)
T ss_pred EeehHHeEECcCCCCHHHhhhhh-HHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 46788999999999999998763 345577776544 478999999999999999999999999996 677888877766
Q ss_pred HHHHHcCCCEEEcCCCH--HHHHHhcC--Ccc-EEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCc---hhhhc
Q 027664 81 EAVERLGADSFLVSRDQ--DEMQAAMG--TMD-GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA---FPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~--~~~~~~~~--~~d-~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~ 152 (220)
.+ +++|++.++++.+. +.+.+.+. ++| ++|||+|....+..++++++++|+++.+|...+..+++. ..++.
T Consensus 200 ~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 278 (347)
T PRK10309 200 LA-KSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILR 278 (347)
T ss_pred HH-HHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhh
Confidence 55 78999999887653 33444443 688 999999987678999999999999999997665433332 35678
Q ss_pred CCeEEEEEecCC-----HHHHHHHHHHHHcCCCcc--ce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 153 GRKIVGGSLIGG-----LKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 153 ~~~~~~~~~~~~-----~~~~~~~~~~i~~g~i~~--~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
+++++.|++.+. ..+++.+++++++|.+++ .+ ++|+|+++++|++.+.++...||+|+++
T Consensus 279 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 279 KELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 899999987542 367889999999999864 35 8999999999999999888789999976
No 24
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.97 E-value=1.1e-28 Score=195.77 Aligned_cols=207 Identities=21% Similarity=0.250 Sum_probs=168.9
Q ss_pred ccccceEeC----CCCCCcccc-ccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc
Q 027664 3 ADEHFVVRI----PEGAPLDAT-APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (220)
Q Consensus 3 v~~~~~~~i----p~~~s~~~a-a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~ 76 (220)
++.+.+.++ |+++++++| +++++.+.|||+++.....+++|++|||+|+ |++|++++|+|+..|++|+++++++
T Consensus 94 ~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~ 173 (325)
T TIGR02825 94 SDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD 173 (325)
T ss_pred echhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 456666666 999999987 6899999999999877777899999999996 9999999999999999999999888
Q ss_pred cchHHHHHHcCCCEEEcCCCHH----HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-----CCC--
Q 027664 77 SKKSEAVERLGADSFLVSRDQD----EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-----PLE-- 144 (220)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~-- 144 (220)
++.+.+ +++|++.++++.+.+ .++...+ ++|++|||+|+. .+..++++++++|+++.+|.... ...
T Consensus 174 ~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~ 251 (325)
T TIGR02825 174 EKVAYL-KKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPG 251 (325)
T ss_pred HHHHHH-HHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCC
Confidence 776666 789999999877532 2333443 799999999987 57999999999999999986532 111
Q ss_pred CCchhhhcCCeEEEEEecCC------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 145 LPAFPLLTGRKIVGGSLIGG------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.....+..+++++.++.... .+.++++++++++|++++.+ ..|+++++++|++.+++++..||+|++
T Consensus 252 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 252 PPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred cchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 12334566788888876432 24678899999999999876 789999999999999999888999873
No 25
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.96 E-value=2.9e-28 Score=194.06 Aligned_cols=207 Identities=34% Similarity=0.608 Sum_probs=180.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++...++++|+++++++++++++.+.|+|+++... .++++++|+|+|+|++|++++++|+++|++|+++++++++++.
T Consensus 124 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~ 202 (333)
T cd08296 124 LAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADL 202 (333)
T ss_pred EEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 467788999999999999999999999999999777 6899999999999999999999999999999999998877666
Q ss_pred HHHHcCCCEEEcCCCHHH---HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEE
Q 027664 82 AVERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVG 158 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~---~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 158 (220)
+ +++|+++++++.+.+. +.+. +++|+++|++|....+..++++++++|+++.+|......+++...++.+++++.
T Consensus 203 ~-~~~g~~~~i~~~~~~~~~~~~~~-~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 280 (333)
T cd08296 203 A-RKLGAHHYIDTSKEDVAEALQEL-GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIH 280 (333)
T ss_pred H-HHcCCcEEecCCCccHHHHHHhc-CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEE
Confidence 6 7899999998776433 2333 479999999976657889999999999999999876556677777789999999
Q ss_pred EEecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 159 GSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+...+...++..++++++++.+.+.++.|+++++.+||+.+++++.+||+|++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 281 GWPSGTALDSEDTLKFSALHGVRPMVETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred EeCcCCHHHHHHHHHHHHhCCCCceEEEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 99877778899999999999888767889999999999999999989999874
No 26
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.96 E-value=4.4e-28 Score=195.42 Aligned_cols=207 Identities=24% Similarity=0.383 Sum_probs=168.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
+++++.++++|+++++++++++++.+.|+|+++.....+++|++|||+|+|++|++++|+|+++|+ +|++++.++++++
T Consensus 146 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~ 225 (368)
T cd08300 146 VVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFE 225 (368)
T ss_pred EEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467889999999999999999999999999988666668999999999999999999999999999 7999999988776
Q ss_pred HHHHHcCCCEEEcCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEeCCCCC--CCCCCchhhh
Q 027664 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (220)
.+ +++|+++++++.+. +.+.++++ ++|++|||+|....+..++++++++ |+++.+|...+ ....+...+.
T Consensus 226 ~~-~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 304 (368)
T cd08300 226 LA-KKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV 304 (368)
T ss_pred HH-HHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh
Confidence 55 78999999987653 22444444 7999999999866789999999886 99999997642 2333443333
Q ss_pred cCCeEEEEEecC---CHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 152 TGRKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+...+.++... ...+++++++++.+|++++. + ++|+|+++++||+.+.+++. .|++++
T Consensus 305 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 305 -TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred -hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 33455565432 35678899999999999864 4 89999999999999987764 688874
No 27
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.96 E-value=5e-28 Score=194.86 Aligned_cols=207 Identities=25% Similarity=0.407 Sum_probs=170.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++++++++.|||+++.....+++|++|+|+|+|++|++++|+|+++|+ +|+++++++++++
T Consensus 144 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~ 223 (365)
T cd08277 144 VVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFE 223 (365)
T ss_pred EEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999987666668999999999999999999999999999 7988888887766
Q ss_pred HHHHHcCCCEEEcCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEeCCCCC-CCCCCchhhhc
Q 027664 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK-PLELPAFPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~ 152 (220)
.+ +.+|++++++..+. +.+++.++ ++|++|||+|....+..++++++++ |+++.+|...+ ..+++...++.
T Consensus 224 ~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 302 (365)
T cd08277 224 KA-KEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL 302 (365)
T ss_pred HH-HHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh
Confidence 55 78999999887642 23444443 7999999999766788999999885 99999998653 34555555554
Q ss_pred CCeEEEEEecCC---HHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 153 GRKIVGGSLIGG---LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 153 ~~~~~~~~~~~~---~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
++++.|++.+. ..++++++++++++.++.. + ++|+|+++++|++.+++++ ..|++++
T Consensus 303 -~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 303 -GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred -CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence 78888887653 4578999999999987743 4 7999999999999998877 4688763
No 28
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.96 E-value=1.1e-27 Score=193.24 Aligned_cols=206 Identities=24% Similarity=0.412 Sum_probs=170.7
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
++++..++++|+++++++++++++.+.|+|+++.....+++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++
T Consensus 147 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~ 226 (369)
T cd08301 147 VVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFE 226 (369)
T ss_pred EEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 467889999999999999999999999999987766678999999999999999999999999999 8999998888776
Q ss_pred HHHHHcCCCEEEcCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEeCCCCCC--CCCCchhhh
Q 027664 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~-----~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +++|++.++++.+. +.+++.++ ++|++|||+|....+..++.+++++ |+++.+|....+ .+++...++
T Consensus 227 ~~-~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~ 305 (369)
T cd08301 227 QA-KKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL 305 (369)
T ss_pred HH-HHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh
Confidence 66 78999999887642 22444444 7999999999876788899999996 999999987543 344444444
Q ss_pred cCCeEEEEEecCC---HHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 152 TGRKIVGGSLIGG---LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~~~~~~~~~---~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
+++++.|++... ..+++++++++.+|.++.. + ++|+|+++++||+.+++++. .|+++
T Consensus 306 -~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~ 368 (369)
T cd08301 306 -NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCIL 368 (369)
T ss_pred -cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEe
Confidence 688999987643 3578899999999988754 4 89999999999999998886 58876
No 29
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.96 E-value=4.3e-28 Score=193.47 Aligned_cols=204 Identities=16% Similarity=0.205 Sum_probs=157.1
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhc--CCCCCCEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCcc
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG--LDKPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPS 77 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~--~~~~~~~vlI~G~g~~G~~~~~la~~-~g~-~vi~~~~~~~ 77 (220)
++|+++++++|+++|+++|| +.....++|+++.... .+++|++|+|.|+|++|++++|++++ .|+ +|++++.+++
T Consensus 122 ~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~ 200 (341)
T cd08237 122 FLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQE 200 (341)
T ss_pred EEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHh
Confidence 57889999999999998877 4457788898886432 35789999999999999999999986 665 8999998887
Q ss_pred chHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCC---cccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCC
Q 027664 78 KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---VHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGR 154 (220)
Q Consensus 78 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (220)
|++.+ +..+.+..++ + ..+ ..++|++|||+|+ +..++.++++++++|+++.+|....+.+++...++.++
T Consensus 201 k~~~a-~~~~~~~~~~----~-~~~-~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~ 273 (341)
T cd08237 201 KLDLF-SFADETYLID----D-IPE-DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKG 273 (341)
T ss_pred HHHHH-hhcCceeehh----h-hhh-ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCc
Confidence 77665 4566543322 1 111 1279999999994 34688999999999999999976555667777788999
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcC-----CCccce-EEeecccHHHHHHHHHcCC--CceeEEEEeC
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKH-----NIRADI-EVIPADYVNTAMERLAKAD--VRYRFVIDVA 213 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g-----~i~~~~-~~~~~~~~~~a~~~~~~~~--~~gk~vv~~~ 213 (220)
+++.|+......+++++++++++| .+.+.+ ++|+++++.++.+.++... ..||+|++++
T Consensus 274 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 274 LTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred eEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 999999877778899999999998 355556 7899865555444444332 5699999874
No 30
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.96 E-value=1.1e-27 Score=192.04 Aligned_cols=207 Identities=26% Similarity=0.367 Sum_probs=174.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+ ..+.|||+++. ...+++|++|+|+|+|++|++++|+|+..|+ +|++++.++++.+
T Consensus 134 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~ 211 (351)
T cd08233 134 VVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAVR-RSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRE 211 (351)
T ss_pred EechHHeEECcCCCCHHHhhhc-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4677899999999999998765 67789999994 4557999999999999999999999999999 8888888887766
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCe
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRK 155 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (220)
.+ +++|++.++++.+.+ .+.+.++ ++|++|||+|....+..++++++++|+++.+|......+++...++.+++
T Consensus 212 ~~-~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 290 (351)
T cd08233 212 LA-EELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEK 290 (351)
T ss_pred HH-HHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCc
Confidence 55 679999999887643 3444443 59999999997657889999999999999999876556777778888999
Q ss_pred EEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccH-HHHHHHHHcCCCc-eeEEEE
Q 027664 156 IVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYV-NTAMERLAKADVR-YRFVID 211 (220)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~-~~a~~~~~~~~~~-gk~vv~ 211 (220)
++.+.+.+..++++++++++++|++++. + ++|+++++ ++|++.+.+++.. +|+|+.
T Consensus 291 ~i~g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 291 TLTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEEeccCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999987777889999999999999753 4 79999996 7999999888864 999873
No 31
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.96 E-value=2.8e-27 Score=188.68 Aligned_cols=208 Identities=63% Similarity=1.009 Sum_probs=181.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++++++.+++.+.+||+++.... +++|++++|.|+|++|++++++++..|++++++++++++.+.
T Consensus 130 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~ 208 (337)
T cd05283 130 VVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKED 208 (337)
T ss_pred EechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4677899999999999999999999999999998876 799999999888999999999999999999999988877766
Q ss_pred HHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEe
Q 027664 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSL 161 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 161 (220)
+ +.+|++.+++..+.+..+...+++|++|||+|.......++++++++|+++.+|.......++...++.++.++.++.
T Consensus 209 ~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~ 287 (337)
T cd05283 209 A-LKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSL 287 (337)
T ss_pred H-HHcCCcEEecCcchhhhhhccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEec
Confidence 6 679999988877655444444589999999998755889999999999999998765544566777788999999998
Q ss_pred cCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 162 IGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 162 ~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
....++++.+++++++|++++.++.|+++++++||+.+.+++..||+|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 288 IGGRKETQEMLDFAAEHGIKPWVEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ccCHHHHHHHHHHHHhCCCccceEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 88889999999999999998767889999999999999999988998874
No 32
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.96 E-value=1.7e-27 Score=189.27 Aligned_cols=209 Identities=18% Similarity=0.214 Sum_probs=168.5
Q ss_pred ccccc---ceEeCCCCCC--c---cccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEE
Q 027664 2 VADEH---FVVRIPEGAP--L---DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI 72 (220)
Q Consensus 2 ~v~~~---~~~~ip~~~s--~---~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~ 72 (220)
+++.. .++++|++++ + ..++++++.++|||+++.....+++|++|||+|+ |++|++++|+|+..|++|+++
T Consensus 95 ~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~ 174 (329)
T cd08294 95 VSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGC 174 (329)
T ss_pred EECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE
Confidence 45677 9999999998 2 2234688999999999977777899999999996 999999999999999999999
Q ss_pred eCCccchHHHHHHcCCCEEEcCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CC---
Q 027664 73 STSPSKKSEAVERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PL--- 143 (220)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~--- 143 (220)
++++++.+.+ +++|+++++++.+.+ .+++.++ ++|++||++|+. .+..++++++++|+++.+|.... ..
T Consensus 175 ~~s~~~~~~l-~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~ 252 (329)
T cd08294 175 AGSDDKVAWL-KELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPK 252 (329)
T ss_pred eCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCC
Confidence 9888777666 679999999987643 3444443 799999999985 68999999999999999985422 11
Q ss_pred --CCCchhhhcCCeEEEEEecCCH-----HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 144 --ELPAFPLLTGRKIVGGSLIGGL-----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
......+..+++++.++....+ +.++++++++++|++++.+ .+|+++++++|++.+++++..||+|+++
T Consensus 253 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 253 KGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred cCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 2223356778888888765432 3367788999999998766 6899999999999999998889999863
No 33
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.96 E-value=3e-27 Score=188.54 Aligned_cols=210 Identities=26% Similarity=0.349 Sum_probs=169.0
Q ss_pred cccccceEe-CCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccch
Q 027664 2 VADEHFVVR-IPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (220)
Q Consensus 2 ~v~~~~~~~-ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~ 79 (220)
.+|.+++++ +|+++ ..+++++...+.+++++.......+++.+|+|+|+|++|++++++++..|+ +|++++.+++|+
T Consensus 128 ~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl 206 (350)
T COG1063 128 RVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL 206 (350)
T ss_pred EeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 456555555 48888 566667888889997774444334666699999999999999999999999 888888888887
Q ss_pred HHHHHHcCCCEEEcCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCC-CCCchhhhcC
Q 027664 80 SEAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTG 153 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~ 153 (220)
+.+++..+++.+++..++ ..+.+.++ ++|++|||+|....+..+++.++++|+++.+|...... .++...++.+
T Consensus 207 ~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~k 286 (350)
T COG1063 207 ELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSK 286 (350)
T ss_pred HHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhc
Confidence 777544777877776553 23445554 69999999998878999999999999999999987665 6778889999
Q ss_pred CeEEEEEec-CCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCC-ceeEEEEe
Q 027664 154 RKIVGGSLI-GGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADV-RYRFVIDV 212 (220)
Q Consensus 154 ~~~~~~~~~-~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~-~gk~vv~~ 212 (220)
++++.|+.. ....+++.+++++++|++++. + +.++++++++|++.+.+... ..|+++.+
T Consensus 287 el~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 287 ELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred ccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 999999965 555789999999999999976 3 78999999999999988654 46888764
No 34
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.96 E-value=1.2e-27 Score=188.41 Aligned_cols=197 Identities=18% Similarity=0.172 Sum_probs=156.7
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
++|++.++++|++++++. +.++ .+.|||+++.+.. .++++++|+|+|++|++++|+|+++|++ |++++.++++++
T Consensus 108 ~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~--~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~ 183 (308)
T TIGR01202 108 VTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAE--VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRD 183 (308)
T ss_pred EcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcc--cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 578899999999999764 4444 4689999987642 4688999999999999999999999996 445555544433
Q ss_pred HHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEE
Q 027664 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGS 160 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 160 (220)
.+ +...++|+.+. ..+++|++|||+|++..++.++++++++|+++.+|......+++...++.+++++.++
T Consensus 184 ~a----~~~~~i~~~~~-----~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~ 254 (308)
T TIGR01202 184 GA----TGYEVLDPEKD-----PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIA 254 (308)
T ss_pred hh----hhccccChhhc-----cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEe
Confidence 32 22344554321 2247999999999976789999999999999999987655667777778889999998
Q ss_pred ecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 161 LIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 161 ~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.....++++.+++++++|++++. + ++|+|+++++|++.+.++...+|++++
T Consensus 255 ~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 255 AEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 87777889999999999999874 4 899999999999988776667899874
No 35
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.96 E-value=3.2e-27 Score=187.39 Aligned_cols=205 Identities=17% Similarity=0.220 Sum_probs=166.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEE-c-cchhHHHHHHHHHHCCCeEEEEeCCccch
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-G-LGGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G-~g~~G~~~~~la~~~g~~vi~~~~~~~~~ 79 (220)
++|++.++++|+++++++++++++.+.|||.++... .+ +++.++|+ | +|++|++++|+|+.+|++|++++.+++++
T Consensus 104 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~-~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~ 181 (324)
T cd08291 104 VADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETA-RE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQV 181 (324)
T ss_pred eecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhh-cc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 578889999999999999999999999998655433 33 55566665 4 59999999999999999999999888777
Q ss_pred HHHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-C-CCCchhhhc
Q 027664 80 SEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-L-ELPAFPLLT 152 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~ 152 (220)
+.+ +++|+++++++.+.+ .+++.++ ++|++|||+|+. .....+++++++|+++.+|..... . .++...++.
T Consensus 182 ~~~-~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 259 (324)
T cd08291 182 DLL-KKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIF 259 (324)
T ss_pred HHH-HHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhh
Confidence 666 679999999877643 3444443 799999999987 467789999999999999875432 2 355666788
Q ss_pred CCeEEEEEecCC------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 153 GRKIVGGSLIGG------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 153 ~~~~~~~~~~~~------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+++++.+++... .++++.++++++ +.+++.+ ++|+|+++++|++.+.+++..||+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 260 KNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred cCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 999998887543 346778888888 8898887 899999999999999998888999873
No 36
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.95 E-value=7.3e-27 Score=187.94 Aligned_cols=209 Identities=25% Similarity=0.303 Sum_probs=172.6
Q ss_pred ccccc-ceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccch
Q 027664 2 VADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (220)
Q Consensus 2 ~v~~~-~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~ 79 (220)
.++++ .++++|+++++++++++++.+.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.
T Consensus 136 ~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~ 215 (361)
T cd08231 136 YLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERL 215 (361)
T ss_pred EecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 35564 7999999999999999989999999999888866799999999999999999999999999 999998887766
Q ss_pred HHHHHHcCCCEEEcCCCH------HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchh
Q 027664 80 SEAVERLGADSFLVSRDQ------DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFP 149 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~------~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~ 149 (220)
..+ +++|++.++++.+. ..+.+.++ ++|++|||+|+...+..++++++++|+++.+|.... ..++++..
T Consensus 216 ~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 294 (361)
T cd08231 216 ELA-REFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPER 294 (361)
T ss_pred HHH-HHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHH
Confidence 555 78999988877642 13445543 799999999876568899999999999999997643 23455556
Q ss_pred hhcCCeEEEEEecCCHHHHHHHHHHHHcC--CCc--cce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 150 LLTGRKIVGGSLIGGLKETQEMIDFAAKH--NIR--ADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~g--~i~--~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
++.+++++.+++..+.++++++++++.++ .+. +.+ ++|+++++++|++.+++++ .+|+|+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 361 (361)
T cd08231 295 IVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGT-ALKVVIDP 361 (361)
T ss_pred HhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceEEEeCC
Confidence 68899999999887778899999999887 443 334 7899999999999998877 48999863
No 37
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.95 E-value=5.1e-27 Score=188.44 Aligned_cols=205 Identities=21% Similarity=0.290 Sum_probs=157.1
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhh------cCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeC-
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY------GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST- 74 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~------~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~- 74 (220)
+++++.++++|++++ +. +++.....+++.++... ..+++|++|+|+|+|++|++++|+|++.|++|+++++
T Consensus 128 ~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 128 VDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred EeccccEEECCCCCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Confidence 578899999999999 44 44555555555444322 1246899999999999999999999999999999887
Q ss_pred --CccchHHHHHHcCCCEEEcCCCHHHH-HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCC---
Q 027664 75 --SPSKKSEAVERLGADSFLVSRDQDEM-QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELP--- 146 (220)
Q Consensus 75 --~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~--- 146 (220)
++++++ +++++|++. +++.+.+.. ....+++|++|||+|.+..+..++++++++|+++.+|...+ ..+++
T Consensus 206 ~~~~~~~~-~~~~~Ga~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~ 283 (355)
T cd08230 206 DPPDPKAD-IVEELGATY-VNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGE 283 (355)
T ss_pred CCCHHHHH-HHHHcCCEE-ecCCccchhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhh
Confidence 444544 557899987 455443211 12234899999999987678999999999999999998665 23444
Q ss_pred -chhhhcCCeEEEEEecCCHHHHHHHHHHHHcCC------Cccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 147 -AFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHN------IRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~------i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
...++.+++++.|++..+.++++++++++.++. +.+.+ ++|+++++++||+.++++. +|+++++
T Consensus 284 ~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 284 LNRDLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hhhhHhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 345788999999998877788999999998876 44445 8999999999999886544 6999864
No 38
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.95 E-value=1.3e-26 Score=185.07 Aligned_cols=209 Identities=32% Similarity=0.456 Sum_probs=176.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhh-cCCCCCCEEEEEccchhHHHHHHHHHHCC-CeEEEEeCCccch
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~la~~~g-~~vi~~~~~~~~~ 79 (220)
.++++.++++|+++++++++++++.+.|||+++... ..+.++++|||+|+|++|++++++|+..| .+|++++.++++.
T Consensus 126 ~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~ 205 (340)
T cd05284 126 LVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEAL 205 (340)
T ss_pred EecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 467789999999999999999999999999999876 45788999999999779999999999999 7999998888777
Q ss_pred HHHHHHcCCCEEEcCCCH--HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCe
Q 027664 80 SEAVERLGADSFLVSRDQ--DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRK 155 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~--~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (220)
+.+ +++|+++++++.+. +.+++..+ ++|+++||+|+....+.++++++++|+++.+|.... ..++....+.++.
T Consensus 206 ~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~ 283 (340)
T cd05284 206 KLA-ERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEI 283 (340)
T ss_pred HHH-HHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcce
Confidence 666 78999999887764 33444443 699999999975578899999999999999986553 3444444467889
Q ss_pred EEEEEecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 156 IVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
++.+........++.+++++++|.+.+.++.|+++++++|++.+.+++..||+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 284 SVIGSLWGTRAELVEVVALAESGKVKVEITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred EEEEEecccHHHHHHHHHHHHhCCCCcceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 998887767788899999999999987668899999999999999988889998753
No 39
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.95 E-value=2.5e-27 Score=184.26 Aligned_cols=189 Identities=23% Similarity=0.271 Sum_probs=157.1
Q ss_pred ccccc-ceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccch
Q 027664 2 VADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (220)
Q Consensus 2 ~v~~~-~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~ 79 (220)
++|++ .++++|+++++++++++++.+.|+|++++... ..+|++|+|+|+|++|++++|+|+++|++ |++++.+++++
T Consensus 80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~-~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhcc-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 46776 69999999999999999999999999998776 46999999999999999999999999995 88887676655
Q ss_pred HHHHHHcCCCEEEcCCCH-HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC--CCCCCCchhhhcCC
Q 027664 80 SEAVERLGADSFLVSRDQ-DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTGR 154 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~-~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~ 154 (220)
++++++|++.++++.+. +.+.+.++ ++|++|||+|.+..++.++++++++|+++.+|... .+.++++..++.++
T Consensus 159 -~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~ 237 (280)
T TIGR03366 159 -ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW 237 (280)
T ss_pred -HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence 45578999998886553 33444443 79999999998777899999999999999999753 24577788889999
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcC--CCcc--ce-EEeecccH
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKH--NIRA--DI-EVIPADYV 192 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g--~i~~--~~-~~~~~~~~ 192 (220)
+++.|++.++.++++++++++.++ +++. .+ ++|+++++
T Consensus 238 ~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 238 LTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 999999988888999999999985 4443 24 78998863
No 40
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.95 E-value=3.1e-26 Score=183.20 Aligned_cols=210 Identities=15% Similarity=0.176 Sum_probs=161.5
Q ss_pred cccccceEeCCCCCCccc----cccccchhhhhhhHHHhhcCCCCC--CEEEEEcc-chhHHHHHHHHHHCCC-eEEEEe
Q 027664 2 VADEHFVVRIPEGAPLDA----TAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVIS 73 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~----aa~~~~~~~ta~~~l~~~~~~~~~--~~vlI~G~-g~~G~~~~~la~~~g~-~vi~~~ 73 (220)
+++++.++++|+++++++ +++++.++.|||+++.....+++| ++|||+|+ |++|++++|+|+++|+ +|++++
T Consensus 108 ~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~ 187 (345)
T cd08293 108 VLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGIC 187 (345)
T ss_pred EecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEc
Confidence 578899999999865443 456788899999999777667776 99999997 9999999999999999 899999
Q ss_pred CCccchHHHHHHcCCCEEEcCCCH---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC---CCC--
Q 027664 74 TSPSKKSEAVERLGADSFLVSRDQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK---PLE-- 144 (220)
Q Consensus 74 ~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~-- 144 (220)
.++++.+.+.+.+|++.++++.+. +.+++.++ ++|++|||+|+. .+..++++++++|+++.+|.... ...
T Consensus 188 ~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~ 266 (345)
T cd08293 188 GSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYP 266 (345)
T ss_pred CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCcc
Confidence 998887777556999999988764 33445444 899999999987 57899999999999999985321 111
Q ss_pred --CCc--hhh-hcCCeEEEEEecCC-----HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 145 --LPA--FPL-LTGRKIVGGSLIGG-----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 145 --~~~--~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
+.. ..+ ..+++++.+..... .+.++.+++++++|.+++.+ ..++++++++|++.+.+++..||+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 267 PPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred ccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 111 111 22344443332211 23467788899999998776 5679999999999999988889999864
No 41
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.95 E-value=2.9e-26 Score=171.67 Aligned_cols=211 Identities=23% Similarity=0.218 Sum_probs=173.3
Q ss_pred ccccceEeCCCCCCc--cccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccch
Q 027664 3 ADEHFVVRIPEGAPL--DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (220)
Q Consensus 3 v~~~~~~~ip~~~s~--~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~ 79 (220)
++.+.+.|++++.-+ .....+..++.|||.+|.+++..++|++|+|-|| |++|..+.|+||..|++|+.++..++|.
T Consensus 109 ~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~ 188 (340)
T COG2130 109 SDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKC 188 (340)
T ss_pred echhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHH
Confidence 455667777654321 2223688899999999999999999999999987 9999999999999999999999999998
Q ss_pred HHHHHHcCCCEEEcCCCHHHHH---Hhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC---C-CC---CCch
Q 027664 80 SEAVERLGADSFLVSRDQDEMQ---AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK---P-LE---LPAF 148 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~~~~~---~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~-~~---~~~~ 148 (220)
..+...+|.|.++|+..++.-+ +.. +|+|+.||++|++ .++..+..|+..+|++.+|..+. + .. -...
T Consensus 189 ~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~ 267 (340)
T COG2130 189 DFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLP 267 (340)
T ss_pred HHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhh
Confidence 8887779999999999875433 332 4999999999998 79999999999999999998753 1 11 1223
Q ss_pred hhhcCCeEEEEEecCC------HHHHHHHHHHHHcCCCccceE-EeecccHHHHHHHHHcCCCceeEEEEeCC
Q 027664 149 PLLTGRKIVGGSLIGG------LKETQEMIDFAAKHNIRADIE-VIPADYVNTAMERLAKADVRYRFVIDVAN 214 (220)
Q Consensus 149 ~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~g~i~~~~~-~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 214 (220)
.++.+.+++.|+.... .+..+++..++.+|+|+.... .-.||++++||.-+.+++.+||.|+++.+
T Consensus 268 ~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 268 LLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 4577799999987722 255788999999999999874 44699999999999999999999999853
No 42
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.95 E-value=5.3e-26 Score=181.38 Aligned_cols=210 Identities=25% Similarity=0.481 Sum_probs=174.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHH-CCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~-~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|++++++++++++..+.|||+++. ...+++|++|+|+|+|++|++++++|++ .|++|+++++++++++
T Consensus 123 ~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~ 201 (338)
T PRK09422 123 IVTADYAVKVPEGLDPAQASSITCAGVTTYKAIK-VSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLA 201 (338)
T ss_pred EEchHHeEeCCCCCCHHHeehhhcchhHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 3567789999999999999999999999999984 4458999999999999999999999998 5999999999988877
Q ss_pred HHHHHcCCCEEEcCCC-H---HHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeE
Q 027664 81 EAVERLGADSFLVSRD-Q---DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKI 156 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~-~---~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
.+ +++|++.++++.+ . +.+.+..+++|.++++.++...+..++++++.+|+++.+|......+++...+..+..+
T Consensus 202 ~~-~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 280 (338)
T PRK09422 202 LA-KEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIE 280 (338)
T ss_pred HH-HHcCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcE
Confidence 77 7899999988754 2 33444555789666555555578999999999999999987654455566666778888
Q ss_pred EEEEecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEeC
Q 027664 157 VGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 213 (220)
+.++.....++++.+++++++|.+.+.++.++++++++|++.+.++...||+++.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 281 VVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred EEEecCCCHHHHHHHHHHHHhCCCCccEEEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 888776667889999999999998776677899999999999999888899998764
No 43
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.95 E-value=3.7e-26 Score=186.50 Aligned_cols=209 Identities=18% Similarity=0.224 Sum_probs=163.0
Q ss_pred ceEeCCCCCCccccccc-c--chhhhhhhHHH--------hhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCC---eEEE
Q 027664 7 FVVRIPEGAPLDATAPL-L--CAGITVYSPLR--------FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTV 71 (220)
Q Consensus 7 ~~~~ip~~~s~~~aa~~-~--~~~~ta~~~l~--------~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~---~vi~ 71 (220)
.++++|+++++++|+.+ + +. .+++.++. ....+++|++|+|+|+ |++|++++|+|++.|+ +|++
T Consensus 130 ~~~~lP~~l~~~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~ 208 (410)
T cd08238 130 DCLLIYEGDGYAEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVV 208 (410)
T ss_pred CeEECCCCCCHHHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEE
Confidence 58999999999998854 2 22 22333322 3345789999999985 9999999999999754 7999
Q ss_pred EeCCccchHHHHHHc--------CCC-EEEcCCC-H---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 027664 72 ISTSPSKKSEAVERL--------GAD-SFLVSRD-Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 72 ~~~~~~~~~~~~~~~--------g~~-~~~~~~~-~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (220)
++.++++++.+ +++ |++ .++++.+ . +.++++++ ++|++||++|....+..++++++++|+++.+
T Consensus 209 ~~~~~~r~~~a-~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~ 287 (410)
T cd08238 209 TDVNDERLARA-QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFF 287 (410)
T ss_pred EcCCHHHHHHH-HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEE
Confidence 99998887766 455 665 5677643 2 23455554 7999999999877889999999999988776
Q ss_pred CCC-CC--CCCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 137 GAP-EK--PLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 137 g~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
+.. .. ..+++...++.+++++.|++.....+++++++++++|++++. + ++|+|+++++|++.+. ++..||+|+
T Consensus 288 ~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl 366 (410)
T cd08238 288 AGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLI 366 (410)
T ss_pred EccCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEE
Confidence 442 22 246677788899999999988788899999999999999984 4 8999999999999999 667799999
Q ss_pred EeCCcccc
Q 027664 211 DVANTMKS 218 (220)
Q Consensus 211 ~~~~~~~~ 218 (220)
.++..++.
T Consensus 367 ~~~~~~~~ 374 (410)
T cd08238 367 YTQKPLPL 374 (410)
T ss_pred ECCCCCCC
Confidence 98665443
No 44
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.95 E-value=5.6e-26 Score=184.72 Aligned_cols=208 Identities=20% Similarity=0.252 Sum_probs=174.2
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhh--cCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~ 78 (220)
.++...++++|+++++++++.+++.+.|||+++... ..++++++|+|+|+ |++|++++++|++.|+++++++.++++
T Consensus 151 ~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~ 230 (393)
T cd08246 151 LVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEK 230 (393)
T ss_pred EechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 467789999999999999999999999999998765 45789999999997 999999999999999998888888877
Q ss_pred hHHHHHHcCCCEEEcCCCH-------------------------HHHHHhcC---CccEEEEcCCCcccHHHHHhccccC
Q 027664 79 KSEAVERLGADSFLVSRDQ-------------------------DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQ 130 (220)
Q Consensus 79 ~~~~~~~~g~~~~~~~~~~-------------------------~~~~~~~~---~~d~v~d~~g~~~~~~~~~~~l~~~ 130 (220)
++.+ +++|++.++++.+. +.+.++++ ++|++|||+|.. .+..++++++++
T Consensus 231 ~~~~-~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~ 308 (393)
T cd08246 231 AEYC-RALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRG 308 (393)
T ss_pred HHHH-HHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccC
Confidence 7666 67999988876331 12334443 699999999985 688999999999
Q ss_pred CEEEEeCCCCC-CCCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcC-CCcee
Q 027664 131 GKLVLLGAPEK-PLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKA-DVRYR 207 (220)
Q Consensus 131 G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~-~~~gk 207 (220)
|+++.+|.... ...++...+..++.++.+.+....+++..++++++++.+.+.+ ++|+++++++|++.+.++ ...||
T Consensus 309 G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gk 388 (393)
T cd08246 309 GMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGN 388 (393)
T ss_pred CEEEEEcccCCCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccce
Confidence 99999986543 2455666677788889998887778899999999999998766 899999999999999988 67789
Q ss_pred EEEE
Q 027664 208 FVID 211 (220)
Q Consensus 208 ~vv~ 211 (220)
+++-
T Consensus 389 vvv~ 392 (393)
T cd08246 389 MAVL 392 (393)
T ss_pred EEEe
Confidence 8863
No 45
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.95 E-value=6.4e-26 Score=179.81 Aligned_cols=207 Identities=20% Similarity=0.279 Sum_probs=172.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.+++..++++|+++++++++++++.+.++|+++.. ..+++|++|+|+|+ |.+|++++|+|+++|+++++++.++++++
T Consensus 100 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~ 178 (324)
T cd08292 100 VAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA 178 (324)
T ss_pred EEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 46778999999999999999999999999998865 55899999999987 99999999999999999999999988877
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (220)
.+ +.+|++.++++.+.+ .+.+.++ ++|++|||+|+. ....++++++++|+++.+|.... ..+++....+.++
T Consensus 179 ~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (324)
T cd08292 179 EL-RALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQ 256 (324)
T ss_pred HH-HhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCC
Confidence 77 458999888877643 3444444 799999999987 67899999999999999987533 3455555567789
Q ss_pred eEEEEEecCC----------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 KIVGGSLIGG----------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~~~~~~~~~----------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.++.... ...++.+++++.+|.+.+.+ +.|+++++++|++.+.++...+|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 257 ATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred CEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 9998876542 24578889999999998666 799999999999999888777898864
No 46
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.94 E-value=1.3e-25 Score=182.75 Aligned_cols=214 Identities=21% Similarity=0.259 Sum_probs=178.7
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHh--hcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRF--YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~ 78 (220)
.++++.++++|+++++++++.+.+.+.+||+++.. ...+.+|++++|+|+ |++|++++++|+++|+++++++.++++
T Consensus 147 ~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~ 226 (398)
T TIGR01751 147 LVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK 226 (398)
T ss_pred EechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence 46778899999999999999999999999999865 355789999999997 999999999999999998888888776
Q ss_pred hHHHHHHcCCCEEEcCCCH-------------------------HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCC
Q 027664 79 KSEAVERLGADSFLVSRDQ-------------------------DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQG 131 (220)
Q Consensus 79 ~~~~~~~~g~~~~~~~~~~-------------------------~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G 131 (220)
++.+ +++|++.++|+.+. +.+.+.++ ++|++|||+|.. .+...+++++++|
T Consensus 227 ~~~~-~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G 304 (398)
T TIGR01751 227 AEYC-RELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGG 304 (398)
T ss_pred HHHH-HHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCC
Confidence 6655 67999999986532 11223333 699999999975 6888999999999
Q ss_pred EEEEeCCCCCC-CCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEE
Q 027664 132 KLVLLGAPEKP-LELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFV 209 (220)
Q Consensus 132 ~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~v 209 (220)
+++.+|..... .+++...++.++.++.+......+++++++++++++.+.+.+ +++++++++++++.+.+++..||+|
T Consensus 305 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvv 384 (398)
T TIGR01751 305 MVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVA 384 (398)
T ss_pred EEEEEccccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEE
Confidence 99999876542 455666667778888888777777788999999999998767 8999999999999999999889999
Q ss_pred EEeCCccc
Q 027664 210 IDVANTMK 217 (220)
Q Consensus 210 v~~~~~~~ 217 (220)
+.++.+.+
T Consensus 385 v~~~~~~~ 392 (398)
T TIGR01751 385 VLVLAPRP 392 (398)
T ss_pred EEeCCCCC
Confidence 99986654
No 47
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.94 E-value=1.2e-25 Score=180.19 Aligned_cols=209 Identities=28% Similarity=0.374 Sum_probs=174.6
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++++++.+.|||++++....++++++|+|+|+|++|++++|+|+..|+ +|++++.++++..
T Consensus 135 ~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~ 214 (350)
T cd08240 135 IVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLE 214 (350)
T ss_pred EecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 456678899999999999999999999999999888766789999999889999999999999999 7888888777666
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeE
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKI 156 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
.+ +++|++.+++..+.+ .+.+..+ ++|++||++|....+..++++++++|+++.+|........+......++.+
T Consensus 215 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 293 (350)
T cd08240 215 AA-KAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALT 293 (350)
T ss_pred HH-HHhCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcE
Confidence 65 779998888876532 3343333 799999999975578999999999999999987654433444445558889
Q ss_pred EEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 157 VGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+.+.+....+++..+++++++|.+.+.+ ..|+++++++|++.+.+++..+|++++
T Consensus 294 i~~~~~~~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 294 IQGSYVGSLEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEEcccCCHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 9988877778899999999999988655 789999999999999988888999875
No 48
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.94 E-value=1.7e-25 Score=178.74 Aligned_cols=209 Identities=34% Similarity=0.603 Sum_probs=178.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++++.++++|++++++++++++..+.|||+++... .+++++++||+|+ +.+|++++++|++.|++|++++.++++.+
T Consensus 126 ~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 204 (341)
T cd08297 126 IADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE 204 (341)
T ss_pred EeccccEEECCCCCCHHHHHHHHcchHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998776 5899999999997 67999999999999999999999988777
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +.+|++.++++.+.+ .+.+.. +++|+++||.+.......++++++.+|+++.+|..... .+++...+..++
T Consensus 205 ~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 283 (341)
T cd08297 205 LA-KELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRG 283 (341)
T ss_pred HH-HHcCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcc
Confidence 66 679999998877643 344443 37999999887666788999999999999999876543 355556667889
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.++.+......++++.++++++++.+.+.++.|++++++++++.+..+...||+++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 284 ITIVGSLVGTRQDLQEALEFAARGKVKPHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred cEEEEeccCCHHHHHHHHHHHHcCCCcceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9998877666788999999999999987668899999999999999988889999875
No 49
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.94 E-value=2.2e-25 Score=180.57 Aligned_cols=209 Identities=16% Similarity=0.203 Sum_probs=156.2
Q ss_pred cccc--cceEeCCCCCCc----cccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEE-eC
Q 027664 2 VADE--HFVVRIPEGAPL----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVI-ST 74 (220)
Q Consensus 2 ~v~~--~~~~~ip~~~s~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~-~~ 74 (220)
++|+ .+++++|++++. ++++++.+.+.++|+++... .+++|++|+|.|+|++|++++|+|+.+|++++++ +.
T Consensus 140 ~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~-~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~ 218 (393)
T TIGR02819 140 MVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTA-GVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDL 218 (393)
T ss_pred EechhhCceEECCCcccccccccceeeeccHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Confidence 4554 369999998754 45678888999999998764 5799999999889999999999999999975554 44
Q ss_pred CccchHHHHHHcCCCEEEcCCCH---HHHHHhcC--CccEEEEcCCCc--------------ccHHHHHhccccCCEEEE
Q 027664 75 SPSKKSEAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVL 135 (220)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~--------------~~~~~~~~~l~~~G~~v~ 135 (220)
+++++ ++++++|++.+....+. +.+.+.++ ++|++|||+|.+ ..++.++++++++|+++.
T Consensus 219 ~~~r~-~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~ 297 (393)
T TIGR02819 219 NPARL-AQARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGI 297 (393)
T ss_pred CHHHH-HHHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEE
Confidence 55454 45578999754332222 33555554 799999999986 368999999999999999
Q ss_pred eCCCC-CCC------------CCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccc--e--EEeecccHHHHHHH
Q 027664 136 LGAPE-KPL------------ELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I--EVIPADYVNTAMER 198 (220)
Q Consensus 136 ~g~~~-~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~--~~~~~~~~~~a~~~ 198 (220)
+|... +.. ++.....+.+++++.+......+.+..+++++.+|++++. + ++|+|+++++||+.
T Consensus 298 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~ 377 (393)
T TIGR02819 298 PGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE 377 (393)
T ss_pred eeecCCcccccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence 99863 211 2223344566677776543333444789999999999863 3 68999999999999
Q ss_pred HHcCCCceeEEEEeC
Q 027664 199 LAKADVRYRFVIDVA 213 (220)
Q Consensus 199 ~~~~~~~gk~vv~~~ 213 (220)
+.++. .+|+++.++
T Consensus 378 ~~~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 378 FDAGA-AKKFVIDPH 391 (393)
T ss_pred HhhCC-ceEEEEeCC
Confidence 98775 489999874
No 50
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=2.2e-25 Score=178.60 Aligned_cols=207 Identities=22% Similarity=0.262 Sum_probs=172.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++++++.+.|||+++. ...+++|++++|+|+ |++|++++++|++.|++++.++.++ +++
T Consensus 138 ~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~ 215 (350)
T cd08274 138 VVPAENAYPVNSPLSDVELATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEE 215 (350)
T ss_pred EecHHHceeCCCCCCHHHHHhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhH
Confidence 4677889999999999999999999999999984 455899999999998 9999999999999999998888665 555
Q ss_pred HHHHHcCCCEEEcCCCHHHH-HHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCCeE
Q 027664 81 EAVERLGADSFLVSRDQDEM-QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGRKI 156 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~-~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~ 156 (220)
.+ +.+|++.+++..+.... ...+ +++|++|||+|+. .++.++++++++|+++.+|..... ..++...++.++.+
T Consensus 216 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 293 (350)
T cd08274 216 AV-RALGADTVILRDAPLLADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLT 293 (350)
T ss_pred HH-HhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceE
Confidence 55 78998766654432211 2222 2799999999986 689999999999999999866443 46666677889999
Q ss_pred EEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 157 VGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
+.++.......++++++++.++.+.+.+ +.|+++++++|++.+..+...+|+|+++
T Consensus 294 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 294 LFGSTLGTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred EEEeecCCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 9998887788899999999999998766 8899999999999999888789998863
No 51
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.94 E-value=3.1e-25 Score=176.84 Aligned_cols=210 Identities=32% Similarity=0.430 Sum_probs=179.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++.+.++++|++++++++++++..+.|||+++.....+++++++||.|+|.+|++++++|+..|++|++++.++++.+.
T Consensus 125 ~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~ 204 (338)
T cd08254 125 VVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLEL 204 (338)
T ss_pred EechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 46678899999999999999999999999999988877899999999888999999999999999999999998877766
Q ss_pred HHHHcCCCEEEcCCCHH---HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEE
Q 027664 82 AVERLGADSFLVSRDQD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIV 157 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (220)
+ +.+|++.+++..+.. .+.... +++|+++||+|....++.++++++++|+++.+|.......++...+..++.++
T Consensus 205 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 283 (338)
T cd08254 205 A-KELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRI 283 (338)
T ss_pred H-HHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEE
Confidence 6 678998888766532 231222 27999999998766788999999999999999876544556666778888889
Q ss_pred EEEecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 158 GGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.+++....+.+..++++++++.+.+.++.+++++++++++.+.+++..+|+|+++
T Consensus 284 ~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 284 IGSFGGTPEDLPEVLDLIAKGKLDPQVETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred EEeccCCHHHHHHHHHHHHcCCCcccceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9888777788999999999999886678899999999999999998889999864
No 52
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.94 E-value=9e-25 Score=162.35 Aligned_cols=211 Identities=20% Similarity=0.268 Sum_probs=174.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
+.+++.++++++.++++.||++....+|||.+|.+.-.+++|++|+-.|+ +.+|++++|+|+++|++-+.++++....+
T Consensus 120 v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ie 199 (354)
T KOG0025|consen 120 VFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIE 199 (354)
T ss_pred eecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHH
Confidence 46788999999999999999999999999999999888999999999998 99999999999999999998888877655
Q ss_pred HHH---HHcCCCEEEcCCCHH--HHHHh---cCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhh
Q 027664 81 EAV---ERLGADSFLVSRDQD--EMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLL 151 (220)
Q Consensus 81 ~~~---~~~g~~~~~~~~~~~--~~~~~---~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~ 151 (220)
+++ +.+|+++++...+.. ...+. ..++.+.|||+|+.+ .....+.|.+||.++.+|.+.. +.+++...+.
T Consensus 200 el~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lI 278 (354)
T KOG0025|consen 200 ELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLI 278 (354)
T ss_pred HHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchhe
Confidence 553 467999998544321 12222 227999999999984 6788899999999999999875 5888888999
Q ss_pred cCCeEEEEEecCCH-----------HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcC-CCceeEEEEeC
Q 027664 152 TGRKIVGGSLIGGL-----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKA-DVRYRFVIDVA 213 (220)
Q Consensus 152 ~~~~~~~~~~~~~~-----------~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~-~~~gk~vv~~~ 213 (220)
.|.+.+.|+|...| +.+.++.++++.|+++.+. +..+|++...|++...+. ...||-++.++
T Consensus 279 FKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 279 FKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred eccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 99999999998654 3367788999999999876 788999999999855443 33467776653
No 53
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.94 E-value=8e-25 Score=176.31 Aligned_cols=208 Identities=24% Similarity=0.358 Sum_probs=169.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++++++++.||+.++.....++++++|+|+|+|++|++++|+|++.|+ ++++++.++++.+
T Consensus 146 ~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~ 225 (365)
T cd08278 146 VVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLE 225 (365)
T ss_pred EecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998777778999999999889999999999999999 5777777776655
Q ss_pred HHHHHcCCCEEEcCCCH---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC--CCCCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~ 154 (220)
+.+.+|++.++++.+. +.+.+..+ ++|+++||+|....+..++++++++|+++.+|... ....++...++.++
T Consensus 226 -~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 304 (365)
T cd08278 226 -LAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSG 304 (365)
T ss_pred -HHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcC
Confidence 4478999999887653 23444333 79999999997667899999999999999998753 23456666666788
Q ss_pred eEEEEEecCC---HHHHHHHHHHHHcCCCcc-ce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 KIVGGSLIGG---LKETQEMIDFAAKHNIRA-DI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~~~~~~~~~---~~~~~~~~~~i~~g~i~~-~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.++.... .+.++.+++++++|.+.+ .+ ..|+++++++|++.+++++. .|++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 305 KTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred ceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence 8888775432 355688899999999865 34 78999999999999988765 487763
No 54
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.94 E-value=5.6e-25 Score=177.39 Aligned_cols=209 Identities=23% Similarity=0.405 Sum_probs=172.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.++++++..+.|||+++.....+.++++|+|+|+|++|++++++|++.|++ +++++.++++.+
T Consensus 147 ~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~ 226 (367)
T cd08263 147 VVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLA 226 (367)
T ss_pred EechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 4567899999999999999999999999999998887788999999998899999999999999997 888888877666
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchhhhcC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (220)
.+ +.+|++.++++.+.+ .+.+.. .++|++|||+|+......++++++++|+++.+|.... ...++...++.+
T Consensus 227 ~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 305 (367)
T cd08263 227 KA-KELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRR 305 (367)
T ss_pred HH-HHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhC
Confidence 55 779999999876543 344443 2799999999986457889999999999999986543 234555555578
Q ss_pred CeEEEEEecCC-HHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 154 RKIVGGSLIGG-LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 154 ~~~~~~~~~~~-~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+.++.++.... .+.++.++++++++.+.+. + +.|++++++++++.+++++..||+|+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 306 GIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 88887765433 4678899999999998864 3 789999999999999998888999874
No 55
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.94 E-value=1.3e-24 Score=173.82 Aligned_cols=204 Identities=23% Similarity=0.284 Sum_probs=172.6
Q ss_pred ceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc
Q 027664 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86 (220)
Q Consensus 7 ~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~ 86 (220)
.++++|++++++++++++..+.|||+++.....+.++++++|+|+|++|++++++|+..|++|++++.++++++.+ +.+
T Consensus 130 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~ 208 (345)
T cd08260 130 NLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-REL 208 (345)
T ss_pred ceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHh
Confidence 8999999999999999999999999998766678899999999999999999999999999999999998887777 679
Q ss_pred CCCEEEcCCC-HHH---HHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC---CCCCchhhhcCCeEEE
Q 027664 87 GADSFLVSRD-QDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP---LELPAFPLLTGRKIVG 158 (220)
Q Consensus 87 g~~~~~~~~~-~~~---~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~ 158 (220)
|++.++++.+ .+. +.+... ++|++|||+|....+...+++++++|+++.+|..... ..++...+..++.++.
T Consensus 209 g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08260 209 GAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIV 288 (345)
T ss_pred CCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEE
Confidence 9999998876 332 333333 7999999999655688899999999999999876432 3445555567888888
Q ss_pred EEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 159 GSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+........++.++++++++.+.+. + +.++++++++|++.++++...+|+|++
T Consensus 289 ~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 289 GSHGMPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred eCCcCCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 8877777889999999999998753 4 789999999999999998888998864
No 56
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.94 E-value=6.7e-25 Score=175.94 Aligned_cols=205 Identities=18% Similarity=0.247 Sum_probs=163.0
Q ss_pred cceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHH
Q 027664 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (220)
Q Consensus 6 ~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~ 84 (220)
..++++|+++++++++.++..+.||++++... .+++|++|||+|+|++|++++|+|+++|+ .+++++.++++. .+.+
T Consensus 131 ~~~~~lP~~~~~~~aa~~~~~~~ta~~~~~~~-~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~-~~~~ 208 (351)
T cd08285 131 ANLAPLPDGLTDEQAVMLPDMMSTGFHGAELA-NIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRV-ELAK 208 (351)
T ss_pred CceEECCCCCCHHHhhhhccchhhHHHHHHcc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHH
Confidence 37999999999999999999999999997544 57999999999989999999999999999 577777777655 4447
Q ss_pred HcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC--CCCCc--hhhhcCCe
Q 027664 85 RLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPA--FPLLTGRK 155 (220)
Q Consensus 85 ~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~--~~~~~~~~ 155 (220)
++|++.++++.+.+ .+.+... ++|++|||+|+...+..++++++++|+++.+|..... ..++. +....+..
T Consensus 209 ~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T cd08285 209 EYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHK 288 (351)
T ss_pred HcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhcccc
Confidence 89999999876543 3444443 7999999999866789999999999999999876543 23332 22234566
Q ss_pred EEEEEecC-CHHHHHHHHHHHHcCCCccc---e-EEeecccHHHHHHHHHcCCC-ceeEEEEe
Q 027664 156 IVGGSLIG-GLKETQEMIDFAAKHNIRAD---I-EVIPADYVNTAMERLAKADV-RYRFVIDV 212 (220)
Q Consensus 156 ~~~~~~~~-~~~~~~~~~~~i~~g~i~~~---~-~~~~~~~~~~a~~~~~~~~~-~gk~vv~~ 212 (220)
++.+.+.. ..++++++++++++|++++. + +.++++++++|++.+++++. ..|+++++
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 289 TINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred EEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 66665543 45678899999999999982 3 46999999999999998874 68999864
No 57
>PRK10083 putative oxidoreductase; Provisional
Probab=99.93 E-value=1.4e-24 Score=173.26 Aligned_cols=209 Identities=18% Similarity=0.158 Sum_probs=162.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHH-CCCe-EEEEeCCccch
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVK-VTVISTSPSKK 79 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~-~g~~-vi~~~~~~~~~ 79 (220)
.++...++++|+++++++++ +...+.+++.+.. ..++++|++|+|+|+|++|++++|+|+. +|++ ++++++++++.
T Consensus 122 ~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~ 199 (339)
T PRK10083 122 VVPAKNAHRIPDAIADQYAV-MVEPFTIAANVTG-RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERL 199 (339)
T ss_pred EechHHeEECcCCCCHHHHh-hhchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHH
Confidence 46778899999999998876 5567777886554 4458999999999999999999999996 6995 66666666555
Q ss_pred HHHHHHcCCCEEEcCCCHHHHHHhcC---CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeE
Q 027664 80 SEAVERLGADSFLVSRDQDEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKI 156 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~~~~~~~~~---~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
+ +++++|++.++++.+.+..+.+.+ ++|++|||+|.+..+..++++++++|+++.+|.......++...+..++++
T Consensus 200 ~-~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 278 (339)
T PRK10083 200 A-LAKESGADWVINNAQEPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELS 278 (339)
T ss_pred H-HHHHhCCcEEecCccccHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceE
Confidence 4 447899999998765433333322 467999999976578999999999999999987654334445555667788
Q ss_pred EEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCC-CceeEEEEeCC
Q 027664 157 VGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKAD-VRYRFVIDVAN 214 (220)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~-~~gk~vv~~~~ 214 (220)
+.+... ....++.+++++++|++.+. + +.|+++++++|++.++++. ..+|+++.+.+
T Consensus 279 ~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 279 IFSSRL-NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred EEEEec-ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 777654 44678999999999999873 4 8999999999999998654 45899998764
No 58
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.93 E-value=2e-24 Score=172.20 Aligned_cols=207 Identities=22% Similarity=0.281 Sum_probs=168.9
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++++ ++++|+++++++++++ ..+.++++++ ....+.+|++|||+|+|.+|.+++|+|+.+|++|++++.++++...
T Consensus 122 ~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~ 198 (337)
T cd08261 122 VVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEF 198 (337)
T ss_pred Eechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHH
Confidence 45677 9999999999999876 5677888887 4556899999999988999999999999999999999888777665
Q ss_pred HHHHcCCCEEEcCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeE
Q 027664 82 AVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKI 156 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
+ +++|+++++++.+. +.+.+..+ ++|++|||+|+...+..++++++++|+++.+|.......++...+..++++
T Consensus 199 ~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~ 277 (337)
T cd08261 199 A-RELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELT 277 (337)
T ss_pred H-HHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCE
Confidence 5 78899999987764 33444443 699999999876578899999999999999986654444555555667778
Q ss_pred EEEEecCCHHHHHHHHHHHHcCCCcc--ce-EEeecccHHHHHHHHHcCC-CceeEEEEe
Q 027664 157 VGGSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKAD-VRYRFVIDV 212 (220)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~i~~g~i~~--~~-~~~~~~~~~~a~~~~~~~~-~~gk~vv~~ 212 (220)
+.+......+.++.+++++++|.+.+ .+ ..+++++++++++.+.+++ ..+|+|+++
T Consensus 278 ~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 278 ILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred EEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 87776555667889999999999987 45 7999999999999999874 668999864
No 59
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.93 E-value=1.9e-24 Score=171.30 Aligned_cols=208 Identities=23% Similarity=0.248 Sum_probs=170.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++...++++|+++++++++++++.+.|||. +.....++++++++|+|+ |++|++++++|+..|++|+++++++++.+
T Consensus 103 ~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~ 181 (324)
T cd08244 103 VADVDSLHPVPDGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA 181 (324)
T ss_pred EEchHHeEeCCCCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4677899999999999999999999999964 444556899999999996 99999999999999999999998888776
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +.+|++.+++..+.+ .+.+..+ ++|+++||+|+. ....++++++++|+++.+|..... ..++....+.++
T Consensus 182 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 259 (324)
T cd08244 182 LV-RALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRG 259 (324)
T ss_pred HH-HHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCC
Confidence 66 789998888876543 3333333 799999999987 578899999999999999876532 344545567788
Q ss_pred eEEEEEecCC------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 155 KIVGGSLIGG------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~~~~~~~~~------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.++.+..... .+.++.+++++.++.+.+.+ +.|+++++++|++.+.+++..+|+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 260 VTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8888776533 24577788999999987666 8999999999999999988889999864
No 60
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.93 E-value=3e-24 Score=171.54 Aligned_cols=207 Identities=19% Similarity=0.228 Sum_probs=163.2
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++ ++..+.+||+++ ...++++|++|+|+|+|++|.+++|+|+.+|++ +++++.++++.
T Consensus 123 ~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~- 199 (341)
T cd08262 123 LLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERR- 199 (341)
T ss_pred EechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-
Confidence 56778999999999999876 677888999986 455689999999998899999999999999996 55555555554
Q ss_pred HHHHHcCCCEEEcCCCHHH------HHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhc
Q 027664 81 EAVERLGADSFLVSRDQDE------MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~------~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 152 (220)
.+.+.+|+++++++.+.+. +.... +++|++|||+|+...+..++++++++|+++.+|.........+.....
T Consensus 200 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 279 (341)
T cd08262 200 ALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIR 279 (341)
T ss_pred HHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhh
Confidence 4557899988888765321 22222 269999999998546788999999999999998764333333333355
Q ss_pred CCeEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 153 GRKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
++.++.+......+.++.+++++++|.+.+. + +.|++++++++++.+.+++..+|+|++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 280 KELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred cceEEEEEecccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 7778877766666788999999999999853 3 789999999999999998888999874
No 61
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.93 E-value=1.4e-24 Score=172.93 Aligned_cols=206 Identities=23% Similarity=0.322 Sum_probs=170.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+++.+.++|+++... .++++++++|+|+ |.+|++++++++..|+++++++.++++++
T Consensus 123 ~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~ 201 (334)
T PRK13771 123 KVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAK 201 (334)
T ss_pred ecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 467788999999999999999999999999999877 6899999999998 99999999999999999999999888776
Q ss_pred HHHHHcCCCEEEcCCC-HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCC--CCCchhhhcCCeEE
Q 027664 81 EAVERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL--ELPAFPLLTGRKIV 157 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~ 157 (220)
.+ +.+ ++++++..+ .+.+++. +++|+++||+|+. ....++++++++|+++.+|...... .......+.++.++
T Consensus 202 ~~-~~~-~~~~~~~~~~~~~v~~~-~~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 277 (334)
T PRK13771 202 IV-SKY-ADYVIVGSKFSEEVKKI-GGADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEI 277 (334)
T ss_pred HH-HHH-HHHhcCchhHHHHHHhc-CCCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEE
Confidence 66 566 666666542 1233333 4799999999986 5889999999999999998754322 23333446678888
Q ss_pred EEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 158 GGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.+......++++.+++++++|.+++.+ +.|+++++++|++.+.++...+|+++.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 278 IGHISATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred EEecCCCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 887766778899999999999998666 7999999999999999888789999865
No 62
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.93 E-value=1.7e-24 Score=172.93 Aligned_cols=209 Identities=20% Similarity=0.276 Sum_probs=170.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc----
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---- 76 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~---- 76 (220)
.++.+.++++|+++++++++++++.+.|||+++.....+++|++|||+|+ |++|++++|+|++.|+++++++.++
T Consensus 106 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 185 (341)
T cd08290 106 VVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLE 185 (341)
T ss_pred eccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcch
Confidence 46778999999999999999999999999999987777899999999987 9999999999999999999888876
Q ss_pred cchHHHHHHcCCCEEEcCCCH---H---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCch
Q 027664 77 SKKSEAVERLGADSFLVSRDQ---D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAF 148 (220)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~~~---~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 148 (220)
++++.+ +.+|+++++++.+. + .+....+ ++|++|||+|+. .....+++++++|+++.+|.... ...++..
T Consensus 186 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 263 (341)
T cd08290 186 ELKERL-KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTS 263 (341)
T ss_pred hHHHHH-HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHH
Confidence 345555 67999999887653 2 2333333 699999999987 57788999999999999986443 2445555
Q ss_pred hhhcCCeEEEEEecCCH----------HHHHHHHHHHHcCCCccce-EEe---ecccHHHHHHHHHcCCCceeEEEEe
Q 027664 149 PLLTGRKIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVI---PADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 149 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~g~i~~~~-~~~---~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
..+.++.++.+...... ..++.+++++.+|.+.+.+ ..+ ++++++++++.+.++...+|+|+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 264 LLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 56788889888765322 2477788999999998765 677 9999999999999888889999864
No 63
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.93 E-value=2.8e-24 Score=173.17 Aligned_cols=206 Identities=22% Similarity=0.372 Sum_probs=167.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++.+++.+.+||+++.....+++|++|||+|+|++|++++++|+++|++ +++++.++++.+
T Consensus 143 ~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~ 222 (365)
T cd05279 143 VVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFE 222 (365)
T ss_pred EecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 4677899999999999999999999999999987777789999999998899999999999999995 666666776666
Q ss_pred HHHHHcCCCEEEcCCCH--H---HHHHhc-CCccEEEEcCCCcccHHHHHhccc-cCCEEEEeCCCC--CCCCCCchhhh
Q 027664 81 EAVERLGADSFLVSRDQ--D---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLLGAPE--KPLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~--~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~ 151 (220)
.+ +++|++.+++..+. + .+.+.. +++|++||++|....+..++++++ ++|+++.+|... ....++...+
T Consensus 223 ~~-~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~- 300 (365)
T cd05279 223 KA-KQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL- 300 (365)
T ss_pred HH-HHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-
Confidence 55 78999988887654 2 233333 389999999987557889999999 999999998754 3456666666
Q ss_pred cCCeEEEEEecC---CHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 152 TGRKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
.++.++.|.+.. ..+.+..++++++++.+++. + ++|+++++++|++.+++++. .|+++
T Consensus 301 ~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 301 LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence 677788877543 34678889999999998864 3 88999999999999887665 46665
No 64
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.93 E-value=2.3e-24 Score=170.74 Aligned_cols=208 Identities=19% Similarity=0.238 Sum_probs=172.1
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+++.+.+||+++.....+.+|++|+|+|+ |.+|++++++|+++|+++++++.++++++
T Consensus 98 ~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 177 (323)
T cd05282 98 VAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE 177 (323)
T ss_pred ecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHH
Confidence 45677899999999999999999999999999888877899999999997 89999999999999999999999988877
Q ss_pred HHHHHcCCCEEEcCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +++|++.++++.+.+. +.+.++ ++|++|||+|+. .....+++++++|+++.+|..... ..++...+..++
T Consensus 178 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 255 (323)
T cd05282 178 EL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKD 255 (323)
T ss_pred HH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcC
Confidence 66 7899999998776433 334443 799999999987 467889999999999999876542 445555555588
Q ss_pred eEEEEEecCCH----------HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 KIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~~~~~~~~~~----------~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.+...... +.++.+++++.+|.+.+.+ +.|+++++++|++.+..++..+|+|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 256 ITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred ceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 88888765432 3477788999999988765 899999999999999988877898863
No 65
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.93 E-value=4.1e-24 Score=170.97 Aligned_cols=208 Identities=19% Similarity=0.267 Sum_probs=167.6
Q ss_pred cccc--ceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCC-CeEEEEeCCccch
Q 027664 3 ADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (220)
Q Consensus 3 v~~~--~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g-~~vi~~~~~~~~~ 79 (220)
++++ .++++|+++++++++.+++.+++||.++.....+.++++++|.|+|++|.+++|+|+..| .++++++.++++.
T Consensus 125 v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~ 204 (345)
T cd08286 125 IPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRL 204 (345)
T ss_pred cccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 3444 899999999999999999999999987666666899999999989999999999999999 6888877766554
Q ss_pred HHHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCC
Q 027664 80 SEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGR 154 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (220)
. +.+++|++.++++.+.+ .+.+... ++|++|||+|....++.++++++++|+++.+|.......+++..++.++
T Consensus 205 ~-~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 283 (345)
T cd08286 205 E-VAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKN 283 (345)
T ss_pred H-HHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcC
Confidence 4 55789999998876533 3344433 7999999998765788899999999999999876544566666667889
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCC--ceeEEEEe
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADV--RYRFVIDV 212 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~--~gk~vv~~ 212 (220)
.++.+.... ...++.++++++++.+.+. + ++|++++++++++.+..... ..|+++++
T Consensus 284 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 284 ITITTGLVD-TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred cEEEeecCc-hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 898876542 3567888999999998753 3 78999999999999987643 36998864
No 66
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.93 E-value=3.2e-24 Score=170.63 Aligned_cols=213 Identities=22% Similarity=0.292 Sum_probs=173.9
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.+||+++.....+++|++++|+|+ |.+|++++++|++.|+++++++.++++++
T Consensus 100 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 179 (334)
T PTZ00354 100 VAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD 179 (334)
T ss_pred EecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999988777899999999996 99999999999999999888888887777
Q ss_pred HHHHHcCCCEEEcCCCHH----HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CC-CCchhhhc
Q 027664 81 EAVERLGADSFLVSRDQD----EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LE-LPAFPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~----~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~ 152 (220)
.+ +.+|++.++++.+.+ .+.+..+ ++|++|||+|+. .+..++++++++|+++.+|...+. .. ++...++.
T Consensus 180 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~ 257 (334)
T PTZ00354 180 FC-KKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLR 257 (334)
T ss_pred HH-HHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHh
Confidence 66 679998888876533 2334442 799999999876 688999999999999999865432 22 66666667
Q ss_pred CCeEEEEEecCCH----------HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 027664 153 GRKIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVANTM 216 (220)
Q Consensus 153 ~~~~~~~~~~~~~----------~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~ 216 (220)
+..++.++..... +.++.+++++.++.+.+.+ +.+++++++++++.+..++..+|+|+.+.+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~~ 332 (334)
T PTZ00354 258 KRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEPL 332 (334)
T ss_pred hCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence 7778777654331 2246778889999988766 88999999999999998887899999987654
No 67
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.93 E-value=5.7e-24 Score=169.75 Aligned_cols=206 Identities=21% Similarity=0.264 Sum_probs=166.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
+++++.++++|+++++++|+. ...+.++|+++.....+ ++++|||.|+|.+|++++|+|+++|+ ++++++.++++.+
T Consensus 127 ~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~ 204 (339)
T cd08232 127 VVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLA 204 (339)
T ss_pred EechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 567789999999999999875 67888999999887765 89999998889999999999999999 8888888776665
Q ss_pred HHHHHcCCCEEEcCCCHHHHHHhc---CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEE
Q 027664 81 EAVERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIV 157 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~---~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (220)
+++++|++.++++.+.+ +.+.. +++|+++||+|....++..+++++++|+++.+|........+...++.++.++
T Consensus 205 -~~~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 282 (339)
T cd08232 205 -VARAMGADETVNLARDP-LAAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDL 282 (339)
T ss_pred -HHHHcCCCEEEcCCchh-hhhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEE
Confidence 55788999998876544 32322 26999999999755688999999999999999865533444444556678888
Q ss_pred EEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 158 GGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 158 ~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.+.... .+.++.+++++++|.+++. + ++|+++++++|++.+.+++..||+|+++
T Consensus 283 ~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 283 RGSFRF-DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred EEEecC-HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 877643 4568889999999988643 4 7899999999999999888789999864
No 68
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=4.7e-24 Score=167.74 Aligned_cols=203 Identities=23% Similarity=0.326 Sum_probs=167.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.|||+++...... +|++++|+|+ |++|.++++++++.|++|+.+++++++.+
T Consensus 93 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 171 (305)
T cd08270 93 AVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAE 171 (305)
T ss_pred EEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 467789999999999999999999999999999888754 6999999998 99999999999999999999998887776
Q ss_pred HHHHHcCCCEEEcCCCHHHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhc--CCeE
Q 027664 81 EAVERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLT--GRKI 156 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~ 156 (220)
.+ +++|++..++..+ +.. +++|+++||+|+. ....++++++.+|+++.+|..... ..++...+.. ++.+
T Consensus 172 ~~-~~~g~~~~~~~~~-----~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 244 (305)
T cd08270 172 GL-RELGAAEVVVGGS-----ELSGAPVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRR 244 (305)
T ss_pred HH-HHcCCcEEEeccc-----cccCCCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccce
Confidence 66 5699876654322 112 3799999999987 688999999999999999875432 3344444444 5788
Q ss_pred EEEEecCC----HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 157 VGGSLIGG----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 157 ~~~~~~~~----~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
+.++.... ...++.+++++.++++.+.+ ++++++++++|++.+.+++..||+|+.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 245 LYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred EEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 88877653 35678889999999998766 7999999999999999888889999864
No 69
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.93 E-value=4e-25 Score=188.63 Aligned_cols=213 Identities=20% Similarity=0.244 Sum_probs=176.3
Q ss_pred CcccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEc-cchhHHHHHHHHHHCCCeEEEEeCCccch
Q 027664 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (220)
Q Consensus 1 ~~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G-~g~~G~~~~~la~~~g~~vi~~~~~~~~~ 79 (220)
+.++.+.++.+|++.++++|++.|+.|.|+|+|+...+..++|+++||++ +|++|++++.+|.++|++|+.++.+.+++
T Consensus 1511 ~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKR 1590 (2376)
T KOG1202|consen 1511 VLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKR 1590 (2376)
T ss_pred hhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHH
Confidence 35677889999999999999999999999999999999999999999996 59999999999999999999999999999
Q ss_pred HHHHHHcC---CCEEEcCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhh
Q 027664 80 SEAVERLG---ADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPL 150 (220)
Q Consensus 80 ~~~~~~~g---~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~ 150 (220)
+.+++.++ .+.+-|.++. .-+.+-++ |+|+|+++..+. .++..++||+.+||+..+|-..- .-+...+.+
T Consensus 1591 efL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMav 1669 (2376)
T KOG1202|consen 1591 EFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAV 1669 (2376)
T ss_pred HHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhh
Confidence 99988776 3555555553 33444443 899999999987 59999999999999999986542 222334456
Q ss_pred hcCCeEEEEEecC-----CHHHHHHHHHHHHcC----CCccce-EEeecccHHHHHHHHHcCCCceeEEEEeCC
Q 027664 151 LTGRKIVGGSLIG-----GLKETQEMIDFAAKH----NIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVAN 214 (220)
Q Consensus 151 ~~~~~~~~~~~~~-----~~~~~~~~~~~i~~g----~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 214 (220)
+.+|.+++|.... ..+++.++..++++| .++|.. ++|+-+++++||++|.+++.+||+|+++-.
T Consensus 1670 fLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~ 1743 (2376)
T KOG1202|consen 1670 FLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRA 1743 (2376)
T ss_pred hhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcc
Confidence 8899999997653 346677777776655 566666 899999999999999999999999998843
No 70
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.93 E-value=6.5e-24 Score=172.15 Aligned_cols=207 Identities=18% Similarity=0.182 Sum_probs=166.8
Q ss_pred cccc--ceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccch
Q 027664 3 ADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (220)
Q Consensus 3 v~~~--~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~ 79 (220)
++++ .++++|+++++++|++++..+.|||+++ ....+++|++|+|+|+|++|++++++|++.|+ ++++++.++++.
T Consensus 144 v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~ 222 (386)
T cd08283 144 VPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERL 222 (386)
T ss_pred cccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 4445 7899999999999999999999999999 55668999999999989999999999999998 699998888776
Q ss_pred HHHHHHcCCCEEEcCCCHH----HHHHhcC--CccEEEEcCCCc---------------------ccHHHHHhccccCCE
Q 027664 80 SEAVERLGADSFLVSRDQD----EMQAAMG--TMDGIIDTVSAV---------------------HPLMPLIGLLKSQGK 132 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~~----~~~~~~~--~~d~v~d~~g~~---------------------~~~~~~~~~l~~~G~ 132 (220)
+.+ ++++...++++.+.+ .+.++.+ ++|++|||+|+. ..+..++++++++|+
T Consensus 223 ~~~-~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 301 (386)
T cd08283 223 EMA-RSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGT 301 (386)
T ss_pred HHH-HHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCE
Confidence 665 556333566665432 2344443 799999999753 246788999999999
Q ss_pred EEEeCCCCCC-CCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCC-Ccee
Q 027664 133 LVLLGAPEKP-LELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKAD-VRYR 207 (220)
Q Consensus 133 ~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~-~~gk 207 (220)
++.+|..... ..++...++.++.++.+......+.++.+++++.++++.+. + +.|+++++++|++.+.++. ..+|
T Consensus 302 iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 381 (386)
T cd08283 302 VSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIK 381 (386)
T ss_pred EEEEcCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEE
Confidence 9999876542 34455456788889888876666788999999999999864 4 7899999999999998876 4589
Q ss_pred EEEE
Q 027664 208 FVID 211 (220)
Q Consensus 208 ~vv~ 211 (220)
++++
T Consensus 382 ~~~~ 385 (386)
T cd08283 382 VVLK 385 (386)
T ss_pred EEec
Confidence 9985
No 71
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.93 E-value=5.2e-24 Score=169.37 Aligned_cols=207 Identities=45% Similarity=0.744 Sum_probs=173.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++++.++++|+++++++++.+++.+.+||+++.. ..+.++++++|+|+|.+|++++++|+..|++|+++++++++.+.
T Consensus 123 ~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~ 201 (330)
T cd08245 123 VADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKREL 201 (330)
T ss_pred EEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46778899999999999999999999999999877 45799999999998889999999999999999999999888776
Q ss_pred HHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCCeEEEEE
Q 027664 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGRKIVGGS 160 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~ 160 (220)
+ +++|++.+++..+.+......+++|+++||++.......++++++.+|+++.++..... ..+....++.++.++.++
T Consensus 202 ~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (330)
T cd08245 202 A-RKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGS 280 (330)
T ss_pred H-HHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEe
Confidence 6 67898888876554433333347999999988766788999999999999999865433 233345577788889888
Q ss_pred ecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEE
Q 027664 161 LIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 161 ~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
.......++.+++++.++.+.+.++.|++++++++++.+.++...+|+|+
T Consensus 281 ~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 281 THGGRADLQEALDFAAEGKVKPMIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred ccCCHHHHHHHHHHHHcCCCcceEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 87777889999999999999875689999999999999998888888874
No 72
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.93 E-value=1e-23 Score=167.16 Aligned_cols=208 Identities=22% Similarity=0.240 Sum_probs=166.1
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcC--CCCCC-EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL--DKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~--~~~~~-~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~ 77 (220)
.++++.++++|+++++++++.+++.+.+++.++..... +.+++ +|+|+|+ |++|.+++++|+++|+++++++.+++
T Consensus 102 ~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~ 181 (323)
T TIGR02823 102 RVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAE 181 (323)
T ss_pred EEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 46778999999999999999999999999988755433 67888 9999997 99999999999999999998888887
Q ss_pred chHHHHHHcCCCEEEcCCCHH-HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcCC
Q 027664 78 KKSEAVERLGADSFLVSRDQD-EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGR 154 (220)
Q Consensus 78 ~~~~~~~~~g~~~~~~~~~~~-~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (220)
+++.+ +++|++.+++..+.+ .++.... ++|+++||+|+. .+..++++++++|+++.+|.... ..+.+...++.++
T Consensus 182 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 259 (323)
T TIGR02823 182 EEDYL-KELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRG 259 (323)
T ss_pred HHHHH-HhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcc
Confidence 77655 789998888776543 2333433 699999999987 68899999999999999997643 2333435555788
Q ss_pred eEEEEEecCC------HHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 KIVGGSLIGG------LKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~~~~~~~~~------~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.+..... ...++.+.+++.++.+.+..+.|+++++++|++.+.+++..+|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 260 VSLLGIDSVYCPMALREAAWQRLATDLKPRNLESITREITLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred eEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCceeeecHHHHHHHHHHHhCCCccceEEEe
Confidence 8888865321 12355666777788876545899999999999999998888999875
No 73
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.93 E-value=9.5e-24 Score=168.77 Aligned_cols=205 Identities=23% Similarity=0.264 Sum_probs=164.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
+++++.++++|+++++++++.+ ..+.+|++++ ....+++|++++|.|+|++|.+++|+|+++|++ |+++++++++..
T Consensus 124 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~ 201 (343)
T cd05285 124 NHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLE 201 (343)
T ss_pred EecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4677889999999999999876 5778898887 455689999999998899999999999999997 888887776665
Q ss_pred HHHHHcCCCEEEcCCCHH------HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhc
Q 027664 81 EAVERLGADSFLVSRDQD------EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~------~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 152 (220)
.+ +++|++.++++.+.+ .+.+..+ ++|++|||+|....++..+++++++|+++.+|.......++...+..
T Consensus 202 ~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 280 (343)
T cd05285 202 FA-KELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASL 280 (343)
T ss_pred HH-HHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhh
Confidence 55 678999998876533 3444443 69999999998656889999999999999998654434444455667
Q ss_pred CCeEEEEEecCCHHHHHHHHHHHHcCCCcc--ce-EEeecccHHHHHHHHHcCC-CceeEEE
Q 027664 153 GRKIVGGSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKAD-VRYRFVI 210 (220)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~--~~-~~~~~~~~~~a~~~~~~~~-~~gk~vv 210 (220)
+++.+.++.... +.++.++++++++.+.+ .+ ++|+++++.+|++.+.+++ ..+|+++
T Consensus 281 ~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 281 REIDIRGVFRYA-NTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred CCcEEEEeccCh-HHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 788888776443 67888999999998753 34 7899999999999998875 3489988
No 74
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.92 E-value=6.4e-24 Score=169.93 Aligned_cols=209 Identities=20% Similarity=0.265 Sum_probs=165.9
Q ss_pred ccccc--ceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccc
Q 027664 2 VADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK 78 (220)
Q Consensus 2 ~v~~~--~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~ 78 (220)
+++++ .++++|+++++++++++++.+.|||+++ ....++++++|||.|+|.+|++++|+|+.+|+ +++++..++++
T Consensus 126 ~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~ 204 (347)
T cd05278 126 RVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPER 204 (347)
T ss_pred EecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 34555 8999999999999999999999999998 45568999999998889999999999999997 88888776655
Q ss_pred hHHHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCC-Cchhhhc
Q 027664 79 KSEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLEL-PAFPLLT 152 (220)
Q Consensus 79 ~~~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~ 152 (220)
.+ .++.+|++.++++.+.+ .+++..+ ++|++|||+|....+...+++++++|+++.+|........ .....+.
T Consensus 205 ~~-~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 283 (347)
T cd05278 205 LD-LAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFG 283 (347)
T ss_pred HH-HHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhh
Confidence 44 55788999998877643 3444433 7999999999854788999999999999999865443211 2222346
Q ss_pred CCeEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCC-ceeEEEEe
Q 027664 153 GRKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADV-RYRFVIDV 212 (220)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~-~gk~vv~~ 212 (220)
++.++.+......+.++.+++++.+|.+.+. + ..|+++++++|++.+..++. .+|+++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 284 KNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred ceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 7778777665556788999999999999863 3 78999999999999988776 68988763
No 75
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.92 E-value=6.9e-24 Score=167.95 Aligned_cols=200 Identities=19% Similarity=0.228 Sum_probs=160.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++++.++++|+++++++++.+ ....+++.++. ...++++++|+|+|+|.+|++++|+|+.+|++|++++.++++++.
T Consensus 117 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~~-~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~ 194 (319)
T cd08242 117 TLPLENLHVVPDLVPDEQAVFA-EPLAAALEILE-QVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLAL 194 (319)
T ss_pred EechHHeEECcCCCCHHHhhhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4677889999999999888753 44456666654 455799999999998999999999999999999999888877766
Q ss_pred HHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEe
Q 027664 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSL 161 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 161 (220)
+ +++|++.++++.+. .-.+++|++|||+|+...+..+.++++++|+++..+.......++...+..++.++.+..
T Consensus 195 ~-~~~g~~~~~~~~~~----~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~ 269 (319)
T cd08242 195 A-RRLGVETVLPDEAE----SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSR 269 (319)
T ss_pred H-HHcCCcEEeCcccc----ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEe
Confidence 6 56999888776432 111379999999998657888999999999999877655555666666778888888876
Q ss_pred cCCHHHHHHHHHHHHcCCCc--cce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 162 IGGLKETQEMIDFAAKHNIR--ADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 162 ~~~~~~~~~~~~~i~~g~i~--~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
... ++.+++++++|+++ +.+ +.|+++++++|++.+.++. .+|+|+++
T Consensus 270 ~~~---~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 270 CGP---FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred ccc---HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 543 77888999999995 335 8999999999999998776 48998863
No 76
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.92 E-value=5.7e-24 Score=169.53 Aligned_cols=206 Identities=17% Similarity=0.253 Sum_probs=162.1
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCC-----CCEEEEEcc-chhHHHHHHHHHHC-CCeEEEEeC
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVIST 74 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~G~-g~~G~~~~~la~~~-g~~vi~~~~ 74 (220)
.++++.++++|+++++++++++++.+.|||+++....++++ |++|||+|+ |++|++++|+|++. |++|++++.
T Consensus 103 ~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~ 182 (336)
T TIGR02817 103 LVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATAS 182 (336)
T ss_pred EEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcC
Confidence 56778899999999999999999999999999977766776 999999996 99999999999998 999999999
Q ss_pred CccchHHHHHHcCCCEEEcCCC--HHHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhh
Q 027664 75 SPSKKSEAVERLGADSFLVSRD--QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (220)
++++.+.+ +++|+++++++.. ...+++..+ ++|+++|++++.......+++++++|+++.++.. ..++...+.
T Consensus 183 ~~~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~ 258 (336)
T TIGR02817 183 RPESQEWV-LELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFK 258 (336)
T ss_pred cHHHHHHH-HHcCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhh
Confidence 88877666 7899999987544 233444433 7999999987655788999999999999988532 233444444
Q ss_pred cCCeEEEEEecC-----C-------HHHHHHHHHHHHcCCCccce-EEe---ecccHHHHHHHHHcCCCceeEEEE
Q 027664 152 TGRKIVGGSLIG-----G-------LKETQEMIDFAAKHNIRADI-EVI---PADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~~~~~~~~-----~-------~~~~~~~~~~i~~g~i~~~~-~~~---~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.++.+.... . ...++.+++++.+|.+++.+ +.+ +++++++|++.+.+++..||+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 259 RKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred hcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 455555542221 0 13468889999999988765 455 468999999999998888998874
No 77
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.92 E-value=8.8e-24 Score=167.06 Aligned_cols=207 Identities=22% Similarity=0.253 Sum_probs=166.7
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.+++..++++|+++++++++++++.+.+||+++.....+++|++|+|+|+ |++|++++|+|++.|++|+.++.++++++
T Consensus 102 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 181 (320)
T cd08243 102 LVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA 181 (320)
T ss_pred EcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999988877899999999997 99999999999999999999999987776
Q ss_pred HHHHHcCCCEEEcCCC--HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCC---CCchhh--hcC
Q 027664 81 EAVERLGADSFLVSRD--QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLE---LPAFPL--LTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~ 153 (220)
.+ +.+|++++++... .+.+.+..+++|+++||+|+. .+..++++++++|+++.+|....... ...... +.+
T Consensus 182 ~~-~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~ 259 (320)
T cd08243 182 LL-KELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGV 259 (320)
T ss_pred HH-HhcCCcEEEecCccHHHHHHHhCCCceEEEECCChH-HHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhcc
Confidence 66 7799988875432 223444434899999999986 68899999999999999987543211 122222 256
Q ss_pred CeEEEEEecCC--HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 154 RKIVGGSLIGG--LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
+.++.+..... ...++.+++++.++.+++.+ +.|+++++++|++.+.+++..+|+|+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 260 NLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred ceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 67777665433 24578888999999988655 78999999999999998887788875
No 78
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.92 E-value=1.9e-23 Score=167.53 Aligned_cols=204 Identities=18% Similarity=0.209 Sum_probs=161.2
Q ss_pred cccc-ceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 3 ADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 3 v~~~-~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
++++ .++++|+++++++++.+ ..+.++|+++ ....+++|++|+|.|+|.+|++++++|+++|++ ++++++++++.
T Consensus 136 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~- 212 (350)
T cd08256 136 FPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERL- 212 (350)
T ss_pred cccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHH-
Confidence 4555 57899999999999988 8889999998 445689999999977799999999999999995 55666666555
Q ss_pred HHHHHcCCCEEEcCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhh-hcCC
Q 027664 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPL-LTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~ 154 (220)
.+.+++|++.++++.+. +.+.+.++ ++|++|||+|....+..++++++++|+++.+|......+++...+ ..++
T Consensus 213 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 292 (350)
T cd08256 213 ALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKE 292 (350)
T ss_pred HHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccc
Confidence 55578999988887653 34445443 699999999965468889999999999999987654444443333 3567
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
+++.++.... ..+.++++++++|.+++. + +.|+++++++|++.+++++..+|+++
T Consensus 293 ~~i~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 293 LDVLGSHLGP-YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred cEEEEeccCc-hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 7787776543 468889999999999873 4 89999999999999998887788874
No 79
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.92 E-value=1.1e-23 Score=168.31 Aligned_cols=200 Identities=21% Similarity=0.305 Sum_probs=165.5
Q ss_pred eEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchHHHHHHc
Q 027664 8 VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVERL 86 (220)
Q Consensus 8 ~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~~~~~~~ 86 (220)
++++|+++++.+++.+ ..+.+||+++... .+++|++|+|+|+|.+|.+++|+|+..|++ +++++.++++.+.+ +.+
T Consensus 133 ~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~ 209 (343)
T cd08235 133 VLKLPDNVSFEEAALV-EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKL 209 (343)
T ss_pred EEECCCCCCHHHHHhh-hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh
Confidence 9999999999999865 7889999999766 689999999998899999999999999998 88888887777666 678
Q ss_pred CCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC--CCCCchhhhcCCeEEEE
Q 027664 87 GADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAFPLLTGRKIVGG 159 (220)
Q Consensus 87 g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~ 159 (220)
|.++++++.+.+ .+.+..+ ++|++|||++....+...+++++++|+++.+|..... ..++......++..+.+
T Consensus 210 g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~ 289 (343)
T cd08235 210 GADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITG 289 (343)
T ss_pred CCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEE
Confidence 999988877643 3444443 6999999999765688899999999999999865432 34444556678888888
Q ss_pred EecCCHHHHHHHHHHHHcCCCcc--ce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 160 SLIGGLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 160 ~~~~~~~~~~~~~~~i~~g~i~~--~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
........++.++++++++.+.+ .+ ..|++++++++++.+.+++ .+|+|+.
T Consensus 290 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 290 SYAASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred EecCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 87777778899999999999874 24 7899999999999999988 8999863
No 80
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.92 E-value=1.2e-23 Score=166.78 Aligned_cols=209 Identities=22% Similarity=0.246 Sum_probs=163.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCC--C-CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD--K-PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~--~-~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~ 77 (220)
.++++.++++|+++++++++++++.+.++|+++...... . .+++|+|+|+ |++|++++++|+..|++|++++.+++
T Consensus 103 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (325)
T cd05280 103 RVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE 182 (325)
T ss_pred EEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 467889999999999999999999999999998765432 4 3579999997 99999999999999999999999988
Q ss_pred chHHHHHHcCCCEEEcCCCHH--HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcC
Q 027664 78 KKSEAVERLGADSFLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (220)
Q Consensus 78 ~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (220)
+++.+ +.+|++++++..+.. ..+... +++|++|||+|.. .+..++++++++|+++.+|.... +..++...++.+
T Consensus 183 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 260 (325)
T cd05280 183 QADYL-KSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILR 260 (325)
T ss_pred HHHHH-HhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheee
Confidence 77766 679999988866532 222233 3799999999986 68999999999999999987543 234455555578
Q ss_pred CeEEEEEecCC--H----HHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 154 RKIVGGSLIGG--L----KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 154 ~~~~~~~~~~~--~----~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
+.++.+..... . ..++.+.+++.++...+...+|++++++++++.+.+++..||+|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 261 GVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eeEEEEEEeecCchhHHHHHHHHHHHHHhcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 88888765432 1 22344555556664433338999999999999999998889999863
No 81
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.92 E-value=1.9e-23 Score=167.04 Aligned_cols=202 Identities=19% Similarity=0.268 Sum_probs=164.0
Q ss_pred cceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHH
Q 027664 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (220)
Q Consensus 6 ~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~ 84 (220)
..++++|+++++++++++++.+.|||+++.. ..+.++++|+|+|+|++|++++++|+.+|+ ++++++.++++... .+
T Consensus 132 ~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~-~~ 209 (344)
T cd08284 132 GTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLER-AA 209 (344)
T ss_pred CceEECCCCCCHHHhhhhcCchHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHH-HH
Confidence 4999999999999999999999999999976 457899999999889999999999999997 88888666665544 46
Q ss_pred HcCCCEEEcCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcCCeEEE
Q 027664 85 RLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGRKIVG 158 (220)
Q Consensus 85 ~~g~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~ 158 (220)
++|+. .++.... ..+.+..+ ++|++|||+|....+...+++++++|+++.+|.... .........+.++.++.
T Consensus 210 ~~g~~-~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (344)
T cd08284 210 ALGAE-PINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLR 288 (344)
T ss_pred HhCCe-EEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEE
Confidence 78875 3555442 33444443 799999999976578899999999999999997653 23445556677888887
Q ss_pred EEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 159 GSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+......+.++.+++++.++.+.+. + ++|++++++++++.+.+++. +|+|+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 289 FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred EecCCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 6655556788999999999998852 4 78999999999999988777 999875
No 82
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.92 E-value=1.4e-23 Score=166.84 Aligned_cols=201 Identities=29% Similarity=0.384 Sum_probs=166.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++.+++.+++.+.|||+++ ...+++++++++|+|+|++|+++++++++.|++|++++.++++++.
T Consensus 128 ~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~ 206 (329)
T cd08298 128 VADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQEL 206 (329)
T ss_pred EecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHH
Confidence 467788999999999999999999999999999 5666899999999999999999999999999999999999877766
Q ss_pred HHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCCeEEEEE
Q 027664 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGRKIVGGS 160 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~ 160 (220)
+ +.+|++.+++.... ..+++|+++++.+....+...+++++++|+++.+|..... ..++.. .+.++..+.++
T Consensus 207 ~-~~~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~ 279 (329)
T cd08298 207 A-RELGADWAGDSDDL-----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSV 279 (329)
T ss_pred H-HHhCCcEEeccCcc-----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEe
Confidence 6 78999887766432 1237999999977666789999999999999998854322 122222 24567778777
Q ss_pred ecCCHHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEE
Q 027664 161 LIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 161 ~~~~~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
.......++.++++++++.+++.++.|+++++++|++.+++++..||+|+
T Consensus 280 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 280 ANLTRQDGEEFLKLAAEIPIKPEVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred cCCCHHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 77777788999999999998875689999999999999999888888874
No 83
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.92 E-value=1.7e-23 Score=168.56 Aligned_cols=207 Identities=23% Similarity=0.360 Sum_probs=169.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++.+++.+.+||.++.....+.++++++|+|+|++|++++++|+..|++ |++++.++++.+
T Consensus 142 ~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~ 221 (363)
T cd08279 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLE 221 (363)
T ss_pred EeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 4677899999999999999999999999999987777789999999998899999999999999995 888888887766
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchhhhcC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (220)
.+ +.+|++++++....+ .+.+.. +++|+++||+++...+...+++++++|+++.+|.... ...++...+..+
T Consensus 222 ~~-~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 300 (363)
T cd08279 222 LA-RRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLS 300 (363)
T ss_pred HH-HHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhc
Confidence 55 789999988876533 344444 3799999999976578899999999999999986542 355666666667
Q ss_pred CeEEEEEec---CCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEE
Q 027664 154 RKIVGGSLI---GGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFV 209 (220)
Q Consensus 154 ~~~~~~~~~---~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~v 209 (220)
+..+.+++. ...+.++++++++.++.+.+. + ++|+++++++|++.+.+++..+.++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 301 EKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred CcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 777777654 235778899999999999863 4 7899999999999998887654443
No 84
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.92 E-value=8e-24 Score=167.95 Aligned_cols=209 Identities=20% Similarity=0.273 Sum_probs=160.2
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcC---CCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~ 77 (220)
.++++.++++|+++++++++.+++.+.||+.++..... ...+++|+|+|+ |++|++++|+|+++|++|++++++++
T Consensus 103 ~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (326)
T cd08289 103 RVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKAD 182 (326)
T ss_pred EEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHH
Confidence 46778999999999999999999999999988764322 345789999998 99999999999999999999999988
Q ss_pred chHHHHHHcCCCEEEcCCCH--HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcC
Q 027664 78 KKSEAVERLGADSFLVSRDQ--DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (220)
Q Consensus 78 ~~~~~~~~~g~~~~~~~~~~--~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (220)
+++.+ +++|++.+++..+. +.+.+..+ ++|++|||+|+. .+...+++++++|+++.+|.... ..+++...++.+
T Consensus 183 ~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~ 260 (326)
T cd08289 183 AADYL-KKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILR 260 (326)
T ss_pred HHHHH-HHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhc
Confidence 87766 77999888887653 23333433 799999999985 68999999999999999997643 234445566688
Q ss_pred CeEEEEEecCC--HHHHHHHHHHHHc----CCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 154 RKIVGGSLIGG--LKETQEMIDFAAK----HNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~i~~----g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
+.++.+..... .......+..+.. +.+...+ ++|+++++++|++.+.+++..+|+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 261 GVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 88888874321 1222223332221 2222334 8999999999999999998889999863
No 85
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.92 E-value=2.2e-23 Score=168.27 Aligned_cols=207 Identities=22% Similarity=0.354 Sum_probs=163.2
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
+++++.++++|+++++++++++++.+.++|+++.....+++|++|+|+|+|++|++++++|++.|+ +|+++++++++++
T Consensus 150 ~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~ 229 (373)
T cd08299 150 VVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFA 229 (373)
T ss_pred EecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 568889999999999999999999999999987666668999999999989999999999999999 8999998888777
Q ss_pred HHHHHcCCCEEEcCCCH-----HHHHHhc-CCccEEEEcCCCcccHHHHHhcc-ccCCEEEEeCCCCCC--CCCCchhhh
Q 027664 81 EAVERLGADSFLVSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~-----~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +.+|++++++..+. +.+.+.+ +++|+++||+|.+..+..++..+ +.+|+++.+|..... .++.... +
T Consensus 230 ~a-~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~-~ 307 (373)
T cd08299 230 KA-KELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPML-L 307 (373)
T ss_pred HH-HHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHH-H
Confidence 66 78999999887542 2233443 37999999999765677766655 579999999976532 3333332 3
Q ss_pred cCCeEEEEEecCC---HHHHHHHHHHHHcCCCcc--ce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 152 TGRKIVGGSLIGG---LKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~~~~~~~~~---~~~~~~~~~~i~~g~i~~--~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.++.+++... ..++.++++.+.++.+++ .+ ++|+++++++|++.+++++. .|+++.
T Consensus 308 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~ 372 (373)
T cd08299 308 LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLT 372 (373)
T ss_pred hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEe
Confidence 4667888876643 256777777777776553 34 89999999999999887764 577775
No 86
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.92 E-value=3.8e-23 Score=164.54 Aligned_cols=208 Identities=30% Similarity=0.387 Sum_probs=176.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++.+++.+++.+.+||+++.....+++|++++|+|+|++|+++++++++.|++|++++.++++++.
T Consensus 120 ~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~ 199 (336)
T cd08276 120 VLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLER 199 (336)
T ss_pred EecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 35678899999999999999999999999999988777899999999988999999999999999999999988877776
Q ss_pred HHHHcCCCEEEcCCC-H---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 82 AVERLGADSFLVSRD-Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~-~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
+ +.+|.+.+++... . +.+.+..+ ++|+++|+++.. ....++++++++|+++.+|..... ........+.++
T Consensus 200 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 277 (336)
T cd08276 200 A-KALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKG 277 (336)
T ss_pred H-HHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcc
Confidence 6 4589888887654 2 23445543 799999999866 688999999999999999875543 345566778899
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.+........++.+++++.++.+.+.. +.+++++++++++.+.+++..+|++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 278 ATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred eEEEEEecCcHHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 999998877777889999999999887655 899999999999999988878899875
No 87
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.92 E-value=1.4e-23 Score=166.75 Aligned_cols=208 Identities=25% Similarity=0.264 Sum_probs=166.5
Q ss_pred cccc-cceEeCCCCCC--cccccc-ccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc
Q 027664 2 VADE-HFVVRIPEGAP--LDATAP-LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (220)
Q Consensus 2 ~v~~-~~~~~ip~~~s--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~ 76 (220)
.++. +.++++|++++ +.++++ +++.+.|||+++.....+.++++|+|+|+ |++|++++|+|+..|++|+++++++
T Consensus 101 ~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~ 180 (329)
T cd05288 101 VVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSD 180 (329)
T ss_pred EecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 4567 88999999995 545555 89999999999987777889999999996 9999999999999999999999888
Q ss_pred cchHHHHHHcCCCEEEcCCCHHH---HHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCC------CC
Q 027664 77 SKKSEAVERLGADSFLVSRDQDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLE------LP 146 (220)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~~~~~---~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~ 146 (220)
++.+.+.+.+|++.++++.+.+. +.+.. +++|++|||+|.. .+..++++++++|+++.+|....... ++
T Consensus 181 ~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 259 (329)
T cd05288 181 EKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKN 259 (329)
T ss_pred HHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccCccccccccccc
Confidence 77776644489988888776432 33333 3799999999986 68899999999999999986543211 23
Q ss_pred chhhhcCCeEEEEEecCCH-----HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 147 AFPLLTGRKIVGGSLIGGL-----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
....+.++.++.+...... +.+.++++++.+|.+++.. ..+++++++++++.+.+++..+|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 260 LGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 4455678888888765432 4577888999999998765 77899999999999998887788874
No 88
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.92 E-value=4.8e-23 Score=166.54 Aligned_cols=202 Identities=21% Similarity=0.192 Sum_probs=161.2
Q ss_pred ceEeCCCCCCcc---ccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHH
Q 027664 7 FVVRIPEGAPLD---ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (220)
Q Consensus 7 ~~~~ip~~~s~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~ 82 (220)
.++++|++++++ ++++++..+.|+|+++ ....+++|++|+|.|+|++|++++|+|++.|+ +|++++.++++.+.+
T Consensus 139 ~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~ 217 (375)
T cd08282 139 NLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLA 217 (375)
T ss_pred cEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 899999999998 5678888999999998 45568999999999889999999999999998 788877777665544
Q ss_pred HHHcCCCEEEcCCCHH---HHHHhcC-CccEEEEcCCCcc-----------cHHHHHhccccCCEEEEeCCCCC------
Q 027664 83 VERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLLGAPEK------ 141 (220)
Q Consensus 83 ~~~~g~~~~~~~~~~~---~~~~~~~-~~d~v~d~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~------ 141 (220)
+++|++ .+++.+.+ .+.+.++ ++|+++||+|... .+..++++++++|+++.+|....
T Consensus 218 -~~~g~~-~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~ 295 (375)
T cd08282 218 -ESIGAI-PIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAG 295 (375)
T ss_pred -HHcCCe-EeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccc
Confidence 689984 45665433 3344443 7999999999762 37889999999999998876431
Q ss_pred -------CCCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 142 -------PLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 142 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
...++...++.++..+.+......+.++.+++++.++.+++. + ++|+++++++|++.+.+++ .+|+|++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 296 DAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred cccccCccccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 123455556777777777766556778889999999999873 5 8999999999999999888 8999875
Q ss_pred e
Q 027664 212 V 212 (220)
Q Consensus 212 ~ 212 (220)
+
T Consensus 375 ~ 375 (375)
T cd08282 375 P 375 (375)
T ss_pred C
Confidence 3
No 89
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.92 E-value=3.3e-23 Score=165.62 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=164.1
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++++ ..+.+||+++. ...++++++|+|+|+|.+|.+++|+|+.+|++ ++++++++++.+
T Consensus 121 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~ 198 (343)
T cd08236 121 SVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLA 198 (343)
T ss_pred EechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 4678899999999999999877 67789999987 44578999999998899999999999999996 988888877666
Q ss_pred HHHHHcCCCEEEcCCCHH--HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCC---CchhhhcC
Q 027664 81 EAVERLGADSFLVSRDQD--EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLEL---PAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~--~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~ 153 (220)
.+ +.+|++.++++.+.. .+.+..+ ++|++|||+|....+..++++++++|+++.+|...+...+ +...++.+
T Consensus 199 ~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 277 (343)
T cd08236 199 VA-RELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRK 277 (343)
T ss_pred HH-HHcCCCEEecCccccHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhc
Confidence 55 778998888876543 3333433 5999999998765688999999999999999866543222 23344577
Q ss_pred CeEEEEEecCC-----HHHHHHHHHHHHcCCCc--cce-EEeecccHHHHHHHHHc-CCCceeEEE
Q 027664 154 RKIVGGSLIGG-----LKETQEMIDFAAKHNIR--ADI-EVIPADYVNTAMERLAK-ADVRYRFVI 210 (220)
Q Consensus 154 ~~~~~~~~~~~-----~~~~~~~~~~i~~g~i~--~~~-~~~~~~~~~~a~~~~~~-~~~~gk~vv 210 (220)
+.++.++.... .+.++.++++++++.+. +.+ ..+++++++++++.+.+ +...+|+|+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 278 ELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred CcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 88888876543 46688899999999986 334 78999999999999998 556678764
No 90
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.91 E-value=6.6e-23 Score=162.96 Aligned_cols=206 Identities=25% Similarity=0.346 Sum_probs=168.6
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++...++++|+++++++++++++.+.+||+++.. ..+.++++++|+|+ |++|++++++++..|++|+.+++++++.+
T Consensus 123 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~ 201 (332)
T cd08259 123 KVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK 201 (332)
T ss_pred EechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 46778899999999999999999999999999987 66899999999997 99999999999999999999998877666
Q ss_pred HHHHHcCCCEEEcCCC-HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCC-CCCchhhhcCCeEEE
Q 027664 81 EAVERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTGRKIVG 158 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~ 158 (220)
.+ +.++.+.+++..+ .+.+.+.. ++|++++|+|.. ....++++++++|+++.+|...... .+.......++.++.
T Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~~~~-~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 278 (332)
T cd08259 202 IL-KELGADYVIDGSKFSEDVKKLG-GADVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRII 278 (332)
T ss_pred HH-HHcCCcEEEecHHHHHHHHhcc-CCCEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEE
Confidence 55 6788887776543 12222222 799999999987 4888999999999999998765432 223333445677777
Q ss_pred EEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 159 GSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
+.......+++.+++++.+|.+.+.+ +.|+++++++|++.+.+++..+|++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 279 GSISATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred EecCCCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 77666678899999999999988766 799999999999999988888998864
No 91
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.91 E-value=3.9e-23 Score=164.15 Aligned_cols=207 Identities=21% Similarity=0.257 Sum_probs=162.6
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.++|.++.....+++|++++|+|+ |.+|++++++++.+|++++.++.+++++.
T Consensus 100 ~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~ 179 (327)
T PRK10754 100 NVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ 179 (327)
T ss_pred EcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999887777899999999985 99999999999999999999998888776
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +.+|++.+++..+.+ .+.+.++ ++|++|||+|+. .....+++++++|+++.+|..... ..++...+..++
T Consensus 180 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 257 (327)
T PRK10754 180 RA-KKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKG 257 (327)
T ss_pred HH-HHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccC
Confidence 66 779998888776533 3444444 799999999986 688899999999999999876432 223332222222
Q ss_pred e------EEEEEecCCH----HHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 K------IVGGSLIGGL----KETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~------~~~~~~~~~~----~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
. .+.+.. .+. ..++.+++++.+|.+.+. + +.|++++++++++.++++...+|+|+.
T Consensus 258 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 258 SLYVTRPSLQGYI-TTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ceEEecceeeccc-CCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 1 122221 122 234568899999999854 3 899999999999999998888999985
No 92
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.91 E-value=1.2e-22 Score=162.51 Aligned_cols=203 Identities=19% Similarity=0.274 Sum_probs=160.8
Q ss_pred cceEeCCCCCCccccc-----cccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccch
Q 027664 6 HFVVRIPEGAPLDATA-----PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (220)
Q Consensus 6 ~~~~~ip~~~s~~~aa-----~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~ 79 (220)
+.++++|++++++.+. ++...+.+|++++.. ..+++|++++|.|+|++|++++|+|++.|++ ++++++++++.
T Consensus 128 ~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~ 206 (345)
T cd08287 128 GTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQ 206 (345)
T ss_pred CceEECCCCCChhhhhhhhhHhhhcHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 3899999999882221 223678889988864 4578999999988899999999999999995 66666666554
Q ss_pred HHHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCC
Q 027664 80 SEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGR 154 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (220)
++.+.+|++.++++.+.+ .+.+..+ ++|+++||+|+...+..++++++++|+++.+|.......++....+.++
T Consensus 207 -~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 285 (345)
T cd08287 207 -ALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRN 285 (345)
T ss_pred -HHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcc
Confidence 455789999999887643 3444443 7999999998766789999999999999999876544455554567889
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.+......+.++++++++.+|.+.+. + +.++++++++|++.+..+.. .|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 286 VGLAGGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred eEEEEecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence 99988766666789999999999999863 3 78999999999999887665 499885
No 93
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.91 E-value=6.5e-23 Score=162.74 Aligned_cols=198 Identities=24% Similarity=0.320 Sum_probs=162.9
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++++++.+.+||+++.. ..+++|++++|+|+ |++|++++++|+++|++|+++++ .+
T Consensus 123 ~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~ 197 (325)
T cd08264 123 VVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KD 197 (325)
T ss_pred EcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HH
Confidence 46778899999999999999999999999999876 56899999999997 99999999999999999888763 23
Q ss_pred HHHHHcCCCEEEcCCCH-HHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC-CCCCCCchhhhcCCeEEE
Q 027664 81 EAVERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLLTGRKIVG 158 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~ 158 (220)
.+ +.+|++++++..+. +.+++..+++|+++||+|.. .+..++++++++|+++.+|... ....++...+..++.++.
T Consensus 198 ~~-~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (325)
T cd08264 198 WL-KEFGADEVVDYDEVEEKVKEITKMADVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISII 275 (325)
T ss_pred HH-HHhCCCeeecchHHHHHHHHHhCCCCEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEE
Confidence 44 67899888876542 33444447899999999985 7899999999999999998742 235566667777888899
Q ss_pred EEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeE
Q 027664 159 GSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRF 208 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~ 208 (220)
+...+..+.++.+++++.+.+ ..+ +.|+++++++|++.+.++...+|+
T Consensus 276 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 276 GSTGGTRKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred EccCCCHHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 988777888999999986444 334 889999999999999887766665
No 94
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.91 E-value=3.2e-22 Score=161.22 Aligned_cols=206 Identities=20% Similarity=0.259 Sum_probs=158.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++.+.++++|++++++++++. ....++++++ ....+.++++++|+|+|++|++++|+|++.|++ +++++.++++.+
T Consensus 143 ~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 220 (364)
T PLN02702 143 VHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLS 220 (364)
T ss_pred EcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4677889999999999988752 2344577777 444578999999999899999999999999995 666666655544
Q ss_pred HHHHHcCCCEEEcCCC--H---HHHHHh---c-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhh
Q 027664 81 EAVERLGADSFLVSRD--Q---DEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~--~---~~~~~~---~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (220)
+++.+|++.++++.. . +.+.++ . +++|++|||+|+...+..++++++++|+++.+|.......+....+.
T Consensus 221 -~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 299 (364)
T PLN02702 221 -VAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAA 299 (364)
T ss_pred -HHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHH
Confidence 557899988776431 1 223333 2 37999999999755789999999999999999865444444566678
Q ss_pred cCCeEEEEEecCCHHHHHHHHHHHHcCCCcc--ce-EEeec--ccHHHHHHHHHcCCCceeEEEE
Q 027664 152 TGRKIVGGSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPA--DYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~--~~-~~~~~--~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.+++++.+++.. ...++.++++++++.+.+ .+ ++|++ +++++|++.+.+++..+|+++.
T Consensus 300 ~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 300 AREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred hCccEEEEeccC-hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 888999887754 457888999999999863 34 77665 7999999999888777999985
No 95
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.91 E-value=2.3e-22 Score=163.01 Aligned_cols=206 Identities=20% Similarity=0.263 Sum_probs=161.2
Q ss_pred cccccceEeCCCCC-------CccccccccchhhhhhhHHHhh-cCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEE
Q 027664 2 VADEHFVVRIPEGA-------PLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVI 72 (220)
Q Consensus 2 ~v~~~~~~~ip~~~-------s~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~ 72 (220)
.++++.++++|+++ +++ +++++..+.+||+++... ..+++|++|+|+|+|++|++++|+|+..|+ +|+++
T Consensus 156 ~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~ 234 (384)
T cd08265 156 AVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAF 234 (384)
T ss_pred EechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 46778899999863 444 566778889999998655 568999999999889999999999999999 78888
Q ss_pred eCCccchHHHHHHcCCCEEEcCCCH------HHHHHhcC--CccEEEEcCCCc-ccHHHHHhccccCCEEEEeCCCCCCC
Q 027664 73 STSPSKKSEAVERLGADSFLVSRDQ------DEMQAAMG--TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPEKPL 143 (220)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~--~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~ 143 (220)
+.++++ .++++++|++.++++.+. +.+.+.++ ++|+++||+|.. ..+..++++++++|+++.+|......
T Consensus 235 ~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 313 (384)
T cd08265 235 EISEER-RNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTV 313 (384)
T ss_pred cCCHHH-HHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCC
Confidence 888775 455578999998887632 23444443 799999999963 35788899999999999998755444
Q ss_pred CCCchhhhcCCeEEEEEecC-CHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 144 ELPAFPLLTGRKIVGGSLIG-GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
.+....+..+..++.+.... ....++++++++++|.+.+. + +.|+++++++|++.+.++ ..+|+|+
T Consensus 314 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 314 PLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred cccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 44555566677788877642 23468889999999999864 4 789999999999997655 4688875
No 96
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.91 E-value=1.8e-22 Score=161.21 Aligned_cols=208 Identities=22% Similarity=0.212 Sum_probs=158.6
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCC----------CCCCEEEEEcc-chhHHHHHHHHHHCCCeEE
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVT 70 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~----------~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi 70 (220)
.++.+.++++|+++++++++++++.+.|||+++.....+ .++++++|+|+ |++|++++++|++.|++|+
T Consensus 104 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~ 183 (339)
T cd08249 104 VADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVI 183 (339)
T ss_pred EechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEE
Confidence 467788999999999999999999999999998766444 68999999997 9999999999999999998
Q ss_pred EEeCCccchHHHHHHcCCCEEEcCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhcccc--CCEEEEeCCCCCCCC
Q 027664 71 VISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKS--QGKLVLLGAPEKPLE 144 (220)
Q Consensus 71 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~ 144 (220)
.++ ++++++.+ +.+|+++++++.+.+ .+++..+ ++|++||++|.+..+..+++++++ +|+++.+|.......
T Consensus 184 ~~~-~~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~ 261 (339)
T cd08249 184 TTA-SPKNFDLV-KSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETE 261 (339)
T ss_pred EEE-CcccHHHH-HhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCcccc
Confidence 887 45666655 789999998876643 3444433 799999999985578999999999 999999987643221
Q ss_pred CCchhhhcCCeEEEEEe-------cCCHHHHHHHHHHHHcCCCccce-EEee--cccHHHHHHHHHcCC-CceeEEEEe
Q 027664 145 LPAFPLLTGRKIVGGSL-------IGGLKETQEMIDFAAKHNIRADI-EVIP--ADYVNTAMERLAKAD-VRYRFVIDV 212 (220)
Q Consensus 145 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~g~i~~~~-~~~~--~~~~~~a~~~~~~~~-~~gk~vv~~ 212 (220)
+. .............. ......++.++++++++.+.+.. ..++ ++++++|++.+.+++ ..+|+|+++
T Consensus 262 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 262 PR-KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred CC-CCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 11 11111111111110 01124577788999999998765 6777 999999999999888 789999864
No 97
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.90 E-value=2.8e-22 Score=159.69 Aligned_cols=209 Identities=22% Similarity=0.281 Sum_probs=173.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.++++++.....+.++++++|+|+ +.+|++++++++..|++++.+++++++.+
T Consensus 126 ~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~ 205 (342)
T cd08266 126 AVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE 205 (342)
T ss_pred EechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999877777889999999997 79999999999999999999998887776
Q ss_pred HHHHHcCCCEEEcCCCHHH---HHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~---~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +.++.+.+++..+.+. +.+.. +++|++++++|.. .+...+++++++|+++.+|..... ...+....+.++
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~ 283 (342)
T cd08266 206 RA-KELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQ 283 (342)
T ss_pred HH-HHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcc
Confidence 65 5678777777665433 33332 2799999999986 588899999999999999876542 334444557788
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.++.+........+..++++++++.+.+.+ +.|+++++++|++.+..+...+|+++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 284 LSILGSTMGTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred eEEEEEecCCHHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 899998887778899999999999988766 8999999999999999887779999863
No 98
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.90 E-value=2.7e-22 Score=160.28 Aligned_cols=207 Identities=17% Similarity=0.205 Sum_probs=159.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+ ..+.+++++... . ..+|++|+|.|+|++|.+++|+|++.|+ +|++++.++++.
T Consensus 126 ~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~-~-~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~- 201 (341)
T PRK05396 126 VIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS-F-DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRL- 201 (341)
T ss_pred EechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc-C-CCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-
Confidence 4677889999999999888744 455555555433 2 3689999998889999999999999999 677776666555
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCe
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRK 155 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (220)
.+++++|++.++++.+.+ .+.++.+ ++|++|||.|....++.++++++++|+++.+|......+++...+..++.
T Consensus 202 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 281 (341)
T PRK05396 202 ELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGL 281 (341)
T ss_pred HHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcce
Confidence 445789999998876543 3444443 79999999997667889999999999999998765544555566777888
Q ss_pred EEEEEecCC-HHHHHHHHHHHHcC-CCccce-EEeecccHHHHHHHHHcCCCceeEEEEeC
Q 027664 156 IVGGSLIGG-LKETQEMIDFAAKH-NIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 156 ~~~~~~~~~-~~~~~~~~~~i~~g-~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 213 (220)
++.++.... ...+..+++++.++ ++.+.+ +.++++++++|++.+.++. .||++++++
T Consensus 282 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 282 TIKGIYGREMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred EEEEEEccCccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 888765322 24456788888888 444445 8999999999999998877 799999764
No 99
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.90 E-value=3.6e-22 Score=157.43 Aligned_cols=209 Identities=25% Similarity=0.331 Sum_probs=168.2
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|++++++++++++..+.++++++.....+.+|++|+|+|+ |++|++++++++.+|++|++++.++++.+
T Consensus 96 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 175 (320)
T cd05286 96 VVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE 175 (320)
T ss_pred EecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 46678899999999999999999999999999887777899999999996 99999999999999999999998888777
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +.+|++.+++..+.+ .+....+ ++|+++||+|+. ....++++++++|+++.+|..... ..++...+..++
T Consensus 176 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 253 (320)
T cd05286 176 LA-RAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGS 253 (320)
T ss_pred HH-HHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcC
Confidence 66 679998888766533 3444443 799999999986 688999999999999999875433 234444444677
Q ss_pred eEEEEEec----CCH----HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 155 KIVGGSLI----GGL----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~~~~~~~----~~~----~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.++.+... ... +.+..+++++.++.+.+.+ +.|++++++++++.+..+...+|+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 254 LFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 77765432 112 2345678888899888666 7899999999999999888888998753
No 100
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.90 E-value=4e-22 Score=158.89 Aligned_cols=207 Identities=19% Similarity=0.259 Sum_probs=165.1
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCC-----CCEEEEEcc-chhHHHHHHHHHHCC-CeEEEEeC
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVIST 74 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~G~-g~~G~~~~~la~~~g-~~vi~~~~ 74 (220)
.++.+.++++|+++++++++.+++.+.++|+++.....+.+ |++|+|+|+ |++|++++++|+..| ++|++++.
T Consensus 104 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~ 183 (336)
T cd08252 104 LVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATAS 183 (336)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcC
Confidence 46778899999999999999999999999999876666776 999999996 999999999999999 89999999
Q ss_pred CccchHHHHHHcCCCEEEcCCCH--HHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhh
Q 027664 75 SPSKKSEAVERLGADSFLVSRDQ--DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (220)
++++.+.+ +.+|++.+++..+. +.+.... +++|++|||+|....+..++++++++|+++.+|... ..++...+.
T Consensus 184 ~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~ 260 (336)
T cd08252 184 RPESIAWV-KELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLK 260 (336)
T ss_pred ChhhHHHH-HhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--Ccccchhhh
Confidence 88777666 67999888887641 2233333 379999999997557889999999999999998653 334444444
Q ss_pred cCCeEEEEEecCC------------HHHHHHHHHHHHcCCCccce----EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 152 TGRKIVGGSLIGG------------LKETQEMIDFAAKHNIRADI----EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~~~~~~~~~------------~~~~~~~~~~i~~g~i~~~~----~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.++.+..... ...++.+++++.+|.+.+.. ..++++++++|++.+.++...+|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 261 SKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 6677776644321 13477888999999988653 357999999999999988888898863
No 101
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.90 E-value=3.3e-22 Score=157.67 Aligned_cols=204 Identities=21% Similarity=0.289 Sum_probs=161.1
Q ss_pred cccccceEeCCCCCCcccccccc-chhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccch
Q 027664 2 VADEHFVVRIPEGAPLDATAPLL-CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~-~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~ 79 (220)
.++++.++++|+++ .. ++++ ..+.++++++. ...++++++++|+|+|.+|.+++++|++.|++ ++++.++++++
T Consensus 92 ~v~~~~~~~lP~~~--~~-~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~ 167 (312)
T cd08269 92 LADADHAVPLPSLL--DG-QAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARL 167 (312)
T ss_pred EEchhheEECCCch--hh-hHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence 46788999999998 23 3344 77788998887 55689999999998899999999999999998 98888887666
Q ss_pred HHHHHHcCCCEEEcCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcC
Q 027664 80 SEAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (220)
+ +.+.+|++.+++.... +.+.+... ++|+++||+|........+++++++|+++.+|.... ...+++..+..+
T Consensus 168 ~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~ 246 (312)
T cd08269 168 A-LARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWK 246 (312)
T ss_pred H-HHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhc
Confidence 5 5578999888876543 33444443 799999999876568889999999999999986542 244555566778
Q ss_pred CeEEEEEecCC----HHHHHHHHHHHHcCCCcc--ce-EEeecccHHHHHHHHHcCCC-ceeEEE
Q 027664 154 RKIVGGSLIGG----LKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADV-RYRFVI 210 (220)
Q Consensus 154 ~~~~~~~~~~~----~~~~~~~~~~i~~g~i~~--~~-~~~~~~~~~~a~~~~~~~~~-~gk~vv 210 (220)
+..+.++.... .+.++.++++++++.+.+ .+ +.|++++++++++.+.+++. ++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 247 GIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred CCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 88877765433 257888999999999886 24 78999999999999998865 588876
No 102
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.90 E-value=5.6e-22 Score=157.26 Aligned_cols=209 Identities=22% Similarity=0.234 Sum_probs=164.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHH---hhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~---~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~ 77 (220)
.++.+.++++|++++++++++++..+++++.++. .....+++++++|+|+ |++|++++|+|+++|++|++++.+++
T Consensus 103 ~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~ 182 (324)
T cd08288 103 RVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPE 182 (324)
T ss_pred EEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4677889999999999999999999999987764 3443236789999997 99999999999999999999998888
Q ss_pred chHHHHHHcCCCEEEcCCCHH-HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcCC
Q 027664 78 KKSEAVERLGADSFLVSRDQD-EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGR 154 (220)
Q Consensus 78 ~~~~~~~~~g~~~~~~~~~~~-~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (220)
+++.+ +++|+++++++.+.. .+..... ++|.++|++++. .+..++..++.+|+++.+|.... ...++...++.++
T Consensus 183 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~ 260 (324)
T cd08288 183 EADYL-RSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRG 260 (324)
T ss_pred HHHHH-HhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccc
Confidence 77666 789999999876533 2333433 689999999975 57788888999999999987532 2334444555788
Q ss_pred eEEEEEecCC------HHHHHHHHHHHHcCCCccceEEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 155 KIVGGSLIGG------LKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~~~~~~~~~------~~~~~~~~~~i~~g~i~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.++.+..... .+.++.+.+++.++.+.+..+.++++++++|++.+.+++..+|+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 261 VTLLGIDSVMAPIERRRAAWARLARDLDPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cEEEEEEeecccchhhHHHHHHHHHHHhcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 8888864321 234666777888888876458999999999999999998889999863
No 103
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.90 E-value=4.9e-22 Score=158.77 Aligned_cols=206 Identities=18% Similarity=0.251 Sum_probs=159.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~ 80 (220)
+++.+.++++|++++++.+ +++..+.++++++. ...++|++|+|.|+|.+|++++|+|+..|+ +|++++.++++.
T Consensus 126 ~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~- 201 (341)
T cd05281 126 VVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRL- 201 (341)
T ss_pred EechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-
Confidence 5677889999999998544 57777788887765 235789999998889999999999999999 788886666555
Q ss_pred HHHHHcCCCEEEcCCCHH--HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCch-hhhcCCe
Q 027664 81 EAVERLGADSFLVSRDQD--EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF-PLLTGRK 155 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~--~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~ 155 (220)
.+.+++|++++++....+ .+.+..+ ++|++|||+|.......++++++++|+++.+|.......++.. .+..++.
T Consensus 202 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 281 (341)
T cd05281 202 ELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGL 281 (341)
T ss_pred HHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccce
Confidence 454689998888765432 3444443 7999999998766688999999999999999865543333322 3566777
Q ss_pred EEEEEecCC-HHHHHHHHHHHHcCCCcc--ce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 156 IVGGSLIGG-LKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 156 ~~~~~~~~~-~~~~~~~~~~i~~g~i~~--~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.+.+..... .+.+..+++++.+|.+.+ .+ +.++++++++|++.+.+++ .||+|+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 282 TVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred EEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 777765322 356778899999999864 34 7899999999999999988 89999863
No 104
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.90 E-value=6.5e-22 Score=158.02 Aligned_cols=206 Identities=16% Similarity=0.179 Sum_probs=158.7
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++++.++++|++++++++ +++..+.++++++ .....+|++++|.|+|++|.+++|+++.+|++ |+++..++++.
T Consensus 124 ~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~- 199 (340)
T TIGR00692 124 VVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRL- 199 (340)
T ss_pred EeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-
Confidence 4567889999999998654 5778888888876 23367899999988899999999999999996 87775555444
Q ss_pred HHHHHcCCCEEEcCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCch-hhhcCC
Q 027664 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF-PLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~---~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~ 154 (220)
.+.+.+|++.++++.+. +.+.+..+ ++|++|||+|+...+...+++++++|+++.+|.......++.. .+..++
T Consensus 200 ~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 279 (340)
T TIGR00692 200 ELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKG 279 (340)
T ss_pred HHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcc
Confidence 45578999888877653 33444443 7999999998766788999999999999999876433333333 456677
Q ss_pred eEEEEEecC-CHHHHHHHHHHHHcCCCc--cce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 155 KIVGGSLIG-GLKETQEMIDFAAKHNIR--ADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~~~~~~~~-~~~~~~~~~~~i~~g~i~--~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.++.+.... ..+.+.++++++.+|.++ +.+ +.+++++++++++.+.+++. ||+|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 280 LTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred eEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 777776532 234578899999999987 334 89999999999999988774 9999864
No 105
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.90 E-value=1.4e-22 Score=151.60 Aligned_cols=192 Identities=19% Similarity=0.185 Sum_probs=162.2
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 100 (220)
++..+++|||..+.+....++|++|+|-|| |.+|+++.|+|+.+|++|+..+.++++...+.+++|.+..+||.++..+
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~ 212 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDL 212 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCH
Confidence 678899999999999988899999999987 9999999999999999999999999999999889999999999887333
Q ss_pred HHh-----cCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC---CCC---CCchhhhcCCeEEEEEecCCH----
Q 027664 101 QAA-----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK---PLE---LPAFPLLTGRKIVGGSLIGGL---- 165 (220)
Q Consensus 101 ~~~-----~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~---- 165 (220)
.+. .+|+|+.||-+|+. .++..+..|+..|+++.+|..+. +.+ -+...++.|++.+.|+...+.
T Consensus 213 ~~aL~r~~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~ 291 (343)
T KOG1196|consen 213 SAALKRCFPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKY 291 (343)
T ss_pred HHHHHHhCCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhh
Confidence 222 24999999999998 69999999999999999998753 111 122456888999999765432
Q ss_pred -HHHHHHHHHHHcCCCccceE-EeecccHHHHHHHHHcCCCceeEEEEeCC
Q 027664 166 -KETQEMIDFAAKHNIRADIE-VIPADYVNTAMERLAKADVRYRFVIDVAN 214 (220)
Q Consensus 166 -~~~~~~~~~i~~g~i~~~~~-~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 214 (220)
+.+..+.+++++|+|+..-+ .-.|+..++||.-|.+++..||-++++..
T Consensus 292 ~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 292 PKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred HHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence 44678889999999998753 34599999999999999999999998864
No 106
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.90 E-value=5e-22 Score=157.88 Aligned_cols=205 Identities=22% Similarity=0.283 Sum_probs=163.9
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|++ +.++++++..+.+||+++.....++++++++|+|+ |.+|++++++++..|++|+++++++++..
T Consensus 101 ~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 101 VVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred EechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 4677889999997 45778899999999999988777899999999996 99999999999999999999998887776
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-----------CCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-----------LEL 145 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~ 145 (220)
.+ +.+|++.+++..+.+ .+.... +++|++|||+|+. ....++++++++|+++.+|..... ..+
T Consensus 179 ~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 256 (329)
T cd08250 179 FL-KSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATL 256 (329)
T ss_pred HH-HHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEecccCCcccCcccccccccc
Confidence 66 679988888765532 233333 3799999999975 688999999999999999875431 111
Q ss_pred CchhhhcCCeEEEEEecCC-----HHHHHHHHHHHHcCCCccce---EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 146 PAFPLLTGRKIVGGSLIGG-----LKETQEMIDFAAKHNIRADI---EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~g~i~~~~---~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
....+.++.++.++.... .+.+..+++++.+|.+.+.+ +.++++++++|++.+.+++..+|++++
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 257 -PPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred -cHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 223467788888876542 24567888999999988742 569999999999999988877898863
No 107
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.90 E-value=7.7e-22 Score=157.13 Aligned_cols=204 Identities=21% Similarity=0.254 Sum_probs=162.6
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+ ..+.++++++ ....+++|++++|+|+|.+|.+++++|++.|++ +++++.++++.+
T Consensus 121 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 198 (334)
T cd08234 121 VVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLE 198 (334)
T ss_pred EecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4677889999999999998765 7778889888 455689999999998899999999999999997 888888877766
Q ss_pred HHHHHcCCCEEEcCCCHHHH--HHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchhhhcCCe
Q 027664 81 EAVERLGADSFLVSRDQDEM--QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGRK 155 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~--~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~ 155 (220)
.+ +++|++.++++.+.+.. +... +++|++|||+|.......++++++++|+++.+|.... ..++....+..++.
T Consensus 199 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 277 (334)
T cd08234 199 LA-KKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKEL 277 (334)
T ss_pred HH-HHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCc
Confidence 55 77898888877654321 2222 3799999999876578889999999999999987543 34455555555778
Q ss_pred EEEEEecCCHHHHHHHHHHHHcCCCccc--e-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 156 IVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~i~~g~i~~~--~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
++.+... ..+.++.+++++.++.+.+. + .+|++++++++++.+.+ ...+|+|+
T Consensus 278 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 278 TIIGSFI-NPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred EEEEecc-CHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 8877764 34668889999999998753 3 78999999999999998 66789886
No 108
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.89 E-value=7.9e-22 Score=155.92 Aligned_cols=209 Identities=25% Similarity=0.335 Sum_probs=167.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++++++.+.+||+++.....+.+|++++|+|+ |++|++++++++..|++|+++++++++.+
T Consensus 104 ~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 183 (325)
T cd08253 104 VVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAE 183 (325)
T ss_pred EecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999988677899999999996 99999999999999999999999887776
Q ss_pred HHHHHcCCCEEEcCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCe
Q 027664 81 EAVERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRK 155 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~---~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (220)
.+ +.+|++.+++....+. +.+... ++|+++||+|.. .....+++++++|+++.+|.......++...++.++.
T Consensus 184 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 261 (325)
T cd08253 184 LV-RQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEA 261 (325)
T ss_pred HH-HHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCc
Confidence 66 6789888887765432 333332 799999999987 5788889999999999998754333444445556777
Q ss_pred EEEEEecCC--H----HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 156 IVGGSLIGG--L----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 156 ~~~~~~~~~--~----~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
++.+...+. . +.++.+.+++.++.+.+.. +.|++++++++++.+.++...+|+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 262 SIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred eEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 776654332 1 2355566778888887665 7899999999999999888889998753
No 109
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.89 E-value=3.6e-22 Score=155.12 Aligned_cols=203 Identities=24% Similarity=0.328 Sum_probs=155.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe-EEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~-vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+ +.+.+||+++.. ..++++++++|+|+|++|++++++|+++|++ |+++++++++..
T Consensus 59 ~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~ 136 (277)
T cd08255 59 VVPANLLVPLPDGLPPERAALT-ALAATALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE 136 (277)
T ss_pred EcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH
Confidence 4677899999999999999988 789999999864 5589999999999899999999999999997 999988887776
Q ss_pred HHHHHcC-CCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEE
Q 027664 81 EAVERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGG 159 (220)
Q Consensus 81 ~~~~~~g-~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 159 (220)
.++++| .+.+++..+.. .-.+++|++|||++........+++++++|+++.+|............+..+..++.+
T Consensus 137 -~~~~~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd08255 137 -LAEALGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRS 212 (277)
T ss_pred -HHHHcCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEe
Confidence 557788 55555432211 0123799999999876678899999999999999987654311111233445556555
Q ss_pred EecCC------------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcC-CCceeEEE
Q 027664 160 SLIGG------------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKA-DVRYRFVI 210 (220)
Q Consensus 160 ~~~~~------------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~-~~~gk~vv 210 (220)
..... .+.++++++++.++.+.+.+ +.|+++++++|++.+.++ ....|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 213 SQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 54321 14578899999999988766 889999999999999877 33467653
No 110
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.89 E-value=1.4e-21 Score=154.22 Aligned_cols=207 Identities=29% Similarity=0.347 Sum_probs=167.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++++.++++|++++++++++++..+.++|+++.....+.++++++|+|+ |++|++++++++..|++++++++++++..
T Consensus 99 ~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~ 178 (323)
T cd05276 99 VVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE 178 (323)
T ss_pred EcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45778899999999999999999999999999887777899999999997 99999999999999999999998887776
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (220)
.+ +.+|++.+++....+ .+.+.. +++|++||++|+. .....+++++++|+++.+|.... ...++...++.++
T Consensus 179 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~ 256 (323)
T cd05276 179 AC-RALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKR 256 (323)
T ss_pred HH-HHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhC
Confidence 66 678888888776543 233333 2799999999987 47888999999999999987543 2344555556788
Q ss_pred eEEEEEecCCH----------HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 155 KIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 155 ~~~~~~~~~~~----------~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
.++.++..... ..+.++++++.++.+.+.. +.|++++++++++.+.++...+|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 257 LTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred CeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 88888765432 2246677888899887655 89999999999999998877788763
No 111
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.88 E-value=2.3e-21 Score=150.74 Aligned_cols=206 Identities=24% Similarity=0.349 Sum_probs=161.9
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.++|.++.....+.+|++|+|+|+ |.+|++++++++..|++|+++++++++..
T Consensus 64 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 143 (288)
T smart00829 64 RTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD 143 (288)
T ss_pred EccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778999999999999999999999999999866667899999999996 99999999999999999999998888777
Q ss_pred HHHHHcCC--CEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchhhh
Q 027664 81 EAVERLGA--DSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~--~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~ 151 (220)
.+ +++|+ +.++++.+.+ .+.+..+ ++|.++|++|+. .....+++++++|+++.+|.... ...++... +
T Consensus 144 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~ 220 (288)
T smart00829 144 FL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-F 220 (288)
T ss_pred HH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcEEEEEcCcCCccccccchhh-h
Confidence 66 67897 7777765543 2333333 799999999965 68889999999999999986532 22333333 4
Q ss_pred cCCeEEEEEecC----C----HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 152 TGRKIVGGSLIG----G----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~~~~~~~~----~----~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
.++.++.+.... . .+.+..+++++.++++.+.. +.|++++++++++.+..+...+|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 221 RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 455666554331 1 13466788889899887654 88999999999999998877678763
No 112
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.88 E-value=7.7e-21 Score=152.32 Aligned_cols=207 Identities=29% Similarity=0.335 Sum_probs=158.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCC----CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP----GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~ 76 (220)
.++++.++++|+++++++++.+++.+.++|+++.....+.+ |++++|+|+ |++|+++++++++.|++|+++.++
T Consensus 118 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~- 196 (350)
T cd08248 118 VVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST- 196 (350)
T ss_pred EecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-
Confidence 46778999999999999999999999999999887766654 999999996 999999999999999998888765
Q ss_pred cchHHHHHHcCCCEEEcCCCHHHHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC--C--CCC--c-
Q 027664 77 SKKSEAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--L--ELP--A- 147 (220)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~--~~~--~- 147 (220)
++ .++.+.+|.+.+++..+.+..+.+. +++|++|||+|.. ....++++++++|+++.+|..... . ... .
T Consensus 197 ~~-~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 274 (350)
T cd08248 197 DA-IPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGML 274 (350)
T ss_pred ch-HHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhh
Confidence 34 4455788998888876644444433 3799999999987 689999999999999999854311 0 110 0
Q ss_pred -h--hhhc-------CCeEE-EEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 148 -F--PLLT-------GRKIV-GGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 148 -~--~~~~-------~~~~~-~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
. .+.. +.... .+........+..+++++.+|.+.+.+ +.|++++++++++.+.+++..+|++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 275 KSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred hhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 0 0110 11111 112223456789999999999987666 899999999999999888777888763
No 113
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.88 E-value=5.6e-21 Score=151.27 Aligned_cols=205 Identities=26% Similarity=0.330 Sum_probs=163.8
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.+++..++++|+++++.++++++..+.+||+++.....+++|++++|+|+ |++|++++++++..|++|+.++++ ++.+
T Consensus 104 ~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~ 182 (326)
T cd08272 104 VVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAA 182 (326)
T ss_pred EecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHH
Confidence 45678899999999999999999999999999877777899999999996 999999999999999999998887 6666
Q ss_pred HHHHHcCCCEEEcCCCH--HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeE
Q 027664 81 EAVERLGADSFLVSRDQ--DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKI 156 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~--~~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
.+ +.+|.+.+++.... +.+.+... ++|.++||+|+. .....+++++++|+++.+|... .. .......++.+
T Consensus 183 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~~--~~~~~~~~~~~ 257 (326)
T cd08272 183 FA-RSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-TH--DLAPLSFRNAT 257 (326)
T ss_pred HH-HHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-cc--chhhHhhhcce
Confidence 55 77999888876543 22333333 699999999986 5888999999999999997653 22 22223356777
Q ss_pred EEEEecCC-----------HHHHHHHHHHHHcCCCccce--EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 157 VGGSLIGG-----------LKETQEMIDFAAKHNIRADI--EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 157 ~~~~~~~~-----------~~~~~~~~~~i~~g~i~~~~--~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
+.+..... ...+..+++++.++.+.+.+ +.|++++++++++.+.+++..+|+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 258 YSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred EEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 76665322 34577788899999887653 8899999999999998887778998863
No 114
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.88 E-value=7.9e-21 Score=150.29 Aligned_cols=209 Identities=30% Similarity=0.346 Sum_probs=168.1
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++...++++|+++++.++++++..+.++|+++.....++++++++|+|+ |++|.+++++++..|++|+++.+++++.+
T Consensus 99 ~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
T TIGR02824 99 AVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA 178 (325)
T ss_pred EecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999877777899999999996 99999999999999999999998887766
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (220)
.+ +.+|++.+++....+ .+..... ++|++++|+|.. ....++++++++|+++.+|.... ...++...++.++
T Consensus 179 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (325)
T TIGR02824 179 AC-EALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKR 256 (325)
T ss_pred HH-HHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcC
Confidence 55 778988887765543 2333333 699999999986 68889999999999999987542 2345555556889
Q ss_pred eEEEEEecCCH----------HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 155 KIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~~~~~~~~~~----------~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
.++.+...... ..+..+++++.++.+.+.+ +.|++++++++++.+.++...+|+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 257 LTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred CEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 89888764331 2245577888899887655 7899999999999999888788998753
No 115
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.88 E-value=4.2e-21 Score=150.54 Aligned_cols=205 Identities=20% Similarity=0.265 Sum_probs=160.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++++.++++|++++++++++++..+.+||+++. ...+++|++++|+|+ |.+|++++|++++.|+++++++.++++++
T Consensus 81 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 159 (303)
T cd08251 81 TVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLE 159 (303)
T ss_pred EccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 4677899999999999999999999999999986 456899999999976 99999999999999999999998887776
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC--CCCCCchhhhcC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (220)
.+ +.+|++.+++....+ .+.+..+ ++|.++|++++. .....+++++++|+++.+|.... ...+.... +.+
T Consensus 160 ~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~ 236 (303)
T cd08251 160 YL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSN 236 (303)
T ss_pred HH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccCcEEEEEeccCCCccCccChhH-hhc
Confidence 66 779998888876533 3444443 799999999875 68889999999999999876532 12233322 222
Q ss_pred CeEEEEEec-----CCH----HHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 154 RKIVGGSLI-----GGL----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 154 ~~~~~~~~~-----~~~----~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
+..+..... ... +.+.++++++.+|.+++.. +.|++++++++++.+.+++..+|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 237 NQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 333322221 111 3467788899999988665 88999999999999998888888874
No 116
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.88 E-value=6.6e-21 Score=150.55 Aligned_cols=208 Identities=29% Similarity=0.402 Sum_probs=167.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++++...+.+||+++.....+.++++++|+|+ |++|++++++++..|++|+.++.++++.+
T Consensus 99 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (323)
T cd08241 99 VVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA 178 (323)
T ss_pred EcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 35677899999999999999999999999999886667899999999997 99999999999999999999999887776
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCC-CCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLE-LPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~ 154 (220)
.+ +.+|++.+++....+ .+....+ ++|.++||+|.. ....++++++++|+++.+|....... +.....+.++
T Consensus 179 ~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 256 (323)
T cd08241 179 LA-RALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKN 256 (323)
T ss_pred HH-HHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcC
Confidence 66 678888887766533 3444433 799999999985 68889999999999999987543322 3343456678
Q ss_pred eEEEEEecCC---------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 KIVGGSLIGG---------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~~~~~~~~~---------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.+..... ...+..+++++.++.+.+.+ +.|++++++++++.+.++...+|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 257 ISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 8888765432 14567788999999887665 789999999999999888777888763
No 117
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.87 E-value=4.5e-21 Score=151.03 Aligned_cols=175 Identities=23% Similarity=0.271 Sum_probs=143.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeC-CccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~-~~~~~~ 80 (220)
.++++.++++|+++++++++ ++..+.++|+++.....++++++|+|.|+|.+|.+++|+|+..|++|+.+.. +.+.+.
T Consensus 125 ~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~ 203 (306)
T cd08258 125 LVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRL 203 (306)
T ss_pred EcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHH
Confidence 46778999999999999887 7778889999987777789999999988899999999999999999887743 333344
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (220)
.+.+.+|++.+ ++...+ .+.+..+ ++|++|||+|....+...+++++++|+++.+|.... ...++...++.++
T Consensus 204 ~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 282 (306)
T cd08258 204 DVAKELGADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKE 282 (306)
T ss_pred HHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcC
Confidence 55577898877 665433 3444433 799999999876578889999999999999998652 3566777788899
Q ss_pred eEEEEEecCCHHHHHHHHHHHHcC
Q 027664 155 KIVGGSLIGGLKETQEMIDFAAKH 178 (220)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~i~~g 178 (220)
+++.|++.++.++++.+++++++|
T Consensus 283 ~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 283 LSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred cEEEEEecCchHhHHHHHHHHhcC
Confidence 999999999999999999998875
No 118
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.87 E-value=1.1e-20 Score=147.13 Aligned_cols=206 Identities=21% Similarity=0.282 Sum_probs=161.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+++.+.+++.++.....+++|++++|+|+ |++|++++++++..|++++.++.++++..
T Consensus 68 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 147 (293)
T cd05195 68 RVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKRE 147 (293)
T ss_pred EechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999877777899999999985 99999999999999999999999887766
Q ss_pred HHHHHcC--CCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC--CCCCchhhh
Q 027664 81 EAVERLG--ADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g--~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +.++ ++.+++..+.+ .+.+... ++|.++||+|+. .++.++++++++|+++.+|..... ..+.... +
T Consensus 148 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~ 224 (293)
T cd05195 148 FL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-F 224 (293)
T ss_pred HH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccCceEEEeeccccccCCccchhh-h
Confidence 66 4566 67777765543 3444432 799999999988 789999999999999999865432 1222222 3
Q ss_pred cCCeEEEEEecCC---------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 152 TGRKIVGGSLIGG---------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~~~~~~~~~---------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
.++..+....... .+.+..+.+++.++++.+.. +.+++++++++++.+..++..+|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 225 LRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred ccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 3455555543211 13467788899999988765 78999999999999998887788763
No 119
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.87 E-value=1.3e-20 Score=148.89 Aligned_cols=206 Identities=28% Similarity=0.330 Sum_probs=153.9
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+++.+.+||+++.....+++|++++|+|+ |++|++++++|+..|++|++++.+ ++..
T Consensus 103 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~ 181 (319)
T cd08267 103 VAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAE 181 (319)
T ss_pred EechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHH
Confidence 35677899999999999999999999999999988887899999999997 999999999999999999988865 5554
Q ss_pred HHHHHcCCCEEEcCCCHHHHHHhc--CCccEEEEcCCCc-ccHHHHHhccccCCEEEEeCCCCCCCCCC-----chhhh-
Q 027664 81 EAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPEKPLELP-----AFPLL- 151 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~--~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~~~~- 151 (220)
.+ +.+|.+.+++....+...... +++|+++||+|+. .........++++|+++.+|......... .....
T Consensus 182 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~ 260 (319)
T cd08267 182 LV-RSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGG 260 (319)
T ss_pred HH-HHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccc
Confidence 44 789988888765433222222 2799999999953 12333444599999999998754321111 11111
Q ss_pred cCCeEEEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 152 TGRKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
.+........ ...+.+..+++++.++.+.+.+ +.|+++++++|++.+.+++..+|+++
T Consensus 261 ~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 261 GRRLKFFLAK-PNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred cceEEEEEec-CCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 1222222221 2367788999999999988766 89999999999999998777778763
No 120
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.87 E-value=1.9e-20 Score=148.89 Aligned_cols=205 Identities=23% Similarity=0.278 Sum_probs=155.9
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.+||+++.....+.+|++++|+|+ |++|++++++++..|++|+.++. +++..
T Consensus 99 ~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~ 177 (331)
T cd08273 99 NLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHA 177 (331)
T ss_pred EechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHH
Confidence 45678899999999999999999999999999988777899999999997 99999999999999999998887 55554
Q ss_pred HHHHHcCCCEEEcCCCHHHHH-Hhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCC--CC--c-------
Q 027664 81 EAVERLGADSFLVSRDQDEMQ-AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLE--LP--A------- 147 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~-~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~--~------- 147 (220)
.+ +.+|++. ++....+..+ ... +++|.++||+|+.. ...++++++.+|+++.+|....... .. +
T Consensus 178 ~~-~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T cd08273 178 AL-RELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLAR 254 (331)
T ss_pred HH-HHcCCeE-EcCCCcchhhhhccCCCceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhh
Confidence 44 6788654 4443322221 222 37999999999884 8899999999999999987643211 11 1
Q ss_pred -----hhhhcCCeEEEEEecC-------CHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 148 -----FPLLTGRKIVGGSLIG-------GLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 148 -----~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
...+.+..++.+.... ..+.++.+++++.+|.+.+.+ +.+++++++++++.+.++...||+|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 255 LAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred hhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 0112223333332221 125678889999999998766 89999999999999988887788875
No 121
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.87 E-value=1.1e-20 Score=148.48 Aligned_cols=202 Identities=26% Similarity=0.359 Sum_probs=160.4
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++...++++|+++++.+++.+++.+.++|+++.....+.++++++|+|+ |.+|++++++++..|+++++++.++ +..
T Consensus 104 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~ 182 (309)
T cd05289 104 VVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NAD 182 (309)
T ss_pred EecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHH
Confidence 45677889999999999999999999999999988877899999999997 9999999999999999999888776 554
Q ss_pred HHHHHcCCCEEEcCCCHHHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEE
Q 027664 81 EAVERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGG 159 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 159 (220)
.+ +.+|.+.+++....+..+... +++|.++||+|+. ....++++++++|+++.+|....... ....++.++..
T Consensus 183 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~ 256 (309)
T cd05289 183 FL-RSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGF 256 (309)
T ss_pred HH-HHcCCCEEEeCCCCchhhccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEE
Confidence 44 778988888765533222122 3799999999987 68899999999999999986543211 22344555555
Q ss_pred EecCC-HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 160 SLIGG-LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 160 ~~~~~-~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
..... ...+..++++++++.+.+.+ +.|++++++++++.+..++..+|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 257 VFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred EEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 43322 56788899999999987665 89999999999999998877778763
No 122
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.86 E-value=2e-20 Score=150.16 Aligned_cols=203 Identities=23% Similarity=0.245 Sum_probs=151.2
Q ss_pred ceEeCCCCCCccccccccchhhhhhhHHHhhc-CCCCCCEEEEEcc-chhHHHHHHHHHHC-CC-eEEEEeCCccchHHH
Q 027664 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEA 82 (220)
Q Consensus 7 ~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~vlI~G~-g~~G~~~~~la~~~-g~-~vi~~~~~~~~~~~~ 82 (220)
.++++|+++++++++.++..+.|||+++.... .+++|++++|+|+ |.+|++++++|+.. |. +++.+.. +++...+
T Consensus 115 ~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~ 193 (352)
T cd08247 115 SITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELN 193 (352)
T ss_pred eeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHH
Confidence 68999999999999999999999999998876 6899999999998 79999999999987 55 5666654 4444444
Q ss_pred HHHcCCCEEEcCCCHH---H----HHHhc--CCccEEEEcCCCcccHHHHHhccc---cCCEEEEeCCCCC-CCC-----
Q 027664 83 VERLGADSFLVSRDQD---E----MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK---SQGKLVLLGAPEK-PLE----- 144 (220)
Q Consensus 83 ~~~~g~~~~~~~~~~~---~----~~~~~--~~~d~v~d~~g~~~~~~~~~~~l~---~~G~~v~~g~~~~-~~~----- 144 (220)
+++|++.+++..+.+ . ++..+ +++|++|||+|+......++++++ ++|+++.++.... ...
T Consensus 194 -~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~ 272 (352)
T cd08247 194 -KKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFN 272 (352)
T ss_pred -HHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhh
Confidence 789998888865433 1 23333 379999999998546788899999 9999998743221 111
Q ss_pred ------CCch----hhhcCCeEEEEEec-CCHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 145 ------LPAF----PLLTGRKIVGGSLI-GGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 145 ------~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.... ....+...+..... ...+.++.+++++.+|.+.+.+ +.++++++++|++.+++++..||++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 273 SWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred hccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 0001 11122223332221 1235678889999999988766 899999999999999988888999875
No 123
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.86 E-value=3.8e-20 Score=146.59 Aligned_cols=208 Identities=23% Similarity=0.305 Sum_probs=165.5
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.++|+++.....+.++++++|+|+ |.+|++++++++..|++++.++.+.++.+
T Consensus 104 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~ 183 (328)
T cd08268 104 LVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD 183 (328)
T ss_pred EechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45778899999999999999999999999999987777889999999997 99999999999999999999998887776
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-CCCCchhhhcCC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGR 154 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +.+|.+.+++....+ .+.+... ++|++++++|+. ....++++++++|+++.+|..... ..++....+.++
T Consensus 184 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 261 (328)
T cd08268 184 AL-LALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKS 261 (328)
T ss_pred HH-HHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcC
Confidence 66 678888888766533 2333333 799999999986 688899999999999999865432 234444356778
Q ss_pred eEEEEEecCC----HH----HHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEE
Q 027664 155 KIVGGSLIGG----LK----ETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~~~~~~~~~----~~----~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~ 211 (220)
.++.+..... .. .++.+.+++.++.+.+.. ..|++++++++++.+..++..+|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 262 LTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred CEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 8877765432 22 345556667788887655 789999999999999888877899875
No 124
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.86 E-value=3.2e-20 Score=147.03 Aligned_cols=208 Identities=25% Similarity=0.387 Sum_probs=158.0
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~ 80 (220)
.++++.++++|+++++.+++++++.+.++++++.....+.+|++++|+|+ |.+|++++++++..|++++++. ++++.+
T Consensus 101 ~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~ 179 (325)
T cd08271 101 VVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFE 179 (325)
T ss_pred EeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHH
Confidence 45678899999999999999999999999999988877899999999998 8999999999999999988876 555555
Q ss_pred HHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCc--hhhhcC
Q 027664 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA--FPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~ 153 (220)
.+ +.+|++.+++..... .+.+..+ ++|.+++|+++. .....+++++++|+++.++.......... .....+
T Consensus 180 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~ 257 (325)
T cd08271 180 YV-KSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVH 257 (325)
T ss_pred HH-HHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEE
Confidence 44 678998888766532 3444433 799999999987 46778999999999999875432211111 111223
Q ss_pred CeEEEEEecCC--------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEEEe
Q 027664 154 RKIVGGSLIGG--------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 154 ~~~~~~~~~~~--------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 212 (220)
++.+.+..... .+.+.++++++.++.+.+.. +.|+++++.++++.+.++...+|+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 258 EVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred EEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 33333332211 13356788899999887654 8899999999999999888788998763
No 125
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.86 E-value=3.4e-20 Score=143.12 Aligned_cols=172 Identities=32% Similarity=0.423 Sum_probs=141.9
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHH
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++++++.++..+.+||+++.....+.++++|+|+|+|++|++++++++..|.+|++++.++++.+.
T Consensus 94 ~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 94 VVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred EechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 46778999999999999999999999999999988887789999999998559999999999999999999998877665
Q ss_pred HHHHcCCCEEEcCCCHHHHHH--h-c-CCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCC-CchhhhcCCeE
Q 027664 82 AVERLGADSFLVSRDQDEMQA--A-M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLEL-PAFPLLTGRKI 156 (220)
Q Consensus 82 ~~~~~g~~~~~~~~~~~~~~~--~-~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~ 156 (220)
+ +.+|.+.+++..+.+.... . . +++|+++|+++.......++++++++|+++.+|........ .....+.++++
T Consensus 174 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~ 252 (271)
T cd05188 174 A-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELT 252 (271)
T ss_pred H-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccHHHHHhcceE
Confidence 5 6788888887665433222 2 2 37999999999844688899999999999999876644322 24556889999
Q ss_pred EEEEecCCHHHHHHHHHH
Q 027664 157 VGGSLIGGLKETQEMIDF 174 (220)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~ 174 (220)
+.++..+.+.+++.++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~ 270 (271)
T cd05188 253 IIGSTGGTREDFEEALDL 270 (271)
T ss_pred EEEeecCCHHHHHHHHhh
Confidence 999998888888887765
No 126
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.85 E-value=2.1e-19 Score=143.00 Aligned_cols=208 Identities=25% Similarity=0.324 Sum_probs=159.3
Q ss_pred cccccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHC-CCeEEEEeCCccch
Q 027664 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKK 79 (220)
Q Consensus 2 ~v~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~-g~~vi~~~~~~~~~ 79 (220)
.++.+.++++|+++++++++.+++.+.++|+++.....++++++|+|+|+ |.+|++++++++.. +..++.. ..+++.
T Consensus 98 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~ 176 (337)
T cd08275 98 NVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKH 176 (337)
T ss_pred EecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHH
Confidence 35677899999999999999999999999999887777899999999997 99999999999998 3333322 223344
Q ss_pred HHHHHHcCCCEEEcCCCH---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCC-------------
Q 027664 80 SEAVERLGADSFLVSRDQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP------------- 142 (220)
Q Consensus 80 ~~~~~~~g~~~~~~~~~~---~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------------- 142 (220)
..+ +.+|++.+++.... +.+....+ ++|+++||+|+. ....++++++++|+++.+|.....
T Consensus 177 ~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 254 (337)
T cd08275 177 EAL-KENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKK 254 (337)
T ss_pred HHH-HHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccc
Confidence 444 67898888876653 23444433 799999999987 578899999999999999865421
Q ss_pred ----CCCCchhhhcCCeEEEEEecCC--------HHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEE
Q 027664 143 ----LELPAFPLLTGRKIVGGSLIGG--------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFV 209 (220)
Q Consensus 143 ----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~v 209 (220)
..+.....+.++.++.++.... ...+.++++++.++.+.+.. +.|++++++++++.+.+++..+|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv 334 (337)
T cd08275 255 WWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVV 334 (337)
T ss_pred cccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEE
Confidence 1122234567788887765421 12366788889999888766 8899999999999999888789998
Q ss_pred EEe
Q 027664 210 IDV 212 (220)
Q Consensus 210 v~~ 212 (220)
+++
T Consensus 335 ~~~ 337 (337)
T cd08275 335 LTP 337 (337)
T ss_pred EeC
Confidence 864
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.82 E-value=1.1e-19 Score=125.53 Aligned_cols=124 Identities=31% Similarity=0.484 Sum_probs=109.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhcc
Q 027664 53 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLL 127 (220)
Q Consensus 53 ~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~--~~d~v~d~~g~~~~~~~~~~~l 127 (220)
++|++++|+|++.|++|++++.++++++.+ +++|+++++++++.+ .++++++ ++|+||||+|....++.++.++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~-~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA-KELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHH-HhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 589999999999999999999998776555 789999999998753 5666665 6999999999777899999999
Q ss_pred ccCCEEEEeCCCC-CCCCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHc
Q 027664 128 KSQGKLVLLGAPE-KPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAK 177 (220)
Q Consensus 128 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 177 (220)
+++|+++.+|... ...+++...++.+++++.|++.++.++++++++++++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999988 5578899999999999999999999999999988764
No 128
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.69 E-value=6e-16 Score=124.47 Aligned_cols=173 Identities=15% Similarity=0.074 Sum_probs=134.4
Q ss_pred hhHHHhh-cCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccE
Q 027664 31 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 31 ~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~ 109 (220)
+.++.+. +...+|++|+|+|+|++|+.+++.++.+|++|++++.++.+.+.+ +.+|++.+ + ..+...++|+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~-~------~~e~v~~aDV 260 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVM-T------MEEAVKEGDI 260 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEc-c------HHHHHcCCCE
Confidence 4444443 334689999999999999999999999999999998888776655 67888533 2 1223357899
Q ss_pred EEEcCCCcccHHHH-HhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEecCCHH-HHH--HHHHHHHcCCC-ccc-
Q 027664 110 IIDTVSAVHPLMPL-IGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLK-ETQ--EMIDFAAKHNI-RAD- 183 (220)
Q Consensus 110 v~d~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~~g~i-~~~- 183 (220)
||+|+|....+... ++.++++|+++.+|.. +.+++...+..+++++.+++.+... +++ ..+.++++|++ +..
T Consensus 261 VI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~ 338 (413)
T cd00401 261 FVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGC 338 (413)
T ss_pred EEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcc
Confidence 99999988777765 9999999999999954 5678888888899999998876533 455 68999999998 433
Q ss_pred -e-EE-----eecc-cHHHHHHHHHcCCCc-eeEEEEeC
Q 027664 184 -I-EV-----IPAD-YVNTAMERLAKADVR-YRFVIDVA 213 (220)
Q Consensus 184 -~-~~-----~~~~-~~~~a~~~~~~~~~~-gk~vv~~~ 213 (220)
+ |. ++|+ ++.++++.+.++... .|+++.+.
T Consensus 339 ~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 339 ATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred cCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 3 66 8899 999999999876543 57776664
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.69 E-value=4.1e-17 Score=112.11 Aligned_cols=117 Identities=30% Similarity=0.420 Sum_probs=78.7
Q ss_pred cCCCEEEcCCCHHHHHHhcCCccEEEEcCC--CcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEecC
Q 027664 86 LGADSFLVSRDQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIG 163 (220)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (220)
||+++++|+++.+. ...+++|+||||+| ....+..+.+++ ++|+++.++. .........+...+......
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~ 72 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF 72 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence 68999999996555 22458999999999 554457777888 9999999974 11111111222222222222
Q ss_pred -------CHHHHHHHHHHHHcCCCccce-EEeecccHHHHHHHHHcCCCceeEEE
Q 027664 164 -------GLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 164 -------~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~~a~~~~~~~~~~gk~vv 210 (220)
..+.++++.+++++|++++.+ ++|||+++++|++.+++++..||+||
T Consensus 73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 234599999999999999999 79999999999999999999999996
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.61 E-value=3.8e-14 Score=116.89 Aligned_cols=142 Identities=20% Similarity=0.185 Sum_probs=109.2
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCH-------------HH---HHH-
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQ-------------DE---MQA- 102 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~~---~~~- 102 (220)
.++++|+|+|+|++|+++++.|+.+|++|++++.++++++++ +++|++.+ +|..+. +. ..+
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a-eslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV-ESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 579999999999999999999999999999999999887766 67999854 554321 11 111
Q ss_pred hc---CCccEEEEcCCCcc-----c-HHHHHhccccCCEEEEeCCCC-CC--CCCCchhhhc-CCeEEEEEecCCHHHHH
Q 027664 103 AM---GTMDGIIDTVSAVH-----P-LMPLIGLLKSQGKLVLLGAPE-KP--LELPAFPLLT-GRKIVGGSLIGGLKETQ 169 (220)
Q Consensus 103 ~~---~~~d~v~d~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 169 (220)
+. +++|++|+|+|.+. . .+++++.++++|+++.+|... +. .+.+...++. +++++.|.+....+...
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~ 321 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT 321 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence 12 47999999999642 4 489999999999999999853 33 3444556665 89999998866644445
Q ss_pred HHHHHHHcCCCccc
Q 027664 170 EMIDFAAKHNIRAD 183 (220)
Q Consensus 170 ~~~~~i~~g~i~~~ 183 (220)
+..+++.++.++..
T Consensus 322 ~As~lla~~~i~l~ 335 (509)
T PRK09424 322 QSSQLYGTNLVNLL 335 (509)
T ss_pred HHHHHHHhCCccHH
Confidence 68999999887643
No 131
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=99.04 E-value=2.2e-09 Score=83.28 Aligned_cols=166 Identities=19% Similarity=0.216 Sum_probs=99.5
Q ss_pred CCCCCCEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCccchHHHHHH---cCCCEE-EcCCCHHHHHHh--c-CCccE
Q 027664 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVER---LGADSF-LVSRDQDEMQAA--M-GTMDG 109 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~la~~~g~--~vi~~~~~~~~~~~~~~~---~g~~~~-~~~~~~~~~~~~--~-~~~d~ 109 (220)
.+++|++||.+|+|+ |..+.++++..|. +|++++.+++..+.+.+. ++.+.+ +...+ +.++ . +.||+
T Consensus 74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d---~~~l~~~~~~fD~ 149 (272)
T PRK11873 74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGE---IEALPVADNSVDV 149 (272)
T ss_pred cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcc---hhhCCCCCCceeE
Confidence 468999999999987 8888888888775 699999998876665432 333222 11111 2222 2 37999
Q ss_pred EEEc-CC-----CcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHc-CCCcc
Q 027664 110 IIDT-VS-----AVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAK-HNIRA 182 (220)
Q Consensus 110 v~d~-~g-----~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-g~i~~ 182 (220)
|+.. +. ....+..+.+.|++||+++..+..... .. ...+.+...+.+..........++.+++.+ |....
T Consensus 150 Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v 226 (272)
T PRK11873 150 IISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-EL--PEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDI 226 (272)
T ss_pred EEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CC--CHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCce
Confidence 9843 32 123578999999999999987764322 11 111222222222111111234455566665 43333
Q ss_pred ce---EEeecccHHHHHHHH--HcCCCceeEEEE
Q 027664 183 DI---EVIPADYVNTAMERL--AKADVRYRFVID 211 (220)
Q Consensus 183 ~~---~~~~~~~~~~a~~~~--~~~~~~gk~vv~ 211 (220)
.+ +.++++++.++++.+ .++...++.+..
T Consensus 227 ~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 260 (272)
T PRK11873 227 TIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS 260 (272)
T ss_pred EEEeccceecccHHHHHHHhccccccccCceEEE
Confidence 33 568899999999988 555544555543
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=99.00 E-value=1.2e-08 Score=82.80 Aligned_cols=107 Identities=17% Similarity=0.185 Sum_probs=81.1
Q ss_pred hhhhhHHHhhcCC-CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCC
Q 027664 28 ITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGT 106 (220)
Q Consensus 28 ~ta~~~l~~~~~~-~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 106 (220)
..+|.++.+...+ ..|++|+|+|.|.+|..+++.++.+|++|++++.++.+..++ ...|++ +.+ +.+...+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-~~~G~~-v~~------l~eal~~ 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQA-AMDGFR-VMT------MEEAAEL 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-HhcCCE-ecC------HHHHHhC
Confidence 3345666655333 389999999999999999999999999999999887765554 344654 221 2333458
Q ss_pred ccEEEEcCCCcccHH-HHHhccccCCEEEEeCCCCCC
Q 027664 107 MDGIIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKP 142 (220)
Q Consensus 107 ~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~ 142 (220)
+|++|+|+|....+. ..+..+++++.++..|.....
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~E 304 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNE 304 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCc
Confidence 999999999876665 678899999999999876643
No 133
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.96 E-value=6.8e-08 Score=75.60 Aligned_cols=110 Identities=19% Similarity=0.244 Sum_probs=81.8
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 121 (220)
.+++++|+|.|.+|+.+++.++.+|++|++++++.++..++ +.+|++.+ . .+.+.+...++|+||+|++......
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~-~---~~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPF-H---LSELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeee-c---HHHHHHHhCCCCEEEECCChhhhhH
Confidence 68999999999999999999999999999999997765555 56776533 1 2334455568999999998654446
Q ss_pred HHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEE
Q 027664 122 PLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVG 158 (220)
Q Consensus 122 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 158 (220)
..++.+++++.++.++...+...+ .....++.+..
T Consensus 226 ~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~ 260 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKAL 260 (296)
T ss_pred HHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEE
Confidence 677889999999999877655444 22233444444
No 134
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.95 E-value=2.1e-08 Score=83.02 Aligned_cols=121 Identities=24% Similarity=0.257 Sum_probs=84.8
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCC-------------HHH-------
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRD-------------QDE------- 99 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~-------------~~~------- 99 (220)
.++++++|+|+|.+|+++++.++.+|++|++++.+.++++.+ +.+|++.+ ++..+ .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 367899999999999999999999999999999998876666 67998653 33211 111
Q ss_pred HHHhcCCccEEEEcC---CCcc---cHHHHHhccccCCEEEEeCCCCCC-CCCC-chhhhc--CCeEEEEEec
Q 027664 100 MQAAMGTMDGIIDTV---SAVH---PLMPLIGLLKSQGKLVLLGAPEKP-LELP-AFPLLT--GRKIVGGSLI 162 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~~-~~~~-~~~~~~--~~~~~~~~~~ 162 (220)
..+...++|++|+|+ |.+. ..++.++.+++|+.++.++...+. .+.. +.+.+. .++.+.+...
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~n 313 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTD 313 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCC
Confidence 112224899999999 6543 467889999999999998876542 2222 112222 3466666544
No 135
>PLN02494 adenosylhomocysteinase
Probab=98.92 E-value=4.7e-08 Score=79.82 Aligned_cols=102 Identities=17% Similarity=0.158 Sum_probs=77.6
Q ss_pred hhHHHhhcC-CCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccE
Q 027664 31 YSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 31 ~~~l~~~~~-~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~ 109 (220)
+.++.+... .-.|++++|+|.|.+|..+++.++.+|++|+++..++.+..++ ...|+..+ . +.+.....|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv----~---leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL----T---LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec----c---HHHHHhhCCE
Confidence 444444422 3579999999999999999999999999999998887665444 34566422 1 2233347899
Q ss_pred EEEcCCCcccH-HHHHhccccCCEEEEeCCCC
Q 027664 110 IIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 110 v~d~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 140 (220)
+++|.|+...+ ...++.|++++.++.+|...
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 99999987654 78999999999999998754
No 136
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.89 E-value=1.1e-07 Score=76.78 Aligned_cols=100 Identities=20% Similarity=0.244 Sum_probs=76.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCC---C--
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS---A-- 116 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g---~-- 116 (220)
++.+|+|+|+|.+|+.+++.++.+|++|++++++.++.+.+.+.++........+.+.+.+....+|++|+|++ .
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 34569999999999999999999999999999988777777666665433344445556666678999999983 2
Q ss_pred cc-cHHHHHhccccCCEEEEeCCCCC
Q 027664 117 VH-PLMPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 117 ~~-~~~~~~~~l~~~G~~v~~g~~~~ 141 (220)
+. .....++.+++++.++.++...+
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d~G 271 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAIDQG 271 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecCCC
Confidence 21 13677888999999999887643
No 137
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.81 E-value=2.5e-08 Score=78.68 Aligned_cols=108 Identities=20% Similarity=0.256 Sum_probs=78.9
Q ss_pred ceEeCCCCCCccccccccchhhhhhhHHHhhcCC---CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHH
Q 027664 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD---KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (220)
Q Consensus 7 ~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~---~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~ 82 (220)
.++++|+.++.+.+++.. +...++.++...... .++.+|+|+|+|.+|..+++.++..|+ +|+++.++.++...+
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 456778888888877544 344555565544321 378999999999999999999988886 888898888877778
Q ss_pred HHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 83 VERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 83 ~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
++.+|.. +++. +.+.+....+|+||.|++.+..
T Consensus 219 a~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL---DELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence 7888874 3332 2233444578999999998854
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.80 E-value=1.3e-07 Score=76.54 Aligned_cols=102 Identities=22% Similarity=0.185 Sum_probs=76.6
Q ss_pred hhHHHhh-cCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccE
Q 027664 31 YSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 31 ~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~ 109 (220)
+.++.+. +....|++|+|+|.|.+|+.+++.++.+|++|++++.++.+..++ ...|+. +.+ +.+...+.|+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~------leeal~~aDV 253 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFR-VMT------MEEAAKIGDI 253 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCE-eCC------HHHHHhcCCE
Confidence 3444343 223689999999999999999999999999999998887665444 445653 221 1223357899
Q ss_pred EEEcCCCcccHHH-HHhccccCCEEEEeCCCC
Q 027664 110 IIDTVSAVHPLMP-LIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 110 v~d~~g~~~~~~~-~~~~l~~~G~~v~~g~~~ 140 (220)
+|+++|+...+.. .+..+++++.++.+|...
T Consensus 254 VItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 254 FITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 9999998876664 888999999999998754
No 139
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.68 E-value=9.4e-08 Score=81.59 Aligned_cols=119 Identities=24% Similarity=0.255 Sum_probs=75.5
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCc---------------------cchHHHHHHcCCCEEEcCCC-H
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP---------------------SKKSEAVERLGADSFLVSRD-Q 97 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~---------------------~~~~~~~~~~g~~~~~~~~~-~ 97 (220)
.++|++|+|+|+|+.|+++++.++..|++|++++..+ .+.+ .++++|++..++... .
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~-~~~~~Gv~~~~~~~~~~ 212 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQ-RILDLGVEVRLGVRVGE 212 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHH-HHHHCCCEEEeCCEECC
Confidence 5789999999999999999999999999999887532 1223 345789877766433 2
Q ss_pred H-HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEE
Q 027664 98 D-EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGS 160 (220)
Q Consensus 98 ~-~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 160 (220)
+ .......++|+||+++|........+.....+|.+..++......... .....+++.+.|.
T Consensus 213 ~~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~~~~~-~~~~gk~v~ViGg 275 (564)
T PRK12771 213 DITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGEGE-PPFLGKRVVVIGG 275 (564)
T ss_pred cCCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHhhccC-CcCCCCCEEEECC
Confidence 1 122333479999999998654444444455556655544322111111 2233456666663
No 140
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.55 E-value=2.6e-06 Score=66.39 Aligned_cols=99 Identities=19% Similarity=0.313 Sum_probs=73.4
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 121 (220)
.|++++|+|.|.+|..+++.++.+|++|++..++.++...+ ..+|...+ ..+.+.+....+|+||+|++....-.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~----~~~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF----PLNKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee----cHHHHHHHhccCCEEEECCChHHhCH
Confidence 57899999999999999999999999999999987665554 34554322 22334455568999999997652234
Q ss_pred HHHhccccCCEEEEeCCCCCCCCC
Q 027664 122 PLIGLLKSQGKLVLLGAPEKPLEL 145 (220)
Q Consensus 122 ~~~~~l~~~G~~v~~g~~~~~~~~ 145 (220)
..++.++++..++.++...+...|
T Consensus 225 ~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred HHHhcCCCCeEEEEeCcCCCCCCH
Confidence 567788888888888776554444
No 141
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.46 E-value=5.4e-07 Score=62.33 Aligned_cols=96 Identities=20% Similarity=0.349 Sum_probs=66.1
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCC--EEEcCCCHHHHHHhcCCccEEEEcCCCc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 117 (220)
-.+.+++|+|+|++|.+++..+...|+ +++++.++.++.+.+.+.++.. ..+...+ +.+....+|++|+|++..
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence 358999999999999999999999999 6999999999888888887432 2333332 223345899999999876
Q ss_pred cc--HHHHHhcccc-CCEEEEeCCC
Q 027664 118 HP--LMPLIGLLKS-QGKLVLLGAP 139 (220)
Q Consensus 118 ~~--~~~~~~~l~~-~G~~v~~g~~ 139 (220)
.. ....+....+ -+.++.++.+
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES-SS
T ss_pred CcccCHHHHHHHHhhhhceeccccC
Confidence 32 1223332222 2577777653
No 142
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.44 E-value=5.7e-07 Score=74.02 Aligned_cols=106 Identities=24% Similarity=0.339 Sum_probs=72.1
Q ss_pred EeCCCCCCccccccccchhhhhhhHHHhhcC---CCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHH
Q 027664 9 VRIPEGAPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (220)
Q Consensus 9 ~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~ 84 (220)
+++|+.+..+.+. .......++.++..... -.++++|+|+|+|.+|..+++.++..|+ +|+++.++.++...+++
T Consensus 146 ~~~~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~ 224 (423)
T PRK00045 146 FSVAKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAE 224 (423)
T ss_pred HHHHhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence 3455555444332 22233444555544332 2578999999999999999999999998 89999998877777777
Q ss_pred HcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 85 RLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 85 ~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
.+|.+ +++. +...+...++|+||+|+|.+..
T Consensus 225 ~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 225 EFGGE-AIPL---DELPEALAEADIVISSTGAPHP 255 (423)
T ss_pred HcCCc-EeeH---HHHHHHhccCCEEEECCCCCCc
Confidence 88764 3322 2233444589999999998643
No 143
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.42 E-value=3.5e-06 Score=69.26 Aligned_cols=93 Identities=17% Similarity=0.225 Sum_probs=73.4
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
.-.|++++|+|.|.+|..+++.++.+|++|+++..++.+..++ ...|+..+ + +.+.....|+++.++|....
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~~G~~~~----~---leell~~ADIVI~atGt~~i 322 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQA-AMEGYQVV----T---LEDVVETADIFVTATGNKDI 322 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-HhcCceec----c---HHHHHhcCCEEEECCCcccc
Confidence 3579999999999999999999999999999988776654444 33465322 1 33445689999999998766
Q ss_pred HH-HHHhccccCCEEEEeCCCC
Q 027664 120 LM-PLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 120 ~~-~~~~~l~~~G~~v~~g~~~ 140 (220)
+. ..+..|++++.++.+|...
T Consensus 323 I~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 323 ITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred cCHHHHhccCCCcEEEEcCCCc
Confidence 64 7899999999999998764
No 144
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.27 E-value=6.7e-06 Score=61.36 Aligned_cols=75 Identities=17% Similarity=0.306 Sum_probs=61.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC----CCEEEcCCCHHHH----HHhc---CCccE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEM----QAAM---GTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~----~~~~---~~~d~ 109 (220)
.++.++|.|+ +++|.++++.+...|++|+.+.++.+++++++.+++ ....+|..+.+.+ ..+. +.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4578999998 899999999999999999999999999999999998 2445677776543 3332 36999
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
.++-+|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9998875
No 145
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.25 E-value=1.1e-05 Score=66.44 Aligned_cols=75 Identities=20% Similarity=0.400 Sum_probs=58.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
.++++++|+|+|.+|..+++.++..|+ +|+++.++.++...+++.+|.. .++. +...+...++|+||.|++.+..
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~---~~l~~~l~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF---EDLEEYLAEADIVISSTGAPHP 253 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH---HHHHHHHhhCCEEEECCCCCCc
Confidence 678999999999999999999999995 8999999987767677777764 2222 2333444589999999987653
No 146
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.19 E-value=1.8e-05 Score=63.59 Aligned_cols=97 Identities=24% Similarity=0.247 Sum_probs=74.5
Q ss_pred CEEEEEccchhHHHHHHHHHHCC-CeEEEEeCCccchHHHHHHc--CC-CEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 44 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERL--GA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~la~~~g-~~vi~~~~~~~~~~~~~~~~--g~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
.+|||+|+|.+|+.+++.+.+.| .+|++.+++.++..++...- +. ...+|..+.+.+.++..++|+||+|.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 46899999999999999988888 59999999988877774432 22 4556777777888888888999999998755
Q ss_pred HHHHHhccccCCEEEEeCCCC
Q 027664 120 LMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+..+-.|++.+=.++.+....
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCC
Confidence 544556666666777766544
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=98.16 E-value=1.7e-05 Score=69.34 Aligned_cols=75 Identities=25% Similarity=0.331 Sum_probs=56.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC-----CEEEcCCCHHHHHHh-------cCCcc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-----DSFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~-------~~~~d 108 (220)
+|+++||.|+ |++|..+++.+...|++|++++++.++.+.+.+.++. ....|..+.+.+.+. .+++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999996 9999999999999999999999998776666555543 122355555444332 24799
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++|+++|.
T Consensus 501 vvI~~AG~ 508 (681)
T PRK08324 501 IVVSNAGI 508 (681)
T ss_pred EEEECCCC
Confidence 99999983
No 148
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.14 E-value=1.7e-05 Score=57.61 Aligned_cols=92 Identities=26% Similarity=0.320 Sum_probs=67.5
Q ss_pred EEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHhcCCccEEEEcCCCcc----c
Q 027664 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH----P 119 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~~~----~ 119 (220)
|+|.|+ |.+|..+++.+...|.+|+++++++++.+. ..+++.+ .|..+.+.+.+...++|.||.++|... .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689998 999999999999999999999999886665 3344433 355566777777779999999998532 2
Q ss_pred HHHHHhccccCC--EEEEeCCCC
Q 027664 120 LMPLIGLLKSQG--KLVLLGAPE 140 (220)
Q Consensus 120 ~~~~~~~l~~~G--~~v~~g~~~ 140 (220)
....++.++..| +++.++...
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccceeeeccc
Confidence 445555554443 677665443
No 149
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.13 E-value=1.3e-05 Score=58.19 Aligned_cols=75 Identities=16% Similarity=0.182 Sum_probs=58.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC--CCEEEcCCCHHHHH----HhcC---CccEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--ADSFLVSRDQDEMQ----AAMG---TMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~----~~~~---~~d~v~ 111 (220)
.|.+|||.|+ +++|+..++-....|-+||++.++++++++.+.... .+.+.|..+.+..+ ++.+ ..++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 5789999986 899999999999999999999999999998866655 25566666654333 3322 678899
Q ss_pred EcCCC
Q 027664 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
+++|-
T Consensus 84 NNAGI 88 (245)
T COG3967 84 NNAGI 88 (245)
T ss_pred ecccc
Confidence 88874
No 150
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.13 E-value=4.1e-05 Score=64.64 Aligned_cols=78 Identities=21% Similarity=0.233 Sum_probs=58.9
Q ss_pred CCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc--------C------CCE-EEcCCCHHHHHHh
Q 027664 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--------G------ADS-FLVSRDQDEMQAA 103 (220)
Q Consensus 40 ~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~--------g------~~~-~~~~~~~~~~~~~ 103 (220)
.+.|+++||.|+ |.+|..+++.+...|.+|++++++.++...+.+.+ | +.. ..|..+.+.+.+.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 568899999997 99999999988888999999999887665543321 1 111 2355566667666
Q ss_pred cCCccEEEEcCCCc
Q 027664 104 MGTMDGIIDTVSAV 117 (220)
Q Consensus 104 ~~~~d~v~d~~g~~ 117 (220)
.+++|+||.++|..
T Consensus 157 LggiDiVVn~AG~~ 170 (576)
T PLN03209 157 LGNASVVICCIGAS 170 (576)
T ss_pred hcCCCEEEEccccc
Confidence 67899999999853
No 151
>PRK12742 oxidoreductase; Provisional
Probab=98.10 E-value=5.8e-05 Score=57.11 Aligned_cols=75 Identities=21% Similarity=0.286 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCC-ccchHHHHHHcCCCEE-EcCCCHHHHHHhc---CCccEEEEcCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERLGADSF-LVSRDQDEMQAAM---GTMDGIIDTVS 115 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~-~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~---~~~d~v~d~~g 115 (220)
.++++||.|+ |++|..+++.+...|++|+.+.++ .++.+++.+.++...+ .|..+.+.+.+.. +++|++++++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4789999997 999999999988899998877653 4444455455565433 3555554444332 36999999987
Q ss_pred C
Q 027664 116 A 116 (220)
Q Consensus 116 ~ 116 (220)
.
T Consensus 85 ~ 85 (237)
T PRK12742 85 I 85 (237)
T ss_pred C
Confidence 5
No 152
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.09 E-value=2.6e-05 Score=56.59 Aligned_cols=121 Identities=19% Similarity=0.312 Sum_probs=81.4
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcc--
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-- 118 (220)
-.|++|.|+|.|.+|..+++.++.+|++|++.+++....... ...+.. ..+ ++++....|+|+.+.....
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~----~~~---l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVE----YVS---LDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEE----ESS---HHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-ccccce----eee---hhhhcchhhhhhhhhcccccc
Confidence 468999999999999999999999999999999998644322 334431 222 3334446799998887421
Q ss_pred ---cHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccHH
Q 027664 119 ---PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVN 193 (220)
Q Consensus 119 ---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~~ 193 (220)
.=...+..|+++..+|.++-.. .-+-+.+++++++|++.--. ++|.-|..+
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG~------------------------~vde~aL~~aL~~g~i~ga~lDV~~~EP~~ 160 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARGE------------------------LVDEDALLDALESGKIAGAALDVFEPEPLP 160 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSGG------------------------GB-HHHHHHHHHTTSEEEEEESS-SSSSSS
T ss_pred ceeeeeeeeeccccceEEEeccchh------------------------hhhhhHHHHHHhhccCceEEEECCCCCCCC
Confidence 1246788999999888875321 12356788889999988543 666655444
No 153
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=4e-05 Score=56.21 Aligned_cols=98 Identities=29% Similarity=0.304 Sum_probs=70.8
Q ss_pred hcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHH---HHHcCCCEE-EcCCCHHHHHHhc--CCccEE
Q 027664 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---VERLGADSF-LVSRDQDEMQAAM--GTMDGI 110 (220)
Q Consensus 37 ~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~---~~~~g~~~~-~~~~~~~~~~~~~--~~~d~v 110 (220)
...++++++||-+|+| .|..++-+++..| +|+.+.+.++-.+.+ ++.+|...+ +...|- ..-+. ..||.+
T Consensus 67 ~L~~~~g~~VLEIGtG-sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG--~~G~~~~aPyD~I 142 (209)
T COG2518 67 LLELKPGDRVLEIGTG-SGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG--SKGWPEEAPYDRI 142 (209)
T ss_pred HhCCCCCCeEEEECCC-chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc--ccCCCCCCCcCEE
Confidence 3447999999999997 4999999999888 999998887643333 345676333 222221 11111 279999
Q ss_pred EEcCCCcccHHHHHhccccCCEEEEeCC
Q 027664 111 IDTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 111 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (220)
+-+.+.+..-+.+++.|++||+++..-.
T Consensus 143 ~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 143 IVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred EEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 9888887777899999999999987543
No 154
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=98.07 E-value=8.4e-05 Score=53.20 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=69.9
Q ss_pred cccccccchhhhhhhHHHhhcCCCCCCEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCC
Q 027664 18 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD 96 (220)
Q Consensus 18 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~ 96 (220)
....-.|+...++...+.....--.|++++|+|+|. +|..++..++..|++|+++.++.+
T Consensus 19 ~~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~------------------- 79 (168)
T cd01080 19 GRPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK------------------- 79 (168)
T ss_pred CCCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch-------------------
Confidence 334556776666666666554336889999999986 599999999999999888877632
Q ss_pred HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 97 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 97 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.+.+....+|+||-|++.+..+.. +.++++-.++.++.+.
T Consensus 80 --~l~~~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 80 --NLKEHTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred --hHHHHHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 122334578999999998754333 2456666777777654
No 155
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=98.06 E-value=7.4e-05 Score=52.67 Aligned_cols=96 Identities=20% Similarity=0.267 Sum_probs=65.8
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCc
Q 027664 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 117 (220)
...-.|++++|.|=|.+|.-+++.++.+|++|+++...+-+..++. .-|.... .+.+.....|+++-++|+.
T Consensus 18 ~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~-------~~~~a~~~adi~vtaTG~~ 89 (162)
T PF00670_consen 18 NLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM-------TLEEALRDADIFVTATGNK 89 (162)
T ss_dssp -S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE--------HHHHTTT-SEEEE-SSSS
T ss_pred ceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec-------CHHHHHhhCCEEEECCCCc
Confidence 3346799999999999999999999999999999999987665552 3455322 2445566889999999997
Q ss_pred ccH-HHHHhccccCCEEEEeCCCCC
Q 027664 118 HPL-MPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 118 ~~~-~~~~~~l~~~G~~v~~g~~~~ 141 (220)
..+ .+-+..|+++..++.+|....
T Consensus 90 ~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 90 DVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp SSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred cccCHHHHHHhcCCeEEeccCcCce
Confidence 643 577888988888888875543
No 156
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.04 E-value=4.2e-05 Score=58.98 Aligned_cols=99 Identities=19% Similarity=0.232 Sum_probs=79.2
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCC---Cc--
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS---AV-- 117 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g---~~-- 117 (220)
..+|.|+|+|.+|.-++.+|..+|++|++.+.+.+|+.++...++.....-++....+++...+.|++|.++- ..
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP 247 (371)
T ss_pred CccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence 3558888999999999999999999999999999998888666666533446667777777778999998762 21
Q ss_pred -ccHHHHHhccccCCEEEEeCCCCC
Q 027664 118 -HPLMPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 118 -~~~~~~~~~l~~~G~~v~~g~~~~ 141 (220)
-..++.++.|++|+.++.+....+
T Consensus 248 kLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred eehhHHHHHhcCCCcEEEEEEEcCC
Confidence 135788999999999999887654
No 157
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.03 E-value=7.2e-05 Score=56.62 Aligned_cols=99 Identities=21% Similarity=0.341 Sum_probs=67.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC---CCEE--EcCCCHHHHHHh-------cCCcc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---ADSF--LVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~~~--~~~~~~~~~~~~-------~~~~d 108 (220)
++++++|.|+ |.+|..+++.+...|++|+.+++++++.+.+.+.+. ..+. .|..+.+.+.+. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999997 999999999999999999999998876655533332 1122 244444433222 23689
Q ss_pred EEEEcCCCcc-----------------------cHHHHHhccccCCEEEEeCCCC
Q 027664 109 GIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 109 ~v~d~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.++.++|... ..+..+.+++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999887421 1234455666788898887654
No 158
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=98.00 E-value=0.00015 Score=58.92 Aligned_cols=114 Identities=25% Similarity=0.202 Sum_probs=74.4
Q ss_pred ccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC-CCEEEcCCCHHH
Q 027664 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADSFLVSRDQDE 99 (220)
Q Consensus 21 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 99 (220)
.++..+....+..+.....+++|++||.+|+| .|..+..+++..|++|++++.+++..+.+.+... ...-+...+
T Consensus 146 ~~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--- 221 (383)
T PRK11705 146 DTLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQD--- 221 (383)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---
Confidence 34444444445544444457899999999986 5778888898889999999999887766654432 111111111
Q ss_pred HHHhcCCccEEEE-----cCCC---cccHHHHHhccccCCEEEEeCC
Q 027664 100 MQAAMGTMDGIID-----TVSA---VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 100 ~~~~~~~~d~v~d-----~~g~---~~~~~~~~~~l~~~G~~v~~g~ 138 (220)
...+.+.||.|+. .+|. ...+..+.+.|+++|.++....
T Consensus 222 ~~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i 268 (383)
T PRK11705 222 YRDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI 268 (383)
T ss_pred hhhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 2223347998863 3443 2346788889999999987643
No 159
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.97 E-value=3.7e-05 Score=58.75 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=59.4
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE-----E--EcCCCHHHHHHh----c---C
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----F--LVSRDQDEMQAA----M---G 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-----~--~~~~~~~~~~~~----~---~ 105 (220)
..+.++||.|| +++|...+..+...|.+++.+.++.++++++.+++.-.+ + +|..+.+.+..+ . .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 56789999998 899999999999999999999999999988877765211 2 355555443332 1 2
Q ss_pred CccEEEEcCCCc
Q 027664 106 TMDGIIDTVSAV 117 (220)
Q Consensus 106 ~~d~v~d~~g~~ 117 (220)
.+|+.++++|-.
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 699999999863
No 160
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.97 E-value=0.00016 Score=53.34 Aligned_cols=97 Identities=16% Similarity=0.215 Sum_probs=66.2
Q ss_pred CCCCCCEEEEEccchhHHHHHHHHHHCC--CeEEEEeCCccchHHHH---HHcC-CCE--EEcCCCHHHHHHhcCCccEE
Q 027664 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAV---ERLG-ADS--FLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~la~~~g--~~vi~~~~~~~~~~~~~---~~~g-~~~--~~~~~~~~~~~~~~~~~d~v 110 (220)
.+.++++|+.+|+|. |.+++.+++..+ .+|+.++.+++..+.+. +.++ .+. ++..+..+.+....+.+|.|
T Consensus 37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V 115 (198)
T PRK00377 37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI 115 (198)
T ss_pred CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence 378999999999987 998999888764 48999999987655442 3355 222 22222223333333579999
Q ss_pred EEcCCCc---ccHHHHHhccccCCEEEEe
Q 027664 111 IDTVSAV---HPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 111 ~d~~g~~---~~~~~~~~~l~~~G~~v~~ 136 (220)
|...+.. ..+..+.+.|+++|+++..
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 9865432 2467788899999999863
No 161
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.96 E-value=7.1e-05 Score=49.73 Aligned_cols=94 Identities=28% Similarity=0.325 Sum_probs=63.8
Q ss_pred CCCEEEEEccchhHHHHHHHHH-HCCCeEEEEeCCccchHHHHHHc---CC--CEEEcCCCHHHHHHhcCCccEEEEcC-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERL---GA--DSFLVSRDQDEMQAAMGTMDGIIDTV- 114 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~-~~g~~vi~~~~~~~~~~~~~~~~---g~--~~~~~~~~~~~~~~~~~~~d~v~d~~- 114 (220)
|+.+||-+|+|. |..++.+++ ..+++|++++.+++..+.+.+.. +. ...+...+........+.||+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 79 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF 79 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence 688999999974 888888888 47889999999998776665555 21 21122222211222334799999766
Q ss_pred CCc---c------cHHHHHhccccCCEEEEe
Q 027664 115 SAV---H------PLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 115 g~~---~------~~~~~~~~l~~~G~~v~~ 136 (220)
... . .++.+.+.|+++|+++..
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1 257788999999999864
No 162
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.96 E-value=2.7e-05 Score=59.85 Aligned_cols=111 Identities=21% Similarity=0.212 Sum_probs=74.5
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHH---HcCCCEEEcCCCHHHHHHhc
Q 027664 28 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSFLVSRDQDEMQAAM 104 (220)
Q Consensus 28 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~ 104 (220)
...+..+.....+++|+++|=+||| -|.+++.+|+..|++|+.++-+++....+.+ ..|.+.-+.. .....+.+.
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v-~l~d~rd~~ 135 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEV-RLQDYRDFE 135 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEE-Eeccccccc
Confidence 3344444444558999999999997 4888899999999999999999987655533 3454300000 011223333
Q ss_pred CCccEE-----EEcCCCc---ccHHHHHhccccCCEEEEeCCCC
Q 027664 105 GTMDGI-----IDTVSAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 105 ~~~d~v-----~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+.||-| |+-+|.. ..+..+.+.|+++|++.+-....
T Consensus 136 e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 136 EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 457776 4566652 34778889999999998776554
No 163
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.95 E-value=0.00025 Score=52.18 Aligned_cols=77 Identities=21% Similarity=0.269 Sum_probs=56.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----CCCE-EEcCCCHHHHHHhcCCccEEEEcCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS-FLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
.+.+++|+|+ |.+|..++..+...|.+|+++.++.++.+.+.+.+ +... ..+..+.+.+.+...++|+||.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~ 106 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA 106 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence 5789999997 99999998888888999999999887776665544 2221 2234445555555668999999987
Q ss_pred Ccc
Q 027664 116 AVH 118 (220)
Q Consensus 116 ~~~ 118 (220)
...
T Consensus 107 ~g~ 109 (194)
T cd01078 107 AGV 109 (194)
T ss_pred CCc
Confidence 664
No 164
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.95 E-value=0.0001 Score=56.54 Aligned_cols=124 Identities=24% Similarity=0.279 Sum_probs=76.3
Q ss_pred cccceEeCCCCCCccccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHH
Q 027664 4 DEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (220)
Q Consensus 4 ~~~~~~~ip~~~s~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~ 82 (220)
+...+++++++++|..+. .+.+. .+...+... +.++++||.+|+|. |..++.+++ .|+ +|++++.++...+.+
T Consensus 85 ~~~~~i~i~p~~afgtg~-h~tt~-~~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A 158 (250)
T PRK00517 85 PDEINIELDPGMAFGTGT-HPTTR-LCLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAA 158 (250)
T ss_pred CCeEEEEECCCCccCCCC-CHHHH-HHHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHH
Confidence 455677888888877654 22221 122223322 46889999999986 877776554 577 699999998776655
Q ss_pred HHHc---CCCEEEcCCCHHHHHHhcCCccEEEEcCCCc---ccHHHHHhccccCCEEEEeCCC
Q 027664 83 VERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 83 ~~~~---g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
.+.. +....+..... ...||+|+-..... ..+..+.+.|+++|+++..|..
T Consensus 159 ~~n~~~~~~~~~~~~~~~------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 159 RENAELNGVELNVYLPQG------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHcCCCceEEEccC------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 4433 22111110000 01589998655432 2356788899999999998654
No 165
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.93 E-value=0.00017 Score=55.90 Aligned_cols=97 Identities=16% Similarity=0.283 Sum_probs=72.7
Q ss_pred ccccchhhhhhhHHHhhcCCCCCCEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHH
Q 027664 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (220)
Q Consensus 21 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 99 (220)
...||+.......+....---.|++++|+|.|. +|.-+++++...|++|+++.+... .
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~ 194 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------D 194 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence 356777777777776665335799999999865 999999999999999998876421 1
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+.+....+|+||-++|.+..+.. +.++++-.++.+|...
T Consensus 195 l~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 195 MASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 33444578999999999865544 4578888888888754
No 166
>PRK06182 short chain dehydrogenase; Validated
Probab=97.93 E-value=0.00022 Score=55.25 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=53.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHh-------cCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~-------~~~~d~v~d 112 (220)
++++++|.|+ |++|..+++.+...|.+|++++++.++...+. ..+...+ .|..+.+.+.+. .+++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4678999997 99999999988888999999999877655442 3344322 465665544332 237999999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9985
No 167
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.91 E-value=0.00013 Score=59.81 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=58.5
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
-.+.+++|+|+|.+|.+++..+...|+ +++++.++.++.+.+...++...++. .+.+.+....+|+||.|++.+..
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~---~~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY---LSELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec---HHHHHHHhccCCEEEECcCCCCe
Confidence 467899999999999999999999997 89999999888777877776222222 23334445679999999998754
No 168
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.88 E-value=0.00029 Score=50.67 Aligned_cols=96 Identities=21% Similarity=0.253 Sum_probs=66.9
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCC-CeEEEEeCCccchHH---HHHHcCCC--EEEcCCCHHHHHHhcCCccEEEEc
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSE---AVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDT 113 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g-~~vi~~~~~~~~~~~---~~~~~g~~--~~~~~~~~~~~~~~~~~~d~v~d~ 113 (220)
+++|+.++=+||| .|..+++++.... .+|+++++++++.+. .+++||.+ .++....++.+.+.. .+|.+|--
T Consensus 32 ~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG 109 (187)
T COG2242 32 PRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG 109 (187)
T ss_pred CCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence 7899988888986 3777788885543 499999999876443 44567765 334444455554333 79999854
Q ss_pred CCC--cccHHHHHhccccCCEEEEeC
Q 027664 114 VSA--VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 114 ~g~--~~~~~~~~~~l~~~G~~v~~g 137 (220)
-|. +..++.++..|+++|++|.-.
T Consensus 110 Gg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 110 GGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred CCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 432 235788999999999998754
No 169
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.85 E-value=0.00012 Score=59.79 Aligned_cols=92 Identities=18% Similarity=0.250 Sum_probs=64.4
Q ss_pred EEEEccchhHHHHHHHHHHCC-C-eEEEEeCCccchHHHHHHc-C--C-CEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 46 VGVVGLGGLGHVAVKFAKAMG-V-KVTVISTSPSKKSEAVERL-G--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 46 vlI~G~g~~G~~~~~la~~~g-~-~vi~~~~~~~~~~~~~~~~-g--~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
|+|+|+|.+|..+++.+...+ . +|++.+++.++.+++.+.+ + . ...+|..+.+.+.++..+.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 688999999999998877665 4 8999999998877776542 2 2 3335666777788888889999999997644
Q ss_pred HHHHHhccccCCEEEEeC
Q 027664 120 LMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g 137 (220)
...+-.|+..+-.++...
T Consensus 81 ~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDTS 98 (386)
T ss_dssp HHHHHHHHHHT-EEEESS
T ss_pred HHHHHHHHHhCCCeeccc
Confidence 555666777788888843
No 170
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.85 E-value=0.00026 Score=50.02 Aligned_cols=105 Identities=22% Similarity=0.272 Sum_probs=67.6
Q ss_pred hHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCC-CeEEEEeCCccchHHHHHHcCCCE-EEcCCCHHHHHHhcCCccE
Q 027664 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 32 ~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~d~ 109 (220)
.++.....-..+.+++|+|+|.+|...++.+...| .+|++++++.++.+.+.+.++... .....+ ..+..+++|+
T Consensus 8 ~a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 84 (155)
T cd01065 8 RALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADL 84 (155)
T ss_pred HHHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCE
Confidence 34444432145788999999999999998888886 589999998877777766666421 011112 2222458999
Q ss_pred EEEcCCCccc----HHHHHhccccCCEEEEeCCC
Q 027664 110 IIDTVSAVHP----LMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 110 v~d~~g~~~~----~~~~~~~l~~~G~~v~~g~~ 139 (220)
|+.|++.... .......++++..++.++..
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9999987632 11112345666667766543
No 171
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.85 E-value=0.00018 Score=58.30 Aligned_cols=96 Identities=27% Similarity=0.426 Sum_probs=70.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
-.+.++||+|+|-+|..++..+...|. +|++..++.++-+++++++|+..+ ..+.+......+|+||-|+|.+..
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~----~l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV----ALEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee----cHHHHHHhhhhCCEEEEecCCCcc
Confidence 467899999999999999999999997 899999999999999999995433 334455556689999999998753
Q ss_pred H---HHHHhccccC-C-EEEEeCCCC
Q 027664 120 L---MPLIGLLKSQ-G-KLVLLGAPE 140 (220)
Q Consensus 120 ~---~~~~~~l~~~-G-~~v~~g~~~ 140 (220)
+ ...-..+... . -++.++.+.
T Consensus 252 ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 252 IITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred ccCHHHHHHHHhcccCeEEEEecCCC
Confidence 2 2233333332 2 355666544
No 172
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00038 Score=53.59 Aligned_cols=75 Identities=17% Similarity=0.253 Sum_probs=55.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC--E-EEcCCCHHHHHHh-------cCCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--S-FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~--~-~~~~~~~~~~~~~-------~~~~d~v 110 (220)
.+++++|.|+ |++|..+++.+...|++|++++++.++.+++.+.++.. . ..|..+++.+.++ .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999997 99999999988888999999999887666666665532 1 2355555443332 2478999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
+.++|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999874
No 173
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.84 E-value=0.00028 Score=58.85 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc--cchHHHHHHcCCCE-EEcCCCHHHHHHh-------cCCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~--~~~~~~~~~~g~~~-~~~~~~~~~~~~~-------~~~~d~v 110 (220)
+++++||.|+ |++|..+++.+...|++|++++++. ++...+.+.++... ..|..+.+.++++ .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999997 9999999998888999999888743 23344444555432 3466665544332 1368999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
|+++|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
No 174
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.83 E-value=0.00034 Score=51.30 Aligned_cols=106 Identities=18% Similarity=0.210 Sum_probs=73.9
Q ss_pred CCCEEEEEcc--chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC-CEEEcCCCHHHHH-------HhcC-CccEE
Q 027664 42 PGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQ-------AAMG-TMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~--g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~-------~~~~-~~d~v 110 (220)
..+.|||.|+ |++|.+++.-...-|+.|+++.++-++..++..++|. ..-+|.++++.+. +..+ ..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 4577999985 8999999988888899999999999988888777885 3445666655433 3233 68999
Q ss_pred EEcCCCccc------------------------HHHHH--hccccCCEEEEeCCCCCCCCCCc
Q 027664 111 IDTVSAVHP------------------------LMPLI--GLLKSQGKLVLLGAPEKPLELPA 147 (220)
Q Consensus 111 ~d~~g~~~~------------------------~~~~~--~~l~~~G~~v~~g~~~~~~~~~~ 147 (220)
++-+|.+=. +.+++ .+.+..|+||.+|...+-.++++
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf 148 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF 148 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch
Confidence 987775300 11111 23467799999988765444443
No 175
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00042 Score=53.91 Aligned_cols=74 Identities=15% Similarity=0.248 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHh-------c-CCccEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-------M-GTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~-------~-~~~d~v~ 111 (220)
.+++++|.|+ |++|..+++.+...|.+|++++++.++...+. ..+.+.+ .|..+.+.+++. . +.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999997 99999999988888999999999887666553 3454433 455565433221 1 3689999
Q ss_pred EcCCC
Q 027664 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
+++|.
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 99864
No 176
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.81 E-value=0.00027 Score=55.38 Aligned_cols=76 Identities=14% Similarity=0.318 Sum_probs=52.2
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCc---cchHHHHHHcCC---C---EEEcCCCHHHHHHhcCCccEE
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---SKKSEAVERLGA---D---SFLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~---~~~~~~~~~~g~---~---~~~~~~~~~~~~~~~~~~d~v 110 (220)
..+++++|.|+|++|.+++..+...|+ +|+++.++. ++.+++.+.+.. . ...+..+.+.+.+....+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 357899999999999999888888899 599999886 455555444421 1 123333333444444578999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
++|++-
T Consensus 204 INaTp~ 209 (289)
T PRK12548 204 VNATLV 209 (289)
T ss_pred EEeCCC
Confidence 999853
No 177
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00018 Score=56.49 Aligned_cols=75 Identities=24% Similarity=0.349 Sum_probs=56.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC--CEE---EcCCCHHHHHHh-------cCCcc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DSF---LVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~~---~~~~~~~~~~~~-------~~~~d 108 (220)
.++++||.|+ |++|..+++.+...|++|++++++.++.+.+.+.++. +.. .|..+.+.+.+. .+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999997 9999999999988999999999998877777666652 211 455665443332 24799
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++++++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999985
No 178
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.80 E-value=9.5e-05 Score=57.67 Aligned_cols=76 Identities=26% Similarity=0.262 Sum_probs=54.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCC-EEEcCCCHHHHHHhcCCccEEEEcCCCc
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 117 (220)
.+++++|+|+|+.|.+++..+...|+ +|+++.++.++.+.+++.++.. .+......+.+......+|+||+|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57899999999999999998889998 8999999988887777666431 1111111122223335799999998764
No 179
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.80 E-value=0.00028 Score=56.25 Aligned_cols=101 Identities=19% Similarity=0.263 Sum_probs=70.1
Q ss_pred CCCCEEEEEccchhHHHHHHHH-HHCCC-eEEEEeCCccchHHHHHHc----CCCEEEcCCCHHHHHHhcCCccEEEEcC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la-~~~g~-~vi~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~d~v~d~~ 114 (220)
+..+++.|+|+|..|...+..+ ...++ +|.+..+++++.+.+.+.+ +.+.. ...+ .++.....|+|+.|+
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~---~~~~~~~aDiVi~aT 200 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS---ADEAIEEADIIVTVT 200 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC---HHHHHhcCCEEEEcc
Confidence 5668899999999998777544 45687 8888888888877776544 33311 1222 233345799999999
Q ss_pred CCcccHHHHHhccccCCEEEEeCCCCC-CCCCCc
Q 027664 115 SAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPA 147 (220)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~ 147 (220)
+....+- . ..+++|-++..+|.... ..+++.
T Consensus 201 ~s~~p~i-~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 201 NAKTPVF-S-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred CCCCcch-H-HhcCCCcEEEecCCCCcccccCCH
Confidence 8875433 3 88899999999987643 244454
No 180
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00021 Score=54.31 Aligned_cols=75 Identities=21% Similarity=0.401 Sum_probs=56.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHhc---CCccEEEEcCCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAM---GTMDGIIDTVSA 116 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~---~~~d~v~d~~g~ 116 (220)
.+++++|.|+ |.+|..+++.+...|.+|++++++.++.+++.+..+...+ .|..+.+.+.+.. +++|++|+++|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 5688999997 8999999999988999999999987766666555555333 4556655444433 369999999985
No 181
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.80 E-value=0.00023 Score=54.93 Aligned_cols=107 Identities=18% Similarity=0.334 Sum_probs=71.6
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHH---HcC-CC-EE---EcCCCHHHHHHh-------c
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLG-AD-SF---LVSRDQDEMQAA-------M 104 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~---~~g-~~-~~---~~~~~~~~~~~~-------~ 104 (220)
-.|+.|+|.|| +++|..++.-.-..|++++.+++...+++...+ +.+ .+ .. .|-.+.+.++++ .
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 36789999998 899999998888889999999988877665533 233 23 11 244555444332 2
Q ss_pred CCccEEEEcCCCcc-------------------------cHHHHHhccccC--CEEEEeCCCCCCCCCCc
Q 027664 105 GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQ--GKLVLLGAPEKPLELPA 147 (220)
Q Consensus 105 ~~~d~v~d~~g~~~-------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~ 147 (220)
+++|+.++-+|-.. ....++..|++. |+|+.++...+....+.
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 48999998877531 124455666543 99999988776544443
No 182
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00024 Score=54.44 Aligned_cols=75 Identities=21% Similarity=0.269 Sum_probs=55.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE-EEcCCCHHHHHHh-------cCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~-------~~~~d~v~d 112 (220)
.|++++|.|+ |++|..+++.+...|++|++++++..+.+...+.++... ..|..+++.+++. .+++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999997 999999999888889999999988766555555555432 2455565444332 237899999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9874
No 183
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00069 Score=52.28 Aligned_cols=75 Identities=15% Similarity=0.224 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----CCC---EEEcCCCHHHHHHhc------CCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD---SFLVSRDQDEMQAAM------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~------~~~ 107 (220)
.++++||.|+ +++|..+++.+...|++|++++++.++.+.+.+.+ +.+ ...|..+++.++++. +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999997 89999999988889999999999877665554433 321 223555554333321 369
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++++++|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999875
No 184
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.78 E-value=0.00016 Score=56.01 Aligned_cols=87 Identities=17% Similarity=0.310 Sum_probs=58.4
Q ss_pred hhhHHHhhc--CCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHhcC
Q 027664 30 VYSPLRFYG--LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMG 105 (220)
Q Consensus 30 a~~~l~~~~--~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 105 (220)
.+.+|.... ...++++++|+|+|+.+.+++..++..|+ +++++.++.++.+++++.++.... +............
T Consensus 111 ~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~- 189 (283)
T COG0169 111 FLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE- 189 (283)
T ss_pred HHHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-
Confidence 344455432 22458999999999999999999999997 899999999988888777663211 0111111111110
Q ss_pred CccEEEEcCCCc
Q 027664 106 TMDGIIDTVSAV 117 (220)
Q Consensus 106 ~~d~v~d~~g~~ 117 (220)
.+|++++|++-.
T Consensus 190 ~~dliINaTp~G 201 (283)
T COG0169 190 EADLLINATPVG 201 (283)
T ss_pred ccCEEEECCCCC
Confidence 589999998753
No 185
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.77 E-value=0.00026 Score=55.19 Aligned_cols=95 Identities=21% Similarity=0.249 Sum_probs=62.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
..+++++|+|+|++|.+++..+...|+ +|+++.++.++.+.+++.++....+.. +. ...+....+|+|++|++....
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~~~~DivInaTp~g~~ 198 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEELADFDLIINATSAGMS 198 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhccccCCEEEECCcCCCC
Confidence 457889999999999999999999995 999999998887777666542210111 00 112223579999999976421
Q ss_pred H-----HHHHhccccCCEEEEeC
Q 027664 120 L-----MPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 120 ~-----~~~~~~l~~~G~~v~~g 137 (220)
- ......+.++..++.+-
T Consensus 199 ~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 199 GELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred CCCCCCCCCHHHcCCCCEEEEee
Confidence 0 11234556666666553
No 186
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00026 Score=56.58 Aligned_cols=75 Identities=21% Similarity=0.332 Sum_probs=55.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCE---EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |++|..+++.+...|++|+++++++++.+++.+. .|.+. ..|..+.+.++++ .+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5689999997 9999999999988999999999988776655443 34432 2355665544433 2479
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999984
No 187
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00079 Score=53.92 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=54.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCE---EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.++ .|.+. ..|..+.+.+++. .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999997 9999999998888899999999987765554333 34322 2355565544432 2479
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|+++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999985
No 188
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.72 E-value=0.00046 Score=51.20 Aligned_cols=115 Identities=16% Similarity=0.081 Sum_probs=71.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc-chHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 120 (220)
.|.+|||+|+|.+|..-++.+...|++|++++.... ....+.+......+ ..+.. .....++++||-|++.+..-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~--~~~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWL--ARCFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEE--eCCCC--HHHhCCcEEEEECCCCHHHH
Confidence 468999999999999999999999999998887653 23333222222221 11111 12235899999999987544
Q ss_pred HHHHhccccCCEEEEeCCCCCCCCCCchhhhcC-CeEEEEE
Q 027664 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG-RKIVGGS 160 (220)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~ 160 (220)
.......+..|.+|..........|..+..+.+ .+++.-+
T Consensus 84 ~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred HHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEE
Confidence 556666677788886654443334443333333 4555443
No 189
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00059 Score=51.95 Aligned_cols=76 Identities=21% Similarity=0.278 Sum_probs=53.4
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHhc-------CC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAAM-------GT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~-------~~ 106 (220)
.++++++|.|+ |++|..++..+...|++|+++.+++++.....+.+ +.. ...|..+.+.++++. ++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999997 99999999988888999999988876555443332 221 123555554443321 47
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 190
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.70 E-value=0.00018 Score=56.17 Aligned_cols=72 Identities=21% Similarity=0.407 Sum_probs=52.4
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCC----CEEEcCCCHHHHHHhcCCccEEEEcCC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
..+++|+|+|+|+.|.+++..+...|+ +|+++.++.++.+.+.+.++. ..+.... .+.+....+|+|++|++
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP 201 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence 356889999999999999999999998 899999998887777665531 1222111 12223357999999964
No 191
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00035 Score=53.66 Aligned_cols=77 Identities=19% Similarity=0.316 Sum_probs=55.0
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC----EEEcCCCHHHHHHh-------cCCcc
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD----SFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~-------~~~~d 108 (220)
.++.++||.|+ |.+|..+++.+...|.+|+.+.++.+..+.+.+..+-. ...|..+++.+.+. .+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 57789999997 99999999988889999999999876655554433211 22355555443322 24799
Q ss_pred EEEEcCCCc
Q 027664 109 GIIDTVSAV 117 (220)
Q Consensus 109 ~v~d~~g~~ 117 (220)
+||.++|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999998854
No 192
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.69 E-value=0.00075 Score=52.52 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=63.4
Q ss_pred cchhhhhhhHHHhhcCCCCCCEEEEEccch-hHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHH
Q 027664 24 LCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA 102 (220)
Q Consensus 24 ~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 102 (220)
+++-......++..+.--.|++++|+|.|. +|..+++++...|++|+++.+... . +.+
T Consensus 140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~------------------L~~ 198 (283)
T PRK14192 140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---N------------------LPE 198 (283)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---h------------------HHH
Confidence 333333333444444335789999999976 999999999999998777765321 1 122
Q ss_pred hcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 103 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 103 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
....+|+++.|+|.+..+. .+.++++-.++.+|...
T Consensus 199 ~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 199 LVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred HhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 2247899999998775333 35688888888887543
No 193
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00037 Score=53.25 Aligned_cols=75 Identities=21% Similarity=0.296 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC-CEEEcCCCHHHHHHhcCCccEEEEcCCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
.+++++|.|+ |++|..+++.+...|++|++++++............. ....|..+.+.+.+..+++|++++++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4689999997 8999999998888999999998876222111111111 1234556666666666689999999975
No 194
>PLN00203 glutamyl-tRNA reductase
Probab=97.67 E-value=0.00064 Score=57.31 Aligned_cols=98 Identities=24% Similarity=0.354 Sum_probs=65.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~- 119 (220)
.+.+|+|+|+|.+|.++++.+...|+ +|+++.++.++.+.+...++...+ .....+...+....+|+||.|++.+..
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 36889999999999999999989998 899999998888887766642111 112222333444689999999977543
Q ss_pred -HHHHHhcccc----CC---EEEEeCCCC
Q 027664 120 -LMPLIGLLKS----QG---KLVLLGAPE 140 (220)
Q Consensus 120 -~~~~~~~l~~----~G---~~v~~g~~~ 140 (220)
....+..+.+ .| .++.++.+.
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 2333433322 12 466776654
No 195
>PRK06484 short chain dehydrogenase; Validated
Probab=97.67 E-value=0.00099 Score=56.58 Aligned_cols=99 Identities=20% Similarity=0.316 Sum_probs=69.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC---EEEcCCCHHHHHHh-------cCCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~-------~~~~d~v 110 (220)
.++++||.|+ +++|..+++.+...|++|++++++.++.+.+.+.++.. ...|..+++.++++ .+.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999997 99999999988889999999999887777776656542 22455555443332 2469999
Q ss_pred EEcCCCcc---c-----------------------HHHHHhccccCCEEEEeCCCC
Q 027664 111 IDTVSAVH---P-----------------------LMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 111 ~d~~g~~~---~-----------------------~~~~~~~l~~~G~~v~~g~~~ 140 (220)
|+++|... . .+.++..++++|+++.++...
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99987421 0 122344556679999887654
No 196
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00067 Score=51.67 Aligned_cols=97 Identities=21% Similarity=0.295 Sum_probs=61.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc-chHHHHHH---cCCC---EEEcCCCHHHHHHhc-------CC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVER---LGAD---SFLVSRDQDEMQAAM-------GT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~-~~~~~~~~---~g~~---~~~~~~~~~~~~~~~-------~~ 106 (220)
.+++++|.|+ |.+|..++..+...|.+|+++.++.+ +.+.+.+. .+.+ ...|..+.+.+.+.. ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999997 99999999888888999998887653 23333222 2322 123555555443221 36
Q ss_pred ccEEEEcCCCcc-------------------cHHHHHhccccCCEEEEeCC
Q 027664 107 MDGIIDTVSAVH-------------------PLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 107 ~d~v~d~~g~~~-------------------~~~~~~~~l~~~G~~v~~g~ 138 (220)
+|+++.++|... .++.+...+.++|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 899998886421 12344455556688887765
No 197
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.66 E-value=0.00048 Score=45.19 Aligned_cols=90 Identities=22% Similarity=0.241 Sum_probs=61.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 121 (220)
.|.+|||+|+|.+|..-++.+...|++|++++... ... + +.-.... .. .++...++++||-+.+.+..-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~-~--~~i~~~~-~~---~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFS-E--GLIQLIR-RE---FEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHH-H--TSCEEEE-SS----GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhh-h--hHHHHHh-hh---HHHHHhhheEEEecCCCHHHHH
Confidence 57899999999999999999999999999999886 222 1 2111211 11 1233468999999999876555
Q ss_pred HHHhccccCCEEEEeCCCCC
Q 027664 122 PLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 122 ~~~~~l~~~G~~v~~g~~~~ 141 (220)
......+..|.++.......
T Consensus 76 ~i~~~a~~~~i~vn~~D~p~ 95 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDPE 95 (103)
T ss_dssp HHHHHHHHTTSEEEETT-CC
T ss_pred HHHHHHhhCCEEEEECCCcC
Confidence 66667777899998866543
No 198
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.64 E-value=0.00021 Score=53.07 Aligned_cols=98 Identities=31% Similarity=0.314 Sum_probs=62.1
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCccchHHHHH---HcCCCE-EEcCCCHHHHHHhcCCccEEE
Q 027664 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVE---RLGADS-FLVSRDQDEMQAAMGTMDGII 111 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~la~~~g~--~vi~~~~~~~~~~~~~~---~~g~~~-~~~~~~~~~~~~~~~~~d~v~ 111 (220)
..+++|++||-+|+| .|..++-+++..|. +|+.+...++-.+.+.+ .++.+. .+...+-..--.....||.++
T Consensus 68 L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~I~ 146 (209)
T PF01135_consen 68 LDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDRII 146 (209)
T ss_dssp TTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEEEE
T ss_pred HhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCEEE
Confidence 348999999999987 48888888888775 68888888764444333 345432 222222111111123799999
Q ss_pred EcCCCcccHHHHHhccccCCEEEEe
Q 027664 112 DTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (220)
-+.+-+......++.|+.||+++..
T Consensus 147 v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 147 VTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp ESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred EeeccchHHHHHHHhcCCCcEEEEE
Confidence 8887776678899999999999974
No 199
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00029 Score=55.33 Aligned_cols=75 Identities=21% Similarity=0.351 Sum_probs=53.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |++|..+++.+...|.+|++++++.++.+++.+.+ +.+. ..|..+.+.+.+. .+.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999888888999999999987665554432 3221 1344454433322 2479
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++++++|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999875
No 200
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.64 E-value=0.0013 Score=44.36 Aligned_cols=97 Identities=19% Similarity=0.278 Sum_probs=64.1
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCC-CeEEEEeCCccchHHHHH---HcCCC--EEEcCCCHHHHHHhcCCccEEEEc
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVE---RLGAD--SFLVSRDQDEMQAAMGTMDGIIDT 113 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g-~~vi~~~~~~~~~~~~~~---~~g~~--~~~~~~~~~~~~~~~~~~d~v~d~ 113 (220)
+.++++++-+|+|. |..+..+++..+ .+++.++.++...+.+.+ .++.+ .++..+-........+.+|+|+-.
T Consensus 17 ~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~ 95 (124)
T TIGR02469 17 LRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIG 95 (124)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEEC
Confidence 56788999999976 888889998875 599999998876555432 33432 122111111122223479999865
Q ss_pred CCCc---ccHHHHHhccccCCEEEEeC
Q 027664 114 VSAV---HPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 114 ~g~~---~~~~~~~~~l~~~G~~v~~g 137 (220)
.+.. ..++.+.+.|+++|+++...
T Consensus 96 ~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 96 GSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 4332 24778899999999998753
No 201
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.64 E-value=6.9e-05 Score=58.04 Aligned_cols=97 Identities=30% Similarity=0.302 Sum_probs=58.2
Q ss_pred hhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHH---HcCCC--EEEcCCCHHHHHHhcCCccEE
Q 027664 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGAD--SFLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 36 ~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~--~~~~~~~~~~~~~~~~~~d~v 110 (220)
....+++|++||-+|+| -|..+..+++..|++|++++.+++..+.+.+ ..|.. ..+...+ .+++...||.|
T Consensus 56 ~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D---~~~~~~~fD~I 131 (273)
T PF02353_consen 56 EKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQD---YRDLPGKFDRI 131 (273)
T ss_dssp TTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES----GGG---S-SEE
T ss_pred HHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee---ccccCCCCCEE
Confidence 33458999999999998 5788888999899999999999887665532 34431 1122222 22333488987
Q ss_pred E-----EcCCCc---ccHHHHHhccccCCEEEEe
Q 027664 111 I-----DTVSAV---HPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 111 ~-----d~~g~~---~~~~~~~~~l~~~G~~v~~ 136 (220)
+ +.+|.. ..++.+.+.|+|||++++-
T Consensus 132 vSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 132 VSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp EEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred EEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 5 455543 2367888999999999754
No 202
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00053 Score=53.15 Aligned_cols=72 Identities=19% Similarity=0.231 Sum_probs=52.5
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHh-------cCCccEEEEcC
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-------MGTMDGIIDTV 114 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~-------~~~~d~v~d~~ 114 (220)
+++||.|+ |++|..+++.+...|++|++++++.++...+ ...+...+ .|..+.+.+.+. .+++|++++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899997 9999999998888899999999887665544 33454333 466665544332 13799999999
Q ss_pred CC
Q 027664 115 SA 116 (220)
Q Consensus 115 g~ 116 (220)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 84
No 203
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.63 E-value=0.00077 Score=53.19 Aligned_cols=107 Identities=16% Similarity=0.154 Sum_probs=73.5
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HCCC-eEEEEeCCccchHHHHHHcCCC--EEEcCCCHHHHHHhcCCccEEEEcCCC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~-~~g~-~vi~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
....+++|+|+|..|.+.++.+. ..+. +|.+..++.++.+.+++.++.. .+. . +.+++...++|+|+.|++.
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEEEEccCC
Confidence 56788999999999999988775 4676 8999999988888877776421 111 1 1233344689999999987
Q ss_pred cccHHHHHhccccCCEEEEeCCCCC-CCCCCchhhhcCC
Q 027664 117 VHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGR 154 (220)
Q Consensus 117 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (220)
...+-.. .+++|-++..+|.... ..+++.. ++.+.
T Consensus 199 ~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~-~~~~a 234 (304)
T PRK07340 199 RTPVYPE--AARAGRLVVAVGAFTPDMAELAPR-TVRGS 234 (304)
T ss_pred CCceeCc--cCCCCCEEEecCCCCCCcccCCHH-HHhhC
Confidence 6543333 3788889999987653 3455543 34443
No 204
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.63 E-value=0.0021 Score=51.02 Aligned_cols=95 Identities=25% Similarity=0.252 Sum_probs=64.0
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HCCC-eEEEEeCCccchHHHHHHcC---CCEEEcCCCHHHHHHhcCCccEEEEcCC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERLG---ADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~-~~g~-~vi~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
....+++|+|+|.+|...+..+. ..+. +|.+..++.++.+.+++.+. ..... ..+ ..+...+.|+|+.|++
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~~~---~~~av~~aDIVi~aT~ 198 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-VTD---LEAAVRQADIISCATL 198 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-eCC---HHHHHhcCCEEEEeeC
Confidence 56789999999999999986444 3665 89999999888888877653 22111 112 3333457999999888
Q ss_pred CcccHHHHHhccccCCEEEEeCCCC
Q 027664 116 AVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 116 ~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
....+- -.+.++++-.+..+|...
T Consensus 199 s~~pvl-~~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 199 STEPLV-RGEWLKPGTHLDLVGNFT 222 (314)
T ss_pred CCCCEe-cHHHcCCCCEEEeeCCCC
Confidence 653311 124677777777776543
No 205
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00049 Score=53.29 Aligned_cols=75 Identities=21% Similarity=0.352 Sum_probs=54.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC-CCE-EEcCCCHHHHHH-------hcCCccEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADS-FLVSRDQDEMQA-------AMGTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~~-~~~~~~~~~~~~-------~~~~~d~v~ 111 (220)
.+.++||.|+ |++|..+++.+...|++|+++++++++...+.+.++ ... ..|..+.+.+.+ ..+++|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3678999997 999999998888889999999998877666655555 322 235555543322 224799999
Q ss_pred EcCCC
Q 027664 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
+++|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99884
No 206
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.61 E-value=0.00051 Score=52.89 Aligned_cols=75 Identities=23% Similarity=0.276 Sum_probs=54.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC---EEEcCCCHHHHHHh-------cCCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~-------~~~~d~v 110 (220)
+++++||.|+ |++|..+++.+...|++|+++++++++.+.+.+.++.. ...|..+.+.+++. .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999997 89999999988888999999999887776665555431 12344444333222 2479999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
++++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999884
No 207
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.60 E-value=0.0011 Score=52.65 Aligned_cols=97 Identities=24% Similarity=0.209 Sum_probs=66.1
Q ss_pred CCCCCCEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCccchHHHHH---HcCCCEEE-cCCCHHHHHHhcCCccEEEE
Q 027664 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVE---RLGADSFL-VSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~la~~~g~--~vi~~~~~~~~~~~~~~---~~g~~~~~-~~~~~~~~~~~~~~~d~v~d 112 (220)
.++++++||.+|+| .|..++.+++..+. .|++++.+++..+.+.+ .+|.+.+. ...+........+.||+|+.
T Consensus 77 ~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii~ 155 (322)
T PRK13943 77 GLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFV 155 (322)
T ss_pred CCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEEE
Confidence 36889999999998 59999999998764 68999988865444332 35554322 11221111011136999999
Q ss_pred cCCCcccHHHHHhccccCCEEEEe
Q 027664 113 TVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 113 ~~g~~~~~~~~~~~l~~~G~~v~~ 136 (220)
+.+.........+.++++|+++..
T Consensus 156 ~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 156 TVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCchHHhHHHHHHhcCCCCEEEEE
Confidence 888665567788999999998764
No 208
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00046 Score=53.17 Aligned_cols=75 Identities=19% Similarity=0.257 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC--E-EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--S-FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~--~-~~~~~~~~~~~~~-------~~~~ 107 (220)
+++++||.|+ |++|..+++.+...|++|++++++.++.+++.+.+ +.. . ..|..+.+.+.+. .+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999997 89999999988889999999999876655544332 221 1 2455555444322 2479
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999874
No 209
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.59 E-value=0.001 Score=52.13 Aligned_cols=98 Identities=26% Similarity=0.231 Sum_probs=61.6
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHc---CCCEEEcCCCHHHHHHhcCCccEEEEcCC
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
..++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+.+.. +....+.....+......++||+|+....
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANIL 234 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEecC
Confidence 36789999999987 877776665 566 8999999987665554332 22111110001111112247999986443
Q ss_pred Cc---ccHHHHHhccccCCEEEEeCCC
Q 027664 116 AV---HPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 116 ~~---~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
.. ..+..+.+.|+++|.++..|..
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 32 2356678999999999988754
No 210
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.59 E-value=0.00079 Score=53.71 Aligned_cols=95 Identities=17% Similarity=0.253 Sum_probs=65.1
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HCCC-eEEEEeCCccchHHHHHHc----CCCEEEcCCCHHHHHHhcCCccEEEEcC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~-~~g~-~vi~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~d~v~d~~ 114 (220)
+...+++|+|+|..|.+.+..+. ..+. +|.+..++.++.+.+++.+ |.+ +.... .+++.....|+|+.|+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~---~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT---DPRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC---CHHHHhccCCEEEEec
Confidence 45678999999999988887665 5786 8999999988877776655 332 21122 2334445899999999
Q ss_pred CCcccHHHHHhccccCCEEEEeCCCC
Q 027664 115 SAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+....+ ...+.++++-.+..+|...
T Consensus 203 ~s~~p~-i~~~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 203 PSETPI-LHAEWLEPGQHVTAMGSDA 227 (326)
T ss_pred CCCCcE-ecHHHcCCCcEEEeeCCCC
Confidence 875422 1123577777877777543
No 211
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.58 E-value=0.00073 Score=52.67 Aligned_cols=75 Identities=20% Similarity=0.331 Sum_probs=51.7
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcC----CCEEEcCCCHHHHHHhcCCccEEEEcCC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
..+++++|+|+|+.|.+++..+...|+ +++++.++.++.+.+++.+. ...+ ...+..........+|+|++|++
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecCHhHHHHHHhhcCEEEEcCC
Confidence 357899999999999999988888998 88899999888777766543 1111 11111111222346899999986
Q ss_pred C
Q 027664 116 A 116 (220)
Q Consensus 116 ~ 116 (220)
-
T Consensus 204 ~ 204 (283)
T PRK14027 204 M 204 (283)
T ss_pred C
Confidence 4
No 212
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.58 E-value=0.0017 Score=49.70 Aligned_cols=75 Identities=21% Similarity=0.317 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |.+|..+++.+...|.+|+++++++++.+.+.+.+ +.. ...|..+.+.+.+. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999888888999999999887665554433 322 22355555444332 2379
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999874
No 213
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00077 Score=51.32 Aligned_cols=75 Identities=21% Similarity=0.336 Sum_probs=54.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE---EcCCCHHHHHH-------hcCCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQA-------AMGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~-------~~~~~d~v 110 (220)
++++++|.|+ |.+|..+++.+...|++|++++++.++.....++++.... .|..+.+.+.. ..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999997 9999999998888999999999887666666556664321 24444333222 22479999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
|.++|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999874
No 214
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.57 E-value=0.0017 Score=47.96 Aligned_cols=80 Identities=21% Similarity=0.154 Sum_probs=56.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhc-CCccEEEEcCCCccc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~d~v~d~~g~~~~ 119 (220)
-.|++++|.|.|.+|..+++.+...|++|++++.+.++.+++.+.+++.. ++.. ++. ..+|+++-|+.+...
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~------~l~~~~~Dv~vp~A~~~~I 98 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE------EIYSVDADVFAPCALGGVI 98 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch------hhccccCCEEEeccccccc
Confidence 46789999999999999999999999999999888877777766666542 2321 111 257888866654433
Q ss_pred HHHHHhcc
Q 027664 120 LMPLIGLL 127 (220)
Q Consensus 120 ~~~~~~~l 127 (220)
-...+..+
T Consensus 99 ~~~~~~~l 106 (200)
T cd01075 99 NDDTIPQL 106 (200)
T ss_pred CHHHHHHc
Confidence 34444445
No 215
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.57 E-value=0.0011 Score=51.82 Aligned_cols=86 Identities=15% Similarity=0.249 Sum_probs=53.1
Q ss_pred hhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCcc---chHHHHHHcCCC-----EEEcCCCHHHHH
Q 027664 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---KKSEAVERLGAD-----SFLVSRDQDEMQ 101 (220)
Q Consensus 31 ~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~---~~~~~~~~~g~~-----~~~~~~~~~~~~ 101 (220)
..++...+.-..+++++|+|+|+.+.+++..+...|+ +++++.++.+ +.+.+++.++.. .+....+.+.+.
T Consensus 112 ~~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~ 191 (288)
T PRK12749 112 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA 191 (288)
T ss_pred HHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhh
Confidence 3445433322367899999999889887776777898 8999999853 555565555321 111111111122
Q ss_pred HhcCCccEEEEcCCC
Q 027664 102 AAMGTMDGIIDTVSA 116 (220)
Q Consensus 102 ~~~~~~d~v~d~~g~ 116 (220)
+....+|+|++|+.-
T Consensus 192 ~~~~~aDivINaTp~ 206 (288)
T PRK12749 192 EALASADILTNGTKV 206 (288)
T ss_pred hhcccCCEEEECCCC
Confidence 333479999999864
No 216
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.56 E-value=0.00022 Score=51.29 Aligned_cols=97 Identities=22% Similarity=0.279 Sum_probs=64.7
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEc-CC-----------------C--HHHHHH
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV-SR-----------------D--QDEMQA 102 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~-~~-----------------~--~~~~~~ 102 (220)
..+|+|.|+|.+|+.++.+++.+|+++++.+...++..+. +.++...+.. +. . ...+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999999999998766655 4555533322 10 1 112333
Q ss_pred hcCCccEEEEcC--CCcc----cHHHHHhccccCCEEEEeCCCC
Q 027664 103 AMGTMDGIIDTV--SAVH----PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 103 ~~~~~d~v~d~~--g~~~----~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
....+|+++-+. ++.. ..++.++.|+++..++.+....
T Consensus 99 ~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 99 FIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 334789998543 2211 2367788999999999887644
No 217
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.56 E-value=0.002 Score=51.16 Aligned_cols=136 Identities=24% Similarity=0.299 Sum_probs=88.8
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcC-CCccc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTV-SAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~-g~~~~ 119 (220)
-.|+++-|+|-|.+|+++++.++.+|.+|+..+++.. .+..+.+++.++ + +.++....|++.-.+ .++++
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~----~---l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV----D---LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec----c---HHHHHHhCCEEEEeCCCChHH
Confidence 3589999999999999999999999999999998874 333344555443 2 334444678876544 44432
Q ss_pred H----HHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccce-EEeecccH--
Q 027664 120 L----MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYV-- 192 (220)
Q Consensus 120 ~----~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~-~~~~~~~~-- 192 (220)
. ...+..|++++.+|.++-.. .-+-+.+++++++|++.-.- ++|..|..
T Consensus 215 ~hLin~~~l~~mk~ga~lVNtaRG~------------------------~VDe~ALi~AL~~g~i~gaglDV~e~Ep~~~ 270 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTARGG------------------------LVDEQALIDALKSGKIAGAGLDVFENEPALF 270 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECCCcc------------------------ccCHHHHHHHHHhCCcceEEeeecCCCCCCC
Confidence 2 35678899999999886422 12456777777888777543 66665554
Q ss_pred HHHHHHHHcCCCceeEEEEe
Q 027664 193 NTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 193 ~~a~~~~~~~~~~gk~vv~~ 212 (220)
+..+..+.+. .++++.+
T Consensus 271 d~~l~~l~~~---~~vvltP 287 (324)
T COG1052 271 DHPLLRLDNF---PNVVLTP 287 (324)
T ss_pred ChhHhhccCC---CCEEEcc
Confidence 2344333322 3455554
No 218
>PRK07574 formate dehydrogenase; Provisional
Probab=97.56 E-value=0.0031 Score=51.28 Aligned_cols=90 Identities=20% Similarity=0.259 Sum_probs=64.4
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~- 120 (220)
.|++|.|+|.|.+|..+++.++.+|.+|++.+++.... ...+.+++... .+ ++++....|+|+-++......
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~-~~~~~~g~~~~---~~---l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPE-EVEQELGLTYH---VS---FDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCch-hhHhhcCceec---CC---HHHHhhcCCEEEEcCCCCHHHH
Confidence 56789999999999999999999999999999875332 22234454321 12 445556789999888753222
Q ss_pred ----HHHHhccccCCEEEEeCC
Q 027664 121 ----MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 121 ----~~~~~~l~~~G~~v~~g~ 138 (220)
...+..|+++..++.++-
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCC
Confidence 346778888888888764
No 219
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00054 Score=52.65 Aligned_cols=75 Identities=20% Similarity=0.277 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-----CCC---EEEcCCCHHHHHHh-------cC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~-------~~ 105 (220)
.+++++|.|+ |++|..+++.+...|++|+.+++++++.++..+.+ +.. ...|..+++.+.++ .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4688999997 99999999988889999999999877666554443 211 12345554433322 24
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
++|+++.++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999884
No 220
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00058 Score=52.62 Aligned_cols=75 Identities=21% Similarity=0.298 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----C-CC---EEEcCCCHHHHHHh-------cC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----G-AD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g-~~---~~~~~~~~~~~~~~-------~~ 105 (220)
.+++++|.|+ +++|..+++.+...|++|+.++++.++.+...+.+ + .. ...|..+.+.++++ .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 5789999997 89999999988889999999999877655543332 1 11 12355565444332 24
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
++|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999984
No 221
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.55 E-value=0.00032 Score=51.98 Aligned_cols=34 Identities=29% Similarity=0.581 Sum_probs=30.1
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
.+.+|+|+|+|++|..+++.+...|+ ++++++..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999 88888866
No 222
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.54 E-value=0.00083 Score=51.71 Aligned_cols=75 Identities=27% Similarity=0.285 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC---EEEcCCCHHHHH----Hh---cCCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQ----AA---MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~----~~---~~~~d~v 110 (220)
++++++|.|+ |++|..+++.+...|++|++++++.++.+++....+.. ...|..+.+.+. +. .+.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999997 89999999988889999999998877666654443321 113445543332 22 2478999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
+++.|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999873
No 223
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.54 E-value=0.00089 Score=54.86 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=54.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC--C-CEEEcCCCHHHHHHhcCCccEEEEcCCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
.+++++|.|+ |++|..+++.+...|++|+++++++++........+ . ....|..+.+.+.+..+++|++|.++|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 5789999997 999999998888889999999887665433322211 1 1224566666676666789999998874
No 224
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.002 Score=49.89 Aligned_cols=72 Identities=22% Similarity=0.309 Sum_probs=50.2
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCC----EEEcCCCHHHHHHh-------cCCccE
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD----SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~----~~~~~~~~~~~~~~-------~~~~d~ 109 (220)
+++|.|+ |++|..+++.+...|++|+++.+++++.+...++ .+.. ...|..+.+.+.+. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6899997 9999999998888899999998887665544333 2322 22455555433322 236999
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
+++++|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999985
No 225
>PRK06196 oxidoreductase; Provisional
Probab=97.53 E-value=0.00077 Score=53.45 Aligned_cols=75 Identities=23% Similarity=0.303 Sum_probs=54.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC-CCE-EEcCCCHHHHHHhc-------CCccEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADS-FLVSRDQDEMQAAM-------GTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~~-------~~~d~v~ 111 (220)
.+++++|.|+ |++|..++..+...|++|++++++.++.++..+.+. ... ..|..+.+.++++. +++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5689999997 999999998888889999999998776665544432 221 23555555443322 3799999
Q ss_pred EcCCC
Q 027664 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
+++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99874
No 226
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.52 E-value=0.00051 Score=59.82 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=56.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc--------------------chHHHHHHcCCCEEEcCCCH-H-H
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAVERLGADSFLVSRDQ-D-E 99 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~--------------------~~~~~~~~~g~~~~~~~~~~-~-~ 99 (220)
.+++|+|+|+|+.|+.++..++..|.+|+++...+. +..+..+.+|++..++..-. + .
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 388 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDIT 388 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcCC
Confidence 489999999999999999999999999998887653 12234467787766554321 1 2
Q ss_pred HHHhcCCccEEEEcCCCc
Q 027664 100 MQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~g~~ 117 (220)
+..+..++|.||.++|..
T Consensus 389 ~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 389 FSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred HHHHHhcCCEEEEeCCCC
Confidence 334445899999999975
No 227
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.51 E-value=0.0026 Score=48.00 Aligned_cols=102 Identities=15% Similarity=0.225 Sum_probs=63.5
Q ss_pred hhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCe---EEEEeCC----ccch-------HHHHHHcCCCEEEcCCC
Q 027664 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK---VTVISTS----PSKK-------SEAVERLGADSFLVSRD 96 (220)
Q Consensus 31 ~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~---vi~~~~~----~~~~-------~~~~~~~g~~~~~~~~~ 96 (220)
..+++..+.--.+.+++|+|+|+.|..++..+...|++ +++++++ .++. +.+.+.++... .+
T Consensus 13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~--- 88 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG--- 88 (226)
T ss_pred HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---
Confidence 34455544224678999999999999999888888985 8888887 3332 23334433211 11
Q ss_pred HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeC
Q 027664 97 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 97 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 137 (220)
. .+.+...++|++|++++....-...++.+.+...++.+.
T Consensus 89 ~-~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 G-TLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred C-CHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 1 122233469999999984322245667777776666554
No 228
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.50 E-value=0.00075 Score=51.41 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC--C---CEEEcCCCHHHHHHh-------cCCcc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--A---DSFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g--~---~~~~~~~~~~~~~~~-------~~~~d 108 (220)
.++++||.|+ |.+|..+++.+...|.+|++++++.++.+.+.+.+. . -...|..+.+.++.. .+.+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999997 999999998888889999999999876665544443 1 112344554444332 23789
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++|.++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999875
No 229
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.001 Score=51.74 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC---EEEcCCCHHHHHHhc-------CCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAAM-------GTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~-------~~~d~v 110 (220)
.++++||.|+ |++|..+++.+...|++|++++++.++.+.+.+..+.. ...|..+.+.+.+.. +++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999997 99999999988888999999999887665554433321 123555554433321 368999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
++++|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999886
No 230
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.50 E-value=0.0011 Score=55.83 Aligned_cols=72 Identities=18% Similarity=0.245 Sum_probs=53.5
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCC-HHHHHHhcCCccEEEEcCCCc
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~ 117 (220)
+.++++|+|+|.|.+|++++++++..|++|++.+..+.+...+ +++|+..+ .... .+.+ ..+|+|+.+.|-+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~-~~~~~~~~l----~~~D~VV~SpGi~ 81 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATV-STSDAVQQI----ADYALVVTSPGFR 81 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEE-cCcchHhHh----hcCCEEEECCCCC
Confidence 4578999999999999999999999999999988776555443 55777443 2222 2222 3679999998875
No 231
>PLN03139 formate dehydrogenase; Provisional
Probab=97.49 E-value=0.003 Score=51.34 Aligned_cols=90 Identities=17% Similarity=0.176 Sum_probs=63.5
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~- 120 (220)
.|++|.|+|.|.+|..+++.++.+|.+|++.+++....+ ..+..|+..+ . .+.++....|+|+-++......
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~-~~~~~g~~~~---~---~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPE-LEKETGAKFE---E---DLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchh-hHhhcCceec---C---CHHHHHhhCCEEEEeCCCCHHHH
Confidence 678999999999999999999999999999887653322 2234554321 1 2444445689998888753211
Q ss_pred ----HHHHhccccCCEEEEeCC
Q 027664 121 ----MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 121 ----~~~~~~l~~~G~~v~~g~ 138 (220)
...+..|+++..++.++-
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCC
Confidence 346778888888888764
No 232
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00056 Score=52.78 Aligned_cols=76 Identities=29% Similarity=0.348 Sum_probs=52.5
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~ 106 (220)
.+++++||.|+ |++|..+++.+...|++|+.++++.++.....+.+ +.. ..+|..+++.+.+. .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999997 99999999988889999999998876554443332 221 12355555444332 136
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++|.+.|.
T Consensus 87 iD~vi~~ag~ 96 (264)
T PRK07576 87 IDVLVSGAAG 96 (264)
T ss_pred CCEEEECCCC
Confidence 8999998863
No 233
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00073 Score=51.73 Aligned_cols=75 Identities=12% Similarity=0.215 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |++|..+++.+...|++|+++.++.++.+.+.+.+ +.+ ...|..+.+.++++ .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999997 99999999988889999999999877665554433 221 12355555443332 2479
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 234
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.49 E-value=0.0023 Score=50.70 Aligned_cols=88 Identities=20% Similarity=0.310 Sum_probs=64.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~- 120 (220)
.|++|.|+|.|.+|..+++.++.+|.+|++.+++.++.. +..... ....+.++....|+|+.++......
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 678999999999999999999999999999987653221 222221 1223555666889999998754321
Q ss_pred ----HHHHhccccCCEEEEeCC
Q 027664 121 ----MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 121 ----~~~~~~l~~~G~~v~~g~ 138 (220)
...++.|+++..++.+|-
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCC
Confidence 346788999998888864
No 235
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00074 Score=51.73 Aligned_cols=76 Identities=25% Similarity=0.300 Sum_probs=53.7
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CC---CEEEcCCCHHHHHHh-------cCC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~---~~~~~~~~~~~~~~~-------~~~ 106 (220)
..+++++|.|+ |.+|..+++.+...|++|+++.++.++.+.+...+ +. ....|..+.+.+++. .+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45789999997 99999999988888999999999887665554332 21 122344454433332 237
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 236
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00075 Score=51.01 Aligned_cols=75 Identities=24% Similarity=0.304 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC----CCE-EEcCCCHHHHHHh-------cCCcc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADS-FLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~-------~~~~d 108 (220)
.+.+++|.|+ |.+|..+++.+...|++|+++++++++..++.+.+. ... ..|..+.+.+.+. .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999997 999999998887789999999988776655555443 111 1244444433222 13799
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999875
No 237
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.47 E-value=0.00092 Score=51.88 Aligned_cols=103 Identities=21% Similarity=0.128 Sum_probs=64.9
Q ss_pred hhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC---CEEEcCCCHHHHHHhcCCc
Q 027664 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSFLVSRDQDEMQAAMGTM 107 (220)
Q Consensus 31 ~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~ 107 (220)
..++........+++++|+|+|++|.+++..+...|.+|+++.++.++.+.+.+.++. ...+.. +. .....+
T Consensus 105 ~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~--~~~~~~ 179 (270)
T TIGR00507 105 VSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM---DE--LPLHRV 179 (270)
T ss_pred HHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech---hh--hcccCc
Confidence 3444443323457899999999999999988888899999999988777666655432 122211 11 112368
Q ss_pred cEEEEcCCCcc--cHH---HHHhccccCCEEEEeCC
Q 027664 108 DGIIDTVSAVH--PLM---PLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 108 d~v~d~~g~~~--~~~---~~~~~l~~~G~~v~~g~ 138 (220)
|++++|++... ... .....++++..++.+..
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 99999998641 111 11344666666666643
No 238
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.47 E-value=0.00038 Score=51.51 Aligned_cols=114 Identities=13% Similarity=0.042 Sum_probs=66.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccc-hHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 120 (220)
.|.+|||+|+|.+|...+..+...|++|+++.+...+ ...+.+. +. ..+..... ......++|+||-|++.++ .
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~~--~~~~l~~adlViaaT~d~e-l 83 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GK-IRWKQKEF--EPSDIVDAFLVIAATNDPR-V 83 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CC-EEEEecCC--ChhhcCCceEEEEcCCCHH-H
Confidence 5789999999999999998888899999988764321 2222221 21 11211111 1122347899999999885 4
Q ss_pred HHHHhccccCCEEEEeCCCCCCCCCCchhhhcC-CeEEEEE
Q 027664 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG-RKIVGGS 160 (220)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~ 160 (220)
+..+...+..+.++..........|..+..+.+ .+++.-+
T Consensus 84 N~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 84 NEQVKEDLPENALFNVITDAESGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred HHHHHHHHHhCCcEEECCCCccCeEEEeeEEEcCCeEEEEE
Confidence 444443334456666654443344444433333 4554443
No 239
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.47 E-value=0.00058 Score=57.21 Aligned_cols=77 Identities=22% Similarity=0.382 Sum_probs=54.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc--------------------chHHHHHHcCCCEEEcCCCH-H-H
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAVERLGADSFLVSRDQ-D-E 99 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~--------------------~~~~~~~~~g~~~~~~~~~~-~-~ 99 (220)
.+++|+|+|+|+.|+.++..++..|.+|++....+. +..+..+++|++..++.... + .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 219 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDIS 219 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCccC
Confidence 578999999999999999999999999988876542 12233467887765543221 1 2
Q ss_pred HHHhcCCccEEEEcCCCcc
Q 027664 100 MQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~g~~~ 118 (220)
+.....++|.||.++|...
T Consensus 220 ~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 220 LDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred HHHHHhcCCEEEEEeCCCC
Confidence 2333347999999999853
No 240
>PRK05717 oxidoreductase; Validated
Probab=97.47 E-value=0.0012 Score=50.58 Aligned_cols=76 Identities=20% Similarity=0.312 Sum_probs=53.2
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC---EEEcCCCHHHHHH----hc---CCccE
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQA----AM---GTMDG 109 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~----~~---~~~d~ 109 (220)
..|++++|.|+ |.+|..++..+...|++|++++++..+.....+.++.. ...|..+.+.+.+ .. +.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35788999997 99999999888888999999988766555554555432 1234555443322 22 36899
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
+|.++|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9999874
No 241
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.001 Score=50.94 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=53.0
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHH---HcCCC---EEEcCCCHHHHHHhcC-CccEEEEcC
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGAD---SFLVSRDQDEMQAAMG-TMDGIIDTV 114 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~-~~d~v~d~~ 114 (220)
++++||.|+ |.+|..+++.+...|++|++++++..+...+.. ..+.. ...|..+.+.+.+... ++|++|.++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 467999997 999999999998999999999988655444322 22221 1235566666655544 899999998
Q ss_pred CC
Q 027664 115 SA 116 (220)
Q Consensus 115 g~ 116 (220)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 74
No 242
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.46 E-value=0.0011 Score=51.28 Aligned_cols=80 Identities=18% Similarity=0.268 Sum_probs=56.3
Q ss_pred hhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCC
Q 027664 28 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGT 106 (220)
Q Consensus 28 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 106 (220)
.....+++..+ ...+++++|+|+|+.+.+++..+...|+ +|+++.++.++.+.+++.++... . +... ...
T Consensus 108 ~Gf~~~L~~~~-~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~~--~~~ 178 (272)
T PRK12550 108 IAIAKLLASYQ-VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDLG--GIE 178 (272)
T ss_pred HHHHHHHHhcC-CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhcc--ccc
Confidence 33344555443 3456789999999999999998888998 79999999888777766664221 1 1110 135
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++|++-
T Consensus 179 ~dlvINaTp~ 188 (272)
T PRK12550 179 ADILVNVTPI 188 (272)
T ss_pred CCEEEECCcc
Confidence 8999999863
No 243
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.46 E-value=0.00091 Score=51.21 Aligned_cols=75 Identities=25% Similarity=0.388 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHhc-------CCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~-------~~~ 107 (220)
.++++||.|+ |.+|..+++.+...|++|+++.+++++...+.+.+ |... ..|..+.+.++++. +.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999997 99999999888888999999998876554443332 2211 13555554444332 369
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999985
No 244
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.46 E-value=0.0014 Score=50.74 Aligned_cols=95 Identities=19% Similarity=0.202 Sum_probs=71.1
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 100 (220)
..||+..+....+...+---.|++++|+|- ..+|.-++++++..|+.|+++...-. .+
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------NL 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------CH
Confidence 467777777777776653246999999997 56999999999999999988765421 13
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCC
Q 027664 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 101 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
++....+|+++.++|.+..+.. +.++++-.++.+|..
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence 3444578999999998864433 678889899898854
No 245
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.00075 Score=53.52 Aligned_cols=75 Identities=21% Similarity=0.213 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-----CCC---EEEcCCCHHHHHHh-------cC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~-------~~ 105 (220)
.|++++|.|+ +++|..+++.+...|++|+.++++.++.+++.+++ +.. ...|..+.+.++++ .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4689999997 89999999888888999999999887665554433 111 12355565444332 23
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
.+|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 69999998874
No 246
>PRK06194 hypothetical protein; Provisional
Probab=97.46 E-value=0.00089 Score=52.22 Aligned_cols=75 Identities=20% Similarity=0.343 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHhc-------CCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~-------~~~ 107 (220)
.+.++||.|+ |++|..+++.+...|++|++++++.++.++..+.+ +... ..|..+.+.+.++. +++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999888888999999998876555544333 3221 23455554443332 368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999986
No 247
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0015 Score=50.25 Aligned_cols=77 Identities=19% Similarity=0.322 Sum_probs=53.6
Q ss_pred CCCCCEEEEEcc-c-hhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH----cCCCEE----EcCCCHHHHHHh------
Q 027664 40 DKPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADSF----LVSRDQDEMQAA------ 103 (220)
Q Consensus 40 ~~~~~~vlI~G~-g-~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~----~g~~~~----~~~~~~~~~~~~------ 103 (220)
+..+++++|.|+ | ++|..+++.+...|++|++++++.++.+...+. ++...+ .|..+.+.+.++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 456789999996 6 799999999999999999988877655444332 342222 355555433322
Q ss_pred -cCCccEEEEcCCC
Q 027664 104 -MGTMDGIIDTVSA 116 (220)
Q Consensus 104 -~~~~d~v~d~~g~ 116 (220)
.+.+|++|+++|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 2478999999984
No 248
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.45 E-value=0.0014 Score=49.64 Aligned_cols=74 Identities=16% Similarity=0.119 Sum_probs=51.1
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE-EEcCCCHHHHHH----h---cCCccEEEEc
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQA----A---MGTMDGIIDT 113 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~----~---~~~~d~v~d~ 113 (220)
++++||.|+ |++|..+++.+...|++|+++++++++.....+..+... ..|..+.+.+++ . .+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 468999997 899999999888889999999988654433334455422 234445443322 2 2369999999
Q ss_pred CCC
Q 027664 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
+|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 249
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.44 E-value=0.0026 Score=47.54 Aligned_cols=98 Identities=30% Similarity=0.301 Sum_probs=63.8
Q ss_pred hcCCCCCCEEEEEccchhHHHHHHHHHHCC--CeEEEEeCCccchHHHHHH---cCCCE--EEcCCCHHHHHHhcCCccE
Q 027664 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVER---LGADS--FLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 37 ~~~~~~~~~vlI~G~g~~G~~~~~la~~~g--~~vi~~~~~~~~~~~~~~~---~g~~~--~~~~~~~~~~~~~~~~~d~ 109 (220)
...++++++||-+|+|. |..+..+++..+ .+|+.++.+++..+.+.+. +|.+. ++..+-.+.. ...+.||.
T Consensus 71 ~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD~ 148 (212)
T PRK13942 71 LLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYDR 148 (212)
T ss_pred HcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcCE
Confidence 33478999999999874 777778887765 4899999998765544333 34321 1211111111 01137999
Q ss_pred EEEcCCCcccHHHHHhccccCCEEEEe
Q 027664 110 IIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 110 v~d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (220)
|+-............+.|++||+++..
T Consensus 149 I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 149 IYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred EEECCCcccchHHHHHhhCCCcEEEEE
Confidence 875544454677889999999998875
No 250
>PRK06484 short chain dehydrogenase; Validated
Probab=97.44 E-value=0.001 Score=56.47 Aligned_cols=76 Identities=22% Similarity=0.377 Sum_probs=57.4
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC---EEEcCCCHHHHHHh-------cCCccE
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~-------~~~~d~ 109 (220)
.+++++||.|+ +++|..+++.+...|++|+.++++.++.+.+.++++.. ...|..+++.++++ .+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 35789999997 89999999988889999999999888777776666643 23455565444332 247999
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
+++++|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999874
No 251
>PLN02253 xanthoxin dehydrogenase
Probab=97.43 E-value=0.0013 Score=51.14 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC----C-EEEcCCCHHHHHHhc-------CCcc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----D-SFLVSRDQDEMQAAM-------GTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~----~-~~~~~~~~~~~~~~~-------~~~d 108 (220)
.++++||.|+ |++|..+++.+...|++|++++++.+..+.+.+.++. . ...|..+.+.++++. +++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4688999997 9999999988888899999998876655555444431 1 124555554443322 3799
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++++++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999874
No 252
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.43 E-value=0.0023 Score=49.66 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=70.4
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 100 (220)
..||+.......++..+---.|++++|+|. +.+|.-++.++...|++|+++..... .+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------DL 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------CH
Confidence 467776666666666553357999999997 55699999999999999987543211 13
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.+.....|+++-++|.+..+.. +.++++..++.+|...
T Consensus 196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~ 233 (285)
T PRK14189 196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence 3444578999999998865443 7899999999998643
No 253
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.00087 Score=51.33 Aligned_cols=76 Identities=21% Similarity=0.308 Sum_probs=53.5
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~ 106 (220)
..+++++|.|+ |++|..+++.+...|.+|+++++++++.+.+.+.+ +.. ...|..+.+.++.. .+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 45788999997 99999999988889999999998876655554433 221 22455554433322 246
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 8999999874
No 254
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.42 E-value=0.0014 Score=49.89 Aligned_cols=75 Identities=24% Similarity=0.449 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCC---EEEcCCCHHHHHH----h---cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQA----A---MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~----~---~~~~ 107 (220)
+++++||.|+ |++|..+++.+...|++|+.++++.++.....+. .+.. ...|..+.+.+++ . .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999997 9999999998888899999999887655444332 2332 2234444433322 2 1368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999873
No 255
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.001 Score=50.20 Aligned_cols=75 Identities=23% Similarity=0.388 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCEE-EcCCCHHHHHHh-------cCCccE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSF-LVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~-------~~~~d~ 109 (220)
+++++||.|+ |.+|..+++.+...|++|+.++++.++.....+.+ +...+ .|..+.+.+.+. .+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4789999997 99999999888888999999999776543332222 33222 344444333222 237999
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
++++.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
No 256
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0034 Score=48.72 Aligned_cols=74 Identities=19% Similarity=0.243 Sum_probs=52.2
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE---EEcCCCHHHHHHh-------cCCccEEE
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGII 111 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~-------~~~~d~v~ 111 (220)
++++||.|+ |.+|..+++.+...|.+|+.++++.++...+.+.++... -.|..+.+.+.+. .+++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999997 999999998888889999999998776665544443211 2344454433222 24789999
Q ss_pred EcCCC
Q 027664 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
.++|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99985
No 257
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=97.41 E-value=0.0012 Score=49.34 Aligned_cols=97 Identities=19% Similarity=0.159 Sum_probs=63.2
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEE--------------c--CCCHHHHH-Hh
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL--------------V--SRDQDEMQ-AA 103 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~--------------~--~~~~~~~~-~~ 103 (220)
.++.+||+.|+| .|.-++.+|. .|.+|++++.++...+.+.++.+..... + ..+..... ..
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 577899999998 4888888875 6999999999998777654444432110 0 00000000 11
Q ss_pred cCCccEEEEcCCC--------cccHHHHHhccccCCEEEEeCCC
Q 027664 104 MGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 104 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
.+.||.++|+..- ...++.+.++|++||+++..+..
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 2358999997542 12467888999999987766553
No 258
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0012 Score=50.61 Aligned_cols=75 Identities=23% Similarity=0.317 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |++|..+++.+...|++|+.+++++++.+.+.+++ +.+. ..|..+.+.++++ .+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 89999999888888999999999877666554433 3221 1244554433322 2379
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999874
No 259
>PRK06128 oxidoreductase; Provisional
Probab=97.40 E-value=0.0048 Score=48.60 Aligned_cols=99 Identities=13% Similarity=0.190 Sum_probs=62.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc--hHH---HHHHcCCCEE---EcCCCHHHHHHh-------cC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSE---AVERLGADSF---LVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~--~~~---~~~~~g~~~~---~~~~~~~~~~~~-------~~ 105 (220)
.++++||.|+ |++|..++..+...|++|+++..+.+. .+. ..+..+.... .|..+.+.++++ .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4689999997 999999998888889999887665321 122 2223343221 344554433322 24
Q ss_pred CccEEEEcCCCcc--------------------------cHHHHHhccccCCEEEEeCCCC
Q 027664 106 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 106 ~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
++|++|.++|... ..+.+...+.++|+++.++...
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 7999999987420 1123344556778998876643
No 260
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0011 Score=51.57 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |++|..++..+...|++|++++++.++.++..+.+ +.+. ..|..+.+.+.++ .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999997 99999999988889999999998876665554433 3221 2355555444332 2368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|+++|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999874
No 261
>PRK09242 tropinone reductase; Provisional
Probab=97.40 E-value=0.0011 Score=50.85 Aligned_cols=75 Identities=13% Similarity=0.250 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-----CCCE---EEcCCCHHHHHHh-------cC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~-------~~ 105 (220)
.+++++|.|+ |++|..+++.+...|++|++++++.++.+++.+++ +.+. ..|..+++.++++ .+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999997 99999999988889999999999877665554433 2111 1344454433222 24
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 262
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.39 E-value=0.00081 Score=53.79 Aligned_cols=77 Identities=22% Similarity=0.337 Sum_probs=50.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCcc---------------------chHHH---HHHcCCCEEE----
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---------------------KKSEA---VERLGADSFL---- 92 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~---------------------~~~~~---~~~~g~~~~~---- 92 (220)
.+.+|+|+|+|++|..++..+...|. ++++++...- |.+.+ ++++..+..+
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 45789999999999999999999999 7877776531 11111 1222221111
Q ss_pred cCCCHHHHHHhcCCccEEEEcCCCcc
Q 027664 93 VSRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 93 ~~~~~~~~~~~~~~~d~v~d~~g~~~ 118 (220)
..-..+.+.++..++|+|+||+.+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 103 TDVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred ccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 11123445566678999999998764
No 263
>PRK09186 flagellin modification protein A; Provisional
Probab=97.39 E-value=0.0012 Score=50.54 Aligned_cols=74 Identities=23% Similarity=0.305 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----CC---CE-EEcCCCHHHHHHhc-------C
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GA---DS-FLVSRDQDEMQAAM-------G 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~---~~-~~~~~~~~~~~~~~-------~ 105 (220)
.++++||.|+ |.+|..++..+...|++|+.+.++.++.+++.+.+ +. .. ..|..+.+.+.++. +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999997 89999999988889999999998877665554443 21 12 23555555443322 3
Q ss_pred CccEEEEcCC
Q 027664 106 TMDGIIDTVS 115 (220)
Q Consensus 106 ~~d~v~d~~g 115 (220)
++|+++.+++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999985
No 264
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.38 E-value=0.001 Score=52.89 Aligned_cols=74 Identities=20% Similarity=0.250 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC-----CE-EEcCCCHHHHHHhc-------CCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-----DS-FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-----~~-~~~~~~~~~~~~~~-------~~~ 107 (220)
.+++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.++. .. ..|..+.+.++++. +++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4678999997 9999999988888899999999987766665555421 11 23555544433321 259
Q ss_pred cEEEEcCC
Q 027664 108 DGIIDTVS 115 (220)
Q Consensus 108 d~v~d~~g 115 (220)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 265
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.38 E-value=0.0025 Score=49.81 Aligned_cols=96 Identities=18% Similarity=0.141 Sum_probs=71.6
Q ss_pred ccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHH
Q 027664 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (220)
Q Consensus 21 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 99 (220)
..+||+.......+...+---.|++|.|+|. +.+|.-++.++...|++|++..+....
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~--------------------- 195 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD--------------------- 195 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------
Confidence 3567777777777766653357999999997 599999999999999999988655321
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCC
Q 027664 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
+++.....|+|+-++|.+..+...+ +++|..++.+|..
T Consensus 196 l~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 196 AKALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 3333446799999999886555443 8888888888754
No 266
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0014 Score=49.22 Aligned_cols=71 Identities=23% Similarity=0.272 Sum_probs=52.3
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHhc----CCccEEEEcCC
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAM----GTMDGIIDTVS 115 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~----~~~d~v~d~~g 115 (220)
+++|.|+ |++|..+++.+...|.+|+.+.++.++.+.+.+.++...+ .|..+.+.++++. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4889987 9999999998888899999999988776666555554332 4555655544432 36899999875
No 267
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.37 E-value=0.0025 Score=49.44 Aligned_cols=96 Identities=16% Similarity=0.189 Sum_probs=69.8
Q ss_pred ccccchhhhhhhHHHhhcCCCCCCEEEEEccc-hhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHH
Q 027664 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (220)
Q Consensus 21 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g-~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 99 (220)
..+||+..+....+...+---.|++|+|+|.| .+|.-++.++...|+.|++...... .
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~ 193 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D 193 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence 34677766666666665532479999999975 9999999999999999887643221 1
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCC
Q 027664 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
+.+....+|+++-++|.+..+. -+.+++|..++.+|..
T Consensus 194 l~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 194 LSFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence 2334457899999999886443 3467888899998864
No 268
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0012 Score=50.44 Aligned_cols=74 Identities=20% Similarity=0.313 Sum_probs=51.5
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC-EE--EcCCCHHHHHHh-------cCCcc
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SF--LVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~-------~~~~d 108 (220)
|+++||.|+ |++|..+++.+...|.+|++++++.++.+.+.+.+ +.. .. .|..+++.++++ .+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999997 89999999988889999999998876655543332 221 12 245555444332 24789
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++++++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
No 269
>PLN02928 oxidoreductase family protein
Probab=97.37 E-value=0.0032 Score=50.63 Aligned_cols=95 Identities=19% Similarity=0.235 Sum_probs=63.6
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC-----CCEEEc-CCCHHHHHHhcCCccEEEEcCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----ADSFLV-SRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g-----~~~~~~-~~~~~~~~~~~~~~d~v~d~~g 115 (220)
.|+++.|+|.|.+|..+++.++.+|.+|++.+++..+... ..++ .....+ ......+.++....|+|+-+++
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 5789999999999999999999999999999886432111 1111 001110 0112234555567899999886
Q ss_pred Ccc----c-HHHHHhccccCCEEEEeCC
Q 027664 116 AVH----P-LMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 116 ~~~----~-~~~~~~~l~~~G~~v~~g~ 138 (220)
... . -...++.|+++..+|.++-
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 422 1 2467789999999988864
No 270
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.37 E-value=0.0034 Score=44.54 Aligned_cols=114 Identities=14% Similarity=0.033 Sum_probs=64.9
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 120 (220)
-.|.+|+|+|+|.+|..-++.+...|++|+++. ++..+++ +.++.-. +.....+ .....++|+|+-++++++ .
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l-~~l~~i~-~~~~~~~--~~dl~~a~lViaaT~d~e-~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEM-KELPYIT-WKQKTFS--NDDIKDAHLIYAATNQHA-V 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHH-HhccCcE-EEecccC--hhcCCCceEEEECCCCHH-H
Confidence 367899999999999999998888999998884 3333444 3344211 2211111 112347899999998875 5
Q ss_pred HHHHhccccCCEEEEeCCCCCCCCCCchhh-hcCCeEEEEEe
Q 027664 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPL-LTGRKIVGGSL 161 (220)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~ 161 (220)
+..+...++.+.++.........++..+.. -...+.+.-+.
T Consensus 84 N~~i~~~a~~~~~vn~~d~~~~~~f~~pa~v~~~~l~iaisT 125 (157)
T PRK06719 84 NMMVKQAAHDFQWVNVVSDGTESSFHTPGVIRNDEYVVTIST 125 (157)
T ss_pred HHHHHHHHHHCCcEEECCCCCcCcEEeeeEEEECCeEEEEEC
Confidence 554444443344444433222233333322 33345554433
No 271
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.36 E-value=0.0021 Score=51.22 Aligned_cols=94 Identities=19% Similarity=0.253 Sum_probs=64.7
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHH-HCCC-eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCc
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~-~~g~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 117 (220)
-.+++|+|+|+ |.+|..+++.+. ..|+ +++.+.++.++...+.++++...+ ..+.+.....|+|+.+++.+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence 36789999998 899999987775 4576 888888887777666555542111 12344455899999999875
Q ss_pred ccHHHHHhccccCCEEEEeCCCC
Q 027664 118 HPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 118 ~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
..+..-...++++-.++.++.+.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 44322224557777888887764
No 272
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.36 E-value=0.0022 Score=41.26 Aligned_cols=86 Identities=21% Similarity=0.358 Sum_probs=58.3
Q ss_pred EEEEEccchhHHHHHHHHHHCC---CeEEEE-eCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027664 45 HVGVVGLGGLGHVAVKFAKAMG---VKVTVI-STSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~g---~~vi~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 120 (220)
++.|+|+|.+|.+.+.-+...| .+|+.+ .+++++.+++.++++..... .+..+.+ +..|+||-|+.... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~----~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEEAA----QEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHHHH----HHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHHhh----ccCCEEEEEECHHH-H
Confidence 4678899999999999888888 688855 89998888888888864332 1222222 25799999998764 5
Q ss_pred HHHHhc---cccCCEEEEe
Q 027664 121 MPLIGL---LKSQGKLVLL 136 (220)
Q Consensus 121 ~~~~~~---l~~~G~~v~~ 136 (220)
...+.. ..++..++.+
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 444443 4455555554
No 273
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.36 E-value=0.0032 Score=46.76 Aligned_cols=96 Identities=28% Similarity=0.301 Sum_probs=62.9
Q ss_pred CCCCCCEEEEEccchhHHHHHHHHHHCC--CeEEEEeCCccchHHHHH---HcCCC---EEEcCCCHHHHHHhcCCccEE
Q 027664 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVE---RLGAD---SFLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~la~~~g--~~vi~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~~~~d~v 110 (220)
.++++++||-+|+|. |..+..+++..+ .+|+.++.+++..+.+.+ ..+.. .++..+-.+.+. ..+.||.|
T Consensus 69 ~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD~I 146 (205)
T PRK13944 69 EPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFDAI 146 (205)
T ss_pred CCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCccEE
Confidence 368899999999874 777777777764 489999999875554433 33432 222211111111 12479999
Q ss_pred EEcCCCcccHHHHHhccccCCEEEEe
Q 027664 111 IDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 111 ~d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (220)
+-+.......+.+.+.|++||+++..
T Consensus 147 i~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 147 IVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EEccCcchhhHHHHHhcCcCcEEEEE
Confidence 86655444567888999999999864
No 274
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0013 Score=50.53 Aligned_cols=75 Identities=20% Similarity=0.323 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----CCC---EEEcCCCHHHHHHhc---CCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD---SFLVSRDQDEMQAAM---GTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~---~~~d~v 110 (220)
.+++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.+.++. +.+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4789999997 89999999888888999999999877655543332 221 113445555444432 479999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
+.+.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999875
No 275
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.35 E-value=0.0042 Score=49.70 Aligned_cols=88 Identities=23% Similarity=0.367 Sum_probs=63.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcc---
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 118 (220)
.|++|.|+|.|.+|..+++.++.+|.+|++.+++.... .....+.. ..+ +.+.....|+|+-++....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~----~~~---l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE--AEKELGAE----YRP---LEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcCCE----ecC---HHHHHhhCCEEEEeCCCChHHh
Confidence 57899999999999999999999999999998875432 22334432 112 3344456899998887532
Q ss_pred -cH-HHHHhccccCCEEEEeCC
Q 027664 119 -PL-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~ 138 (220)
.+ ...+..|+++..++.++-
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcC
Confidence 12 356788888888888754
No 276
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.35 E-value=0.0015 Score=51.82 Aligned_cols=71 Identities=23% Similarity=0.280 Sum_probs=53.0
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEE-cCCCHHHHHHhcCCccEEEEcCCC
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
+|+|.|+ |-+|..+++.+...|.+|++++++.++...+ ...+++.+. |..+.+.+.+...++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence 6899997 9999999988888899999999886543332 334554432 445666676766789999998764
No 277
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0018 Score=48.59 Aligned_cols=72 Identities=19% Similarity=0.219 Sum_probs=50.4
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC-CC-EEEcCCCHHHHHHh----cC-CccEEEEcCC
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-AD-SFLVSRDQDEMQAA----MG-TMDGIIDTVS 115 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~----~~-~~d~v~d~~g 115 (220)
++++|.|+ |++|..+++.+...|.+|+++++++++.+.+ +.++ .. ...|..+.+.++++ .+ ++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899997 9999999988888899999999988766554 3332 22 22455555444333 22 6999999886
Q ss_pred C
Q 027664 116 A 116 (220)
Q Consensus 116 ~ 116 (220)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 4
No 278
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0013 Score=50.09 Aligned_cols=75 Identities=17% Similarity=0.287 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc--CCC--E-EEcCCCHHHHHHh-------cCCcc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GAD--S-FLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~--g~~--~-~~~~~~~~~~~~~-------~~~~d 108 (220)
++++++|.|+ |.+|..+++.+...|++|+.+.++.++.......+ +.. . ..|..+.+.+++. .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999997 99999999877778999999998876555544433 221 1 1344554444332 24799
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
+++.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999985
No 279
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.32 E-value=0.0035 Score=50.12 Aligned_cols=95 Identities=19% Similarity=0.299 Sum_probs=62.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCccchHHHHHHc----CCCEEEcCCCHHHHHHhcCCccEEEEcC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~-~g~-~vi~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~d~v~d~~ 114 (220)
+...+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+++.+ |.. +....+ +++.....|+|+.|+
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 445789999999999887776654 676 8999999988877776654 332 111222 333345789999998
Q ss_pred CCcccHHHHHhccccCCEEEEeCCCC
Q 027664 115 SAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+....+-.. ..++++-++..+|...
T Consensus 206 ~s~~p~i~~-~~l~~g~~v~~vg~d~ 230 (330)
T PRK08291 206 PSEEPILKA-EWLHPGLHVTAMGSDA 230 (330)
T ss_pred CCCCcEecH-HHcCCCceEEeeCCCC
Confidence 875432211 3467777777776543
No 280
>PRK04148 hypothetical protein; Provisional
Probab=97.32 E-value=0.007 Score=41.45 Aligned_cols=88 Identities=17% Similarity=0.139 Sum_probs=59.1
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 120 (220)
.++.+++++|.| .|..+++.+...|.+|++++.++...+.+ +..+.+.+.+.--. .-.++-+++|+++.+-..++..
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~-p~~~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFN-PNLEIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCC-CCHHHHhcCCEEEEeCCCHHHH
Confidence 456889999999 78766666668899999999999877666 55665444332111 1112334889999888887655
Q ss_pred HHHHhccccCC
Q 027664 121 MPLIGLLKSQG 131 (220)
Q Consensus 121 ~~~~~~l~~~G 131 (220)
..+++.-++-|
T Consensus 92 ~~~~~la~~~~ 102 (134)
T PRK04148 92 PFILELAKKIN 102 (134)
T ss_pred HHHHHHHHHcC
Confidence 55555554433
No 281
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0022 Score=49.17 Aligned_cols=74 Identities=20% Similarity=0.263 Sum_probs=51.9
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC----C-EEEcCCCHHHHHHh-------cCCccE
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----D-SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~----~-~~~~~~~~~~~~~~-------~~~~d~ 109 (220)
+.++||.|+ |++|..+++.+...|++|++++++.++.+.+.+.+.. . ...|..+.+.+.+. .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999997 9999999988888899999999987766655544421 1 12355554444332 235899
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
++.++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999874
No 282
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.31 E-value=0.0011 Score=49.48 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=29.6
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
...+|+|+|+|++|..+++.+...|. ++++++..
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45779999999999999999988999 78888876
No 283
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.30 E-value=0.0023 Score=49.64 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-c--hhHHHHHHHHHHCCCeEEEEeCCccc---hHHHHHHcCCCE--EEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAVERLGADS--FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g--~~G~~~~~la~~~g~~vi~~~~~~~~---~~~~~~~~g~~~--~~~~~~~~~~~~~-------~~~ 106 (220)
.++++||.|+ + ++|.++++.+...|++|+++.+++.. .+++.+.+|... ..|..+.+.++++ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999997 4 89999999888899999998776422 223333345322 2355555444332 247
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999874
No 284
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0014 Score=50.40 Aligned_cols=73 Identities=21% Similarity=0.262 Sum_probs=52.6
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC---CC-EEEcCCCHHHHHHh--------cCCccEE
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---AD-SFLVSRDQDEMQAA--------MGTMDGI 110 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~-~~~~~~~~~~~~~~--------~~~~d~v 110 (220)
+++||.|+ |.+|..+++.+...|++|++++++.++.+++.+..+ .. ...|..+.+.+.+. .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 47899997 999999998888889999999998877666655443 11 12455554433322 2468999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999985
No 285
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0019 Score=49.14 Aligned_cols=75 Identities=19% Similarity=0.305 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |.+|..+++.+...|.+|+++.++++....+.+.+ +.. ...|..+.+.+++. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 99999999888888999999998876544443322 211 22455554433322 2369
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 286
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.30 E-value=0.0071 Score=46.51 Aligned_cols=75 Identities=16% Similarity=0.270 Sum_probs=49.6
Q ss_pred CCCEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCc---cchHHHHHHc-CCC---EEEcCCCHHHHHHh-------c
Q 027664 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERL-GAD---SFLVSRDQDEMQAA-------M 104 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~la~~~g~~vi~~~~~~---~~~~~~~~~~-g~~---~~~~~~~~~~~~~~-------~ 104 (220)
.+++++|.|+ +++|.++++.+...|++|+.+.++. ++.+++.+.+ +.. ...|..+++.++++ .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 5789999996 5999999988888899999886542 3344454444 211 22355555433322 2
Q ss_pred CCccEEEEcCCC
Q 027664 105 GTMDGIIDTVSA 116 (220)
Q Consensus 105 ~~~d~v~d~~g~ 116 (220)
+++|++++++|.
T Consensus 86 g~ld~lv~nag~ 97 (257)
T PRK08594 86 GVIHGVAHCIAF 97 (257)
T ss_pred CCccEEEECccc
Confidence 469999998873
No 287
>PRK08643 acetoin reductase; Validated
Probab=97.29 E-value=0.0016 Score=49.86 Aligned_cols=74 Identities=22% Similarity=0.338 Sum_probs=51.4
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCCcc
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~~d 108 (220)
++++||.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+++.+++. .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 568999997 99999999988888999999998876655543332 221 12345554433322 24799
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999875
No 288
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.29 E-value=0.0018 Score=49.68 Aligned_cols=76 Identities=22% Similarity=0.308 Sum_probs=53.3
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~ 106 (220)
.+++++||.|+ |.+|..+++.+...|++|++++++.++.+...+.+ +.. ...|..+.+.+++. .++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35789999997 99999999888888999999999876655443322 221 22355555444322 237
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|.++.++|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 289
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.29 E-value=0.0028 Score=48.56 Aligned_cols=75 Identities=17% Similarity=0.286 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE-EEcCCCHHHHHHh-------cCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~-------~~~~d~v~d 112 (220)
.+++++|.|+ |++|..+++.+...|++|+++.++.+......+..+... ..|..+++.++++ .+++|++|.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4688999997 999999999888889999887665433222222223322 2355565444332 247999999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9875
No 290
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.29 E-value=0.0022 Score=49.18 Aligned_cols=75 Identities=20% Similarity=0.319 Sum_probs=53.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC---EEEcCCCHHHHHHh-------cCCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~-------~~~~d~v 110 (220)
.++++||.|+ |.+|..+++.+...|.+|+.++++.++.+.+.+.++.. ...|-.+.+.+.++ .+.+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 99999999988888999999999887766665555421 12244444433322 2368999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998874
No 291
>PRK08589 short chain dehydrogenase; Validated
Probab=97.29 E-value=0.0019 Score=50.13 Aligned_cols=74 Identities=16% Similarity=0.305 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CC---CEEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~---~~~~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ +++|..+++.+...|++|++++++ ++.+...+.+ +. ....|..+.+.+.++ .+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5789999997 899999998888889999999988 5544443333 32 122455554433322 2468
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++++++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 292
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.29 E-value=0.0026 Score=47.62 Aligned_cols=98 Identities=30% Similarity=0.333 Sum_probs=62.3
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCccchHHHHH---HcCCCEE-EcCCCHHHHHHhcCCccEEE
Q 027664 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVE---RLGADSF-LVSRDQDEMQAAMGTMDGII 111 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~la~~~g~--~vi~~~~~~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~~~~~d~v~ 111 (220)
..++++++||-+|+|. |..++.+++..+. +|+.++.+++..+.+.+ .+|.+.+ +...+..........||+|+
T Consensus 73 l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Ii 151 (215)
T TIGR00080 73 LELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAPYDRIY 151 (215)
T ss_pred hCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCCCCEEE
Confidence 3478999999999874 7777788887654 69999988775544433 3343211 11111111001113799987
Q ss_pred EcCCCcccHHHHHhccccCCEEEEe
Q 027664 112 DTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (220)
-..........+.+.|++||+++..
T Consensus 152 ~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 152 VTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred EcCCcccccHHHHHhcCcCcEEEEE
Confidence 5544444567888999999998865
No 293
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0021 Score=49.51 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc--C--CCE-EEcCCCHHHHHHh------cCCccE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--G--ADS-FLVSRDQDEMQAA------MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~--g--~~~-~~~~~~~~~~~~~------~~~~d~ 109 (220)
++.++||.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ + ... ..|..+.+.+.++ .+.+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999997 99999999888888999999999877666554443 1 111 1344444433322 247899
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999875
No 294
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0023 Score=48.28 Aligned_cols=74 Identities=11% Similarity=0.126 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cC-C
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MG-T 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~-~ 106 (220)
.+++++|.|+ +++|..++.-+...|++|+.+.++.++.+++.+.+ +.+ ...|..+.+.++++ .+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999997 89999999888888999999999887766554332 432 12344454433322 24 6
Q ss_pred ccEEEEcCC
Q 027664 107 MDGIIDTVS 115 (220)
Q Consensus 107 ~d~v~d~~g 115 (220)
+|++|.+.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
No 295
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.28 E-value=0.0018 Score=48.90 Aligned_cols=71 Identities=23% Similarity=0.401 Sum_probs=54.2
Q ss_pred EEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc-hHHHHHHcCCCEE-EcCCCHHHHHHhcCCccEEEEcCCC
Q 027664 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
|+|.|+ |.+|..+++.+...+.+|.+..++... .....+..|++.+ .|+.+.+.+.+...|+|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689998 999999999888888899999998742 2223356788654 3556677787878899999999984
No 296
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.27 E-value=0.0091 Score=43.95 Aligned_cols=100 Identities=16% Similarity=0.130 Sum_probs=60.2
Q ss_pred hcCCCCCCEEEEEccchhHHHHHHHHHHC-CCeEEEEeCCccchHHHHH---HcCCCE--EEcCCCHHHHHHhcCCccEE
Q 027664 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVE---RLGADS--FLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 37 ~~~~~~~~~vlI~G~g~~G~~~~~la~~~-g~~vi~~~~~~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~~~~~d~v 110 (220)
...++++++||-.|+|. |..++.+++.. +.+|++++.+++..+.+.+ .++.+. ++..+..+.+..+...+|.+
T Consensus 35 ~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v 113 (196)
T PRK07402 35 QLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRV 113 (196)
T ss_pred hcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEE
Confidence 33467889988888763 66666667654 4699999999876555433 344432 22222222232333344554
Q ss_pred EEcCCC--cccHHHHHhccccCCEEEEeC
Q 027664 111 IDTVSA--VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 111 ~d~~g~--~~~~~~~~~~l~~~G~~v~~g 137 (220)
+-..+. ...++.+.+.|++||+++...
T Consensus 114 ~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 114 CIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred EEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 332232 235678888999999998874
No 297
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.27 E-value=0.0033 Score=49.77 Aligned_cols=91 Identities=18% Similarity=0.243 Sum_probs=60.5
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCC--eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc-
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~--~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~- 119 (220)
..+|.|+|+|.+|...+..++..|. +|++.++++++.+.+ +..|....... + ..+.....|+||.|++....
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~-~---~~~~~~~aDvViiavp~~~~~ 80 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTT-S---AAEAVKGADLVILCVPVGASG 80 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecC-C---HHHHhcCCCEEEECCCHHHHH
Confidence 3579999999999999998888884 888898887766555 45664221111 1 12233578999999986531
Q ss_pred --HHHHHhccccCCEEEEeCC
Q 027664 120 --LMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 --~~~~~~~l~~~G~~v~~g~ 138 (220)
+......++++..++.+|.
T Consensus 81 ~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 81 AVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHhhCCCCCEEEeCcc
Confidence 2333345666776766654
No 298
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.26 E-value=0.0026 Score=45.68 Aligned_cols=92 Identities=23% Similarity=0.364 Sum_probs=62.7
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC--CEEEcCCCHHHHHHhcCCccEEEEcCCCc--c-
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTVSAV--H- 118 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~d~v~d~~g~~--~- 118 (220)
+|-|+|+ |-+|...++=|+.+|-.|+++++++++.... +..-+ ..++ +.+.+.+...|+|+||++.|.. .
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~~~~i~q~Dif---d~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-QGVTILQKDIF---DLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-ccceeeccccc---ChhhhHhhhcCCceEEEeccCCCCCh
Confidence 5778887 9999999999999999999999999876432 11111 1122 2233344556999999998864 1
Q ss_pred ------cHHHHHhccccC--CEEEEeCCCC
Q 027664 119 ------PLMPLIGLLKSQ--GKLVLLGAPE 140 (220)
Q Consensus 119 ------~~~~~~~~l~~~--G~~v~~g~~~ 140 (220)
..+.++..++.. -|+..+|..+
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 123466667663 4788887654
No 299
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.26 E-value=0.0027 Score=48.41 Aligned_cols=72 Identities=19% Similarity=0.276 Sum_probs=51.6
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE---EEcCCCHHHHHHh-------cCCccEEEEc
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGIIDT 113 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~-------~~~~d~v~d~ 113 (220)
+++|.|+ |++|..++..+...|++|+++++++++.+.+...++.+. ..|..+.+.+++. .+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899997 999999999888889999999998876666555444321 1345554433322 2379999999
Q ss_pred CCC
Q 027664 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
No 300
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.25 E-value=0.0018 Score=48.99 Aligned_cols=75 Identities=21% Similarity=0.356 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~-------~~~~ 107 (220)
.+.+++|.|+ |.+|..++..+...|.+|++++++.++.++..+.+ +... ..|..+.+.+.+. .+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999997 89999999888888999999999876554443332 2211 2244444433322 1379
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999875
No 301
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.002 Score=49.54 Aligned_cols=74 Identities=14% Similarity=0.265 Sum_probs=50.5
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCE---EEcCCCHHHHHHh-------cCCcc
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~-------~~~~d 108 (220)
+.++||.|+ |.+|..+++.+...|.+|+.++++..+.+.+.+. .+... ..|..+.+.+.+. .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999997 9999999998888899999999887654444332 23221 2344454433322 13789
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++|.++|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999875
No 302
>PRK04457 spermidine synthase; Provisional
Probab=97.24 E-value=0.0072 Score=46.68 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=62.4
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHC-CCeEEEEeCCccchHHHHHHcCC----C--EEEcCCCHHHHHHhcCCccEEE-E
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGA----D--SFLVSRDQDEMQAAMGTMDGII-D 112 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~----~--~~~~~~~~~~~~~~~~~~d~v~-d 112 (220)
.+.++||++|+|+ |..+..+++.. +.++++++.+++-.+.+.+.++. + .++..+-.+.+....+.||+|+ |
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4567899999874 77777777776 45999999998766665554442 1 1222222334444445799986 4
Q ss_pred cCCC---------cccHHHHHhccccCCEEEEe
Q 027664 113 TVSA---------VHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 113 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 136 (220)
+... .+.++.+.+.|+++|.++.-
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 4221 23467788999999999873
No 303
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0029 Score=48.52 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcc-chhHHHHHHHHHHC-CCeEEEEeCCccc-hHHHHHHc---CC-C-E--EEcCCCHHH----HHHhc-
Q 027664 40 DKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSK-KSEAVERL---GA-D-S--FLVSRDQDE----MQAAM- 104 (220)
Q Consensus 40 ~~~~~~vlI~G~-g~~G~~~~~la~~~-g~~vi~~~~~~~~-~~~~~~~~---g~-~-~--~~~~~~~~~----~~~~~- 104 (220)
+..+++++|.|+ |++|..+++-+... |++|+++++++++ .+.+.+++ +. + . ..|..+.+. +++..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456788999997 99999999876666 4899999998775 44443333 22 1 1 234444433 23222
Q ss_pred -CCccEEEEcCCC
Q 027664 105 -GTMDGIIDTVSA 116 (220)
Q Consensus 105 -~~~d~v~d~~g~ 116 (220)
+++|+++.+.|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 479999988765
No 304
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.24 E-value=0.0023 Score=52.17 Aligned_cols=77 Identities=23% Similarity=0.365 Sum_probs=50.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC-------------------ccchHHHHHHc----CCCEEEcCC--
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-------------------PSKKSEAVERL----GADSFLVSR-- 95 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~-------------------~~~~~~~~~~~----g~~~~~~~~-- 95 (220)
.+.+|+|+|+|++|..++..+...|+ ++++++.. ..|.+.+++.+ +...+....
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 56789999999999999999999999 78888876 22333332222 211111111
Q ss_pred -CHHHHHHhcCCccEEEEcCCCcc
Q 027664 96 -DQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 96 -~~~~~~~~~~~~d~v~d~~g~~~ 118 (220)
+.+.+.++..++|+|+||+.+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 12334455568999999999864
No 305
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0015 Score=51.61 Aligned_cols=76 Identities=26% Similarity=0.300 Sum_probs=51.9
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-----CCC---EEEcCCCHHHHHHh-------c
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD---SFLVSRDQDEMQAA-------M 104 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~-------~ 104 (220)
..+++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.++++ .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 35789999997 99999999888888999999998876554433322 111 12355554443332 2
Q ss_pred CCccEEEEcCCC
Q 027664 105 GTMDGIIDTVSA 116 (220)
Q Consensus 105 ~~~d~v~d~~g~ 116 (220)
+++|++|.++|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 369999999874
No 306
>PRK08017 oxidoreductase; Provisional
Probab=97.23 E-value=0.0033 Score=48.09 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=51.6
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHH----h---c-CCccEEEEc
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQA----A---M-GTMDGIIDT 113 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~----~---~-~~~d~v~d~ 113 (220)
++++|.|+ |.+|..+++.+...|.+|+++.++.++.+.+ +..++..+ .|..+.+.+.+ . . +.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 9999999999888899999999988766555 44565433 35555433322 1 2 368888988
Q ss_pred CCC
Q 027664 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
No 307
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.23 E-value=0.0019 Score=49.59 Aligned_cols=75 Identities=16% Similarity=0.312 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCEE---EcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF---LVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |.+|..+++.+...|.+|+++.+++++.+++.+. .+.+.. .|..+.+.+.+. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999998888999999999988655544433 333221 244454433322 2368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999875
No 308
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.23 E-value=0.0028 Score=51.05 Aligned_cols=75 Identities=21% Similarity=0.245 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC----CC-EEEcCCCHHHHHHhcC--CccEEEEc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----AD-SFLVSRDQDEMQAAMG--TMDGIIDT 113 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g----~~-~~~~~~~~~~~~~~~~--~~d~v~d~ 113 (220)
.|++|||.|+ |.+|..+++.+...|.+|++++++........+.++ .. ...|..+.+.+.++.. ++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4688999997 999999999888889999999877654332222222 22 2235555555655544 58999999
Q ss_pred CCC
Q 027664 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 974
No 309
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=97.23 E-value=0.0016 Score=48.77 Aligned_cols=95 Identities=17% Similarity=0.119 Sum_probs=60.4
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEE---------cCCCH----HHHHH----
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL---------VSRDQ----DEMQA---- 102 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~---------~~~~~----~~~~~---- 102 (220)
..++.+||+.|+| .|.-++.+|. .|.+|++++.++...+.+.++.+..... ...+. ..+.+
T Consensus 35 ~~~~~rvL~~gCG-~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~ 112 (218)
T PRK13255 35 LPAGSRVLVPLCG-KSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAA 112 (218)
T ss_pred CCCCCeEEEeCCC-ChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcc
Confidence 3567899999997 4787777775 6999999999998777664444432110 00000 00111
Q ss_pred hcCCccEEEEcCCC--------cccHHHHHhccccCCEEEEe
Q 027664 103 AMGTMDGIIDTVSA--------VHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 103 ~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~ 136 (220)
..+.||.|+|...- ...+..+.++|++||++.++
T Consensus 113 ~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 113 DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 11368999986631 12467788999999875543
No 310
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0029 Score=49.05 Aligned_cols=75 Identities=21% Similarity=0.349 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC-----CC-EE--EcCCCHHHHHHh-------cC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----AD-SF--LVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g-----~~-~~--~~~~~~~~~~~~-------~~ 105 (220)
+++++||.|+ |.+|..+++.+...|.+|+.+.++.++.+...+.+. .. .+ .|..+++.+.+. .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999997 999999999888899999999988765544433321 11 11 244444433322 13
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
++|++|.++|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 78999999873
No 311
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=97.23 E-value=0.007 Score=42.92 Aligned_cols=98 Identities=18% Similarity=0.284 Sum_probs=62.4
Q ss_pred cccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHH
Q 027664 20 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98 (220)
Q Consensus 20 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 98 (220)
-..+||+....+..++..+---.|++++|+|. ..+|.-+..+++..|+.|+.........+
T Consensus 13 ~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~------------------ 74 (160)
T PF02882_consen 13 PGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ------------------ 74 (160)
T ss_dssp TSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH------------------
T ss_pred CCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc------------------
Confidence 34577777777777777654468999999996 68999999999999999988766643332
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 99 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+.....|+|+-++|.+..+. .+.++++..++.+|...
T Consensus 75 ---~~~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 75 ---EITRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGINY 111 (160)
T ss_dssp ---HHHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CEE
T ss_pred ---ceeeeccEEeeeeccccccc--cccccCCcEEEecCCcc
Confidence 22346789999999875433 34678888888887643
No 312
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0023 Score=48.87 Aligned_cols=75 Identities=20% Similarity=0.295 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |++|..+++.+...|.+|+.++++.++.+.+.+.+ +.. ...|..+.+.+.++ .+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999988888999999998876555544432 221 11344554433322 2368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.+.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999874
No 313
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.23 E-value=0.006 Score=44.60 Aligned_cols=96 Identities=24% Similarity=0.262 Sum_probs=60.4
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHC-CCeEEEEeCCccchHHHH---HHcCCCEE-EcCCCHHHHHHhcCCccEEEEcC
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAV---ERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~-g~~vi~~~~~~~~~~~~~---~~~g~~~~-~~~~~~~~~~~~~~~~d~v~d~~ 114 (220)
++++.+||-+|+|. |..++.+++.. +.+|+.++.+++..+.+. +..+.+.+ +-..+...... .+.||+|+-..
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~~ 120 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSRA 120 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEcc
Confidence 56689999999863 66666666644 569999999987554432 33444321 11122222212 33799998533
Q ss_pred CC--cccHHHHHhccccCCEEEEeC
Q 027664 115 SA--VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 115 g~--~~~~~~~~~~l~~~G~~v~~g 137 (220)
.. +..+..+.+.++++|+++.+-
T Consensus 121 ~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 121 VASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred ccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 22 234667889999999999874
No 314
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.22 E-value=0.0034 Score=57.00 Aligned_cols=96 Identities=19% Similarity=0.224 Sum_probs=69.8
Q ss_pred CCCEEEEEccchhHHHHHHHHHHC-CCe-------------EEEEeCCccchHHHHHHc-CCC-EEEcCCCHHHHHHhcC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAM-GVK-------------VTVISTSPSKKSEAVERL-GAD-SFLVSRDQDEMQAAMG 105 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~-g~~-------------vi~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~ 105 (220)
..++|+|+|+|.+|...+..+... +++ |++.+.+.++.+++.+.+ +++ ..+|..+.+.+.++..
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 456899999999999999877543 434 666776766666665555 432 3456777777777666
Q ss_pred CccEEEEcCCCcccHHHHHhccccCCEEEEeC
Q 027664 106 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 106 ~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 137 (220)
++|+|+.|++...+...+..+++.+-+++...
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek 679 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTAS 679 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEECc
Confidence 79999999998766777777887777776654
No 315
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0036 Score=47.87 Aligned_cols=74 Identities=22% Similarity=0.349 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC----CEEEcCCCHHHHHHh-------cCCccE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~-------~~~~d~ 109 (220)
.++++||.|+ |.+|..+++.+...|++|+.+.++.+... ....+.. ....|..+.+.+.++ .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999997 99999999888888999999988765332 2233321 122355554433332 237899
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999985
No 316
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.22 E-value=0.0039 Score=48.36 Aligned_cols=96 Identities=17% Similarity=0.214 Sum_probs=70.6
Q ss_pred ccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHH
Q 027664 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (220)
Q Consensus 21 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 99 (220)
...||+.......+...+---.|++++|+|- .-+|.-++.++...|+.|+++...-..
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~--------------------- 200 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD--------------------- 200 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------
Confidence 3567776666776766653247999999997 569999999999999999877643211
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCC
Q 027664 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
+++.+..+|+++-++|.+..+ --+.+++|-.++.+|..
T Consensus 201 l~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin 238 (287)
T PRK14176 201 LKKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence 233445789999999988644 34578888888898864
No 317
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.21 E-value=0.0048 Score=45.12 Aligned_cols=97 Identities=21% Similarity=0.212 Sum_probs=58.2
Q ss_pred hhcCCCCCCEEEEEccchhHHHHHHHHHHCC-CeEEEEeCCccchHHHHHHcCCCEE-EcCCCHH---HHHHhc--CCcc
Q 027664 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSF-LVSRDQD---EMQAAM--GTMD 108 (220)
Q Consensus 36 ~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~---~~~~~~--~~~d 108 (220)
+...+++|++||.+|+|+-+.......+..+ .+|++++.++.. +..+++.+ .|..+.+ .+.+.. +++|
T Consensus 26 ~~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 26 KFKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred HhcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence 3445689999999999865554433333333 389999998753 11234322 2333322 222222 3799
Q ss_pred EEEE-cC----CC------------cccHHHHHhccccCCEEEEeC
Q 027664 109 GIID-TV----SA------------VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 109 ~v~d-~~----g~------------~~~~~~~~~~l~~~G~~v~~g 137 (220)
+|+. .. |. ...+..+.+.|+++|+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9994 32 22 124566788999999999864
No 318
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.21 E-value=0.001 Score=45.24 Aligned_cols=88 Identities=17% Similarity=0.313 Sum_probs=53.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCc-cchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 120 (220)
+.-+|-|+|+|-+|..+...++..|..|..+.... +..+++...++...+.+ ..+..+.+|++|-|+..+ .+
T Consensus 9 ~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~------~~~~~~~aDlv~iavpDd-aI 81 (127)
T PF10727_consen 9 ARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILD------LEEILRDADLVFIAVPDD-AI 81 (127)
T ss_dssp ---EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CC-HH
T ss_pred CccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccc------cccccccCCEEEEEechH-HH
Confidence 34578999999999999999999999988876543 34455544444433332 223345799999999988 57
Q ss_pred HHHHhccccC-----CEEEEe
Q 027664 121 MPLIGLLKSQ-----GKLVLL 136 (220)
Q Consensus 121 ~~~~~~l~~~-----G~~v~~ 136 (220)
......|... |+++.-
T Consensus 82 ~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 82 AEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp HHHHHHHHCC--S-TT-EEEE
T ss_pred HHHHHHHHHhccCCCCcEEEE
Confidence 7776666554 555543
No 319
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=97.20 E-value=0.005 Score=46.08 Aligned_cols=116 Identities=12% Similarity=-0.034 Sum_probs=68.1
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc-chHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 120 (220)
++.+|||+|+|.++.-=+..+...|++|++++..-. ....+. ..|.-..+ ..+.+ .....++++||-|++.+..-
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~-~r~~~--~~dl~g~~LViaATdD~~vN 99 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLI-KGNYD--KEFIKDKHLIVIATDDEKLN 99 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEE-eCCCC--hHHhCCCcEEEECCCCHHHH
Confidence 578999999999998888888889999998887643 223332 22221111 11111 11235899999999987533
Q ss_pred HHHHhccccCCEEEEeCCCCCCCCCCchhhhcC-CeEEEEEe
Q 027664 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG-RKIVGGSL 161 (220)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 161 (220)
+......+..|.++.........+|-.+.++.+ .+++.-+.
T Consensus 100 ~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 100 NKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred HHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence 344444455576666544333344444433333 45554443
No 320
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.20 E-value=0.0036 Score=49.91 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=51.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCC--CeEEEEeCCccchHHHHHHcC---CCEE-EcCCCHHHHHHhcCCccEEEEcC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG---ADSF-LVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g--~~vi~~~~~~~~~~~~~~~~g---~~~~-~~~~~~~~~~~~~~~~d~v~d~~ 114 (220)
.|.++||.|+ |.+|..+++.+...| .+|++.+++..+...+.+.+. ...+ .|..+.+.+.+...++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 4688999997 999999998776665 588888876554433333332 2111 35566666766667899999998
Q ss_pred CC
Q 027664 115 SA 116 (220)
Q Consensus 115 g~ 116 (220)
|.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 74
No 321
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.19 E-value=0.0045 Score=46.91 Aligned_cols=75 Identities=24% Similarity=0.331 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE---EEcCCCHHHHHHh-------cCCccEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~-------~~~~d~v 110 (220)
++.+++|.|+ |.+|..++..+...|..|+...++.++.+.+...++... ..|-.+.+.++++ .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 999999998888889988888887766666545444321 1344444443332 2479999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
|.++|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
No 322
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.19 E-value=0.0025 Score=48.98 Aligned_cols=72 Identities=19% Similarity=0.289 Sum_probs=50.4
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC--EEEcCCCHHHHHHh-------cCCccEEE
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAA-------MGTMDGII 111 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~--~~~~~~~~~~~~~~-------~~~~d~v~ 111 (220)
++||.|+ +++|..+++.+...|++|+.+++++++.++..+++ +.. ...|..+.+.++++ .+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899997 89999999888888999999998877655554433 211 12344554443332 24799999
Q ss_pred EcCCC
Q 027664 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
++.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99874
No 323
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.19 E-value=0.0077 Score=45.57 Aligned_cols=99 Identities=26% Similarity=0.347 Sum_probs=70.4
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCC---CEE-EcCCCHHHHHHhcC-CccEEEEc
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---DSF-LVSRDQDEMQAAMG-TMDGIIDT 113 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~---~~~-~~~~~~~~~~~~~~-~~d~v~d~ 113 (220)
..+|.+||=+|+| +|-++..+++..|- +|++++-+++-+....++..- ..+ +...+.+.+. +.+ .||+|.-+
T Consensus 49 ~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LP-f~D~sFD~vt~~ 126 (238)
T COG2226 49 IKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLP-FPDNSFDAVTIS 126 (238)
T ss_pred CCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCC-CCCCccCEEEee
Confidence 4589999999887 59999999999886 999999999877766555431 111 1122322222 223 79998766
Q ss_pred CCC------cccHHHHHhccccCCEEEEeCCCC
Q 027664 114 VSA------VHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 114 ~g~------~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.|- +..+.++.+.|+|||+++.+....
T Consensus 127 fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 127 FGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred ehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 664 235788999999999999987654
No 324
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.19 E-value=0.007 Score=47.14 Aligned_cols=76 Identities=26% Similarity=0.259 Sum_probs=56.8
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-E-------cCCCHH----HHHHhc---
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-L-------VSRDQD----EMQAAM--- 104 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~-------~~~~~~----~~~~~~--- 104 (220)
++..+++|.|+ .++|++.+.-++..|++|.++.++.++.+++++.++.... . |-.+.+ .++++.
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 45578999975 8999999999999999999999999999999888874221 1 111112 223332
Q ss_pred CCccEEEEcCCC
Q 027664 105 GTMDGIIDTVSA 116 (220)
Q Consensus 105 ~~~d~v~d~~g~ 116 (220)
..+|.+|.|+|.
T Consensus 111 ~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 111 GPIDNLFCCAGV 122 (331)
T ss_pred CCcceEEEecCc
Confidence 379999999997
No 325
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.18 E-value=0.0032 Score=50.79 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=53.6
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc--C--CCEE-EcCCCHHHHHHhcCCccEEEEcC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--G--ADSF-LVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~--g--~~~~-~~~~~~~~~~~~~~~~d~v~d~~ 114 (220)
..+.+|||.|+ |.+|..+++.+...|.+|++++++.++...+...+ + ...+ .|..+.+.+.+...++|+||.++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 45788999997 99999999988888999999888765544433332 1 1111 24445555666666899999998
Q ss_pred CC
Q 027664 115 SA 116 (220)
Q Consensus 115 g~ 116 (220)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 74
No 326
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.18 E-value=0.0078 Score=48.11 Aligned_cols=86 Identities=22% Similarity=0.291 Sum_probs=60.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc--
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 119 (220)
.|.+|.|+|.|.+|..+++.++.+|.+|++.+++....... .. .. ..+.+.....|+|+-+++....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence 56789999999999999999999999999999876432111 11 11 1234455678999999876421
Q ss_pred ---HHHHHhccccCCEEEEeCC
Q 027664 120 ---LMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (220)
-...+..++++..++.++-
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 2345678888888887753
No 327
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=97.18 E-value=0.0043 Score=49.94 Aligned_cols=87 Identities=14% Similarity=0.051 Sum_probs=56.9
Q ss_pred hhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHH----HHHHcC------CCEE-EcCCC
Q 027664 29 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE----AVERLG------ADSF-LVSRD 96 (220)
Q Consensus 29 ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~----~~~~~g------~~~~-~~~~~ 96 (220)
|||.-++.-.. -.+++|||.|+ |-+|..++..+...|.+|+++++....... +....+ ...+ .|..+
T Consensus 2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 56766654443 44578999997 999999999988889999999875432211 111111 1112 24444
Q ss_pred HHHHHHhcCCccEEEEcCCC
Q 027664 97 QDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 97 ~~~~~~~~~~~d~v~d~~g~ 116 (220)
.+.+.+...++|+||.+++.
T Consensus 81 ~~~l~~~~~~~d~ViHlAa~ 100 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAAL 100 (348)
T ss_pred HHHHHHHhhCCCEEEECccc
Confidence 55555655689999999863
No 328
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.18 E-value=0.0047 Score=48.29 Aligned_cols=95 Identities=17% Similarity=0.197 Sum_probs=69.7
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEc-cchhHHHHHHHHHHCCCeEEEEe-CCccchHHHHHHcCCCEEEcCCCHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERLGADSFLVSRDQDE 99 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G-~g~~G~~~~~la~~~g~~vi~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~ 99 (220)
..||+..+....+...+---.|++|+|+| .+.+|.-++.++...|+.|++.. ++.+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~---------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD---------------------- 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------
Confidence 46777666666666655335799999999 59999999999999999999884 4321
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+.+.....|+|+-|+|.+..+... .+++|..++.+|...
T Consensus 195 l~e~~~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~ 233 (296)
T PRK14188 195 LPAVCRRADILVAAVGRPEMVKGD--WIKPGATVIDVGINR 233 (296)
T ss_pred HHHHHhcCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence 223334679999999988654443 388888888888643
No 329
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.18 E-value=0.0028 Score=50.43 Aligned_cols=75 Identities=20% Similarity=0.227 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---C----CCE-EEcCCCHHHHHHhcCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G----ADS-FLVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g----~~~-~~~~~~~~~~~~~~~~~d~v~d 112 (220)
.++++||.|+ |.+|..++..+...|.+|+++.++..+.......+ + ... ..|..+.+.+.+...++|+||.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 4689999997 99999999988888999988877765433321111 1 111 1244555566666668999999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 84 ~A~~ 87 (325)
T PLN02989 84 TASP 87 (325)
T ss_pred eCCC
Confidence 9874
No 330
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.18 E-value=0.0041 Score=47.60 Aligned_cols=75 Identities=20% Similarity=0.270 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc-chHHHHHHcCCC---EEEcCCCHHHHHHh-------cCCccE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~---~~~~~~~~~~~~~~-------~~~~d~ 109 (220)
.++++||.|+ +++|..+++.+...|++|+++.+++. +.....+..+.+ ...|..+.+.++++ .+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999997 89999999988889999998876542 122222334432 22455565544332 247999
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
++++.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999874
No 331
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.17 E-value=0.0025 Score=48.74 Aligned_cols=75 Identities=20% Similarity=0.381 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |++|..+++.+...|++|+.++++.++.....+++ +... ..|-.+.+.+.++ .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 99999999888888999999998876655543333 2211 1344554433332 2369
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999984
No 332
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0036 Score=48.54 Aligned_cols=73 Identities=19% Similarity=0.256 Sum_probs=51.9
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE---EEcCCCHHHHHHh-------cCCccEEEE
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~-------~~~~d~v~d 112 (220)
+++||.|+ |.+|..+++.+...|.+|+++.++.++.+.+.+..+... ..|..+.+.+.+. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999997 999999998888889999999998876666544433221 2355555443322 236899999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9875
No 333
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.17 E-value=0.0032 Score=48.93 Aligned_cols=99 Identities=17% Similarity=0.218 Sum_probs=64.8
Q ss_pred CCCEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCc---cchHHHHHHcCCC--EEEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGAD--SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~la~~~g~~vi~~~~~~---~~~~~~~~~~g~~--~~~~~~~~~~~~~~-------~~~ 106 (220)
.++++||.|+ +++|.++++.+...|++|+++.++. ++.+++.+.++.. ...|..+.+.++++ .+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999996 4899999988888899999988774 2333343444532 22455665443332 247
Q ss_pred ccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEeCCCC
Q 027664 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 107 ~d~v~d~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+|++++++|... ..+..+..+.++|+++.++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 999999988410 0133445666779998876543
No 334
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.17 E-value=0.0025 Score=46.01 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=27.8
Q ss_pred EEEEEccchhHHHHHHHHHHCCC-eEEEEeCCc
Q 027664 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~ 76 (220)
+|+|+|+|++|..+++.+...|. +++.++...
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 48999999999999998888899 788888765
No 335
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.17 E-value=0.0027 Score=48.25 Aligned_cols=75 Identities=23% Similarity=0.328 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCE---EEcCCCHHHHHHhc-------CCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~-------~~~ 107 (220)
.++++||.|+ |.+|..++..+...|.+|++++++.++.....+. .+.+. ..|..+.+.+.+.. +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 9999999988888899999999986544433222 22211 12445544443322 368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999865
No 336
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.16 E-value=0.002 Score=51.62 Aligned_cols=77 Identities=26% Similarity=0.390 Sum_probs=50.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCcc---------------------chHHH---HHHcCCCEEEcC--
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---------------------KKSEA---VERLGADSFLVS-- 94 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~---------------------~~~~~---~~~~g~~~~~~~-- 94 (220)
...+|+|+|+|++|..+++.+...|. ++++++...- |.+.+ .+++..+.-+..
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 45789999999999999999999999 8888887531 11111 122322111111
Q ss_pred --CCHHHHHHhcCCccEEEEcCCCcc
Q 027664 95 --RDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 95 --~~~~~~~~~~~~~d~v~d~~g~~~ 118 (220)
-..+.+.++..++|+|+||+.+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 103 QDVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred ccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 113344555678999999999864
No 337
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=97.15 E-value=0.018 Score=44.06 Aligned_cols=155 Identities=17% Similarity=0.176 Sum_probs=83.0
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCC----
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---- 116 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~---- 116 (220)
.++.+||-+|+|. |..+..+++ .|.+++.++.+++..+.+.+.......+.. +.+.+.-..+.||+|+....-
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~-d~~~~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG-DIESLPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc-CcccCcCCCCcEEEEEECchhhhcC
Confidence 4578899999875 666655554 588999999998776666443332222211 111111111369999854321
Q ss_pred --cccHHHHHhccccCCEEEEeCCCCCCCCCCchhhhcC-CeEEEEEecCCHHHHHHHHHHHHcCCCccce--EEeeccc
Q 027664 117 --VHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG-RKIVGGSLIGGLKETQEMIDFAAKHNIRADI--EVIPADY 191 (220)
Q Consensus 117 --~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~~--~~~~~~~ 191 (220)
...+..+.+.++++|.++......+...- ....+.. ..........+.+++...+ ..-.+.... .++.+++
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~e-l~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~~~~~~~~f~~ 193 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPE-LHQAWQAVDERPHANRFLPPDAIEQAL---NGWRYQHHIQPITLWFDD 193 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCCCCchHH-HHHHHHHhccCCccccCCCHHHHHHHH---HhCCceeeeeEEEEECCC
Confidence 12467788999999999987554322110 0111100 0001111222334444333 332333333 4567888
Q ss_pred HHHHHHHHHcC
Q 027664 192 VNTAMERLAKA 202 (220)
Q Consensus 192 ~~~a~~~~~~~ 202 (220)
..+.++.++.-
T Consensus 194 ~~~~l~~lk~~ 204 (251)
T PRK10258 194 ALSAMRSLKGI 204 (251)
T ss_pred HHHHHHHHHHh
Confidence 88888877643
No 338
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.15 E-value=0.0034 Score=48.51 Aligned_cols=75 Identities=21% Similarity=0.322 Sum_probs=54.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---C-C-CEEEcCCCHHHH-------HHhcCCcc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G-A-DSFLVSRDQDEM-------QAAMGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g-~-~~~~~~~~~~~~-------~~~~~~~d 108 (220)
.|+.|||.|+ +++|.+.++-...+|++++..+.+.+-.++..+.. | + .+..|-++.+++ ++..+.+|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 6889999997 79999998877777999999998877655554443 3 2 455666765543 33345799
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++++-+|-
T Consensus 117 ILVNNAGI 124 (300)
T KOG1201|consen 117 ILVNNAGI 124 (300)
T ss_pred EEEecccc
Confidence 99998875
No 339
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0022 Score=48.97 Aligned_cols=75 Identities=21% Similarity=0.245 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |++|..+++.+...|++|+.++++.++.+.+.+. .+.. ...|..+.+.+.++ .+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999997 9999999988888899999999987654443332 2321 12344444433322 2468
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 340
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.14 E-value=0.0033 Score=48.21 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHH---HHcCCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAV---ERLGAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~---~~~g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |++|..+++.+...|++|+++.++ ++.+.+. ...+.+ ...|..+.+.+.++ .+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999997 999999999888899999998887 3333332 223322 22355555444332 2368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999999875
No 341
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=97.14 E-value=0.0054 Score=45.90 Aligned_cols=37 Identities=32% Similarity=0.393 Sum_probs=32.4
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~ 77 (220)
..|.+|.|.|.|.+|..+++++...|++++.+.++..
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 4689999999999999999999999998777776655
No 342
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.12 E-value=0.0034 Score=48.42 Aligned_cols=75 Identities=17% Similarity=0.265 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ +++|..++..+...|++|+++.++.++.+.....+ +.. ...|-.+.+.++++ .+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5788999997 89999999887788999999988876655443333 322 12455554443332 2469
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999885
No 343
>PRK07985 oxidoreductase; Provisional
Probab=97.12 E-value=0.012 Score=46.32 Aligned_cols=76 Identities=16% Similarity=0.105 Sum_probs=48.8
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc--chHHHH---HHcCCC---EEEcCCCHHHHHHh-------c
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAV---ERLGAD---SFLVSRDQDEMQAA-------M 104 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~--~~~~~~---~~~g~~---~~~~~~~~~~~~~~-------~ 104 (220)
..++++||.|+ |++|..+++.+...|++|+++.++.+ ..+++. +..+.. ...|..+.+.+.++ .
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35688999997 99999999888888999988765432 222222 223322 22355554433322 2
Q ss_pred CCccEEEEcCCC
Q 027664 105 GTMDGIIDTVSA 116 (220)
Q Consensus 105 ~~~d~v~d~~g~ 116 (220)
+++|+++.+.|.
T Consensus 127 g~id~lv~~Ag~ 138 (294)
T PRK07985 127 GGLDIMALVAGK 138 (294)
T ss_pred CCCCEEEECCCC
Confidence 478999998874
No 344
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.12 E-value=0.0018 Score=46.04 Aligned_cols=74 Identities=23% Similarity=0.337 Sum_probs=47.6
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCC-eEEEEeCC--ccchHHHHHHc---CCCEE---EcCCCHHHHHHh-------cCC
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAVERL---GADSF---LVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~-~vi~~~~~--~~~~~~~~~~~---g~~~~---~~~~~~~~~~~~-------~~~ 106 (220)
++++|.|+ +++|..+++.+...|. +|+.+.++ .++.+++..++ +.... .|..+.+.++++ .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46899997 9999999987776677 77777777 44444443333 43211 234444433332 247
Q ss_pred ccEEEEcCCCc
Q 027664 107 MDGIIDTVSAV 117 (220)
Q Consensus 107 ~d~v~d~~g~~ 117 (220)
+|++|.+.|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999998863
No 345
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0039 Score=47.77 Aligned_cols=74 Identities=22% Similarity=0.284 Sum_probs=52.1
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC---CCE-EEcCCCHHHHHHhc-------CCccEE
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---ADS-FLVSRDQDEMQAAM-------GTMDGI 110 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~~-~~~~~~~~~~~~~~-------~~~d~v 110 (220)
+++++|.|+ |.+|..++..+...|++|++++++.++.+.+.+.+. +.. ..|..+.+.+.... +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999997 999999998887889999999988776665554442 211 23455554443221 369999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999975
No 346
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.11 E-value=0.0042 Score=49.26 Aligned_cols=84 Identities=20% Similarity=0.259 Sum_probs=59.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcc-c-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-P- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~- 119 (220)
.|+++.|+|-|.+|..+++.++.+|.+|+...+.... ..... +. .+.++....|+|.-+++-.. +
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~------~~~~~----~~---~l~ell~~sDiv~l~~Plt~~T~ 212 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGAS------VCREG----YT---PFEEVLKQADIVTLHCPLTETTQ 212 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCccc------ccccc----cC---CHHHHHHhCCEEEEcCCCChHHh
Confidence 4789999999999999999999999999988654311 11110 11 24445557899988776321 1
Q ss_pred ---HHHHHhccccCCEEEEeCC
Q 027664 120 ---LMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (220)
=...++.|+++..++.++-
T Consensus 213 ~li~~~~l~~mk~ga~lIN~aR 234 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGR 234 (314)
T ss_pred cccCHHHHHhCCCCeEEEECCC
Confidence 1457788999999988864
No 347
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.10 E-value=0.0042 Score=49.33 Aligned_cols=75 Identities=21% Similarity=0.253 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---C----CCEE-EcCCCHHHHHHhcCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G----ADSF-LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g----~~~~-~~~~~~~~~~~~~~~~d~v~d 112 (220)
.|++|||.|+ |.+|..+++.+...|.+|+++.++.++.+...... + ...+ .|..+.+.+.+...++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4789999997 99999999888888999998888765433221111 1 1111 233444556666668999999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
+++.
T Consensus 84 ~A~~ 87 (322)
T PLN02986 84 TASP 87 (322)
T ss_pred eCCC
Confidence 9874
No 348
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.10 E-value=0.0025 Score=47.07 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=29.8
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
...+|+|.|+|++|..+++.+...|. +++.++..
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34779999999999999999988999 78888877
No 349
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=97.10 E-value=0.015 Score=43.26 Aligned_cols=118 Identities=14% Similarity=0.058 Sum_probs=74.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCc-cchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
-.|++|||+|+|.+|.-=+.++...|++|+++.... ++...+....+.+.+ +...-.....++++||=|++++..
T Consensus 10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~----~~~~~~~~~~~~~lviaAt~d~~l 85 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWI----EREFDAEDLDDAFLVIAATDDEEL 85 (210)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchh----hcccChhhhcCceEEEEeCCCHHH
Confidence 367899999999999999999999999999988886 333333333332211 111111112258999999998754
Q ss_pred HHHHHhccccCCEEEEeCCCCCCCCCCchhhhc-CCeEEEEEec
Q 027664 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT-GRKIVGGSLI 162 (220)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ 162 (220)
-+.....++..+.+|..........+..+..+. +.+.+.-+..
T Consensus 86 n~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~ 129 (210)
T COG1648 86 NERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTG 129 (210)
T ss_pred HHHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECC
Confidence 456667777788888876655444444443333 3445444433
No 350
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.10 E-value=0.0048 Score=46.96 Aligned_cols=75 Identities=23% Similarity=0.275 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCcc-chHHHHHHcCCC---EEEcCCCHHHHHH----h---cCCccE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGAD---SFLVSRDQDEMQA----A---MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~---~~~~~~~~~~~~~----~---~~~~d~ 109 (220)
.++++||.|+ |++|..+++.+...|++|+.++++.. +.....+.++.. ...|..+.+.+.+ . .+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999997 89999999888888999999987652 112222334422 1234455443332 2 247999
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
+++++|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999875
No 351
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.10 E-value=0.0041 Score=48.28 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=51.4
Q ss_pred CCCCCEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCc---cchHHHHHHcCCC--EEEcCCCHHHHHHh-------c
Q 027664 40 DKPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGAD--SFLVSRDQDEMQAA-------M 104 (220)
Q Consensus 40 ~~~~~~vlI~G~---g~~G~~~~~la~~~g~~vi~~~~~~---~~~~~~~~~~g~~--~~~~~~~~~~~~~~-------~ 104 (220)
+..++++||.|+ +++|..+++.+...|++|+.+.+++ ++.+++.++++.. ...|-.+.+.++++ .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 456789999986 5899999988888999998887653 2334444445532 22455554443332 2
Q ss_pred CCccEEEEcCCC
Q 027664 105 GTMDGIIDTVSA 116 (220)
Q Consensus 105 ~~~d~v~d~~g~ 116 (220)
+.+|++++++|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 369999999873
No 352
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0036 Score=47.61 Aligned_cols=74 Identities=20% Similarity=0.294 Sum_probs=50.4
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-----CCC---EEEcCCCHHHHHH----h---cCC
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD---SFLVSRDQDEMQA----A---MGT 106 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~----~---~~~ 106 (220)
+++++|.|+ |++|..+++.+...|.+|+++++++++...+...+ +.. ...|..+.+.+.+ + .++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999997 99999999877778999999999877655543322 211 1235555443322 2 247
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++|.++|.
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 9999999873
No 353
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.022 Score=43.11 Aligned_cols=75 Identities=19% Similarity=0.223 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc-hHHHHH---HcCCC-E--EEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVE---RLGAD-S--FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~-~~~~~~---~~g~~-~--~~~~~~~~~~~~~-------~~~ 106 (220)
++++++|.|+ |++|..+++.+...|.+++.+.++... .....+ ..+.. . ..|..+.+.+.+. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5688999997 999999999988899998877765432 222222 22321 1 1244444433322 247
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (245)
T PRK12937 84 IDVLVNNAGV 93 (245)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 354
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.09 E-value=0.0038 Score=49.63 Aligned_cols=120 Identities=17% Similarity=0.252 Sum_probs=75.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCc-cc--
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-HP-- 119 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~-- 119 (220)
|+++-|+|.|.+|..+++.++.+|.+|++.++...+- .....+. .- .+.+.++....|++.-.+.-. ++
T Consensus 142 gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~--~~~~~~~---~~---~~~Ld~lL~~sDiv~lh~PlT~eT~g 213 (324)
T COG0111 142 GKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRE--RAGVDGV---VG---VDSLDELLAEADILTLHLPLTPETRG 213 (324)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchh--hhccccc---ee---cccHHHHHhhCCEEEEcCCCCcchhc
Confidence 7899999999999999999999999999999943321 1111121 11 122444445678887666532 11
Q ss_pred --HHHHHhccccCCEEEEeCCCCCCCCCCchhhhcCCeEEEEEecCCHHHHHHHHHHHHcCCCccc-eEEeecccHHH
Q 027664 120 --LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRAD-IEVIPADYVNT 194 (220)
Q Consensus 120 --~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~i~~~-~~~~~~~~~~~ 194 (220)
=...+..|++|..++.++-.. .-+.+.+++++.+|++.-- +++|+-|-.++
T Consensus 214 ~i~~~~~a~MK~gailIN~aRG~------------------------vVde~aL~~AL~~G~i~gA~lDVf~~EPl~~ 267 (324)
T COG0111 214 LINAEELAKMKPGAILINAARGG------------------------VVDEDALLAALDSGKIAGAALDVFEEEPLPA 267 (324)
T ss_pred ccCHHHHhhCCCCeEEEECCCcc------------------------eecHHHHHHHHHcCCcceEEecCCCCCCCCC
Confidence 135667787777777664311 1245667777778877743 35555443333
No 355
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0035 Score=48.08 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=52.2
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCe-EEEEeCCccchHHHHH---HcCCC---EEEcCCCHHHHHHh-------cC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVE---RLGAD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~-vi~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~-------~~ 105 (220)
..+++++|.|+ |++|..+++.+...|++ |++++++.++...... ..+.. ...|..+.+.+.+. .+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35688999997 99999999988889997 9988887654443322 23332 22355555444332 13
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
++|.+|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999985
No 356
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.08 E-value=0.012 Score=46.68 Aligned_cols=85 Identities=28% Similarity=0.346 Sum_probs=60.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCc-cc-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-HP- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~- 119 (220)
.|+++.|+|-|.+|..+++.++.+|.+|+..++..... ..+.. +. .+.++....|+|.-++.-. ++
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~~----~~---~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEYE----RV---SLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCce----ee---cHHHHhhcCCEEEEeCCCCchhh
Confidence 57899999999999999999999999999998764211 11221 11 2445555679998777532 21
Q ss_pred ---HHHHHhccccCCEEEEeCC
Q 027664 120 ---LMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (220)
=...++.|+++..++.++-
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aR 233 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGR 233 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCC
Confidence 2467889999999998864
No 357
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=97.08 E-value=0.0045 Score=46.40 Aligned_cols=93 Identities=29% Similarity=0.351 Sum_probs=61.8
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHH---HcCCCEEEcCCCH--HHHHHhcCCccEEEE----
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSFLVSRDQ--DEMQAAMGTMDGIID---- 112 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~--~~~~~~~~~~d~v~d---- 112 (220)
+|.+||=+|||+ |+++.-+|+. |++|+.++-+++-.+.+.. +-|.. +|+... +.+.+..+.||+|+.
T Consensus 59 ~g~~vLDvGCGg-G~Lse~mAr~-Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEVl 134 (243)
T COG2227 59 PGLRVLDVGCGG-GILSEPLARL-GASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEVL 134 (243)
T ss_pred CCCeEEEecCCc-cHhhHHHHHC-CCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhHH
Confidence 788999999863 6666666655 8999999999876655531 12222 445442 233333357999974
Q ss_pred -cCCCcc-cHHHHHhccccCCEEEEeCC
Q 027664 113 -TVSAVH-PLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 113 -~~g~~~-~~~~~~~~l~~~G~~v~~g~ 138 (220)
=+..+. .+..+.++++|+|.+.....
T Consensus 135 EHv~dp~~~~~~c~~lvkP~G~lf~STi 162 (243)
T COG2227 135 EHVPDPESFLRACAKLVKPGGILFLSTI 162 (243)
T ss_pred HccCCHHHHHHHHHHHcCCCcEEEEecc
Confidence 244433 35668889999999988754
No 358
>PRK08264 short chain dehydrogenase; Validated
Probab=97.08 E-value=0.0037 Score=47.29 Aligned_cols=71 Identities=25% Similarity=0.316 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcC--CCE-EEcCCCHHHHHHhc---CCccEEEEc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG--ADS-FLVSRDQDEMQAAM---GTMDGIIDT 113 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g--~~~-~~~~~~~~~~~~~~---~~~d~v~d~ 113 (220)
.+++++|.|+ |.+|..+++.+...|. +|+.++++.++... .+ +.. ..|..+.+.+.+.. +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 5678999997 9999999998888999 99999988754332 22 221 23555555554443 368999999
Q ss_pred CCC
Q 027664 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
+|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 986
No 359
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.08 E-value=0.0035 Score=48.02 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |++|..++..+...|++++.++++.++.+.+... .+.+ ...|..+.+.++++ .+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999997 9999999988888899999998887665544332 2322 12355555443332 2478
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.++|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 360
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.08 E-value=0.006 Score=46.91 Aligned_cols=75 Identities=21% Similarity=0.340 Sum_probs=50.1
Q ss_pred CCCEEEEEccc---hhHHHHHHHHHHCCCeEEEEeCCccc---hHHHHHHcCCCEE--EcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~g---~~G~~~~~la~~~g~~vi~~~~~~~~---~~~~~~~~g~~~~--~~~~~~~~~~~~-------~~~ 106 (220)
.|+++||.|++ ++|.++++.+...|++|+++.++.+. .+++.++++.... .|..+.+.++++ .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999963 89999998888889999998877532 2334344443222 354554433322 246
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++++|.
T Consensus 89 ld~lv~nAg~ 98 (258)
T PRK07533 89 LDFLLHSIAF 98 (258)
T ss_pred CCEEEEcCcc
Confidence 8999999874
No 361
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.08 E-value=0.0045 Score=48.25 Aligned_cols=127 Identities=25% Similarity=0.294 Sum_probs=73.8
Q ss_pred cceEeCCCCCCccccccccchhhhhh--hHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHH
Q 027664 6 HFVVRIPEGAPLDATAPLLCAGITVY--SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (220)
Q Consensus 6 ~~~~~ip~~~s~~~aa~~~~~~~ta~--~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~ 82 (220)
..++++++.+.| +......|++ .++.+. +++|.+||=+|+|+ |.+++..++. |+ +|++++..+...+..
T Consensus 130 ~~~i~lDPGlAF----GTG~HpTT~lcL~~Le~~--~~~g~~vlDvGcGS-GILaIAa~kL-GA~~v~g~DiDp~AV~aa 201 (300)
T COG2264 130 ELNIELDPGLAF----GTGTHPTTSLCLEALEKL--LKKGKTVLDVGCGS-GILAIAAAKL-GAKKVVGVDIDPQAVEAA 201 (300)
T ss_pred ceEEEEcccccc----CCCCChhHHHHHHHHHHh--hcCCCEEEEecCCh-hHHHHHHHHc-CCceEEEecCCHHHHHHH
Confidence 344555555544 3444545543 233333 47999999999873 7777665554 87 799999887665444
Q ss_pred HHHc---CCCEEEcCCCHHHHHHhc-CCccEEEEcCCCc---ccHHHHHhccccCCEEEEeCCCC
Q 027664 83 VERL---GADSFLVSRDQDEMQAAM-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 83 ~~~~---g~~~~~~~~~~~~~~~~~-~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+... +.+............... +.||+|+--.=.. .......+.++++|++++.|...
T Consensus 202 ~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~ 266 (300)
T COG2264 202 RENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE 266 (300)
T ss_pred HHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence 3322 232110000011112222 3799987443222 12466788999999999998755
No 362
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.07 E-value=0.0036 Score=47.88 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=52.4
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCC--CE-EEcCCCHHHHHHh-------cCC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA--DS-FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~--~~-~~~~~~~~~~~~~-------~~~ 106 (220)
-.+++++|.|+ |.+|..+++.+...|++|+.+.++.+....+.+. .+. .. ..|..+.+.+.+. .+.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 35789999997 9999999988878899999999987655444332 232 11 2344554433322 236
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|.++.++|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 363
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.07 E-value=0.0028 Score=50.46 Aligned_cols=75 Identities=13% Similarity=0.257 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----C-CC---EEEcCCC--HHHH---HHhcC--
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----G-AD---SFLVSRD--QDEM---QAAMG-- 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g-~~---~~~~~~~--~~~~---~~~~~-- 105 (220)
.|++++|.|+ |++|...++.+...|++|+.+++++++.++..+++ + .. ...|..+ .+.. .+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5889999997 89999999877778999999999988776654433 1 11 1234332 2222 22223
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
.+|++++++|.
T Consensus 132 didilVnnAG~ 142 (320)
T PLN02780 132 DVGVLINNVGV 142 (320)
T ss_pred CccEEEEecCc
Confidence 45689998874
No 364
>PRK06720 hypothetical protein; Provisional
Probab=97.07 E-value=0.0051 Score=44.19 Aligned_cols=75 Identities=20% Similarity=0.257 Sum_probs=49.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
+++.++|.|+ +++|..++..+...|++|++++++.+..+...+.+ +.. ...|..+.+.++++ .+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999997 78999999888888999999998766544333332 322 12344443333221 2368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++++++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 888888774
No 365
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.06 E-value=0.0041 Score=48.29 Aligned_cols=75 Identities=23% Similarity=0.341 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +... ..|..+.+.+.++ .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999997 99999999988888999999998876554443332 3221 2344444433322 2479
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999999883
No 366
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.01 Score=45.32 Aligned_cols=100 Identities=15% Similarity=0.204 Sum_probs=60.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEe-CCccchHHHHHHc---CCCE---EEcCCCHHHH----HHh------
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERL---GADS---FLVSRDQDEM----QAA------ 103 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~-~~~~~~~~~~~~~---g~~~---~~~~~~~~~~----~~~------ 103 (220)
.++++||.|+ |++|..+++.+...|++|++.. ++.++.+....++ +... ..|..+.+.+ .++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4688999997 8999999998888999998875 4434433332222 2211 1233332211 111
Q ss_pred -cC--CccEEEEcCCCcc----------cH---------------HHHHhccccCCEEEEeCCCCC
Q 027664 104 -MG--TMDGIIDTVSAVH----------PL---------------MPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 104 -~~--~~d~v~d~~g~~~----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 141 (220)
.+ ++|++++++|... .+ +.++..+++.|+++.++....
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 12 6999999987420 01 224455666789998876543
No 367
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0051 Score=47.79 Aligned_cols=73 Identities=23% Similarity=0.385 Sum_probs=49.7
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh------cCCccEE
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA------MGTMDGI 110 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~------~~~~d~v 110 (220)
++.++|.|+|++|..++..+. .|.+|+.++++.++.+++.+.+ +.+ ...|..+.+.+.++ .+++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 457888999899999998774 7999999998876655443333 322 12355555433322 1479999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
++++|.
T Consensus 81 i~nAG~ 86 (275)
T PRK06940 81 VHTAGV 86 (275)
T ss_pred EECCCc
Confidence 999985
No 368
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0044 Score=46.97 Aligned_cols=76 Identities=13% Similarity=0.220 Sum_probs=52.0
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~ 106 (220)
..+++++|.|+ |.+|..++..+...|.+|+++++++++.+.+.+.+ +.. ...|..+.+.+.+. .++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34578999997 99999999988888999999999876655443322 221 12344454433222 236
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|+++.++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 369
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0054 Score=46.43 Aligned_cols=75 Identities=23% Similarity=0.323 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---C---CC-EEEcCCC--HHH-------HHHhc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G---AD-SFLVSRD--QDE-------MQAAM 104 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g---~~-~~~~~~~--~~~-------~~~~~ 104 (220)
++++++|.|+ |++|..+++.+...|.+|++++++.++.+.+.+.+ + .. .-.|..+ .+. +.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4678999997 99999999888888999999999887655543332 2 11 1123221 111 11212
Q ss_pred -CCccEEEEcCCC
Q 027664 105 -GTMDGIIDTVSA 116 (220)
Q Consensus 105 -~~~d~v~d~~g~ 116 (220)
+.+|++|.++|.
T Consensus 85 ~~~id~vi~~ag~ 97 (239)
T PRK08703 85 QGKLDGIVHCAGY 97 (239)
T ss_pred CCCCCEEEEeccc
Confidence 468999999984
No 370
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=97.05 E-value=0.0095 Score=39.94 Aligned_cols=87 Identities=17% Similarity=0.312 Sum_probs=59.2
Q ss_pred EEEEEccchhHHHHHHHHHHC--CCeEEEEeCC-ccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027664 45 HVGVVGLGGLGHVAVKFAKAM--GVKVTVISTS-PSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~--g~~vi~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 121 (220)
++.|+|+|.+|......++.. +.+++.+... +++.+.+.+.+|.. .+ .+.+.+.+. ..+|+|+-|+......+
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~~~~~ll~~-~~~D~V~I~tp~~~h~~ 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--TDLEELLAD-EDVDAVIIATPPSSHAE 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--SSHHHHHHH-TTESEEEEESSGGGHHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--hHHHHHHHh-hcCCEEEEecCCcchHH
Confidence 578999999998888666554 4477755544 44566666778877 33 333322221 27999999999987777
Q ss_pred HHHhccccCCEEEE
Q 027664 122 PLIGLLKSQGKLVL 135 (220)
Q Consensus 122 ~~~~~l~~~G~~v~ 135 (220)
.+..+++.|-.+..
T Consensus 78 ~~~~~l~~g~~v~~ 91 (120)
T PF01408_consen 78 IAKKALEAGKHVLV 91 (120)
T ss_dssp HHHHHHHTTSEEEE
T ss_pred HHHHHHHcCCEEEE
Confidence 78888877765443
No 371
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.05 E-value=0.0028 Score=55.48 Aligned_cols=77 Identities=22% Similarity=0.360 Sum_probs=52.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc--------------------chHHHHHHcCCCEEEcCCC-HH-
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAVERLGADSFLVSRD-QD- 98 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~--------------------~~~~~~~~~g~~~~~~~~~-~~- 98 (220)
..+++|+|+|+|+.|+.++..+...|.+|+++...+. +.....+.+|++...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 3588999999999999999999999999998886542 0122235667654433211 11
Q ss_pred HHHHhcCCccEEEEcCCCc
Q 027664 99 EMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 99 ~~~~~~~~~d~v~d~~g~~ 117 (220)
.+.....+||.||.++|..
T Consensus 405 ~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 405 SLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 1223334799999999864
No 372
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0037 Score=48.30 Aligned_cols=72 Identities=22% Similarity=0.312 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE-EEcCCCHHHHHHh-------cCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~-------~~~~d~v~d 112 (220)
.+++++|.|+ |.+|..+++.+...|++|++++++.++.... .+... ..|..+.+.+++. .+.+|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999997 9999999988888899999999886543221 23322 2455555444332 236899999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9985
No 373
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=97.05 E-value=0.0085 Score=47.60 Aligned_cols=99 Identities=17% Similarity=0.220 Sum_probs=69.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~-~g~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 118 (220)
+...++.|+|+|..+.+-++.++. ++. +|.+.+++++..+.+++.+......+....+..++...+.|+|+-|+...+
T Consensus 128 ~da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~ 207 (330)
T COG2423 128 KDASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTE 207 (330)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCC
Confidence 556788999999999998887765 677 899999999888777655433221111122223455568999999998764
Q ss_pred cHHHHHhccccCCEEEEeCCCC
Q 027664 119 PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 119 ~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.-...+.+++|-++..+|...
T Consensus 208 -Pil~~~~l~~G~hI~aiGad~ 228 (330)
T COG2423 208 -PVLKAEWLKPGTHINAIGADA 228 (330)
T ss_pred -CeecHhhcCCCcEEEecCCCC
Confidence 223446788899999998643
No 374
>PRK08328 hypothetical protein; Provisional
Probab=97.04 E-value=0.0031 Score=47.75 Aligned_cols=34 Identities=35% Similarity=0.621 Sum_probs=29.1
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
.+.+|+|+|+|++|..+++.+...|. ++++++..
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999 77777644
No 375
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.04 E-value=0.021 Score=46.32 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=47.7
Q ss_pred CCCCEEEEEcc-chhHHH--HHHHHHHCCCeEEEEeCCcc--c-------------hHHHHHHcCCCE-E--EcCCCHHH
Q 027664 41 KPGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSPS--K-------------KSEAVERLGADS-F--LVSRDQDE 99 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~--~~~la~~~g~~vi~~~~~~~--~-------------~~~~~~~~g~~~-~--~~~~~~~~ 99 (220)
..++++||.|+ +++|++ +++.+ ..|++++++....+ + ..+..+..|... . .|..+.+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 45688999997 899999 56666 88998888774221 1 233344556432 2 24444433
Q ss_pred HH----Hh---cCCccEEEEcCCCc
Q 027664 100 MQ----AA---MGTMDGIIDTVSAV 117 (220)
Q Consensus 100 ~~----~~---~~~~d~v~d~~g~~ 117 (220)
+. .+ .+++|+++++++.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 22 22 24799999998875
No 376
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.04 E-value=0.0051 Score=47.35 Aligned_cols=76 Identities=14% Similarity=0.217 Sum_probs=49.6
Q ss_pred CCCCEEEEEcc-c--hhHHHHHHHHHHCCCeEEEEeCCcc---chHHHHHHcCCCE--EEcCCCHHHHHHh-------cC
Q 027664 41 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADS--FLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g--~~G~~~~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~-------~~ 105 (220)
..|+.++|.|+ + ++|.++++.+...|++|+.+.+++. ..+++.+..|... ..|..+++.++++ .+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35788999997 4 7999999888788999998877632 2223333334322 2466665444332 13
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
.+|++++++|.
T Consensus 86 ~iDilVnnag~ 96 (260)
T PRK06603 86 SFDFLLHGMAF 96 (260)
T ss_pred CccEEEEcccc
Confidence 69999998873
No 377
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.04 E-value=0.02 Score=39.70 Aligned_cols=96 Identities=16% Similarity=0.096 Sum_probs=69.3
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 100 (220)
.+|++.......++..+---.|++++|+|- ..+|.-++.++...|++|+.+...... +
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~---------------------l 65 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQ---------------------L 65 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcC---------------------H
Confidence 466666666666666653357999999996 789999999999999999988754321 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
++.....|+++-++|.+..++ -+.+++|-.++.+|...
T Consensus 66 ~~~v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 66 QSKVHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK 103 (140)
T ss_pred HHHHhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence 223346789999999875433 45688888888877544
No 378
>PRK06436 glycerate dehydrogenase; Provisional
Probab=97.03 E-value=0.011 Score=46.54 Aligned_cols=85 Identities=19% Similarity=0.294 Sum_probs=61.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc--
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-- 119 (220)
.|+++.|+|-|.+|..+++.++.+|.+|++.+++... .+.... .. .+++.....|+|+.+++....
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~--~~---~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSI--YM---EPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCcccc--cC---CHHHHHhhCCEEEECCCCCchhh
Confidence 5789999999999999999999999999999886421 122211 11 234444578999988875321
Q ss_pred ---HHHHHhccccCCEEEEeCC
Q 027664 120 ---LMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (220)
-...++.|+++..++.++-
T Consensus 189 ~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1356788899888888764
No 379
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.02 E-value=0.0052 Score=47.06 Aligned_cols=75 Identities=16% Similarity=0.279 Sum_probs=49.4
Q ss_pred CCCCEEEEEccc---hhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC---C-EEEcCCCHHHHHHh-------cCC
Q 027664 41 KPGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---D-SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~g---~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~---~-~~~~~~~~~~~~~~-------~~~ 106 (220)
-.+++++|.|++ ++|.++++.+...|++|+.+.+++ +..+..+++.. . ...|..+.+.++++ .+.
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK 83 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 357899999964 899999988888899999988763 33333333321 1 12355554433322 246
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++++|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998874
No 380
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.02 E-value=0.035 Score=44.10 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=69.7
Q ss_pred CCCCEEEEEccchhHHHHHHHHHH-CCC-eEEEEeCCccchHHHHHHc---CCCEEEcCCCHHHHHHhcCCccEEEEcCC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~-~g~-~vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
+..+++.|+|+|..+...++.+.. +.. +|.+..++.++.+.+++.+ +.+.... +..++...+.|+|+-|++
T Consensus 126 ~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~----~~~~~av~~ADIV~taT~ 201 (315)
T PRK06823 126 QHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTT----LDAAEVAHAANLIVTTTP 201 (315)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEE----CCHHHHhcCCCEEEEecC
Confidence 566788999999999888876554 556 8999999998877665444 3332211 224455568999998887
Q ss_pred CcccHHHHHhccccCCEEEEeCCCCCC-CCCCch
Q 027664 116 AVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAF 148 (220)
Q Consensus 116 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~ 148 (220)
....+- -.+.+++|-++..+|..... .+++..
T Consensus 202 s~~P~~-~~~~l~~G~hi~~iGs~~p~~~Eld~~ 234 (315)
T PRK06823 202 SREPLL-QAEDIQPGTHITAVGADSPGKQELDAE 234 (315)
T ss_pred CCCcee-CHHHcCCCcEEEecCCCCcccccCCHH
Confidence 654321 23467888899999875533 455543
No 381
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0039 Score=47.80 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=51.2
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCC---EEEcCCCHHHHHHhc-------CC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAAM-------GT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~~-------~~ 106 (220)
..++++||.|+ |++|..+++.+...|++|+++++++++. .+.+. .+.. ...|..+.+.+.+.. ++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR 83 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 35679999997 8999999988888899999998887654 33232 2322 223445544333221 37
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999984
No 382
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0045 Score=48.10 Aligned_cols=75 Identities=19% Similarity=0.266 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCC----C-EEEcCCCHHHHHH---h---cCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA----D-SFLVSRDQDEMQA---A---MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~----~-~~~~~~~~~~~~~---~---~~~ 106 (220)
.++++||.|+ |.+|..++..+...|++|++++++.+......+. .+. . ...|..+.+.+++ . .++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 3568999997 9999999988888899999999887655444222 221 1 1235555544332 2 236
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|+++.++|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999875
No 383
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0047 Score=47.76 Aligned_cols=72 Identities=22% Similarity=0.322 Sum_probs=49.4
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCCE---EEcCCCHHHHHHh-------cCCccEE
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~-------~~~~d~v 110 (220)
+++|.|+ |++|..+++.+...|.+|++++++.++.+.+.+.+ +.+. ..|..+.+.+.+. .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899997 99999999888888999999998877655443332 2221 1244444333322 2479999
Q ss_pred EEcCCC
Q 027664 111 IDTVSA 116 (220)
Q Consensus 111 ~d~~g~ 116 (220)
|.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999885
No 384
>PLN03075 nicotianamine synthase; Provisional
Probab=97.00 E-value=0.0073 Score=47.16 Aligned_cols=97 Identities=16% Similarity=0.135 Sum_probs=63.3
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHC--CCeEEEEeCCccchHHHHHHc----CCCEE--EcCCCHHHHHHhcCCccEEEE
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL----GADSF--LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~--g~~vi~~~~~~~~~~~~~~~~----g~~~~--~~~~~~~~~~~~~~~~d~v~d 112 (220)
.+.++|+-+|+|+.|+.++.+++.+ +.+++.++.+++..+.+.+.+ |...- +...+........++||+||-
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~ 201 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFL 201 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEE
Confidence 4779999999999999888887654 348999999988766654433 21111 111111111111348999986
Q ss_pred cCC------C-cccHHHHHhccccCCEEEEeC
Q 027664 113 TVS------A-VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 113 ~~g------~-~~~~~~~~~~l~~~G~~v~~g 137 (220)
.+- . ...++.+.+.|++||.++.=.
T Consensus 202 ~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 202 AALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred ecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 641 1 224678889999999998754
No 385
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.00 E-value=0.0052 Score=50.36 Aligned_cols=76 Identities=21% Similarity=0.296 Sum_probs=53.0
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH------HHHHHc-CCCEE-EcCCCHHHHHHhcC----Cc
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS------EAVERL-GADSF-LVSRDQDEMQAAMG----TM 107 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~------~~~~~~-g~~~~-~~~~~~~~~~~~~~----~~ 107 (220)
..+.+|||.|+ |.+|..+++.+...|.+|++++++..+.. ...... +++.+ .|..+.+.+.+... ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 46789999997 99999999988888999999998764321 111112 33333 35566666655433 69
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+||+|++.
T Consensus 138 D~Vi~~aa~ 146 (390)
T PLN02657 138 DVVVSCLAS 146 (390)
T ss_pred cEEEECCcc
Confidence 999999874
No 386
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=97.00 E-value=0.017 Score=40.57 Aligned_cols=96 Identities=19% Similarity=0.310 Sum_probs=54.4
Q ss_pred EEEEEccchhHHHHHHHHHH-CCCeEEEEeCC--ccchHHHHH---HcCC---CE-------EEcC--------CCHHHH
Q 027664 45 HVGVVGLGGLGHVAVKFAKA-MGVKVTVISTS--PSKKSEAVE---RLGA---DS-------FLVS--------RDQDEM 100 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~-~g~~vi~~~~~--~~~~~~~~~---~~g~---~~-------~~~~--------~~~~~~ 100 (220)
+|.|+|.|.+|..+++.+.. .+.+++++... .+....+.+ ..|. +. .++. .++..+
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~ 81 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL 81 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence 57899999999999887764 46677776653 212222222 1121 11 1111 111222
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.+-.-++|+|+||+|.-.....+...+..|-+-|.++.+.
T Consensus 82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~ 121 (149)
T smart00846 82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPA 121 (149)
T ss_pred cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCC
Confidence 2111289999999987544566667887775666655443
No 387
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.00 E-value=0.017 Score=49.18 Aligned_cols=88 Identities=23% Similarity=0.315 Sum_probs=64.6
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcc---
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 118 (220)
.|+++.|+|.|.+|..+++.++.+|.+|++.++... .+.. ..+|+..+ + +.++....|+|+-+++...
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~-~~~g~~~~----~---l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYIS-PERA-AQLGVELV----S---LDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCC-hhHH-HhcCCEEE----c---HHHHHhhCCEEEEccCCChHhh
Confidence 478999999999999999999999999999987643 2222 34565432 2 4444557899998887532
Q ss_pred -cH-HHHHhccccCCEEEEeCC
Q 027664 119 -PL-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~ 138 (220)
.+ ...+..|+++..++.++-
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 22 456788999998888764
No 388
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.99 E-value=0.0046 Score=47.38 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=50.3
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----C---CC-EEEcCCCHHHHHHh-------cCC
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----G---AD-SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g---~~-~~~~~~~~~~~~~~-------~~~ 106 (220)
++++||.|+ |.+|..+++.+...|++|+.++++..+.+...+.+ + .. ...|..+.+.+.++ .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568999997 89999999888888999999998876554443322 2 11 11244454433322 147
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|+++++.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 389
>PRK09135 pteridine reductase; Provisional
Probab=96.99 E-value=0.0055 Score=46.51 Aligned_cols=75 Identities=16% Similarity=0.212 Sum_probs=49.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc-hHHHHHHc----C--CC-EEEcCCCHHHHHHhc-------C
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERL----G--AD-SFLVSRDQDEMQAAM-------G 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~-~~~~~~~~----g--~~-~~~~~~~~~~~~~~~-------~ 105 (220)
.++++||.|+ |.+|..+++.+...|++|++++++..+ .+.+.+.+ + .. ...|..+.+.+.++. +
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999997 999999998888889999999886432 33322211 1 11 123555554443322 3
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
++|++|.++|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 390
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0052 Score=48.05 Aligned_cols=76 Identities=24% Similarity=0.292 Sum_probs=50.7
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc---------cchHHHHHHc---CCCE---EEcCCCHHHHHHh-
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAVERL---GADS---FLVSRDQDEMQAA- 103 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~---------~~~~~~~~~~---g~~~---~~~~~~~~~~~~~- 103 (220)
..++++||.|+ +++|..+++.+...|++|++++++. ++.+.+.+.+ +... ..|..+.+.+.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 45789999997 8999999988888899999887654 3333333332 3221 1355554433322
Q ss_pred ------cCCccEEEEcCCC
Q 027664 104 ------MGTMDGIIDTVSA 116 (220)
Q Consensus 104 ------~~~~d~v~d~~g~ 116 (220)
.+.+|++++++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 2479999999875
No 391
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0076 Score=46.74 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCEE---EcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF---LVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~-------~~~~ 107 (220)
++++++|.|+ |.+|..+++.+...|++|+++.++.++...+... .+.... .|..+.+.+.++ .+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4468999997 9999999988888899999988876554433222 233221 255555444322 2378
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999875
No 392
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.99 E-value=0.004 Score=47.43 Aligned_cols=34 Identities=38% Similarity=0.639 Sum_probs=29.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCc
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~ 76 (220)
+.+|+|.|+|++|..+++.+...|. ++++++...
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 4789999999999999999999999 777776553
No 393
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.98 E-value=0.009 Score=41.16 Aligned_cols=92 Identities=20% Similarity=0.303 Sum_probs=53.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHH----------------------HHHcC-CCEEE--c-CC
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA----------------------VERLG-ADSFL--V-SR 95 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~----------------------~~~~g-~~~~~--~-~~ 95 (220)
..+|+|.|+|++|..++..+-..|+ ++++++...-....+ .+++. ...+. + .-
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999998888899 788887543221111 11111 11111 1 11
Q ss_pred CHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEE
Q 027664 96 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 134 (220)
Q Consensus 96 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 134 (220)
+++...++.+++|+||+|+.+......+.+.++..+.-+
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~ 120 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPF 120 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCE
Confidence 123344444589999999998644334444555555433
No 394
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.98 E-value=0.0056 Score=46.68 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=50.6
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHH-------HhcCCcc
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQ-------AAMGTMD 108 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~-------~~~~~~d 108 (220)
++++||.|+ |.+|..++..+...|.+|++++++.++.+.+...+ +.. ...|..+.+.+. +..+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999997 99999999888888999999999876655543322 221 113555554332 2234789
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++|.+.|.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988865
No 395
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.98 E-value=0.005 Score=46.70 Aligned_cols=74 Identities=20% Similarity=0.402 Sum_probs=49.2
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEE-eCCccchHHHHHHc---CCCE---EEcCCCHHHHHHhc-------CCc
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GADS---FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~-~~~~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~~-------~~~ 107 (220)
++++||.|+ |.+|..++..+...|++++++ .++.++...+...+ +... ..|..+.+.+.+.. +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 568999997 999999998777789999888 77765544433322 2211 13444544433322 379
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998875
No 396
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=96.97 E-value=0.0073 Score=48.00 Aligned_cols=95 Identities=14% Similarity=0.184 Sum_probs=58.8
Q ss_pred EEEEEccchhHHHHHHHHHHCC----CeEEEEeCCccch-HHHHHHcCC--------------CEEEcC--------CCH
Q 027664 45 HVGVVGLGGLGHVAVKFAKAMG----VKVTVISTSPSKK-SEAVERLGA--------------DSFLVS--------RDQ 97 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~g----~~vi~~~~~~~~~-~~~~~~~g~--------------~~~~~~--------~~~ 97 (220)
+|-|+|.|.+|..+.+.+...+ .+|+.+....+.. ...+-+++- ...++. .++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~p 80 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPTP 80 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCCh
Confidence 3678999999999999877653 5777665533221 111111110 111111 112
Q ss_pred HHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCC
Q 027664 98 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 98 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
+.+.+...++|+||+|+|.......+..+++.|++.|.++.+
T Consensus 81 ~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 81 EALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 222221238999999999887778888899999888888755
No 397
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.97 E-value=0.006 Score=48.43 Aligned_cols=74 Identities=23% Similarity=0.232 Sum_probs=52.2
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCC-CeEEEEeCCccchHHHHHHcCC-----CE-EEcCCCHHHHHHh-------cCCc
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA-----DS-FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g-~~vi~~~~~~~~~~~~~~~~g~-----~~-~~~~~~~~~~~~~-------~~~~ 107 (220)
+++++|.|+ +++|..+++.+...| .+|+.++++.++.+++.+.++. .. ..|..+.+.++++ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 578999997 899999998887889 8999999888766666555431 11 1355554433322 2369
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998874
No 398
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.96 E-value=0.0087 Score=45.75 Aligned_cols=34 Identities=41% Similarity=0.638 Sum_probs=29.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
...+|+|+|+|++|..+++.+...|. ++++++..
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999 77777654
No 399
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.96 E-value=0.0045 Score=43.09 Aligned_cols=31 Identities=42% Similarity=0.549 Sum_probs=27.0
Q ss_pred EEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
+|+|+|+|++|..+++.+...|. ++++++..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999 78877755
No 400
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.95 E-value=0.014 Score=45.26 Aligned_cols=96 Identities=16% Similarity=0.250 Sum_probs=69.8
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 100 (220)
..||+.......+...+---.|++|+|+|- ..+|.-++.++...|++|++...... .+
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~---------------------~L 189 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE---------------------NL 189 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh---------------------HH
Confidence 467776666666666553347899999996 58999999999999998888765431 23
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.+....+|+++.++|.+..+.. +.+++|..++.+|...
T Consensus 190 ~~~~~~ADIvI~Avgk~~lv~~--~~vk~GavVIDVgi~~ 227 (279)
T PRK14178 190 KAELRQADILVSAAGKAGFITP--DMVKPGATVIDVGINQ 227 (279)
T ss_pred HHHHhhCCEEEECCCcccccCH--HHcCCCcEEEEeeccc
Confidence 3444578999999997644433 3478999999998653
No 401
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.95 E-value=0.0042 Score=46.55 Aligned_cols=99 Identities=20% Similarity=0.351 Sum_probs=57.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccc-------hHHHHHHcCC-------CE--EEcC----------
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK-------KSEAVERLGA-------DS--FLVS---------- 94 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~-------~~~~~~~~g~-------~~--~~~~---------- 94 (220)
...+|+|+|.|++|.+++..+-..|+ ++..++...-. ...+....|- ++ -+|+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 34789999999999999999888899 77776643321 1111111110 00 0111
Q ss_pred CCHHHHHHhcC-CccEEEEcCCCcccHHHHHhcc-ccCCEEEEeCCCC
Q 027664 95 RDQDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLLGAPE 140 (220)
Q Consensus 95 ~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~~l-~~~G~~v~~g~~~ 140 (220)
-.++.+.++.. +||+|+||.-+-.+=-.++..+ +.+=.++.++..+
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 11344455444 7999999998764433444434 4444555554433
No 402
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=96.95 E-value=0.018 Score=45.89 Aligned_cols=88 Identities=19% Similarity=0.264 Sum_probs=61.2
Q ss_pred CCCEEEEEccchhHHHHHHHHH-HCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~-~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~- 119 (220)
.|+++.|+|-|.+|..+++.++ .+|.+|+..++.... .....++... .+ +.++....|+|.-+++-...
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~--~~~~~~~~~~----~~---l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHK--EAEERFNARY----CD---LDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCch--hhHHhcCcEe----cC---HHHHHHhCCEEEEeCCCChHH
Confidence 5789999999999999999998 899999988766421 2112344321 12 34445578999877764321
Q ss_pred ---H-HHHHhccccCCEEEEeCC
Q 027664 120 ---L-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 ---~-~~~~~~l~~~G~~v~~g~ 138 (220)
+ ...++.|+++..++.++-
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~aR 237 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAGR 237 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECCC
Confidence 1 357789999999888764
No 403
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.95 E-value=0.0085 Score=42.59 Aligned_cols=77 Identities=22% Similarity=0.449 Sum_probs=60.1
Q ss_pred CCCCEEEEEc-cchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCC---HHHHHHh-------cCCccE
Q 027664 41 KPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD---QDEMQAA-------MGTMDG 109 (220)
Q Consensus 41 ~~~~~vlI~G-~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~-------~~~~d~ 109 (220)
.+|-..||.| ++++|.+++.-+...|+.++..+.+.++-....+++|-+-++.+.+ +++++.. -+..|.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 3556678886 4999999998888889999999999998888889999887876655 3334332 136899
Q ss_pred EEEcCCCc
Q 027664 110 IIDTVSAV 117 (220)
Q Consensus 110 v~d~~g~~ 117 (220)
.++|.|..
T Consensus 87 ~vncagia 94 (260)
T KOG1199|consen 87 LVNCAGIA 94 (260)
T ss_pred eeecccee
Confidence 99999974
No 404
>PRK06487 glycerate dehydrogenase; Provisional
Probab=96.95 E-value=0.014 Score=46.40 Aligned_cols=83 Identities=18% Similarity=0.288 Sum_probs=59.4
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcc-c-
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-P- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~- 119 (220)
.|+++.|+|.|.+|..+++.++.+|.+|+...+.... . ..+ .. .+.++....|+|.-++.-.. +
T Consensus 147 ~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~~~--~-----~~~----~~---~l~ell~~sDiv~l~lPlt~~T~ 212 (317)
T PRK06487 147 EGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGRP--A-----RPD----RL---PLDELLPQVDALTLHCPLTEHTR 212 (317)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCCc--c-----ccc----cc---CHHHHHHhCCEEEECCCCChHHh
Confidence 5679999999999999999999999999988765321 0 111 11 24445556799988776421 1
Q ss_pred ---HHHHHhccccCCEEEEeCC
Q 027664 120 ---LMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (220)
=...++.|+++..++.++-
T Consensus 213 ~li~~~~~~~mk~ga~lIN~aR 234 (317)
T PRK06487 213 HLIGARELALMKPGALLINTAR 234 (317)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1457788999999888864
No 405
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.95 E-value=0.011 Score=45.91 Aligned_cols=96 Identities=15% Similarity=0.233 Sum_probs=70.2
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 100 (220)
..||+.......+...+---.|+++.|+|. |.+|.-++.++...|+.|++...... .+
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 467776666666766653357999999996 89999999999999999987722211 13
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.+.....|+|+-++|.+..+... .+++|-.++.+|...
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~ 233 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR 233 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence 33445689999999998765544 388888888887643
No 406
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.95 E-value=0.0046 Score=49.91 Aligned_cols=35 Identities=34% Similarity=0.606 Sum_probs=30.1
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCc
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~ 76 (220)
.+.+|+|+|+|++|..+++.+...|. ++++++...
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 45789999999999999999999999 787777654
No 407
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.94 E-value=0.0078 Score=46.08 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=61.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH-cCCCEE-EcCCC-HHHHHHhc-CCccEEEEcCCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER-LGADSF-LVSRD-QDEMQAAM-GTMDGIIDTVSA 116 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~g~~~~-~~~~~-~~~~~~~~-~~~d~v~d~~g~ 116 (220)
.+.++||.|+ |.+|..+++.+...|.+|+++.++.++....... .++..+ .|..+ .+.+.+.. .++|++|.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 4578999997 9999999988877899999998887654333221 123222 34444 23343434 489999988774
Q ss_pred ccc-------------HHHHHhcccc--CCEEEEeCCC
Q 027664 117 VHP-------------LMPLIGLLKS--QGKLVLLGAP 139 (220)
Q Consensus 117 ~~~-------------~~~~~~~l~~--~G~~v~~g~~ 139 (220)
... ...+++.+.. .++++.++..
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 210 1233444433 3678877654
No 408
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0071 Score=46.90 Aligned_cols=75 Identities=24% Similarity=0.345 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc-------hHHHH---HHcCCCE---EEcCCCHHHHHHh----
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAV---ERLGADS---FLVSRDQDEMQAA---- 103 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~-------~~~~~---~~~g~~~---~~~~~~~~~~~~~---- 103 (220)
.+++++|.|+ |++|..+++.+...|++|++++++.+. .+... +..+.+. ..|..+.+.+.++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 5678999997 999999998888889999999987542 11121 1233221 2455555444332
Q ss_pred ---cCCccEEEEcCCC
Q 027664 104 ---MGTMDGIIDTVSA 116 (220)
Q Consensus 104 ---~~~~d~v~d~~g~ 116 (220)
.+.+|++|+++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 1379999999875
No 409
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.93 E-value=0.0052 Score=46.43 Aligned_cols=34 Identities=38% Similarity=0.602 Sum_probs=28.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
.+.+|+|.|+|++|..++..+...|. ++++++..
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999999999 77777544
No 410
>PRK08317 hypothetical protein; Provisional
Probab=96.93 E-value=0.0068 Score=45.76 Aligned_cols=100 Identities=27% Similarity=0.358 Sum_probs=62.9
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHCC--CeEEEEeCCccchHHHHHHc---CCCEEEcCCCHHHHHHhcCCccEEEE
Q 027664 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~la~~~g--~~vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~d~v~d 112 (220)
..+.++++||.+|+|. |..+..+++..+ .+++.++.++...+.+.+.. +....+...+........+.||+|+-
T Consensus 15 ~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 93 (241)
T PRK08317 15 LAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRS 93 (241)
T ss_pred cCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEE
Confidence 3468899999999975 888888888763 58999999887665553331 11111111111111111236888874
Q ss_pred cC-----CC-cccHHHHHhccccCCEEEEeCC
Q 027664 113 TV-----SA-VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 113 ~~-----g~-~~~~~~~~~~l~~~G~~v~~g~ 138 (220)
.. .. ...+..+.++|+++|.++....
T Consensus 94 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 94 DRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred echhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 32 22 2246788899999999988754
No 411
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.92 E-value=0.0062 Score=45.82 Aligned_cols=72 Identities=19% Similarity=0.265 Sum_probs=52.5
Q ss_pred EEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE-EEcCCCHHHHHHhcC--CccEEEEcCCCc
Q 027664 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMG--TMDGIIDTVSAV 117 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~--~~d~v~d~~g~~ 117 (220)
|||.|+ |-+|..++..+...|..|+.+.++...........+... ..|..+.+.++++.+ .+|.||.+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 789997 999999999999999998888888765544433333322 245566666666554 689999999863
No 412
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.92 E-value=0.005 Score=46.56 Aligned_cols=75 Identities=19% Similarity=0.306 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCEE---EcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF---LVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~-------~~~~ 107 (220)
+++++||.|+ |.+|..+++.+...|.+|+++.+++++....... .+.+.. .|..+.+.+.+. .+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999997 9999999988888899999999987654433222 232222 355554433322 2368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|.++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999875
No 413
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0084 Score=45.90 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc-hHHHHHH---cCCC---EEEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVER---LGAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~-~~~~~~~---~g~~---~~~~~~~~~~~~~~-------~~~ 106 (220)
.++++||.|+ |++|..+++.+...|++|++++++.++ .+.+.+. .+.. ...|..+++.+++. .+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999997 899999999888899999999887542 2332222 2321 12344554433322 246
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|+++.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 414
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.90 E-value=0.0093 Score=45.81 Aligned_cols=75 Identities=15% Similarity=0.298 Sum_probs=50.4
Q ss_pred CCCEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCc--cchHHHHHHcCC--C-EEEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAVERLGA--D-SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~la~~~g~~vi~~~~~~--~~~~~~~~~~g~--~-~~~~~~~~~~~~~~-------~~~ 106 (220)
.+++++|.|+ +++|..+++.+...|++|++++++. +..+++.+.++. . ...|..+.+.++++ .++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999985 6999999988888999999988653 233444444442 1 22455555443332 247
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 415
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0063 Score=46.18 Aligned_cols=73 Identities=12% Similarity=0.130 Sum_probs=49.8
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----CCC---EEEcCCCHHHHHHh----cCCccEEE
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD---SFLVSRDQDEMQAA----MGTMDGII 111 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~----~~~~d~v~ 111 (220)
++++|.|+ |++|..+++.+...|.+|+++++++++.+...+.+ +.. ...|..+.+.+++. ...+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 47899997 99999999888888999999999887655443332 111 11244444444433 23579999
Q ss_pred EcCCC
Q 027664 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
.++|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 88774
No 416
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.89 E-value=0.0059 Score=46.94 Aligned_cols=74 Identities=18% Similarity=0.201 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCC-ccchHHHHHH----cCCC---EEEcCCCHHHHHHh-------cC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVER----LGAD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~-~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~-------~~ 105 (220)
.++++||.|+ +++|..++..+...|++|+.+.++ .++.+...+. .+.. ...|..+.+.++++ .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999997 899999999888899999887654 3333333222 2321 12355555443322 23
Q ss_pred CccEEEEcCC
Q 027664 106 TMDGIIDTVS 115 (220)
Q Consensus 106 ~~d~v~d~~g 115 (220)
.+|++++++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999886
No 417
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.89 E-value=0.014 Score=49.27 Aligned_cols=72 Identities=25% Similarity=0.277 Sum_probs=50.0
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccc----hHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
..+++|+|+|+|.+|+.++.+++..|.+|++++..+.. .....++.|.+...+.... ....+|.|+-+.|-
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----~~~~~D~Vv~s~Gi 88 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----LPEDTDLVVTSPGW 88 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----ccCCCCEEEECCCc
Confidence 45678999999999999999999999999998866531 1122345676544332211 22368999988876
Q ss_pred c
Q 027664 117 V 117 (220)
Q Consensus 117 ~ 117 (220)
+
T Consensus 89 ~ 89 (480)
T PRK01438 89 R 89 (480)
T ss_pred C
Confidence 4
No 418
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.89 E-value=0.0044 Score=50.27 Aligned_cols=34 Identities=35% Similarity=0.538 Sum_probs=30.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
.+.+|+|+|+|++|..+++.+...|. ++++++..
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999999 88887766
No 419
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.89 E-value=0.01 Score=45.45 Aligned_cols=74 Identities=27% Similarity=0.317 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCC---EEEcCCCHHHHHH----h---cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQA----A---MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~----~---~~~~ 107 (220)
.++++||.|+ |++|..+++.+...|++|+++++++. ...+.+. .+.+ ...|..+.+.+.+ . .+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999997 99999999988888999999988743 2233232 2322 2235555433322 2 2479
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|+++.++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999873
No 420
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.88 E-value=0.0073 Score=45.95 Aligned_cols=75 Identities=20% Similarity=0.299 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCE---EEcCCCHHHHHHhc-------CCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~~-------~~~ 107 (220)
+++++||.|+ |.+|..+++.+...|.+|+.++++.++..++.+. .+.+. ..|..+.+.++++. +++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 9999999998888899999998887655444332 22211 13444444443321 368
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999974
No 421
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.88 E-value=0.011 Score=49.83 Aligned_cols=84 Identities=15% Similarity=0.268 Sum_probs=56.9
Q ss_pred hhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccE
Q 027664 30 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 30 a~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~ 109 (220)
...++++.+.-..+.+++|+|+|++|.+++..+...|+++++..++.++.+.+.+.++.. .++.. .... ...+|+
T Consensus 319 ~~~~l~~~~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~---~~~~-l~~~Di 393 (477)
T PRK09310 319 LFSLLKQKNIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE---SLPE-LHRIDI 393 (477)
T ss_pred HHHHHHhcCCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh---Hhcc-cCCCCE
Confidence 344554433223578899999999999999988899999998888877766665555432 12211 1111 247899
Q ss_pred EEEcCCCcc
Q 027664 110 IIDTVSAVH 118 (220)
Q Consensus 110 v~d~~g~~~ 118 (220)
+++|++...
T Consensus 394 VInatP~g~ 402 (477)
T PRK09310 394 IINCLPPSV 402 (477)
T ss_pred EEEcCCCCC
Confidence 999997653
No 422
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.88 E-value=0.0076 Score=47.77 Aligned_cols=75 Identities=21% Similarity=0.305 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHH--Hc-C----CCEE-EcCCCHHHHHHhcCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RL-G----ADSF-LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~--~~-g----~~~~-~~~~~~~~~~~~~~~~d~v~d 112 (220)
.+.+|||.|+ |.+|..++..+...|.+|++++++.+....... .+ + ...+ .|..+.+.+.++..++|+||.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 4678999997 999999999888889999988877654222211 11 1 1111 133344455566668999999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
+++.
T Consensus 83 ~A~~ 86 (322)
T PLN02662 83 TASP 86 (322)
T ss_pred eCCc
Confidence 8863
No 423
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0045 Score=47.31 Aligned_cols=72 Identities=24% Similarity=0.291 Sum_probs=49.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC-EEEcCCCHHHHHHh-------cCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~-------~~~~d~v~d 112 (220)
.++++||.|+ |++|..+++.+...|++|++++++.++ .. ...+.. ...|..+.+.+++. .+.+|++|.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999997 999999999888889999999887643 11 111121 12355554433332 246899999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 82 ~ag~ 85 (252)
T PRK07856 82 NAGG 85 (252)
T ss_pred CCCC
Confidence 9874
No 424
>PRK06398 aldose dehydrogenase; Validated
Probab=96.88 E-value=0.0058 Score=46.98 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=49.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC-EEEcCCCHHHHHHh-------cCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~-------~~~~d~v~d 112 (220)
.|+++||.|+ |++|..++..+...|++|++++++..+.. ... ...|..+++.++++ .+.+|++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999997 89999999998889999999988764321 121 22355555443332 236999999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
+.|.
T Consensus 79 ~Ag~ 82 (258)
T PRK06398 79 NAGI 82 (258)
T ss_pred CCCC
Confidence 9874
No 425
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.88 E-value=0.0032 Score=48.96 Aligned_cols=72 Identities=19% Similarity=0.210 Sum_probs=49.1
Q ss_pred EEEEcc-chhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcC-------CCE-----EEcCCCHHHHHHhcC--CccE
Q 027664 46 VGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG-------ADS-----FLVSRDQDEMQAAMG--TMDG 109 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g-------~~~-----~~~~~~~~~~~~~~~--~~d~ 109 (220)
|||.|+ |.+|...++.+...+. ++++++.++.+...+.+++. ... +-|..+.+.+..... ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 789987 9999999987777787 89999999998888877772 111 124455667777766 9999
Q ss_pred EEEcCCCc
Q 027664 110 IIDTVSAV 117 (220)
Q Consensus 110 v~d~~g~~ 117 (220)
||.++.-.
T Consensus 81 VfHaAA~K 88 (293)
T PF02719_consen 81 VFHAAALK 88 (293)
T ss_dssp EEE-----
T ss_pred EEEChhcC
Confidence 99998753
No 426
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.87 E-value=0.005 Score=41.59 Aligned_cols=90 Identities=17% Similarity=0.169 Sum_probs=53.0
Q ss_pred EEEEEcc-chhHHHHHHHHHHC-CCeEEEEeCCcc-chHHHHHHcC----C-CEEEcCCCHHHHHHhcCCccEEEEcCCC
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPS-KKSEAVERLG----A-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~-g~~vi~~~~~~~-~~~~~~~~~g----~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
+|.|+|+ |.+|..+++++..+ ..+++.+..+.. ....+...++ . +..+...+.+ .+ .++|+||.|++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPE---EL-SDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGH---HH-TTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchh---Hh-hcCCEEEecCch
Confidence 5889996 99999999877654 556655554443 3223322222 2 2222221222 22 689999999998
Q ss_pred cccHHHHHhccccCCEEEEeCC
Q 027664 117 VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 117 ~~~~~~~~~~l~~~G~~v~~g~ 138 (220)
....+..-..+.+|-+++..+.
T Consensus 77 ~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 77 GASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp HHHHHHHHHHHHTTSEEEESSS
T ss_pred hHHHHHHHHHhhCCcEEEeCCH
Confidence 7444444555677777877754
No 427
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0089 Score=45.36 Aligned_cols=72 Identities=17% Similarity=0.061 Sum_probs=49.0
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC-CC-EEEcCCCHHHHHHhcC----CccEEEEcCC
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-AD-SFLVSRDQDEMQAAMG----TMDGIIDTVS 115 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~~~----~~d~v~d~~g 115 (220)
.+++|.|+ |++|..++..+...|++|+++++++++.+++.+... .. ...|..+.+.+++... ..|.++.++|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 56899997 999999988887889999999998776665543322 21 2245566655554432 4677766665
No 428
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.87 E-value=0.0072 Score=46.57 Aligned_cols=76 Identities=12% Similarity=0.206 Sum_probs=49.0
Q ss_pred CCCCEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCCcc---chHHHHHHcCC--CEEEcCCCHHHHHHh-------cC
Q 027664 41 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGA--DSFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 41 ~~~~~vlI~G~---g~~G~~~~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~--~~~~~~~~~~~~~~~-------~~ 105 (220)
-.++++||.|+ +++|.++++.+...|++|+++.+.+. +.+++.+..+. ....|..+.+.++++ .+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 35788999994 58999999888889999998765431 22233223332 222455555444332 24
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
++|++++++|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999999875
No 429
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.86 E-value=0.01 Score=45.85 Aligned_cols=75 Identities=13% Similarity=0.220 Sum_probs=48.4
Q ss_pred CCCEEEEEccc---hhHHHHHHHHHHCCCeEEEEeCCcc---chHHHHHHcCC--CEEEcCCCHHHHHHhc-------CC
Q 027664 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGA--DSFLVSRDQDEMQAAM-------GT 106 (220)
Q Consensus 42 ~~~~vlI~G~g---~~G~~~~~la~~~g~~vi~~~~~~~---~~~~~~~~~g~--~~~~~~~~~~~~~~~~-------~~ 106 (220)
.++++||.|++ ++|.++++.+...|++|+.+.+++. ..+++....+. ....|-.+.+.++++. +.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 57899999973 7999999888888999998877631 12222222231 1224555555443321 36
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++++|-
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999973
No 430
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0079 Score=47.56 Aligned_cols=74 Identities=22% Similarity=0.235 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc----------cchHHHHH---HcCCC---EEEcCCCHHHHHHh-
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----------SKKSEAVE---RLGAD---SFLVSRDQDEMQAA- 103 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~----------~~~~~~~~---~~g~~---~~~~~~~~~~~~~~- 103 (220)
.+++++|.|+ +++|..+++.+...|++|++++++. ++.+.+.+ ..+.. ...|..+.+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 5789999997 8999999998888999999988763 23333322 23322 12355554443322
Q ss_pred ------cCCccEEEEcC-C
Q 027664 104 ------MGTMDGIIDTV-S 115 (220)
Q Consensus 104 ------~~~~d~v~d~~-g 115 (220)
.+.+|++++++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 24699999988 5
No 431
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.85 E-value=0.0073 Score=46.84 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=54.7
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC---CC------EEEcCCCHHHHH--------H
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---AD------SFLVSRDQDEMQ--------A 102 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g---~~------~~~~~~~~~~~~--------~ 102 (220)
-.|+.+||.|+ .++|.+++..+...|++|+++.+++++.++.++.+. .. ...|..+++..+ +
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788999997 899999999999999999999999987766655432 21 223444333222 2
Q ss_pred hcCCccEEEEcCCCc
Q 027664 103 AMGTMDGIIDTVSAV 117 (220)
Q Consensus 103 ~~~~~d~v~d~~g~~ 117 (220)
+.+++|+.++..|..
T Consensus 86 ~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 86 FFGKIDILVNNAGAL 100 (270)
T ss_pred hCCCCCEEEEcCCcC
Confidence 234799999988763
No 432
>PRK00811 spermidine synthase; Provisional
Probab=96.85 E-value=0.017 Score=45.20 Aligned_cols=95 Identities=17% Similarity=0.133 Sum_probs=59.3
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCC--------C--EEEcCCCHHHHHHhcCCccE
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA--------D--SFLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~--------~--~~~~~~~~~~~~~~~~~~d~ 109 (220)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+.+.+.. . .++..+....++...+.||+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 153 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV 153 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence 4568899999864 7777777887666 899999888765555433321 0 11111112333332347999
Q ss_pred EEEcCCCc----------ccHHHHHhccccCCEEEEe
Q 027664 110 IIDTVSAV----------HPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 110 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~ 136 (220)
|+--...+ +.++.+.+.|+++|.++.-
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 97433211 2246778999999999874
No 433
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0083 Score=44.93 Aligned_cols=72 Identities=22% Similarity=0.291 Sum_probs=51.1
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC-EEEcCCCHHHHHHh----cC-CccEEEEcCCC
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA----MG-TMDGIIDTVSA 116 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~----~~-~~d~v~d~~g~ 116 (220)
++++|.|+ |.+|..+++.+...|++|+.++++.+..+++ +..+.. ...|..+.+.++++ .+ ++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL-QALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH-HhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46889997 9999999987777899999999887665555 334443 23455555544443 22 69999998875
No 434
>PLN02366 spermidine synthase
Probab=96.85 E-value=0.014 Score=46.07 Aligned_cols=96 Identities=19% Similarity=0.178 Sum_probs=57.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCC-C--------EEEcCCCHHHHHHh-cCCccE
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA-D--------SFLVSRDQDEMQAA-MGTMDG 109 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~-~--------~~~~~~~~~~~~~~-~~~~d~ 109 (220)
...++|||+|+|. |..+..++++.+. +|++++.+++-.+.+.+.++. . .++..+..+.+++. .+.||+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 5678999999875 6666778888766 788888776533333222321 0 01111112234443 247999
Q ss_pred EEEcCCCc----------ccHHHHHhccccCCEEEEeC
Q 027664 110 IIDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 110 v~d~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (220)
||--...+ +.++.+.++|+++|.++.-+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 87433221 23677889999999997643
No 435
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.85 E-value=0.0065 Score=46.89 Aligned_cols=34 Identities=32% Similarity=0.603 Sum_probs=29.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCC
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~ 75 (220)
.+.+|+|+|+|++|..++..+-..|. ++++++..
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 56789999999999999999999997 88888755
No 436
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=96.84 E-value=0.0084 Score=46.40 Aligned_cols=88 Identities=14% Similarity=0.219 Sum_probs=55.5
Q ss_pred EEEEEccchhHHHHHHHHHHC-CCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 027664 45 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~ 123 (220)
+|.|+|+|.+|...++..... +.++..+...+...+...+.++.. +.-+.+.+. +...+|+|++|++.....+.+
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~~d~~~---l~~~~DvVve~t~~~~~~e~~ 78 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVVSSVDA---LPQRPDLVVECAGHAALKEHV 78 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-CeeeCCHHH---hccCCCEEEECCCHHHHHHHH
Confidence 688999999999998776654 567666664433333332333221 111222232 334799999999987666777
Q ss_pred HhccccCCEEEEe
Q 027664 124 IGLLKSQGKLVLL 136 (220)
Q Consensus 124 ~~~l~~~G~~v~~ 136 (220)
..++..|-.++..
T Consensus 79 ~~aL~aGk~Vvi~ 91 (265)
T PRK13303 79 VPILKAGIDCAVI 91 (265)
T ss_pred HHHHHcCCCEEEe
Confidence 8888877666654
No 437
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.84 E-value=0.032 Score=42.44 Aligned_cols=99 Identities=15% Similarity=0.172 Sum_probs=60.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc-cchHHHH---HHcCCC---EEEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAV---ERLGAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~-~~~~~~~---~~~g~~---~~~~~~~~~~~~~~-------~~~ 106 (220)
.+.++||.|+ |.+|..+++-+...|++++...++. ++..... +..+.. ...|..+.+.+.+. .++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 3678999997 8999999988888999987766543 2222211 222322 11344444433222 247
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEeCCCC
Q 027664 107 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 107 ~d~v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+|++|.++|... ..+.+...+++.|+++.++...
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 899999998410 0123344556678999887654
No 438
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.83 E-value=0.0075 Score=48.19 Aligned_cols=91 Identities=20% Similarity=0.229 Sum_probs=62.5
Q ss_pred CEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-------CCC---EEEcCCCHHHHHHhcCCccEEEEc
Q 027664 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-------GAD---SFLVSRDQDEMQAAMGTMDGIIDT 113 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-------g~~---~~~~~~~~~~~~~~~~~~d~v~d~ 113 (220)
.+|.|+|+|.+|...+..+...|.+|++..+++++.+.+.+.. |.. .+.... ...+.....|+||-|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~---~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTA---DPEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeC---CHHHHHcCCCEEEEE
Confidence 4689999999999999988888999999999877665554321 110 011111 122333578999999
Q ss_pred CCCcccHHHHHhccccCCEEEEeCC
Q 027664 114 VSAVHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 114 ~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (220)
+... .....++.++++-.++.+..
T Consensus 82 v~~~-~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 82 VPSK-ALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred CchH-HHHHHHHhcCcCCEEEEEee
Confidence 9987 46777788877766665543
No 439
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.83 E-value=0.017 Score=46.72 Aligned_cols=93 Identities=13% Similarity=0.328 Sum_probs=64.6
Q ss_pred CEEEEEcc-chhHHHHHHHHHHC--CCeEEEEe--CCccchHHHHHHcCCCEEEcCCCH--HHHH---------------
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAVERLGADSFLVSRDQ--DEMQ--------------- 101 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~--g~~vi~~~--~~~~~~~~~~~~~g~~~~~~~~~~--~~~~--------------- 101 (220)
++|.|+|+ |++|..++...+.. ..+|++++ .+.++..+.+++++...++-.++. ..++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 46899996 99999999988765 45777775 444466777778888766543331 1121
Q ss_pred ---HhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 027664 102 ---AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 102 ---~~~~--~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (220)
++.. .+|+|+.++++...+...+.+++.|-++.+.
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 1111 5899999998866677788888777776653
No 440
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.82 E-value=0.028 Score=45.02 Aligned_cols=87 Identities=23% Similarity=0.274 Sum_probs=57.5
Q ss_pred CCCEEEEEccchhHHHHHHHH-HHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027664 42 PGMHVGVVGLGGLGHVAVKFA-KAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la-~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 120 (220)
.|.+|.|+|.|.+|..+++.+ +.+|.+|++.+++.... . .. ... .. ..+.+.....|+|+-+++.....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~--~-~~-~~~----~~--~~l~ell~~aDvIvl~lP~t~~t 214 (332)
T PRK08605 145 KDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAK--A-AT-YVD----YK--DTIEEAVEGADIVTLHMPATKYN 214 (332)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHh--H-Hh-hcc----cc--CCHHHHHHhCCEEEEeCCCCcch
Confidence 478899999999999999887 67899999888765422 1 11 111 11 12334445789999988764222
Q ss_pred -----HHHHhccccCCEEEEeCC
Q 027664 121 -----MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 121 -----~~~~~~l~~~G~~v~~g~ 138 (220)
...+..++++..++.++-
T Consensus 215 ~~li~~~~l~~mk~gailIN~sR 237 (332)
T PRK08605 215 HYLFNADLFKHFKKGAVFVNCAR 237 (332)
T ss_pred hhhcCHHHHhcCCCCcEEEECCC
Confidence 234667777777777643
No 441
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=96.81 E-value=0.022 Score=46.17 Aligned_cols=59 Identities=25% Similarity=0.314 Sum_probs=44.5
Q ss_pred cccccccchhhhhhhHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc
Q 027664 18 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 18 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~ 77 (220)
++|.+..+.+.+- .++...+.--+|.+|.|.|.|.+|..+++.+...|++|++++.+..
T Consensus 183 ~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 183 SEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred CcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 4454455444443 4444444214899999999999999999999888999999999887
No 442
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.81 E-value=0.0058 Score=48.48 Aligned_cols=71 Identities=21% Similarity=0.287 Sum_probs=52.1
Q ss_pred EEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHhcCCccEEEEcCCC
Q 027664 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
+++|.|+ |.+|..+++.+...|.+|+++++++++.... ...+...+ .|..+.+.+.+...++|+||++++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-EGLDVEIVEGDLRDPASLRKAVAGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc-ccCCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence 5899997 9999999998888899999999886643322 22344332 3555666677766789999998864
No 443
>PRK06046 alanine dehydrogenase; Validated
Probab=96.81 E-value=0.015 Score=46.50 Aligned_cols=102 Identities=23% Similarity=0.326 Sum_probs=66.0
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HCCC-eEEEEeCCccchHHHHHHc----CCCEEEcCCCHHHHHHhcCCccEEEEcC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~-~~g~-~vi~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~d~v~d~~ 114 (220)
+...++.|+|+|..|...+..+. ..++ ++.+.+++.++.+++++.+ +..... ..+ +++..+ .|+|+.|+
T Consensus 127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~~~---~~~~l~-aDiVv~aT 201 (326)
T PRK06046 127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-AED---IEEACD-CDILVTTT 201 (326)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-eCC---HHHHhh-CCEEEEec
Confidence 45678999999999988887655 4677 6777888877777776655 322111 222 233334 89999999
Q ss_pred CCcccHHHHHhccccCCEEEEeCCCCCC-CCCCch
Q 027664 115 SAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAF 148 (220)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~ 148 (220)
+....+ ...+.+++|-++..+|..... .+++..
T Consensus 202 ps~~P~-~~~~~l~~g~hV~~iGs~~p~~~El~~~ 235 (326)
T PRK06046 202 PSRKPV-VKAEWIKEGTHINAIGADAPGKQELDPE 235 (326)
T ss_pred CCCCcE-ecHHHcCCCCEEEecCCCCCccccCCHH
Confidence 875422 223456888888888875432 444443
No 444
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.80 E-value=0.002 Score=53.72 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=57.7
Q ss_pred hcCCCCCCEEE----EEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCC-EEEcCCCHHHHHHhcCCccEE
Q 027664 37 YGLDKPGMHVG----VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 37 ~~~~~~~~~vl----I~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~d~v 110 (220)
..++++|+++| |+|+ |++|.+++|+++..|++|+.+.....+.... +..+.. .++|.+......++..-
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~l~~~---- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-WGDRFGALVFDATGITDPADLKAL---- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccC-cCCcccEEEEECCCCCCHHHHHHH----
Confidence 34567888887 7775 9999999999999999999887765432211 222333 34443332111111000
Q ss_pred EEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 111 IDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 111 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
...++..++.+.++|+++.++...
T Consensus 103 ------~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 ------YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred ------HHHHHHHHHhccCCCEEEEEcccc
Confidence 013456677888899999887654
No 445
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.79 E-value=0.008 Score=45.87 Aligned_cols=73 Identities=21% Similarity=0.276 Sum_probs=50.0
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC---EEEcCCCHHHHHHh-------cCCccE
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~-------~~~~d~ 109 (220)
++++|.|+ |.+|..+++.+...|++|+.+.+++++.+.+.+.+ +.. ...|..+++.+.+. .+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36899997 99999999888889999999998866554443332 321 12355555444332 236899
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
++.+.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999875
No 446
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0094 Score=44.88 Aligned_cols=69 Identities=20% Similarity=0.167 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC-CEEEcCCCHHHHHH----hc--CCccEEEEc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQA----AM--GTMDGIIDT 113 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~----~~--~~~d~v~d~ 113 (220)
.+++++|.|+ |.+|..+++.+...|.+|+++.++.+.. ... -...|..+.+.+++ +. .++|++|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 3578999997 9999999998888899999999886531 111 12235555443332 21 268999999
Q ss_pred CCC
Q 027664 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 875
No 447
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.79 E-value=0.011 Score=44.59 Aligned_cols=74 Identities=16% Similarity=0.268 Sum_probs=58.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHH-HcCCCEE-EcCCCHHHHHHhc-CCccEEEEcCCCcc
Q 027664 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE-RLGADSF-LVSRDQDEMQAAM-GTMDGIIDTVSAVH 118 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~-~~~d~v~d~~g~~~ 118 (220)
.++|+|+|.+|..+++.+...|.+|++++.++++..++.. .+....+ .+..+++.++++. ..+|+++=++|++.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 5889999999999999999999999999999988777433 3444333 3455566777763 48999999999864
No 448
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.79 E-value=0.0064 Score=49.43 Aligned_cols=75 Identities=9% Similarity=0.104 Sum_probs=50.6
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEE-EcCCCHHHHHHhcCCccEEEEcCCC
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~d~v~d~~g~ 116 (220)
..+++|||.|+ |-+|..++..+...|.+|+++++........ ..++...+ .|..+.+.+..+..++|+||++++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~ 95 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAAD 95 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEcccc
Confidence 46789999997 9999999999998999999998754321111 01122222 2444445555555689999999853
No 449
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.78 E-value=0.02 Score=45.60 Aligned_cols=87 Identities=24% Similarity=0.213 Sum_probs=59.3
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc-
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~- 119 (220)
-.+++|.|+|.|.+|.+.++-++..|.+|++..++.++....++..|... . + ..+.....|+|+-++.....
T Consensus 15 L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~-~---s---~~eaa~~ADVVvLaVPd~~~~ 87 (330)
T PRK05479 15 IKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEV-L---T---VAEAAKWADVIMILLPDEVQA 87 (330)
T ss_pred hCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCee-C---C---HHHHHhcCCEEEEcCCHHHHH
Confidence 35788999999999999999999999999887776555544445566532 1 1 33444578999999986532
Q ss_pred --H-HHHHhccccCCEEE
Q 027664 120 --L-MPLIGLLKSQGKLV 134 (220)
Q Consensus 120 --~-~~~~~~l~~~G~~v 134 (220)
+ ......++++..++
T Consensus 88 ~V~~~~I~~~Lk~g~iL~ 105 (330)
T PRK05479 88 EVYEEEIEPNLKEGAALA 105 (330)
T ss_pred HHHHHHHHhcCCCCCEEE
Confidence 1 22334555555553
No 450
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.78 E-value=0.0091 Score=45.45 Aligned_cols=77 Identities=18% Similarity=0.282 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CCC--EE--EcCC--CHHHHH-------H
Q 027664 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SF--LVSR--DQDEMQ-------A 102 (220)
Q Consensus 40 ~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~~--~~--~~~~--~~~~~~-------~ 102 (220)
..++++++|.|+ |.+|..+++.+...|++|++++++.++...+.+.+ +.. .+ .|.. +.+.++ +
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457889999997 99999999888778999999999876544443332 221 11 2322 222222 2
Q ss_pred hcCCccEEEEcCCC
Q 027664 103 AMGTMDGIIDTVSA 116 (220)
Q Consensus 103 ~~~~~d~v~d~~g~ 116 (220)
..+.+|.+|.++|.
T Consensus 89 ~~~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QFGRLDGVLHNAGL 102 (247)
T ss_pred HhCCCCEEEECCcc
Confidence 22478999998864
No 451
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.77 E-value=0.0065 Score=53.37 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc----CCC----EEEcCCCHHHHHHh-------cC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD----SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~----g~~----~~~~~~~~~~~~~~-------~~ 105 (220)
.++++||.|+ |++|..+++.+...|++|++++++.++.+...+.+ +.. ...|..+.+.+++. .+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4688999997 99999999888888999999998876654443332 221 12355555444332 23
Q ss_pred CccEEEEcCCC
Q 027664 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~v~d~~g~ 116 (220)
++|++++++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 79999999985
No 452
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.77 E-value=0.012 Score=49.14 Aligned_cols=72 Identities=26% Similarity=0.344 Sum_probs=49.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc-chHHH---HHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCc
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA---VERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~-~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 117 (220)
.+++++|+|+|.+|+.++..+...|++|++++.... ...+. .+.+|.+... ....+ +..+++|+|+.+.|..
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~---~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE---EFLEGVDLVVVSPGVP 79 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch---hHhhcCCEEEECCCCC
Confidence 468899999988999999999999999999988752 22211 1334554322 22222 2335799999998853
No 453
>PLN02686 cinnamoyl-CoA reductase
Probab=96.76 E-value=0.0096 Score=48.37 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=51.0
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-----------CCCEE-EcCCCHHHHHHhcCCc
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----------GADSF-LVSRDQDEMQAAMGTM 107 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-----------g~~~~-~~~~~~~~~~~~~~~~ 107 (220)
..+++|||.|+ |.+|..+++.+...|.+|+++.++.++...+ +.+ +...+ .|..+.+.+.+...++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 56789999997 9999999998888899998887775544333 222 12222 2455555566666678
Q ss_pred cEEEEcCC
Q 027664 108 DGIIDTVS 115 (220)
Q Consensus 108 d~v~d~~g 115 (220)
|.||.+.+
T Consensus 130 d~V~hlA~ 137 (367)
T PLN02686 130 AGVFHTSA 137 (367)
T ss_pred cEEEecCe
Confidence 88886654
No 454
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.76 E-value=0.0064 Score=46.99 Aligned_cols=105 Identities=17% Similarity=0.066 Sum_probs=65.3
Q ss_pred hHHHhhcCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC-CEE-EcCCCHHHHHHhc-CCcc
Q 027664 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSF-LVSRDQDEMQAAM-GTMD 108 (220)
Q Consensus 32 ~~l~~~~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~-~~~-~~~~~~~~~~~~~-~~~d 108 (220)
.++... .+.++.+||=+|+|. |..+..+++..+++|+.++.++.....+.+.... +.+ +...+.... .+. +.||
T Consensus 43 ~~l~~l-~l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~-~~~~~~FD 119 (263)
T PTZ00098 43 KILSDI-ELNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKK-DFPENTFD 119 (263)
T ss_pred HHHHhC-CCCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccC-CCCCCCeE
Confidence 334444 468999999999873 6666777777788999999998766666444332 111 111111100 111 3699
Q ss_pred EEEE--cC---C--C-cccHHHHHhccccCCEEEEeCCC
Q 027664 109 GIID--TV---S--A-VHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 109 ~v~d--~~---g--~-~~~~~~~~~~l~~~G~~v~~g~~ 139 (220)
+|+- +. + . ...+..+.+.|++||+++.....
T Consensus 120 ~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~~ 158 (263)
T PTZ00098 120 MIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDYC 158 (263)
T ss_pred EEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 9885 22 1 1 12467788999999999987553
No 455
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.75 E-value=0.013 Score=44.42 Aligned_cols=75 Identities=24% Similarity=0.283 Sum_probs=48.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCC-ccchHHHHH---HcCCCEE---EcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVE---RLGADSF---LVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~-~~~~~~~~~---~~g~~~~---~~~~~~~~~~~~-------~~~ 106 (220)
.+++++|.|+ |++|..+++.+...|++|++.... ..+.....+ ..+.... .|..+.+.+.+. .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999997 999999999888889988875543 333322222 2343322 355554433322 247
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++++|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 456
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.75 E-value=0.011 Score=42.14 Aligned_cols=88 Identities=23% Similarity=0.344 Sum_probs=56.9
Q ss_pred CEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHHH-
Q 027664 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP- 122 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~- 122 (220)
.+|-++|.|.+|...++-+...|.+|++.++++++.+.+. +.|+..+ . + ..+.....|+||-|+.+......
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~~--~-s---~~e~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEVA--D-S---PAEAAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEEE--S-S---HHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhhh--h-h---hhhHhhcccceEeecccchhhhhh
Confidence 3678899999999999988888999999999988877774 3454322 1 2 22223345999999987544433
Q ss_pred -----HHhccccCCEEEEeCC
Q 027664 123 -----LIGLLKSQGKLVLLGA 138 (220)
Q Consensus 123 -----~~~~l~~~G~~v~~g~ 138 (220)
+...+.++..++.++.
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS
T ss_pred hhhhHHhhccccceEEEecCC
Confidence 3455566667776654
No 457
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.75 E-value=0.012 Score=45.61 Aligned_cols=89 Identities=16% Similarity=0.256 Sum_probs=58.4
Q ss_pred CCEEEEEccchhHHHHHHHHHH--CCCeEEEE-eCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKA--MGVKVTVI-STSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~--~g~~vi~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
.-+|-|+|.|.+|...++.+.. .+.++..+ ++++++.+.+.+.+|....+ .+.+ ++...+|+|++|++....
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~--~~~e---ell~~~D~Vvi~tp~~~h 80 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV--VPLD---QLATHADIVVEAAPASVL 80 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc--CCHH---HHhcCCCEEEECCCcHHH
Confidence 3578999999999988876654 46777654 44555555555566643222 2223 333468999999998765
Q ss_pred HHHHHhccccCCEEEEe
Q 027664 120 LMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 120 ~~~~~~~l~~~G~~v~~ 136 (220)
.+....+++.|..++..
T Consensus 81 ~e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 81 RAIVEPVLAAGKKAIVL 97 (271)
T ss_pred HHHHHHHHHcCCcEEEe
Confidence 66667777777656543
No 458
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.75 E-value=0.018 Score=42.92 Aligned_cols=102 Identities=22% Similarity=0.207 Sum_probs=67.4
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHCC--CeEEEEeCCccchHHHHH---HcCCCE-E--EcC-CCHHHHHH-hcCCc
Q 027664 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVE---RLGADS-F--LVS-RDQDEMQA-AMGTM 107 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~la~~~g--~~vi~~~~~~~~~~~~~~---~~g~~~-~--~~~-~~~~~~~~-~~~~~ 107 (220)
.+....+++|=+|.+ +|..++.+|..+. .+++.+..++++.+.+++ +.|.+. + +.. +.-+.+++ ..+.|
T Consensus 55 ~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~f 133 (219)
T COG4122 55 ARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSF 133 (219)
T ss_pred HHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCc
Confidence 335677889989864 4777778887765 388888888887655544 345533 2 221 22344444 23589
Q ss_pred cEEE-EcCCC--cccHHHHHhccccCCEEEEeCCCC
Q 027664 108 DGII-DTVSA--VHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 108 d~v~-d~~g~--~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
|+|| |+.-. +..++.+++.+++||.++.-....
T Consensus 134 DliFIDadK~~yp~~le~~~~lLr~GGliv~DNvl~ 169 (219)
T COG4122 134 DLVFIDADKADYPEYLERALPLLRPGGLIVADNVLF 169 (219)
T ss_pred cEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeeccc
Confidence 9997 55433 345889999999999998765543
No 459
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.74 E-value=0.041 Score=37.51 Aligned_cols=91 Identities=14% Similarity=0.347 Sum_probs=58.7
Q ss_pred EEEEcc-chhHHHHHHHHHHCC--CeEEEEeCC--ccchHHHHHHcCCCEEEcCCCH--HHHH-----------------
Q 027664 46 VGVVGL-GGLGHVAVKFAKAMG--VKVTVISTS--PSKKSEAVERLGADSFLVSRDQ--DEMQ----------------- 101 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~la~~~g--~~vi~~~~~--~~~~~~~~~~~g~~~~~~~~~~--~~~~----------------- 101 (220)
|.|.|+ |++|..+.++.+.+. .+|+...-. -+++.+..+++....++-.++. +.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578898 999999999999876 477765543 3345555677887776644432 1121
Q ss_pred ---Hhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 027664 102 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 102 ---~~~--~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (220)
++. ..+|+++.++.+-..+.-.+..++.+-++.+.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA 120 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA 120 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence 221 27999999987766788888888877666553
No 460
>PLN02650 dihydroflavonol-4-reductase
Probab=96.74 E-value=0.014 Score=47.07 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc---CC----CEE-EcCCCHHHHHHhcCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA----DSF-LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~---g~----~~~-~~~~~~~~~~~~~~~~d~v~d 112 (220)
..++|||.|+ |.+|..++..+...|.+|++++++.+......... +. ..+ .|..+.+.+.+...++|+||.
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 4568999997 99999999988888999998888765443322111 11 111 234445556666668999999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
+++.
T Consensus 84 ~A~~ 87 (351)
T PLN02650 84 VATP 87 (351)
T ss_pred eCCC
Confidence 8863
No 461
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0098 Score=45.40 Aligned_cols=75 Identities=15% Similarity=0.194 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEE-eCCccchHHHHHHc---CCC---EEEcCCCHHHHHH----hc-----
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GAD---SFLVSRDQDEMQA----AM----- 104 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~-~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~----~~----- 104 (220)
.+.+++|.|+ |.+|..+++.+...|.+|++. .++.++.+...+.+ +.. ...|..+.+.+.+ ..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999997 999999998888889988775 45554443333332 221 1235555443322 11
Q ss_pred ----CCccEEEEcCCC
Q 027664 105 ----GTMDGIIDTVSA 116 (220)
Q Consensus 105 ----~~~d~v~d~~g~ 116 (220)
.++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 258999999875
No 462
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.74 E-value=0.016 Score=44.29 Aligned_cols=75 Identities=23% Similarity=0.242 Sum_probs=48.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc-hHHHHHHcCCCE---EEcCCCHHHHHHh-------cCCccE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~-~~~~~~~~g~~~---~~~~~~~~~~~~~-------~~~~d~ 109 (220)
.|+++||.|+ |++|..+++.+...|++|+.++..... .....+.++... ..|-.+.+.++++ .+++|+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999997 899999999888889999887654321 111112333221 2344454433322 237999
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
+++++|.
T Consensus 89 li~~Ag~ 95 (253)
T PRK08993 89 LVNNAGL 95 (253)
T ss_pred EEECCCC
Confidence 9999975
No 463
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.74 E-value=0.016 Score=49.90 Aligned_cols=73 Identities=25% Similarity=0.291 Sum_probs=57.3
Q ss_pred CEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEE-cCCCHHHHHHhc-CCccEEEEcCCCc
Q 027664 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAV 117 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~-~~~d~v~d~~g~~ 117 (220)
++++|.|.|.+|..+++.++..|.++++++.++++.+++ ++.|...++ |..+++.+++.. +.+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-RERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCCh
Confidence 689999999999999999999999999999998887777 567765554 444455555543 4899888887765
No 464
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.74 E-value=0.0094 Score=45.92 Aligned_cols=75 Identities=16% Similarity=0.279 Sum_probs=49.3
Q ss_pred CCCEEEEEcc---chhHHHHHHHHHHCCCeEEEEeCC---ccchHHHHHHcCCC--EEEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTS---PSKKSEAVERLGAD--SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~la~~~g~~vi~~~~~---~~~~~~~~~~~g~~--~~~~~~~~~~~~~~-------~~~ 106 (220)
.++++||.|+ +++|.++++.+...|++|+.+.+. .++.+++.++++.. ...|..+++.++++ .+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999994 589999998888889999887543 23334444444432 22455555444332 247
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++++++|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 465
>PLN02214 cinnamoyl-CoA reductase
Probab=96.73 E-value=0.015 Score=46.73 Aligned_cols=76 Identities=24% Similarity=0.271 Sum_probs=52.2
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchH-HHHHHcC-----CCEE-EcCCCHHHHHHhcCCccEEEE
Q 027664 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS-EAVERLG-----ADSF-LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~-~~~~~~g-----~~~~-~~~~~~~~~~~~~~~~d~v~d 112 (220)
.++++|||.|+ |.+|..+++.+...|.+|++++++.++.. ...+.+. ...+ .|..+.+.+.+...++|+||.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 35678999997 99999999988888999999988765321 1111221 1111 244455556666668999999
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
+++.
T Consensus 88 ~A~~ 91 (342)
T PLN02214 88 TASP 91 (342)
T ss_pred ecCC
Confidence 9875
No 466
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.73 E-value=0.01 Score=45.17 Aligned_cols=75 Identities=20% Similarity=0.305 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEE-eCCccchHHHHHH---cCCCE---EEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~-~~~~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~-------~~~ 106 (220)
.+.+++|.|+ |.+|..++..+...|++|++. .++.++.+++.+. .+... ..|..+++.+.++ .++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 999999999888889988764 4554444333222 23321 1344454433322 236
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 467
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.73 E-value=0.0096 Score=50.71 Aligned_cols=72 Identities=22% Similarity=0.266 Sum_probs=51.5
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHH-hcCCccEEEEcCCCc
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA-AMGTMDGIIDTVSAV 117 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~d~v~d~~g~~ 117 (220)
.+++++|.|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+ ..+ .....|++++|++-.
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~---~~~~~~~~~diiINtT~vG 450 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLAD---LENFHPEEGMILANTTSVG 450 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhH---hhhhccccCeEEEecccCC
Confidence 467899999999999999999899999999988887777776666532 222211 111 123578999887643
No 468
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.73 E-value=0.013 Score=44.35 Aligned_cols=34 Identities=44% Similarity=0.627 Sum_probs=29.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCc
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~ 76 (220)
+.+|+|+|+|++|..++..+-..|. +++.++...
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 4679999999999999998888899 888777553
No 469
>PRK05855 short chain dehydrogenase; Validated
Probab=96.72 E-value=0.0077 Score=51.72 Aligned_cols=75 Identities=23% Similarity=0.249 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.+.++||.|+ |++|..+++.+...|.+|++++++.++.+++.+. .|.. ...|..+.+.+.++ .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 9999999988888899999999987766554333 2321 12355555444332 2369
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++++++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999985
No 470
>PRK07069 short chain dehydrogenase; Validated
Probab=96.72 E-value=0.011 Score=45.02 Aligned_cols=71 Identities=18% Similarity=0.298 Sum_probs=47.8
Q ss_pred EEEEcc-chhHHHHHHHHHHCCCeEEEEeCC-ccchHHHHHHcC----CC----EEEcCCCHHHHHHh-------cCCcc
Q 027664 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERLG----AD----SFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~-~~~~~~~~~~~g----~~----~~~~~~~~~~~~~~-------~~~~d 108 (220)
++|.|+ |.+|..+++.+...|++|+++.++ .++.+++.+.+. .. ...|..+.+.+++. .+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 788987 999999998888889999999987 544444433332 11 12355554443322 24789
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (251)
T PRK07069 82 VLVNNAGV 89 (251)
T ss_pred EEEECCCc
Confidence 99999874
No 471
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=96.71 E-value=0.014 Score=46.02 Aligned_cols=75 Identities=25% Similarity=0.367 Sum_probs=55.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHH--HHHHcC-CC---EEE--cCCCHHHHHHhcCCccEEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE--AVERLG-AD---SFL--VSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~--~~~~~g-~~---~~~--~~~~~~~~~~~~~~~d~v~d 112 (220)
.+..|+|.|+ |-+|...+..+..+|.+|.+++++++.... .++++. +. .++ |-.+++...+..+|.|.||.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 5788999998 999999999999999999999999886322 234554 21 111 33345556666779999998
Q ss_pred cCCC
Q 027664 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++..
T Consensus 85 ~Asp 88 (327)
T KOG1502|consen 85 TASP 88 (327)
T ss_pred eCcc
Confidence 8765
No 472
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.70 E-value=0.021 Score=44.33 Aligned_cols=96 Identities=20% Similarity=0.244 Sum_probs=70.2
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 100 (220)
..||+..+....+...+---.|++++|+|- ..+|.-++.++...|+.|++...... .+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~l 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------NL 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------hH
Confidence 467776666666666653357999999996 78999999999999999987643211 13
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.+.....|+++-++|.+..+. -+.+++|..++.+|...
T Consensus 196 ~~~~~~ADIvI~AvG~p~~i~--~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 196 AELTKQADILIVAVGKPKLIT--ADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeccc
Confidence 344457899999999886433 45678898999998654
No 473
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.70 E-value=0.028 Score=43.88 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=70.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-C---CCEEEcCCCHHHHHHhc---------CCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-G---ADSFLVSRDQDEMQAAM---------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-g---~~~~~~~~~~~~~~~~~---------~~~ 107 (220)
.++-|+|.|+ ++.|..++.-+...|..|++.+.+++.-+.+.... . -+..+|..+++.+++.. ++.
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 5566999998 99999999988899999999998877655554443 1 14456777766554432 267
Q ss_pred cEEEEcCCCcc--------------------------cHHHHHhcccc-CCEEEEeCCCCCCCCC
Q 027664 108 DGIIDTVSAVH--------------------------PLMPLIGLLKS-QGKLVLLGAPEKPLEL 145 (220)
Q Consensus 108 d~v~d~~g~~~--------------------------~~~~~~~~l~~-~G~~v~~g~~~~~~~~ 145 (220)
-.+++++|-.. .....+.++++ .||+|.++...+....
T Consensus 108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~ 172 (322)
T KOG1610|consen 108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL 172 (322)
T ss_pred eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence 78888887320 01233445555 5999999887764433
No 474
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.70 E-value=0.016 Score=44.86 Aligned_cols=86 Identities=13% Similarity=0.188 Sum_probs=54.5
Q ss_pred EEEEEccchhHHHHHHHHHHC--CCeEEE-EeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027664 45 HVGVVGLGGLGHVAVKFAKAM--GVKVTV-ISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~--g~~vi~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 121 (220)
++.|+|+|.+|...++..... +.+++. .+++.++.+.+.+.++.. .+ .+. +++...+|+|++|++.....+
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~-~~--~~~---~ell~~~DvVvi~a~~~~~~~ 76 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAK-AC--LSI---DELVEDVDLVVECASVNAVEE 76 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCe-eE--CCH---HHHhcCCCEEEEcCChHHHHH
Confidence 588999999999888766554 466554 455555555555555542 21 222 233357999999998765555
Q ss_pred HHHhccccCCEEEEe
Q 027664 122 PLIGLLKSQGKLVLL 136 (220)
Q Consensus 122 ~~~~~l~~~G~~v~~ 136 (220)
.+..+++.|-.++..
T Consensus 77 ~~~~al~~Gk~Vvv~ 91 (265)
T PRK13304 77 VVPKSLENGKDVIIM 91 (265)
T ss_pred HHHHHHHcCCCEEEE
Confidence 666677765555543
No 475
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.013 Score=44.93 Aligned_cols=74 Identities=19% Similarity=0.327 Sum_probs=49.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCC---EEEcCCCHHHHHHh-------cCCc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |.+|..+++.+...|++|+.+.++... ....+. .+.. ...|..+.+.++++ .+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999997 999999998888889999999887642 222122 2322 12355554443332 2378
Q ss_pred cEEEEcCCC
Q 027664 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~v~d~~g~ 116 (220)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999999884
No 476
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.70 E-value=0.026 Score=37.57 Aligned_cols=90 Identities=19% Similarity=0.281 Sum_probs=59.9
Q ss_pred EEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEE-cCCCHHHHHHhc-CCccEEEEcCCCcccHHH-
Q 027664 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHPLMP- 122 (220)
Q Consensus 46 vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~-~~~d~v~d~~g~~~~~~~- 122 (220)
|+|.|.|.+|..+++.++..+.+|++++.++++.+.+ +..|...+. |..+++.+++.. ..++.++-+++++..-..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEEL-REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-HhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence 6788999999999999999666999999998877776 455654332 334455566553 489999988887642222
Q ss_pred --HHhccccCCEEEEe
Q 027664 123 --LIGLLKSQGKLVLL 136 (220)
Q Consensus 123 --~~~~l~~~G~~v~~ 136 (220)
..+.+.+..+++..
T Consensus 80 ~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 80 ALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHTTTSEEEEE
T ss_pred HHHHHHHCCCCeEEEE
Confidence 23333444555543
No 477
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=96.70 E-value=0.038 Score=47.13 Aligned_cols=89 Identities=26% Similarity=0.335 Sum_probs=63.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCcc---
Q 027664 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 118 (220)
.|+++.|+|-|.+|..+++.++.+|.+|++.++... .+.. ..+|...+ . .++++....|+|+-+++...
T Consensus 137 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~-~~~g~~~~---~---~l~ell~~aDvV~l~lPlt~~T~ 208 (525)
T TIGR01327 137 YGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYIS-PERA-EQLGVELV---D---DLDELLARADFITVHTPLTPETR 208 (525)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCC-hhHH-HhcCCEEc---C---CHHHHHhhCCEEEEccCCChhhc
Confidence 568999999999999999999999999999987532 1222 34554321 1 24445557899998887432
Q ss_pred -cH-HHHHhccccCCEEEEeCC
Q 027664 119 -PL-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~ 138 (220)
.+ ...++.|+++..++.++-
T Consensus 209 ~li~~~~l~~mk~ga~lIN~aR 230 (525)
T TIGR01327 209 GLIGAEELAKMKKGVIIVNCAR 230 (525)
T ss_pred cCcCHHHHhcCCCCeEEEEcCC
Confidence 12 356778888888888764
No 478
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=96.69 E-value=0.012 Score=46.21 Aligned_cols=94 Identities=22% Similarity=0.140 Sum_probs=64.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHH-HCCC-eEEEEeCCccchHHHHHHcCC-CEEEcCCCHHHHHHhc-CCccEEEEcCCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAAM-GTMDGIIDTVSA 116 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~-~~g~-~vi~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~-~~~d~v~d~~g~ 116 (220)
..+.|+|..| +-+++.++.+++ ..+. +++.++.... ..+.+.+|. +.++.|++.+ ++. ..--+++|+.|+
T Consensus 135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N--~~Fve~lg~Yd~V~~Yd~i~---~l~~~~~~v~VDfaG~ 209 (314)
T PF11017_consen 135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN--VAFVESLGCYDEVLTYDDID---SLDAPQPVVIVDFAGN 209 (314)
T ss_pred CccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc--hhhhhccCCceEEeehhhhh---hccCCCCEEEEECCCC
Confidence 4466777777 777888887777 4444 8888887754 457788985 8888886543 332 356688999999
Q ss_pred cccHHHHHhccccC-CEEEEeCCCC
Q 027664 117 VHPLMPLIGLLKSQ-GKLVLLGAPE 140 (220)
Q Consensus 117 ~~~~~~~~~~l~~~-G~~v~~g~~~ 140 (220)
......+-..+... -..+.+|..+
T Consensus 210 ~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 210 GEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred HHHHHHHHHHHhhhhhEEEEEEccC
Confidence 87666666666554 2456666544
No 479
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.69 E-value=0.017 Score=41.99 Aligned_cols=74 Identities=18% Similarity=0.290 Sum_probs=54.3
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCC--CEE---EcCCCHHHHH----Hh---cCCccE
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DSF---LVSRDQDEMQ----AA---MGTMDG 109 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~--~~~---~~~~~~~~~~----~~---~~~~d~ 109 (220)
.+..+|.|+ +++|.+..|.+...|++|.+.+.+.+.-++.++.++. ++. .|.++.+.++ +. .+.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 456778886 8999999999999999999999988777777777875 222 2344433322 22 237999
Q ss_pred EEEcCCC
Q 027664 110 IIDTVSA 116 (220)
Q Consensus 110 v~d~~g~ 116 (220)
+++|.|-
T Consensus 94 lVncAGI 100 (256)
T KOG1200|consen 94 LVNCAGI 100 (256)
T ss_pred EEEcCcc
Confidence 9999985
No 480
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.69 E-value=0.036 Score=42.93 Aligned_cols=96 Identities=15% Similarity=0.205 Sum_probs=70.0
Q ss_pred cccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHHH
Q 027664 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 100 (220)
..||+.......+...+---.|++++|+|- ..+|.=++.++...|+.|++....-.. +
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~---------------------l 195 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKN---------------------L 195 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 457766666666666553357999999996 789999999999999988877643221 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
.+.+...|+++-++|.+..+. -+.+++|-.++.+|...
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 196 KEVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeeccc
Confidence 333446799999999986443 45588999999988644
No 481
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.015 Score=43.47 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=49.6
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHc-CCCE-EEcCCCHHHHHHhcC---CccEEEEcCCC
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-GADS-FLVSRDQDEMQAAMG---TMDGIIDTVSA 116 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~---~~d~v~d~~g~ 116 (220)
+++||.|+ |.+|..++..+... .+|++++++.++.+.+.+.. +... ..|..+.+.+.+... ++|++|.++|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 57999997 99999998766655 89999999876655543333 2221 234555555555443 69999999885
No 482
>PRK14967 putative methyltransferase; Provisional
Probab=96.69 E-value=0.046 Score=41.10 Aligned_cols=93 Identities=27% Similarity=0.242 Sum_probs=58.7
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHH---HcCCCEEEcCCCHHHHHHhc-CCccEEEEcC
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE---RLGADSFLVSRDQDEMQAAM-GTMDGIIDTV 114 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~-~~~d~v~d~~ 114 (220)
++++++||-.|+|. |..+..+++. +. +++.++.++.....+.+ ..+.+..+...+.. .... +.||+|+-..
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~--~~~~~~~fD~Vi~np 109 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWA--RAVEFRPFDVVVSNP 109 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchh--hhccCCCeeEEEECC
Confidence 57889999999986 8888888775 66 99999999875544322 23332222222211 1122 3799998642
Q ss_pred CCc---------------------------ccHHHHHhccccCCEEEEe
Q 027664 115 SAV---------------------------HPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 115 g~~---------------------------~~~~~~~~~l~~~G~~v~~ 136 (220)
+.. ..+..+.+.|+++|+++.+
T Consensus 110 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 110 PYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred CCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 210 0234567899999999865
No 483
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.68 E-value=0.017 Score=43.05 Aligned_cols=98 Identities=28% Similarity=0.242 Sum_probs=59.9
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHH---cCCCEE-EcCCC-HHHHHHhcCCccEEEE
Q 027664 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF-LVSRD-QDEMQAAMGTMDGIID 112 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~---~g~~~~-~~~~~-~~~~~~~~~~~d~v~d 112 (220)
..++++.+||-+|+|. |..+..+++.. .+++.++.+++..+.+.+. ++.+.+ +...+ .+... ..+.||.|+-
T Consensus 74 l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~I~~ 150 (212)
T PRK00312 74 LELKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP-AYAPFDRILV 150 (212)
T ss_pred cCCCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC-cCCCcCEEEE
Confidence 3468899999999864 55555566553 4899999887655444333 343211 11111 11110 1146999876
Q ss_pred cCCCcccHHHHHhccccCCEEEEeCC
Q 027664 113 TVSAVHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 113 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (220)
...-......+.+.|+++|+++..-.
T Consensus 151 ~~~~~~~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 151 TAAAPEIPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred ccCchhhhHHHHHhcCCCcEEEEEEc
Confidence 55444456778899999999886543
No 484
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.68 E-value=0.006 Score=45.01 Aligned_cols=95 Identities=18% Similarity=0.167 Sum_probs=58.7
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHH---HcCCCEE-EcCCCHHHHHHhcCCccEEEEcCC
Q 027664 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
..++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+.+ ..+...+ +...+.... .+.+.||+|+....
T Consensus 28 ~~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~ 104 (197)
T PRK11207 28 VVKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVV 104 (197)
T ss_pred cCCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecc
Confidence 45678899999874 7778888875 8899999999875544432 2232211 111111111 12346999986543
Q ss_pred C--------cccHHHHHhccccCCEEEEeC
Q 027664 116 A--------VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 116 ~--------~~~~~~~~~~l~~~G~~v~~g 137 (220)
- ...+..+.+.|+++|.++.+.
T Consensus 105 ~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 105 LMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1 124667888999999965543
No 485
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.67 E-value=0.023 Score=43.01 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=48.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccc-hHHHHH---HcCCCEE---EcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVE---RLGADSF---LVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~-~~~~~~---~~g~~~~---~~~~~~~~~~~~-------~~~ 106 (220)
.++++||.|+ |.+|..++..+...|++|+++.++..+ ...... ..+.... .|..+.+.+.+. ..+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999997 999999999888889999777776543 222212 2232211 245554433322 136
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|.++.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 486
>PLN02244 tocopherol O-methyltransferase
Probab=96.67 E-value=0.013 Score=47.10 Aligned_cols=97 Identities=20% Similarity=0.190 Sum_probs=61.2
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHH---HcCCC--EEEcCCCHHHHHHhcCCccEEEEcCC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~---~~g~~--~~~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
+++++||-+|+|. |..+..+++..|++|+.++.++...+.+.+ ..+.. ..+...+...+.-..+.||+|+-.-.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~ 195 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMES 195 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCc
Confidence 6788999999874 777788888889999999999875544422 22321 11111111111001236999975332
Q ss_pred C------cccHHHHHhccccCCEEEEeCC
Q 027664 116 A------VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 116 ~------~~~~~~~~~~l~~~G~~v~~g~ 138 (220)
. ...+..+.+.|++||+++....
T Consensus 196 ~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 196 GEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred hhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1 1246778899999999998754
No 487
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.66 E-value=0.035 Score=43.15 Aligned_cols=97 Identities=21% Similarity=0.246 Sum_probs=71.2
Q ss_pred ccccchhhhhhhHHHhhcCCCCCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCHHH
Q 027664 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (220)
Q Consensus 21 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 99 (220)
..+||+.......+...+---.|++++|+|- ..+|.=++.++...|+.|++....-..
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~--------------------- 195 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN--------------------- 195 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence 3467766666666666553357999999996 789999999999999998877644221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEeCCCC
Q 027664 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 100 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (220)
+++.+..+|+++-++|.+..+. -+.+++|..++.+|...
T Consensus 196 l~~~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 196 LPSIVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYNP 234 (284)
T ss_pred HHHHHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCcc
Confidence 2333456799999999886433 56788999999998743
No 488
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.66 E-value=0.01 Score=51.63 Aligned_cols=75 Identities=20% Similarity=0.384 Sum_probs=59.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEE-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 027664 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH 118 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~-~~~d~v~d~~g~~~ 118 (220)
.++|+|.|.|.+|+.+++.++..|.++++++.++++.+.+ ++.|.+.++ |..+++.+++.. +.+|.++-|+++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~ 476 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQ 476 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHH
Confidence 3689999999999999999999999999999999887777 567765443 444555555543 48999999998864
No 489
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.66 E-value=0.0076 Score=42.73 Aligned_cols=91 Identities=19% Similarity=0.270 Sum_probs=57.1
Q ss_pred EEEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcC-----CCEEEcCC--CHHHHHHhcCCccEEEEcCCCc
Q 027664 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----ADSFLVSR--DQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g-----~~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~ 117 (220)
+|.|+|+|..|.+++..+...|.+|....++++..+.+.+.-. .+..+... -.+.+++..++.|+++-++...
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 5789999999999999999999999999999876666643221 00001000 0123445556899999999886
Q ss_pred ccHHHHHhcccc---CCEEEEe
Q 027664 118 HPLMPLIGLLKS---QGKLVLL 136 (220)
Q Consensus 118 ~~~~~~~~~l~~---~G~~v~~ 136 (220)
..+..++.+++ .+..+..
T Consensus 81 -~~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 81 -AHREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GHHHHHHHHTTTSHTT-EEEE
T ss_pred -HHHHHHHHHhhccCCCCEEEE
Confidence 45555555554 3444444
No 490
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.66 E-value=0.012 Score=44.46 Aligned_cols=73 Identities=15% Similarity=0.179 Sum_probs=46.6
Q ss_pred CEEEEEcc-chhHHHHHHHHHHCCCeEEEEeC-CccchHHHHHHc---CC--C-EEEcCCCHHHHHH-------hcCCcc
Q 027664 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERL---GA--D-SFLVSRDQDEMQA-------AMGTMD 108 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~-~~~~~~~~~~~~---g~--~-~~~~~~~~~~~~~-------~~~~~d 108 (220)
+++||.|+ |.+|..+++.+...|++++++.+ +.++.+.....+ +. . ...|..+.+.+.+ ..+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 46899997 99999999988888999988887 333333322222 21 1 1234444443322 224699
Q ss_pred EEEEcCCC
Q 027664 109 GIIDTVSA 116 (220)
Q Consensus 109 ~v~d~~g~ 116 (220)
++|.+.|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999974
No 491
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.66 E-value=0.012 Score=41.33 Aligned_cols=91 Identities=24% Similarity=0.301 Sum_probs=58.2
Q ss_pred EEEEccchhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCEEEcCCCH--------HHHHHhcCCccEEEEcCCCc
Q 027664 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQ--------DEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 46 vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~~~d~v~d~~g~~ 117 (220)
|+|+|+|.+|...+..++..|.+|..+.+.+ +.+.+ ++.|........+. .......+.+|++|-|+=..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAI-KEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHH-HHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhh-hheeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence 6899999999999988877999999999998 55554 45554322211000 00112235899999998664
Q ss_pred c---cHHHHHhccccCCEEEEeCC
Q 027664 118 H---PLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 118 ~---~~~~~~~~l~~~G~~v~~g~ 138 (220)
. .++.+...+.+...++.+-.
T Consensus 79 ~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 79 QLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp GHHHHHHHHCTGEETTEEEEEESS
T ss_pred chHHHHHHHhhccCCCcEEEEEeC
Confidence 3 23444555666667777644
No 492
>PLN02427 UDP-apiose/xylose synthase
Probab=96.65 E-value=0.014 Score=47.64 Aligned_cols=74 Identities=11% Similarity=0.118 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHC-CCeEEEEeCCccchHHHHHHcC-------CCEE-EcCCCHHHHHHhcCCccEEE
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLG-------ADSF-LVSRDQDEMQAAMGTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~-g~~vi~~~~~~~~~~~~~~~~g-------~~~~-~~~~~~~~~~~~~~~~d~v~ 111 (220)
+..+|||.|+ |-+|..+++.+... |.+|++++++.++...+. ..+ .+.+ .|..+.+.+.+...++|+||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi 91 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI 91 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence 4467999997 99999999888777 579999987765443331 111 2221 24445556666666899999
Q ss_pred EcCCC
Q 027664 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
.+++.
T Consensus 92 HlAa~ 96 (386)
T PLN02427 92 NLAAI 96 (386)
T ss_pred Ecccc
Confidence 99973
No 493
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.64 E-value=0.0095 Score=46.77 Aligned_cols=75 Identities=13% Similarity=0.225 Sum_probs=61.6
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCccchHHHHHHcCCCE-EEcCCCHHHHHHhcCCccEEEEcCCCc
Q 027664 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~~ 117 (220)
...++|+|+ |-.|.+++..++..|.+.....++..++..+...||.+. ++.-..+..++++..++++|++|+|..
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPy 82 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPY 82 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEeccccc
Confidence 345788998 999999999999999988888999999998888888633 344344677778888999999999964
No 494
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.021 Score=43.82 Aligned_cols=75 Identities=19% Similarity=0.191 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCCc-cchHHHHHH---cCCC---EEEcCCCHHHHHHh-------cCC
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~~-~~~~~~~~~---~g~~---~~~~~~~~~~~~~~-------~~~ 106 (220)
.++++||.|+ |.+|..+++.+...|++|+++.+.. ++.+.+.+. .+.. ...|..+.+.+.+. .++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 9999999988888899988776643 333333222 2332 12355554433322 246
Q ss_pred ccEEEEcCCC
Q 027664 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~v~d~~g~ 116 (220)
+|++|.++|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 8999999874
No 495
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.63 E-value=0.015 Score=44.37 Aligned_cols=74 Identities=20% Similarity=0.281 Sum_probs=47.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHCCCeEEEEeCC-ccchHHHHHHcCCCE---EEcCCCHHHHHHh-------cCC-cc
Q 027664 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGT-MD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~la~~~g~~vi~~~~~-~~~~~~~~~~~g~~~---~~~~~~~~~~~~~-------~~~-~d 108 (220)
.++++||.|+ |.+|..++..+...|++|+.+.++ .++.+.+...++... ..|..+.+.++++ .++ +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 3578999997 999999999888889999876654 333344434444211 1244454433322 133 99
Q ss_pred EEEEcCC
Q 027664 109 GIIDTVS 115 (220)
Q Consensus 109 ~v~d~~g 115 (220)
++|.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9999876
No 496
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.63 E-value=0.04 Score=34.71 Aligned_cols=34 Identities=29% Similarity=0.353 Sum_probs=27.7
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIST 74 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~ 74 (220)
-.+++++|.|+|.+|..+++.+...+. ++.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 467899999999999999999888854 6766655
No 497
>PRK10637 cysG siroheme synthase; Provisional
Probab=96.63 E-value=0.0065 Score=50.83 Aligned_cols=117 Identities=10% Similarity=-0.014 Sum_probs=71.2
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCCeEEEEeCCcc-chHHHHHHcCCCEEEcCCCHHHHHHhcCCccEEEEcCCCccc
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~~vi~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 119 (220)
-.|.+|||+|+|.++.-=++.+...|++|+++...-. ....+. ..|--..+. .+ .......++++||-|+++...
T Consensus 10 l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~-~~~~i~~~~-~~--~~~~dl~~~~lv~~at~d~~~ 85 (457)
T PRK10637 10 LRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWA-DAGMLTLVE-GP--FDESLLDTCWLAIAATDDDAV 85 (457)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-hCCCEEEEe-CC--CChHHhCCCEEEEECCCCHHH
Confidence 3678999999999998878888889999988875532 222232 222111111 11 111223588999999998754
Q ss_pred HHHHHhccccCCEEEEeCCCCCCCCCCchhhhcC-CeEEEEEe
Q 027664 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG-RKIVGGSL 161 (220)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 161 (220)
-.+.....+..|.++..........|-.+.++.+ .+++.-+.
T Consensus 86 n~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT 128 (457)
T PRK10637 86 NQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSS 128 (457)
T ss_pred hHHHHHHHHHcCcEEEECCCcccCeEEEeeEEecCCEEEEEEC
Confidence 4556666667788888766544444444433333 45554443
No 498
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.63 E-value=0.028 Score=43.64 Aligned_cols=95 Identities=21% Similarity=0.161 Sum_probs=55.8
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHCCC-eEEEEeCCccchHHHHHHcCC-C--------EEEcCCCHHHHHHhcCCccEE
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA-D--------SFLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~~g~-~--------~~~~~~~~~~~~~~~~~~d~v 110 (220)
+..++||++|+|. |..+..+++.... +++.++.+++-.+.+.+.+.. . .++..+..+.+++..+.||+|
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvI 149 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVI 149 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEE
Confidence 3456999999864 5555566666545 788888887654444332211 0 111111123333334589998
Q ss_pred EEcCC----C------cccHHHHHhccccCCEEEEe
Q 027664 111 IDTVS----A------VHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 111 ~d~~g----~------~~~~~~~~~~l~~~G~~v~~ 136 (220)
+--.. . .+.++.+.+.|+++|.++..
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence 74222 1 12356788999999999976
No 499
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.62 E-value=0.024 Score=45.26 Aligned_cols=102 Identities=17% Similarity=0.245 Sum_probs=66.9
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HCCC-eEEEEeCCccchHHHHHHc---CCCEEEcCCCHHHHHHhcCCccEEEEcCC
Q 027664 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~la~-~~g~-~vi~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~d~v~d~~g 115 (220)
+...++.|+|+|.+|...++.+. .... +|.+.+++.++.+.+++.+ |..... .. ..++...+.|+|+-|++
T Consensus 126 ~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~-~~---~~~eav~~aDiVitaT~ 201 (325)
T TIGR02371 126 KDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA-AT---DPREAVEGCDILVTTTP 201 (325)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE-eC---CHHHHhccCCEEEEecC
Confidence 55688999999999988765544 3455 8999999988877765543 322111 11 23344468999999987
Q ss_pred CcccHHHHHhccccCCEEEEeCCCCC-CCCCCc
Q 027664 116 AVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPA 147 (220)
Q Consensus 116 ~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~ 147 (220)
+...+ ...+.+++|-++..+|.... ..+++.
T Consensus 202 s~~P~-~~~~~l~~g~~v~~vGs~~p~~~Eld~ 233 (325)
T TIGR02371 202 SRKPV-VKADWVSEGTHINAIGADAPGKQELDP 233 (325)
T ss_pred CCCcE-ecHHHcCCCCEEEecCCCCcccccCCH
Confidence 65322 12346788889999987543 234443
No 500
>PRK04266 fibrillarin; Provisional
Probab=96.62 E-value=0.039 Score=41.66 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=59.5
Q ss_pred CCCCCCEEEEEccchhHHHHHHHHHHCC-CeEEEEeCCccchHHHHHH---c-CCCEEE-cCCCHHHHHHhcCCccEEEE
Q 027664 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVER---L-GADSFL-VSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~la~~~g-~~vi~~~~~~~~~~~~~~~---~-g~~~~~-~~~~~~~~~~~~~~~d~v~d 112 (220)
.+++|++||=.|+|+ |..+..+++..+ .+|++++.+++..+.+.+. . +...+. |..++.....+.+.+|+++-
T Consensus 69 ~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~~ 147 (226)
T PRK04266 69 PIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIYQ 147 (226)
T ss_pred CCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEEE
Confidence 478999999999864 556666777664 4899999998655444222 1 222221 11111111122346999985
Q ss_pred cCCCcc----cHHHHHhccccCCEEEEe
Q 027664 113 TVSAVH----PLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 113 ~~g~~~----~~~~~~~~l~~~G~~v~~ 136 (220)
-...+. .+..+.+.|++||+++..
T Consensus 148 d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 148 DVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred CCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 444321 256778899999999985
Done!