BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027665
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUG3|ITPK2_ARATH Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidopsis thaliana
GN=ITPK2 PE=2 SV=2
Length = 353
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/219 (85%), Positives = 206/219 (94%)
Query: 1 MLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHE 60
MLQCVADMNLS+S G+V VP+QLVI++DASSIP+ V AGL LPLVAKPLVADGSAKSHE
Sbjct: 130 MLQCVADMNLSDSNGRVGVPKQLVIKKDASSIPEAVNNAGLRLPLVAKPLVADGSAKSHE 189
Query: 61 LSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAG 120
LSLAYDQ+SL KLEPPLVLQEFVNHGGVLFKVYIVGEAI+VVRRFSLPDV++++L SAG
Sbjct: 190 LSLAYDQHSLLKLEPPLVLQEFVNHGGVLFKVYIVGEAIRVVRRFSLPDVSRRELPKSAG 249
Query: 121 VFRFPRVSCAAASADDADLDPCVAELPPRPLLERLAKELRRQLGLRLFNLDIIREHGTRD 180
VFRFPRVSCAAASADDADLDP +AELPPRPLLERLAKELRR LGLRLFNLDIIREHGTRD
Sbjct: 250 VFRFPRVSCAAASADDADLDPSIAELPPRPLLERLAKELRRGLGLRLFNLDIIREHGTRD 309
Query: 181 QFYVIDINYFPGYGKMPEYEHIFTDFLLSLTQSRYKKKS 219
+FYVIDINYFPGYGKMPEYEH+FTDFLLS+ QS+ KK++
Sbjct: 310 RFYVIDINYFPGYGKMPEYEHVFTDFLLSVVQSQCKKRA 348
>sp|O81893|ITPK3_ARATH Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana
GN=ITPK3 PE=2 SV=3
Length = 391
Score = 271 bits (694), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 180/219 (82%)
Query: 1 MLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHE 60
MLQ +AD+ LS+ G + VP+Q+V+ +D+++ D V++AGL PLVAKPL DG+AKSH+
Sbjct: 170 MLQGMADLKLSDCSGSLFVPKQMVVLKDSAASADAVVEAGLKFPLVAKPLWIDGTAKSHQ 229
Query: 61 LSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAG 120
L LAYD+ SL +L+PPLVLQEFVNHGGV+FKV++VG+ IKV+RRFSLP+V+ + + G
Sbjct: 230 LYLAYDRRSLAELDPPLVLQEFVNHGGVMFKVFVVGDVIKVMRRFSLPNVSNCEKAKVDG 289
Query: 121 VFRFPRVSCAAASADDADLDPCVAELPPRPLLERLAKELRRQLGLRLFNLDIIREHGTRD 180
VF+FPRVS AAASAD+ADLDP VAELPP+P LE L KELR LGLRLFN+D+IREHG+++
Sbjct: 290 VFQFPRVSSAAASADNADLDPRVAELPPKPFLEALVKELRSLLGLRLFNIDMIREHGSKN 349
Query: 181 QFYVIDINYFPGYGKMPEYEHIFTDFLLSLTQSRYKKKS 219
FYVIDINYFPGYGK+P+YE +F DF +L Q +YKK+
Sbjct: 350 VFYVIDINYFPGYGKLPDYEQVFVDFFQNLAQVKYKKRQ 388
>sp|Q84Y01|ITPK1_MAIZE Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2
SV=1
Length = 342
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 142/219 (64%), Gaps = 10/219 (4%)
Query: 1 MLQCVADMN-LSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSH 59
MLQ V++++ ++ +P Q+V+ DA+++ D L A L PL+AKPLVADG+AKSH
Sbjct: 108 MLQVVSELDHAADQDSTFGIPSQVVV-YDAAALADFGLLAALRFPLIAKPLVADGTAKSH 166
Query: 60 ELSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSA 119
++SL Y + L KL PPLVLQEFVNHGGV+FKVY+VG + V+R SLPDV+ +D +++
Sbjct: 167 KMSLVYHREGLGKLRPPLVLQEFVNHGGVIFKVYVVGGHVTCVKRRSLPDVSPEDDASAQ 226
Query: 120 GVFRFPRVS------CAAASADDADLDPCVAELPPRPLLERLAKELRRQLGLRLFNLDII 173
G F +VS A + L+ V +PP + ++A LRR LGL+LFN D+I
Sbjct: 227 GSVSFSQVSNLPTERTAEEYYGEKSLEDAV--VPPAAFINQIAGGLRRALGLQLFNFDMI 284
Query: 174 REHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFLLSLTQ 212
R+ D++ VIDINYFPGY KMP YE + TDF +
Sbjct: 285 RDVRAGDRYLVIDINYFPGYAKMPGYETVLTDFFWEMVH 323
>sp|Q9SBA5|ITPK1_ARATH Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidopsis thaliana
GN=ITPK1 PE=2 SV=1
Length = 319
Score = 181 bits (459), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 136/222 (61%), Gaps = 11/222 (4%)
Query: 1 MLQCVADMNLSNSYG-KVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSH 59
ML+ + + S + VP Q+V+ D+S + L P++AKPL ADGSAKSH
Sbjct: 98 MLEVITQLRFPVSDSERFGVPEQVVV-MDSSVLSGGGALGELKFPVIAKPLDADGSAKSH 156
Query: 60 ELSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSA 119
++ L YDQ +K L+ P+VLQEFVNHGGV+FKVY+VG+ +K V+R SLPD++++ + TS
Sbjct: 157 KMFLIYDQEGMKILKAPIVLQEFVNHGGVIFKVYVVGDHVKCVKRRSLPDISEEKIGTSK 216
Query: 120 GVFRFPRVSCAAASAD-------DADLDPCVAELPPRPLLERLAKELRRQLGLRLFNLDI 172
G F ++S A D D L+ E+PP L LAK +R +GL LFN D+
Sbjct: 217 GSLPFSQISNLTAQEDKNIEYGEDRSLEKV--EMPPLSFLTDLAKAMRESMGLNLFNFDV 274
Query: 173 IREHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFLLSLTQSR 214
IR+ +++ +IDINYFPGY KMP YE + T+F + +
Sbjct: 275 IRDAKDANRYLIIDINYFPGYAKMPSYEPVLTEFFWDMVTKK 316
>sp|Q7ZU91|ITPK1_DANRE Inositol-tetrakisphosphate 1-kinase OS=Danio rerio GN=itpk1 PE=2
SV=2
Length = 396
Score = 116 bits (291), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 38 KAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGE 97
K G+T P + KP VA G+ SHE+++ + + LK ++PP VLQ F+NH VL+KV++VGE
Sbjct: 147 KHGITFPFICKPQVAHGT-NSHEMAIIFSEEDLKDIKPPCVLQSFINHNAVLYKVFVVGE 205
Query: 98 AIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAEL--PPRPLLERL 155
A VV+R S+ + A F VS +S+ D V + P +++++
Sbjct: 206 AYSVVQRPSIRNFPSGPTDRRAISFNSHHVSKPESSSHLTCRDNMVGQSWKPSNEVIQKI 265
Query: 156 AKELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFLLSLTQSRY 215
+++L + LG+ LF +DII + T Q VIDIN FPGY +PE F D LLS S
Sbjct: 266 SRKLHQALGISLFGIDIIINNQT-GQHAVIDINAFPGYEGVPE----FFDDLLSHISSVL 320
Query: 216 KKKSC 220
+ + C
Sbjct: 321 QGQVC 325
>sp|Q13572|ITPK1_HUMAN Inositol-tetrakisphosphate 1-kinase OS=Homo sapiens GN=ITPK1 PE=1
SV=2
Length = 414
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 7/172 (4%)
Query: 38 KAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGE 97
K GLT P + K VA G+ SHE+++ ++Q L ++PP V+Q F+NH VL+KV++VGE
Sbjct: 147 KNGLTFPFICKTRVAHGT-NSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGE 205
Query: 98 AIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPC--VAELPPRPLLERL 155
+ VV+R SL + + + F VS +S+ +LD V E P ++ L
Sbjct: 206 SYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIREL 265
Query: 156 AKELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFL 207
++ LR+ LG+ LF +DII + T Q VIDIN FPGY + E+ FTD L
Sbjct: 266 SRALRQALGVSLFGIDIIINNQT-GQHAVIDINAFPGYEGVSEF---FTDLL 313
>sp|Q5F480|ITPK1_CHICK Inositol-tetrakisphosphate 1-kinase OS=Gallus gallus GN=ITPK1 PE=2
SV=1
Length = 407
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 7/175 (4%)
Query: 35 VVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYI 94
++ K GL P + K VA G+ SHE+++ ++Q LK + PP V+Q F+NH VL+KV++
Sbjct: 144 LIEKNGLAFPFICKTRVAHGT-NSHEMAIIFNQEGLKAVRPPCVIQSFINHNAVLYKVFV 202
Query: 95 VGEAIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPC--VAELPPRPLL 152
VGE+ VV+R SL + + + F VS +S+ LD V E P ++
Sbjct: 203 VGESYTVVKRPSLKNFSAGISDRESIFFNSHNVSKPESSSVLTALDKIEGVFERPDDDVI 262
Query: 153 ERLAKELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFL 207
++K LR+ LG+ LF +DII + T Q VIDIN FPGY + E+ FTD L
Sbjct: 263 REISKALRQALGVSLFGIDIIINNQT-GQHAVIDINAFPGYEGVSEF---FTDLL 313
>sp|Q8BYN3|ITPK1_MOUSE Inositol-tetrakisphosphate 1-kinase OS=Mus musculus GN=Itpk1 PE=2
SV=1
Length = 419
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 99/172 (57%), Gaps = 7/172 (4%)
Query: 38 KAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGE 97
+ GL P + K VA G+ SHE+++ ++Q L ++PP V+Q F+NH VL+KV++VGE
Sbjct: 147 QNGLAFPFICKTRVAHGT-NSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGE 205
Query: 98 AIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPC--VAELPPRPLLERL 155
+ VV+R SL + + + F VS +S+ +LD V E P ++ L
Sbjct: 206 SYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIREL 265
Query: 156 AKELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFL 207
++ LR+ LG+ LF +DII + T Q VID+N FPGY + E+ FTD L
Sbjct: 266 SRALRQALGVSLFGIDIIINNQT-GQHAVIDVNAFPGYEGVSEF---FTDLL 313
>sp|P0C0T1|ITPK1_BOVIN Inositol-tetrakisphosphate 1-kinase OS=Bos taurus GN=ITPK1 PE=1
SV=1
Length = 419
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query: 40 GLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGEAI 99
GL P + K VA G+ SHE+++ ++Q L ++PP V+Q F+NH VL+KV++VGE+
Sbjct: 149 GLAFPFICKTRVAHGT-NSHEMAIVFNQEGLSAIQPPCVVQNFINHNAVLYKVFVVGESY 207
Query: 100 KVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPC--VAELPPRPLLERLAK 157
VV+R SL + + + F VS +S+ LD V E P ++ L++
Sbjct: 208 TVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTALDKIEGVFERPSDEVIRELSR 267
Query: 158 ELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFL 207
LR+ LG+ LF +DII + T Q VIDIN FPGY + E+ FTD L
Sbjct: 268 ALRQALGVSLFGIDIIINNQT-GQHAVIDINAFPGYEGVSEF---FTDLL 313
>sp|Q7SY78|ITPK1_XENLA Inositol-tetrakisphosphate 1-kinase OS=Xenopus laevis GN=itpk1 PE=2
SV=1
Length = 396
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 8/192 (4%)
Query: 22 QLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKLEPPLVLQE 81
+L+ E D ++ ++ K GL PLV K VA G+ SHE+++ ++ L ++PP V+Q
Sbjct: 132 ELMAECDEDTL-KILEKNGLAFPLVCKTRVAHGT-NSHEMAIIFNPEGLWSIKPPCVIQS 189
Query: 82 FVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDP 141
F++H VL+KV++VGE+ VV R SL + + ++ F VS +S+ L+
Sbjct: 190 FISHNAVLYKVFVVGESYTVVERPSLKNFSLGASDRASIFFNSHNVSKPESSSVLTALEK 249
Query: 142 C--VAELPPRPLLERLAKELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEY 199
V E P ++ ++K LR+ LG+ LF +DII + T Q VIDIN FPGY +PE+
Sbjct: 250 VEGVFERPCDEVIRGISKALRQALGISLFGIDIIINNKT-GQHAVIDINAFPGYEGVPEF 308
Query: 200 EHIFTDFLLSLT 211
FTD L +T
Sbjct: 309 ---FTDLLNHIT 317
>sp|O80568|ITPK4_ARATH Inositol-tetrakisphosphate 1-kinase 4 OS=Arabidopsis thaliana
GN=ITPK4 PE=2 SV=2
Length = 488
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 10/166 (6%)
Query: 38 KAGLTLPLVAKPLVADGSAKSHELSLAYDQYSLKKLEPPL--VLQEFVNHGGVLFKVYIV 95
+AGL+LP + KP VA G A +H +++ + K L P+ ++QE+V+H +FK Y++
Sbjct: 305 RAGLSLPCIVKPQVACGVADAHSMAIVFRVEDFKNLNTPVPAIIQEYVDHSSRIFKFYVL 364
Query: 96 GEAIKVVRRFSLPDVTKQDLSTSA---GVFRFPRVSCAAASADDADLDPCVAELPPRPLL 152
GE I + S+P + L SA G+ S + D A+ +P V+E+ L+
Sbjct: 365 GETIFHAVKKSIP--SSSSLRKSAEENGLKPILFDSLKSLPVDSANQNP-VSEIDLE-LV 420
Query: 153 ERLAKELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPE 198
A LR++L L +F D++ + GT D ++D+NY P + ++P+
Sbjct: 421 TEAATWLRKKLDLTIFGFDVVIQEGTGDHV-IVDLNYLPSFKEVPD 465
>sp|Q9XYQ1|ITPK1_ENTHI Inositol-tetrakisphosphate 1-kinase OS=Entamoeba histolytica
GN=ITPK1 PE=1 SV=1
Length = 319
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 41 LTLPLVAKPLVADGSAKSHELSLAYDQYSLKKLEPPLVLQEFVNHGGVLFKVYIVGEAIK 100
L LP + KP A G+ +H++ + +Q + + P + Q ++NH + KV+ +G +K
Sbjct: 129 LILPFIVKPENAQGTFNAHQMKIVLEQEGIDDIHFPCLCQHYINHNNKIVKVFCIGNTLK 188
Query: 101 VVRRFSLPDVTK-------------QD-LSTSAGVFRFPRVSCAAASADDADL--DPCVA 144
R SLP+V + +D LS GV + +A+ + + DP +
Sbjct: 189 WQTRTSLPNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPILL 248
Query: 145 ELPPRPLLERLAKELRRQLGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYEHIFT 204
L + LA ++R LG++L +D I+E+ + V+D+N FP YG +++
Sbjct: 249 NLTSEAEMRDLAYKVRCALGVQLCGIDFIKENEQGNPL-VVDVNVFPSYGGKVDFDWFVE 307
Query: 205 DFLLSLTQ 212
L T+
Sbjct: 308 KVALCYTE 315
>sp|Q60HH1|TPP1_MACFA Tripeptidyl-peptidase 1 OS=Macaca fascicularis GN=TPP1 PE=2 SV=2
Length = 563
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 1 MLQCVADMNLSNSYGKVDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHE 60
++Q V+D N S YGK L +E ++ D+V + LTL +V K L+A G+ K H
Sbjct: 64 LVQAVSDPN-SPQYGKY-----LTLE----NVADLVRPSPLTLHMVQKWLLAAGAQKCHS 113
Query: 61 LSLAYD----QYSLKKLEPPLVLQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLS 116
+ + D S+++ E L EF ++ G + ++V + R + LP +
Sbjct: 114 V-ITQDFLTCWLSIRQAELLLPGAEFHHYVGGPTETHVV----RSPRPYQLPQALAPHVD 168
Query: 117 TSAGVFRFPRVS 128
G+ RFP S
Sbjct: 169 FVGGLHRFPPTS 180
>sp|Q6FRZ5|SPT5_CANGA Transcription elongation factor SPT5 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPT5 PE=3 SV=1
Length = 1010
Score = 33.1 bits (74), Expect = 1.6, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 17 VDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQY 68
++ P+Q VIE+ + +PD+ + L +P+ PL+ S KS +++L Y
Sbjct: 289 IEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPS-KSDDVALEEGSY 339
>sp|Q7SI95|LYSX_SULSO Alpha-aminoadipate--LysW ligase LysX OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=lysX
PE=1 SV=1
Length = 275
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 38/164 (23%)
Query: 41 LTLPLVAKPLVADGS-----AKSHELS-----LAYDQYSLKKLEPPLVLQEFVNHGGVLF 90
L P+V KP+ +GS AK+ L L Y ++S +K + +QEFVN
Sbjct: 114 LGYPVVIKPV--EGSWGRMVAKADNLDVLYSYLEYQEFSTQKYKDIYYIQEFVNKPNRDI 171
Query: 91 KVYIVGEAIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDADLDPCVAELPPRP 150
+++++G+ T G++R + +A A P L
Sbjct: 172 RIFVIGD------------------ETPVGIYRVNENNWRTNTALGAKAYP----LKIDE 209
Query: 151 LLERLAKELRRQLGLRLFNLDIIREHGTRDQFYVID-INYFPGY 193
L LA +++ +G +DI + +D+ Y++D +N P Y
Sbjct: 210 ELRELALKVKDIIGGFFLGIDIFED---KDRGYLVDEVNGVPEY 250
>sp|P27692|SPT5_YEAST Transcription elongation factor SPT5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPT5 PE=1 SV=1
Length = 1063
Score = 31.6 bits (70), Expect = 4.1, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 17 VDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQY 68
++ P+Q VIE+ + +PD+ + L +P+ PL+ + KS +++L Y
Sbjct: 337 IEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPN-KSDDVALEEGSY 387
>sp|Q759T6|SPT5_ASHGO Transcription elongation factor SPT5 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=SPT5 PE=3 SV=2
Length = 958
Score = 31.6 bits (70), Expect = 4.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 17 VDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQY 68
++ P+Q VIE+ + +PD+ + L +P+ PL+ S KS ++ L Y
Sbjct: 241 IEAPKQSVIEKFCNGVPDIYVNQKLLIPVQELPLLLKPS-KSDDVRLEPGSY 291
>sp|Q6CWW9|SPT5_KLULA Transcription elongation factor SPT5 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SPT5 PE=3 SV=1
Length = 1036
Score = 31.6 bits (70), Expect = 4.5, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 17 VDVPRQLVIERDASSIPDVVLKAGLTLPLVAKPLVADGSAKSHELSLAYDQY 68
++ P+Q VIE+ + +PDV L +P+ PL+ + KS E+ L Y
Sbjct: 295 IEAPKQSVIEKFVNGVPDVYSNQKLLIPVQELPLLLKPT-KSDEVRLDVGSY 345
>sp|B0BA88|NQRA_CHLTB Na(+)-translocating NADH-quinone reductase subunit A OS=Chlamydia
trachomatis serovar L2b (strain UCH-1/proctitis) GN=nqrA
PE=3 SV=1
Length = 465
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 79 LQEFVNHGGVLFKVYIVGEAIKVVRRFSLPDVTKQDLSTSAGVFRFPRVSCAAASADDAD 138
QE ++ G + K +++G+ I + +LP ++ L T+ G F + S+D+
Sbjct: 249 FQEVLSIGHLFLKGFVLGQQIVALAGSALPPSQRKYLITAKGASFFDLLPKDIFSSDEIT 308
Query: 139 LDPCVAELPPRPLLERLA-KELRRQLGLRLFNLDIIREHGTRDQFYVIDINY 189
L + PL RL KE LG+R + ++ TR+ F + + +
Sbjct: 309 L------ISGDPLTGRLCKKEENPCLGMRDHTITLLPNPKTRESFSFLRLGW 354
>sp|Q94AH6|CUL1_ARATH Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1
Length = 738
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 184 VIDINYFPGYGKMPEYEHIFTDFLLSLTQSRYKKKS 219
V+DI G G+M YE F F+L T S Y +K+
Sbjct: 173 VLDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKA 208
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,099,566
Number of Sequences: 539616
Number of extensions: 3364150
Number of successful extensions: 7663
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 7628
Number of HSP's gapped (non-prelim): 22
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)