Query 027668
Match_columns 220
No_of_seqs 133 out of 1704
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 13:23:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027668.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027668hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 9.6E-39 2.1E-43 245.6 19.0 210 1-213 126-338 (339)
2 KOG0023 Alcohol dehydrogenase, 100.0 6.8E-36 1.5E-40 223.6 18.5 215 1-216 141-358 (360)
3 KOG0024 Sorbitol dehydrogenase 100.0 1.7E-34 3.7E-39 216.5 18.6 209 2-213 131-353 (354)
4 PLN02586 probable cinnamyl alc 100.0 9E-34 1.9E-38 226.6 22.0 214 2-215 143-356 (360)
5 PLN02178 cinnamyl-alcohol dehy 100.0 3.2E-33 6.9E-38 224.3 22.2 214 2-215 137-351 (375)
6 PLN02514 cinnamyl-alcohol dehy 100.0 1.6E-32 3.5E-37 219.4 22.2 214 2-215 140-353 (357)
7 COG0604 Qor NADPH:quinone redu 100.0 5.8E-32 1.2E-36 212.1 19.4 209 2-212 102-326 (326)
8 PRK09880 L-idonate 5-dehydroge 100.0 6.8E-31 1.5E-35 209.1 19.6 207 2-212 131-343 (343)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 9E-31 1.9E-35 210.4 19.7 208 2-210 151-371 (371)
10 cd08239 THR_DH_like L-threonin 100.0 1.6E-30 3.5E-35 206.7 20.2 207 2-212 124-339 (339)
11 PLN03154 putative allyl alcoho 100.0 3.2E-30 6.9E-35 205.3 19.5 206 9-215 124-348 (348)
12 TIGR02822 adh_fam_2 zinc-bindi 100.0 5.6E-30 1.2E-34 202.5 20.2 202 2-210 126-328 (329)
13 KOG1197 Predicted quinone oxid 100.0 2.6E-30 5.7E-35 187.7 16.2 214 2-217 106-335 (336)
14 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.5E-29 3.2E-34 202.5 19.5 208 2-211 136-357 (358)
15 PLN02827 Alcohol dehydrogenase 100.0 3.7E-29 8.1E-34 201.2 21.4 209 2-212 153-376 (378)
16 TIGR03201 dearomat_had 6-hydro 100.0 2.3E-29 5.1E-34 200.7 20.0 208 2-211 121-348 (349)
17 COG1062 AdhC Zn-dependent alco 100.0 1.1E-29 2.5E-34 192.2 16.6 207 2-211 145-365 (366)
18 PLN02740 Alcohol dehydrogenase 100.0 1.5E-28 3.2E-33 198.2 20.7 207 2-211 158-380 (381)
19 KOG1198 Zinc-binding oxidoredu 100.0 1.5E-28 3.1E-33 193.2 19.5 211 1-213 110-346 (347)
20 KOG0022 Alcohol dehydrogenase, 100.0 1.3E-28 2.8E-33 184.0 17.1 207 2-211 152-374 (375)
21 TIGR02818 adh_III_F_hyde S-(hy 100.0 3.5E-28 7.5E-33 195.1 20.7 208 2-212 145-368 (368)
22 cd08296 CAD_like Cinnamyl alco 100.0 4.6E-28 1E-32 192.1 21.0 208 2-211 124-333 (333)
23 PRK10309 galactitol-1-phosphat 100.0 3.8E-28 8.3E-33 193.6 20.2 208 2-212 122-346 (347)
24 cd08277 liver_alcohol_DH_like 100.0 9.6E-28 2.1E-32 192.5 20.9 206 2-210 144-364 (365)
25 cd08295 double_bond_reductase_ 100.0 6.1E-28 1.3E-32 191.8 19.5 210 2-212 108-338 (338)
26 cd08300 alcohol_DH_class_III c 100.0 9.5E-28 2.1E-32 192.7 20.4 207 2-211 146-368 (368)
27 TIGR02825 B4_12hDH leukotriene 100.0 9.3E-28 2E-32 189.8 19.0 208 2-211 93-325 (325)
28 cd08301 alcohol_DH_plants Plan 100.0 2.7E-27 5.9E-32 190.2 21.0 206 2-210 147-368 (369)
29 cd05283 CAD1 Cinnamyl alcohol 100.0 4.2E-27 9.2E-32 186.9 21.2 208 2-211 130-337 (337)
30 cd08237 ribitol-5-phosphate_DH 100.0 6.5E-28 1.4E-32 191.7 16.5 203 2-213 122-340 (341)
31 cd08233 butanediol_DH_like (2R 100.0 1.8E-27 3.9E-32 190.1 18.8 207 2-211 134-351 (351)
32 COG1063 Tdh Threonine dehydrog 100.0 3.6E-27 7.7E-32 187.3 19.1 210 2-212 128-350 (350)
33 TIGR03366 HpnZ_proposed putati 100.0 2.6E-27 5.6E-32 183.5 16.6 189 2-192 80-280 (280)
34 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.6E-27 5.6E-32 185.8 16.6 197 2-211 108-308 (308)
35 cd08230 glucose_DH Glucose deh 100.0 9.7E-27 2.1E-31 186.1 19.1 205 2-212 128-355 (355)
36 cd08231 MDR_TM0436_like Hypoth 100.0 1.5E-26 3.3E-31 185.4 20.3 209 2-212 136-361 (361)
37 cd05284 arabinose_DH_like D-ar 100.0 2.2E-26 4.7E-31 183.1 20.5 209 2-212 126-340 (340)
38 cd08294 leukotriene_B4_DH_like 100.0 9.6E-27 2.1E-31 184.2 18.2 209 2-212 95-329 (329)
39 cd08291 ETR_like_1 2-enoyl thi 100.0 1.2E-26 2.6E-31 183.4 18.4 204 2-210 104-323 (324)
40 PRK09422 ethanol-active dehydr 99.9 8.7E-26 1.9E-30 179.4 20.8 210 2-213 123-337 (338)
41 cd08293 PTGR2 Prostaglandin re 99.9 2.4E-25 5.3E-30 177.4 21.8 210 2-212 108-345 (345)
42 cd08238 sorbose_phosphate_red 99.9 1E-25 2.2E-30 183.2 19.9 210 7-219 130-375 (410)
43 COG2130 Putative NADP-dependen 99.9 8E-26 1.7E-30 168.5 17.4 211 3-214 109-340 (340)
44 cd08246 crotonyl_coA_red croto 99.9 1.4E-25 3E-30 181.7 20.1 207 2-210 151-391 (393)
45 cd08297 CAD3 Cinnamyl alcohol 99.9 1.8E-25 4E-30 177.8 20.0 209 2-212 126-341 (341)
46 cd08240 6_hydroxyhexanoate_dh_ 99.9 1.9E-25 4.2E-30 178.3 19.5 209 2-211 135-349 (350)
47 cd08292 ETR_like_2 2-enoyl thi 99.9 2E-25 4.4E-30 176.3 18.8 207 2-211 100-324 (324)
48 TIGR02819 fdhA_non_GSH formald 99.9 5.5E-25 1.2E-29 177.6 20.9 209 2-213 140-391 (393)
49 cd08254 hydroxyacyl_CoA_DH 6-h 99.9 3.5E-25 7.5E-30 175.9 19.2 210 2-212 125-338 (338)
50 cd08274 MDR9 Medium chain dehy 99.9 4.3E-25 9.3E-30 176.3 18.7 207 2-212 138-350 (350)
51 TIGR01751 crot-CoA-red crotony 99.9 8.4E-25 1.8E-29 177.4 20.4 214 2-217 147-392 (398)
52 cd08263 Zn_ADH10 Alcohol dehyd 99.9 8.3E-25 1.8E-29 175.7 18.4 209 2-211 147-367 (367)
53 cd08260 Zn_ADH6 Alcohol dehydr 99.9 2.2E-24 4.9E-29 171.9 20.2 204 7-211 130-344 (345)
54 cd08285 NADP_ADH NADP(H)-depen 99.9 2.2E-24 4.7E-29 172.3 18.6 205 6-212 131-351 (351)
55 cd08278 benzyl_alcohol_DH Benz 99.9 2.6E-24 5.6E-29 172.7 18.9 208 2-211 146-365 (365)
56 PRK10083 putative oxidoreducta 99.9 4.9E-24 1.1E-28 169.5 20.2 209 2-214 122-339 (339)
57 cd08261 Zn_ADH7 Alcohol dehydr 99.9 4.3E-24 9.3E-29 169.7 19.7 207 2-212 122-337 (337)
58 cd05279 Zn_ADH1 Liver alcohol 99.9 3.9E-24 8.5E-29 171.6 19.4 206 2-210 143-364 (365)
59 cd08262 Zn_ADH8 Alcohol dehydr 99.9 5.8E-24 1.3E-28 169.2 20.2 207 2-211 123-341 (341)
60 PRK13771 putative alcohol dehy 99.9 3.8E-24 8.2E-29 169.8 18.8 206 2-212 123-333 (334)
61 KOG1202 Animal-type fatty acid 99.9 3.7E-25 7.9E-30 188.1 13.5 214 1-215 1511-1744(2376)
62 cd08286 FDH_like_ADH2 formalde 99.9 8.3E-24 1.8E-28 168.6 20.1 208 3-212 125-345 (345)
63 cd08290 ETR 2-enoyl thioester 99.9 5.6E-24 1.2E-28 169.3 18.4 209 2-212 106-341 (341)
64 cd08245 CAD Cinnamyl alcohol d 99.9 9.8E-24 2.1E-28 167.2 19.6 207 2-210 123-330 (330)
65 cd08244 MDR_enoyl_red Possible 99.9 1.1E-23 2.4E-28 166.3 19.6 208 2-212 103-324 (324)
66 cd05282 ETR_like 2-enoyl thioe 99.9 7.1E-24 1.5E-28 167.4 18.3 208 2-211 98-323 (323)
67 cd05285 sorbitol_DH Sorbitol d 99.9 1.5E-23 3.2E-28 167.0 20.1 205 2-210 124-341 (343)
68 cd08283 FDH_like_1 Glutathione 99.9 1.9E-23 4.1E-28 168.8 20.6 207 3-211 144-385 (386)
69 cd05278 FDH_like Formaldehyde 99.9 1.4E-23 3E-28 167.4 19.5 208 2-211 126-346 (347)
70 cd08284 FDH_like_2 Glutathione 99.9 2.1E-23 4.5E-28 166.2 20.4 202 6-211 132-343 (344)
71 PTZ00354 alcohol dehydrogenase 99.9 1.2E-23 2.6E-28 166.7 18.8 213 2-216 100-332 (334)
72 cd08242 MDR_like Medium chain 99.9 1.4E-23 3E-28 165.6 18.9 200 2-212 117-319 (319)
73 cd08235 iditol_2_DH_like L-idi 99.9 1.6E-23 3.4E-28 166.8 19.2 205 2-210 122-342 (343)
74 cd08232 idonate-5-DH L-idonate 99.9 2E-23 4.4E-28 166.0 19.7 206 2-212 127-339 (339)
75 cd08298 CAD2 Cinnamyl alcohol 99.9 2.3E-23 5E-28 165.0 19.6 201 2-210 128-329 (329)
76 cd08270 MDR4 Medium chain dehy 99.9 2.6E-23 5.6E-28 162.9 19.4 204 2-212 93-305 (305)
77 cd08256 Zn_ADH2 Alcohol dehydr 99.9 4E-23 8.7E-28 165.0 20.0 204 3-210 136-350 (350)
78 cd05280 MDR_yhdh_yhfp Yhdh and 99.9 4.9E-23 1.1E-27 162.7 20.2 209 2-212 103-325 (325)
79 cd08243 quinone_oxidoreductase 99.9 3.7E-23 8E-28 162.9 19.3 207 2-210 102-319 (320)
80 cd08279 Zn_ADH_class_III Class 99.9 4.3E-23 9.4E-28 165.5 19.9 206 2-208 142-361 (363)
81 cd08299 alcohol_DH_class_I_II_ 99.9 6E-23 1.3E-27 165.1 20.5 207 2-211 150-372 (373)
82 TIGR02817 adh_fam_1 zinc-bindi 99.9 3.2E-23 6.9E-28 164.6 18.6 206 2-211 103-334 (336)
83 TIGR02823 oxido_YhdH putative 99.9 6.7E-23 1.5E-27 161.9 20.4 208 2-211 102-322 (323)
84 KOG0025 Zn2+-binding dehydroge 99.9 5.2E-23 1.1E-27 152.4 18.1 210 2-212 120-352 (354)
85 cd08276 MDR7 Medium chain dehy 99.9 8.1E-23 1.8E-27 162.1 20.8 208 2-211 120-335 (336)
86 cd08289 MDR_yhfp_like Yhfp put 99.9 3.2E-23 7E-28 163.9 17.8 209 2-212 103-326 (326)
87 cd08259 Zn_ADH5 Alcohol dehydr 99.9 9E-23 2E-27 161.6 20.2 206 2-211 123-332 (332)
88 cd08236 sugar_DH NAD(P)-depend 99.9 5.2E-23 1.1E-27 163.9 18.5 206 2-210 121-343 (343)
89 cd08282 PFDH_like Pseudomonas 99.9 1.2E-22 2.6E-27 163.6 20.5 201 7-211 139-374 (375)
90 cd05288 PGDH Prostaglandin deh 99.9 5.1E-23 1.1E-27 162.9 17.3 208 2-210 101-329 (329)
91 cd08264 Zn_ADH_like2 Alcohol d 99.9 1E-22 2.2E-27 161.0 18.4 198 2-208 123-324 (325)
92 cd08287 FDH_like_ADH3 formalde 99.9 2.2E-22 4.7E-27 160.4 20.2 203 6-211 128-344 (345)
93 PRK10754 quinone oxidoreductas 99.9 1.5E-22 3.4E-27 160.1 18.7 207 2-211 100-326 (327)
94 cd08265 Zn_ADH3 Alcohol dehydr 99.9 3.4E-22 7.4E-27 161.4 19.5 206 2-210 156-383 (384)
95 cd08269 Zn_ADH9 Alcohol dehydr 99.9 3.9E-22 8.4E-27 156.7 18.8 204 2-210 92-311 (312)
96 cd08266 Zn_ADH_like1 Alcohol d 99.9 5.8E-22 1.3E-26 157.3 19.7 208 2-211 126-341 (342)
97 cd08249 enoyl_reductase_like e 99.9 5.1E-22 1.1E-26 157.9 19.3 208 2-212 104-339 (339)
98 cd08252 AL_MDR Arginate lyase 99.9 7.9E-22 1.7E-26 156.6 20.0 207 2-211 104-336 (336)
99 PRK05396 tdh L-threonine 3-deh 99.9 3.9E-22 8.5E-27 158.7 18.3 207 2-213 126-341 (341)
100 KOG1196 Predicted NAD-dependen 99.9 1.3E-22 2.8E-27 151.0 14.2 192 22-214 133-342 (343)
101 cd05286 QOR2 Quinone oxidoredu 99.9 7.4E-22 1.6E-26 155.1 19.3 209 2-212 96-320 (320)
102 PLN02702 L-idonate 5-dehydroge 99.9 9.8E-22 2.1E-26 157.8 20.0 206 2-211 143-363 (364)
103 TIGR00692 tdh L-threonine 3-de 99.9 1E-21 2.2E-26 156.3 19.0 206 2-212 124-340 (340)
104 cd05281 TDH Threonine dehydrog 99.9 1.2E-21 2.5E-26 156.0 19.2 206 2-212 126-341 (341)
105 cd08255 2-desacetyl-2-hydroxye 99.9 3.8E-22 8.3E-27 154.4 15.9 203 2-210 59-277 (277)
106 cd08250 Mgc45594_like Mgc45594 99.9 9.9E-22 2.2E-26 155.6 18.6 205 2-211 101-329 (329)
107 cd08234 threonine_DH_like L-th 99.9 1.7E-21 3.8E-26 154.5 19.1 204 2-210 121-333 (334)
108 cd08288 MDR_yhdh Yhdh putative 99.9 2.5E-21 5.4E-26 153.0 19.9 209 2-212 103-324 (324)
109 cd08253 zeta_crystallin Zeta-c 99.9 1.9E-21 4E-26 153.3 18.4 208 2-211 104-324 (325)
110 cd05276 p53_inducible_oxidored 99.9 2.4E-21 5.2E-26 152.4 18.2 207 2-210 99-323 (323)
111 TIGR02824 quinone_pig3 putativ 99.9 1.1E-20 2.4E-25 149.0 19.0 208 2-211 99-324 (325)
112 smart00829 PKS_ER Enoylreducta 99.9 5.7E-21 1.2E-25 148.0 17.0 205 2-209 64-287 (288)
113 cd08241 QOR1 Quinone oxidoredu 99.9 7.6E-21 1.6E-25 149.7 17.9 207 2-210 99-322 (323)
114 cd08272 MDR6 Medium chain dehy 99.9 1.1E-20 2.5E-25 149.0 18.5 205 2-212 104-326 (326)
115 cd08267 MDR1 Medium chain dehy 99.9 1.3E-20 2.9E-25 148.3 18.5 206 2-210 103-319 (319)
116 cd08258 Zn_ADH4 Alcohol dehydr 99.9 4.6E-21 1E-25 150.4 15.7 175 2-178 125-306 (306)
117 cd08248 RTN4I1 Human Reticulon 99.9 2.7E-20 5.9E-25 148.6 20.1 206 2-210 118-349 (350)
118 cd08251 polyketide_synthase po 99.9 1.7E-20 3.7E-25 146.6 17.3 205 2-210 81-303 (303)
119 cd05289 MDR_like_2 alcohol deh 99.9 2E-20 4.4E-25 146.4 17.1 201 2-209 104-308 (309)
120 cd08273 MDR8 Medium chain dehy 99.9 4.9E-20 1.1E-24 146.0 19.1 205 2-210 99-330 (331)
121 cd05195 enoyl_red enoyl reduct 99.9 4E-20 8.7E-25 143.4 18.0 206 2-210 68-293 (293)
122 cd08268 MDR2 Medium chain dehy 99.9 7.6E-20 1.6E-24 144.3 18.9 208 2-211 104-327 (328)
123 cd08247 AST1_like AST1 is a cy 99.9 7.2E-20 1.6E-24 146.4 18.9 203 7-211 115-351 (352)
124 cd05188 MDR Medium chain reduc 99.9 3.5E-20 7.6E-25 142.5 16.0 172 2-174 94-270 (271)
125 cd08271 MDR5 Medium chain dehy 99.8 1.4E-19 3E-24 142.9 17.6 207 2-211 101-324 (325)
126 cd08275 MDR3 Medium chain dehy 99.8 6.5E-19 1.4E-23 139.7 19.2 208 2-212 98-337 (337)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 6.3E-20 1.4E-24 126.2 10.9 124 53-177 1-130 (130)
128 cd00401 AdoHcyase S-adenosyl-L 99.7 2E-16 4.4E-21 126.6 13.6 175 30-214 188-378 (413)
129 PRK09424 pntA NAD(P) transhydr 99.6 2.8E-14 6.1E-19 117.2 18.4 142 40-182 162-334 (509)
130 PF13602 ADH_zinc_N_2: Zinc-bi 99.6 4.2E-16 9.1E-21 106.7 5.7 117 86-210 1-127 (127)
131 TIGR00561 pntA NAD(P) transhyd 99.1 7.6E-09 1.6E-13 85.3 15.6 121 41-162 162-313 (511)
132 PRK05476 S-adenosyl-L-homocyst 99.0 5.2E-09 1.1E-13 84.6 12.2 106 28-141 196-303 (425)
133 PRK08306 dipicolinate synthase 99.0 4.5E-08 9.7E-13 76.3 16.8 111 42-159 151-261 (296)
134 PRK11873 arsM arsenite S-adeno 99.0 5.2E-09 1.1E-13 80.9 10.8 169 39-211 74-260 (272)
135 TIGR00518 alaDH alanine dehydr 99.0 4.8E-08 1.1E-12 78.5 15.8 99 42-140 166-270 (370)
136 PLN02494 adenosylhomocysteinas 99.0 2.8E-08 6.1E-13 80.8 13.7 103 31-141 241-345 (477)
137 TIGR00936 ahcY adenosylhomocys 98.9 4.6E-08 9.9E-13 78.8 11.8 103 30-140 181-285 (406)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.8 5.3E-08 1.1E-12 76.6 10.6 108 7-119 140-251 (311)
139 PRK12771 putative glutamate sy 98.7 1.9E-08 4E-13 85.5 5.7 120 40-161 134-276 (564)
140 TIGR02853 spore_dpaA dipicolin 98.6 1.4E-06 3.1E-11 67.6 13.7 99 42-145 150-248 (287)
141 PTZ00075 Adenosylhomocysteinas 98.6 8.3E-07 1.8E-11 72.5 11.7 95 38-140 249-344 (476)
142 COG4221 Short-chain alcohol de 98.6 1.3E-06 2.7E-11 64.9 11.5 106 42-147 5-149 (246)
143 PF01488 Shikimate_DH: Shikima 98.5 3.5E-07 7.6E-12 63.0 5.6 97 41-140 10-112 (135)
144 PRK00045 hemA glutamyl-tRNA re 98.5 9.2E-07 2E-11 72.5 8.8 106 9-119 146-255 (423)
145 TIGR01035 hemA glutamyl-tRNA r 98.3 7.3E-06 1.6E-10 67.1 10.7 76 40-119 177-253 (417)
146 COG1748 LYS9 Saccharopine dehy 98.3 9.4E-06 2E-10 65.0 10.4 97 44-140 2-102 (389)
147 PRK08324 short chain dehydroge 98.2 1.1E-05 2.3E-10 70.4 10.5 99 42-140 421-560 (681)
148 PF00670 AdoHcyase_NAD: S-aden 98.2 4.8E-05 1E-09 53.4 11.6 98 38-143 18-116 (162)
149 COG2518 Pcm Protein-L-isoaspar 98.2 1.2E-05 2.7E-10 58.6 8.9 102 33-138 64-170 (209)
150 COG0686 Ald Alanine dehydrogen 98.2 1.3E-05 2.9E-10 61.4 8.9 98 44-141 169-272 (371)
151 PRK12742 oxidoreductase; Provi 98.2 3.5E-05 7.5E-10 58.1 11.4 99 42-140 5-134 (237)
152 COG0300 DltE Short-chain dehyd 98.2 2.1E-05 4.6E-10 59.8 9.9 77 41-117 4-95 (265)
153 COG3967 DltE Short-chain dehyd 98.2 8.8E-06 1.9E-10 58.8 7.4 76 42-117 4-89 (245)
154 PF13460 NAD_binding_10: NADH( 98.2 1.7E-05 3.8E-10 57.4 9.2 92 46-140 1-100 (183)
155 COG0373 HemA Glutamyl-tRNA red 98.2 8.3E-05 1.8E-09 60.0 13.1 74 41-118 176-250 (414)
156 PLN03209 translocon at the inn 98.1 4E-05 8.7E-10 64.4 11.4 78 40-117 77-170 (576)
157 cd01080 NAD_bind_m-THF_DH_Cycl 98.1 6.4E-05 1.4E-09 53.6 10.9 98 20-140 21-119 (168)
158 PF12847 Methyltransf_18: Meth 98.1 2.7E-05 5.8E-10 51.6 8.4 93 42-136 1-110 (112)
159 PF02826 2-Hacid_dh_C: D-isome 98.1 1.5E-05 3.3E-10 57.6 7.7 122 41-194 34-161 (178)
160 TIGR01470 cysG_Nterm siroheme 98.1 0.00019 4.1E-09 53.0 13.3 115 42-160 8-124 (205)
161 KOG1209 1-Acyl dihydroxyaceton 98.1 4.6E-05 1E-09 55.5 9.5 100 42-141 6-142 (289)
162 PRK05786 fabG 3-ketoacyl-(acyl 98.1 6.2E-05 1.3E-09 56.8 10.8 99 42-140 4-138 (238)
163 cd01078 NAD_bind_H4MPT_DH NADP 98.1 0.00011 2.3E-09 53.9 11.6 78 41-118 26-109 (194)
164 PRK00377 cbiT cobalt-precorrin 98.1 8.1E-05 1.8E-09 54.8 10.9 96 39-135 37-143 (198)
165 PRK06182 short chain dehydroge 98.1 9.7E-05 2.1E-09 57.1 11.7 75 42-117 2-85 (273)
166 PRK13940 glutamyl-tRNA reducta 98.0 7.1E-05 1.5E-09 61.1 10.8 76 41-119 179-255 (414)
167 KOG1205 Predicted dehydrogenas 98.0 8.2E-05 1.8E-09 57.1 10.5 107 42-148 11-160 (282)
168 PRK05993 short chain dehydroge 98.0 0.00014 3.1E-09 56.3 12.1 74 42-116 3-86 (277)
169 COG2242 CobL Precorrin-6B meth 98.0 0.00013 2.8E-09 52.2 10.6 97 40-138 32-136 (187)
170 PRK08265 short chain dehydroge 98.0 0.00015 3.2E-09 55.7 12.0 75 42-116 5-90 (261)
171 PRK06139 short chain dehydroge 98.0 0.00014 3.1E-09 57.9 11.8 76 41-116 5-94 (330)
172 TIGR01809 Shik-DH-AROM shikima 98.0 5.5E-05 1.2E-09 58.8 9.2 76 42-117 124-201 (282)
173 PRK05693 short chain dehydroge 98.0 0.00022 4.7E-09 55.1 12.4 72 44-116 2-82 (274)
174 COG0169 AroE Shikimate 5-dehyd 98.0 6.7E-05 1.5E-09 57.9 8.7 86 28-117 109-201 (283)
175 PRK06500 short chain dehydroge 97.9 0.00022 4.8E-09 54.1 11.6 75 42-116 5-90 (249)
176 PRK11705 cyclopropane fatty ac 97.9 0.00031 6.8E-09 57.0 12.8 113 22-138 147-268 (383)
177 PRK08339 short chain dehydroge 97.9 0.00028 6.1E-09 54.2 12.0 75 42-116 7-95 (263)
178 cd01065 NAD_bind_Shikimate_DH 97.9 0.00018 3.9E-09 50.6 10.1 105 32-139 8-118 (155)
179 PRK00517 prmA ribosomal protei 97.9 0.0001 2.2E-09 56.3 9.4 128 4-140 85-216 (250)
180 PRK14175 bifunctional 5,10-met 97.9 0.00019 4.1E-09 55.4 10.6 96 22-140 137-233 (286)
181 PRK07825 short chain dehydroge 97.9 0.00033 7.2E-09 54.0 12.2 75 42-116 4-88 (273)
182 PRK07576 short chain dehydroge 97.9 0.00017 3.7E-09 55.5 10.5 76 41-116 7-96 (264)
183 PRK06484 short chain dehydroge 97.9 0.00026 5.7E-09 59.9 12.3 99 42-140 268-403 (520)
184 PRK12548 shikimate 5-dehydroge 97.9 0.00017 3.7E-09 56.2 10.3 76 41-116 124-209 (289)
185 PRK07109 short chain dehydroge 97.9 0.00029 6.4E-09 56.2 11.8 75 42-116 7-95 (334)
186 TIGR01318 gltD_gamma_fam gluta 97.9 4.7E-05 1E-09 63.5 7.4 77 42-118 140-238 (467)
187 PF03435 Saccharop_dh: Sacchar 97.9 0.00012 2.5E-09 59.7 9.5 91 46-136 1-97 (386)
188 PRK07060 short chain dehydroge 97.9 0.00017 3.7E-09 54.6 9.5 76 41-116 7-87 (245)
189 PRK00258 aroE shikimate 5-dehy 97.9 0.00013 2.8E-09 56.6 8.8 110 25-136 104-220 (278)
190 PRK07814 short chain dehydroge 97.9 0.00044 9.5E-09 53.1 11.8 76 41-116 8-97 (263)
191 PRK12939 short chain dehydroge 97.8 0.00032 6.8E-09 53.3 10.9 76 41-116 5-94 (250)
192 PRK06718 precorrin-2 dehydroge 97.8 0.00092 2E-08 49.3 12.7 115 41-160 8-124 (202)
193 PRK07231 fabG 3-ketoacyl-(acyl 97.8 0.00041 8.9E-09 52.7 11.4 75 42-116 4-91 (251)
194 PRK07326 short chain dehydroge 97.8 0.00031 6.6E-09 53.0 10.5 75 42-116 5-92 (237)
195 PRK06196 oxidoreductase; Provi 97.8 0.00049 1.1E-08 54.4 12.0 75 42-116 25-109 (315)
196 PRK12549 shikimate 5-dehydroge 97.8 0.0001 2.3E-09 57.2 8.0 86 28-116 112-202 (284)
197 PRK06484 short chain dehydroge 97.8 0.00046 9.9E-09 58.4 12.5 76 41-116 3-89 (520)
198 PRK05872 short chain dehydroge 97.8 0.00015 3.3E-09 56.8 9.0 75 42-116 8-95 (296)
199 PRK08261 fabG 3-ketoacyl-(acyl 97.8 0.00038 8.3E-09 57.8 11.5 75 42-116 209-294 (450)
200 PRK08415 enoyl-(acyl carrier p 97.8 0.0006 1.3E-08 52.8 11.7 99 42-140 4-146 (274)
201 PF01262 AlaDh_PNT_C: Alanine 97.8 6.1E-05 1.3E-09 53.9 5.7 96 44-140 21-142 (168)
202 PF01135 PCMT: Protein-L-isoas 97.8 9.9E-05 2.1E-09 54.6 7.0 101 34-136 65-171 (209)
203 PRK06505 enoyl-(acyl carrier p 97.8 0.00078 1.7E-08 52.1 12.3 75 42-116 6-95 (271)
204 PF13241 NAD_binding_7: Putati 97.8 0.00026 5.7E-09 46.3 8.1 91 42-142 6-96 (103)
205 PRK06180 short chain dehydroge 97.8 0.00072 1.6E-08 52.4 12.0 76 42-117 3-89 (277)
206 PRK08618 ornithine cyclodeamin 97.8 0.0002 4.3E-09 56.8 8.9 94 41-140 125-224 (325)
207 cd01075 NAD_bind_Leu_Phe_Val_D 97.8 0.00063 1.4E-08 50.1 11.0 81 41-128 26-107 (200)
208 PRK12749 quinate/shikimate deh 97.8 0.00044 9.6E-09 53.8 10.5 86 31-116 112-206 (288)
209 PRK12809 putative oxidoreducta 97.8 0.00025 5.5E-09 61.4 10.1 77 42-118 309-407 (639)
210 PRK09242 tropinone reductase; 97.8 0.00072 1.5E-08 51.7 11.6 75 42-116 8-98 (257)
211 PRK06057 short chain dehydroge 97.8 0.00032 7E-09 53.5 9.7 75 42-116 6-89 (255)
212 PRK06719 precorrin-2 dehydroge 97.8 0.0018 3.9E-08 45.7 12.6 113 41-160 11-124 (157)
213 PRK13943 protein-L-isoaspartat 97.8 0.00049 1.1E-08 54.4 10.7 96 39-136 77-179 (322)
214 TIGR02469 CbiT precorrin-6Y C5 97.8 0.00083 1.8E-08 45.1 10.6 97 40-137 17-122 (124)
215 PRK03369 murD UDP-N-acetylmura 97.7 0.00036 7.8E-09 58.5 10.5 74 40-118 9-82 (488)
216 PRK07806 short chain dehydroge 97.7 0.00049 1.1E-08 52.3 10.3 98 42-139 5-136 (248)
217 PRK12829 short chain dehydroge 97.7 0.00031 6.8E-09 53.8 9.2 77 41-117 9-97 (264)
218 PRK12367 short chain dehydroge 97.7 0.00034 7.3E-09 53.3 9.2 75 42-116 13-89 (245)
219 PRK07832 short chain dehydroge 97.7 0.0013 2.9E-08 50.7 12.4 72 45-116 2-88 (272)
220 PRK14192 bifunctional 5,10-met 97.7 0.00081 1.8E-08 52.1 11.0 86 32-140 148-234 (283)
221 PRK14027 quinate/shikimate deh 97.7 0.00052 1.1E-08 53.3 10.0 75 41-116 125-204 (283)
222 TIGR00507 aroE shikimate 5-deh 97.7 0.00035 7.6E-09 54.0 9.0 106 28-138 102-215 (270)
223 PRK12429 3-hydroxybutyrate deh 97.7 0.0013 2.9E-08 50.1 12.2 75 42-116 3-91 (258)
224 PRK08159 enoyl-(acyl carrier p 97.7 0.0011 2.5E-08 51.2 11.8 77 40-116 7-98 (272)
225 PRK05866 short chain dehydroge 97.7 0.00028 6.1E-09 55.2 8.4 76 42-117 39-128 (293)
226 PRK13942 protein-L-isoaspartat 97.7 0.00059 1.3E-08 50.8 9.7 96 39-136 73-175 (212)
227 PRK06200 2,3-dihydroxy-2,3-dih 97.7 0.00042 9.1E-09 53.2 9.2 75 42-116 5-90 (263)
228 PRK08267 short chain dehydroge 97.7 0.00063 1.4E-08 52.1 10.2 74 44-117 2-88 (260)
229 PRK12550 shikimate 5-dehydroge 97.7 0.00042 9E-09 53.5 9.0 82 26-116 106-188 (272)
230 PRK10538 malonic semialdehyde 97.7 0.0018 4E-08 49.2 12.6 72 45-116 2-84 (248)
231 PRK06603 enoyl-(acyl carrier p 97.7 0.0013 2.9E-08 50.5 11.8 76 41-116 6-96 (260)
232 PRK07340 ornithine cyclodeamin 97.7 0.00037 8E-09 54.8 8.8 95 41-141 123-221 (304)
233 COG2230 Cfa Cyclopropane fatty 97.7 0.00023 5E-09 54.6 7.4 108 29-140 59-179 (283)
234 PRK09072 short chain dehydroge 97.6 0.0011 2.5E-08 50.8 11.1 76 42-117 4-91 (263)
235 PRK07533 enoyl-(acyl carrier p 97.6 0.0019 4.2E-08 49.4 12.3 99 42-140 9-151 (258)
236 TIGR03325 BphB_TodD cis-2,3-di 97.6 0.00062 1.3E-08 52.2 9.4 75 42-116 4-89 (262)
237 COG1052 LdhA Lactate dehydroge 97.6 0.0018 4E-08 51.2 12.1 126 41-199 144-277 (324)
238 PLN00203 glutamyl-tRNA reducta 97.6 0.00072 1.6E-08 56.8 10.2 76 42-118 265-341 (519)
239 TIGR02356 adenyl_thiF thiazole 97.6 0.00031 6.6E-09 51.9 7.2 77 42-118 20-123 (202)
240 PRK08263 short chain dehydroge 97.6 0.0019 4.1E-08 49.9 12.0 75 43-117 3-88 (275)
241 PRK04457 spermidine synthase; 97.6 0.003 6.6E-08 48.6 12.8 95 41-136 65-176 (262)
242 PRK08085 gluconate 5-dehydroge 97.6 0.0014 3.1E-08 49.9 11.1 75 42-116 8-96 (254)
243 PRK06101 short chain dehydroge 97.6 0.0016 3.6E-08 49.2 11.3 73 44-116 2-81 (240)
244 PRK06079 enoyl-(acyl carrier p 97.6 0.0016 3.5E-08 49.7 11.3 98 42-140 6-146 (252)
245 cd05311 NAD_bind_2_malic_enz N 97.6 0.0024 5.3E-08 48.0 11.8 101 31-137 13-128 (226)
246 PRK08594 enoyl-(acyl carrier p 97.6 0.0022 4.7E-08 49.2 11.9 99 42-140 6-150 (257)
247 PRK05562 precorrin-2 dehydroge 97.6 0.0053 1.2E-07 45.8 13.4 117 41-161 23-141 (223)
248 PRK06128 oxidoreductase; Provi 97.6 0.0021 4.6E-08 50.4 12.1 99 42-140 54-194 (300)
249 PRK07574 formate dehydrogenase 97.6 0.0025 5.5E-08 51.6 12.6 91 42-139 191-286 (385)
250 COG1648 CysG Siroheme synthase 97.6 0.0027 5.9E-08 47.0 11.7 118 41-162 10-129 (210)
251 PRK07062 short chain dehydroge 97.6 0.00057 1.2E-08 52.5 8.7 75 42-116 7-97 (265)
252 PF03807 F420_oxidored: NADP o 97.6 0.0015 3.2E-08 42.0 9.3 86 45-136 1-93 (96)
253 PRK07063 short chain dehydroge 97.6 0.00057 1.2E-08 52.3 8.6 75 42-116 6-96 (260)
254 PRK07424 bifunctional sterol d 97.6 0.00091 2E-08 54.6 10.0 76 42-117 177-256 (406)
255 PRK13944 protein-L-isoaspartat 97.6 0.0014 3.1E-08 48.5 10.2 97 39-137 69-173 (205)
256 PRK04148 hypothetical protein; 97.6 0.0024 5.3E-08 43.5 10.4 98 41-141 15-113 (134)
257 PF00106 adh_short: short chai 97.6 0.00055 1.2E-08 48.6 7.8 74 44-117 1-91 (167)
258 PRK13243 glyoxylate reductase; 97.5 0.0018 3.9E-08 51.6 11.3 89 42-139 149-242 (333)
259 PRK05867 short chain dehydroge 97.5 0.00063 1.4E-08 51.9 8.6 75 42-116 8-96 (253)
260 PRK14194 bifunctional 5,10-met 97.5 0.0011 2.3E-08 51.6 9.6 95 22-139 138-233 (301)
261 PLN03139 formate dehydrogenase 97.5 0.002 4.4E-08 52.1 11.5 91 42-139 198-293 (386)
262 PRK06463 fabG 3-ketoacyl-(acyl 97.5 0.0024 5.1E-08 48.8 11.6 74 42-116 6-89 (255)
263 PRK13394 3-hydroxybutyrate deh 97.5 0.0015 3.3E-08 49.9 10.6 75 42-116 6-94 (262)
264 PRK06141 ornithine cyclodeamin 97.5 0.0027 5.9E-08 50.2 12.1 95 41-140 123-222 (314)
265 PRK12481 2-deoxy-D-gluconate 3 97.5 0.0023 4.9E-08 48.9 11.3 75 42-116 7-93 (251)
266 COG3288 PntA NAD/NADP transhyd 97.5 0.0022 4.7E-08 49.5 10.7 137 41-178 162-325 (356)
267 PRK06940 short chain dehydroge 97.5 0.0018 3.9E-08 50.1 10.8 97 43-140 2-128 (275)
268 PRK07523 gluconate 5-dehydroge 97.5 0.00081 1.8E-08 51.3 8.7 76 42-117 9-98 (255)
269 PRK06398 aldose dehydrogenase; 97.5 0.0018 3.9E-08 49.6 10.5 69 42-116 5-82 (258)
270 PRK07831 short chain dehydroge 97.5 0.0013 2.7E-08 50.5 9.7 77 40-116 14-107 (262)
271 PRK05717 oxidoreductase; Valid 97.5 0.0012 2.5E-08 50.5 9.4 77 41-117 8-95 (255)
272 PRK07890 short chain dehydroge 97.5 0.00072 1.6E-08 51.6 8.2 76 41-116 3-92 (258)
273 PRK05854 short chain dehydroge 97.5 0.00075 1.6E-08 53.3 8.4 75 42-116 13-103 (313)
274 PRK06194 hypothetical protein; 97.5 0.0009 1.9E-08 52.0 8.7 76 42-117 5-94 (287)
275 PRK12475 thiamine/molybdopteri 97.5 0.00067 1.5E-08 54.1 8.0 77 42-118 23-128 (338)
276 TIGR00080 pimt protein-L-isoas 97.5 0.0013 2.7E-08 49.1 9.0 96 39-136 74-176 (215)
277 TIGR00406 prmA ribosomal prote 97.5 0.0012 2.5E-08 51.6 9.2 98 40-140 157-262 (288)
278 CHL00194 ycf39 Ycf39; Provisio 97.5 0.0012 2.7E-08 52.2 9.5 71 45-116 2-74 (317)
279 TIGR03840 TMPT_Se_Te thiopurin 97.5 0.0013 2.8E-08 48.9 9.0 97 41-139 33-154 (213)
280 PRK06949 short chain dehydroge 97.5 0.00093 2E-08 51.0 8.6 76 41-116 7-96 (258)
281 PRK09291 short chain dehydroge 97.5 0.0012 2.7E-08 50.3 9.2 74 43-116 2-83 (257)
282 TIGR02992 ectoine_eutC ectoine 97.5 0.00084 1.8E-08 53.3 8.4 95 41-140 127-227 (326)
283 PRK08217 fabG 3-ketoacyl-(acyl 97.5 0.0014 3E-08 49.8 9.3 75 42-116 4-92 (253)
284 PRK05884 short chain dehydroge 97.4 0.0012 2.5E-08 49.5 8.7 71 45-115 2-78 (223)
285 PRK09186 flagellin modificatio 97.4 0.001 2.2E-08 50.7 8.5 74 42-115 3-92 (256)
286 PRK12747 short chain dehydroge 97.4 0.0028 6.1E-08 48.2 10.9 99 42-140 3-147 (252)
287 PRK05876 short chain dehydroge 97.4 0.001 2.2E-08 51.5 8.6 75 42-116 5-93 (275)
288 PLN02253 xanthoxin dehydrogena 97.4 0.0015 3.1E-08 50.7 9.4 75 42-116 17-104 (280)
289 PRK07502 cyclohexadienyl dehyd 97.4 0.0017 3.6E-08 51.2 9.8 91 44-139 7-102 (307)
290 PRK12937 short chain dehydroge 97.4 0.0057 1.2E-07 46.2 12.5 100 41-140 3-142 (245)
291 PRK07453 protochlorophyllide o 97.4 0.00092 2E-08 53.0 8.4 75 42-116 5-93 (322)
292 PRK06914 short chain dehydroge 97.4 0.0034 7.4E-08 48.6 11.4 74 43-116 3-91 (280)
293 PRK07478 short chain dehydroge 97.4 0.0012 2.6E-08 50.4 8.6 75 42-116 5-93 (254)
294 PRK07984 enoyl-(acyl carrier p 97.4 0.0049 1.1E-07 47.4 12.0 75 42-116 5-94 (262)
295 PRK12828 short chain dehydroge 97.4 0.001 2.2E-08 50.0 8.2 75 42-116 6-92 (239)
296 PRK10792 bifunctional 5,10-met 97.4 0.0028 6E-08 49.0 10.3 95 22-139 138-233 (285)
297 PRK08644 thiamine biosynthesis 97.4 0.0009 2E-08 49.7 7.5 34 42-75 27-61 (212)
298 PRK15469 ghrA bifunctional gly 97.4 0.0019 4E-08 51.0 9.6 89 42-139 135-228 (312)
299 PRK06125 short chain dehydroge 97.4 0.0012 2.7E-08 50.5 8.5 75 42-116 6-91 (259)
300 KOG1210 Predicted 3-ketosphing 97.4 0.0053 1.1E-07 47.6 11.6 77 41-117 31-123 (331)
301 KOG1201 Hydroxysteroid 17-beta 97.4 0.0018 3.9E-08 49.8 9.0 77 41-117 36-125 (300)
302 PRK07370 enoyl-(acyl carrier p 97.4 0.0029 6.3E-08 48.5 10.4 99 42-140 5-150 (258)
303 PF10727 Rossmann-like: Rossma 97.4 0.00052 1.1E-08 46.5 5.4 87 43-136 10-102 (127)
304 PRK07677 short chain dehydroge 97.4 0.0013 2.9E-08 50.0 8.4 74 43-116 1-88 (252)
305 PRK07024 short chain dehydroge 97.4 0.002 4.4E-08 49.2 9.4 74 43-116 2-88 (257)
306 PF02353 CMAS: Mycolic acid cy 97.4 0.00083 1.8E-08 51.9 7.2 99 34-137 55-166 (273)
307 PRK07774 short chain dehydroge 97.4 0.0018 3.9E-08 49.2 8.9 75 42-116 5-93 (250)
308 PRK14188 bifunctional 5,10-met 97.4 0.0031 6.8E-08 49.1 10.1 95 22-140 137-233 (296)
309 cd05212 NAD_bind_m-THF_DH_Cycl 97.4 0.0078 1.7E-07 41.6 11.1 96 22-140 7-103 (140)
310 PRK06483 dihydromonapterin red 97.4 0.0022 4.8E-08 48.3 9.3 74 43-116 2-84 (236)
311 PRK08589 short chain dehydroge 97.3 0.0016 3.4E-08 50.3 8.6 74 42-116 5-92 (272)
312 PRK08643 acetoin reductase; Va 97.3 0.0015 3.2E-08 49.9 8.4 74 43-116 2-89 (256)
313 PRK07985 oxidoreductase; Provi 97.3 0.007 1.5E-07 47.4 12.3 100 41-140 47-188 (294)
314 PRK08177 short chain dehydroge 97.3 0.0019 4E-08 48.4 8.7 72 44-116 2-81 (225)
315 PRK08862 short chain dehydroge 97.3 0.0021 4.6E-08 48.3 9.0 75 42-116 4-93 (227)
316 PRK00107 gidB 16S rRNA methylt 97.3 0.0037 8E-08 45.5 9.9 98 39-138 42-146 (187)
317 PLN00141 Tic62-NAD(P)-related 97.3 0.0051 1.1E-07 46.9 11.1 98 42-139 16-133 (251)
318 PRK05565 fabG 3-ketoacyl-(acyl 97.3 0.004 8.6E-08 47.1 10.5 75 43-117 5-94 (247)
319 PLN02928 oxidoreductase family 97.3 0.002 4.4E-08 51.6 9.1 95 42-138 158-263 (347)
320 PRK06138 short chain dehydroge 97.3 0.0016 3.4E-08 49.6 8.2 75 42-116 4-91 (252)
321 PRK13255 thiopurine S-methyltr 97.3 0.0019 4E-08 48.3 8.3 95 40-136 35-154 (218)
322 PRK06701 short chain dehydroge 97.3 0.0049 1.1E-07 48.2 11.1 76 41-116 44-134 (290)
323 cd05211 NAD_bind_Glu_Leu_Phe_V 97.3 0.0034 7.4E-08 46.8 9.7 44 34-77 14-57 (217)
324 PRK05653 fabG 3-ketoacyl-(acyl 97.3 0.0036 7.9E-08 47.2 10.1 75 42-116 4-92 (246)
325 PRK07067 sorbitol dehydrogenas 97.3 0.0023 5E-08 48.9 9.1 75 42-116 5-90 (257)
326 PLN03075 nicotianamine synthas 97.3 0.0024 5.3E-08 49.6 9.0 97 41-137 122-233 (296)
327 COG2910 Putative NADH-flavin r 97.3 0.0032 6.9E-08 45.0 8.7 92 45-140 2-107 (211)
328 PF05368 NmrA: NmrA-like famil 97.3 0.0026 5.7E-08 47.9 9.1 70 46-116 1-74 (233)
329 PRK10258 biotin biosynthesis p 97.3 0.012 2.7E-07 44.9 12.9 154 41-201 41-203 (251)
330 PRK07666 fabG 3-ketoacyl-(acyl 97.3 0.0018 4E-08 48.8 8.2 76 42-117 6-95 (239)
331 PRK08213 gluconate 5-dehydroge 97.3 0.0021 4.7E-08 49.1 8.7 76 41-116 10-99 (259)
332 PRK06181 short chain dehydroge 97.3 0.002 4.3E-08 49.4 8.4 74 43-116 1-88 (263)
333 TIGR03589 PseB UDP-N-acetylglu 97.3 0.0028 6.1E-08 50.3 9.5 75 42-116 3-84 (324)
334 PRK08340 glucose-1-dehydrogena 97.3 0.002 4.3E-08 49.3 8.4 72 45-116 2-86 (259)
335 PF00899 ThiF: ThiF family; I 97.3 0.0013 2.9E-08 45.1 6.7 92 43-134 2-120 (135)
336 PF03446 NAD_binding_2: NAD bi 97.3 0.0016 3.5E-08 46.3 7.3 89 44-139 2-96 (163)
337 PRK08017 oxidoreductase; Provi 97.3 0.0033 7.1E-08 47.9 9.5 72 44-116 3-84 (256)
338 PRK06197 short chain dehydroge 97.3 0.0015 3.3E-08 51.4 7.8 76 41-116 14-105 (306)
339 PRK07069 short chain dehydroge 97.3 0.0051 1.1E-07 46.7 10.5 72 46-117 2-90 (251)
340 PRK12746 short chain dehydroge 97.3 0.0053 1.2E-07 46.7 10.6 75 42-116 5-100 (254)
341 PRK05875 short chain dehydroge 97.3 0.0029 6.3E-08 48.9 9.2 75 42-116 6-96 (276)
342 PRK06841 short chain dehydroge 97.3 0.0027 5.9E-08 48.3 9.0 74 42-116 14-99 (255)
343 PRK14982 acyl-ACP reductase; P 97.3 0.0035 7.7E-08 49.8 9.6 94 41-140 153-249 (340)
344 PRK12936 3-ketoacyl-(acyl-carr 97.3 0.0043 9.3E-08 46.9 9.9 75 42-116 5-90 (245)
345 PRK07402 precorrin-6B methylas 97.3 0.01 2.3E-07 43.5 11.6 99 39-138 37-143 (196)
346 PRK12769 putative oxidoreducta 97.3 0.0013 2.9E-08 57.3 7.9 77 41-117 325-423 (654)
347 PRK07688 thiamine/molybdopteri 97.2 0.0016 3.6E-08 51.9 7.7 76 43-118 24-128 (339)
348 PRK14189 bifunctional 5,10-met 97.2 0.0052 1.1E-07 47.5 10.1 96 22-140 137-233 (285)
349 PF02882 THF_DHG_CYH_C: Tetrah 97.2 0.006 1.3E-07 43.1 9.6 96 21-139 14-110 (160)
350 TIGR00438 rrmJ cell division p 97.2 0.0055 1.2E-07 44.6 9.8 99 35-138 25-147 (188)
351 PRK10669 putative cation:proto 97.2 0.0042 9.2E-08 53.1 10.5 91 44-135 418-513 (558)
352 PLN02989 cinnamyl-alcohol dehy 97.2 0.0024 5.2E-08 50.6 8.5 75 42-116 4-87 (325)
353 TIGR02622 CDP_4_6_dhtase CDP-g 97.2 0.003 6.4E-08 50.7 9.1 75 42-116 3-85 (349)
354 PRK05855 short chain dehydroge 97.2 0.0044 9.5E-08 53.0 10.7 76 42-117 314-403 (582)
355 PRK06720 hypothetical protein; 97.2 0.0034 7.4E-08 44.9 8.5 76 42-117 15-104 (169)
356 PRK07035 short chain dehydroge 97.2 0.0027 6E-08 48.3 8.5 75 42-116 7-95 (252)
357 TIGR02354 thiF_fam2 thiamine b 97.2 0.0022 4.7E-08 47.2 7.6 34 42-75 20-54 (200)
358 PRK07904 short chain dehydroge 97.2 0.0031 6.7E-08 48.2 8.7 78 40-117 5-98 (253)
359 PF02670 DXP_reductoisom: 1-de 97.2 0.0091 2E-07 40.5 9.9 91 46-136 1-120 (129)
360 TIGR02355 moeB molybdopterin s 97.2 0.0021 4.5E-08 48.8 7.6 76 43-118 24-126 (240)
361 cd01487 E1_ThiF_like E1_ThiF_l 97.2 0.0018 3.8E-08 46.7 6.9 32 45-76 1-33 (174)
362 PF02254 TrkA_N: TrkA-N domain 97.2 0.0056 1.2E-07 40.7 8.9 90 46-136 1-95 (116)
363 PRK06482 short chain dehydroge 97.2 0.0039 8.5E-08 48.2 9.3 74 44-117 3-87 (276)
364 PRK05690 molybdopterin biosynt 97.2 0.0029 6.2E-08 48.2 8.2 34 42-75 31-65 (245)
365 PRK12938 acetyacetyl-CoA reduc 97.2 0.01 2.2E-07 44.9 11.4 76 42-117 2-92 (246)
366 COG0569 TrkA K+ transport syst 97.2 0.0042 9.2E-08 46.6 9.0 74 45-118 2-78 (225)
367 COG0111 SerA Phosphoglycerate 97.2 0.0063 1.4E-07 48.2 10.4 118 43-192 142-265 (324)
368 PRK07074 short chain dehydroge 97.2 0.0033 7.1E-08 48.0 8.7 75 43-117 2-88 (257)
369 PRK12743 oxidoreductase; Provi 97.2 0.014 3.1E-07 44.5 12.2 74 43-116 2-90 (256)
370 PRK07097 gluconate 5-dehydroge 97.2 0.003 6.5E-08 48.5 8.5 75 42-116 9-97 (265)
371 smart00846 Gp_dh_N Glyceraldeh 97.2 0.0089 1.9E-07 41.8 10.0 97 45-141 2-122 (149)
372 PRK06932 glycerate dehydrogena 97.2 0.0035 7.6E-08 49.5 8.9 85 42-139 146-235 (314)
373 PRK14191 bifunctional 5,10-met 97.2 0.0087 1.9E-07 46.3 10.7 95 22-139 136-231 (285)
374 PRK12826 3-ketoacyl-(acyl-carr 97.2 0.0029 6.3E-08 48.0 8.3 76 42-117 5-94 (251)
375 PRK08291 ectoine utilization p 97.2 0.0034 7.3E-08 50.0 8.8 94 41-139 130-229 (330)
376 PRK07454 short chain dehydroge 97.2 0.0035 7.6E-08 47.4 8.7 76 41-116 4-93 (241)
377 PRK03562 glutathione-regulated 97.2 0.0026 5.6E-08 55.0 8.7 92 43-135 400-496 (621)
378 PRK08762 molybdopterin biosynt 97.2 0.0031 6.7E-08 51.2 8.6 77 42-118 134-237 (376)
379 COG0334 GdhA Glutamate dehydro 97.2 0.0072 1.6E-07 48.7 10.4 59 18-77 183-241 (411)
380 PRK09310 aroDE bifunctional 3- 97.2 0.0056 1.2E-07 51.3 10.3 86 27-117 316-401 (477)
381 COG2227 UbiG 2-polyprenyl-3-me 97.2 0.0041 9E-08 46.4 8.5 93 42-138 59-162 (243)
382 PRK06172 short chain dehydroge 97.1 0.0025 5.5E-08 48.5 7.7 75 42-116 6-94 (253)
383 PRK06124 gluconate 5-dehydroge 97.1 0.0033 7.1E-08 48.0 8.3 76 41-116 9-98 (256)
384 PRK15181 Vi polysaccharide bio 97.1 0.0051 1.1E-07 49.4 9.7 87 29-116 2-100 (348)
385 PRK08277 D-mannonate oxidoredu 97.1 0.0035 7.7E-08 48.5 8.6 75 42-116 9-97 (278)
386 PRK06198 short chain dehydroge 97.1 0.0033 7.2E-08 48.0 8.3 76 41-116 4-94 (260)
387 PRK08251 short chain dehydroge 97.1 0.0036 7.8E-08 47.5 8.5 74 43-116 2-91 (248)
388 PRK12480 D-lactate dehydrogena 97.1 0.0048 1E-07 49.1 9.3 86 42-138 145-235 (330)
389 PRK06935 2-deoxy-D-gluconate 3 97.1 0.0037 8.1E-08 47.8 8.5 74 42-116 14-101 (258)
390 PRK10637 cysG siroheme synthas 97.1 0.022 4.9E-07 47.5 13.6 117 41-161 10-128 (457)
391 PRK01438 murD UDP-N-acetylmura 97.1 0.0075 1.6E-07 50.6 11.0 72 41-117 14-89 (480)
392 PF01408 GFO_IDH_MocA: Oxidore 97.1 0.0093 2E-07 39.8 9.5 87 45-136 2-91 (120)
393 cd01483 E1_enzyme_family Super 97.1 0.0033 7.1E-08 43.6 7.5 31 45-75 1-32 (143)
394 PRK05447 1-deoxy-D-xylulose 5- 97.1 0.0088 1.9E-07 48.2 10.6 93 44-136 2-121 (385)
395 PLN02819 lysine-ketoglutarate 97.1 0.0062 1.3E-07 55.2 10.8 96 42-137 568-679 (1042)
396 PLN02780 ketoreductase/ oxidor 97.1 0.0029 6.3E-08 50.2 7.9 44 42-85 52-96 (320)
397 PLN02896 cinnamyl-alcohol dehy 97.1 0.0055 1.2E-07 49.2 9.6 76 41-116 8-89 (353)
398 PRK13302 putative L-aspartate 97.1 0.0056 1.2E-07 47.3 9.2 88 44-136 7-97 (271)
399 TIGR01832 kduD 2-deoxy-D-gluco 97.1 0.0055 1.2E-07 46.5 9.1 75 42-116 4-90 (248)
400 PRK14967 putative methyltransf 97.1 0.0077 1.7E-07 45.2 9.6 92 40-136 34-158 (223)
401 TIGR01532 E4PD_g-proteo D-eryt 97.1 0.0057 1.2E-07 48.4 9.1 95 45-140 1-123 (325)
402 PRK08703 short chain dehydroge 97.1 0.0056 1.2E-07 46.2 8.9 43 42-84 5-48 (239)
403 COG2519 GCD14 tRNA(1-methylade 97.1 0.006 1.3E-07 45.9 8.7 97 39-137 91-195 (256)
404 PRK06113 7-alpha-hydroxysteroi 97.1 0.0042 9.1E-08 47.4 8.2 75 42-116 10-98 (255)
405 PRK14178 bifunctional 5,10-met 97.1 0.011 2.4E-07 45.6 10.2 96 22-140 131-227 (279)
406 PRK14179 bifunctional 5,10-met 97.1 0.0096 2.1E-07 46.0 9.9 96 22-140 137-233 (284)
407 PRK08936 glucose-1-dehydrogena 97.1 0.015 3.3E-07 44.5 11.2 76 41-116 5-95 (261)
408 PRK08317 hypothetical protein; 97.0 0.0051 1.1E-07 46.3 8.5 100 38-138 15-125 (241)
409 PRK06179 short chain dehydroge 97.0 0.0037 8E-08 48.1 7.8 72 42-116 3-83 (270)
410 PRK14618 NAD(P)H-dependent gly 97.0 0.0046 9.9E-08 49.2 8.5 91 44-138 5-105 (328)
411 PRK15409 bifunctional glyoxyla 97.0 0.0059 1.3E-07 48.4 8.9 88 42-138 144-237 (323)
412 PLN02986 cinnamyl-alcohol dehy 97.0 0.0057 1.2E-07 48.4 9.0 75 42-116 4-87 (322)
413 PRK08410 2-hydroxyacid dehydro 97.0 0.0067 1.4E-07 47.9 9.2 85 42-138 144-233 (311)
414 PRK12384 sorbitol-6-phosphate 97.0 0.0047 1E-07 47.2 8.2 74 43-116 2-91 (259)
415 PRK06077 fabG 3-ketoacyl-(acyl 97.0 0.016 3.5E-07 43.9 11.1 99 42-140 5-143 (252)
416 TIGR01963 PHB_DH 3-hydroxybuty 97.0 0.0055 1.2E-07 46.6 8.6 74 43-116 1-88 (255)
417 PRK14106 murD UDP-N-acetylmura 97.0 0.0066 1.4E-07 50.5 9.6 72 42-117 4-79 (450)
418 PF01210 NAD_Gly3P_dh_N: NAD-d 97.0 0.0021 4.6E-08 45.4 5.8 91 45-136 1-101 (157)
419 PLN02520 bifunctional 3-dehydr 97.0 0.0047 1E-07 52.4 8.7 73 42-117 378-450 (529)
420 PRK05650 short chain dehydroge 97.0 0.0051 1.1E-07 47.4 8.4 73 45-117 2-88 (270)
421 TIGR01289 LPOR light-dependent 97.0 0.0054 1.2E-07 48.5 8.7 74 43-116 3-91 (314)
422 PRK05479 ketol-acid reductoiso 97.0 0.009 2E-07 47.3 9.7 86 41-134 15-105 (330)
423 PTZ00098 phosphoethanolamine N 97.0 0.0029 6.2E-08 48.7 6.8 104 33-139 44-158 (263)
424 PRK08264 short chain dehydroge 97.0 0.0067 1.4E-07 45.7 8.7 71 42-116 5-83 (238)
425 PRK08220 2,3-dihydroxybenzoate 97.0 0.018 3.9E-07 43.7 11.2 70 42-117 7-87 (252)
426 PRK07775 short chain dehydroge 97.0 0.0085 1.9E-07 46.3 9.4 76 42-117 9-98 (274)
427 PRK13656 trans-2-enoyl-CoA red 97.0 0.024 5.2E-07 45.8 11.9 75 42-117 40-142 (398)
428 PRK07791 short chain dehydroge 97.0 0.0057 1.2E-07 47.7 8.5 76 41-116 4-102 (286)
429 PRK03659 glutathione-regulated 97.0 0.0044 9.6E-08 53.4 8.4 92 44-136 401-497 (601)
430 cd00757 ThiF_MoeB_HesA_family 97.0 0.0029 6.4E-08 47.6 6.6 33 43-75 21-54 (228)
431 COG2226 UbiE Methylase involve 97.0 0.011 2.5E-07 44.5 9.5 100 40-141 49-160 (238)
432 PRK13403 ketol-acid reductoiso 97.0 0.011 2.3E-07 46.6 9.6 88 41-136 14-105 (335)
433 PRK09496 trkA potassium transp 97.0 0.0066 1.4E-07 50.5 9.2 74 45-118 2-77 (453)
434 PRK08328 hypothetical protein; 97.0 0.0045 9.7E-08 46.7 7.4 33 43-75 27-60 (231)
435 cd05291 HicDH_like L-2-hydroxy 97.0 0.019 4.2E-07 45.2 11.3 92 45-140 2-120 (306)
436 PRK08278 short chain dehydroge 97.0 0.0068 1.5E-07 46.9 8.7 75 42-116 5-100 (273)
437 PRK07578 short chain dehydroge 97.0 0.018 3.9E-07 42.1 10.6 60 45-116 2-65 (199)
438 PF01370 Epimerase: NAD depend 97.0 0.0059 1.3E-07 45.8 8.2 72 46-117 1-76 (236)
439 PRK06436 glycerate dehydrogena 97.0 0.0062 1.3E-07 47.8 8.4 85 42-138 121-210 (303)
440 PRK08628 short chain dehydroge 97.0 0.0051 1.1E-07 47.0 7.9 75 41-116 5-93 (258)
441 PF08704 GCD14: tRNA methyltra 97.0 0.005 1.1E-07 46.8 7.5 98 39-137 37-146 (247)
442 PRK04266 fibrillarin; Provisio 97.0 0.018 3.9E-07 43.3 10.5 97 39-136 69-175 (226)
443 PRK07889 enoyl-(acyl carrier p 97.0 0.0079 1.7E-07 46.0 8.9 75 42-116 6-95 (256)
444 PRK00141 murD UDP-N-acetylmura 96.9 0.013 2.7E-07 49.2 10.6 73 41-117 13-85 (473)
445 PRK08416 7-alpha-hydroxysteroi 96.9 0.006 1.3E-07 46.7 8.1 74 42-115 7-96 (260)
446 PRK00312 pcm protein-L-isoaspa 96.9 0.0088 1.9E-07 44.4 8.8 97 39-138 75-176 (212)
447 KOG1610 Corticosteroid 11-beta 96.9 0.029 6.3E-07 43.6 11.5 104 41-144 27-171 (322)
448 PRK08690 enoyl-(acyl carrier p 96.9 0.0067 1.5E-07 46.6 8.3 75 42-116 5-94 (261)
449 TIGR03206 benzo_BadH 2-hydroxy 96.9 0.0067 1.5E-07 46.0 8.3 75 42-116 2-90 (250)
450 COG2084 MmsB 3-hydroxyisobutyr 96.9 0.039 8.5E-07 42.8 12.3 89 45-139 2-97 (286)
451 PRK08605 D-lactate dehydrogena 96.9 0.025 5.3E-07 45.2 11.6 87 42-138 145-237 (332)
452 PRK13303 L-aspartate dehydroge 96.9 0.0071 1.5E-07 46.6 8.3 87 45-136 3-91 (265)
453 PRK13304 L-aspartate dehydroge 96.9 0.0088 1.9E-07 46.1 8.8 85 45-135 3-90 (265)
454 PLN02657 3,8-divinyl protochlo 96.9 0.0093 2E-07 48.7 9.4 76 41-116 58-146 (390)
455 PRK05600 thiamine biosynthesis 96.9 0.005 1.1E-07 49.7 7.7 34 42-75 40-74 (370)
456 PRK00811 spermidine synthase; 96.9 0.016 3.4E-07 45.2 10.3 95 41-136 75-190 (283)
457 PRK09135 pteridine reductase; 96.9 0.0079 1.7E-07 45.5 8.5 75 42-116 5-95 (249)
458 PRK12823 benD 1,6-dihydroxycyc 96.9 0.01 2.3E-07 45.3 9.2 74 42-116 7-94 (260)
459 PRK14176 bifunctional 5,10-met 96.9 0.019 4.1E-07 44.5 10.4 95 22-139 143-238 (287)
460 PRK11036 putative S-adenosyl-L 96.9 0.0096 2.1E-07 45.6 8.9 94 41-137 43-149 (255)
461 PRK08945 putative oxoacyl-(acy 96.9 0.0078 1.7E-07 45.6 8.4 77 40-116 9-102 (247)
462 PRK07066 3-hydroxybutyryl-CoA 96.9 0.023 4.9E-07 45.1 11.0 95 43-138 7-119 (321)
463 PTZ00146 fibrillarin; Provisio 96.9 0.019 4E-07 44.6 10.3 103 32-136 123-236 (293)
464 COG2423 Predicted ornithine cy 96.9 0.012 2.6E-07 46.6 9.5 98 41-139 128-227 (330)
465 PF02719 Polysacc_synt_2: Poly 96.9 0.0038 8.2E-08 48.4 6.5 73 46-118 1-89 (293)
466 cd05191 NAD_bind_amino_acid_DH 96.9 0.022 4.8E-07 35.7 9.1 34 41-74 21-55 (86)
467 KOG0725 Reductases with broad 96.9 0.0075 1.6E-07 46.6 8.2 77 41-117 6-100 (270)
468 PRK07102 short chain dehydroge 96.9 0.0068 1.5E-07 45.9 8.0 73 44-116 2-86 (243)
469 PLN02730 enoyl-[acyl-carrier-p 96.9 0.014 3E-07 46.0 9.8 38 42-80 8-48 (303)
470 TIGR01505 tartro_sem_red 2-hyd 96.9 0.0081 1.7E-07 47.0 8.5 85 46-137 2-93 (291)
471 PRK12744 short chain dehydroge 96.9 0.013 2.8E-07 44.8 9.5 75 42-116 7-99 (257)
472 PRK13581 D-3-phosphoglycerate 96.9 0.012 2.5E-07 50.0 9.9 88 42-138 139-231 (526)
473 PLN02233 ubiquinone biosynthes 96.9 0.012 2.5E-07 45.4 9.1 99 39-140 70-185 (261)
474 PRK11207 tellurite resistance 96.9 0.0038 8.3E-08 45.9 6.3 95 40-137 28-134 (197)
475 PRK11559 garR tartronate semia 96.9 0.012 2.6E-07 46.1 9.5 87 45-138 4-97 (296)
476 PLN02695 GDP-D-mannose-3',5'-e 96.9 0.0056 1.2E-07 49.6 7.7 76 40-116 18-95 (370)
477 PRK06114 short chain dehydroge 96.9 0.0097 2.1E-07 45.4 8.7 75 42-116 7-96 (254)
478 PRK08063 enoyl-(acyl carrier p 96.9 0.0072 1.6E-07 45.8 8.0 75 42-116 3-92 (250)
479 PRK06953 short chain dehydroge 96.9 0.0087 1.9E-07 44.7 8.3 73 44-117 2-81 (222)
480 TIGR02415 23BDH acetoin reduct 96.9 0.0076 1.6E-07 45.8 8.1 73 44-116 1-87 (254)
481 KOG4169 15-hydroxyprostaglandi 96.9 0.017 3.7E-07 42.8 9.3 108 43-151 5-150 (261)
482 PRK01683 trans-aconitate 2-met 96.9 0.019 4E-07 44.1 10.2 95 40-137 29-130 (258)
483 PRK08293 3-hydroxybutyryl-CoA 96.9 0.062 1.4E-06 41.9 13.3 39 44-82 4-42 (287)
484 PRK06035 3-hydroxyacyl-CoA deh 96.8 0.051 1.1E-06 42.5 12.8 39 44-82 4-42 (291)
485 PF01118 Semialdhyde_dh: Semia 96.8 0.0057 1.2E-07 41.2 6.5 90 45-138 1-98 (121)
486 PRK14172 bifunctional 5,10-met 96.8 0.023 5E-07 43.8 10.4 96 22-140 137-233 (278)
487 PRK05597 molybdopterin biosynt 96.8 0.0061 1.3E-07 49.1 7.7 35 42-76 27-62 (355)
488 COG0623 FabI Enoyl-[acyl-carri 96.8 0.035 7.7E-07 41.3 10.8 102 40-141 3-148 (259)
489 PRK06997 enoyl-(acyl carrier p 96.8 0.0079 1.7E-07 46.2 8.1 75 42-116 5-94 (260)
490 PRK08303 short chain dehydroge 96.8 0.0088 1.9E-07 47.1 8.4 74 42-115 7-105 (305)
491 PRK07819 3-hydroxybutyryl-CoA 96.8 0.043 9.3E-07 42.8 12.1 38 44-81 6-43 (286)
492 PRK08655 prephenate dehydrogen 96.8 0.011 2.3E-07 49.0 9.2 88 45-138 2-93 (437)
493 PRK07856 short chain dehydroge 96.8 0.0045 9.8E-08 47.1 6.7 72 42-116 5-85 (252)
494 COG1179 Dinucleotide-utilizing 96.8 0.005 1.1E-07 46.0 6.5 99 42-140 29-156 (263)
495 PRK06522 2-dehydropantoate 2-r 96.8 0.0099 2.1E-07 46.7 8.7 89 45-136 2-99 (304)
496 PLN02662 cinnamyl-alcohol dehy 96.8 0.0091 2E-07 47.2 8.5 75 42-116 3-86 (322)
497 PLN02244 tocopherol O-methyltr 96.8 0.012 2.7E-07 47.0 9.3 97 41-138 117-224 (340)
498 PRK15116 sulfur acceptor prote 96.8 0.016 3.4E-07 44.6 9.4 34 42-75 29-63 (268)
499 PF07991 IlvN: Acetohydroxy ac 96.8 0.01 2.2E-07 41.7 7.5 88 42-136 3-94 (165)
500 PRK06823 ornithine cyclodeamin 96.8 0.062 1.3E-06 42.6 12.9 96 41-141 126-226 (315)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=9.6e-39 Score=245.56 Aligned_cols=210 Identities=47% Similarity=0.715 Sum_probs=193.9
Q ss_pred CcccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 1 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
+++|+++++++|+++++..||++.|++.|+|++|+... ++||++|+|+|.|++|.+++|+|+++|++|+++++++++++
T Consensus 126 v~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~-~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e 204 (339)
T COG1064 126 VVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKAN-VKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLE 204 (339)
T ss_pred EEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHH
Confidence 46899999999999999999999999999999998855 89999999999999999999999999999999999999887
Q ss_pred HHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC-CC-cccCccccccCCcEEE
Q 027668 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KP-LELPAFPLLTGEKIVG 158 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~-~~-~~~~~~~~~~~~~~i~ 158 (220)
.+ +++|++++++..+++..+...+.+|+++|+++ ..++..+++.|+++|+++++|.+. .. .+++.+.++++++++.
T Consensus 205 ~a-~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~ 282 (339)
T COG1064 205 LA-KKLGADHVINSSDSDALEAVKEIADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIV 282 (339)
T ss_pred HH-HHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEE
Confidence 66 79999999997776666666556999999999 778999999999999999999985 44 5678888999999999
Q ss_pred EeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEeC
Q 027668 159 GSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~~ 213 (220)
|+..+++.++++++++.+++.++|.+ +.++++++++||+.|.+++..+|+|+++.
T Consensus 283 GS~~g~~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 283 GSLVGTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred EEecCCHHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 99999999999999999999999999 79999999999999999999999999874
No 2
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.8e-36 Score=223.55 Aligned_cols=215 Identities=59% Similarity=0.929 Sum_probs=197.5
Q ss_pred CcccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 1 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
+++++.++++||++++++.||++.|++.|+|..|.+.+ +.||+++.|.|+|++|.+++|++|++|.+|+++++++.+++
T Consensus 141 ~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g-~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kke 219 (360)
T KOG0023|consen 141 AVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSG-LGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKE 219 (360)
T ss_pred EEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcC-CCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHH
Confidence 46788999999999999999999999999999998776 78999999999977999999999999999999999998889
Q ss_pred HHHHHcCCcEEecCC-CHHHHHHhcCCccEEEEcCC--CcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEE
Q 027668 81 EAVERLGADSFLVSR-DQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIV 157 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~-~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i 157 (220)
++.+.+|++..++.. ++++++++.+-.|..++++. ....+..++..+|++|++|++|.+.....++.+++..+.+++
T Consensus 220 ea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 220 EAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSI 299 (360)
T ss_pred HHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEE
Confidence 999999998877776 78888887766666666665 555689999999999999999999888999999999999999
Q ss_pred EEeeccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEeCCcc
Q 027668 158 GGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 216 (220)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~~~~~ 216 (220)
.||..+++.+.++++++.+++.++++++..+++++++||++|++++.++|.|+++..+.
T Consensus 300 ~GS~vG~~ket~E~Ldf~a~~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~ 358 (360)
T KOG0023|consen 300 KGSIVGSRKETQEALDFVARGLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKSL 358 (360)
T ss_pred EeeccccHHHHHHHHHHHHcCCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999999999987663
No 3
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-34 Score=216.51 Aligned_cols=209 Identities=22% Similarity=0.266 Sum_probs=183.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
+.++++++|+|+++|++++|.+.. ++.++||+++.. +++|++|||+|+||+|+.+...||++|+ +|++++-.+.|++
T Consensus 131 ~~~~dfc~KLPd~vs~eeGAl~eP-LsV~~HAcr~~~-vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle 208 (354)
T KOG0024|consen 131 VHPADFCYKLPDNVSFEEGALIEP-LSVGVHACRRAG-VKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLE 208 (354)
T ss_pred EechHheeeCCCCCchhhcccccc-hhhhhhhhhhcC-cccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHH
Confidence 578999999999999999997775 788999997665 8999999999999999999999999999 9999999998887
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHh----cC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccc
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAA----MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~----~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~ 151 (220)
.+ ++||++.+.+.... +.+.+. .+ .+|++|||+|...+++.++..++.+|++++.|......+|+...+.
T Consensus 209 ~A-k~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~ 287 (354)
T KOG0024|consen 209 LA-KKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVA 287 (354)
T ss_pred HH-HHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhh
Confidence 77 67999988766552 222222 22 4999999999998999999999999999999998888999999999
Q ss_pred cCCcEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCc-ceEEEEEeC
Q 027668 152 TGEKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADV-RYRFVIDVA 213 (220)
Q Consensus 152 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~-~~k~v~~~~ 213 (220)
.+++.+.|++.+...+|+.+++++++|+++.. + +.|++++..|||+.+.++.. .-|+++...
T Consensus 288 ~kE~~~~g~fry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 288 LKEVDLRGSFRYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred hheeeeeeeeeeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 99999999999998899999999999998864 5 89999999999999987774 468888764
No 4
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=9e-34 Score=226.64 Aligned_cols=214 Identities=72% Similarity=1.143 Sum_probs=188.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
++|++.++++|+++++++++++++.+.|+|+++.....+++|++|+|.|+|++|++++|+++.+|++|++++.+++++.+
T Consensus 143 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~ 222 (360)
T PLN02586 143 VVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDE 222 (360)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhh
Confidence 57788999999999999999999999999999877666689999999999999999999999999999988888777777
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEee
Q 027668 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSL 161 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~ 161 (220)
+++++|++.++++.+.+.+.+..+++|++||++|....+..++++++++|+++.+|......+++...++.++..+.++.
T Consensus 223 ~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~ 302 (360)
T PLN02586 223 AINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSD 302 (360)
T ss_pred HHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcC
Confidence 77889999998877655666666689999999998667888999999999999999765555677777777888898988
Q ss_pred ccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEeCCc
Q 027668 162 IGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANT 215 (220)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~~~~ 215 (220)
.++..+++++++++++|.+++.+++|+++++++||+.+.+++..+|+++.+.++
T Consensus 303 ~~~~~~~~~~~~li~~g~i~~~~~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 356 (360)
T PLN02586 303 IGGIKETQEMLDFCAKHNITADIELIRMDEINTAMERLAKSDVRYRFVIDVANS 356 (360)
T ss_pred cCCHHHHHHHHHHHHhCCCCCcEEEEeHHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 878888999999999999998778999999999999999998889999998443
No 5
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.2e-33 Score=224.25 Aligned_cols=214 Identities=64% Similarity=1.061 Sum_probs=186.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccC-CCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
++|++.++++|+++++++++++.+.+.|+|+++..... .++|++|+|.|+|++|++++|+|+.+|++|++++.+++++.
T Consensus 137 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~ 216 (375)
T PLN02178 137 VVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKER 216 (375)
T ss_pred EEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhH
Confidence 57888999999999999999999999999999876543 36899999999999999999999999999999888776655
Q ss_pred HHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEe
Q 027668 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGS 160 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~ 160 (220)
++++++|++.++++.+.+.+.+..+++|++|||+|....+..++++++++|+++.+|......+++...++.+++++.|+
T Consensus 217 ~~a~~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~ 296 (375)
T PLN02178 217 EAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGS 296 (375)
T ss_pred HHHHhCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEe
Confidence 66689999999887665555555568999999999876688999999999999999986555567777778899999999
Q ss_pred eccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEeCCc
Q 027668 161 LIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANT 215 (220)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~~~~ 215 (220)
..++..++.++++++++|++++.+++|+|+++++||+.+.+++..+|+++.+.++
T Consensus 297 ~~~~~~~~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 351 (375)
T PLN02178 297 QIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANS 351 (375)
T ss_pred CccCHHHHHHHHHHHHhCCCcccEEEEeHHHHHHHHHHHHcCCCceEEEEEeccc
Confidence 8888889999999999999998888899999999999999998889999998544
No 6
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.6e-32 Score=219.36 Aligned_cols=214 Identities=55% Similarity=0.916 Sum_probs=188.8
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
++|.+.++++|+++++++++++++.+.|||+++......++|++++|+|+|++|++++|+++.+|+++++++.++++++.
T Consensus 140 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~ 219 (357)
T PLN02514 140 VVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREE 219 (357)
T ss_pred EEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 56788999999999999999999999999999987776689999999999999999999999999999999888888777
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEee
Q 027668 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSL 161 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~ 161 (220)
+.+++|++.+++..+.+.+.+..+++|++|||+|....+..++++++++|+++.+|......+++...++.++.++.|+.
T Consensus 220 ~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~ 299 (357)
T PLN02514 220 ALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSF 299 (357)
T ss_pred HHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEe
Confidence 77789998877766655565555689999999997667889999999999999999876555677777788999999999
Q ss_pred ccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEeCCc
Q 027668 162 IGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANT 215 (220)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~~~~ 215 (220)
..+..+++++++++++|.+.+.+++|+++++++||+.+.+++..+|+++.++.+
T Consensus 300 ~~~~~~~~~~~~~~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~ 353 (357)
T PLN02514 300 IGSMKETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGS 353 (357)
T ss_pred cCCHHHHHHHHHHHHhCCCcCcEEEEcHHHHHHHHHHHHcCCCceeEEEEcccc
Confidence 888889999999999999887678899999999999999998889999998654
No 7
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=5.8e-32 Score=212.14 Aligned_cols=209 Identities=29% Similarity=0.449 Sum_probs=178.2
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
++|++.++++|+++|+++||++++.+.|||+++....++++|++|||+|+ |++|++++|+||++|+.++++..++++.+
T Consensus 102 ~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~ 181 (326)
T COG0604 102 VVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181 (326)
T ss_pred EecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence 67899999999999999999999999999999999888999999999986 99999999999999987777777777777
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccCccccccC
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~~~~~~~~ 153 (220)
.++++|+++++++.+. +.++++++ ++|+|||++|.. .+..++++++++|+++.+|...+ ...++...++.+
T Consensus 182 -~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~ 259 (326)
T COG0604 182 -LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGK 259 (326)
T ss_pred -HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhc
Confidence 6689999999998774 45566665 699999999998 68889999999999999999773 345566667778
Q ss_pred CcEEEEeeccCH------HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHc-CCcceEEEEEe
Q 027668 154 EKIVGGSLIGGL------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAK-ADVRYRFVIDV 212 (220)
Q Consensus 154 ~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~-~~~~~k~v~~~ 212 (220)
..+..+...... +.+.++.+++++|.+++.+ .+|++++..++...... ++..||+|+++
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 260 RLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 888888776644 5577799999999999999 79999996555554444 47789999874
No 8
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.98 E-value=6.8e-31 Score=209.06 Aligned_cols=207 Identities=21% Similarity=0.260 Sum_probs=172.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
+++++.++++|+++++++++ +...+.++|+++.+.. ..+|++|+|+|+|++|++++|+++.+|+ +|+++++++++++
T Consensus 131 ~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~~~~-~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~ 208 (343)
T PRK09880 131 VVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAHQAG-DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLS 208 (343)
T ss_pred EechHHeEECCCCCCHHHHH-hhcHHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHH
Confidence 57888999999999987665 4556778999998765 5689999999999999999999999999 6888888888776
Q ss_pred HHHHHcCCcEEecCCCHHHHH--HhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEE
Q 027668 81 EAVERLGADSFLVSRDQDEMQ--AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVG 158 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~ 158 (220)
.+ +++|++.++++.+.+..+ ...+++|++|||+|.+..+..++++++++|+++.+|......+++...++.+++++.
T Consensus 209 ~a-~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~ 287 (343)
T PRK09880 209 LA-REMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLK 287 (343)
T ss_pred HH-HHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEE
Confidence 65 789999998876643211 112369999999998767889999999999999999866556677777788999999
Q ss_pred EeeccCHHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 159 GSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
++... .+++++++++++++.+++ .+ ++|+++++++|++.+.+++..+|+++.+
T Consensus 288 g~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 288 GSFRF-TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EEeec-cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 98754 467999999999999986 34 8999999999999999887779999864
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.98 E-value=9e-31 Score=210.40 Aligned_cols=208 Identities=26% Similarity=0.417 Sum_probs=177.4
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
++|++.++++|+++++++|+++.+.+.|||+++.....+++|++|+|.|+|++|++++|+++.+|+ +|++++.++++++
T Consensus 151 ~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~ 230 (371)
T cd08281 151 VVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLA 230 (371)
T ss_pred EecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 568889999999999999999999999999998666678999999999999999999999999999 6988888888776
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~~~~~~~~~ 154 (220)
.+ +++|++.++++.+.+ .+.+.++ ++|++|||+|....+..++++++++|+++.+|.... ..+++...++.++
T Consensus 231 ~a-~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 309 (371)
T cd08281 231 LA-RELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE 309 (371)
T ss_pred HH-HHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence 66 789999998877643 3444444 799999999987678899999999999999997643 3456666788899
Q ss_pred cEEEEeeccC---HHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 155 KIVGGSLIGG---LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 155 ~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
+++.|+...+ .+++.++++++++|.+++. + ++|+++++++||+.+.+++..+|+|+
T Consensus 310 ~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 310 RTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 9999987653 5678999999999999863 4 89999999999999999988777653
No 10
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.97 E-value=1.6e-30 Score=206.67 Aligned_cols=207 Identities=25% Similarity=0.334 Sum_probs=175.8
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
++|.+.++++|+++++++++++++.+.|||+++.... +++|++|+|+|+|++|++++|+++.+|++ |+++++++++++
T Consensus 124 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~ 202 (339)
T cd08239 124 LVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLE 202 (339)
T ss_pred EechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 5678899999999999999999999999999997655 78999999999999999999999999997 999888888776
Q ss_pred HHHHHcCCcEEecCCCHH--HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCc-cccccCCc
Q 027668 81 EAVERLGADSFLVSRDQD--EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA-FPLLTGEK 155 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~--~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~-~~~~~~~~ 155 (220)
.+ +++|++.++++.+.+ .+.+.++ ++|++|||+|....+..++++++++|+++.+|.... .+++. ..++.+++
T Consensus 203 ~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~ 280 (339)
T cd08239 203 LA-KALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQR 280 (339)
T ss_pred HH-HHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCC
Confidence 66 789999888876543 3334443 799999999988666789999999999999997553 23333 34677999
Q ss_pred EEEEeeccCHHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 156 IVGGSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
++.|+...+.+++++++++++++.+++ .+ ++|+++++++||+.+.++. .+|+|+++
T Consensus 281 ~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 281 TLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred EEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 999998888889999999999999875 34 8999999999999998775 68999874
No 11
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.97 E-value=3.2e-30 Score=205.32 Aligned_cols=206 Identities=19% Similarity=0.176 Sum_probs=170.8
Q ss_pred eeCCCCCCcc-cccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc
Q 027668 9 VRIPEGAPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86 (220)
Q Consensus 9 ~~~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 86 (220)
+++|++++++ +++++++.+.|||+++.....+++|++|||+|+ |++|++++|+|+.+|++|++++.++++++.+.+++
T Consensus 124 ~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l 203 (348)
T PLN03154 124 IQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL 203 (348)
T ss_pred ccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc
Confidence 3459999986 688999999999999977777899999999997 99999999999999999999988888877664479
Q ss_pred CCcEEecCCCH----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cc-----cCccccccCCc
Q 027668 87 GADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LE-----LPAFPLLTGEK 155 (220)
Q Consensus 87 g~~~v~~~~~~----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~-----~~~~~~~~~~~ 155 (220)
|++.++++.+. +.+++.++ ++|++|||+|.. .+..++++++++|+++.+|..... .+ ++...++.+++
T Consensus 204 Ga~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~ 282 (348)
T PLN03154 204 GFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRI 282 (348)
T ss_pred CCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccc
Confidence 99999987642 33444444 899999999986 688999999999999999976432 11 23445677899
Q ss_pred EEEEeeccC-----HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEeCCc
Q 027668 156 IVGGSLIGG-----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVANT 215 (220)
Q Consensus 156 ~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~~~~ 215 (220)
++.|+..+. .+.++++++++++|.+++.+ .+|+|+++++|++.+.+++..||+|+++.++
T Consensus 283 ~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 283 RMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred eEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 999886542 34578899999999999887 6899999999999999999999999998543
No 12
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.97 E-value=5.6e-30 Score=202.51 Aligned_cols=202 Identities=26% Similarity=0.319 Sum_probs=174.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
++|++.++++|+++++++++++++.+.|||+++.. ..+++|++|||+|+|++|++++|+++.+|++|+++++++++++.
T Consensus 126 ~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~ 204 (329)
T TIGR02822 126 TVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRL 204 (329)
T ss_pred EeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 57888999999999999999999999999999975 45899999999999999999999999999999999998887655
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCCcEEEEe
Q 027668 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEKIVGGS 160 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~~~i~~~ 160 (220)
+ +++|++.+++..+.. .+++|.++++.+....+..++++++++|+++.+|...+ ...++...++.+++++.++
T Consensus 205 a-~~~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~ 278 (329)
T TIGR02822 205 A-LALGAASAGGAYDTP-----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSV 278 (329)
T ss_pred H-HHhCCceeccccccC-----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEe
Confidence 5 899999988754321 13789999988877788999999999999999998533 2345666667889999998
Q ss_pred eccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEE
Q 027668 161 LIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
....+.++.+++++++++.+++..++|+++++++|++.+.+++..||+|+
T Consensus 279 ~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 279 TSNTRADAREFLELAAQHGVRVTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred ecCCHHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 88788889999999999999854489999999999999999998899987
No 13
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=2.6e-30 Score=187.69 Aligned_cols=214 Identities=21% Similarity=0.283 Sum_probs=178.8
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.+|...++++|+.++++.||++...+.|||..++....++||++||++.+ |++|+++.|+++..|+.+|.+..+.++++
T Consensus 106 ~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~ 185 (336)
T KOG1197|consen 106 TVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHE 185 (336)
T ss_pred cccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHH
Confidence 47889999999999999999999999999999999999999999999975 99999999999999999999999999887
Q ss_pred HHHHHcCCcEEecCCCHHHHH---HhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQDEMQ---AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~---~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~-~~~~~~~~~~~ 154 (220)
.+ ++.|+++.++++..|.++ ++++ |+|+++|++|.. ++...+.+|++.|.+|.+|..++.. +++...+-.+.
T Consensus 186 ~a-kenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~ 263 (336)
T KOG1197|consen 186 IA-KENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKA 263 (336)
T ss_pred HH-HhcCCcceeeccchhHHHHHHhccCCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhh
Confidence 77 789999999998876555 4553 999999999997 6999999999999999999876542 23322233344
Q ss_pred cEEEE-eec---cCHHH----HHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEeCCccc
Q 027668 155 KIVGG-SLI---GGLKE----TQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVANTMK 217 (220)
Q Consensus 155 ~~i~~-~~~---~~~~~----~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~~~~~~ 217 (220)
+++.. +.+ ..... ..+++.++.+|.+++.| |+||++++.+|+..+++.++.||+++.+.++..
T Consensus 264 l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~~ 335 (336)
T KOG1197|consen 264 LQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEKE 335 (336)
T ss_pred hhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcccc
Confidence 44432 211 12222 34567788899999999 899999999999999999999999999987753
No 14
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.97 E-value=1.5e-29 Score=202.48 Aligned_cols=208 Identities=24% Similarity=0.320 Sum_probs=174.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
.+|++.++++|+++++++++++.+.+.++|+++.....+++|++|||+|+|++|++++|+++.+|+ +|+++++++++++
T Consensus 136 ~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~ 215 (358)
T TIGR03451 136 LVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLE 215 (358)
T ss_pred EEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999887766678999999999999999999999999999 5888888887776
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccCccccccC
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~--~~~~~~~~~~~ 153 (220)
.+ +++|++.++++.+. +.+.+.++ ++|++|||+|....+..++++++++|+++.+|..... .+++...++.+
T Consensus 216 ~~-~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 294 (358)
T TIGR03451 216 WA-REFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGR 294 (358)
T ss_pred HH-HHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhc
Confidence 66 78999988887654 33444444 7999999999876788999999999999999986543 45666667788
Q ss_pred CcEEEEeecc---CHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 154 EKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 154 ~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
+.++.++... ...+++.+++++++|.+++. + ++|+++++++||+.+.+++.. |+++.
T Consensus 295 ~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 295 GGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred CCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 9999988643 45778999999999999763 4 899999999999999888764 77765
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=99.97 E-value=3.7e-29 Score=201.20 Aligned_cols=209 Identities=22% Similarity=0.300 Sum_probs=173.4
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
++|++.++++|+++++++++++.+.+.++|+++.....+++|++|||+|+|++|++++|+++.+|+ .|++++.++++++
T Consensus 153 ~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~ 232 (378)
T PLN02827 153 VVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAE 232 (378)
T ss_pred EechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 568889999999999999999999989999877666668999999999999999999999999999 4777777777766
Q ss_pred HHHHHcCCcEEecCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCCcccCc-ccccc
Q 027668 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKPLELPA-FPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~iv~~g~~~~~~~~~~-~~~~~ 152 (220)
.+ +++|++.++++.+. +.+++.++ ++|++|||+|....+..+++.++++ |+++.+|.......++. ..++.
T Consensus 233 ~a-~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~ 311 (378)
T PLN02827 233 KA-KTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL 311 (378)
T ss_pred HH-HHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence 55 88999988887642 23444444 8999999999876688999999998 99999998754444433 34677
Q ss_pred CCcEEEEeecc---CHHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 153 GEKIVGGSLIG---GLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 153 ~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
+++++.|+... ...+++++++++++|.+++ .+ ++|+++++++|++.+.+++. .|+|+++
T Consensus 312 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 312 SGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred cCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence 99999998664 3457889999999999998 45 89999999999999998876 6999976
No 16
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.97 E-value=2.3e-29 Score=200.68 Aligned_cols=208 Identities=23% Similarity=0.252 Sum_probs=177.6
Q ss_pred cccCcceeeCCC------CCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCC
Q 027668 2 VADEHFVVRIPE------GAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (220)
Q Consensus 2 ~~~~~~~~~~p~------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~ 75 (220)
.+|++.++++|+ +++++.++++.+.+.++|+++.+. .+++|++|+|+|+|++|++++|+++.+|++|++++++
T Consensus 121 ~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~~-~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~ 199 (349)
T TIGR03201 121 VVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQA-GLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDID 199 (349)
T ss_pred EechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCC
Confidence 567788999999 899999999999999999999764 5899999999999999999999999999999999998
Q ss_pred cccHHHHHHHcCCcEEecCCCH------HHHHHhcC--Ccc----EEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc
Q 027668 76 PSKKSEAVERLGADSFLVSRDQ------DEMQAAMG--TMD----GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL 143 (220)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~------~~~~~~~~--~~d----~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~ 143 (220)
+++++.+ +++|++.+++..+. +.++++++ ++| .+|||+|....++.++++++++|+++.+|......
T Consensus 200 ~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~ 278 (349)
T TIGR03201 200 PEKLEMM-KGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKT 278 (349)
T ss_pred HHHHHHH-HHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCc
Confidence 8887766 78999888876542 22334443 665 89999998877788999999999999999876555
Q ss_pred ccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCccee--EEEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 144 ELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRAD--IEVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 144 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
+++...++.++.++.+++..+..+++.+++++++|.+++. ++.|+++++++||+.+.+++..+|++++
T Consensus 279 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 279 EYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred ccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence 6666677778899999887778889999999999998763 4789999999999999999888898885
No 17
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.97 E-value=1.1e-29 Score=192.22 Aligned_cols=207 Identities=25% Similarity=0.400 Sum_probs=182.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
++++.+++|++++.+++.++++.|+..|.+-+..+...+++|++|.|.|.|.+|++++|-|+..|+ ++++++..++|++
T Consensus 145 vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~ 224 (366)
T COG1062 145 VVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLE 224 (366)
T ss_pred eecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHH
Confidence 578899999999999999999999999999988888889999999999999999999999999999 9999999999887
Q ss_pred HHHHHcCCcEEecCCCH----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccCccccccC
Q 027668 81 EAVERLGADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~--~~~~~~~~~~~ 153 (220)
.+ ++||+++++|..+. +.+.++++ |+|++|||+|+...+++++.+..++|+.+++|..... ++.++..+...
T Consensus 225 ~A-~~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g 303 (366)
T COG1062 225 LA-KKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG 303 (366)
T ss_pred HH-HhcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc
Confidence 77 89999999999875 34456666 9999999999999999999999999999999987643 55666666655
Q ss_pred CcEEEEeecc---CHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 154 EKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 154 ~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.+++|+..+ .+.+++.+++++.+|++... + +.++|+||+|||+.|..++.. |-|+.
T Consensus 304 -r~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 304 -RVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred -ceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 999999775 46889999999999998865 4 899999999999999998875 55554
No 18
>PLN02740 Alcohol dehydrogenase-like
Probab=99.97 E-value=1.5e-28 Score=198.15 Aligned_cols=207 Identities=24% Similarity=0.358 Sum_probs=171.2
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
++|.+.++++|+++++++++.+.+.+.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++
T Consensus 158 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 158 VLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFE 237 (381)
T ss_pred EEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence 567889999999999999999999999999987666678999999999999999999999999999 6999988888877
Q ss_pred HHHHHcCCcEEecCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCC--cccCccccc
Q 027668 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~iv~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +++|++.+++..+. +.+.+.++ ++|++||++|....+..++.+++++ |+++.+|..... .+++... +
T Consensus 238 ~a-~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~-~ 315 (381)
T PLN02740 238 KG-KEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPME-L 315 (381)
T ss_pred HH-HHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHH-H
Confidence 66 78999888876642 23444444 7999999999877789999999997 999999986543 2333222 3
Q ss_pred cCCcEEEEeeccC---HHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 152 TGEKIVGGSLIGG---LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.++.|+..++ ..+++++++++.++.+++. + ++|+++++++|++.+.+++. .|++++
T Consensus 316 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~ 380 (381)
T PLN02740 316 FDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH 380 (381)
T ss_pred hcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence 4688999886643 4678999999999998753 5 89999999999999988765 598886
No 19
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=1.5e-28 Score=193.20 Aligned_cols=211 Identities=24% Similarity=0.302 Sum_probs=167.1
Q ss_pred CcccCcceeeCCCCCCcccccccchhhhhhhhhhHhcc------CCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEe
Q 027668 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG------LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 73 (220)
Q Consensus 1 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~ 73 (220)
+++|...++++|+++++.+||+++.++.|||.++.... .+++|++|||+|+ |++|++++|+|+..|+..++++
T Consensus 110 ~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~ 189 (347)
T KOG1198|consen 110 VVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTA 189 (347)
T ss_pred EEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEE
Confidence 36788999999999999999999999999999999988 8999999999986 8999999999999996555566
Q ss_pred CCcccHHHHHHHcCCcEEecCCCHHHHHHhcC----CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCcc
Q 027668 74 TSPSKKSEAVERLGADSFLVSRDQDEMQAAMG----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAF 148 (220)
Q Consensus 74 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~----~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~ 148 (220)
.+.++. ++.+++|++.++|+++.+..++..+ +||+||||+|+. .....+.++..+|+...++...+. .+....
T Consensus 190 ~s~e~~-~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~ 267 (347)
T KOG1198|consen 190 CSKEKL-ELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLD 267 (347)
T ss_pred cccchH-HHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccc
Confidence 666665 4458999999999999765554432 899999999997 577788888888765555543321 111111
Q ss_pred ------------ccccCC-cEEEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEeC
Q 027668 149 ------------PLLTGE-KIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 149 ------------~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~~ 213 (220)
....++ ....+....+.+.++.+.++++++.+++.+ ++|+++++.+|++.+.++..+||+++.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 268 DLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred cchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 111112 222333445678899999999999999998 89999999999999999888899999875
No 20
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=1.3e-28 Score=183.99 Aligned_cols=207 Identities=25% Similarity=0.378 Sum_probs=182.2
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
+++...+.+|++..+++.++.+.|+..|+|-+.-+.+.++||+++.|+|.|.+|+++++-+++.|+ ++|.++-++++.+
T Consensus 152 Vv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~ 231 (375)
T KOG0022|consen 152 VVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFE 231 (375)
T ss_pred EeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHH
Confidence 678899999999999999999999999999888888889999999999999999999999999999 9999999999988
Q ss_pred HHHHHcCCcEEecCCC-----HHHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCC--cccCccccc
Q 027668 81 EAVERLGADSFLVSRD-----QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~-----~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~iv~~g~~~~~--~~~~~~~~~ 151 (220)
.+ ++||++..+|+.+ .+.+.+.++ |+|+.|||+|+.+++++++.+.++| |+-+.+|..... .++.++.++
T Consensus 232 ~a-k~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~ 310 (375)
T KOG0022|consen 232 KA-KEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV 310 (375)
T ss_pred HH-HhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc
Confidence 77 7999999999885 356677776 9999999999999999999999988 999999987654 455555555
Q ss_pred cCCcEEEEeecc---CHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 152 TGEKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.+.++.|+..+ ++++++.+.+.+.++.++.. | |.++|++|++||+.|.+++.. |-|+.
T Consensus 311 -~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 311 -TGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred -cccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 58888887664 57889999999999988865 4 999999999999999999876 66664
No 21
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.96 E-value=3.5e-28 Score=195.13 Aligned_cols=208 Identities=23% Similarity=0.355 Sum_probs=169.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
++|.+.++++|+++++++++++++.+.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|++++.++++++
T Consensus 145 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~ 224 (368)
T TIGR02818 145 VVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFE 224 (368)
T ss_pred EechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999998766678999999999999999999999999999 7999988888876
Q ss_pred HHHHHcCCcEEecCCC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC--CcccCccccc
Q 027668 81 EAVERLGADSFLVSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~---~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~iv~~g~~~~--~~~~~~~~~~ 151 (220)
.+ +++|++.+++..+ . +.+.+.++ ++|++|||+|....+..++++++++ |+++.+|.... ..+++...++
T Consensus 225 ~a-~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~ 303 (368)
T TIGR02818 225 LA-KKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV 303 (368)
T ss_pred HH-HHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh
Confidence 66 7899998887653 1 33444444 8999999999876788999999886 99999998642 2344444444
Q ss_pred cCCcEEEEeecc---CHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 152 TGEKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 152 ~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
. +..+.++... ...++.+++++++++.+++. + ++|+++++++|++.+.+++. .|+++.+
T Consensus 304 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 304 T-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred c-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 3 4456776543 35678999999999998753 4 89999999999999987764 6998864
No 22
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.96 E-value=4.6e-28 Score=192.13 Aligned_cols=208 Identities=33% Similarity=0.593 Sum_probs=179.8
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++.+++++++.+.++|+++... .+.++++|+|+|+|++|++++++++.+|++++++++++++++.
T Consensus 124 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~ 202 (333)
T cd08296 124 LAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADL 202 (333)
T ss_pred EEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 467788999999999999999999999999999776 6899999999999999999999999999999999998887766
Q ss_pred HHHHcCCcEEecCCCHHHHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEE
Q 027668 82 AVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGG 159 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~ 159 (220)
+ +++|++.++++.+.+..+.+. +++|++||++|....+..++++++++|+++.+|......+++...++.++.++.+
T Consensus 203 ~-~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 281 (333)
T cd08296 203 A-RKLGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHG 281 (333)
T ss_pred H-HHcCCcEEecCCCccHHHHHHhcCCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEE
Confidence 6 789999888876643332221 4799999998766578899999999999999998765566666667789999999
Q ss_pred eeccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 160 SLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
+......++..+++++.++.+++.++.|+++++.+||+.+.+++..||+|++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 282 WPSGTALDSEDTLKFSALHGVRPMVETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred eCcCCHHHHHHHHHHHHhCCCCceEEEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 9877788899999999999888767889999999999999999888999874
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.96 E-value=3.8e-28 Score=193.65 Aligned_cols=208 Identities=21% Similarity=0.278 Sum_probs=168.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
.+|++.++++|+++++++++.+. ...++++++.. ..+++|++|+|+|+|++|++++|+|+.+|++ |+++++++++++
T Consensus 122 ~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 199 (347)
T PRK10309 122 VVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLA 199 (347)
T ss_pred EeehHHeEECcCCCCHHHhhhhh-HHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 56788999999999999998764 34557777654 4578999999999999999999999999996 678888887776
Q ss_pred HHHHHcCCcEEecCCCH--HHHHHhcC--Ccc-EEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCc---ccccc
Q 027668 81 EAVERLGADSFLVSRDQ--DEMQAAMG--TMD-GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA---FPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~~~~~~~--~~d-~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~---~~~~~ 152 (220)
.+ +++|++.+++..+. +.+.+.++ ++| ++|||+|....+..++++++++|+++.+|......+++. ..++.
T Consensus 200 ~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 278 (347)
T PRK10309 200 LA-KSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILR 278 (347)
T ss_pred HH-HHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhh
Confidence 65 78999888876642 33444443 788 999999987678999999999999999998754433332 34677
Q ss_pred CCcEEEEeecc-----CHHHHHHHHHHHHhCCcc--eeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 153 GEKIVGGSLIG-----GLKETQEMIDFAAKHNIR--ADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 153 ~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~--~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
+++++.|+..+ ...+++++++++++|.+. +.+ ++|+++++++|++.+.+++..+|+++++
T Consensus 279 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 279 KELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 89999998653 246789999999999986 345 8999999999999999888789999875
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.96 E-value=9.6e-28 Score=192.48 Aligned_cols=206 Identities=25% Similarity=0.395 Sum_probs=169.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++.+.+.|||+++.....+++|++|+|+|+|++|++++|+++.+|+ +|+++++++++++
T Consensus 144 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~ 223 (365)
T cd08277 144 VVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFE 223 (365)
T ss_pred EEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 567789999999999999999999999999987666678999999999999999999999999999 7988988888776
Q ss_pred HHHHHcCCcEEecCCC-----HHHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCC-CcccCcccccc
Q 027668 81 EAVERLGADSFLVSRD-----QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK-PLELPAFPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~-----~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~iv~~g~~~~-~~~~~~~~~~~ 152 (220)
.+ +++|++.+++..+ .+.+++.++ ++|++|||+|....+..++++++++ |+++.+|...+ ..+++...++.
T Consensus 224 ~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 302 (365)
T cd08277 224 KA-KEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL 302 (365)
T ss_pred HH-HHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh
Confidence 66 7899988887654 233444444 8999999999876788899999885 99999998653 34455555553
Q ss_pred CCcEEEEeeccC---HHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 153 GEKIVGGSLIGG---LKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 153 ~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
++++.|+..+. ..++++++++++++.++. .+ ++|+++++++||+.+.+++ ..|+++
T Consensus 303 -~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 303 -GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred -CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 78898886653 457899999999998764 35 8999999999999998877 468876
No 25
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.96 E-value=6.1e-28 Score=191.83 Aligned_cols=210 Identities=18% Similarity=0.176 Sum_probs=169.9
Q ss_pred cccC-cceeeCC-CCCCcc-cccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc
Q 027668 2 VADE-HFVVRIP-EGAPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~~~~-~~~~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~ 77 (220)
++|+ ..++++| +++++. +++++.+.+.|||+++.....+++|++|||+|+ |++|++++|+|+.+|++|++++++++
T Consensus 108 ~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~ 187 (338)
T cd08295 108 LIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE 187 (338)
T ss_pred EecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5677 6899995 678876 788999999999999977777899999999997 99999999999999999999998888
Q ss_pred cHHHHHHHcCCcEEecCCCH----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-c-----ccC
Q 027668 78 KKSEAVERLGADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-L-----ELP 146 (220)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~-----~~~ 146 (220)
+.+.+.+.+|++.++++.+. +.+.+..+ ++|++||++|.. .+..++++++++|+++.+|..... . ..+
T Consensus 188 ~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~ 266 (338)
T cd08295 188 KVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRN 266 (338)
T ss_pred HHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccC
Confidence 87777434999988885432 23344443 899999999985 688999999999999999875432 1 123
Q ss_pred ccccccCCcEEEEeeccCH-----HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 147 AFPLLTGEKIVGGSLIGGL-----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
...+..++.++.++..... +.++.+++++.+|.+++.+ ..|+++++++|++.+++++..||+|+++
T Consensus 267 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 267 LLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 3455677888888654332 3367889999999999876 7899999999999999988889999864
No 26
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.96 E-value=9.5e-28 Score=192.69 Aligned_cols=207 Identities=24% Similarity=0.369 Sum_probs=167.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
+++++.++++|+++++++++.+++.+.|||+++.....+++|++|||+|+|++|++++|+++.+|+ +|+++++++++++
T Consensus 146 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~ 225 (368)
T cd08300 146 VVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFE 225 (368)
T ss_pred EEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467889999999999999999999999999988666668999999999999999999999999999 7999999988877
Q ss_pred HHHHHcCCcEEecCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCC--cccCccccc
Q 027668 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~iv~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +++|++.++++.+. +.+.+.++ ++|+||||+|....+..++++++++ |+++.+|..... .+++...+.
T Consensus 226 ~~-~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 304 (368)
T cd08300 226 LA-KKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV 304 (368)
T ss_pred HH-HHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh
Confidence 66 78999999887653 23344444 8999999999866788999999886 999999976422 333333333
Q ss_pred cCCcEEEEeec---cCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 152 TGEKIVGGSLI---GGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.+.++.++.. ....+++++++++.++.+++. + ++|+|+++++||+.+.+++. .|++++
T Consensus 305 -~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 305 -TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred -hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 3346666543 245778999999999999863 5 89999999999999987765 588874
No 27
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.96 E-value=9.3e-28 Score=189.81 Aligned_cols=208 Identities=22% Similarity=0.262 Sum_probs=168.2
Q ss_pred cccCcceeeC----CCCCCcccc-cccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCC
Q 027668 2 VADEHFVVRI----PEGAPLDAT-APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS 75 (220)
Q Consensus 2 ~~~~~~~~~~----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~ 75 (220)
+++.+.+.++ |++++++++ +++++.+.|||+++.....+++|++|||+|+ |++|++++|+++..|++|++++++
T Consensus 93 ~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s 172 (325)
T TIGR02825 93 ISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS 172 (325)
T ss_pred EechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC
Confidence 3566676666 999999887 6889999999999877777899999999996 999999999999999999999998
Q ss_pred cccHHHHHHHcCCcEEecCCCH----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-----Cccc
Q 027668 76 PSKKSEAVERLGADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-----PLEL 145 (220)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-----~~~~ 145 (220)
+++.+.+ +++|++.++++.+. +.++...+ ++|++|||+|+. .+..++++++++|+++.+|.... ..+.
T Consensus 173 ~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~ 250 (325)
T TIGR02825 173 DEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPP 250 (325)
T ss_pred HHHHHHH-HHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCC
Confidence 8877666 78999999987653 22333333 799999999986 57899999999999999987532 1111
Q ss_pred --CccccccCCcEEEEeeccC------HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 146 --PAFPLLTGEKIVGGSLIGG------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 146 --~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
....+..+++++.++.... .+.++.+++++++|.+++.+ ..|+++++++|++.+.+++..+|+|++
T Consensus 251 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 251 GPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred CcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 1223566788888775421 34688899999999999876 789999999999999998888999863
No 28
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.96 E-value=2.7e-27 Score=190.17 Aligned_cols=206 Identities=23% Similarity=0.395 Sum_probs=170.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
++|++.++++|+++++++++++++.+.|+|+++.....+++|++|||+|+|++|++++|+++.+|+ +|+++++++++++
T Consensus 147 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~ 226 (369)
T cd08301 147 VVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFE 226 (369)
T ss_pred EEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 467889999999999999999999999999987766678999999999999999999999999999 7999999988877
Q ss_pred HHHHHcCCcEEecCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHhccccC-CEEEEecCCCCC--cccCccccc
Q 027668 81 EAVERLGADSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~iv~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +++|++.+++..+. +.+++..+ ++|++|||+|....+..++++++++ |+++.+|..... .+++...++
T Consensus 227 ~~-~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~ 305 (369)
T cd08301 227 QA-KKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL 305 (369)
T ss_pred HH-HHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh
Confidence 66 78999888876541 23344444 7999999999876688899999996 999999987543 334433333
Q ss_pred cCCcEEEEeecc---CHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 152 TGEKIVGGSLIG---GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
+++++.|+... .+.+++++++++.++.++.. + ++|+++++++||+.+.+++.. |+++
T Consensus 306 -~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 306 -NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred -cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 68999998653 24578999999999988753 4 899999999999999988864 8876
No 29
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.96 E-value=4.2e-27 Score=186.93 Aligned_cols=208 Identities=63% Similarity=1.002 Sum_probs=181.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++++++.+.+.+.+||+++.... +++|++++|.|+|++|++++++++.+|++++++++++++.+.
T Consensus 130 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~ 208 (337)
T cd05283 130 VVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKED 208 (337)
T ss_pred EechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4677899999999999999999999999999998776 799999999888999999999999999999999998887776
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEee
Q 027668 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSL 161 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~ 161 (220)
+ +++|++.+++..+.+..+...+++|++|||+|....+..++++++++|+++.+|.......++...++.++.++.++.
T Consensus 209 ~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~ 287 (337)
T cd05283 209 A-LKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSL 287 (337)
T ss_pred H-HHcCCcEEecCcchhhhhhccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEec
Confidence 6 689998888776654444444589999999998755889999999999999999865444566666678999999998
Q ss_pred ccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 162 IGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
....++++.++++++++.+++.+++++++++++||+.+.+++..+|+|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 288 IGGRKETQEMLDFAAEHGIKPWVEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ccCHHHHHHHHHHHHhCCCccceEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 88889999999999999998767889999999999999999988998874
No 30
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.96 E-value=6.5e-28 Score=191.70 Aligned_cols=203 Identities=16% Similarity=0.198 Sum_probs=156.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhcc--CCCCCCEEEEEcCchHHHHHHHHHHH-CCC-eEEEEeCCcc
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG--LDKPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPS 77 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~--~~~~~~~vlI~G~g~~G~~~~~~~~~-~g~-~v~~~~~~~~ 77 (220)
++|++.++++|+++++++|+.+ ..+.++|+++.... .+++|++|+|+|+|++|++++|+++. .|. +|++++++++
T Consensus 122 ~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~ 200 (341)
T cd08237 122 FLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQE 200 (341)
T ss_pred EEchHHeEECCCCCChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHh
Confidence 5788999999999999887744 47778888886432 35889999999999999999999986 664 8999998888
Q ss_pred cHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCC---cccHHHHHhccccCCEEEEecCCCCCcccCccccccCC
Q 027668 78 KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---VHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (220)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~ 154 (220)
+++.+ ++++....++ +...+ .++|+||||+|. ...+..++++++++|+++.+|......+++...++.++
T Consensus 201 k~~~a-~~~~~~~~~~----~~~~~--~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~ 273 (341)
T cd08237 201 KLDLF-SFADETYLID----DIPED--LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKG 273 (341)
T ss_pred HHHHH-hhcCceeehh----hhhhc--cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCc
Confidence 77666 5566553321 11111 279999999994 34688899999999999999976555566667778899
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhC-----CcceeE-EEEecccH---HHHHHHHHcCCcceEEEEEeC
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKH-----NIRADI-EVIPADYV---NTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~i-~~~~~~~i---~~a~~~~~~~~~~~k~v~~~~ 213 (220)
+++.|+..++..++++++++++++ .+++.+ ++|+++++ .++++.+.++ ..+|+|++++
T Consensus 274 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 274 LTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred eEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 999999887778899999999998 455556 88998655 5555444433 5689999864
No 31
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.96 E-value=1.8e-27 Score=190.09 Aligned_cols=207 Identities=27% Similarity=0.362 Sum_probs=174.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+ ..+.+||+++. ...+++|++|+|+|+|++|++++|+++.+|+ +|+++++++++.+
T Consensus 134 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~ 211 (351)
T cd08233 134 VVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAVR-RSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRE 211 (351)
T ss_pred EechHHeEECcCCCCHHHhhhc-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4677899999999999988765 57789999994 4558999999999999999999999999999 7888888887776
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCc
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEK 155 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~ 155 (220)
.+ +++|++.++++.+.+ .+.+..+ ++|++|||+|....+..++++++++|+++.+|......+++...++.+++
T Consensus 212 ~~-~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 290 (351)
T cd08233 212 LA-EELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEK 290 (351)
T ss_pred HH-HHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCc
Confidence 65 679999998877643 3444443 69999999997667889999999999999999876556677777788999
Q ss_pred EEEEeeccCHHHHHHHHHHHHhCCcce--eE-EEEecccH-HHHHHHHHcCCcc-eEEEEE
Q 027668 156 IVGGSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPADYV-NTAMERLAKADVR-YRFVID 211 (220)
Q Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i-~~a~~~~~~~~~~-~k~v~~ 211 (220)
++.++..+..+++++++++++++.+++ .+ ++|+++++ ++|++.+.+++.. +|+++.
T Consensus 291 ~i~g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 291 TLTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEEeccCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 999998777788999999999999964 35 79999996 7999999888864 899873
No 32
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.96 E-value=3.6e-27 Score=187.31 Aligned_cols=210 Identities=27% Similarity=0.354 Sum_probs=168.4
Q ss_pred cccCcceee-CCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccH
Q 027668 2 VADEHFVVR-IPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (220)
Q Consensus 2 ~~~~~~~~~-~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~ 79 (220)
.+|.+.+++ +|+++ +.+++++...+.+++++.......+++.+|+|+|+|++|++++++++..|+ +|++++.+++|+
T Consensus 128 ~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl 206 (350)
T COG1063 128 RVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL 206 (350)
T ss_pred EeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 466545555 58888 556666777888987774334435666699999999999999999999998 888888888888
Q ss_pred HHHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccCccccccC
Q 027668 80 SEAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTG 153 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~-~~~~~~~~~~ 153 (220)
+.+.+.+|++.+++..+. ..+.+.++ ++|++|||+|...++..+++.++++|+++.+|...... .++...++.+
T Consensus 207 ~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~k 286 (350)
T COG1063 207 ELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSK 286 (350)
T ss_pred HHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhc
Confidence 777444778877766552 34445554 69999999998888899999999999999999987654 6777788999
Q ss_pred CcEEEEeec-cCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCc-ceEEEEEe
Q 027668 154 EKIVGGSLI-GGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADV-RYRFVIDV 212 (220)
Q Consensus 154 ~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~-~~k~v~~~ 212 (220)
++++.|+.. ....+|+.+++++++|++++. + +.++++++++||+.+.+... ..|+++.+
T Consensus 287 el~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 287 ELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred ccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 999999955 566789999999999999976 3 88999999999999987554 46888764
No 33
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.95 E-value=2.6e-27 Score=183.50 Aligned_cols=189 Identities=23% Similarity=0.261 Sum_probs=157.0
Q ss_pred cccCc-ceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccH
Q 027668 2 VADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (220)
Q Consensus 2 ~~~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~ 79 (220)
++|++ .++++|++++++.++++.+.+.|+|+++++.. ..+|++|+|+|+|++|++++|+++.+|++ |++++++++++
T Consensus 80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~-~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhcc-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 56776 69999999999999999999999999997766 47999999999999999999999999996 88887777666
Q ss_pred HHHHHHcCCcEEecCCCH-HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCC--CCcccCccccccCC
Q 027668 80 SEAVERLGADSFLVSRDQ-DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTGE 154 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~-~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~--~~~~~~~~~~~~~~ 154 (220)
+.+ +++|++.+++..+. +.+.+.++ ++|++|||+|....++.++++++++|+++.+|... ...+++...++.++
T Consensus 159 ~~a-~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~ 237 (280)
T TIGR03366 159 ELA-LSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW 237 (280)
T ss_pred HHH-HHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence 554 78999988876543 33444443 79999999998877899999999999999999753 23567777888999
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhC--Ccce--eE-EEEecccH
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKH--NIRA--DI-EVIPADYV 192 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~--~~~~--~i-~~~~~~~i 192 (220)
+++.|+..++.++++++++++.++ .++. .+ ++|+++++
T Consensus 238 ~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 238 LTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 999999888888999999999985 4443 24 88998763
No 34
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.95 E-value=2.6e-27 Score=185.77 Aligned_cols=197 Identities=18% Similarity=0.183 Sum_probs=156.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
++|++.++++|++++++. +.+. ...+||+++++. ..++++++|+|+|++|++++|+++++|++ |++++..+++++
T Consensus 108 ~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~--~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~ 183 (308)
T TIGR01202 108 VTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGA--EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRD 183 (308)
T ss_pred EcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhc--ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 578889999999998764 4444 468999999764 34688999999999999999999999996 445555555544
Q ss_pred HHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEe
Q 027668 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGS 160 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~ 160 (220)
.+ +. ..++++.+. ..+++|++|||+|....++.++++++++|+++++|......+++...++.+++++.++
T Consensus 184 ~a-~~---~~~i~~~~~-----~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~ 254 (308)
T TIGR01202 184 GA-TG---YEVLDPEKD-----PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIA 254 (308)
T ss_pred hh-hh---ccccChhhc-----cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEe
Confidence 33 22 234443221 2248999999999976789999999999999999987655566666778899999998
Q ss_pred eccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 161 LIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
..+..++++++++++++|.+++. + ++|+++++++||+.+.++...+|++++
T Consensus 255 ~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 255 AEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 87778889999999999999874 4 899999999999998776666899874
No 35
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.95 E-value=9.7e-27 Score=186.08 Aligned_cols=205 Identities=21% Similarity=0.286 Sum_probs=156.2
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhc------cCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeC-
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY------GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST- 74 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~------~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~- 74 (220)
++|++.++++|++++ +.+ ++...+.++++++... ...++|++|+|+|+|++|++++|+++.+|++|+++++
T Consensus 128 ~~~~~~~~~~P~~~~-~~a-~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 128 VDDPEYLVKVPPSLA-DVG-VLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred EeccccEEECCCCCC-cce-eecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Confidence 578899999999998 443 3444444444443322 1246899999999999999999999999999999887
Q ss_pred --CcccHHHHHHHcCCcEEecCCCHHHH-HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccC---
Q 027668 75 --SPSKKSEAVERLGADSFLVSRDQDEM-QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELP--- 146 (220)
Q Consensus 75 --~~~~~~~~~~~~g~~~v~~~~~~~~~-~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~--- 146 (220)
++++++ +++++|++.+ ++.+.+.. ....+++|+||||+|....+..+++.++++|+++.+|...+ ..+++
T Consensus 206 ~~~~~~~~-~~~~~Ga~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~ 283 (355)
T cd08230 206 DPPDPKAD-IVEELGATYV-NSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGE 283 (355)
T ss_pred CCCHHHHH-HHHHcCCEEe-cCCccchhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhh
Confidence 455555 4478999874 44432211 12234899999999987678899999999999999998764 33444
Q ss_pred -ccccccCCcEEEEeeccCHHHHHHHHHHHHhCC------cceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 147 -AFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHN------IRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 147 -~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
...++.+++++.|+...+..+++++++++.++. +++.+ ++|+++++++||+.+.++. .|+++.+
T Consensus 284 ~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 284 LNRDLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hhhhHhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 245677999999998877888999999999876 44445 8999999999999886554 5999864
No 36
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.95 E-value=1.5e-26 Score=185.42 Aligned_cols=209 Identities=25% Similarity=0.305 Sum_probs=172.2
Q ss_pred cccCc-ceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccH
Q 027668 2 VADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (220)
Q Consensus 2 ~~~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~ 79 (220)
.++++ .++++|++++.+.++++++.+.|||+++......++|++|||+|+|++|++++++|+.+|+ +|+++++++++.
T Consensus 136 ~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~ 215 (361)
T cd08231 136 YLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERL 215 (361)
T ss_pred EecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 35554 7999999999999998889999999999888866799999999999999999999999999 899998888776
Q ss_pred HHHHHHcCCcEEecCCCH------HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccCccc
Q 027668 80 SEAVERLGADSFLVSRDQ------DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFP 149 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~------~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~~~~ 149 (220)
..+ +++|++.+++..+. ..+.+.++ ++|++|||+|....+..++++++++|+++.+|.... ..+++...
T Consensus 216 ~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 294 (361)
T cd08231 216 ELA-REFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPER 294 (361)
T ss_pred HHH-HHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHH
Confidence 655 78999888876542 23445543 799999999886568899999999999999997643 23444445
Q ss_pred cccCCcEEEEeeccCHHHHHHHHHHHHhC--Ccc--eeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 150 LLTGEKIVGGSLIGGLKETQEMIDFAAKH--NIR--ADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 150 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~--~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
++.++.++.++..++.++++++++++.++ .+. +.+ ++|+++++++||+.+.++.. +|+++.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 295 IVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred HhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 67889999999887788899999999988 443 334 88999999999999988764 7999863
No 37
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.95 E-value=2.2e-26 Score=183.06 Aligned_cols=209 Identities=32% Similarity=0.462 Sum_probs=176.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhc-cCCCCCCEEEEEcCchHHHHHHHHHHHCC-CeEEEEeCCcccH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~ 79 (220)
.++++.++++|+++++++++++++.+.|||+++... ..+.++++|||+|+|++|++++++++.+| .+|+++++++++.
T Consensus 126 ~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~ 205 (340)
T cd05284 126 LVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEAL 205 (340)
T ss_pred EecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 567789999999999999999999999999999776 45788999999999889999999999999 7999998888777
Q ss_pred HHHHHHcCCcEEecCCCH--HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCc
Q 027668 80 SEAVERLGADSFLVSRDQ--DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEK 155 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~--~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~ 155 (220)
+.+ +++|+++++++.+. +.+.+..+ ++|+++||+|.......++++++++|+++.+|.... ..++....+.++.
T Consensus 206 ~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~ 283 (340)
T cd05284 206 KLA-ERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEI 283 (340)
T ss_pred HHH-HHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcce
Confidence 666 78999888887654 33444443 799999999975568899999999999999987553 3444444457889
Q ss_pred EEEEeeccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 156 IVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
++.++.......+..++++++++.+.+.++.|+++++++|++.+.+++..+|+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 284 SVIGSLWGTRAELVEVVALAESGKVKVEITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred EEEEEecccHHHHHHHHHHHHhCCCCcceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 998887767788999999999999887668899999999999999888888998753
No 38
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.95 E-value=9.6e-27 Score=184.24 Aligned_cols=209 Identities=18% Similarity=0.201 Sum_probs=167.2
Q ss_pred cccCc---ceeeCCCCCCc-----ccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEE
Q 027668 2 VADEH---FVVRIPEGAPL-----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI 72 (220)
Q Consensus 2 ~~~~~---~~~~~p~~~~~-----~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~ 72 (220)
+++.+ .++++|++++. ..++++++.+.|||+++.....+++|++|||+|+ |++|++++|+++.+|++|+++
T Consensus 95 ~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~ 174 (329)
T cd08294 95 VSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGC 174 (329)
T ss_pred EECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE
Confidence 46777 99999999982 2234678899999999977777899999999996 999999999999999999999
Q ss_pred eCCcccHHHHHHHcCCcEEecCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--Cc---
Q 027668 73 STSPSKKSEAVERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PL--- 143 (220)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~--- 143 (220)
++++++.+.+ +++|++.++++.+.+ .+++..+ ++|++||++|.. .+..++++++++|+++.+|.... ..
T Consensus 175 ~~s~~~~~~l-~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~ 252 (329)
T cd08294 175 AGSDDKVAWL-KELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPK 252 (329)
T ss_pred eCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCC
Confidence 9888877666 679999999887643 3444443 899999999985 68899999999999999986421 11
Q ss_pred --ccCccccccCCcEEEEeeccCH-----HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 144 --ELPAFPLLTGEKIVGGSLIGGL-----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 144 --~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
......++.+++++.++..... +.++.++++++++.+++.. .+|+++++++|++.+.+++..+|+++++
T Consensus 253 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 253 KGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred cCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 1122345668888888764332 3367788999999998765 7899999999999999988889999863
No 39
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.95 E-value=1.2e-26 Score=183.39 Aligned_cols=204 Identities=17% Similarity=0.228 Sum_probs=165.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEE-c-CchHHHHHHHHHHHCCCeEEEEeCCcccH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-G-LGGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G-~g~~G~~~~~~~~~~g~~v~~~~~~~~~~ 79 (220)
++|++.++++|+++++++++++.+.+.|||.++... .. +++.++|+ | +|++|++++|+++.+|++|++++++++++
T Consensus 104 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~-~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~ 181 (324)
T cd08291 104 VADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETA-RE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQV 181 (324)
T ss_pred eecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhh-cc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 578889999999999999998888899998665433 33 55666665 4 59999999999999999999999988887
Q ss_pred HHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-c-ccCcccccc
Q 027668 80 SEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-L-ELPAFPLLT 152 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~-~~~~~~~~~ 152 (220)
+.+ +++|++.++++.+.+ .+.+.++ ++|++|||+|.. .....+++++++|+++.+|..... . .++...++.
T Consensus 182 ~~~-~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 259 (324)
T cd08291 182 DLL-KKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIF 259 (324)
T ss_pred HHH-HHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhh
Confidence 666 679999998876543 3444443 799999999987 467789999999999999975432 2 255556677
Q ss_pred CCcEEEEeeccC------HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 153 GEKIVGGSLIGG------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 153 ~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
++.++.++.... ...+++++++++ +.+++.+ ++|+++++++||+.+.+++..||+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 260 KNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred cCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence 899998876543 456788888888 8888877 89999999999999999888899987
No 40
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.95 E-value=8.7e-26 Score=179.44 Aligned_cols=210 Identities=25% Similarity=0.481 Sum_probs=174.8
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHH-CCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~-~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++++++.+.|||+++. ...+++|++|||+|+|++|++++++++. .|++|+++++++++++
T Consensus 123 ~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~ 201 (338)
T PRK09422 123 IVTADYAVKVPEGLDPAQASSITCAGVTTYKAIK-VSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLA 201 (338)
T ss_pred EEchHHeEeCCCCCCHHHeehhhcchhHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 4567789999999999999999999999999984 4558999999999999999999999998 5999999999988887
Q ss_pred HHHHHcCCcEEecCCC-H---HHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcE
Q 027668 81 EAVERLGADSFLVSRD-Q---DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKI 156 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~-~---~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
.+ +++|++.+++... . +.+.+..+++|.+|++.+....+..++++++.+|+++.+|......+++...+..++.+
T Consensus 202 ~~-~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 280 (338)
T PRK09422 202 LA-KEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIE 280 (338)
T ss_pred HH-HHcCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcE
Confidence 77 7899988887753 2 34444555789666555555578999999999999999987654445555566678888
Q ss_pred EEEeeccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEeC
Q 027668 157 VGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~~ 213 (220)
+.++.....+.++.++++++++.+.+.+..+++++++++++.+.++...+|+++.+.
T Consensus 281 ~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 281 VVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred EEEecCCCHHHHHHHHHHHHhCCCCccEEEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 888776677889999999999998776777899999999999998888899998753
No 41
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.94 E-value=2.4e-25 Score=177.39 Aligned_cols=210 Identities=14% Similarity=0.172 Sum_probs=159.7
Q ss_pred cccCcceeeCCCCCCccc----ccccchhhhhhhhhhHhccCCCCC--CEEEEEcC-chHHHHHHHHHHHCCC-eEEEEe
Q 027668 2 VADEHFVVRIPEGAPLDA----TAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVIS 73 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~~--~~vlI~G~-g~~G~~~~~~~~~~g~-~v~~~~ 73 (220)
++|++.++++|+++++.+ ++++...+.|||+++.....+++| ++|||+|+ |++|++++|+++++|+ +|++++
T Consensus 108 ~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~ 187 (345)
T cd08293 108 VLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGIC 187 (345)
T ss_pred EecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEc
Confidence 578899999999865443 446777899999999777667877 99999997 9999999999999999 899999
Q ss_pred CCcccHHHHHHHcCCcEEecCCCH---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC---CcccC
Q 027668 74 TSPSKKSEAVERLGADSFLVSRDQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK---PLELP 146 (220)
Q Consensus 74 ~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~---~~~~~ 146 (220)
+++++.+.+.+++|++.++++.+. +.+++.++ ++|++|||+|.. .+..++++++++|+++.+|.... ....+
T Consensus 188 ~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~ 266 (345)
T cd08293 188 GSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYP 266 (345)
T ss_pred CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCcc
Confidence 998887777556999999887653 34444444 899999999987 47899999999999999985321 11111
Q ss_pred c------ccc-ccCCcEEEEeeccC-----HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 147 A------FPL-LTGEKIVGGSLIGG-----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 147 ~------~~~-~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
. ..+ ..+..+..+..... .+.++.++++++++.+++.. ..++++++++|++.+.+++..+|+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 267 PPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred ccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 1 011 12333433332111 23467788899999998776 5679999999999999888889999864
No 42
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.94 E-value=1e-25 Score=183.18 Aligned_cols=210 Identities=18% Similarity=0.220 Sum_probs=163.2
Q ss_pred ceeeCCCCCCcccccccc---hhhhhhhhhhH--------hccCCCCCCEEEEEcC-chHHHHHHHHHHHCCC---eEEE
Q 027668 7 FVVRIPEGAPLDATAPLL---CAGITVYSPLR--------FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTV 71 (220)
Q Consensus 7 ~~~~~p~~~~~~~aa~~~---~~~~ta~~~l~--------~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~---~v~~ 71 (220)
.++++|+++++++++.+. +. .++++++. ....+++|++|+|+|+ |++|++++|+++.+|+ +|++
T Consensus 130 ~~~~lP~~l~~~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~ 208 (410)
T cd08238 130 DCLLIYEGDGYAEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVV 208 (410)
T ss_pred CeEECCCCCCHHHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEE
Confidence 589999999999887542 22 22343322 3345799999999985 9999999999999864 7999
Q ss_pred EeCCcccHHHHHHHc--------CCc-EEecCCC-H---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 027668 72 ISTSPSKKSEAVERL--------GAD-SFLVSRD-Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 72 ~~~~~~~~~~~~~~~--------g~~-~v~~~~~-~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~ 136 (220)
++.++++++.+ +++ |++ .++++.+ . +.+.+.++ ++|++||++|....+..++++++++|+++.+
T Consensus 209 ~~~~~~r~~~a-~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~ 287 (410)
T cd08238 209 TDVNDERLARA-QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFF 287 (410)
T ss_pred EcCCHHHHHHH-HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEE
Confidence 99998887776 555 655 4666543 2 33445554 7999999998877889999999999988876
Q ss_pred cCCC-C--CcccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 137 GAPE-K--PLELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 137 g~~~-~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
+... . ..+++...++.+++++.|+......+++++++++++|++++. + ++|+++++++||+.+. ++..+|+|+
T Consensus 288 ~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl 366 (410)
T cd08238 288 AGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLI 366 (410)
T ss_pred EccCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEE
Confidence 5432 2 245666678889999999988788899999999999999874 4 8999999999999998 667799999
Q ss_pred EeCCccccC
Q 027668 211 DVANTMKST 219 (220)
Q Consensus 211 ~~~~~~~~~ 219 (220)
.++-.++.|
T Consensus 367 ~~~~~~~~~ 375 (410)
T cd08238 367 YTQKPLPLT 375 (410)
T ss_pred ECCCCCCCc
Confidence 986554433
No 43
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.94 E-value=8e-26 Score=168.54 Aligned_cols=211 Identities=22% Similarity=0.211 Sum_probs=171.4
Q ss_pred ccCcceeeCCCCCCcccc--cccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccH
Q 027668 3 ADEHFVVRIPEGAPLDAT--APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (220)
Q Consensus 3 ~~~~~~~~~p~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~ 79 (220)
.+.+.+.|++.+.-+..+ ..+.+.+.|||.+|..++..++|++|+|-|| |++|..+.|+||..|++|+.++.++++.
T Consensus 109 ~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~ 188 (340)
T COG2130 109 SDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKC 188 (340)
T ss_pred echhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHH
Confidence 345667777643322222 2678899999999999999999999999986 9999999999999999999999999999
Q ss_pred HHHHHHcCCcEEecCCCHHHHHHh---c-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC---C-cc--cC-cc
Q 027668 80 SEAVERLGADSFLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK---P-LE--LP-AF 148 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~---~-~~--~~-~~ 148 (220)
+.+.+.+|++.++|++..+..+.+ . +|+|+.||++|+. .++..+..|+..+|++.+|..+. . .+ .. ..
T Consensus 189 ~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~ 267 (340)
T COG2130 189 DFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLP 267 (340)
T ss_pred HHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhh
Confidence 988777999999999986543333 3 3999999999998 69999999999999999997642 1 11 11 22
Q ss_pred ccccCCcEEEEeeccC------HHHHHHHHHHHHhCCcceeEEE-EecccHHHHHHHHHcCCcceEEEEEeCC
Q 027668 149 PLLTGEKIVGGSLIGG------LKETQEMIDFAAKHNIRADIEV-IPADYVNTAMERLAKADVRYRFVIDVAN 214 (220)
Q Consensus 149 ~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~-~~~~~i~~a~~~~~~~~~~~k~v~~~~~ 214 (220)
.++.+.+++.|+...+ .+..+++.+|+++|+|+....+ -.+|++++||.-|.++++.||.|+++.+
T Consensus 268 ~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 268 LLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 3466789999987722 2457788999999999998854 4599999999999999999999999753
No 44
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.94 E-value=1.4e-25 Score=181.70 Aligned_cols=207 Identities=20% Similarity=0.260 Sum_probs=172.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhc--cCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~ 78 (220)
.++...++++|+++++++++.+.+.+.|||+++... ..++++++|+|+|+ |++|++++++++.+|+++++++.++++
T Consensus 151 ~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~ 230 (393)
T cd08246 151 LVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEK 230 (393)
T ss_pred EechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 467789999999999999999999999999998755 56789999999997 999999999999999999888888887
Q ss_pred HHHHHHHcCCcEEecCCCH-------------------------HHHHHhcC---CccEEEEcCCCcccHHHHHhccccC
Q 027668 79 KSEAVERLGADSFLVSRDQ-------------------------DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQ 130 (220)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~-------------------------~~~~~~~~---~~d~vid~~g~~~~~~~~~~~l~~~ 130 (220)
++.+ +++|++.+++.++. +.+.++++ ++|++|||+|.. .+..++++++++
T Consensus 231 ~~~~-~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~ 308 (393)
T cd08246 231 AEYC-RALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRG 308 (393)
T ss_pred HHHH-HHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccC
Confidence 7666 67999888875321 22333443 699999999985 688999999999
Q ss_pred CEEEEecCCCC-CcccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcC-CcceE
Q 027668 131 GKLVLLGAPEK-PLELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKA-DVRYR 207 (220)
Q Consensus 131 g~iv~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~-~~~~k 207 (220)
|+++.+|.... ..+++...+..++.++.++.....+.+..++++++++.+.+.+ ++|+++++++|++.+.++ +..+|
T Consensus 309 G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gk 388 (393)
T cd08246 309 GMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGN 388 (393)
T ss_pred CEEEEEcccCCCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccce
Confidence 99999986543 2345555667788899998877778899999999999988765 899999999999999988 67788
Q ss_pred EEE
Q 027668 208 FVI 210 (220)
Q Consensus 208 ~v~ 210 (220)
+++
T Consensus 389 vvv 391 (393)
T cd08246 389 MAV 391 (393)
T ss_pred EEE
Confidence 876
No 45
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.94 E-value=1.8e-25 Score=177.81 Aligned_cols=209 Identities=34% Similarity=0.604 Sum_probs=177.4
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+...+.|||+++... .+++++++||+|+ +.+|++++++++++|++|+++++++++.+
T Consensus 126 ~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 204 (341)
T cd08297 126 IADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE 204 (341)
T ss_pred EeccccEEECCCCCCHHHHHHHHcchHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 467889999999999999999999999999998776 5899999999997 67999999999999999999999988877
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +++|++.+++..+.+ .+.+.. +++|++|||.+.......++++++++|+++.+|..... .+++...++.++
T Consensus 205 ~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 283 (341)
T cd08297 205 LA-KELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRG 283 (341)
T ss_pred HH-HHcCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcc
Confidence 66 789998888876543 344443 27999999887666788999999999999999876543 255555556789
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.++.+......+.++.++++++++.+.+.++.|++++++++++.+..+...+|+++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 284 ITIVGSLVGTRQDLQEALEFAARGKVKPHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred cEEEEeccCCHHHHHHHHHHHHcCCCcceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9999877666788999999999999987668899999999999999888888999875
No 46
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.94 E-value=1.9e-25 Score=178.32 Aligned_cols=209 Identities=27% Similarity=0.368 Sum_probs=174.4
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++++.+.+.+||++++....+.++++|+|+|+|++|++++|+++..|+ +|++++.++++.+
T Consensus 135 ~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~ 214 (350)
T cd08240 135 IVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLE 214 (350)
T ss_pred EecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 456778899999999999999999999999999888766789999999889999999999999999 7888888877766
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcE
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKI 156 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
.+ +++|++.+++..+. +.+.+..+ ++|++||++|....+..++++++++|+++.+|.......++......++.+
T Consensus 215 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 293 (350)
T cd08240 215 AA-KAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALT 293 (350)
T ss_pred HH-HHhCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcE
Confidence 66 78999888876653 23333333 799999999976578899999999999999987654433343344558889
Q ss_pred EEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 157 VGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
+.++.....+++..++++++++.+.+.. ..+++++++++++.+.+++..+|+++.
T Consensus 294 i~~~~~~~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 294 IQGSYVGSLEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEEcccCCHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 9988877778899999999999988654 899999999999999988877898875
No 47
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.94 E-value=2e-25 Score=176.27 Aligned_cols=207 Identities=20% Similarity=0.279 Sum_probs=170.8
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.+++..++++|+++++++++.+++.+.++|+++.. ..+++|++|+|+|+ |.+|++++|+|+.+|++++++.+++++++
T Consensus 100 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~ 178 (324)
T cd08292 100 VAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA 178 (324)
T ss_pred EEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 46778899999999999999999999999999865 56899999999987 99999999999999999999999888877
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~ 154 (220)
.+ +++|++.+++..+.+ .+.+.++ ++|++|||+|.. ....++++++++|+++.+|.... ..+++....+.++
T Consensus 179 ~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (324)
T cd08292 179 EL-RALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQ 256 (324)
T ss_pred HH-HhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCC
Confidence 77 468998888776543 3444443 799999999986 57899999999999999987532 2445555566789
Q ss_pred cEEEEeeccC----------HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIGG----------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~~----------~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.++.... ...+..+++++.++.+.+.+ +.|+++++++|++.+.+....+|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 257 ATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred CEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 9998876532 24578899999999998665 899999999999999877767888863
No 48
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.94 E-value=5.5e-25 Score=177.58 Aligned_cols=209 Identities=17% Similarity=0.207 Sum_probs=156.1
Q ss_pred cccC--cceeeCCCCCCc----ccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEE-eC
Q 027668 2 VADE--HFVVRIPEGAPL----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVI-ST 74 (220)
Q Consensus 2 ~~~~--~~~~~~p~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~-~~ 74 (220)
++|+ ..++++|++++. ..++++.+.+.++|+++.+ ..+++|++|+|.|+|++|++++|+++.+|++++++ +.
T Consensus 140 ~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~ 218 (393)
T TIGR02819 140 MVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDL 218 (393)
T ss_pred EechhhCceEECCCcccccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Confidence 4554 369999998754 3567788889999999876 45899999999989999999999999999975554 45
Q ss_pred CcccHHHHHHHcCCcEEecCCC---HHHHHHhcC--CccEEEEcCCCc--------------ccHHHHHhccccCCEEEE
Q 027668 75 SPSKKSEAVERLGADSFLVSRD---QDEMQAAMG--TMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVL 135 (220)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~--~~d~vid~~g~~--------------~~~~~~~~~l~~~g~iv~ 135 (220)
++++++.+ +++|++.+....+ .+.+.+.++ ++|++|||+|.+ .+++.+++.++++|+++.
T Consensus 219 ~~~r~~~a-~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~ 297 (393)
T TIGR02819 219 NPARLAQA-RSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGI 297 (393)
T ss_pred CHHHHHHH-HHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEE
Confidence 55555544 7899975433322 234555554 799999999986 368999999999999999
Q ss_pred ecCCC-CCc------------ccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCccee---E-EEEecccHHHHHHH
Q 027668 136 LGAPE-KPL------------ELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRAD---I-EVIPADYVNTAMER 198 (220)
Q Consensus 136 ~g~~~-~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---i-~~~~~~~i~~a~~~ 198 (220)
+|.+. +.. ++.....+.++.++.++.....+.+..+++++++|++++. + ++|+++++++||+.
T Consensus 298 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~ 377 (393)
T TIGR02819 298 PGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE 377 (393)
T ss_pred eeecCCcccccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence 99863 111 2223344566777776543333334789999999998753 3 68999999999999
Q ss_pred HHcCCcceEEEEEeC
Q 027668 199 LAKADVRYRFVIDVA 213 (220)
Q Consensus 199 ~~~~~~~~k~v~~~~ 213 (220)
+.++. ..|+++.++
T Consensus 378 ~~~~~-~~Kvvi~~~ 391 (393)
T TIGR02819 378 FDAGA-AKKFVIDPH 391 (393)
T ss_pred HhhCC-ceEEEEeCC
Confidence 98775 489999874
No 49
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.94 E-value=3.5e-25 Score=175.87 Aligned_cols=210 Identities=32% Similarity=0.435 Sum_probs=178.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++.+++.+...+.+||+++.....++++++|||.|+|.+|++++++++..|++|++++.++++.+.
T Consensus 125 ~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~ 204 (338)
T cd08254 125 VVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLEL 204 (338)
T ss_pred EechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 46678899999999999999999999999999988877899999999888999999999999999999999998887776
Q ss_pred HHHHcCCcEEecCCCHH---HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEE
Q 027668 82 AVERLGADSFLVSRDQD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIV 157 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~---~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i 157 (220)
+ +++|.+.+++..+.. .+.... +++|+++||+|....+..++++++++|+++.+|.......++...++.++.++
T Consensus 205 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 283 (338)
T cd08254 205 A-KELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRI 283 (338)
T ss_pred H-HHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEE
Confidence 6 779988887766532 221222 27999999998766788999999999999999876544555556677788899
Q ss_pred EEeeccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 158 GGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.++.......+..++++++++.+.+.++.+++++++++++.+.+++..+|+++++
T Consensus 284 ~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 284 IGSFGGTPEDLPEVLDLIAKGKLDPQVETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred EEeccCCHHHHHHHHHHHHcCCCcccceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9887777788999999999999887678899999999999999888888999864
No 50
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=4.3e-25 Score=176.26 Aligned_cols=207 Identities=22% Similarity=0.267 Sum_probs=171.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++.+.+.|||+++. ...+++|++++|+|+ |++|++++++++.+|++++++++++ +++
T Consensus 138 ~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~ 215 (350)
T cd08274 138 VVPAENAYPVNSPLSDVELATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEE 215 (350)
T ss_pred EecHHHceeCCCCCCHHHHHhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhH
Confidence 4667789999999999999999999999999984 456899999999997 9999999999999999998888665 665
Q ss_pred HHHHHcCCcEEecCCCHHHH-HHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCCcE
Q 027668 81 EAVERLGADSFLVSRDQDEM-QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEKI 156 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~-~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~~~ 156 (220)
.+ +++|++.+++....... ...+ .++|++|||+|.. .+..++++++++|+++.+|..... .+++...++.++.+
T Consensus 216 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 293 (350)
T cd08274 216 AV-RALGADTVILRDAPLLADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLT 293 (350)
T ss_pred HH-HhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceE
Confidence 55 78998766554432111 2222 2899999999986 688999999999999999875433 45666666788999
Q ss_pred EEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 157 VGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
+.++.....+.+.++++++.++.+++.+ +.+++++++++++.+..+...+|+++.+
T Consensus 294 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 294 LFGSTLGTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred EEEeecCCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 9998888888899999999999988765 8999999999999999887778998763
No 51
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.94 E-value=8.4e-25 Score=177.37 Aligned_cols=214 Identities=21% Similarity=0.260 Sum_probs=177.2
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHh--ccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRF--YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~ 78 (220)
.++.+.++++|+++++++++.+.+.+.+||+++.. ...+.+|++++|+|+ |++|++++++++.+|+++++++.++++
T Consensus 147 ~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~ 226 (398)
T TIGR01751 147 LVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK 226 (398)
T ss_pred EechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence 46778899999999999999999999999999865 455789999999997 999999999999999998888888777
Q ss_pred HHHHHHHcCCcEEecCCCH-------------------------HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCC
Q 027668 79 KSEAVERLGADSFLVSRDQ-------------------------DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQG 131 (220)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~-------------------------~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g 131 (220)
++.+ +++|++.++++.+. ..+.+.++ ++|++|||+|.. .+..++++++++|
T Consensus 227 ~~~~-~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G 304 (398)
T TIGR01751 227 AEYC-RELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGG 304 (398)
T ss_pred HHHH-HHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCC
Confidence 6666 67999888876432 11223333 799999999975 5888999999999
Q ss_pred EEEEecCCCCC-cccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEE
Q 027668 132 KLVLLGAPEKP-LELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFV 209 (220)
Q Consensus 132 ~iv~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v 209 (220)
+++.+|..... .+++...+..++.++.++......++..++++++++.+.+.+ +++++++++++++.+..++..+|+|
T Consensus 305 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvv 384 (398)
T TIGR01751 305 MVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVA 384 (398)
T ss_pred EEEEEccccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEE
Confidence 99999976532 445555566778888888777777788999999999988766 8999999999999999888889999
Q ss_pred EEeCCccc
Q 027668 210 IDVANTMK 217 (220)
Q Consensus 210 ~~~~~~~~ 217 (220)
+.+....+
T Consensus 385 v~~~~~~~ 392 (398)
T TIGR01751 385 VLVLAPRP 392 (398)
T ss_pred EEeCCCCC
Confidence 99876543
No 52
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.93 E-value=8.3e-25 Score=175.72 Aligned_cols=209 Identities=23% Similarity=0.417 Sum_probs=172.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+...+.|||+++.....+.++++|+|+|+|++|++++++++.+|++ +++++.++++.+
T Consensus 147 ~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~ 226 (367)
T cd08263 147 VVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLA 226 (367)
T ss_pred EechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 4667899999999999999999999999999998887789999999998899999999999999997 888888877766
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccCccccccC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~~~~~~~~ 153 (220)
.+ +++|++.+++..+.+ .+....+ ++|++||++++......++++++++|+++.+|.... ...++...++.+
T Consensus 227 ~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 305 (367)
T cd08263 227 KA-KELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRR 305 (367)
T ss_pred HH-HHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhC
Confidence 55 789998888876543 3333332 799999999986457889999999999999986543 234455555568
Q ss_pred CcEEEEeeccC-HHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 154 EKIVGGSLIGG-LKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 154 ~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
+.++.++.... .+.++.++++++++.+.+. + +.+++++++++++.+.+++..||+|++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 306 GIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 88888765433 4678899999999998863 3 789999999999999988888899874
No 53
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.93 E-value=2.2e-24 Score=171.85 Aligned_cols=204 Identities=23% Similarity=0.290 Sum_probs=172.0
Q ss_pred ceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc
Q 027668 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86 (220)
Q Consensus 7 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 86 (220)
.++++|+++++++++.+...+.+||+++.....+.++++|+|+|+|++|++++++++.+|++|+++++++++.+.+ +++
T Consensus 130 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~ 208 (345)
T cd08260 130 NLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-REL 208 (345)
T ss_pred ceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHh
Confidence 8999999999999999999999999998777778999999999999999999999999999999999998887777 679
Q ss_pred CCcEEecCCC-HHH---HHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC---cccCccccccCCcEEE
Q 027668 87 GADSFLVSRD-QDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP---LELPAFPLLTGEKIVG 158 (220)
Q Consensus 87 g~~~v~~~~~-~~~---~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~---~~~~~~~~~~~~~~i~ 158 (220)
|++.+++..+ .+. +..... ++|.+|||+|....+...+++++++|+++.+|..... ..++...+..++.++.
T Consensus 209 g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08260 209 GAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIV 288 (345)
T ss_pred CCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEE
Confidence 9988888776 332 233333 7999999998655688899999999999999876432 2344444557888999
Q ss_pred EeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 159 GSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
++.......++.++++++++.+.+. + +.++++++++|++.+.+++..+|+|++
T Consensus 289 ~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 289 GSHGMPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred eCCcCCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 8877777889999999999988753 4 899999999999999988888888864
No 54
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.93 E-value=2.2e-24 Score=172.32 Aligned_cols=205 Identities=18% Similarity=0.237 Sum_probs=163.0
Q ss_pred cceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHH
Q 027668 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (220)
Q Consensus 6 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~ 84 (220)
..++++|+++++++++.++..+.|+++++.. ..+++|++|||+|+|++|++++|+++.+|+ .++++++++++.+.+ +
T Consensus 131 ~~~~~lP~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~ 208 (351)
T cd08285 131 ANLAPLPDGLTDEQAVMLPDMMSTGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELA-K 208 (351)
T ss_pred CceEECCCCCCHHHhhhhccchhhHHHHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-H
Confidence 3899999999999999999999999999754 458999999999999999999999999999 577777777666554 7
Q ss_pred HcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccCc--cccccCCc
Q 027668 85 RLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPA--FPLLTGEK 155 (220)
Q Consensus 85 ~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~--~~~~~--~~~~~~~~ 155 (220)
++|++.+++..+. +.+.+..+ ++|++|||+|+...+..++++++++|+++.+|..... ..++. +....+..
T Consensus 209 ~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T cd08285 209 EYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHK 288 (351)
T ss_pred HcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhcccc
Confidence 8999988887653 33434443 7999999999866788999999999999999876542 23331 22234566
Q ss_pred EEEEeecc-CHHHHHHHHHHHHhCCcce---eE-EEEecccHHHHHHHHHcCCc-ceEEEEEe
Q 027668 156 IVGGSLIG-GLKETQEMIDFAAKHNIRA---DI-EVIPADYVNTAMERLAKADV-RYRFVIDV 212 (220)
Q Consensus 156 ~i~~~~~~-~~~~~~~~~~~~~~~~~~~---~i-~~~~~~~i~~a~~~~~~~~~-~~k~v~~~ 212 (220)
++.+.... ..+.++++++++++|.+.+ .+ +.|+++++++|++.+.+++. ..|+++.+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 289 TINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred EEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 77665543 4567899999999999987 23 56999999999999998874 57999864
No 55
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.93 E-value=2.6e-24 Score=172.66 Aligned_cols=208 Identities=24% Similarity=0.356 Sum_probs=168.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
.++++.++++|++++++.++.+++.+.||++++.....++++++|+|+|+|++|++++|+++..|+ +++++++++++.+
T Consensus 146 ~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~ 225 (365)
T cd08278 146 VVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLE 225 (365)
T ss_pred EecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998777778999999999989999999999999999 5888878777765
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCC--CCcccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~--~~~~~~~~~~~~~~ 154 (220)
.+ +++|++.++++.+. +.+.+..+ ++|+++||+|....+..++++++++|+++.+|... ....++...++.++
T Consensus 226 ~~-~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 304 (365)
T cd08278 226 LA-KELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSG 304 (365)
T ss_pred HH-HHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcC
Confidence 44 78999888887653 33444333 89999999997667889999999999999999753 23455655555788
Q ss_pred cEEEEeecc---CHHHHHHHHHHHHhCCcce-eE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIG---GLKETQEMIDFAAKHNIRA-DI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~---~~~~~~~~~~~~~~~~~~~-~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.++... ..+.+++++++++++.+.+ .+ ..++++++++|++.+.+++. .|++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 305 KTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred ceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence 888876542 2355788999999998865 23 78999999999999987765 487763
No 56
>PRK10083 putative oxidoreductase; Provisional
Probab=99.93 E-value=4.9e-24 Score=169.51 Aligned_cols=209 Identities=19% Similarity=0.164 Sum_probs=162.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHH-CCCe-EEEEeCCcccH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVK-VTVISTSPSKK 79 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~-~g~~-v~~~~~~~~~~ 79 (220)
.++.+.++++|++++++.++ +...+.++++++. ...+++|++|+|+|+|++|++++|+++. +|++ ++++++++++.
T Consensus 122 ~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~ 199 (339)
T PRK10083 122 VVPAKNAHRIPDAIADQYAV-MVEPFTIAANVTG-RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERL 199 (339)
T ss_pred EechHHeEECcCCCCHHHHh-hhchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHH
Confidence 46778899999999988876 5566777786554 4568999999999999999999999996 6995 66666666665
Q ss_pred HHHHHHcCCcEEecCCCHHHHHHhcC---CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcE
Q 027668 80 SEAVERLGADSFLVSRDQDEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKI 156 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~~---~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
+.+ +++|++.+++..+.+..+.+.+ ++|++||++|....+..++++++++|+++.+|.......++...+..++++
T Consensus 200 ~~~-~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 278 (339)
T PRK10083 200 ALA-KESGADWVINNAQEPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELS 278 (339)
T ss_pred HHH-HHhCCcEEecCccccHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceE
Confidence 544 7899998988765433333322 467999999976678999999999999999997654333344444567788
Q ss_pred EEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCC-cceEEEEEeCC
Q 027668 157 VGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKAD-VRYRFVIDVAN 214 (220)
Q Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~-~~~k~v~~~~~ 214 (220)
+.++.. ....++.++++++++.+++. + +.|+++++++|++.+.++. ..+|+++.+.+
T Consensus 279 ~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 279 IFSSRL-NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred EEEEec-ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 877654 45679999999999999873 4 8999999999999998654 45899998754
No 57
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.93 E-value=4.3e-24 Score=169.72 Aligned_cols=207 Identities=22% Similarity=0.286 Sum_probs=167.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
.++++ ++++|+++++++++.+ ..+.++++++ ....+.+|++|||+|+|.+|++++|+|+.+|++|+++.+++++.+.
T Consensus 122 ~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~ 198 (337)
T cd08261 122 VVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEF 198 (337)
T ss_pred Eechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHH
Confidence 45677 9999999999999876 5677888887 4556899999999988999999999999999999999888777766
Q ss_pred HHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcE
Q 027668 82 AVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKI 156 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
+ +++|+++++++.+. +.+.+..+ ++|++|||+|....+..++++++++|+++.+|.......++...+..++.+
T Consensus 199 ~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~ 277 (337)
T cd08261 199 A-RELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELT 277 (337)
T ss_pred H-HHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCE
Confidence 6 78999888887753 33444433 699999999876568889999999999999986654444444455567778
Q ss_pred EEEeeccCHHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCC-cceEEEEEe
Q 027668 157 VGGSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKAD-VRYRFVIDV 212 (220)
Q Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~-~~~k~v~~~ 212 (220)
+.++.....+.++.+++++.++.+.+ .+ .++++++++++++.+.+++ ..+|+|+++
T Consensus 278 ~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 278 ILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred EEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 87776566677899999999999987 44 8999999999999998874 668999864
No 58
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.93 E-value=3.9e-24 Score=171.62 Aligned_cols=206 Identities=21% Similarity=0.349 Sum_probs=167.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++.+.+.+.+||+++.....+++|++|||+|+|++|++++++++.+|++ ++++++++++++
T Consensus 143 ~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~ 222 (365)
T cd05279 143 VVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFE 222 (365)
T ss_pred EecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 4677899999999999999999999999999887777789999999999999999999999999995 667676777766
Q ss_pred HHHHHcCCcEEecCCCH--H---HHHHhcC-CccEEEEcCCCcccHHHHHhccc-cCCEEEEecCCC--CCcccCccccc
Q 027668 81 EAVERLGADSFLVSRDQ--D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLLGAPE--KPLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~---~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~-~~g~iv~~g~~~--~~~~~~~~~~~ 151 (220)
.+ +++|++.+++..+. + .+.+..+ ++|++||++|....+..++++++ ++|+++.+|... ....++...+
T Consensus 223 ~~-~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~- 300 (365)
T cd05279 223 KA-KQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL- 300 (365)
T ss_pred HH-HHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-
Confidence 66 78999888876654 2 2333333 89999999987657889999999 999999998754 3355555555
Q ss_pred cCCcEEEEeec---cCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 152 TGEKIVGGSLI---GGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.++.++.|+.. ...+.+..++++++++.+.+. . ++++++++++||+.+.+++. .|+++
T Consensus 301 ~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 301 LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence 57788888744 345778899999999998763 3 89999999999999987664 46665
No 59
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.93 E-value=5.8e-24 Score=169.21 Aligned_cols=207 Identities=20% Similarity=0.234 Sum_probs=162.8
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
+++.+.++++|+++++++++ +...+.+||+++ ....+++|++|+|+|+|++|++++|+++.+|++ ++++++++++.+
T Consensus 123 ~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 200 (341)
T cd08262 123 LLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRA 200 (341)
T ss_pred EechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 56778999999999998876 677888999986 455689999999999899999999999999996 555555665555
Q ss_pred HHHHHcCCcEEecCCCHHH------HHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCcccccc
Q 027668 81 EAVERLGADSFLVSRDQDE------MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~------~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~ 152 (220)
..+++|++.++++.+.+. +.... +++|++||++|....+..++++++++|+++.+|...............
T Consensus 201 -~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 279 (341)
T cd08262 201 -LALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIR 279 (341)
T ss_pred -HHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhh
Confidence 447899988887664321 12222 279999999988545788999999999999998764333333333345
Q ss_pred CCcEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 153 GEKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 153 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
++.++.++.....+.++.++++++++.+.+. + +.+++++++++++.+.+++..+|+|++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 280 KELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred cceEEEEEecccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 7788877766677789999999999998752 3 899999999999999988888899874
No 60
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.93 E-value=3.8e-24 Score=169.81 Aligned_cols=206 Identities=23% Similarity=0.326 Sum_probs=170.3
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+.+.+.++|+++... .++++++++|+|+ |.+|++++++++.+|++++++++++++++
T Consensus 123 ~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~ 201 (334)
T PRK13771 123 KVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAK 201 (334)
T ss_pred ecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 567789999999999999999999999999999887 6899999999997 99999999999999999999999888877
Q ss_pred HHHHHcCCcEEecCCC-HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc--ccCccccccCCcEE
Q 027668 81 EAVERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL--ELPAFPLLTGEKIV 157 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~--~~~~~~~~~~~~~i 157 (220)
.+ +++ ++.+++..+ .+.+.+. +++|++|||+|+. ....++++++++|+++.+|...... .......+.++.++
T Consensus 202 ~~-~~~-~~~~~~~~~~~~~v~~~-~~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 277 (334)
T PRK13771 202 IV-SKY-ADYVIVGSKFSEEVKKI-GGADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEI 277 (334)
T ss_pred HH-HHH-HHHhcCchhHHHHHHhc-CCCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEE
Confidence 66 667 665665542 1233333 4799999999986 5889999999999999999764322 23333345678888
Q ss_pred EEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 158 GGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.+......++++.++++++++.+++.+ +.++++++++|++.+.++...+|+++.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 278 IGHISATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred EEecCCCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 887666788899999999999988666 8999999999999999887778998864
No 61
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.93 E-value=3.7e-25 Score=188.13 Aligned_cols=214 Identities=21% Similarity=0.253 Sum_probs=178.8
Q ss_pred CcccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEc-CchHHHHHHHHHHHCCCeEEEEeCCcccH
Q 027668 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (220)
Q Consensus 1 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G-~g~~G~~~~~~~~~~g~~v~~~~~~~~~~ 79 (220)
|.++.+.+|.+|.+..+++|+..++.|.|+|++|-..+..++|++|||++ +|++|+++|.+|.+.|++|+.++.+.+++
T Consensus 1511 ~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKR 1590 (2376)
T KOG1202|consen 1511 VLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKR 1590 (2376)
T ss_pred hhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHH
Confidence 35678899999999999999999999999999998888899999999995 59999999999999999999999999999
Q ss_pred HHHHHHcC---CcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCcccc
Q 027668 80 SEAVERLG---ADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPL 150 (220)
Q Consensus 80 ~~~~~~~g---~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~ 150 (220)
+.+.+.|. ...+-|+++. ..+.+.++ |+|+|+++.... .++..++||+-+|++..+|-.+-+ .+.-.+..
T Consensus 1591 efL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMav 1669 (2376)
T KOG1202|consen 1591 EFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAV 1669 (2376)
T ss_pred HHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhh
Confidence 99988887 3445565552 34445553 999999999987 599999999999999999976532 22223445
Q ss_pred ccCCcEEEEeec-----cCHHHHHHHHHHHHhCC----cceeE-EEEecccHHHHHHHHHcCCcceEEEEEeCCc
Q 027668 151 LTGEKIVGGSLI-----GGLKETQEMIDFAAKHN----IRADI-EVIPADYVNTAMERLAKADVRYRFVIDVANT 215 (220)
Q Consensus 151 ~~~~~~i~~~~~-----~~~~~~~~~~~~~~~~~----~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~~~~ 215 (220)
+.++.+++|... ...++|+++..++++|. ..|.. ++|+-+++++||+.|.+++..||+|++.-.+
T Consensus 1670 fLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1670 FLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred hhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence 679999998755 44577899999998873 44544 8999999999999999999999999998554
No 62
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.93 E-value=8.3e-24 Score=168.60 Aligned_cols=208 Identities=19% Similarity=0.268 Sum_probs=166.7
Q ss_pred ccCc--ceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCC-CeEEEEeCCcccH
Q 027668 3 ADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (220)
Q Consensus 3 ~~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~ 79 (220)
++.+ .++++|++++..+++.+.+.+.+||+++.....+.++++++|.|+|.+|++++|+++.+| .+++++++++++.
T Consensus 125 v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~ 204 (345)
T cd08286 125 IPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRL 204 (345)
T ss_pred cccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 4544 899999999999999999999999987666667899999999999999999999999999 5888877777665
Q ss_pred HHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCC
Q 027668 80 SEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~ 154 (220)
. +.+++|++.+++..+.+ .+.+..+ ++|++|||+|....+..+++.++++|+++.+|......++++..++.++
T Consensus 205 ~-~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 283 (345)
T cd08286 205 E-VAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKN 283 (345)
T ss_pred H-HHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcC
Confidence 5 44789998888876532 2333333 7999999998766688889999999999999975544556666667789
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCC--cceEEEEEe
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKAD--VRYRFVIDV 212 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~--~~~k~v~~~ 212 (220)
.++.+.... .+.+..++++++++.+.+. + +++++++++++++.+.... ...|+++++
T Consensus 284 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 284 ITITTGLVD-TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred cEEEeecCc-hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 998876442 2568889999999988752 3 8999999999999998653 346998864
No 63
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.92 E-value=5.6e-24 Score=169.29 Aligned_cols=209 Identities=20% Similarity=0.281 Sum_probs=169.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCc----
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---- 76 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~---- 76 (220)
.++.+.++++|+++++++++.+++.+.|+|+++.....+++|++|||+|+ |++|++++|+|++.|++++++++++
T Consensus 106 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 185 (341)
T cd08290 106 VVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLE 185 (341)
T ss_pred eccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcch
Confidence 46778999999999999999999999999999987777899999999987 9999999999999999998888876
Q ss_pred ccHHHHHHHcCCcEEecCCCH---H---HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCcc
Q 027668 77 SKKSEAVERLGADSFLVSRDQ---D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAF 148 (220)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~---~---~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~ 148 (220)
++.+.+ +++|++.+++..+. + .+....+ ++|.+|||+|.. .+...+++++++|+++.+|.... ...++..
T Consensus 186 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 263 (341)
T cd08290 186 ELKERL-KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTS 263 (341)
T ss_pred hHHHHH-HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHH
Confidence 445555 77999888876653 2 2333333 699999999987 57789999999999999986442 2344554
Q ss_pred ccccCCcEEEEeeccCH----------HHHHHHHHHHHhCCcceeE-EEE---ecccHHHHHHHHHcCCcceEEEEEe
Q 027668 149 PLLTGEKIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVI---PADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 149 ~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~i-~~~---~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.++.++.++.+...... ..+..+++++.++.+.+.. ..+ ++++++++++.+..++..+|+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 264 LLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 55778999988765321 1477788899999988765 677 9999999999999888888999864
No 64
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.92 E-value=9.8e-24 Score=167.18 Aligned_cols=207 Identities=45% Similarity=0.737 Sum_probs=172.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++++++.+.+.+.+||+++.. ..+.++++|+|+|+|.+|++++++++.+|.+|+++++++++.+.
T Consensus 123 ~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~ 201 (330)
T cd08245 123 VADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKREL 201 (330)
T ss_pred EEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46778899999999999999999999999999977 45899999999998889999999999999999999999888777
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCCcEEEEe
Q 027668 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEKIVGGS 160 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~~~i~~~ 160 (220)
+ +++|++.+++..+.+......+++|++|||++.......++++++++|+++.++..... ..++...++.++.++.++
T Consensus 202 ~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (330)
T cd08245 202 A-RKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGS 280 (330)
T ss_pred H-HHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEe
Confidence 7 67898888776543333222247999999988766788999999999999999865432 222344566788899888
Q ss_pred eccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEE
Q 027668 161 LIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.......++.+++++.++.+.+.++.+++++++++|+.+.+++..+|+++
T Consensus 281 ~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 281 THGGRADLQEALDFAAEGKVKPMIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred ccCCHHHHHHHHHHHHcCCCcceEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 87777889999999999998876689999999999999998888788764
No 65
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.92 E-value=1.1e-23 Score=166.29 Aligned_cols=208 Identities=23% Similarity=0.248 Sum_probs=168.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+++.+.|||..+ ....++++++++|+|+ |++|++++++++.+|++++++++++++.+
T Consensus 103 ~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~-~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~ 181 (324)
T cd08244 103 VADVDSLHPVPDGLDLEAAVAVVHDGRTALGLL-DLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA 181 (324)
T ss_pred EEchHHeEeCCCCCCHHHHhhhcchHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 467789999999999999999999999996544 4556899999999996 99999999999999999999998888877
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +++|++.+++..+.+ .+.+..+ ++|+++||+|.. ....++++++++|+++.+|..... ..++....+.++
T Consensus 182 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 259 (324)
T cd08244 182 LV-RALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRG 259 (324)
T ss_pred HH-HHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCC
Confidence 66 789998888776543 3333333 799999999987 468899999999999999876432 244444556788
Q ss_pred cEEEEeeccC------HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 155 KIVGGSLIGG------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.++.++.... .+.+..+++++.++.+.+.+ +.|+++++++|++.+.++...+|+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 260 VTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8888775533 24577788899999887656 8999999999999999888888998763
No 66
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.92 E-value=7.1e-24 Score=167.35 Aligned_cols=208 Identities=19% Similarity=0.242 Sum_probs=170.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+++.+.+||+++.....+.+|++++|+|+ |.+|++++++++.+|++++++.+++++++
T Consensus 98 ~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 177 (323)
T cd05282 98 VAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE 177 (323)
T ss_pred ecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHH
Confidence 45677899999999999999999999999999888877899999999997 89999999999999999999999988877
Q ss_pred HHHHHcCCcEEecCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~---~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +++|++.++++.+.+. +.+.++ ++|.+|||+|+.. ....+++++++|+++.+|..... ..++...+..++
T Consensus 178 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 255 (323)
T cd05282 178 EL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKD 255 (323)
T ss_pred HH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcC
Confidence 77 7899988888776433 333433 7999999999874 67889999999999999876442 344555545588
Q ss_pred cEEEEeeccCH----------HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.+...... +.+..+++++.++.+.+.. +.|++++++++++.+..+...+|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 256 ITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred ceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 88887755421 3477788899999988765 899999999999999988777888863
No 67
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.92 E-value=1.5e-23 Score=167.01 Aligned_cols=205 Identities=23% Similarity=0.272 Sum_probs=163.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
+++++.++++|+++++++++.+ ..+.+|++++ ....+++|++++|.|+|.+|++++|+|+.+|++ |+++.+++++.+
T Consensus 124 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~ 201 (343)
T cd05285 124 NHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLE 201 (343)
T ss_pred EecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4677889999999999999876 5778888887 455689999999998899999999999999997 888888777765
Q ss_pred HHHHHcCCcEEecCCCHH------HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCcccccc
Q 027668 81 EAVERLGADSFLVSRDQD------EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~------~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~ 152 (220)
.+ +++|++.+++..+.+ .+.+..+ ++|++|||+|....+...+++++++|+++.+|.......++......
T Consensus 202 ~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 280 (343)
T cd05285 202 FA-KELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASL 280 (343)
T ss_pred HH-HHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhh
Confidence 55 778999888776533 3444443 69999999998646888999999999999998655433444445566
Q ss_pred CCcEEEEeeccCHHHHHHHHHHHHhCCcc--eeE-EEEecccHHHHHHHHHcCCc-ceEEEE
Q 027668 153 GEKIVGGSLIGGLKETQEMIDFAAKHNIR--ADI-EVIPADYVNTAMERLAKADV-RYRFVI 210 (220)
Q Consensus 153 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~i-~~~~~~~i~~a~~~~~~~~~-~~k~v~ 210 (220)
++.++.++.... +.++.++++++++.+. +.+ ++|+++++.+|++.+.+++. .+|+++
T Consensus 281 ~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 281 REIDIRGVFRYA-NTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred CCcEEEEeccCh-HHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 788888775443 6788999999999865 333 78999999999999988753 489988
No 68
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.92 E-value=1.9e-23 Score=168.81 Aligned_cols=207 Identities=17% Similarity=0.176 Sum_probs=165.8
Q ss_pred ccCc--ceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccH
Q 027668 3 ADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (220)
Q Consensus 3 ~~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~ 79 (220)
++.+ .++++|+++++++++.++..+.+||+++ ....+.+|++|+|+|+|++|++++++++.+|+ ++++++.++++.
T Consensus 144 v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~ 222 (386)
T cd08283 144 VPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERL 222 (386)
T ss_pred cccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 4555 7899999999999999999999999999 55668999999999999999999999999998 599988888877
Q ss_pred HHHHHHcCCcEEecCCCH----HHHHHhcC--CccEEEEcCCCc---------------------ccHHHHHhccccCCE
Q 027668 80 SEAVERLGADSFLVSRDQ----DEMQAAMG--TMDGIIDTVSAV---------------------HPLMPLIGLLKSQGK 132 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~----~~~~~~~~--~~d~vid~~g~~---------------------~~~~~~~~~l~~~g~ 132 (220)
+.+ ++++...+++..+. +.+.++.+ ++|++|||+|+. ..+..++++++++|+
T Consensus 223 ~~~-~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 301 (386)
T cd08283 223 EMA-RSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGT 301 (386)
T ss_pred HHH-HHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCE
Confidence 666 56633346665543 23334443 799999999753 246788999999999
Q ss_pred EEEecCCCC-CcccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCC-cceE
Q 027668 133 LVLLGAPEK-PLELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKAD-VRYR 207 (220)
Q Consensus 133 iv~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~-~~~k 207 (220)
++.+|.... ...++....+.++.++.++.....+.+..+++++.++.+.+. + +.++++++++|++.+.++. ..+|
T Consensus 302 iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 381 (386)
T cd08283 302 VSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIK 381 (386)
T ss_pred EEEEcCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEE
Confidence 999987654 233444456778899988876667789999999999998863 4 8899999999999998776 3479
Q ss_pred EEEE
Q 027668 208 FVID 211 (220)
Q Consensus 208 ~v~~ 211 (220)
++++
T Consensus 382 ~~~~ 385 (386)
T cd08283 382 VVLK 385 (386)
T ss_pred EEec
Confidence 9985
No 69
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.92 E-value=1.4e-23 Score=167.42 Aligned_cols=208 Identities=20% Similarity=0.267 Sum_probs=164.8
Q ss_pred cccCc--ceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCccc
Q 027668 2 VADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK 78 (220)
Q Consensus 2 ~~~~~--~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~ 78 (220)
+++++ .++++|++++.++++.+++.+.|||+++ ....++++++|+|.|+|.+|++++|+|+.+|. +++++++++++
T Consensus 126 ~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~ 204 (347)
T cd05278 126 RVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPER 204 (347)
T ss_pred EecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 34555 8999999999999999999999999998 45668999999998889999999999999997 78888777666
Q ss_pred HHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCccc-Ccccccc
Q 027668 79 KSEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLEL-PAFPLLT 152 (220)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~-~~~~~~~ 152 (220)
.+. ++++|++.++++.+.+ .+....+ ++|++||++|....+...+++++++|+++.+|........ ....++.
T Consensus 205 ~~~-~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 283 (347)
T cd05278 205 LDL-AKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFG 283 (347)
T ss_pred HHH-HHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhh
Confidence 544 4789998888776543 3334433 7999999998854688899999999999999865433211 1122345
Q ss_pred CCcEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCc-ceEEEEE
Q 027668 153 GEKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADV-RYRFVID 211 (220)
Q Consensus 153 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~-~~k~v~~ 211 (220)
++.++.++.......++.+++++.++.+.+. + ..+++++++++++.+..++. .+|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 284 KNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred ceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 7778777655556778999999999998863 3 78999999999999987776 5788875
No 70
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.92 E-value=2.1e-23 Score=166.18 Aligned_cols=202 Identities=20% Similarity=0.280 Sum_probs=163.1
Q ss_pred cceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHH
Q 027668 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (220)
Q Consensus 6 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~ 84 (220)
..++++|+++++++++.+++.+.|||+++.. ..+.+|++|+|+|+|.+|++++++++.+|+ ++++++.++++.+.+ +
T Consensus 132 ~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~ 209 (344)
T cd08284 132 GTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERA-A 209 (344)
T ss_pred CceEECCCCCCHHHhhhhcCchHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-H
Confidence 4999999999999999999999999999976 457899999999989999999999999997 888887776665554 6
Q ss_pred HcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCCcEEE
Q 027668 85 RLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEKIVG 158 (220)
Q Consensus 85 ~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~~~i~ 158 (220)
++|+.. ++.... ..+.+..+ ++|++|||+|....+..++++++++|+++.+|.... .........+.++.++.
T Consensus 210 ~~g~~~-~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 288 (344)
T cd08284 210 ALGAEP-INFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLR 288 (344)
T ss_pred HhCCeE-EecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEE
Confidence 799753 444432 33444443 799999999976678899999999999999997652 23344445566788887
Q ss_pred EeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 159 GSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
+........++.+++++.++.+.+. + +++++++++++++.+.+++. +|+|+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 289 FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred EecCCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 6655566789999999999998752 3 88999999999999988777 899875
No 71
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.92 E-value=1.2e-23 Score=166.72 Aligned_cols=213 Identities=21% Similarity=0.284 Sum_probs=172.3
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|++++..+++++.+.+.+||+++.....+++|++++|+|+ |.+|++++++++.+|++++++.+++++++
T Consensus 100 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 179 (334)
T PTZ00354 100 VAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD 179 (334)
T ss_pred EecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999988777899999999996 99999999999999999888888888777
Q ss_pred HHHHHcCCcEEecCCCHH----HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-Ccc-cCcccccc
Q 027668 81 EAVERLGADSFLVSRDQD----EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLE-LPAFPLLT 152 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~----~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~-~~~~~~~~ 152 (220)
.+ +++|.+.+++....+ .+.+..+ ++|++|||+|.. .+..++++++++|+++.+|...+ ... ++...+..
T Consensus 180 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~ 257 (334)
T PTZ00354 180 FC-KKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLR 257 (334)
T ss_pred HH-HHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHh
Confidence 77 679998888776533 2333332 799999999875 68889999999999999986543 222 55555566
Q ss_pred CCcEEEEeeccCH----------HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEeCCcc
Q 027668 153 GEKIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVANTM 216 (220)
Q Consensus 153 ~~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~~~~~ 216 (220)
+..++.++..... ..++.++++++++.+.+.+ +.+++++++++++.+..++..+|+++++.+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~~ 332 (334)
T PTZ00354 258 KRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEPL 332 (334)
T ss_pred hCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence 7778887654331 2246778889999888755 89999999999999988877789999886653
No 72
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.92 E-value=1.4e-23 Score=165.62 Aligned_cols=200 Identities=20% Similarity=0.234 Sum_probs=160.4
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
+++.+.++++|++++.++++.+ ....+++.+++ ...+++|++|+|+|+|.+|++++|+++.+|+++++++.++++++.
T Consensus 117 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~~-~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~ 194 (319)
T cd08242 117 TLPLENLHVVPDLVPDEQAVFA-EPLAAALEILE-QVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLAL 194 (319)
T ss_pred EechHHeEECcCCCCHHHhhhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 5677889999999999888754 44456676664 455899999999999999999999999999999999988888776
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEee
Q 027668 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSL 161 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~ 161 (220)
+ +++|++.+++..+. ...+++|++|||+|....+..++++++++|+++..+.......++...+..++.++.++.
T Consensus 195 ~-~~~g~~~~~~~~~~----~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~ 269 (319)
T cd08242 195 A-RRLGVETVLPDEAE----SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSR 269 (319)
T ss_pred H-HHcCCcEEeCcccc----ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEe
Confidence 6 56999887766432 111379999999988656888999999999999877655555556666677888998876
Q ss_pred ccCHHHHHHHHHHHHhCCcc--eeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 162 IGGLKETQEMIDFAAKHNIR--ADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~--~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
... +++++++++++.++ +.+ +.|+++++++||+.+..+. .+|+++.+
T Consensus 270 ~~~---~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 270 CGP---FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred ccc---HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 543 77889999999984 445 8999999999999998666 47998863
No 73
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.92 E-value=1.6e-23 Score=166.85 Aligned_cols=205 Identities=21% Similarity=0.293 Sum_probs=167.4
Q ss_pred cccCcc-----eeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCC
Q 027668 2 VADEHF-----VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTS 75 (220)
Q Consensus 2 ~~~~~~-----~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~ 75 (220)
.++.+. ++++|+++++.+++.+ +.+.+||+++... .+++|++|+|+|+|.+|++++++++..|.+ +++++.+
T Consensus 122 ~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s 199 (343)
T cd08235 122 RVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLN 199 (343)
T ss_pred EecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 345555 9999999999999766 7888999999766 689999999998899999999999999998 8888888
Q ss_pred cccHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccCcc
Q 027668 76 PSKKSEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAF 148 (220)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~--~~~~~~ 148 (220)
+++.+.+ +++|.+.++++.+.+ .+.+..+ ++|++|||++....+...+++++++|+++.+|..... ..++..
T Consensus 200 ~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 278 (343)
T cd08235 200 EFRLEFA-KKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPN 278 (343)
T ss_pred HHHHHHH-HHhCCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHH
Confidence 8877766 678998888877643 3333433 6999999999765678899999999999999865432 334444
Q ss_pred ccccCCcEEEEeeccCHHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 149 PLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 149 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
....++.++.++.......++.++++++++.+.+ .+ .++++++++++++.+.+++ .+|+|+
T Consensus 279 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi 342 (343)
T cd08235 279 LIHYREITITGSYAASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVI 342 (343)
T ss_pred HHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence 5566888888887777788999999999999863 23 7899999999999999888 888886
No 74
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.92 E-value=2e-23 Score=165.97 Aligned_cols=206 Identities=21% Similarity=0.269 Sum_probs=165.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
+++.+.++++|++++.++++. ...+.++|+++...... ++++|||.|+|.+|++++|+++.+|. +++++++++++.+
T Consensus 127 ~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~ 204 (339)
T cd08232 127 VVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLA 204 (339)
T ss_pred EechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 567789999999999998875 57778899999887765 99999998889999999999999999 7888888777665
Q ss_pred HHHHHcCCcEEecCCCHHHHHHhc---CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEE
Q 027668 81 EAVERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIV 157 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~---~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i 157 (220)
+.+++|.+.++++.+.+ ..+.. +++|++|||+|....++..+++|+++|+++.+|........+...++.++.++
T Consensus 205 -~~~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 282 (339)
T cd08232 205 -VARAMGADETVNLARDP-LAAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDL 282 (339)
T ss_pred -HHHHcCCCEEEcCCchh-hhhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEE
Confidence 55788988888776543 22222 26999999999755688999999999999999865533333444445678888
Q ss_pred EEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 158 GGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.+... ....++.++++++++.+++. + ++|++++++++++.+.++...+|+|+++
T Consensus 283 ~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 283 RGSFR-FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred EEEec-CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 77754 34568889999999988642 4 7899999999999998887788999864
No 75
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.92 E-value=2.3e-23 Score=164.96 Aligned_cols=201 Identities=29% Similarity=0.379 Sum_probs=166.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++.+++.+.+.+.+||+++ ...+++++++++|+|+|++|++++++++..|.+++++++++++++.
T Consensus 128 ~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~ 206 (329)
T cd08298 128 VADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQEL 206 (329)
T ss_pred EecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHH
Confidence 467788999999999999999999999999999 5667899999999999999999999999999999999999887766
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCCcEEEEe
Q 027668 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEKIVGGS 160 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~~~i~~~ 160 (220)
+ +++|++.+++.... ..+++|.++++.+....+..++++++++|+++.+|..... ..++... +.++..+.++
T Consensus 207 ~-~~~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~ 279 (329)
T cd08298 207 A-RELGADWAGDSDDL-----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSV 279 (329)
T ss_pred H-HHhCCcEEeccCcc-----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEe
Confidence 6 78999877765432 1137999999877666788999999999999998854321 1222222 4567778887
Q ss_pred eccCHHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEE
Q 027668 161 LIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.....+.++.++++++++.+.+.+++|+++++++|++.+.+++..+|+++
T Consensus 280 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 280 ANLTRQDGEEFLKLAAEIPIKPEVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred cCCCHHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 77777889999999999998876689999999999999998888888763
No 76
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.92 E-value=2.6e-23 Score=162.95 Aligned_cols=204 Identities=23% Similarity=0.334 Sum_probs=166.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.+||+++...... +|++++|+|+ |++|++++++++.+|++++.+++++++.+
T Consensus 93 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 171 (305)
T cd08270 93 AVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAE 171 (305)
T ss_pred EEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 467789999999999999999999999999999887754 6999999998 99999999999999999999998888777
Q ss_pred HHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCcccccc--CCcEE
Q 027668 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLT--GEKIV 157 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~--~~~~i 157 (220)
.+ +++|++.++...+ + . ..+++|+++||+|.. ....++++++.+|+++.+|..... ..++...+.. ++.++
T Consensus 172 ~~-~~~g~~~~~~~~~-~-~--~~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 245 (305)
T cd08270 172 GL-RELGAAEVVVGGS-E-L--SGAPVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRL 245 (305)
T ss_pred HH-HHcCCcEEEeccc-c-c--cCCCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceE
Confidence 66 5699865543322 1 1 113799999999987 588999999999999999875422 3344444443 68888
Q ss_pred EEeeccC----HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 158 GGSLIGG----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 158 ~~~~~~~----~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.++.... .+.+..+++++.++.+++.+ +++++++++++++.+.++...+|+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 246 YTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred EEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8876653 45688889999999998766 8999999999999999888778998864
No 77
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.92 E-value=4e-23 Score=164.99 Aligned_cols=204 Identities=18% Similarity=0.214 Sum_probs=160.4
Q ss_pred ccCc-ceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 3 ADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 3 ~~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
++++ .++++|++++++.++.+ ..+.++|+++ ....+++|++|+|.|+|.+|++++++++.+|++ ++++++++++.
T Consensus 136 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~- 212 (350)
T cd08256 136 FPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERL- 212 (350)
T ss_pred cccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHH-
Confidence 4555 57899999999999888 8889999998 455689999999977899999999999999985 56666666655
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCcccc-ccCC
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPL-LTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~-~~~~ 154 (220)
.+.+++|++.+++..+. +.+.+..+ ++|++||++|....+..++++++++|+++.+|......+++...+ ..++
T Consensus 213 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 292 (350)
T cd08256 213 ALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKE 292 (350)
T ss_pred HHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccc
Confidence 45578999888877643 34444443 799999999975568889999999999999987554333333322 3567
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.++.++.... ..+.+++++++++.+++. + +.|+++++++|++.+.+++..+|+++
T Consensus 293 ~~i~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 293 LDVLGSHLGP-YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred cEEEEeccCc-hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 7888776543 468889999999999873 4 89999999999999998887788874
No 78
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.92 E-value=4.9e-23 Score=162.69 Aligned_cols=209 Identities=22% Similarity=0.247 Sum_probs=161.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCC--C-CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD--K-PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~--~-~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~ 77 (220)
.++++.++++|+++++++++++++.+.++|+++...... . .+++|+|+|+ |++|++++++++.+|++|++++++++
T Consensus 103 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (325)
T cd05280 103 RVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE 182 (325)
T ss_pred EEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 567889999999999999999999999999998765432 4 3579999997 99999999999999999999999988
Q ss_pred cHHHHHHHcCCcEEecCCCHH--HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccC
Q 027668 78 KKSEAVERLGADSFLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (220)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~ 153 (220)
+++.+ +++|++.+++..+.+ ..+... +++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.+
T Consensus 183 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 260 (325)
T cd05280 183 QADYL-KSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILR 260 (325)
T ss_pred HHHHH-HhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheee
Confidence 87777 789998888766532 222222 3799999999986 68999999999999999987543 234444455568
Q ss_pred CcEEEEeeccC--H----HHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 154 EKIVGGSLIGG--L----KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 154 ~~~i~~~~~~~--~----~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
+.++.+..... . ..++.+.+++..+...+...+|++++++++++.+.+++..+|+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 261 GVSLLGIDSVNCPMELRKQVWQKLATEWKPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eeEEEEEEeecCchhHHHHHHHHHHHHHhcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 88888765432 1 22334444455553333348999999999999999988889998863
No 79
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.92 E-value=3.7e-23 Score=162.93 Aligned_cols=207 Identities=22% Similarity=0.254 Sum_probs=165.3
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++.+.+.+.+||+++.....+++|++|+|+|+ |++|++++++++.+|++|++++.++++.+
T Consensus 102 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 181 (320)
T cd08243 102 LVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA 181 (320)
T ss_pred EcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999988877899999999997 99999999999999999999999988776
Q ss_pred HHHHHcCCcEEecCCC--HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcc---cCcccc--ccC
Q 027668 81 EAVERLGADSFLVSRD--QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLE---LPAFPL--LTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~---~~~~~~--~~~ 153 (220)
.+ +++|++.+++... .+.+.+..+++|.++||+|+. .+..++++++++|+++.+|....... ...... ..+
T Consensus 182 ~~-~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~ 259 (320)
T cd08243 182 LL-KELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGV 259 (320)
T ss_pred HH-HhcCCcEEEecCccHHHHHHHhCCCceEEEECCChH-HHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhcc
Confidence 66 7899987764432 233444423899999999985 68899999999999999987532211 111111 246
Q ss_pred CcEEEEeeccC--HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 154 EKIVGGSLIGG--LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 154 ~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
+.++.++.... ...++.++++++++.+.+.. +.++++++++|++.+.+++..+|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 260 NLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred ceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 67776665432 24578889999999888654 89999999999999988877778875
No 80
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.92 E-value=4.3e-23 Score=165.52 Aligned_cols=206 Identities=23% Similarity=0.359 Sum_probs=167.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++.+++.+.+||+++.....+.++++|+|+|+|.+|++++++++..|++ |++++.++++.+
T Consensus 142 ~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~ 221 (363)
T cd08279 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLE 221 (363)
T ss_pred EeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 5678899999999999999999999999999987777789999999998899999999999999996 888888877766
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccCccccccC
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~~~~~~~~ 153 (220)
.+ +++|++.+++.... ..+.+.. +++|+++|+++....+...+++++++|+++.+|.... ...++...+..+
T Consensus 222 ~~-~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 300 (363)
T cd08279 222 LA-RRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLS 300 (363)
T ss_pred HH-HHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhc
Confidence 55 78999888877653 3344444 3799999999976568899999999999999986542 345555555556
Q ss_pred CcEEEEeec---cCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEE
Q 027668 154 EKIVGGSLI---GGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRF 208 (220)
Q Consensus 154 ~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~ 208 (220)
+..+.++.. .....+++++++++++.+.+. + ++++++++++|++.+.+++..+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 361 (363)
T cd08279 301 EKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGV 361 (363)
T ss_pred CcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEE
Confidence 777777643 345778999999999998863 4 789999999999999887765333
No 81
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.92 E-value=6e-23 Score=165.11 Aligned_cols=207 Identities=22% Similarity=0.344 Sum_probs=163.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
+++++.++++|+++++++++.+.+.+.+||+++.....+++|++|+|+|+|++|++++++++.+|+ +|+++++++++++
T Consensus 150 ~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~ 229 (373)
T cd08299 150 VVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFA 229 (373)
T ss_pred EecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 578889999999999999999999999999987666678999999999999999999999999999 8999999888877
Q ss_pred HHHHHcCCcEEecCCCH-----HHHHHhc-CCccEEEEcCCCcccHHHHHhcc-ccCCEEEEecCCCCC--cccCccccc
Q 027668 81 EAVERLGADSFLVSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l-~~~g~iv~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +++|++.+++..+. +.+.+.. +++|.+|||+|.+..+..++..+ +++|+++.+|..... .+++... +
T Consensus 230 ~a-~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~-~ 307 (373)
T cd08299 230 KA-KELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPML-L 307 (373)
T ss_pred HH-HHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHH-H
Confidence 77 78999888876542 2233333 38999999999766677766655 579999999976532 3333322 3
Q ss_pred cCCcEEEEeecc---CHHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 152 TGEKIVGGSLIG---GLKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.++.++... ...++.++++.+.++.+++ .+ +.|+++++++|++.+..++. .|+++.
T Consensus 308 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~ 372 (373)
T cd08299 308 LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLT 372 (373)
T ss_pred hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEe
Confidence 467788887653 3356777888887776553 34 89999999999999887664 477775
No 82
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.92 E-value=3.2e-23 Score=164.59 Aligned_cols=206 Identities=17% Similarity=0.252 Sum_probs=161.3
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCC-----CCEEEEEcC-chHHHHHHHHHHHC-CCeEEEEeC
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVIST 74 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~G~-g~~G~~~~~~~~~~-g~~v~~~~~ 74 (220)
+++++.++++|+++++++++.+++.+.|||+++.....+.+ |++|||+|+ |++|++++|+++.+ |++|+++++
T Consensus 103 ~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~ 182 (336)
T TIGR02817 103 LVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATAS 182 (336)
T ss_pred EEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcC
Confidence 56778899999999999999999999999999877666776 999999996 99999999999998 999999999
Q ss_pred CcccHHHHHHHcCCcEEecCCC--HHHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccc
Q 027668 75 SPSKKSEAVERLGADSFLVSRD--QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~ 151 (220)
++++.+.+ +++|++.++++.. ...+++..+ ++|+++|+++........+++++++|+++.++.. ..++..++.
T Consensus 183 ~~~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~ 258 (336)
T TIGR02817 183 RPESQEWV-LELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFK 258 (336)
T ss_pred cHHHHHHH-HHcCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhh
Confidence 88887777 7899988887543 233444433 7999999987655688999999999999988532 233333344
Q ss_pred cCCcEEEEeecc-----C-------HHHHHHHHHHHHhCCcceeE-EEEe---cccHHHHHHHHHcCCcceEEEEE
Q 027668 152 TGEKIVGGSLIG-----G-------LKETQEMIDFAAKHNIRADI-EVIP---ADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~i~~~~~~-----~-------~~~~~~~~~~~~~~~~~~~i-~~~~---~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.++.+.... . ...++.+++++.++.+++.+ +.++ ++++++|++.+.+++..+|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 259 RKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred hcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 455555542221 0 13478889999999988754 5554 68999999999988888898875
No 83
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.92 E-value=6.7e-23 Score=161.90 Aligned_cols=208 Identities=22% Similarity=0.253 Sum_probs=163.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccC--CCCCC-EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL--DKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~--~~~~~-~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~ 77 (220)
.+|.+.++++|+++++++++.+++.+.++++++..... +.+++ +++|+|+ |++|++++++|+.+|+++++++.+++
T Consensus 102 ~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~ 181 (323)
T TIGR02823 102 RVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAE 181 (323)
T ss_pred EEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 46778999999999999999999999999887754432 68898 9999997 99999999999999999998888888
Q ss_pred cHHHHHHHcCCcEEecCCCHH-HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCC
Q 027668 78 KKSEAVERLGADSFLVSRDQD-EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (220)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~-~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~ 154 (220)
+++.+ +++|++.+++..+.+ .+..... ++|.++||+|.. .+..++++++++|+++.+|.... ..+++...++.++
T Consensus 182 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 259 (323)
T TIGR02823 182 EEDYL-KELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRG 259 (323)
T ss_pred HHHHH-HhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcc
Confidence 77666 789998888766533 2333333 699999999986 58899999999999999997643 2333334455788
Q ss_pred cEEEEeecc--CH----HHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIG--GL----KETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~--~~----~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.+.... .. ..+..+.+++.++.+.+.++.++++++++||+.+.+++..+|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 260 VSLLGIDSVYCPMALREAAWQRLATDLKPRNLESITREITLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred eEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCceeeecHHHHHHHHHHHhCCCccceEEEe
Confidence 888875432 11 2245566667777776545899999999999999988888898875
No 84
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.92 E-value=5.2e-23 Score=152.35 Aligned_cols=210 Identities=20% Similarity=0.254 Sum_probs=171.2
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
+.+++.++++++.++++.||++....+|||.+|...-.+.+||+|+-.|+ +.+|++++|+|+++|.+-+-+.|+....+
T Consensus 120 v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ie 199 (354)
T KOG0025|consen 120 VFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIE 199 (354)
T ss_pred eecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHH
Confidence 46788999999999999999999999999999998888999999999998 99999999999999999998888877655
Q ss_pred HHH---HHcCCcEEecCCCH---HHHHHh--cCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccc
Q 027668 81 EAV---ERLGADSFLVSRDQ---DEMQAA--MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLL 151 (220)
Q Consensus 81 ~~~---~~~g~~~v~~~~~~---~~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~ 151 (220)
++. +.+|+++|+...+. +..+.. ..++.+.|||+|+.. .....+.|..||.++.+|..+. +.+++...++
T Consensus 200 el~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lI 278 (354)
T KOG0025|consen 200 ELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLI 278 (354)
T ss_pred HHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchhe
Confidence 553 46799999865432 122121 128999999999985 6678889999999999999875 5788899999
Q ss_pred cCCcEEEEeeccC-------H----HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcc-eEEEEEe
Q 027668 152 TGEKIVGGSLIGG-------L----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVR-YRFVIDV 212 (220)
Q Consensus 152 ~~~~~i~~~~~~~-------~----~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~-~k~v~~~ 212 (220)
+|++.++|++... . +.+.++.+++..|.++.+. ...++++...|++........ +|-++.+
T Consensus 279 FKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 279 FKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred eccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 9999999998833 2 3367788899999999876 788999988888866544332 4665554
No 85
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.92 E-value=8.1e-23 Score=162.06 Aligned_cols=208 Identities=30% Similarity=0.387 Sum_probs=174.8
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
.++.+.++++|+++++.+++.+.+.+.+||+++.....+++|++++|+|+|++|++++++++..|++|++++.++++++.
T Consensus 120 ~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~ 199 (336)
T cd08276 120 VLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLER 199 (336)
T ss_pred EecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 35678899999999999999999999999999988777899999999988999999999999999999999998888777
Q ss_pred HHHHcCCcEEecCCC-H---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCC
Q 027668 82 AVERLGADSFLVSRD-Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~-~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~ 154 (220)
+ +++|.+.+++... . +.+....+ ++|.+||+++.. .+..++++++++|+++.+|..... ...+...++.++
T Consensus 200 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 277 (336)
T cd08276 200 A-KALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKG 277 (336)
T ss_pred H-HHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcc
Confidence 6 5689888887654 2 33444443 899999999865 588899999999999999875432 234455567889
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.++.......++.+++++.++.+.+.. +.+++++++++++.+.+++..+|++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 278 ATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred eEEEEEecCcHHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 999998877778899999999998887655 899999999999999888777888875
No 86
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.91 E-value=3.2e-23 Score=163.88 Aligned_cols=209 Identities=20% Similarity=0.273 Sum_probs=159.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccC---CCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~ 77 (220)
.++++.++++|+++++++++.+++.+.|||+++..... ..++++|+|+|+ |++|++++|+|+.+|++|++++++++
T Consensus 103 ~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (326)
T cd08289 103 RVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKAD 182 (326)
T ss_pred EEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHH
Confidence 46778999999999999999999999999988754332 345789999997 99999999999999999999999988
Q ss_pred cHHHHHHHcCCcEEecCCCH--HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccC
Q 027668 78 KKSEAVERLGADSFLVSRDQ--DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (220)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~--~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~ 153 (220)
+++.+ +++|++.+++..+. +.+....+ ++|++|||+|.. .+...+++++++|+++.+|.... ..+++...++.+
T Consensus 183 ~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~ 260 (326)
T cd08289 183 AADYL-KKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILR 260 (326)
T ss_pred HHHHH-HHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhc
Confidence 87777 78999888876653 23333333 799999999985 68899999999999999997643 234445556678
Q ss_pred CcEEEEeeccC--HHHHHHHHHHHHh----CCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 154 EKIVGGSLIGG--LKETQEMIDFAAK----HNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 154 ~~~i~~~~~~~--~~~~~~~~~~~~~----~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
+.++.+..... ......+++.+.+ +.+...+ ++++++++++||+.+.+++..+|+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 261 GVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 88888874321 1223333333332 2222234 8999999999999999888888998763
No 87
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.91 E-value=9e-23 Score=161.60 Aligned_cols=206 Identities=26% Similarity=0.367 Sum_probs=168.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
+++.+.++++|+++++++++.+++.+.+||+++.. ..+.++++++|+|+ |++|++++++++..|.+++++++++++.+
T Consensus 123 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~ 201 (332)
T cd08259 123 KVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK 201 (332)
T ss_pred EechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 46778999999999999999999999999999987 66899999999997 99999999999999999999998877766
Q ss_pred HHHHHcCCcEEecCCC-HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc-ccCccccccCCcEEE
Q 027668 81 EAVERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTGEKIVG 158 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~-~~~~~~~~~~~~~i~ 158 (220)
.+ +++|.+.+++..+ .+.+... .++|++|+++|... ...++++++++|+++.+|...... .++......++.++.
T Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 278 (332)
T cd08259 202 IL-KELGADYVIDGSKFSEDVKKL-GGADVVIELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRII 278 (332)
T ss_pred HH-HHcCCcEEEecHHHHHHHHhc-cCCCEEEECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEE
Confidence 66 6788877775543 1222222 27999999999874 788999999999999998764322 223333335677787
Q ss_pred EeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 159 GSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
++.......++++++++.++.+.+.+ ++|+++++++|++.+.+++..+|++++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 279 GSISATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred EecCCCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 77666778899999999999988766 899999999999999988877888863
No 88
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.91 E-value=5.2e-23 Score=163.89 Aligned_cols=206 Identities=22% Similarity=0.335 Sum_probs=163.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
.+|++.++++|+++++++++.+ ..+.+||+++. ...++++++|+|+|+|.+|++++|+|+.+|++ ++++++++++.+
T Consensus 121 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~ 198 (343)
T cd08236 121 SVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLA 198 (343)
T ss_pred EechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 5678899999999999999877 67789999987 45589999999998899999999999999997 988888887766
Q ss_pred HHHHHcCCcEEecCCCH--HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccC---ccccccC
Q 027668 81 EAVERLGADSFLVSRDQ--DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP---AFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~---~~~~~~~ 153 (220)
.+ +++|++.+++..+. +.+.+..+ ++|++|||+|....+..++++++++|+++.+|.......+. ...++.+
T Consensus 199 ~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 277 (343)
T cd08236 199 VA-RELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRK 277 (343)
T ss_pred HH-HHcCCCEEecCccccHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhc
Confidence 55 78898888877653 33333333 69999999987656888999999999999998765432222 2233467
Q ss_pred CcEEEEeeccC-----HHHHHHHHHHHHhCCcc--eeE-EEEecccHHHHHHHHHc-CCcceEEEE
Q 027668 154 EKIVGGSLIGG-----LKETQEMIDFAAKHNIR--ADI-EVIPADYVNTAMERLAK-ADVRYRFVI 210 (220)
Q Consensus 154 ~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~--~~i-~~~~~~~i~~a~~~~~~-~~~~~k~v~ 210 (220)
+.++.++.... .+.++.+.+++.++.+. +.+ ..+++++++++++.+.+ ....+|+|+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 278 ELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred CcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 88888876543 56788899999999876 334 89999999999999998 555678764
No 89
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.91 E-value=1.2e-22 Score=163.62 Aligned_cols=201 Identities=21% Similarity=0.193 Sum_probs=160.0
Q ss_pred ceeeCCCCCCcc---cccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHH
Q 027668 7 FVVRIPEGAPLD---ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (220)
Q Consensus 7 ~~~~~p~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~ 82 (220)
.++++|++++++ +++++...+.++|+++ ....+.+|++|+|.|+|++|++++|++++.|+ +++++++++++.+.+
T Consensus 139 ~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~ 217 (375)
T cd08282 139 NLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLA 217 (375)
T ss_pred cEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 899999999998 5678888999999999 45568999999999889999999999999998 788887877776555
Q ss_pred HHHcCCcEEecCCCH---HHHHHhcC-CccEEEEcCCCcc-----------cHHHHHhccccCCEEEEecCCCCC-----
Q 027668 83 VERLGADSFLVSRDQ---DEMQAAMG-TMDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLLGAPEKP----- 142 (220)
Q Consensus 83 ~~~~g~~~v~~~~~~---~~~~~~~~-~~d~vid~~g~~~-----------~~~~~~~~l~~~g~iv~~g~~~~~----- 142 (220)
+++|+. .++..+. +.+.+.++ ++|++|||+|... .+..++++++++|+++.+|.....
T Consensus 218 -~~~g~~-~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~ 295 (375)
T cd08282 218 -ESIGAI-PIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAG 295 (375)
T ss_pred -HHcCCe-EeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccc
Confidence 689984 4555543 23334443 7999999999762 378899999999999988864311
Q ss_pred --------cccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 143 --------LELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 143 --------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
..++...++.++..+.++.......+..++++++++.+.+. + +++++++++++++.+.+++ .+|+|+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 296 DAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred cccccCccccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 22344445667777777766566778899999999999863 4 9999999999999999888 7899875
No 90
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.91 E-value=5.1e-23 Score=162.95 Aligned_cols=208 Identities=24% Similarity=0.257 Sum_probs=164.6
Q ss_pred cccC-cceeeCCCCCC--cccccc-cchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCc
Q 027668 2 VADE-HFVVRIPEGAP--LDATAP-LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (220)
Q Consensus 2 ~~~~-~~~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~ 76 (220)
.++. +.++++|++++ +..++. +.+.+.+||+++.....+.++++|+|+|+ |++|++++++++..|++++++++++
T Consensus 101 ~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~ 180 (329)
T cd05288 101 VVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSD 180 (329)
T ss_pred EecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 4567 88999999995 445555 88999999999987777899999999995 9999999999999999999999888
Q ss_pred ccHHHHHHHcCCcEEecCCCHHH---HHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcc------cC
Q 027668 77 SKKSEAVERLGADSFLVSRDQDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLE------LP 146 (220)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~------~~ 146 (220)
++.+.+.+.+|++.+++..+.+. +.+.. +++|++|||+|.. .+..++++++++|+++.+|....... ++
T Consensus 181 ~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 259 (329)
T cd05288 181 EKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKN 259 (329)
T ss_pred HHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccCccccccccccc
Confidence 87776644499988888766432 33333 3899999999986 68899999999999999986543211 22
Q ss_pred ccccccCCcEEEEeeccCH-----HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 147 AFPLLTGEKIVGGSLIGGL-----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 147 ~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
....+.++.++.++..... +.+.++++++.++.+++.. ..+++++++++++.+.+++..+|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 260 LGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 3445678888888765432 4577888999999988654 77899999999999988776677763
No 91
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.91 E-value=1e-22 Score=161.03 Aligned_cols=198 Identities=24% Similarity=0.326 Sum_probs=161.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++++.++++|+++++++++.+++.+.+||+++.. ..+++|++++|+|+ |++|++++++|+.+|++++++++ .+
T Consensus 123 ~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~ 197 (325)
T cd08264 123 VVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KD 197 (325)
T ss_pred EcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HH
Confidence 46778899999999999999999999999999976 56899999999997 99999999999999999888763 24
Q ss_pred HHHHHcCCcEEecCCC-HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCCcEEE
Q 027668 81 EAVERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEKIVG 158 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~~~i~ 158 (220)
.+ +++|++.+++..+ .+.++...+++|+++|++|.. .+..++++++++|+++.+|.... ...++...++.++.++.
T Consensus 198 ~~-~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (325)
T cd08264 198 WL-KEFGADEVVDYDEVEEKVKEITKMADVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISII 275 (325)
T ss_pred HH-HHhCCCeeecchHHHHHHHHHhCCCCEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEE
Confidence 44 6799988887654 233444447899999999985 68899999999999999987532 34555566677888999
Q ss_pred EeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEE
Q 027668 159 GSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRF 208 (220)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~ 208 (220)
++..+.++.++++++++.... ..+ +.|+++++++|++.+..++..+|+
T Consensus 276 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 276 GSTGGTRKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred EccCCCHHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 988888888999999996443 334 899999999999999877765554
No 92
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.91 E-value=2.2e-22 Score=160.45 Aligned_cols=203 Identities=19% Similarity=0.275 Sum_probs=160.4
Q ss_pred cceeeCCCCCCccccc-----ccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccH
Q 027668 6 HFVVRIPEGAPLDATA-----PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (220)
Q Consensus 6 ~~~~~~p~~~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~ 79 (220)
+.++++|++++++.+. ++...+.+|++++.. ..+++|++++|.|+|++|++++|+++.+|++ ++++++++++.
T Consensus 128 ~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~ 206 (345)
T cd08287 128 GTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQ 206 (345)
T ss_pred CceEECCCCCChhhhhhhhhHhhhcHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 3899999999882221 233678889998864 4589999999998999999999999999995 67776666555
Q ss_pred HHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCC
Q 027668 80 SEAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~ 154 (220)
++.+++|++.++++.+.+ .+.+..+ ++|.++||+|....+..++++++++|+++.+|.......++....+.++
T Consensus 207 -~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 285 (345)
T cd08287 207 -ALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRN 285 (345)
T ss_pred -HHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcc
Confidence 444789999999887643 3444443 7999999998766789999999999999999876544445554556789
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.+......+.+++++++++++.+++. + +.+++++++++++.+...+. .|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 286 VGLAGGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred eEEEEecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence 99988776667789999999999998862 3 88999999999999887664 499885
No 93
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.91 E-value=1.5e-22 Score=160.12 Aligned_cols=207 Identities=21% Similarity=0.259 Sum_probs=161.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+.+.+.++|.++.....+.+|++++|+|+ |.+|++++++++.+|+++++++.++++++
T Consensus 100 ~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~ 179 (327)
T PRK10754 100 NVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ 179 (327)
T ss_pred EcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999887777899999999975 99999999999999999999998888876
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +++|++.+++..+. +.+.+.++ ++|++|||+|.. .....+++++++|+++.+|..... ..++...+..++
T Consensus 180 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 257 (327)
T PRK10754 180 RA-KKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKG 257 (327)
T ss_pred HH-HHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccC
Confidence 66 78998888876653 33444443 799999999985 578899999999999999875432 122222222222
Q ss_pred c------EEEEeeccCH----HHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 K------IVGGSLIGGL----KETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~------~i~~~~~~~~----~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
. .+.+.. ... ..+..+++++.++.+++. . +.|++++++++++.+.+++..+|+|+.
T Consensus 258 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 258 SLYVTRPSLQGYI-TTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ceEEecceeeccc-CCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 1 122221 122 224568889999999864 3 899999999999999988888999985
No 94
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.90 E-value=3.4e-22 Score=161.42 Aligned_cols=206 Identities=20% Similarity=0.261 Sum_probs=159.6
Q ss_pred cccCcceeeCCCCC-------CcccccccchhhhhhhhhhHhc-cCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEE
Q 027668 2 VADEHFVVRIPEGA-------PLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVI 72 (220)
Q Consensus 2 ~~~~~~~~~~p~~~-------~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~ 72 (220)
.++++.++++|+++ +.. ++++...+.+||+++... ..+++|++|+|+|+|++|++++++++.+|+ +|+++
T Consensus 156 ~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~ 234 (384)
T cd08265 156 AVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAF 234 (384)
T ss_pred EechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 46778899999864 444 556777889999998655 568999999999889999999999999999 78888
Q ss_pred eCCcccHHHHHHHcCCcEEecCCCH------HHHHHhcC--CccEEEEcCCCc-ccHHHHHhccccCCEEEEecCCCCCc
Q 027668 73 STSPSKKSEAVERLGADSFLVSRDQ------DEMQAAMG--TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPEKPL 143 (220)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~v~~~~~~------~~~~~~~~--~~d~vid~~g~~-~~~~~~~~~l~~~g~iv~~g~~~~~~ 143 (220)
+.++++. ++++++|++.+++..+. +.+.+.++ ++|+++||.|.. ..+..++++++++|+++.+|......
T Consensus 235 ~~~~~~~-~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 313 (384)
T cd08265 235 EISEERR-NLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTV 313 (384)
T ss_pred cCCHHHH-HHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCC
Confidence 8887755 55578999888876532 33444443 799999999864 35678899999999999998765444
Q ss_pred ccCccccccCCcEEEEeecc-CHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 144 ELPAFPLLTGEKIVGGSLIG-GLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 144 ~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
+++...+..+..++.++... ....+.+++++++++.+.+. + ++|+++++++|++.+.++ ..+|+++
T Consensus 314 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 314 PLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred cccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 44445556677788877542 33468899999999998863 3 889999999999997655 4578775
No 95
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.90 E-value=3.9e-22 Score=156.72 Aligned_cols=204 Identities=21% Similarity=0.287 Sum_probs=160.0
Q ss_pred cccCcceeeCCCCCCcccccccc-hhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLL-CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~-~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~ 79 (220)
.++++.++++|+++ ..+ ++. ..+.++++++. ...++++++++|+|+|.+|++++++|+.+|++ ++++.+++++.
T Consensus 92 ~v~~~~~~~lP~~~--~~~-~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~ 167 (312)
T cd08269 92 LADADHAVPLPSLL--DGQ-AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARL 167 (312)
T ss_pred EEchhheEECCCch--hhh-HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence 56788999999998 222 343 77788898887 56689999999998899999999999999998 99888887776
Q ss_pred HHHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCC-CCcccCccccccC
Q 027668 80 SEAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLLTG 153 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~-~~~~~~~~~~~~~ 153 (220)
+ +.+++|++.+++.... +.+.+..+ ++|++|||+|........+++++++|+++.+|... ....++...+..+
T Consensus 168 ~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~ 246 (312)
T cd08269 168 A-LARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWK 246 (312)
T ss_pred H-HHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhc
Confidence 6 4478999888875543 33444443 79999999987656888999999999999998654 2234444455677
Q ss_pred CcEEEEeeccC----HHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCCc-ceEEEE
Q 027668 154 EKIVGGSLIGG----LKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADV-RYRFVI 210 (220)
Q Consensus 154 ~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~~-~~k~v~ 210 (220)
+.++.++.... .+.++.++++++++.+.+ .+ +.+++++++++++.+.+++. .+|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 247 GIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred CCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 88877765433 357889999999999886 24 78999999999999998865 478876
No 96
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.90 E-value=5.8e-22 Score=157.34 Aligned_cols=208 Identities=23% Similarity=0.286 Sum_probs=171.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++++.+.++++++.....+.++++++|+|+ +.+|++++++++..|++++++++++++.+
T Consensus 126 ~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~ 205 (342)
T cd08266 126 AVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE 205 (342)
T ss_pred EechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999877777899999999997 79999999999999999999998888776
Q ss_pred HHHHHcCCcEEecCCCHHHH---HHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQDEM---QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~---~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +.++.+.+++..+.+.. .... +++|.+++++|.. .+...+++++++|+++.+|..... ..++....+.++
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~ 283 (342)
T cd08266 206 RA-KELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQ 283 (342)
T ss_pred HH-HHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcc
Confidence 66 66787777766554332 2222 2799999999986 588899999999999999876532 233433446788
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.++.......+..++++++++.+.+.+ +.|++++++++++.+.++...+|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 284 LSILGSTMGTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred eEEEEEecCCHHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 899988877778899999999999888765 899999999999999887777899876
No 97
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.90 E-value=5.1e-22 Score=157.94 Aligned_cols=208 Identities=22% Similarity=0.209 Sum_probs=158.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCC----------CCCCEEEEEcC-chHHHHHHHHHHHCCCeEE
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVT 70 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~ 70 (220)
+++.+.++++|+++++++++.+++.+.+||+++.....+ .++++++|+|+ |++|++++++++.+|++++
T Consensus 104 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~ 183 (339)
T cd08249 104 VADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVI 183 (339)
T ss_pred EechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEE
Confidence 467788999999999999999999999999998765444 78999999997 9999999999999999998
Q ss_pred EEeCCcccHHHHHHHcCCcEEecCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHhcccc--CCEEEEecCCCCCcc
Q 027668 71 VISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKS--QGKLVLLGAPEKPLE 144 (220)
Q Consensus 71 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~--~g~iv~~g~~~~~~~ 144 (220)
++. ++++++.+ +++|++.+++..+.+ .+.+..+ ++|++||++|.+..+..+++++++ +|+++.+|.......
T Consensus 184 ~~~-~~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~ 261 (339)
T cd08249 184 TTA-SPKNFDLV-KSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETE 261 (339)
T ss_pred EEE-CcccHHHH-HhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCcccc
Confidence 887 45666666 789998888876543 3334433 799999999985578899999999 999999987653221
Q ss_pred cCccccccCCcEEEEe-------eccCHHHHHHHHHHHHhCCcceeE-EEEe--cccHHHHHHHHHcCC-cceEEEEEe
Q 027668 145 LPAFPLLTGEKIVGGS-------LIGGLKETQEMIDFAAKHNIRADI-EVIP--ADYVNTAMERLAKAD-VRYRFVIDV 212 (220)
Q Consensus 145 ~~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~~i-~~~~--~~~i~~a~~~~~~~~-~~~k~v~~~ 212 (220)
+.. ............ .......+..++++++++.+.+.. ..++ ++++++|++.+.+++ ..+|+|+++
T Consensus 262 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 262 PRK-GVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred CCC-CceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 110 000011111110 011124577788999999888754 6777 999999999999888 778999864
No 98
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.90 E-value=7.9e-22 Score=156.59 Aligned_cols=207 Identities=19% Similarity=0.258 Sum_probs=165.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCC-----CCEEEEEcC-chHHHHHHHHHHHCC-CeEEEEeC
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVIST 74 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~G~-g~~G~~~~~~~~~~g-~~v~~~~~ 74 (220)
.++.+.++++|+++++++++.+++.+.++|+++.....+.+ |++|+|+|+ |++|++++++++.+| ++|++++.
T Consensus 104 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~ 183 (336)
T cd08252 104 LVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATAS 183 (336)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcC
Confidence 46778899999999999999999999999999876666777 999999996 999999999999999 89999999
Q ss_pred CcccHHHHHHHcCCcEEecCCC--HHHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccc
Q 027668 75 SPSKKSEAVERLGADSFLVSRD--QDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~ 151 (220)
++++.+.+ +++|++.+++..+ .+.+.... +++|++|||+|....+..++++++++|+++.+|... ..++...+.
T Consensus 184 ~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~ 260 (336)
T cd08252 184 RPESIAWV-KELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLK 260 (336)
T ss_pred ChhhHHHH-HhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--Ccccchhhh
Confidence 88887777 7899988887653 12333333 379999999997556889999999999999998653 234444444
Q ss_pred cCCcEEEEeeccC------------HHHHHHHHHHHHhCCcceeE----EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 152 TGEKIVGGSLIGG------------LKETQEMIDFAAKHNIRADI----EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~i~~~~~~~------------~~~~~~~~~~~~~~~~~~~i----~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.++.+..... ...+..+++++.++.+.+.. ..+++++++++++.+.++...+|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 261 SKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 6777777643321 13477888999999988653 347999999999999988877888763
No 99
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.90 E-value=3.9e-22 Score=158.72 Aligned_cols=207 Identities=17% Similarity=0.213 Sum_probs=158.2
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
+++.+.++++|+++++++++.+ ..+.++++++.. ...+|++|+|.|+|++|++++|+++.+|+ +++++++++++.+
T Consensus 126 ~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 202 (341)
T PRK05396 126 VIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLE 202 (341)
T ss_pred EechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 4677889999999999888744 444555554433 24689999999889999999999999999 6777776766654
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCc
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEK 155 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~ 155 (220)
.+ +++|++.++++.+. +.+.+..+ ++|++|||.|....+...+++++++|+++.+|......+++...+..++.
T Consensus 203 ~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 281 (341)
T PRK05396 203 LA-RKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGL 281 (341)
T ss_pred HH-HHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcce
Confidence 44 78999988877653 33444443 89999999987667889999999999999999765544555556677888
Q ss_pred EEEEeeccC-HHHHHHHHHHHHhC-CcceeE-EEEecccHHHHHHHHHcCCcceEEEEEeC
Q 027668 156 IVGGSLIGG-LKETQEMIDFAAKH-NIRADI-EVIPADYVNTAMERLAKADVRYRFVIDVA 213 (220)
Q Consensus 156 ~i~~~~~~~-~~~~~~~~~~~~~~-~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~~ 213 (220)
++.++.... ...+..+++++.++ .+.+.+ +.++++++++|++.+.++. .+|++++++
T Consensus 282 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 282 TIKGIYGREMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred EEEEEEccCccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 888765322 23456678888888 344445 8999999999999998876 689998764
No 100
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.90 E-value=1.3e-22 Score=151.03 Aligned_cols=192 Identities=17% Similarity=0.185 Sum_probs=160.0
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
++.+.+.|||..++.++..+.|++|+|-|| |.+|+.+.|+|+.+||+|+..+.++++...+..+||.+..+|+.++..+
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~ 212 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDL 212 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCH
Confidence 678899999999999999999999999997 9999999999999999999999999999999889999999999886322
Q ss_pred H----Hhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC---Cccc---CccccccCCcEEEEeeccCH----
Q 027668 101 Q----AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK---PLEL---PAFPLLTGEKIVGGSLIGGL---- 165 (220)
Q Consensus 101 ~----~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~---~~~~---~~~~~~~~~~~i~~~~~~~~---- 165 (220)
. ... +|+|+-||.+|+. .++..+..|+..|+++.+|..+. ..+. +....+.|++.+.|+.....
T Consensus 213 ~~aL~r~~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~ 291 (343)
T KOG1196|consen 213 SAALKRCFPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKY 291 (343)
T ss_pred HHHHHHhCCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhh
Confidence 2 222 3999999999998 68999999999999999997652 1111 12345778899988765432
Q ss_pred -HHHHHHHHHHHhCCcceeEEEE-ecccHHHHHHHHHcCCcceEEEEEeCC
Q 027668 166 -KETQEMIDFAAKHNIRADIEVI-PADYVNTAMERLAKADVRYRFVIDVAN 214 (220)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~i~~~-~~~~i~~a~~~~~~~~~~~k~v~~~~~ 214 (220)
+.+..+.+++++|+|+..-+++ .+++.++||.-|.+++..||.++.+..
T Consensus 292 ~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 292 PKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred HHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence 3357788899999998876444 599999999999999999999998864
No 101
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.90 E-value=7.4e-22 Score=155.13 Aligned_cols=209 Identities=25% Similarity=0.332 Sum_probs=166.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|++++..+++.+.+.+.++++++.....+.+|++++|+|+ |++|++++++++.+|+++++++.++++.+
T Consensus 96 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 175 (320)
T cd05286 96 VVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE 175 (320)
T ss_pred EecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 46778899999999999999999999999999887777899999999996 99999999999999999999998888877
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +++|++.+++..+.+ .+....+ ++|.+|+|+++. ....++++++++|+++.+|..... ..++...+..++
T Consensus 176 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 253 (320)
T cd05286 176 LA-RAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGS 253 (320)
T ss_pred HH-HHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcC
Confidence 77 779998888766533 3334443 799999999985 688899999999999999875432 223333333677
Q ss_pred cEEEEeec----cCH----HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 155 KIVGGSLI----GGL----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~i~~~~~----~~~----~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.++.+... ... ..+..+++++.++.+.+.. +.|++++++++++.+..+...+|+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 254 LFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred cEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 77765432 122 2245678888889887655 8999999999999999888778988753
No 102
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.90 E-value=9.8e-22 Score=157.78 Aligned_cols=206 Identities=20% Similarity=0.258 Sum_probs=157.3
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
+++.+.++++|++++++++++. ..+.++++++ ....+.+|++++|+|+|++|++++++++..|++ ++++++++++.+
T Consensus 143 ~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 220 (364)
T PLN02702 143 VHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLS 220 (364)
T ss_pred EcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4677889999999999888742 2334477777 445578999999999999999999999999995 666666665555
Q ss_pred HHHHHcCCcEEecCC--CH---HHHHHh---c-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccc
Q 027668 81 EAVERLGADSFLVSR--DQ---DEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~--~~---~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~ 151 (220)
.++++|++.+++.. +. +.+.++ . +++|++|||+|....+..++++++++|+++.+|.......++...+.
T Consensus 221 -~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 299 (364)
T PLN02702 221 -VAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAA 299 (364)
T ss_pred -HHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHH
Confidence 44789998776532 11 233322 2 37999999999766789999999999999999975433344455667
Q ss_pred cCCcEEEEeeccCHHHHHHHHHHHHhCCcce--eE-EEEec--ccHHHHHHHHHcCCcceEEEEE
Q 027668 152 TGEKIVGGSLIGGLKETQEMIDFAAKHNIRA--DI-EVIPA--DYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 152 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~i-~~~~~--~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.+++++.++... ...+..++++++++.+.+ .+ ++|++ +++++|++.+.+++..+|+++.
T Consensus 300 ~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 300 AREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred hCccEEEEeccC-hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 788999987654 457889999999998753 34 78666 7999999999888777899985
No 103
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.89 E-value=1e-21 Score=156.27 Aligned_cols=206 Identities=15% Similarity=0.174 Sum_probs=157.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
+++++.++++|++++.+.+ ++...+.++++++ .....+|++++|.|+|++|++++|+++.+|++ |+++.+++++.+
T Consensus 124 ~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~ 200 (340)
T TIGR00692 124 VVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLE 200 (340)
T ss_pred EeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4667789999999998655 5677788888876 23468999999988899999999999999996 877866655554
Q ss_pred HHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCcc-ccccCC
Q 027668 81 EAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF-PLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~-~~~~~~ 154 (220)
..+++|++.+++..+. +.+.+..+ ++|++|||+|....+...+++++++|+++.+|......+++.. .+..++
T Consensus 201 -~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 279 (340)
T TIGR00692 201 -LAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKG 279 (340)
T ss_pred -HHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcc
Confidence 4478999888876543 33444443 7999999998766688899999999999999876433333333 455677
Q ss_pred cEEEEeecc-CHHHHHHHHHHHHhCCcc--eeE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 155 KIVGGSLIG-GLKETQEMIDFAAKHNIR--ADI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~i~~~~~~-~~~~~~~~~~~~~~~~~~--~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.++.+.... ..+.+.+++++++++.++ +.+ +.+++++++++++.+.+++. +|+++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 280 LTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred eEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 777765422 234578899999999987 334 89999999999999987774 8999864
No 104
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.89 E-value=1.2e-21 Score=156.03 Aligned_cols=206 Identities=18% Similarity=0.247 Sum_probs=157.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~ 80 (220)
+++.+.++++|++++.+.+ ++...+.++++++. ....+|++|+|.|+|.+|++++|+++.+|+ +++++++++++.+
T Consensus 126 ~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 202 (341)
T cd05281 126 VVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLE 202 (341)
T ss_pred EechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 5677899999999998554 56666777777765 235799999999889999999999999999 7888866666654
Q ss_pred HHHHHcCCcEEecCCCHH--HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCcc-ccccCCc
Q 027668 81 EAVERLGADSFLVSRDQD--EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF-PLLTGEK 155 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~--~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~-~~~~~~~ 155 (220)
.+ +++|++.+++....+ .+.+..+ ++|++|||+|.......++++++++|+++.+|.......++.. .+..++.
T Consensus 203 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 281 (341)
T cd05281 203 LA-KKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGL 281 (341)
T ss_pred HH-HHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccce
Confidence 44 789998887665422 3344443 8999999998766678899999999999999865443333322 2556777
Q ss_pred EEEEeeccC-HHHHHHHHHHHHhCCcce--eE-EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 156 IVGGSLIGG-LKETQEMIDFAAKHNIRA--DI-EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 156 ~i~~~~~~~-~~~~~~~~~~~~~~~~~~--~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.+.++.... .+.+..+++++.++.+.+ .+ +++++++++++++.+.+++ .+|+++++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 282 TVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred EEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 777765322 356788999999998863 34 7899999999999999888 88999864
No 105
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.89 E-value=3.8e-22 Score=154.37 Aligned_cols=203 Identities=24% Similarity=0.328 Sum_probs=155.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+ +.+.+||+++.. ..++++++++|+|+|++|++++++++.+|++ |+++++++++.+
T Consensus 59 ~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~ 136 (277)
T cd08255 59 VVPANLLVPLPDGLPPERAALT-ALAATALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE 136 (277)
T ss_pred EcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH
Confidence 4677899999999999999888 789999999864 5689999999999999999999999999997 999988888876
Q ss_pred HHHHHcC-CcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEE
Q 027668 81 EAVERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGG 159 (220)
Q Consensus 81 ~~~~~~g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~ 159 (220)
.++++| .+.+++..+. .. -.+++|.+|||++........+++++++|+++.+|............+..++.++.+
T Consensus 137 -~~~~~g~~~~~~~~~~~-~~--~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd08255 137 -LAEALGPADPVAADTAD-EI--GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRS 212 (277)
T ss_pred -HHHHcCCCccccccchh-hh--cCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEe
Confidence 557888 5555443221 10 113799999998876678889999999999999987654311111223445556665
Q ss_pred eeccC------------HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcC-CcceEEEE
Q 027668 160 SLIGG------------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKA-DVRYRFVI 210 (220)
Q Consensus 160 ~~~~~------------~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~-~~~~k~v~ 210 (220)
..... .+.++++++++.++.+++.+ +.+++++++++++.+.++ ....|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 213 SQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 54321 24578899999999988765 899999999999999877 23356653
No 106
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.89 E-value=9.9e-22 Score=155.61 Aligned_cols=205 Identities=22% Similarity=0.296 Sum_probs=162.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|++ +.+++.+...+.+||+++.....+++|++++|+|+ |.+|++++++++..|++|+++++++++.+
T Consensus 101 ~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 101 VVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred EechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 4677889999997 35677899999999999987777899999999996 99999999999999999999998888777
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-----------ccc
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-----------LEL 145 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-----------~~~ 145 (220)
.+ +++|++.+++..+.+ .+.... +++|++|||+|.. .+...+++++++|+++.+|..... ..+
T Consensus 179 ~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 256 (329)
T cd08250 179 FL-KSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATL 256 (329)
T ss_pred HH-HHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEecccCCcccCcccccccccc
Confidence 66 779988887665532 232322 3799999999975 688899999999999999875421 111
Q ss_pred CccccccCCcEEEEeeccC-----HHHHHHHHHHHHhCCcceeE---EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 146 PAFPLLTGEKIVGGSLIGG-----LKETQEMIDFAAKHNIRADI---EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 146 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~i---~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
+ ...+.++.++.++.... .+.+..+++++.++.+.+.+ +.++++++++|++.+.+++..+|++++
T Consensus 257 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 257 P-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred c-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 1 23356788888876532 34467888999999888743 569999999999999988777888863
No 107
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.89 E-value=1.7e-21 Score=154.54 Aligned_cols=204 Identities=21% Similarity=0.260 Sum_probs=161.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe-EEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+ ..+.++++++ ....+++|++|+|+|+|.+|++++++++.+|++ ++++++++++.+
T Consensus 121 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 198 (334)
T cd08234 121 VVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLE 198 (334)
T ss_pred EecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4677889999999999998765 6778888888 455689999999999899999999999999997 888888887776
Q ss_pred HHHHHcCCcEEecCCCHHHH--HHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccCccccccCCc
Q 027668 81 EAVERLGADSFLVSRDQDEM--QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGEK 155 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~--~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~~~~~~~~~~ 155 (220)
.+ +++|.+.+++..+.+.. +... +++|++|||+|....+...+++++++|+++.+|.... ..+++...+..++.
T Consensus 199 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 277 (334)
T cd08234 199 LA-KKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKEL 277 (334)
T ss_pred HH-HHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCc
Confidence 66 78898777776543221 2222 3799999999876668889999999999999987543 23444444445778
Q ss_pred EEEEeeccCHHHHHHHHHHHHhCCccee--E-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 156 IVGGSLIGGLKETQEMIDFAAKHNIRAD--I-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
++.+... ....++.+++++.++.+.+. + .++++++++++++.+.+ ...+|+++
T Consensus 278 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 278 TIIGSFI-NPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred EEEEecc-CHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 8877754 34568889999999988752 3 78999999999999998 66688875
No 108
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.89 E-value=2.5e-21 Score=152.97 Aligned_cols=209 Identities=22% Similarity=0.237 Sum_probs=162.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhH---hccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~---~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~ 77 (220)
.++.+.++++|+++++++++.+++.+++++.++. .....+++++++|+|+ |++|++++|+++.+|+++++++.+++
T Consensus 103 ~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~ 182 (324)
T cd08288 103 RVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPE 182 (324)
T ss_pred EEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4677889999999999999999999999887754 3442236789999997 99999999999999999999998888
Q ss_pred cHHHHHHHcCCcEEecCCCHH-HHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCC
Q 027668 78 KKSEAVERLGADSFLVSRDQD-EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (220)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~-~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~ 154 (220)
+++.+ +++|++.++++.+.. .+..... ++|.+||+++.. .+..++..++.+|+++.+|.... ...++...++.++
T Consensus 183 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~ 260 (324)
T cd08288 183 EADYL-RSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRG 260 (324)
T ss_pred HHHHH-HhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccc
Confidence 87777 789998888876532 2333333 789999999975 46778888999999999987532 2233444444688
Q ss_pred cEEEEeecc--C----HHHHHHHHHHHHhCCcceeEEEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 155 KIVGGSLIG--G----LKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 155 ~~i~~~~~~--~----~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
.++.+.... . .+.+..+.+++.++.+.+..+.+++++++++++.+.+++..+|+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 261 VTLLGIDSVMAPIERRRAAWARLARDLDPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cEEEEEEeecccchhhHHHHHHHHHHHhcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 888886421 1 234666777888887766458999999999999999888888998763
No 109
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.89 E-value=1.9e-21 Score=153.25 Aligned_cols=208 Identities=25% Similarity=0.350 Sum_probs=165.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+.+.+.+||+++.....+.+|++++|+|+ |.+|++++++++.+|++|+++++++++.+
T Consensus 104 ~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 183 (325)
T cd08253 104 VVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAE 183 (325)
T ss_pred EecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45667899999999999999999999999999988777899999999996 99999999999999999999999888877
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCc
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEK 155 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~ 155 (220)
.+ +++|++.+++....+ .+.+... ++|.+++|+|.. .....+++++++|+++.+|.......++...++.++.
T Consensus 184 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 261 (325)
T cd08253 184 LV-RQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEA 261 (325)
T ss_pred HH-HHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCc
Confidence 77 678988887766543 3333332 799999999987 4788899999999999998755333444444456677
Q ss_pred EEEEeeccC--H----HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 156 IVGGSLIGG--L----KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 156 ~i~~~~~~~--~----~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
++.+...+. . +.+..+.+++.++.+.+.. +++++++++++++.+..+...+|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~ 324 (325)
T cd08253 262 SIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLD 324 (325)
T ss_pred eEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 776654332 1 2245556677788877655 899999999999999988877898875
No 110
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.89 E-value=2.4e-21 Score=152.41 Aligned_cols=207 Identities=29% Similarity=0.341 Sum_probs=166.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+...+.++|+++.....+.++++++|+|+ |++|++++++++..|++++++++++++.+
T Consensus 99 ~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~ 178 (323)
T cd05276 99 VVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE 178 (323)
T ss_pred EcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45677899999999999999999999999999887777899999999997 99999999999999999999999888777
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~ 154 (220)
.+ +++|.+.+++....+ .+.... +++|++||++|... ....+++++++|+++.+|.... ...++...++.++
T Consensus 179 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~ 256 (323)
T cd05276 179 AC-RALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKR 256 (323)
T ss_pred HH-HHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhC
Confidence 66 678988887766543 233333 27999999999874 7889999999999999987543 2344444455688
Q ss_pred cEEEEeeccCH----------HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 155 KIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 155 ~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.++.++..... ..+.++++++.++.+.+.. +.|++++++++++.+.++...+|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 257 LTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred CeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 88888765432 2246677888888887655 89999999999999988777778763
No 111
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.88 E-value=1.1e-20 Score=148.98 Aligned_cols=208 Identities=29% Similarity=0.336 Sum_probs=166.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++..++++...+.++|+++.....+.++++++|+|+ |++|++++++++.+|++++++.+++++.+
T Consensus 99 ~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
T TIGR02824 99 AVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA 178 (325)
T ss_pred EecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999877777899999999996 99999999999999999999998887776
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~ 154 (220)
.+ +++|.+.+++....+ .+....+ ++|.+++|+|.. ....++++++++|+++.+|.... ...++...++.++
T Consensus 179 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (325)
T TIGR02824 179 AC-EALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKR 256 (325)
T ss_pred HH-HHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcC
Confidence 55 788987777665533 2333333 799999999986 57889999999999999987542 2244444555788
Q ss_pred cEEEEeeccCH----------HHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIGGL----------KETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.+...... ..+..+++++.++.+.+.. +.+++++++++++.+.++...+|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 257 LTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLT 324 (325)
T ss_pred CEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEe
Confidence 99888764331 2245567888888887655 889999999999999888777888875
No 112
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.87 E-value=5.7e-21 Score=147.97 Aligned_cols=205 Identities=24% Similarity=0.347 Sum_probs=160.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++++.+.+.++|+++.....+.+|++|+|+|+ |.+|++++++++.+|++|+++++++++.+
T Consensus 64 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 143 (288)
T smart00829 64 RTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD 143 (288)
T ss_pred EccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999866667899999999995 99999999999999999999998888877
Q ss_pred HHHHHcCC--cEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccCccccc
Q 027668 81 EAVERLGA--DSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g~--~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~~~~~~ 151 (220)
.+ +++|+ +.+++..+.+ .+....+ ++|.++|++|.. ....++++++++|+++.+|.... ...++... +
T Consensus 144 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~ 220 (288)
T smart00829 144 FL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-F 220 (288)
T ss_pred HH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcEEEEEcCcCCccccccchhh-h
Confidence 77 78997 6677665533 2333332 799999999864 68889999999999999986532 22233322 3
Q ss_pred cCCcEEEEeecc----C----HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEE
Q 027668 152 TGEKIVGGSLIG----G----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFV 209 (220)
Q Consensus 152 ~~~~~i~~~~~~----~----~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v 209 (220)
.++.++.+.... . ...+..+++++.++.+.+.. +.|++++++++++.+..+...+|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 221 RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 455665554321 1 23466788888889887644 8899999999999998877667776
No 113
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.87 E-value=7.6e-21 Score=149.67 Aligned_cols=207 Identities=29% Similarity=0.405 Sum_probs=165.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|++++..+++.+...+.+||+++.....+.++++++|+|+ |++|++++++++..|++|++++.++++.+
T Consensus 99 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (323)
T cd08241 99 VVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA 178 (323)
T ss_pred EcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 35677899999999999998899999999999886677899999999997 99999999999999999999999888777
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcc-cCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLE-LPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~-~~~~~~~~~~ 154 (220)
.+ +++|++.+++..+.+ .+....+ ++|.+++|+|.. ....++++++++|+++.+|....... ++....+.++
T Consensus 179 ~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 256 (323)
T cd08241 179 LA-RALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKN 256 (323)
T ss_pred HH-HHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcC
Confidence 66 678887777766533 3334433 799999999985 57889999999999999987543322 3333345678
Q ss_pred cEEEEeeccC---------HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 155 KIVGGSLIGG---------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 155 ~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.++.+..... ...+..+++++.++.+.+.. +.|++++++++++.+..+...+|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv 322 (323)
T cd08241 257 ISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVL 322 (323)
T ss_pred cEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 8888765432 24567788899999887655 89999999999999987776678875
No 114
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.87 E-value=1.1e-20 Score=149.00 Aligned_cols=205 Identities=26% Similarity=0.331 Sum_probs=163.0
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++..++.++..+.+||+++.....+.+|++++|+|+ |++|++++++++.+|++|++++++ ++.+
T Consensus 104 ~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~ 182 (326)
T cd08272 104 VVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAA 182 (326)
T ss_pred EecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHH
Confidence 45678899999999999999999999999999877777899999999995 999999999999999999999887 7666
Q ss_pred HHHHHcCCcEEecCCCH--HHHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcE
Q 027668 81 EAVERLGADSFLVSRDQ--DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKI 156 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~ 156 (220)
.+ +++|.+.+++.... +.+.+..+ ++|.++||+|.. .....+++++++|+++.+|... .. +......++.+
T Consensus 183 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~~--~~~~~~~~~~~ 257 (326)
T cd08272 183 FA-RSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-TH--DLAPLSFRNAT 257 (326)
T ss_pred HH-HHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-cc--chhhHhhhcce
Confidence 66 77998877776543 22333333 799999999986 5788999999999999988654 22 22222356777
Q ss_pred EEEeeccC-----------HHHHHHHHHHHHhCCcceeE--EEEecccHHHHHHHHHcCCcceEEEEEe
Q 027668 157 VGGSLIGG-----------LKETQEMIDFAAKHNIRADI--EVIPADYVNTAMERLAKADVRYRFVIDV 212 (220)
Q Consensus 157 i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~i--~~~~~~~i~~a~~~~~~~~~~~k~v~~~ 212 (220)
+.+..... ...+..+++++.++.+.+.+ +.|++++++++++.+.+++..+|+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 258 YSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred EEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 76654322 34577888899999887653 8899999999999998877778988763
No 115
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.87 E-value=1.3e-20 Score=148.32 Aligned_cols=206 Identities=27% Similarity=0.319 Sum_probs=153.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++.+.+.+.+||+++.....+.+|++++|+|+ |++|++++++++.+|++|++++.+ ++.+
T Consensus 103 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~ 181 (319)
T cd08267 103 VAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAE 181 (319)
T ss_pred EechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHH
Confidence 45678899999999999999999999999999988887899999999997 999999999999999999988865 5555
Q ss_pred HHHHHcCCcEEecCCCHHHHHHhc--CCccEEEEcCCCc-ccHHHHHhccccCCEEEEecCCCCCcccC-----cccc-c
Q 027668 81 EAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPEKPLELP-----AFPL-L 151 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~-~~~~~~~~~l~~~g~iv~~g~~~~~~~~~-----~~~~-~ 151 (220)
.+ +++|.+.+++....+...... +++|++++|+|.. ......+..++++|+++.+|......... .... .
T Consensus 182 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~ 260 (319)
T cd08267 182 LV-RSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGG 260 (319)
T ss_pred HH-HHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccc
Confidence 55 789988777765433222222 2799999999853 12334444599999999998764321111 1111 1
Q ss_pred cCCcEEEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 152 TGEKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.+...... .....+.+..+++++.++.+.+.+ +.|++++++++++.+.++...+|+++
T Consensus 261 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 261 GRRLKFFL-AKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred cceEEEEE-ecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 12222222 222367789999999999988755 89999999999999988776677763
No 116
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.87 E-value=4.6e-21 Score=150.38 Aligned_cols=175 Identities=23% Similarity=0.277 Sum_probs=141.3
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCC-cccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS-PSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~ 80 (220)
+++.+.++++|+++++++++ +...+.++|+++.....++++++|+|.|+|.+|++++++++.+|++|++++.+ ++...
T Consensus 125 ~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~ 203 (306)
T cd08258 125 LVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRL 203 (306)
T ss_pred EcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHH
Confidence 46778899999999999886 77788899999877777899999999888999999999999999998877433 33233
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC-CcccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~-~~~~~~~~~~~~~ 154 (220)
.+++++|++.+ ++...+ .+.+..+ ++|.+|||+|....+...+++++++|+++.+|.... ...++...++.++
T Consensus 204 ~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 282 (306)
T cd08258 204 DVAKELGADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKE 282 (306)
T ss_pred HHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcC
Confidence 45578998777 665432 3333333 799999999876568889999999999999998652 3455666677899
Q ss_pred cEEEEeeccCHHHHHHHHHHHHhC
Q 027668 155 KIVGGSLIGGLKETQEMIDFAAKH 178 (220)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~ 178 (220)
+++.|+..+++++++++++++++|
T Consensus 283 ~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 283 LSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred cEEEEEecCchHhHHHHHHHHhcC
Confidence 999999999999999999999875
No 117
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.87 E-value=2.7e-20 Score=148.62 Aligned_cols=206 Identities=29% Similarity=0.348 Sum_probs=156.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCC----CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCc
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP----GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~ 76 (220)
.++++.++++|++++++.++.+++.+.++|+++.....+.+ |++++|+|+ |++|++++++++.+|++|+++.++
T Consensus 118 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~- 196 (350)
T cd08248 118 VVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST- 196 (350)
T ss_pred EecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-
Confidence 46778999999999999999999999999999877776654 999999996 999999999999999998888765
Q ss_pred ccHHHHHHHcCCcEEecCCCHHHHHHhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--c--ccC--cc
Q 027668 77 SKKSEAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--L--ELP--AF 148 (220)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~--~--~~~--~~ 148 (220)
++. .+++++|.+.+++..+.+...++. +++|++|||+|.. ....++++++++|+++.+|..... . ... ..
T Consensus 197 ~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 274 (350)
T cd08248 197 DAI-PLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGML 274 (350)
T ss_pred chH-HHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhh
Confidence 444 455789988888776644444433 3799999999987 688999999999999999854311 0 110 00
Q ss_pred ----cccc-------CCcEEE-EeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 149 ----PLLT-------GEKIVG-GSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 149 ----~~~~-------~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.+.. +...+. +........+..+++++.++.+.+.+ +.|++++++++++.+.+++..+|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 275 KSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI 349 (350)
T ss_pred hhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence 0000 111111 11122356789999999999987666 89999999999999988776678875
No 118
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.87 E-value=1.7e-20 Score=146.55 Aligned_cols=205 Identities=20% Similarity=0.268 Sum_probs=158.6
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
+++.+.++++|+++++++++.++..+.+||++++ ...+++|++++|+|+ |.+|++++++++.+|++++++++++++.+
T Consensus 81 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 159 (303)
T cd08251 81 TVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLE 159 (303)
T ss_pred EccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 5677889999999999999999999999999986 456899999999975 99999999999999999999998888777
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC--CcccCccccccC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~--~~~~~~~~~~~~ 153 (220)
.+ +++|.+.+++....+ .+....+ ++|.++|+++.. .....+++++++|+++.+|.... ...++... +.+
T Consensus 160 ~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~ 236 (303)
T cd08251 160 YL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSN 236 (303)
T ss_pred HH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccCcEEEEEeccCCCccCccChhH-hhc
Confidence 77 789998888766533 3334443 799999999875 58889999999999999876532 12222222 222
Q ss_pred CcEEEEeec-----cC----HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 154 EKIVGGSLI-----GG----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 154 ~~~i~~~~~-----~~----~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
+..+..... .. .+.+.++++++.++.+++.. +.+++++++++++.+.+++..+|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 237 NQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 333322211 11 13467788899999888655 89999999999999998877778763
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.86 E-value=2e-20 Score=146.42 Aligned_cols=201 Identities=26% Similarity=0.356 Sum_probs=158.5
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++...++++|+++++..++.+.+.+.++|+++.....+.++++++|+|+ |.+|++++++++..|+++++++.++ +.+
T Consensus 104 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~ 182 (309)
T cd05289 104 VVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NAD 182 (309)
T ss_pred EecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHH
Confidence 45677889999999999999999999999999988877899999999997 9999999999999999999888776 555
Q ss_pred HHHHHcCCcEEecCCCHHHHHHhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEE
Q 027668 81 EAVERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGG 159 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~ 159 (220)
.+ +++|.+.+++....+..+... +++|.+|+|+|.. ....++++++++|+++.+|....... ....++.++..
T Consensus 183 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~ 256 (309)
T cd05289 183 FL-RSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGF 256 (309)
T ss_pred HH-HHcCCCEEEeCCCCchhhccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEE
Confidence 55 788987777665533222112 2799999999987 68889999999999999987543211 22234455444
Q ss_pred eeccC-HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEE
Q 027668 160 SLIGG-LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFV 209 (220)
Q Consensus 160 ~~~~~-~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v 209 (220)
..... ...+..+++++.++.+.+.+ +.|++++++++++.+..++..+|++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 257 VFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred EEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 43221 56788999999999887655 8999999999999998877666766
No 120
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.86 E-value=4.9e-20 Score=145.98 Aligned_cols=205 Identities=23% Similarity=0.276 Sum_probs=155.2
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++++++++.+.+.+||+++.....+.+|++++|+|+ |++|++++++++..|++|++++. +++.+
T Consensus 99 ~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~ 177 (331)
T cd08273 99 NLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHA 177 (331)
T ss_pred EechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHH
Confidence 45677899999999999999999999999999988777899999999997 99999999999999999998887 65655
Q ss_pred HHHHHcCCcEEecCCCHHHHH-Hhc-CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCc----ccCc-------
Q 027668 81 EAVERLGADSFLVSRDQDEMQ-AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL----ELPA------- 147 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~-~~~-~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~----~~~~------- 147 (220)
.+ +++|+..+ +....+... ... +++|.++||+|... ...++++++.+|+++.+|...... ++++
T Consensus 178 ~~-~~~g~~~~-~~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T cd08273 178 AL-RELGATPI-DYRTKDWLPAMLTPGGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLAR 254 (331)
T ss_pred HH-HHcCCeEE-cCCCcchhhhhccCCCceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhh
Confidence 55 77886543 333322211 222 37999999999875 888999999999999998764321 1111
Q ss_pred -----cccccCCcEEEEeecc-------CHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 148 -----FPLLTGEKIVGGSLIG-------GLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 148 -----~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
...+.+..+..+.... ..+.+..++++++++.+.+.+ +.+++++++++++.+.+++..+|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 255 LAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred hhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 0112223333222211 135678889999999988765 89999999999999988877788875
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.86 E-value=4e-20 Score=143.37 Aligned_cols=206 Identities=21% Similarity=0.283 Sum_probs=160.3
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+.+.+.++|.++.....+++|++++|+|+ |.+|++++++++.+|++++++++++++.+
T Consensus 68 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 147 (293)
T cd05195 68 RVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKRE 147 (293)
T ss_pred EechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999877777899999999985 99999999999999999999999888776
Q ss_pred HHHHHcC--CcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC--cccCccccc
Q 027668 81 EAVERLG--ADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAFPLL 151 (220)
Q Consensus 81 ~~~~~~g--~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~--~~~~~~~~~ 151 (220)
.+ +..+ ++.+++..+.+ .+.+... ++|.++||+|.. .+..++++++++|+++.+|..... ..++... +
T Consensus 148 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~ 224 (293)
T cd05195 148 FL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-F 224 (293)
T ss_pred HH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccCceEEEeeccccccCCccchhh-h
Confidence 66 4566 66777765533 3334432 799999999987 689999999999999999875432 1222222 3
Q ss_pred cCCcEEEEeecc-----C----HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 152 TGEKIVGGSLIG-----G----LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 152 ~~~~~i~~~~~~-----~----~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
.++.++...... . ...+..+++++.++.+.+.. +.+.+++++++++.+..++..+|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 225 LRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred ccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 345555543321 1 23467788899999988665 78999999999999998877677763
No 122
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.86 E-value=7.6e-20 Score=144.35 Aligned_cols=208 Identities=23% Similarity=0.306 Sum_probs=163.9
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|+++++.+++.+.+.+.++|+++.....+.++++++|+|+ |.+|++++++++..|+++++++.++++.+
T Consensus 104 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~ 183 (328)
T cd08268 104 LVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD 183 (328)
T ss_pred EechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 46778899999999999999999999999999887777889999999997 99999999999999999999999888777
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC-cccCccccccCC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~-~~~~~~~~~~~~ 154 (220)
.+ +++|.+.+++....+ .+.+... ++|++++++|.. ....++++++++|+++.+|..... ..++....+.++
T Consensus 184 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 261 (328)
T cd08268 184 AL-LALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKS 261 (328)
T ss_pred HH-HHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcC
Confidence 76 678887777765432 2333333 799999999985 578899999999999999865432 233333346678
Q ss_pred cEEEEeeccC----HHH----HHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 155 KIVGGSLIGG----LKE----TQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 155 ~~i~~~~~~~----~~~----~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
.++.+..... ... ++.+.+++.++.+.+.. ..|++++++++++.+..++..+|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 262 LTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred CEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 8877765432 223 34445566677777655 889999999999999888777898875
No 123
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.86 E-value=7.2e-20 Score=146.36 Aligned_cols=203 Identities=23% Similarity=0.232 Sum_probs=150.3
Q ss_pred ceeeCCCCCCcccccccchhhhhhhhhhHhcc-CCCCCCEEEEEcC-chHHHHHHHHHHHCC-C-eEEEEeCCcccHHHH
Q 027668 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGL-GGLGHVAVKFAKAMG-V-KVTVISTSPSKKSEA 82 (220)
Q Consensus 7 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~vlI~G~-g~~G~~~~~~~~~~g-~-~v~~~~~~~~~~~~~ 82 (220)
.++++|+++++.+++.++..+.|||+++.... .+++|++++|+|+ |.+|++++++++..| . .++++. ++++.+.+
T Consensus 115 ~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~ 193 (352)
T cd08247 115 SITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELN 193 (352)
T ss_pred eeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHH
Confidence 68999999999999999999999999998876 6899999999997 799999999999874 4 566655 44555544
Q ss_pred HHHcCCcEEecCCCHH---H----HHHhc--CCccEEEEcCCCcccHHHHHhccc---cCCEEEEecCCC-CCcc-----
Q 027668 83 VERLGADSFLVSRDQD---E----MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK---SQGKLVLLGAPE-KPLE----- 144 (220)
Q Consensus 83 ~~~~g~~~v~~~~~~~---~----~~~~~--~~~d~vid~~g~~~~~~~~~~~l~---~~g~iv~~g~~~-~~~~----- 144 (220)
+++|++.+++..+.+ . ++..+ +++|++|||+|.......++++++ ++|+++.++... ....
T Consensus 194 -~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~ 272 (352)
T cd08247 194 -KKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFN 272 (352)
T ss_pred -HHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhh
Confidence 789998888765433 2 22333 389999999998556788899999 999999764322 1110
Q ss_pred ------cCccc----cccCCcEEEEeec-cCHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 145 ------LPAFP----LLTGEKIVGGSLI-GGLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 145 ------~~~~~----~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
..... ...+...+..... .....+..+++++.++.+.+.. ++++++++++|++.+.+++..+|++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 273 SWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred hccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 00011 1122223322211 1124578889999999988765 899999999999999988877899875
No 124
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.85 E-value=3.5e-20 Score=142.55 Aligned_cols=172 Identities=33% Similarity=0.435 Sum_probs=141.4
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
+++.+.++++|+++++++++.++..+.+||+++.....+.++++|+|+|+|++|++++++++..|.+|+++++++++.+.
T Consensus 94 ~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 94 VVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred EechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 46778999999999999999999999999999988887799999999998669999999999999999999998877766
Q ss_pred HHHHcCCcEEecCCCHHHHHH--hc--CCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccC-ccccccCCcE
Q 027668 82 AVERLGADSFLVSRDQDEMQA--AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP-AFPLLTGEKI 156 (220)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~--~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~-~~~~~~~~~~ 156 (220)
+ +++|.+.+++..+.+.... .. +++|++|++++.......++++++++|+++.+|......... ....+.++++
T Consensus 174 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~ 252 (271)
T cd05188 174 A-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELT 252 (271)
T ss_pred H-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccHHHHHhcceE
Confidence 6 6788887777665433222 22 389999999998446888999999999999998765432222 3455778999
Q ss_pred EEEeeccCHHHHHHHHHH
Q 027668 157 VGGSLIGGLKETQEMIDF 174 (220)
Q Consensus 157 i~~~~~~~~~~~~~~~~~ 174 (220)
+.++..+...++++++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~ 270 (271)
T cd05188 253 IIGSTGGTREDFEEALDL 270 (271)
T ss_pred EEEeecCCHHHHHHHHhh
Confidence 999998888888888775
No 125
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.85 E-value=1.4e-19 Score=142.87 Aligned_cols=207 Identities=26% Similarity=0.388 Sum_probs=157.1
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.++.+.++++|++++..+++.+.+.+.++++++.....+.+|++++|+|+ |.+|++++++++..|++++++. ++++.+
T Consensus 101 ~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~ 179 (325)
T cd08271 101 VVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFE 179 (325)
T ss_pred EeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHH
Confidence 45678899999999999999999999999999988877899999999997 8999999999999999988876 555655
Q ss_pred HHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCc--cccccC
Q 027668 81 EAVERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA--FPLLTG 153 (220)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~---~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~--~~~~~~ 153 (220)
.+ +++|++.+++....+ .+....+ ++|.+++|++... ....+++++++|+++.++.......... .....+
T Consensus 180 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~ 257 (325)
T cd08271 180 YV-KSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVH 257 (325)
T ss_pred HH-HHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEE
Confidence 55 778988888766532 3333333 7999999999874 6678999999999999875432211111 112223
Q ss_pred CcEEEEeeccC--------HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEEE
Q 027668 154 EKIVGGSLIGG--------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVID 211 (220)
Q Consensus 154 ~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~~ 211 (220)
+..+....... .+.+.++++++.++.+.+.. +.++++++.++++.+.++...+|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~ 324 (325)
T cd08271 258 EVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVT 324 (325)
T ss_pred EEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEE
Confidence 33333332211 13356788889899887654 889999999999999988777898875
No 126
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.83 E-value=6.5e-19 Score=139.73 Aligned_cols=208 Identities=25% Similarity=0.342 Sum_probs=157.7
Q ss_pred cccCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeC-CcccH
Q 027668 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKK 79 (220)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~-~~~~~ 79 (220)
.++.+.++++|+++++.+++.+.+.+.++|+++.....+++|++|+|+|+ |.+|++++++++.+ ..+.++.. .+++.
T Consensus 98 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~~~~~~~~~~~~~~ 176 (337)
T cd08275 98 NVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-PNVTVVGTASASKH 176 (337)
T ss_pred EecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-cCcEEEEeCCHHHH
Confidence 35677899999999999999999999999999887777899999999997 99999999999998 32233332 23355
Q ss_pred HHHHHHcCCcEEecCCCH---HHHHHhcC-CccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCC----c--------
Q 027668 80 SEAVERLGADSFLVSRDQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP----L-------- 143 (220)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~---~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~----~-------- 143 (220)
+.+ +.+|.+.+++..+. +.+....+ ++|+++||+|+. ....++++++++|+++.+|..... .
T Consensus 177 ~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 254 (337)
T cd08275 177 EAL-KENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKK 254 (337)
T ss_pred HHH-HHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccc
Confidence 545 77898878776543 33433333 799999999986 578899999999999999865421 1
Q ss_pred -----ccCccccccCCcEEEEeeccC--------HHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEE
Q 027668 144 -----ELPAFPLLTGEKIVGGSLIGG--------LKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFV 209 (220)
Q Consensus 144 -----~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v 209 (220)
.+.....+.++.++.++.... ...+..+++++.++.+.+.. +.|++++++++++.+.+++..+|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv 334 (337)
T cd08275 255 WWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVV 334 (337)
T ss_pred cccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEE
Confidence 111123456777877765321 12366788888899887665 8999999999999999887778998
Q ss_pred EEe
Q 027668 210 IDV 212 (220)
Q Consensus 210 ~~~ 212 (220)
+++
T Consensus 335 ~~~ 337 (337)
T cd08275 335 LTP 337 (337)
T ss_pred EeC
Confidence 764
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.83 E-value=6.3e-20 Score=126.18 Aligned_cols=124 Identities=31% Similarity=0.487 Sum_probs=110.2
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHhcc
Q 027668 53 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLL 127 (220)
Q Consensus 53 ~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l 127 (220)
++|++++|+|+.+|++|+++++++++++.+ +++|++.++++++. +.+++.++ ++|+||||+|....++.+++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~-~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA-KELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHH-HhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 589999999999999999999998887666 78999999988775 46666665 6999999999777899999999
Q ss_pred ccCCEEEEecCCC-CCcccCccccccCCcEEEEeeccCHHHHHHHHHHHHh
Q 027668 128 KSQGKLVLLGAPE-KPLELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAK 177 (220)
Q Consensus 128 ~~~g~iv~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 177 (220)
+++|+++.+|... ...+++...++.+++++.|+..+++++++++++++++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999988 5678888999999999999999999999999998864
No 128
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.71 E-value=2e-16 Score=126.63 Aligned_cols=175 Identities=15% Similarity=0.081 Sum_probs=136.2
Q ss_pred hhhhhHhc-cCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 027668 30 VYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 108 (220)
Q Consensus 30 a~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 108 (220)
.+.++.+. +...+|++|+|+|+|++|+.+++.++.+|++|++++.++.+.+.+ +.+|+..+. ..+...++|
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~~-------~~e~v~~aD 259 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVMT-------MEEAVKEGD 259 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEcc-------HHHHHcCCC
Confidence 34555443 334689999999999999999999999999999999888887666 678885431 112335789
Q ss_pred EEEEcCCCcccHHHH-HhccccCCEEEEecCCCCCcccCccccccCCcEEEEeeccCHH-HHH--HHHHHHHhCCc-cee
Q 027668 109 GIIDTVSAVHPLMPL-IGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSLIGGLK-ETQ--EMIDFAAKHNI-RAD 183 (220)
Q Consensus 109 ~vid~~g~~~~~~~~-~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~--~~~~~~~~~~~-~~~ 183 (220)
+||+|+|....+... +..++++|.++.+|.. ..+++...+..+++++.++..+... .|+ ..+.++++|++ +..
T Consensus 260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~ 337 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLG 337 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCc
Confidence 999999998777765 9999999999999964 4567777788899999998776533 466 78999999988 432
Q ss_pred --E-EE-----Eecc-cHHHHHHHHHcCCc-ceEEEEEeCC
Q 027668 184 --I-EV-----IPAD-YVNTAMERLAKADV-RYRFVIDVAN 214 (220)
Q Consensus 184 --i-~~-----~~~~-~i~~a~~~~~~~~~-~~k~v~~~~~ 214 (220)
+ |. ++|+ |+.+++..+.++.. ..|+++.+.+
T Consensus 338 ~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~ 378 (413)
T cd00401 338 CATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK 378 (413)
T ss_pred ccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence 3 55 8899 99999999987654 3577776644
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.64 E-value=2.8e-14 Score=117.16 Aligned_cols=142 Identities=20% Similarity=0.205 Sum_probs=108.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCH-------------H---HHHH
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQ-------------D---EMQA 102 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~---~~~~ 102 (220)
..++++|+|+|+|++|+++++.|+.+|++|++++.++++++.+ +++|++.+ ++..+. + ...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a-eslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV-ESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 3689999999999999999999999999999999999988777 78999844 544321 1 1111
Q ss_pred -hc---CCccEEEEcCCCcc-----c-HHHHHhccccCCEEEEecCCC-CC--cccCcccccc-CCcEEEEeeccCHHHH
Q 027668 103 -AM---GTMDGIIDTVSAVH-----P-LMPLIGLLKSQGKLVLLGAPE-KP--LELPAFPLLT-GEKIVGGSLIGGLKET 168 (220)
Q Consensus 103 -~~---~~~d~vid~~g~~~-----~-~~~~~~~l~~~g~iv~~g~~~-~~--~~~~~~~~~~-~~~~i~~~~~~~~~~~ 168 (220)
+. +++|++|+|+|.+. . .+.+++.++++|+++.+|... ++ .+.+..+++. +++++.|......+..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p 320 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP 320 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence 12 47999999999743 4 388999999999999999853 43 4444556665 8999999876554434
Q ss_pred HHHHHHHHhCCcce
Q 027668 169 QEMIDFAAKHNIRA 182 (220)
Q Consensus 169 ~~~~~~~~~~~~~~ 182 (220)
.+..++++++.++.
T Consensus 321 ~~As~lla~~~i~l 334 (509)
T PRK09424 321 TQSSQLYGTNLVNL 334 (509)
T ss_pred HHHHHHHHhCCccH
Confidence 46899999988754
No 130
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.63 E-value=4.2e-16 Score=106.66 Aligned_cols=117 Identities=30% Similarity=0.420 Sum_probs=77.9
Q ss_pred cCCcEEecCCCHHHHHHhcCCccEEEEcCC--CcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEeecc
Q 027668 86 LGADSFLVSRDQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSLIG 163 (220)
Q Consensus 86 ~g~~~v~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 163 (220)
+|++.++|++..+. ...+++|+||||+| ....+..++++| ++|+++.++. +........+...+......
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~ 72 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF 72 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence 68999999986555 22359999999999 544446677788 9999999884 11111111122222332222
Q ss_pred -------CHHHHHHHHHHHHhCCcceeE-EEEecccHHHHHHHHHcCCcceEEEE
Q 027668 164 -------GLKETQEMIDFAAKHNIRADI-EVIPADYVNTAMERLAKADVRYRFVI 210 (220)
Q Consensus 164 -------~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~a~~~~~~~~~~~k~v~ 210 (220)
..+.++++.+++++|.++|.+ ++|+++++.+|++.+++++..||+|+
T Consensus 73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 234599999999999999999 79999999999999999999999986
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=99.09 E-value=7.6e-09 Score=85.31 Aligned_cols=121 Identities=23% Similarity=0.244 Sum_probs=85.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCC-------------HHH-------
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRD-------------QDE------- 99 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~-------------~~~------- 99 (220)
.++++|+|+|+|.+|+++++.++.+|++|++++.++++++.+ +++|++.+ ++..+ .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467899999999999999999999999999999999887766 67998753 22211 011
Q ss_pred HHHhcCCccEEEEcC---CCcc---cHHHHHhccccCCEEEEecCCCC-CcccC--ccccc-cCCcEEEEeec
Q 027668 100 MQAAMGTMDGIIDTV---SAVH---PLMPLIGLLKSQGKLVLLGAPEK-PLELP--AFPLL-TGEKIVGGSLI 162 (220)
Q Consensus 100 ~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~g~iv~~g~~~~-~~~~~--~~~~~-~~~~~i~~~~~ 162 (220)
..+...++|++|+|+ |.+. ..+..++.+++|+.++.++...+ ++... ...+. .+++++.+...
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~n 313 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTD 313 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCC
Confidence 122234899999999 6543 45678999999999998887643 32222 22222 24577777644
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=99.03 E-value=5.2e-09 Score=84.63 Aligned_cols=106 Identities=17% Similarity=0.189 Sum_probs=81.9
Q ss_pred hhhhhhhHhccCC-CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCC
Q 027668 28 ITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGT 106 (220)
Q Consensus 28 ~ta~~~l~~~~~~-~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 106 (220)
..+|.++.+...+ ..|++|+|+|.|.+|+.+++.++.+|++|++++.++.+..++ ...|+. +.+ +.+...+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-~~~G~~-v~~------l~eal~~ 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQA-AMDGFR-VMT------MEEAAEL 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-HhcCCE-ecC------HHHHHhC
Confidence 4456666666333 489999999999999999999999999999999888776555 344654 221 2333458
Q ss_pred ccEEEEcCCCcccHH-HHHhccccCCEEEEecCCCC
Q 027668 107 MDGIIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 107 ~d~vid~~g~~~~~~-~~~~~l~~~g~iv~~g~~~~ 141 (220)
+|++|+|+|..+.+. ..+..+++++.++..|..+.
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 999999999887665 57888999999999998764
No 133
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.02 E-value=4.5e-08 Score=76.33 Aligned_cols=111 Identities=19% Similarity=0.240 Sum_probs=83.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (220)
.+++|+|+|.|.+|+.+++.++.+|++|++++++.++.+.+ +.+|...+. .+.+.+...++|+||+|++......
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~~----~~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPFH----LSELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeeec----HHHHHHHhCCCCEEEECCChhhhhH
Confidence 68999999999999999999999999999999998776555 577866431 2334455568999999987653345
Q ss_pred HHHhccccCCEEEEecCCCCCcccCccccccCCcEEEE
Q 027668 122 PLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGG 159 (220)
Q Consensus 122 ~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~ 159 (220)
..++.+++++.++.++...+..++. ....++++..+
T Consensus 226 ~~l~~~~~g~vIIDla~~pggtd~~--~a~~~Gv~~~~ 261 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKPGGTDFE--YAEKRGIKALL 261 (296)
T ss_pred HHHHcCCCCcEEEEEccCCCCcCee--ehhhCCeEEEE
Confidence 6778899999999998876554442 33345555553
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=99.00 E-value=5.2e-09 Score=80.90 Aligned_cols=169 Identities=17% Similarity=0.197 Sum_probs=99.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHHHH---cCCcEE-ecCCCHHHHHHhcCCccEEEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVER---LGADSF-LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~~~~~~~~d~vid 112 (220)
.+++|++||.+|+|+ |..+.++++..|. +|+.++.+++..+.+.+. ++...+ +...+.+.+....+.||+|+.
T Consensus 74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~ 152 (272)
T PRK11873 74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIIS 152 (272)
T ss_pred cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEE
Confidence 478999999999987 8888888888775 699999998877666432 343222 111111111101137999985
Q ss_pred cC-C-----CcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCcce-e--
Q 027668 113 TV-S-----AVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRA-D-- 183 (220)
Q Consensus 113 ~~-g-----~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 183 (220)
.. . ....+..+.+.|++||+++..+..... +. .....+...+.+..........++.+++.+..+.. .
T Consensus 153 ~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i~ 229 (272)
T PRK11873 153 NCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-EL--PEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITIQ 229 (272)
T ss_pred cCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CC--CHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEEE
Confidence 43 1 123578899999999999998765322 11 11122222222221111123445666666644432 2
Q ss_pred E-EEEecccHHHHHHHH--HcCCcceEEEEE
Q 027668 184 I-EVIPADYVNTAMERL--AKADVRYRFVID 211 (220)
Q Consensus 184 i-~~~~~~~i~~a~~~~--~~~~~~~k~v~~ 211 (220)
. ..+++++..++++.+ .++...++.+..
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 260 (272)
T PRK11873 230 PKREYRIPDAREFLEDWGIAPGRQLDGYIVS 260 (272)
T ss_pred eccceecccHHHHHHHhccccccccCceEEE
Confidence 2 578899999999988 544444444443
No 135
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.98 E-value=4.8e-08 Score=78.45 Aligned_cols=99 Identities=20% Similarity=0.251 Sum_probs=75.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCC---C--
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS---A-- 116 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g---~-- 116 (220)
++.+|+|+|+|.+|+.+++.++.+|++|++++++.++.+.+.+.++........+.+.+.+...++|++|+|++ .
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 34568999999999999999999999999999998887777666775433334445555566678999999983 2
Q ss_pred cc-cHHHHHhccccCCEEEEecCCC
Q 027668 117 VH-PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 117 ~~-~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+. .....++.+++++.++.++...
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d~ 270 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAIDQ 270 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecCC
Confidence 21 1356778899999999988764
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.96 E-value=2.8e-08 Score=80.76 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=79.1
Q ss_pred hhhhHhccC-CCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 027668 31 YSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 31 ~~~l~~~~~-~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (220)
+.++.+... .-.|++++|+|.|.+|+.+++.++.+|++|+++..++.+..++ ...|...+ . +.+.....|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv----~---leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL----T---LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec----c---HHHHHhhCCE
Confidence 444544432 3679999999999999999999999999999998887765554 45566532 1 2233357899
Q ss_pred EEEcCCCcccH-HHHHhccccCCEEEEecCCCC
Q 027668 110 IIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 110 vid~~g~~~~~-~~~~~~l~~~g~iv~~g~~~~ 141 (220)
+|+|.|....+ ...+..+++++.++.+|....
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~ 345 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDN 345 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCCCC
Confidence 99999988754 679999999999999998653
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.86 E-value=4.6e-08 Score=78.79 Aligned_cols=103 Identities=21% Similarity=0.183 Sum_probs=78.5
Q ss_pred hhhhhHhc-cCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 027668 30 VYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 108 (220)
Q Consensus 30 a~~~l~~~-~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 108 (220)
++.++.+. .....|++|+|+|.|.+|+.+++.++.+|++|++++.++.+..++ ...|+. +.+ +.+...+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~------leeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFR-VMT------MEEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCE-eCC------HHHHHhcCC
Confidence 34444444 323689999999999999999999999999999998887765555 455663 221 122335789
Q ss_pred EEEEcCCCcccHHH-HHhccccCCEEEEecCCC
Q 027668 109 GIIDTVSAVHPLMP-LIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 109 ~vid~~g~~~~~~~-~~~~l~~~g~iv~~g~~~ 140 (220)
++|+++|....+.. .+..+++++.++.+|...
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 99999999876764 888999999999998764
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.82 E-value=5.3e-08 Score=76.58 Aligned_cols=108 Identities=20% Similarity=0.274 Sum_probs=78.1
Q ss_pred ceeeCCCCCCcccccccchhhhhhhhhhHhccC---CCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHH
Q 027668 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (220)
Q Consensus 7 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~ 82 (220)
..+++|+.++.+.++... ....++++++.... -.++.+|+|+|+|.+|+.+++.++..|. +|++++++.++.+.+
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 456778888888776443 23444555544332 1478999999999999999999998886 888999988887788
Q ss_pred HHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 83 VERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 83 ~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
++++|.. +.+. +...+....+|+||.|++.+..
T Consensus 219 a~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL---DELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence 7888874 3222 2233334579999999999864
No 139
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.72 E-value=1.9e-08 Score=85.52 Aligned_cols=120 Identities=23% Similarity=0.221 Sum_probs=76.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCc---------------------ccHHHHHHHcCCcEEecCCC-H
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP---------------------SKKSEAVERLGADSFLVSRD-Q 97 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~---------------------~~~~~~~~~~g~~~v~~~~~-~ 97 (220)
.++|++|+|+|+|+.|+++++.++..|++|+++++.+ .+.+.+ +++|++..++... .
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~-~~~Gv~~~~~~~~~~ 212 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRI-LDLGVEVRLGVRVGE 212 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHH-HHCCCEEEeCCEECC
Confidence 5789999999999999999999999999999988532 223333 6789876665432 1
Q ss_pred H-HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEee
Q 027668 98 D-EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSL 161 (220)
Q Consensus 98 ~-~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~ 161 (220)
+ .......++|+||+++|........+.....+|.+..++........+ .....+++.+.|..
T Consensus 213 ~~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~~~~~-~~~~gk~v~ViGgg 276 (564)
T PRK12771 213 DITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGEGE-PPFLGKRVVVIGGG 276 (564)
T ss_pred cCCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHhhccC-CcCCCCCEEEECCh
Confidence 1 122223479999999998754444444455556555544332111111 22334566666643
No 140
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.65 E-value=1.4e-06 Score=67.60 Aligned_cols=99 Identities=19% Similarity=0.313 Sum_probs=74.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (220)
.|++++|+|.|.+|..+++.++.+|++|++..+++++...+ .++|...+ ..+.+.+...++|+||+|++..-.-.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~----~~~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF----PLNKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee----cHHHHHHHhccCCEEEECCChHHhCH
Confidence 57899999999999999999999999999999988766555 45565432 12334445568999999987652224
Q ss_pred HHHhccccCCEEEEecCCCCCccc
Q 027668 122 PLIGLLKSQGKLVLLGAPEKPLEL 145 (220)
Q Consensus 122 ~~~~~l~~~g~iv~~g~~~~~~~~ 145 (220)
..+..++++..++.++...+..++
T Consensus 225 ~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred HHHhcCCCCeEEEEeCcCCCCCCH
Confidence 567778888888888876655444
No 141
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.60 E-value=8.3e-07 Score=72.55 Aligned_cols=95 Identities=17% Similarity=0.227 Sum_probs=75.2
Q ss_pred cCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
+..-.|++++|+|.|.+|..+++.++.+|++|+++.+++.+...+ ...|+..+ .+.+.....|+|+.++|..
T Consensus 249 ~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~~G~~~~-------~leell~~ADIVI~atGt~ 320 (476)
T PTZ00075 249 DVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQA-AMEGYQVV-------TLEDVVETADIFVTATGNK 320 (476)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-HhcCceec-------cHHHHHhcCCEEEECCCcc
Confidence 334589999999999999999999999999999998877665444 33565422 1334445899999999988
Q ss_pred ccHH-HHHhccccCCEEEEecCCC
Q 027668 118 HPLM-PLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 118 ~~~~-~~~~~l~~~g~iv~~g~~~ 140 (220)
+.+. ..+..|++++.++.+|...
T Consensus 321 ~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 321 DIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred cccCHHHHhccCCCcEEEEcCCCc
Confidence 7665 7899999999999998764
No 142
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.60 E-value=1.3e-06 Score=64.89 Aligned_cols=106 Identities=17% Similarity=0.301 Sum_probs=77.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC----cEEecCCCHHHHHH----hc---CCccE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEMQA----AM---GTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~----~~---~~~d~ 109 (220)
+++.++|.|+ +++|.++++.+...|++|+.+.|..++++.++.+++. ...+|-.+.+.+.. +. +.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4578899998 8999999999999999999999999999999999992 34456666544332 22 37999
Q ss_pred EEEcCCCcc-------------------------cHHHHHhcc--ccCCEEEEecCCCCCcccCc
Q 027668 110 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEKPLELPA 147 (220)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l--~~~g~iv~~g~~~~~~~~~~ 147 (220)
.++.+|-.. ..+..+..| ++.|.++.+++..+..+++.
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~ 149 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG 149 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC
Confidence 999988741 111222222 35789999998765544443
No 143
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.48 E-value=3.5e-07 Score=63.00 Aligned_cols=97 Identities=20% Similarity=0.346 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
-++.+++|+|+|++|.+++..+...|+ +++++.|+.++.+.+.+.++.. ......+ ..+....+|+||+|++..
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence 467999999999999999999999999 5999999999988888888532 2333332 223334799999998876
Q ss_pred cc--HHHHHhcccc-CCEEEEecCCC
Q 027668 118 HP--LMPLIGLLKS-QGKLVLLGAPE 140 (220)
Q Consensus 118 ~~--~~~~~~~l~~-~g~iv~~g~~~ 140 (220)
.. ....+....+ -+.++.++.+.
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred CcccCHHHHHHHHhhhhceeccccCC
Confidence 32 1222222222 14666766543
No 144
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.47 E-value=9.2e-07 Score=72.53 Aligned_cols=106 Identities=24% Similarity=0.339 Sum_probs=71.7
Q ss_pred eeCCCCCCcccccccchhhhhhhhhhHhccC---CCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHH
Q 027668 9 VRIPEGAPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (220)
Q Consensus 9 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~ 84 (220)
+++|+.+..+.+. .......+++++..... -.++++|+|+|+|.+|+.+++.++..|+ +++++.++.++.+.+++
T Consensus 146 ~~~~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~ 224 (423)
T PRK00045 146 FSVAKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAE 224 (423)
T ss_pred HHHHhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence 3455555444332 11223333455543321 2578999999999999999999999998 89999999888777778
Q ss_pred HcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 85 RLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 85 ~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
++|.. ++.. +...+...++|+||+|+|.+..
T Consensus 225 ~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 225 EFGGE-AIPL---DELPEALAEADIVISSTGAPHP 255 (423)
T ss_pred HcCCc-EeeH---HHHHHHhccCCEEEECCCCCCc
Confidence 88864 3222 2233334589999999988753
No 145
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.33 E-value=7.3e-06 Score=67.13 Aligned_cols=76 Identities=20% Similarity=0.404 Sum_probs=59.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
..++++|+|+|+|.+|..+++.++..|+ +|+++.++.++.+.+++.+|...+ .. +...+...++|+||+|++.+.
T Consensus 177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-~~---~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-KF---EDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-eH---HHHHHHHhhCCEEEECCCCCC
Confidence 3678999999999999999999999995 899999998877777778886432 22 233344458999999998775
Q ss_pred c
Q 027668 119 P 119 (220)
Q Consensus 119 ~ 119 (220)
.
T Consensus 253 ~ 253 (417)
T TIGR01035 253 P 253 (417)
T ss_pred c
Confidence 4
No 146
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.30 E-value=9.4e-06 Score=64.98 Aligned_cols=97 Identities=25% Similarity=0.273 Sum_probs=74.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHCC-CeEEEEeCCcccHHHHHHHcC--C-cEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLG--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g--~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
.+|||+|+|.+|+.+++.+.+.| .+|++.+++.++..++....+ . ...+|..+.+.+.++..++|+||+|.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 57899999999999999988888 699999999988887744332 2 3456777777787888888999999998754
Q ss_pred HHHHHhccccCCEEEEecCCC
Q 027668 120 LMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 120 ~~~~~~~l~~~g~iv~~g~~~ 140 (220)
....-.+++.|=.++.+....
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCC
Confidence 444445666666666665543
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=98.24 E-value=1.1e-05 Score=70.38 Aligned_cols=99 Identities=22% Similarity=0.325 Sum_probs=70.1
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC-----cEEecCCCHHHHHHh-------cCCcc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-----DSFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~v~~~~~~~~~~~~-------~~~~d 108 (220)
+|+++||.|+ |++|+.+++.+...|++|++++++.++.+.+.+.++. ....|..+.+.+.+. .+++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 6789999996 9999999999999999999999998877666555543 122344554433322 24799
Q ss_pred EEEEcCCCcc-------------------------cHHHHHhcccc---CCEEEEecCCC
Q 027668 109 GIIDTVSAVH-------------------------PLMPLIGLLKS---QGKLVLLGAPE 140 (220)
Q Consensus 109 ~vid~~g~~~-------------------------~~~~~~~~l~~---~g~iv~~g~~~ 140 (220)
++|+++|... .++.+++.+++ +|+++.+++..
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 9999998421 12334555555 68999988754
No 148
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=98.23 E-value=4.8e-05 Score=53.38 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=67.0
Q ss_pred cCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
...-.|++++|.|=|.+|.-.++.++.+|++|++++.++-+.-++. .-|.... .+.+.....|++|.++|..
T Consensus 18 ~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~-------~~~~a~~~adi~vtaTG~~ 89 (162)
T PF00670_consen 18 NLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM-------TLEEALRDADIFVTATGNK 89 (162)
T ss_dssp -S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE--------HHHHTTT-SEEEE-SSSS
T ss_pred ceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec-------CHHHHHhhCCEEEECCCCc
Confidence 4456899999999999999999999999999999999998766663 3355422 2445556889999999998
Q ss_pred ccH-HHHHhccccCCEEEEecCCCCCc
Q 027668 118 HPL-MPLIGLLKSQGKLVLLGAPEKPL 143 (220)
Q Consensus 118 ~~~-~~~~~~l~~~g~iv~~g~~~~~~ 143 (220)
+.+ ..-+..|+++..+..+|..+..+
T Consensus 90 ~vi~~e~~~~mkdgail~n~Gh~d~Ei 116 (162)
T PF00670_consen 90 DVITGEHFRQMKDGAILANAGHFDVEI 116 (162)
T ss_dssp SSB-HHHHHHS-TTEEEEESSSSTTSB
T ss_pred cccCHHHHHHhcCCeEEeccCcCceeE
Confidence 754 46778888888887777655433
No 149
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=1.2e-05 Score=58.59 Aligned_cols=102 Identities=28% Similarity=0.325 Sum_probs=71.8
Q ss_pred hhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHH---HHHcCCcEEe-cCCCHHHHHHh-cCCc
Q 027668 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---VERLGADSFL-VSRDQDEMQAA-MGTM 107 (220)
Q Consensus 33 ~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~---~~~~g~~~v~-~~~~~~~~~~~-~~~~ 107 (220)
+++... ++|+++||-+|+|+ |..++-+++.-| +|+.+.+.++=.+.+ .+.+|...|. ...| ...-.- ...|
T Consensus 64 m~~~L~-~~~g~~VLEIGtGs-GY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD-G~~G~~~~aPy 139 (209)
T COG2518 64 MLQLLE-LKPGDRVLEIGTGS-GYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGD-GSKGWPEEAPY 139 (209)
T ss_pred HHHHhC-CCCCCeEEEECCCc-hHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC-cccCCCCCCCc
Confidence 344444 79999999999985 999999999888 999999987733333 3466763332 2222 111011 1279
Q ss_pred cEEEEcCCCcccHHHHHhccccCCEEEEecC
Q 027668 108 DGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 108 d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~ 138 (220)
|.++-+++.+..-+..++.|++||+++..-.
T Consensus 140 D~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 140 DRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 9999888887666889999999999987644
No 150
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.20 E-value=1.3e-05 Score=61.38 Aligned_cols=98 Identities=18% Similarity=0.230 Sum_probs=78.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc-----
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH----- 118 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~----- 118 (220)
.+|.|+|+|.+|.-++++|..+|++|++.+.+.+|++++...|+.....-++....+++...+.|++|.++--+.
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaPk 248 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPK 248 (371)
T ss_pred ccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCce
Confidence 467788999999999999999999999999999999888777776533446666677776678999998763221
Q ss_pred -cHHHHHhccccCCEEEEecCCCC
Q 027668 119 -PLMPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 119 -~~~~~~~~l~~~g~iv~~g~~~~ 141 (220)
..+..++.|+||+.++.+....+
T Consensus 249 Lvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 249 LVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred ehhHHHHHhcCCCcEEEEEEEcCC
Confidence 25677899999999998876553
No 151
>PRK12742 oxidoreductase; Provisional
Probab=98.20 E-value=3.5e-05 Score=58.13 Aligned_cols=99 Identities=19% Similarity=0.283 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeC-CcccHHHHHHHcCCcEE-ecCCCHHHHHHhc---CCccEEEEcCC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERLGADSF-LVSRDQDEMQAAM---GTMDGIIDTVS 115 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~---~~~d~vid~~g 115 (220)
+++++||.|+ |.+|..+++.+...|++|+++.+ ++++.+++.++++...+ .|..+.+.+.+.. +++|++|+++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4689999997 99999999999999999887765 34445555455665433 3444544443332 36999999987
Q ss_pred Cccc-------------------------HHHHHhccccCCEEEEecCCC
Q 027668 116 AVHP-------------------------LMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 116 ~~~~-------------------------~~~~~~~l~~~g~iv~~g~~~ 140 (220)
.... ...+...++++|+++.++...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 6310 023334456678999887654
No 152
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.19 E-value=2.1e-05 Score=59.85 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=59.5
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE-----E--ecCCCHHHHHHh----c---C
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----F--LVSRDQDEMQAA----M---G 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-----v--~~~~~~~~~~~~----~---~ 105 (220)
..+.++||.|+ +++|...+..+...|.+++.+.|+.++++++.+++.-.+ + .|..+.+.+..+ . .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 56789999998 999999999999999999999999999988877765211 2 244444333322 1 2
Q ss_pred CccEEEEcCCCc
Q 027668 106 TMDGIIDTVSAV 117 (220)
Q Consensus 106 ~~d~vid~~g~~ 117 (220)
.+|+.|+++|..
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 699999999885
No 153
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.19 E-value=8.8e-06 Score=58.76 Aligned_cols=76 Identities=16% Similarity=0.190 Sum_probs=58.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC--cEEecCCCHHHHHH----hc---CCccEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DSFLVSRDQDEMQA----AM---GTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~----~~---~~~d~vi 111 (220)
.|.+|||.|+ +++|+.+++-....|-+||+.+|++++++++...... ..+.|-.+.+..++ +. ...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4789999985 8999999999999999999999999999998655542 44555555543332 22 2789999
Q ss_pred EcCCCc
Q 027668 112 DTVSAV 117 (220)
Q Consensus 112 d~~g~~ 117 (220)
+++|-.
T Consensus 84 NNAGIq 89 (245)
T COG3967 84 NNAGIQ 89 (245)
T ss_pred eccccc
Confidence 998863
No 154
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.19 E-value=1.7e-05 Score=57.39 Aligned_cols=92 Identities=26% Similarity=0.320 Sum_probs=67.8
Q ss_pred EEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc----c
Q 027668 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH----P 119 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~----~ 119 (220)
|+|.|+ |.+|..+++.+...|.+|+++++++++.+. ..+.+.+ .|..+.+.+.+...++|.||.++|... .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689998 999999999999999999999999887655 3444433 355667777777789999999998532 2
Q ss_pred HHHHHhccccCC--EEEEecCCC
Q 027668 120 LMPLIGLLKSQG--KLVLLGAPE 140 (220)
Q Consensus 120 ~~~~~~~l~~~g--~iv~~g~~~ 140 (220)
....++.++..| +++.++...
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccceeeeccc
Confidence 344555554443 777766543
No 155
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=98.16 E-value=8.3e-05 Score=60.04 Aligned_cols=74 Identities=28% Similarity=0.460 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
-.+.++||+|+|-+|..++..+...|. ++++..|+.++.+++++++|+..+ ..+.+......+|+||-|+|.+.
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~----~l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV----ALEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee----cHHHHHHhhhhCCEEEEecCCCc
Confidence 477899999999999999999999997 999999999999999999996544 22334444568999999998875
No 156
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.14 E-value=4e-05 Score=64.43 Aligned_cols=78 Identities=21% Similarity=0.233 Sum_probs=59.0
Q ss_pred CCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc--------C------CcE-EecCCCHHHHHHh
Q 027668 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--------G------ADS-FLVSRDQDEMQAA 103 (220)
Q Consensus 40 ~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~--------g------~~~-v~~~~~~~~~~~~ 103 (220)
.+.|++|||.|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ | ... ..|..+.+.+.+.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 468899999997 99999999999999999999999887765543321 2 111 2355556667666
Q ss_pred cCCccEEEEcCCCc
Q 027668 104 MGTMDGIIDTVSAV 117 (220)
Q Consensus 104 ~~~~d~vid~~g~~ 117 (220)
.+++|+||.++|..
T Consensus 157 LggiDiVVn~AG~~ 170 (576)
T PLN03209 157 LGNASVVICCIGAS 170 (576)
T ss_pred hcCCCEEEEccccc
Confidence 67999999998864
No 157
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=98.14 E-value=6.4e-05 Score=53.60 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=69.9
Q ss_pred ccccchhhhhhhhhhHhccCCCCCCEEEEEcCch-HHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHH
Q 027668 20 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98 (220)
Q Consensus 20 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 98 (220)
....++...++...++....--.|.+|+|+|+|. +|..++..++..|++|+++.+..+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~--------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK--------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence 4456666666666666665446889999999986 599999999999999888887632
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
.+.+....+|+||.+++.++.+.. +.++++-.++.++.+.
T Consensus 80 ~l~~~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 80 NLKEHTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred hHHHHHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 122333578999999999764433 2466666677777654
No 158
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=98.13 E-value=2.7e-05 Score=51.61 Aligned_cols=93 Identities=27% Similarity=0.344 Sum_probs=64.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHH-HCCCeEEEEeCCcccHHHHHHHc---C--Cc-EEecCCCHHHHHHhcCCccEEEEcC
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERL---G--AD-SFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~~---g--~~-~v~~~~~~~~~~~~~~~~d~vid~~ 114 (220)
|+.+||-+|+|. |..++.+++ ..|++++.++.+++..+.+.+.+ + .. .++..+- .......++||+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-EFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-HGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-ccCcccCCCCCEEEECC
Confidence 688999999875 788888888 57889999999998877776655 2 12 2222222 22222334899999877
Q ss_pred -CCc---c------cHHHHHhccccCCEEEEe
Q 027668 115 -SAV---H------PLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 115 -g~~---~------~~~~~~~~l~~~g~iv~~ 136 (220)
... + .++.+.+.|+++|+++..
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1 256788899999999864
No 159
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.13 E-value=1.5e-05 Score=57.60 Aligned_cols=122 Identities=18% Similarity=0.311 Sum_probs=82.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (220)
-.|.+|.|+|.|.+|+.+++.++.+|++|++.+++....... ...+... .+ +.++....|+|+.+....+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~~----~~---l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVEY----VS---LDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEEE----SS---HHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-cccccee----ee---hhhhcchhhhhhhhhcccccc
Confidence 468999999999999999999999999999999998654423 3444421 12 3333446899998876422
Q ss_pred --cH-HHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCcceeE-EEEecccHHH
Q 027668 119 --PL-MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRADI-EVIPADYVNT 194 (220)
Q Consensus 119 --~~-~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~ 194 (220)
.+ ...+..++++..+|.++...- -+-+.+++.+++|.+.-.. +++.-|..+.
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG~~------------------------vde~aL~~aL~~g~i~ga~lDV~~~EP~~~ 161 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARGEL------------------------VDEDALLDALESGKIAGAALDVFEPEPLPA 161 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSGGG------------------------B-HHHHHHHHHTTSEEEEEESS-SSSSSST
T ss_pred ceeeeeeeeeccccceEEEeccchhh------------------------hhhhHHHHHHhhccCceEEEECCCCCCCCC
Confidence 12 357888999998888765221 1355788888899888554 7776665543
No 160
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=98.11 E-value=0.00019 Score=53.03 Aligned_cols=115 Identities=16% Similarity=0.100 Sum_probs=73.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (220)
.|.+|||+|+|.+|..-++.+...|++|++++.... ....+. +.|.-..+. .+.+ .....++++||-+++....-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-RCFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence 468999999999999999999999999999887653 233332 233211222 2211 12235899999999997544
Q ss_pred HHHHhccccCCEEEEecCCCCCcccCccccc-cCCcEEEEe
Q 027668 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFPLL-TGEKIVGGS 160 (220)
Q Consensus 121 ~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~-~~~~~i~~~ 160 (220)
.......+..|..+.........+|-.+..+ ...+++.-+
T Consensus 84 ~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred HHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEE
Confidence 4566666677888876554444444444333 345666444
No 161
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.10 E-value=4.6e-05 Score=55.46 Aligned_cols=100 Identities=18% Similarity=0.212 Sum_probs=72.5
Q ss_pred CCCEEEEEcC--chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC-cEEecCCCHHHHHHh-------c-CCccEE
Q 027668 42 PGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAA-------M-GTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~--g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~-------~-~~~d~v 110 (220)
..+.|||.|+ |++|.+++.-....|+.|+++.+.-++...+..++|. .+-+|-.+++.+.+. . +..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 4478999984 9999999999999999999999999998888778885 334555555444322 2 378999
Q ss_pred EEcCCCcc----------------------c--HHHHH--hccccCCEEEEecCCCC
Q 027668 111 IDTVSAVH----------------------P--LMPLI--GLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 111 id~~g~~~----------------------~--~~~~~--~~l~~~g~iv~~g~~~~ 141 (220)
++.+|.+= . +..++ ..++..|+||.+|+..+
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 99888741 0 11111 23577899999987653
No 162
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.09 E-value=6.2e-05 Score=56.78 Aligned_cols=99 Identities=21% Similarity=0.341 Sum_probs=67.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC---CcEE--ecCCCHHHHHHh-------cCCcc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---ADSF--LVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~~v--~~~~~~~~~~~~-------~~~~d 108 (220)
++++|+|.|+ |.+|..+++.+...|++|+.+++++++.+.+.+.+. .... .|-.+.+.+.+. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999997 999999999999999999999999877655533332 2122 233444333222 24689
Q ss_pred EEEEcCCCcc-----------------------cHHHHHhccccCCEEEEecCCC
Q 027668 109 GIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 109 ~vid~~g~~~-----------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
.++.++|... .++..+++++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999887531 1334455667789999887754
No 163
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.08 E-value=0.00011 Score=53.92 Aligned_cols=78 Identities=21% Similarity=0.257 Sum_probs=57.3
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc----CCcE-EecCCCHHHHHHhcCCccEEEEcC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS-FLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~~~~~d~vid~~ 114 (220)
-++.+++|+|+ |.+|..++..+...|++|+++.++.++.+.+.+.+ +... ..+..+.+...+...++|+||.++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 36789999997 99999999988889999999999888776665544 3321 223344455555556899999988
Q ss_pred CCcc
Q 027668 115 SAVH 118 (220)
Q Consensus 115 g~~~ 118 (220)
+...
T Consensus 106 ~~g~ 109 (194)
T cd01078 106 AAGV 109 (194)
T ss_pred CCCc
Confidence 7664
No 164
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=98.08 E-value=8.1e-05 Score=54.77 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=66.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCC--CeEEEEeCCcccHHHHH---HHcC-CcE--EecCCCHHHHHHhcCCccEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAV---ERLG-ADS--FLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~---~~~g-~~~--v~~~~~~~~~~~~~~~~d~v 110 (220)
.+.++++|+.+|+|+ |..++.+++..+ .+|+.++.+++..+.+. +.+| .+. ++..+..+.+....+.+|.|
T Consensus 37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V 115 (198)
T PRK00377 37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI 115 (198)
T ss_pred CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence 378999999999987 888888888764 48999999987665442 3455 222 22222223333333589999
Q ss_pred EEcCCCc---ccHHHHHhccccCCEEEE
Q 027668 111 IDTVSAV---HPLMPLIGLLKSQGKLVL 135 (220)
Q Consensus 111 id~~g~~---~~~~~~~~~l~~~g~iv~ 135 (220)
|...+.. ..+..+.+.|+++|+++.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 9865432 246677888999999985
No 165
>PRK06182 short chain dehydrogenase; Validated
Probab=98.07 E-value=9.7e-05 Score=57.05 Aligned_cols=75 Identities=21% Similarity=0.261 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vid 112 (220)
++++++|.|+ |.+|..+++.+...|++|++++++.++.+.+. ..+... ..|-.+.+.+.+. .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4578999997 99999999999999999999999887665552 334433 2355555444322 248999999
Q ss_pred cCCCc
Q 027668 113 TVSAV 117 (220)
Q Consensus 113 ~~g~~ 117 (220)
++|..
T Consensus 81 ~ag~~ 85 (273)
T PRK06182 81 NAGYG 85 (273)
T ss_pred CCCcC
Confidence 99853
No 166
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.04 E-value=7.1e-05 Score=61.12 Aligned_cols=76 Identities=16% Similarity=0.216 Sum_probs=59.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
-.+.+|+|+|+|.+|.+++..+...|+ +++++.++.++.+.+.++++...+... +...+....+|+||+|++.++.
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCCe
Confidence 467899999999999999999999997 899999998888888777762222222 2333445679999999999864
No 167
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.04 E-value=8.2e-05 Score=57.13 Aligned_cols=107 Identities=18% Similarity=0.320 Sum_probs=74.2
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCcE-E----ecCCCHHHHHH-------hcC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADS-F----LVSRDQDEMQA-------AMG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~-v----~~~~~~~~~~~-------~~~ 105 (220)
.|+.|+|.|| +++|.+++.-+-..|++++.+.+..++++...+ +.+... + .|-.+.+.+++ ..+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 5688999998 899999999999999999999988887666533 333221 1 23334444432 235
Q ss_pred CccEEEEcCCCcc-------------------------cHHHHHhccccC--CEEEEecCCCCCcccCcc
Q 027668 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQ--GKLVLLGAPEKPLELPAF 148 (220)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~--g~iv~~g~~~~~~~~~~~ 148 (220)
++|+.++.+|-.. ..+.++..|++. |+|+.+++..+-..++..
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcc
Confidence 8999999988742 234566666543 999999988765555543
No 168
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.03 E-value=0.00014 Score=56.28 Aligned_cols=74 Identities=16% Similarity=0.273 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHHHHHHh-------c-CCccEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-------M-GTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~-~~~d~vi 111 (220)
.+++++|.|+ |.+|..+++.+...|++|+++++++++.+.+ ...+...+ .|..+.+.+.+. . +.+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL-EAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999997 9999999999999999999999998776665 34455433 355554433221 1 3689999
Q ss_pred EcCCC
Q 027668 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
+++|.
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 99874
No 169
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=98.03 E-value=0.00013 Score=52.24 Aligned_cols=97 Identities=21% Similarity=0.253 Sum_probs=67.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHC-CCeEEEEeCCcccHHHH---HHHcCCc--EEecCCCHHHHHHhcCCccEEEEc
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEA---VERLGAD--SFLVSRDQDEMQAAMGTMDGIIDT 113 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~---~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~ 113 (220)
++||+.++=+|+|+ |..+++++... ..+|+++++++++.+.. +++||.+ .++..+.++.+.... .+|.+|--
T Consensus 32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG 109 (187)
T COG2242 32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG 109 (187)
T ss_pred CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence 68999888889864 77777888433 33999999998865443 4577865 344455555554332 69999965
Q ss_pred CCCc--ccHHHHHhccccCCEEEEecC
Q 027668 114 VSAV--HPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 114 ~g~~--~~~~~~~~~l~~~g~iv~~g~ 138 (220)
-|.. ..++.+|..|+++|++|.-..
T Consensus 110 Gg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 110 GGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred CCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 5432 347789999999999997544
No 170
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.03 E-value=0.00015 Score=55.67 Aligned_cols=75 Identities=17% Similarity=0.253 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc--E-EecCCCHHHHHHh-------cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--S-FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~-v~~~~~~~~~~~~-------~~~~d~v 110 (220)
.+++++|.|+ |.+|..+++.+...|++|++++++.++.+++.++++.. . ..|-.+.+.+.+. .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999997 99999999999999999999999887777776666532 1 2344454433322 2478999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|.++|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999875
No 171
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.01 E-value=0.00014 Score=57.87 Aligned_cols=76 Identities=21% Similarity=0.314 Sum_probs=56.3
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADS---FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~~ 106 (220)
.+++++||.|+ |++|..+++.+...|++|+++++++++.+++.+ +.|.+. ..|-.+.+.++++ .++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 35689999997 999999999999999999999999887665544 335432 2355555544433 257
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|+++|.
T Consensus 85 iD~lVnnAG~ 94 (330)
T PRK06139 85 IDVWVNNVGV 94 (330)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 172
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=98.01 E-value=5.5e-05 Score=58.76 Aligned_cols=76 Identities=26% Similarity=0.268 Sum_probs=55.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
++++++|+|+|+.|.+++..+...|+ +++++.|+.++.+.++++++... +......+........+|+||+|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57899999999999999999999998 89999999988888877765321 111111122223335799999998765
No 173
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.99 E-value=0.00022 Score=55.12 Aligned_cols=72 Identities=19% Similarity=0.231 Sum_probs=52.8
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHHHHHHh-------cCCccEEEEcC
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-------MGTMDGIIDTV 114 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~vid~~ 114 (220)
+++||.|+ |.+|..+++.+...|++|++++++.++.+.+ ...+...+ .|..+.+.+.+. .+++|++|+++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899997 9999999999999999999999987766555 34454433 455555444322 24799999999
Q ss_pred CC
Q 027668 115 SA 116 (220)
Q Consensus 115 g~ 116 (220)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 85
No 174
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.96 E-value=6.7e-05 Score=57.88 Aligned_cols=86 Identities=20% Similarity=0.326 Sum_probs=60.6
Q ss_pred hhhhhhhHhcc--CCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCcE----EecCCCHHHH
Q 027668 28 ITVYSPLRFYG--LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADS----FLVSRDQDEM 100 (220)
Q Consensus 28 ~ta~~~l~~~~--~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~----v~~~~~~~~~ 100 (220)
...+.+|.... ...+|++++|+|+|+.+.+++.-++..|+ +++++.|+.++.+++++.++... .....+.+..
T Consensus 109 ~G~~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~ 188 (283)
T COG0169 109 IGFLRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGL 188 (283)
T ss_pred HHHHHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccc
Confidence 33344555432 23468999999999999999999999997 89999999999888887777422 1111111110
Q ss_pred HHhcCCccEEEEcCCCc
Q 027668 101 QAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~ 117 (220)
..+|++|+|++..
T Consensus 189 ----~~~dliINaTp~G 201 (283)
T COG0169 189 ----EEADLLINATPVG 201 (283)
T ss_pred ----cccCEEEECCCCC
Confidence 0489999998664
No 175
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.95 E-value=0.00022 Score=54.11 Aligned_cols=75 Identities=20% Similarity=0.325 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE---ecCCCHHHHH-------HhcCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQ-------AAMGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~-------~~~~~~d~v 110 (220)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.++++.... .|..+.+.+. +..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999997 9999999999999999999999987766666566664321 2333333222 222478999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|.++|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999875
No 176
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.94 E-value=0.00031 Score=56.95 Aligned_cols=113 Identities=25% Similarity=0.206 Sum_probs=73.1
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-CcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~ 100 (220)
.+..+....+..+.....+++|++||.+|+| .|..+..+++..|++|+.++.+++..+.+.+... ...-+...+ .
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D---~ 222 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQD---Y 222 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---h
Confidence 3444444445444344447899999999997 4777888888889999999999887777654432 111111111 1
Q ss_pred HHhcCCccEEEEc-----CCCc---ccHHHHHhccccCCEEEEecC
Q 027668 101 QAAMGTMDGIIDT-----VSAV---HPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 101 ~~~~~~~d~vid~-----~g~~---~~~~~~~~~l~~~g~iv~~g~ 138 (220)
....+.||.|+.. +|.. ..++.+.+.|+|+|.+++...
T Consensus 223 ~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i 268 (383)
T PRK11705 223 RDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI 268 (383)
T ss_pred hhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 1223479988743 3331 246678889999999987643
No 177
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.93 E-value=0.00028 Score=54.24 Aligned_cols=75 Identities=15% Similarity=0.228 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc----CCc---EEecCCCHHHHHHh------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD---SFLVSRDQDEMQAA------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~------~~~~ 107 (220)
.++++||.|+ |++|.++++.+...|++|++++++.++.+.+.+++ +.. ...|-.+.+.++++ .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999997 89999999999999999999999877766554433 321 12344444433322 1479
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++++++|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999875
No 178
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.93 E-value=0.00018 Score=50.63 Aligned_cols=105 Identities=22% Similarity=0.272 Sum_probs=67.6
Q ss_pred hhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCC-CeEEEEeCCcccHHHHHHHcCCcE-EecCCCHHHHHHhcCCccE
Q 027668 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 32 ~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~ 109 (220)
.++.....-.++.+++|+|+|.+|...++.+...| .++++++++.++.+.+.++++... .....+ ..+..+++|+
T Consensus 8 ~a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 84 (155)
T cd01065 8 RALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADL 84 (155)
T ss_pred HHHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCE
Confidence 34444332145688999999999999999988886 589999998887777767766431 011111 1222458999
Q ss_pred EEEcCCCccc----HHHHHhccccCCEEEEecCC
Q 027668 110 IIDTVSAVHP----LMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 110 vid~~g~~~~----~~~~~~~l~~~g~iv~~g~~ 139 (220)
||.|++.... .......++++..++.++..
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9999987632 11122345666666666543
No 179
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.93 E-value=0.0001 Score=56.29 Aligned_cols=128 Identities=23% Similarity=0.268 Sum_probs=74.4
Q ss_pred cCcceeeCCCCCCcccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHH
Q 027668 4 DEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (220)
Q Consensus 4 ~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~ 82 (220)
+...++++++++++..+. .+.+. .....+... +.++++||-+|+|+ |..++.+++ .|+ +|+.++.++...+.+
T Consensus 85 ~~~~~i~i~p~~afgtg~-h~tt~-~~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A 158 (250)
T PRK00517 85 PDEINIELDPGMAFGTGT-HPTTR-LCLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAA 158 (250)
T ss_pred CCeEEEEECCCCccCCCC-CHHHH-HHHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHH
Confidence 345566777777665543 11111 112223222 46889999999987 877776554 677 699999998877666
Q ss_pred HHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc---ccHHHHHhccccCCEEEEecCCC
Q 027668 83 VERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 83 ~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
.+.+....+ . .... +..-...||+|+-..... ..+..+.+.|+++|.+++.|...
T Consensus 159 ~~n~~~~~~-~-~~~~-~~~~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~ 216 (250)
T PRK00517 159 RENAELNGV-E-LNVY-LPQGDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE 216 (250)
T ss_pred HHHHHHcCC-C-ceEE-EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence 443321111 0 0000 000001589998655433 12456788899999999976543
No 180
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.92 E-value=0.00019 Score=55.39 Aligned_cols=96 Identities=17% Similarity=0.284 Sum_probs=71.9
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcCch-HHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
.++|+..+....++...---.|++|+|+|.|. +|.-++.++...|+.|++..+... .+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l 195 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM 195 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence 46776666666676654335789999999854 999999999999999998876421 12
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
.+....+|+||.++|.+..+.. +.++++..++.+|...
T Consensus 196 ~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 196 ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 3344578999999999875554 4578888888888754
No 181
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.92 E-value=0.00033 Score=54.05 Aligned_cols=75 Identities=21% Similarity=0.352 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-CcE-EecCCCHHHHH-------HhcCCccEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADS-FLVSRDQDEMQ-------AAMGTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~-------~~~~~~d~vi 111 (220)
.+.++||.|+ |++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|-.+.+.+. +..+++|++|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3578999997 999999999988999999999998887766655555 322 23555544332 2234799999
Q ss_pred EcCCC
Q 027668 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
.++|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99885
No 182
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.00017 Score=55.45 Aligned_cols=76 Identities=29% Similarity=0.354 Sum_probs=52.8
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~ 106 (220)
.++++++|.|+ |.+|..+++.+...|++|+++++++++.+...+++ +... ..|..+.+.+.+. .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999997 99999999999999999999998876554443332 2221 2344454444332 236
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 87 iD~vi~~ag~ 96 (264)
T PRK07576 87 IDVLVSGAAG 96 (264)
T ss_pred CCEEEECCCC
Confidence 8999998863
No 183
>PRK06484 short chain dehydrogenase; Validated
Probab=97.90 E-value=0.00026 Score=59.85 Aligned_cols=99 Identities=19% Similarity=0.283 Sum_probs=70.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (220)
.++++||.|+ |++|..+++.+...|++|++++++.++.+.+.++++... ..|-.+.+.++++ .+.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999997 999999999999999999999998887777766666432 2344454433322 2479999
Q ss_pred EEcCCCcc--------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 111 IDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 111 id~~g~~~--------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
|.++|... ..+.++..++.+|+++.+++..
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 99987531 1233345556679999887654
No 184
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.90 E-value=0.00017 Score=56.25 Aligned_cols=76 Identities=14% Similarity=0.318 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCc---ccHHHHHHHcCC---c---EEecCCCHHHHHHhcCCccEE
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---SKKSEAVERLGA---D---SFLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~---~~~~~~~~~~g~---~---~v~~~~~~~~~~~~~~~~d~v 110 (220)
..+++++|+|+|++|.+++..+...|+ +|+++.++. ++.+++.+++.. . ...+..+.+.+.+....+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 357899999999999999998889999 599999986 455555454421 1 122333333444444578999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|+|+.-
T Consensus 204 INaTp~ 209 (289)
T PRK12548 204 VNATLV 209 (289)
T ss_pred EEeCCC
Confidence 998854
No 185
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.89 E-value=0.00029 Score=56.16 Aligned_cols=75 Identities=19% Similarity=0.305 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+++.+ ..|... ..|..+.+.+++. .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999997 999999999999999999999998876655433 334332 2355555444332 2479
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|+++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999985
No 186
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.89 E-value=4.7e-05 Score=63.46 Aligned_cols=77 Identities=22% Similarity=0.393 Sum_probs=55.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc--------------------cHHHHHHHcCCcEEecCCC-HH-H
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAVERLGADSFLVSRD-QD-E 99 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~--------------------~~~~~~~~~g~~~v~~~~~-~~-~ 99 (220)
++++|+|+|+|+.|+.++..++..|.+|++..+.+. +..+..+++|++..++..- .+ .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 219 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDIS 219 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCccC
Confidence 578999999999999999999999999998887642 1223346788765544321 11 1
Q ss_pred HHHhcCCccEEEEcCCCcc
Q 027668 100 MQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~ 118 (220)
+.....++|.||.++|...
T Consensus 220 ~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 220 LDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred HHHHHhcCCEEEEEeCCCC
Confidence 2223347999999999864
No 187
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.89 E-value=0.00012 Score=59.68 Aligned_cols=91 Identities=19% Similarity=0.245 Sum_probs=64.5
Q ss_pred EEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHHHHc-C--C-cEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 46 VGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL-G--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 46 vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~~-g--~-~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
|+|+|+|.+|..+++.+...+. ++++.+++.++.+.+.+++ + . ...+|..+.+.+.++..+.|+||+|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 6899999999999999887764 8999999999877776542 2 2 2345666777788888889999999998743
Q ss_pred HHHHHhccccCCEEEEe
Q 027668 120 LMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 120 ~~~~~~~l~~~g~iv~~ 136 (220)
...+-.+++.+-.++..
T Consensus 81 ~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDT 97 (386)
T ss_dssp HHHHHHHHHHT-EEEES
T ss_pred HHHHHHHHHhCCCeecc
Confidence 44455567778888873
No 188
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00017 Score=54.61 Aligned_cols=76 Identities=21% Similarity=0.381 Sum_probs=57.6
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHHHHHHhc---CCccEEEEcCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAM---GTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~---~~~d~vid~~g 115 (220)
.++++++|.|+ |.+|..+++.+...|++|++++++.++.+++.+..+...+ .|..+.+.+.+.. +++|++|.++|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 35689999997 8999999999999999999999988777666555565432 3555555444433 36899999997
Q ss_pred C
Q 027668 116 A 116 (220)
Q Consensus 116 ~ 116 (220)
.
T Consensus 87 ~ 87 (245)
T PRK07060 87 I 87 (245)
T ss_pred C
Confidence 5
No 189
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.85 E-value=0.00013 Score=56.63 Aligned_cols=110 Identities=23% Similarity=0.294 Sum_probs=68.3
Q ss_pred hhhhhhhhhhHh-ccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHH
Q 027668 25 CAGITVYSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA 102 (220)
Q Consensus 25 ~~~~ta~~~l~~-~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 102 (220)
.-+.....++.. ...-..+.+++|+|+|.+|.+++..+...|+ +|+++.++.++.+.+.++++....+.. +. ...+
T Consensus 104 TD~~G~~~~l~~~~~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~ 181 (278)
T PRK00258 104 TDGIGFVRALEERLGVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQE 181 (278)
T ss_pred ccHHHHHHHHHhccCCCCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchh
Confidence 333444445543 2222456889999999999999999999995 999999998887777666653210111 00 1112
Q ss_pred hcCCccEEEEcCCCcccH-----HHHHhccccCCEEEEe
Q 027668 103 AMGTMDGIIDTVSAVHPL-----MPLIGLLKSQGKLVLL 136 (220)
Q Consensus 103 ~~~~~d~vid~~g~~~~~-----~~~~~~l~~~g~iv~~ 136 (220)
...++|+||+|++....- ......++++..++.+
T Consensus 182 ~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~Di 220 (278)
T PRK00258 182 ELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDM 220 (278)
T ss_pred ccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence 235799999998764210 1123445555555544
No 190
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00044 Score=53.11 Aligned_cols=76 Identities=18% Similarity=0.248 Sum_probs=53.9
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc-E--EecCCCHHHHHHh-------cCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~ 106 (220)
.++.++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+.+.+. .++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999997 89999999999999999999999877655544332 321 1 2344555444322 247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 88 id~vi~~Ag~ 97 (263)
T PRK07814 88 LDIVVNNVGG 97 (263)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 191
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00032 Score=53.27 Aligned_cols=76 Identities=21% Similarity=0.278 Sum_probs=53.7
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc---EEecCCCHHHHHHhc-------CC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAAM-------GT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~~-------~~ 106 (220)
.++++++|.|+ |.+|+.++..+...|++++++++++++.+...+++ +.. ...|-.+.+.+.++. ++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999997 99999999999999999999988877655443332 322 122444544433222 47
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999986
No 192
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.84 E-value=0.00092 Score=49.31 Aligned_cols=115 Identities=14% Similarity=0.066 Sum_probs=68.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
-.|.+|||+|+|.+|...++.+...|++|+++.+... ....+.+. +. ..+.....+ .....++|+||-|++.+.
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~~~--~~~l~~adlViaaT~d~e- 82 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GK-IRWKQKEFE--PSDIVDAFLVIAATNDPR- 82 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CC-EEEEecCCC--hhhcCCceEEEEcCCCHH-
Confidence 3578999999999999999999999999998876432 22233222 21 112121111 112348999999999985
Q ss_pred HHHHHhccccCCEEEEecCCCCCcccCccccc-cCCcEEEEe
Q 027668 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL-TGEKIVGGS 160 (220)
Q Consensus 120 ~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~-~~~~~i~~~ 160 (220)
++..+......+.++.........+|-.+..+ ...+++.-+
T Consensus 83 lN~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 83 VNEQVKEDLPENALFNVITDAESGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred HHHHHHHHHHhCCcEEECCCCccCeEEEeeEEEcCCeEEEEE
Confidence 55544444445667666554444444444333 345665544
No 193
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.84 E-value=0.00041 Score=52.66 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC--C--c-EEecCCCHHHHHHh-------cCCcc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--A--D-SFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~--~-~v~~~~~~~~~~~~-------~~~~d 108 (220)
++.++||.|+ |.+|..+++.+...|++|+++++++++.+.+...+. . . ...|..+.+.+... .+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999997 999999999999999999999999877665544433 1 1 12244444444322 23789
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
++|.++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999876
No 194
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00031 Score=52.96 Aligned_cols=75 Identities=24% Similarity=0.323 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC----CcEE-ecCCCHHHHHHh-------cCCcc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADSF-LVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~~v-~~~~~~~~~~~~-------~~~~d 108 (220)
++.+++|.|+ |.+|..+++.+...|++|+++++++++.+++.+++. ...+ .|..+.+.+.+. .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999997 999999999888899999999998876666555443 1211 244444333221 23799
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999875
No 195
>PRK06196 oxidoreductase; Provisional
Probab=97.83 E-value=0.00049 Score=54.39 Aligned_cols=75 Identities=23% Similarity=0.303 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-CcE-EecCCCHHHHHHhc-------CCccEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADS-FLVSRDQDEMQAAM-------GTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~~-------~~~d~vi 111 (220)
.+.+++|.|+ |.+|..+++.+...|++|++++++.++.+++.+++. ... ..|-.+.+.++++. +++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5689999997 999999999999999999999998877666544443 221 23445554443322 4799999
Q ss_pred EcCCC
Q 027668 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
.++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99874
No 196
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.83 E-value=0.0001 Score=57.25 Aligned_cols=86 Identities=20% Similarity=0.317 Sum_probs=58.1
Q ss_pred hhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCC----cEEecCCCHHHHHH
Q 027668 28 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEMQA 102 (220)
Q Consensus 28 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~ 102 (220)
...+.+++....-..+.+|+|+|+|++|.+++..+...|+ ++++++++.++.+.+++.++. ..+.... ...+
T Consensus 112 ~G~~~~l~~~~~~~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~ 188 (284)
T PRK12549 112 SGFAESFRRGLPDASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAA 188 (284)
T ss_pred HHHHHHHHhhccCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHh
Confidence 3334445432212456899999999999999999999998 899999998888777666531 1222211 1222
Q ss_pred hcCCccEEEEcCCC
Q 027668 103 AMGTMDGIIDTVSA 116 (220)
Q Consensus 103 ~~~~~d~vid~~g~ 116 (220)
....+|+||+|+..
T Consensus 189 ~~~~aDiVInaTp~ 202 (284)
T PRK12549 189 ALAAADGLVHATPT 202 (284)
T ss_pred hhCCCCEEEECCcC
Confidence 33579999999643
No 197
>PRK06484 short chain dehydrogenase; Validated
Probab=97.83 E-value=0.00046 Score=58.40 Aligned_cols=76 Identities=22% Similarity=0.377 Sum_probs=57.8
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccE
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~ 109 (220)
.+++++||.|+ +++|.++++.+...|++|++++++.++.+.+.++++.. ...|..+.+.++++ .+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 35789999997 89999999999999999999999988877776777643 22455555443322 247999
Q ss_pred EEEcCCC
Q 027668 110 IIDTVSA 116 (220)
Q Consensus 110 vid~~g~ 116 (220)
+|+++|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999875
No 198
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00015 Score=56.76 Aligned_cols=75 Identities=24% Similarity=0.349 Sum_probs=57.1
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC--cEE---ecCCCHHHHHHh-------cCCcc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DSF---LVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~~v---~~~~~~~~~~~~-------~~~~d 108 (220)
+++++||.|+ |++|..+++.+...|++|++++++.++.+.+.++++. ... .|-.+.+.+.+. .+.+|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999997 9999999999999999999999998887777666652 211 355554433322 24799
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
++|+++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999986
No 199
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.81 E-value=0.00038 Score=57.81 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCc--ccHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~v 110 (220)
+++++||.|+ |.+|..+++.+...|++|++++++. ++.+.+.++++... ..|..+.+.+.++ .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999997 9999999999999999999988743 23444444556432 2355555443322 2368999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|.++|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
No 200
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.79 E-value=0.0006 Score=52.82 Aligned_cols=99 Identities=17% Similarity=0.218 Sum_probs=66.1
Q ss_pred CCCEEEEEcC---chHHHHHHHHHHHCCCeEEEEeCCc---ccHHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 027668 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGADS--FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 106 (220)
.++++||.|+ +++|+++++.+...|++|+++.++. ++.+.+.++++... ..|-.+.+.+.++ .+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999996 4899999999999999999988874 23344444555322 2355554433322 247
Q ss_pred ccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+|++|+++|... ..+..+..++++|+++.++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 999999998420 1234555667789999887643
No 201
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.79 E-value=6.1e-05 Score=53.91 Aligned_cols=96 Identities=22% Similarity=0.283 Sum_probs=64.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecC------------------CC--HHHHHHh
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS------------------RD--QDEMQAA 103 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~------------------~~--~~~~~~~ 103 (220)
.+|+|+|+|.+|+.++++++.+|+++++.+...++.+.. +..+...+... .. ...+.+.
T Consensus 21 ~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 99 (168)
T PF01262_consen 21 AKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAEF 99 (168)
T ss_dssp -EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHHHH
Confidence 789999999999999999999999999999988776666 55565433221 01 1223333
Q ss_pred cCCccEEEEcCCCc-----c-cHHHHHhccccCCEEEEecCCC
Q 027668 104 MGTMDGIIDTVSAV-----H-PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 104 ~~~~d~vid~~g~~-----~-~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
...+|++|.+.-.+ . .-+..++.|+++..++.+....
T Consensus 100 i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 100 IAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 34789999643221 1 2346778899999999887643
No 202
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.79 E-value=9.9e-05 Score=54.59 Aligned_cols=101 Identities=31% Similarity=0.359 Sum_probs=63.6
Q ss_pred hHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHH---HHcCCcEE-ecCCCHHHHHHhcCCc
Q 027668 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAV---ERLGADSF-LVSRDQDEMQAAMGTM 107 (220)
Q Consensus 34 l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~---~~~g~~~v-~~~~~~~~~~~~~~~~ 107 (220)
++... ++||++||-+|+|+ |..++-+++..|. +|+.+...++-.+.+. +.+|...+ +...+-.........|
T Consensus 65 l~~L~-l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apf 142 (209)
T PF01135_consen 65 LEALD-LKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPF 142 (209)
T ss_dssp HHHTT-C-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SE
T ss_pred HHHHh-cCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCc
Confidence 44444 89999999999874 8888888888775 6888888876444433 34454321 2122211111112379
Q ss_pred cEEEEcCCCcccHHHHHhccccCCEEEEe
Q 027668 108 DGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 108 d~vid~~g~~~~~~~~~~~l~~~g~iv~~ 136 (220)
|.++-+.+....-...++.|++||++|..
T Consensus 143 D~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 143 DRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp EEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred CEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 99998887776567889999999999974
No 203
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.79 E-value=0.00078 Score=52.09 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=51.0
Q ss_pred CCCEEEEEcCc---hHHHHHHHHHHHCCCeEEEEeCCccc---HHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 027668 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAVERLGADS--FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~g---~~G~~~~~~~~~~g~~v~~~~~~~~~---~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 106 (220)
+++++||.|++ ++|.++++.+...|++|+++.++++. .+++.++.|... ..|-.+.+.++++ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 56889999974 89999999999999999998876432 233333445322 2344554433322 247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|+++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999874
No 204
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.78 E-value=0.00026 Score=46.28 Aligned_cols=91 Identities=21% Similarity=0.212 Sum_probs=62.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (220)
.|.+|||+|+|.+|..-++.+...|++|++++... ... + +.-..... . .+....++++||-+.+....-+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~-~--~~i~~~~~-~---~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFS-E--GLIQLIRR-E---FEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHH-H--TSCEEEES-S----GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhh-h--hHHHHHhh-h---HHHHHhhheEEEecCCCHHHHH
Confidence 57899999999999999999999999999999886 111 1 22222211 1 1233468999999999986445
Q ss_pred HHHhccccCCEEEEecCCCCC
Q 027668 122 PLIGLLKSQGKLVLLGAPEKP 142 (220)
Q Consensus 122 ~~~~~l~~~g~iv~~g~~~~~ 142 (220)
......+..|.++........
T Consensus 76 ~i~~~a~~~~i~vn~~D~p~~ 96 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDPEL 96 (103)
T ss_dssp HHHHHHHHTTSEEEETT-CCC
T ss_pred HHHHHHhhCCEEEEECCCcCC
Confidence 566666778999988765543
No 205
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00072 Score=52.35 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~v 110 (220)
.++++||.|+ |.+|..+++.+...|++|++++++.++.+.+.+..+.. ...|..+.+.+.+. .+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999997 99999999999999999999999887766654433321 12344454443322 1368999
Q ss_pred EEcCCCc
Q 027668 111 IDTVSAV 117 (220)
Q Consensus 111 id~~g~~ 117 (220)
|.++|..
T Consensus 83 v~~ag~~ 89 (277)
T PRK06180 83 VNNAGYG 89 (277)
T ss_pred EECCCcc
Confidence 9998863
No 206
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.77 E-value=0.0002 Score=56.85 Aligned_cols=94 Identities=17% Similarity=0.241 Sum_probs=67.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHH-HHCCC-eEEEEeCCcccHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~-~~~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (220)
...++++|+|+|..|...+..+ ...++ +|.++++++++.+.+.+++ +.... ...+ .++...+.|+|+.|+
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~---~~~~~~~aDiVi~aT 200 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS---ADEAIEEADIIVTVT 200 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC---HHHHHhcCCEEEEcc
Confidence 4557899999999998777654 45677 8889999988877776544 43322 1222 223335799999999
Q ss_pred CCcccHHHHHhccccCCEEEEecCCC
Q 027668 115 SAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 115 g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+..+.+- . ..+++|-++..+|...
T Consensus 201 ~s~~p~i-~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 201 NAKTPVF-S-EKLKKGVHINAVGSFM 224 (325)
T ss_pred CCCCcch-H-HhcCCCcEEEecCCCC
Confidence 8875433 4 8889999999998864
No 207
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.77 E-value=0.00063 Score=50.11 Aligned_cols=81 Identities=22% Similarity=0.158 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhc-CCccEEEEcCCCccc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~~~ 119 (220)
-.|.+++|+|.|.+|..+++.+...|++|++.+.+.++.+.+.+.+|+..+ +.. ++. ..+|+++.|+.....
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v-~~~------~l~~~~~Dv~vp~A~~~~I 98 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV-APE------EIYSVDADVFAPCALGGVI 98 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-cch------hhccccCCEEEeccccccc
Confidence 467899999999999999999999999999999888877777666675533 221 111 268888877654433
Q ss_pred HHHHHhccc
Q 027668 120 LMPLIGLLK 128 (220)
Q Consensus 120 ~~~~~~~l~ 128 (220)
-...++.++
T Consensus 99 ~~~~~~~l~ 107 (200)
T cd01075 99 NDDTIPQLK 107 (200)
T ss_pred CHHHHHHcC
Confidence 344555554
No 208
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.77 E-value=0.00044 Score=53.84 Aligned_cols=86 Identities=15% Similarity=0.249 Sum_probs=54.4
Q ss_pred hhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcc---cHHHHHHHcCCc-----EEecCCCHHHHH
Q 027668 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---KKSEAVERLGAD-----SFLVSRDQDEMQ 101 (220)
Q Consensus 31 ~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~---~~~~~~~~~g~~-----~v~~~~~~~~~~ 101 (220)
..+|+....-.++++++|+|+|+.+.+++..+...|+ +++++.|+.+ +.+.++++++.. .+....+.+.+.
T Consensus 112 ~~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~ 191 (288)
T PRK12749 112 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA 191 (288)
T ss_pred HHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhh
Confidence 4445443322366899999999889988887778898 8999999853 556665655421 122211111222
Q ss_pred HhcCCccEEEEcCCC
Q 027668 102 AAMGTMDGIIDTVSA 116 (220)
Q Consensus 102 ~~~~~~d~vid~~g~ 116 (220)
+....+|+||+|+.-
T Consensus 192 ~~~~~aDivINaTp~ 206 (288)
T PRK12749 192 EALASADILTNGTKV 206 (288)
T ss_pred hhcccCCEEEECCCC
Confidence 233479999998854
No 209
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.76 E-value=0.00025 Score=61.44 Aligned_cols=77 Identities=22% Similarity=0.317 Sum_probs=56.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc--------------------cHHHHHHHcCCcEEecCCC-HH-H
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAVERLGADSFLVSRD-QD-E 99 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~--------------------~~~~~~~~~g~~~v~~~~~-~~-~ 99 (220)
.+++|+|+|+|+.|+.++..++..|.+|+++.+.+. ...+..+++|++..++..- .+ .
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 388 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDIT 388 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcCC
Confidence 489999999999999999999999999999987753 1223446778765554431 11 2
Q ss_pred HHHhcCCccEEEEcCCCcc
Q 027668 100 MQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~ 118 (220)
+.++..++|.||.++|...
T Consensus 389 ~~~l~~~~DaV~latGa~~ 407 (639)
T PRK12809 389 FSDLTSEYDAVFIGVGTYG 407 (639)
T ss_pred HHHHHhcCCEEEEeCCCCC
Confidence 3334458999999999853
No 210
>PRK09242 tropinone reductase; Provisional
Probab=97.76 E-value=0.00072 Score=51.69 Aligned_cols=75 Identities=13% Similarity=0.250 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc-----CCcE---EecCCCHHHHHH-------hcC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEMQA-------AMG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~-------~~~ 105 (220)
.+++++|.|+ |.+|..+++.+...|++|++++++.++.+++..++ +... ..|..+.+.+.+ ..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999997 99999999999999999999999887665554433 2211 124444433322 224
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
++|++|.++|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999986
No 211
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00032 Score=53.54 Aligned_cols=75 Identities=21% Similarity=0.277 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE-EecCCCHHHHHHhc-------CCccEEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAM-------GTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~-------~~~d~vid 112 (220)
+|++|+|.|+ |.+|..+++.+...|++|+++++++.+.+...++++... ..|..+.+.+++.. +++|++|.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999997 999999999999999999999998776666555555432 23555554443222 37899999
Q ss_pred cCCC
Q 027668 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9875
No 212
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.76 E-value=0.0018 Score=45.72 Aligned_cols=113 Identities=15% Similarity=0.062 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (220)
-.|.+|+|+|+|.+|..-++.+...|++|++++ ++..+++ ++++...+ .....+ .....++|+||-+++... .
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l-~~l~~i~~-~~~~~~--~~dl~~a~lViaaT~d~e-~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEM-KELPYITW-KQKTFS--NDDIKDAHLIYAATNQHA-V 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHH-HhccCcEE-EecccC--hhcCCCceEEEECCCCHH-H
Confidence 467899999999999999999999999999884 3333444 33543222 121111 111248999999998885 5
Q ss_pred HHHHhccccCCEEEEecCCCCCcccCccc-cccCCcEEEEe
Q 027668 121 MPLIGLLKSQGKLVLLGAPEKPLELPAFP-LLTGEKIVGGS 160 (220)
Q Consensus 121 ~~~~~~l~~~g~iv~~g~~~~~~~~~~~~-~~~~~~~i~~~ 160 (220)
+..+...++.+.++.........++-.+. +-..++++.-+
T Consensus 84 N~~i~~~a~~~~~vn~~d~~~~~~f~~pa~v~~~~l~iais 124 (157)
T PRK06719 84 NMMVKQAAHDFQWVNVVSDGTESSFHTPGVIRNDEYVVTIS 124 (157)
T ss_pred HHHHHHHHHHCCcEEECCCCCcCcEEeeeEEEECCeEEEEE
Confidence 55444444334455443333323333332 33445666544
No 213
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.76 E-value=0.00049 Score=54.37 Aligned_cols=96 Identities=24% Similarity=0.239 Sum_probs=66.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHH---HHcCCcEEe-cCCCH-HHHHHhcCCccEEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAV---ERLGADSFL-VSRDQ-DEMQAAMGTMDGII 111 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~---~~~g~~~v~-~~~~~-~~~~~~~~~~d~vi 111 (220)
.++++++||.+|+| +|..++.+++..+. .|+.++.+++..+.+. ++.|.+.+. ...+. +.... .+.||+|+
T Consensus 77 ~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~-~~~fD~Ii 154 (322)
T PRK13943 77 GLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPE-FAPYDVIF 154 (322)
T ss_pred CCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccc-cCCccEEE
Confidence 36889999999998 49999999998764 6899999887554443 345554222 11121 11111 13799999
Q ss_pred EcCCCcccHHHHHhccccCCEEEEe
Q 027668 112 DTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~g~iv~~ 136 (220)
.+.+.........+.++++|+++..
T Consensus 155 ~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 155 VTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ECCchHHhHHHHHHhcCCCCEEEEE
Confidence 9888765566788899999998764
No 214
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.75 E-value=0.00083 Score=45.09 Aligned_cols=97 Identities=19% Similarity=0.270 Sum_probs=64.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCC-CeEEEEeCCcccHHHHHH---HcCCc--EEecCCCHHHHHHhcCCccEEEEc
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVE---RLGAD--SFLVSRDQDEMQAAMGTMDGIIDT 113 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~~~d~vid~ 113 (220)
+.++++|+-+|+|. |..+..+++..+ .+++.++.++...+.+.+ .++.. .++..+-........+.+|.|+-.
T Consensus 17 ~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~ 95 (124)
T TIGR02469 17 LRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIG 95 (124)
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEEC
Confidence 56788999999986 888888888875 599999998876655432 34432 122211111111222479999976
Q ss_pred CCCcc---cHHHHHhccccCCEEEEec
Q 027668 114 VSAVH---PLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 114 ~g~~~---~~~~~~~~l~~~g~iv~~g 137 (220)
.+... .++.+.+.|+++|.+++..
T Consensus 96 ~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 96 GSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 54322 4677888999999998753
No 215
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.75 E-value=0.00036 Score=58.54 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=55.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
+.++++|+|+|.|.+|++++++++..|++|++.+..+.+.+.+ +++|+..+......+.+ ..+|+||.+.|-+.
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~~l----~~~D~VV~SpGi~~ 82 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQQI----ADYALVVTSPGFRP 82 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHhHh----hcCCEEEECCCCCC
Confidence 4678999999999999999999999999999988776555444 56787543222222222 36899999998863
No 216
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00049 Score=52.25 Aligned_cols=98 Identities=20% Similarity=0.285 Sum_probs=62.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHHH---HcCCc---EEecCCCHHHHHHhc-------CC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVE---RLGAD---SFLVSRDQDEMQAAM-------GT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~---~~g~~---~v~~~~~~~~~~~~~-------~~ 106 (220)
++++++|.|+ |.+|..+++.+...|++|+++.++.+ +.+.+.. ..+.. ...|..+.+.+.... ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999997 99999999999999999998888653 3333322 22322 123555554443221 36
Q ss_pred ccEEEEcCCCcc-------------------cHHHHHhccccCCEEEEecCC
Q 027668 107 MDGIIDTVSAVH-------------------PLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 107 ~d~vid~~g~~~-------------------~~~~~~~~l~~~g~iv~~g~~ 139 (220)
+|++|.++|... .++.+.+.++.+|+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 899998876431 223445555567888888653
No 217
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00031 Score=53.77 Aligned_cols=77 Identities=19% Similarity=0.316 Sum_probs=55.7
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc----EEecCCCHHHHHHh-------cCCcc
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD----SFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~-------~~~~d 108 (220)
.++.++||.|+ |.+|..+++.+...|++|++++++++..+.+.+..+.. ...|..+.+.+.+. .+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 57789999997 99999999999999999999999877666554443322 22344454433322 24799
Q ss_pred EEEEcCCCc
Q 027668 109 GIIDTVSAV 117 (220)
Q Consensus 109 ~vid~~g~~ 117 (220)
+||.++|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999998764
No 218
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00034 Score=53.30 Aligned_cols=75 Identities=21% Similarity=0.296 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC-cEEecCCCHHHHHHhcCCccEEEEcCCC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (220)
.+++++|.|+ |.+|..+++.+...|++|+++++++............ ....|-.+.+.+.+..+++|++|+++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4689999997 9999999999999999999998876221111111111 1223555566666666789999999986
No 219
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.0013 Score=50.74 Aligned_cols=72 Identities=22% Similarity=0.309 Sum_probs=50.4
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCc----EEecCCCHHHHHHh-------cCCccE
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD----SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~----~v~~~~~~~~~~~~-------~~~~d~ 109 (220)
+++|.|+ |++|..+++.+...|++|++++++++..+.+.++ .+.. ...|-.+.+.+.+. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6899997 9999999999999999999999887665544333 2322 12355554433221 247899
Q ss_pred EEEcCCC
Q 027668 110 IIDTVSA 116 (220)
Q Consensus 110 vid~~g~ 116 (220)
+|.++|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999985
No 220
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.71 E-value=0.00081 Score=52.14 Aligned_cols=86 Identities=20% Similarity=0.249 Sum_probs=60.9
Q ss_pred hhhHhccCCCCCCEEEEEcCch-HHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEE
Q 027668 32 SPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 32 ~~l~~~~~~~~~~~vlI~G~g~-~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (220)
..++...---.|++|+|+|+|. +|..++.++...|+.|++..+... . +.+...++|++
T Consensus 148 ~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~------------------L~~~~~~aDIv 206 (283)
T PRK14192 148 RLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---N------------------LPELVKQADII 206 (283)
T ss_pred HHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---h------------------HHHHhccCCEE
Confidence 3344444336789999999976 999999999999998877765321 1 11222478999
Q ss_pred EEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 111 IDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 111 id~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
|+++|.+..+. .+.++++..++.+|...
T Consensus 207 I~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 207 VGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred EEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 99998775433 35588888888887643
No 221
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.70 E-value=0.00052 Score=53.30 Aligned_cols=75 Identities=19% Similarity=0.324 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcC----CcEEecCCCHHHHHHhcCCccEEEEcCC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (220)
..+++++|+|+|+.+.+++.-+...|+ +++++.++.++.+.+++.+. ...+. ..+..........+|+|+||+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence 357899999999999999998888998 89999999888777766553 11121 1111111222246899999986
Q ss_pred C
Q 027668 116 A 116 (220)
Q Consensus 116 ~ 116 (220)
-
T Consensus 204 ~ 204 (283)
T PRK14027 204 M 204 (283)
T ss_pred C
Confidence 4
No 222
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.70 E-value=0.00035 Score=54.01 Aligned_cols=106 Identities=22% Similarity=0.139 Sum_probs=67.0
Q ss_pred hhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC---cEEecCCCHHHHHHhc
Q 027668 28 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSFLVSRDQDEMQAAM 104 (220)
Q Consensus 28 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~ 104 (220)
.....++.+.....++++++|+|+|++|.+++..+...|++|+++.++.++.+.+.++++. ...... +. ...
T Consensus 102 ~G~~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~--~~~ 176 (270)
T TIGR00507 102 IGLVSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM---DE--LPL 176 (270)
T ss_pred HHHHHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech---hh--hcc
Confidence 3334445443333557899999999999999998888899999999998877776665542 122211 11 112
Q ss_pred CCccEEEEcCCCcc--cHH---HHHhccccCCEEEEecC
Q 027668 105 GTMDGIIDTVSAVH--PLM---PLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 105 ~~~d~vid~~g~~~--~~~---~~~~~l~~~g~iv~~g~ 138 (220)
..+|+||+|++... ... .....++++..++.+..
T Consensus 177 ~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 177 HRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred cCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 47899999997641 010 11234566666665544
No 223
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.70 E-value=0.0013 Score=50.08 Aligned_cols=75 Identities=21% Similarity=0.317 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 107 (220)
+++++||.|+ |.+|..+++.+...|++|+++++++++.+.+..++ +.. ...|-.+.+.+.+. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999997 99999999999999999999999887665554333 322 12244454444322 2379
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998875
No 224
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.69 E-value=0.0011 Score=51.19 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=51.9
Q ss_pred CCCCCEEEEEcC---chHHHHHHHHHHHCCCeEEEEeCCc---ccHHHHHHHcCCc--EEecCCCHHHHHHh-------c
Q 027668 40 DKPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGAD--SFLVSRDQDEMQAA-------M 104 (220)
Q Consensus 40 ~~~~~~vlI~G~---g~~G~~~~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~-------~ 104 (220)
...++++||.|+ +++|.++++.+...|++|+++.+++ ++.+++.++++.. ...|-.+.+.++++ .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 346789999986 5899999999999999998887653 3334444455532 22344444433322 2
Q ss_pred CCccEEEEcCCC
Q 027668 105 GTMDGIIDTVSA 116 (220)
Q Consensus 105 ~~~d~vid~~g~ 116 (220)
+.+|++|+++|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 479999999874
No 225
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00028 Score=55.18 Aligned_cols=76 Identities=21% Similarity=0.349 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE-E--ecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS-F--LVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+++ +... . .|-.+.+.+.+. .+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999997 99999999999999999999999987665554432 3221 1 244444433322 2479
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|++|+++|..
T Consensus 119 d~li~~AG~~ 128 (293)
T PRK05866 119 DILINNAGRS 128 (293)
T ss_pred CEEEECCCCC
Confidence 9999998753
No 226
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.68 E-value=0.00059 Score=50.78 Aligned_cols=96 Identities=30% Similarity=0.320 Sum_probs=63.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCC--CeEEEEeCCcccHHHHHHH---cCCc--EEecCCCHHHHHHhcCCccEEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDGII 111 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~vi 111 (220)
.++++++||-+|+|. |..+..+++..+ .+|+.++.+++..+.+.+. .|.. .++..+..+.. ...+.||.|+
T Consensus 73 ~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD~I~ 150 (212)
T PRK13942 73 DLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYDRIY 150 (212)
T ss_pred CCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcCEEE
Confidence 478999999999875 777777887765 4899999998765555333 3432 12222111110 0113799998
Q ss_pred EcCCCcccHHHHHhccccCCEEEEe
Q 027668 112 DTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~g~iv~~ 136 (220)
-............+.|++||+++..
T Consensus 151 ~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 151 VTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred ECCCcccchHHHHHhhCCCcEEEEE
Confidence 6555555667788999999998875
No 227
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.68 E-value=0.00042 Score=53.18 Aligned_cols=75 Identities=23% Similarity=0.276 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc---EEecCCCHHHHHHh-------cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~~~d~v 110 (220)
+++++||.|+ |.+|..+++.+...|++|+++++++++.+.+.++++.. ...|-.+.+.+++. .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5689999997 89999999999999999999999888777765555531 12244444333221 2479999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|+++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999884
No 228
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00063 Score=52.10 Aligned_cols=74 Identities=19% Similarity=0.258 Sum_probs=53.4
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-C--c-EEecCCCHHHHHHh--------cCCccEE
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-A--D-SFLVSRDQDEMQAA--------MGTMDGI 110 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~--~-~v~~~~~~~~~~~~--------~~~~d~v 110 (220)
+++||.|+ |.+|..+++.+...|++|++++++.++.+++.+..+ . . ...|-.+.+.+.+. .+.+|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 47899997 999999999999999999999998887766655543 1 1 12344454433321 3478999
Q ss_pred EEcCCCc
Q 027668 111 IDTVSAV 117 (220)
Q Consensus 111 id~~g~~ 117 (220)
|.++|..
T Consensus 82 i~~ag~~ 88 (260)
T PRK08267 82 FNNAGIL 88 (260)
T ss_pred EECCCCC
Confidence 9999863
No 229
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.67 E-value=0.00042 Score=53.49 Aligned_cols=82 Identities=17% Similarity=0.250 Sum_probs=58.3
Q ss_pred hhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhc
Q 027668 26 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM 104 (220)
Q Consensus 26 ~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 104 (220)
-+...+.+++... ..++++++|+|+|+.+.+++.-++..|+ +++++.|+.++.+.+++.++... . +.. ..
T Consensus 106 D~~Gf~~~L~~~~-~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~ 176 (272)
T PRK12550 106 DYIAIAKLLASYQ-VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GG 176 (272)
T ss_pred CHHHHHHHHHhcC-CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--cc
Confidence 3334445565443 3556789999999999999999999998 79999999988888777665321 0 111 01
Q ss_pred CCccEEEEcCCC
Q 027668 105 GTMDGIIDTVSA 116 (220)
Q Consensus 105 ~~~d~vid~~g~ 116 (220)
..+|+||+|+..
T Consensus 177 ~~~dlvINaTp~ 188 (272)
T PRK12550 177 IEADILVNVTPI 188 (272)
T ss_pred ccCCEEEECCcc
Confidence 368999999864
No 230
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.67 E-value=0.0018 Score=49.17 Aligned_cols=72 Identities=19% Similarity=0.276 Sum_probs=52.0
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEEEEc
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGIIDT 113 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~vid~ 113 (220)
+++|.|+ |.+|..+++.+...|++|+++++++++.+.+...++... ..|-.+.+.+.+. .+++|.+|.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5889997 999999999999999999999999877666655555322 1244444433322 2479999999
Q ss_pred CCC
Q 027668 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 875
No 231
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.67 E-value=0.0013 Score=50.45 Aligned_cols=76 Identities=14% Similarity=0.234 Sum_probs=50.1
Q ss_pred CCCCEEEEEcC-c--hHHHHHHHHHHHCCCeEEEEeCCcc---cHHHHHHHcCCcEE--ecCCCHHHHHHh-------cC
Q 027668 41 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADSF--LVSRDQDEMQAA-------MG 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g--~~G~~~~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~ 105 (220)
..|+.++|.|+ + ++|.++++.+...|++|++..+++. ..+++.++.|.... .|-.+.+.++++ .+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35688999997 4 7999999988889999998877632 22333333353322 355555444322 24
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
.+|++++++|.
T Consensus 86 ~iDilVnnag~ 96 (260)
T PRK06603 86 SFDFLLHGMAF 96 (260)
T ss_pred CccEEEEcccc
Confidence 79999998874
No 232
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.67 E-value=0.00037 Score=54.77 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHH-CCC-eEEEEeCCcccHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (220)
....+++|+|+|..|.+.+..+.. .+. ++.+..++.++.+.++++++.. .+. .. ...+...++|+|+.|++.
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~---~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PL---DGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-EC---CHHHHhhcCCEEEEccCC
Confidence 456789999999999999888764 676 8999999998888877776421 111 11 223334589999999877
Q ss_pred cccHHHHHhccccCCEEEEecCCCC
Q 027668 117 VHPLMPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 117 ~~~~~~~~~~l~~~g~iv~~g~~~~ 141 (220)
...+-.. .+++|-.+..+|....
T Consensus 199 ~~Pl~~~--~~~~g~hi~~iGs~~p 221 (304)
T PRK07340 199 RTPVYPE--AARAGRLVVAVGAFTP 221 (304)
T ss_pred CCceeCc--cCCCCCEEEecCCCCC
Confidence 6544333 3789999999997653
No 233
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.66 E-value=0.00023 Score=54.58 Aligned_cols=108 Identities=22% Similarity=0.243 Sum_probs=70.9
Q ss_pred hhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCc-EE-ecCCCHHHHHHh
Q 027668 29 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGAD-SF-LVSRDQDEMQAA 103 (220)
Q Consensus 29 ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~-~v-~~~~~~~~~~~~ 103 (220)
..+..+.....++||+++|=+|||- |.+++..|+.+|++|+.++-+++..+.+.+ +.|.. .+ +...+ .+.+
T Consensus 59 ~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d---~rd~ 134 (283)
T COG2230 59 AKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD---YRDF 134 (283)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc---cccc
Confidence 3344444444589999999999975 778889999999999999999886555433 34533 11 11111 1122
Q ss_pred cCCccEEE-----EcCCCc---ccHHHHHhccccCCEEEEecCCC
Q 027668 104 MGTMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 104 ~~~~d~vi-----d~~g~~---~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
.+.||-|+ +.+|.. .-+..+-+.|+++|++.+-....
T Consensus 135 ~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 135 EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 23577764 345552 23567888999999999876654
No 234
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.0011 Score=50.79 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc--CC--cE-EecCCCHHHHHHh------cCCccE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GA--DS-FLVSRDQDEMQAA------MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~--~~-v~~~~~~~~~~~~------~~~~d~ 109 (220)
++.++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+++ +. .. ..|-.+.+.+..+ .+.+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999997 99999999999999999999999887766654443 21 11 1234444333322 247899
Q ss_pred EEEcCCCc
Q 027668 110 IIDTVSAV 117 (220)
Q Consensus 110 vid~~g~~ 117 (220)
+|.++|..
T Consensus 84 lv~~ag~~ 91 (263)
T PRK09072 84 LINNAGVN 91 (263)
T ss_pred EEECCCCC
Confidence 99998763
No 235
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.63 E-value=0.0019 Score=49.45 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=64.1
Q ss_pred CCCEEEEEcCc---hHHHHHHHHHHHCCCeEEEEeCCccc---HHHHHHHcCCcEE--ecCCCHHHHHHh-------cCC
Q 027668 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~g---~~G~~~~~~~~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (220)
.|+++||.|++ ++|.++++.+...|++|++++++++. .+++.++++.... .|-.+.+.++++ .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999963 89999999999999999998887532 2334344443222 244444433322 247
Q ss_pred ccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+|++|+++|... ..+.++..++.+|+++.++...
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 899999987421 1133455666678888876543
No 236
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.62 E-value=0.00062 Score=52.24 Aligned_cols=75 Identities=27% Similarity=0.285 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc---EEecCCCHHHHH----Hh---cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD---SFLVSRDQDEMQ----AA---MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~----~~---~~~~d~v 110 (220)
++++++|.|+ |.+|..+++.+...|++|++++++.++.+++....+.. ...|-.+.+.+. +. .+.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999997 89999999999999999999999887766664444422 112444433222 22 2478999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|+++|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999874
No 237
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.62 E-value=0.0018 Score=51.17 Aligned_cols=126 Identities=24% Similarity=0.341 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCC-ccc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA-VHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~-~~~ 119 (220)
-.|+++-|+|.|.+|+++++.++..|++|...+++.. .+..+++++.++ + +.++....|++.-..+. +++
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~----~---l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV----D---LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec----c---HHHHHHhCCEEEEeCCCChHH
Confidence 3588999999999999999999999999999998875 233245555544 1 33444568888765543 332
Q ss_pred ---H-HHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCccee-EEEEecccH--
Q 027668 120 ---L-MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRAD-IEVIPADYV-- 192 (220)
Q Consensus 120 ---~-~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~i-- 192 (220)
+ ...+..|++++.+|.++...- -+-+.+++.+++|.+... .++|..|..
T Consensus 215 ~hLin~~~l~~mk~ga~lVNtaRG~~------------------------VDe~ALi~AL~~g~i~gaglDV~e~Ep~~~ 270 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTARGGL------------------------VDEQALIDALKSGKIAGAGLDVFENEPALF 270 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECCCccc------------------------cCHHHHHHHHHhCCcceEEeeecCCCCCCC
Confidence 1 346778999999998876331 134567777777777754 366665544
Q ss_pred HHHHHHH
Q 027668 193 NTAMERL 199 (220)
Q Consensus 193 ~~a~~~~ 199 (220)
+..+..+
T Consensus 271 d~~l~~l 277 (324)
T COG1052 271 DHPLLRL 277 (324)
T ss_pred ChhHhhc
Confidence 3444443
No 238
>PLN00203 glutamyl-tRNA reductase
Probab=97.61 E-value=0.00072 Score=56.80 Aligned_cols=76 Identities=24% Similarity=0.332 Sum_probs=56.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
.+.+|+|+|+|.+|.++++.+...|+ +|+++.++.++.+.+..+++...+ .....+...+...++|+||.|++...
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~ 341 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSET 341 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCC
Confidence 36899999999999999999999998 799999998888888777742111 11112223344468999999987764
No 239
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.61 E-value=0.00031 Score=51.86 Aligned_cols=77 Identities=22% Similarity=0.396 Sum_probs=50.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcc-------------------cHHHHH---HHcCCc-EE--ec-C
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKSEAV---ERLGAD-SF--LV-S 94 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~-------------------~~~~~~---~~~g~~-~v--~~-~ 94 (220)
.+.+|+|+|+|++|..+++.+...|. ++++++.+.- |.+.+. +++... .+ ++ .
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 34789999999999999999999999 8888887622 111111 222211 11 11 1
Q ss_pred CCHHHHHHhcCCccEEEEcCCCcc
Q 027668 95 RDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 95 ~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
-+.+.+.++..++|+||+|..+..
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~d~~~ 123 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCTDNFA 123 (202)
T ss_pred CCHHHHHHHHhCCCEEEECCCCHH
Confidence 122334455568999999998865
No 240
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.0019 Score=49.94 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=53.2
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEEE
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGII 111 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~vi 111 (220)
++++||.|+ |.+|..+++.+...|++|++++++.++.+.+.+.++... -.|..+.+.+.+. .+++|.+|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999997 999999999998899999999998877666544444221 1234444333221 24789999
Q ss_pred EcCCCc
Q 027668 112 DTVSAV 117 (220)
Q Consensus 112 d~~g~~ 117 (220)
.++|..
T Consensus 83 ~~ag~~ 88 (275)
T PRK08263 83 NNAGYG 88 (275)
T ss_pred ECCCCc
Confidence 999864
No 241
>PRK04457 spermidine synthase; Provisional
Probab=97.60 E-value=0.003 Score=48.56 Aligned_cols=95 Identities=18% Similarity=0.219 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCC-CeEEEEeCCcccHHHHHHHcCC----c--EEecCCCHHHHHHhcCCccEEE-E
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA----D--SFLVSRDQDEMQAAMGTMDGII-D 112 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~----~--~v~~~~~~~~~~~~~~~~d~vi-d 112 (220)
.+.++||++|+|+ |..+..+++... .++++++.+++-.+.+.+.|+. + .++..+-.+.+.+..+.+|+|| |
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4567899999875 777777777764 5999999998877766555552 1 2333332344444445899997 4
Q ss_pred cCCC---------cccHHHHHhccccCCEEEEe
Q 027668 113 TVSA---------VHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 113 ~~g~---------~~~~~~~~~~l~~~g~iv~~ 136 (220)
+... ...++.+.+.|+++|.++..
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 3221 12356788899999999873
No 242
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.60 E-value=0.0014 Score=49.92 Aligned_cols=75 Identities=20% Similarity=0.381 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+++ +... ..|-.+.+.+.+. .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4688999997 99999999999999999999999877655543333 3221 1244444433322 2479
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999985
No 243
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.0016 Score=49.22 Aligned_cols=73 Identities=16% Similarity=0.059 Sum_probs=50.2
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-Cc-EEecCCCHHHHHHhcC----CccEEEEcCCC
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-AD-SFLVSRDQDEMQAAMG----TMDGIIDTVSA 116 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~~~----~~d~vid~~g~ 116 (220)
.+++|.|+ |++|..+++.+...|++|+++++++++.+++..... .. ...|-.+.+.+.+... ..|.++.++|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 46899997 999999999988999999999998877666543322 22 1235555555544432 46777766653
No 244
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.59 E-value=0.0016 Score=49.68 Aligned_cols=98 Identities=16% Similarity=0.214 Sum_probs=62.8
Q ss_pred CCCEEEEEcCc---hHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC---c-EEecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---D-SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~g---~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~-~v~~~~~~~~~~~~-------~~~~ 107 (220)
.|++++|.|++ ++|.++++.+...|++|+++.+++ +.++..+++.. . ...|-.+.+.++++ .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999963 899999999999999999988873 33333333321 1 11344444433322 2479
Q ss_pred cEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 108 DGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 108 d~vid~~g~~~-----------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
|++|+++|... ..+..+..++++|+++.++...
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 146 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFG 146 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccC
Confidence 99999987421 0123345566778988887644
No 245
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.58 E-value=0.0024 Score=47.95 Aligned_cols=101 Identities=15% Similarity=0.247 Sum_probs=63.0
Q ss_pred hhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCe---EEEEeCC----cccH-------HHHHHHcCCcEEecCCC
Q 027668 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK---VTVISTS----PSKK-------SEAVERLGADSFLVSRD 96 (220)
Q Consensus 31 ~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~---v~~~~~~----~~~~-------~~~~~~~g~~~v~~~~~ 96 (220)
..+++....--.+.+++|+|+|..|..++..+...|++ +++++++ .++. +.+.+.++... .. .
T Consensus 13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-~- 89 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-G- 89 (226)
T ss_pred HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc-C-
Confidence 34455443224668999999999999999999999985 8888887 3332 23434443221 11 1
Q ss_pred HHHHHHhcCCccEEEEcCCCcccH-HHHHhccccCCEEEEec
Q 027668 97 QDEMQAAMGTMDGIIDTVSAVHPL-MPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~g~iv~~g 137 (220)
.+.+...++|++|++++.. .+ ...++.++++..+..+.
T Consensus 90 --~l~~~l~~~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 90 --TLKEALKGADVFIGVSRPG-VVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred --CHHHHHhcCCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeC
Confidence 1222234699999999733 33 35566676666555443
No 246
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.58 E-value=0.0022 Score=49.19 Aligned_cols=99 Identities=16% Similarity=0.228 Sum_probs=64.0
Q ss_pred CCCEEEEEcC---chHHHHHHHHHHHCCCeEEEEeCCc---ccHHHHHHHc-CCc---EEecCCCHHHHHHh-------c
Q 027668 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERL-GAD---SFLVSRDQDEMQAA-------M 104 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~~~~~~g~~v~~~~~~~---~~~~~~~~~~-g~~---~v~~~~~~~~~~~~-------~ 104 (220)
.+++++|.|+ +++|.++++.+...|++|+++.++. ++.+++.+++ +.. ...|-.+.+.+.++ .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 4688999996 5999999999999999999886542 3344554444 221 12344454433322 2
Q ss_pred CCccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 105 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 105 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+.+|++|+++|... ..+..+..++++|+|+.++...
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 47999999887421 0123445566789999887654
No 247
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=97.58 E-value=0.0053 Score=45.76 Aligned_cols=117 Identities=13% Similarity=-0.034 Sum_probs=70.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
.++.+|||+|+|.++.-=++.+...|++|++++..-. ....+. ..|.-.... .+.+ .....++++||-|++....
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~~-r~~~--~~dl~g~~LViaATdD~~v 98 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLIK-GNYD--KEFIKDKHLIVIATDDEKL 98 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEEe-CCCC--hHHhCCCcEEEECCCCHHH
Confidence 3578999999999999888888889999998887643 222332 233222221 1111 1122589999999998853
Q ss_pred HHHHHhccccCCEEEEecCCCCCcccCccccc-cCCcEEEEee
Q 027668 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL-TGEKIVGGSL 161 (220)
Q Consensus 120 ~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~-~~~~~i~~~~ 161 (220)
-.......+..+.++.........++-.+.+. ...+++.-+.
T Consensus 99 N~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 99 NNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred HHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence 33444444555777766544333444433333 3456665443
No 248
>PRK06128 oxidoreductase; Provisional
Probab=97.58 E-value=0.0021 Score=50.43 Aligned_cols=99 Identities=13% Similarity=0.194 Sum_probs=63.2
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc--HHHH---HHHcCCcEE---ecCCCHHHHHHh-------cC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEA---VERLGADSF---LVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~--~~~~---~~~~g~~~v---~~~~~~~~~~~~-------~~ 105 (220)
.++++||.|+ |.+|..+++.+...|++|+++.++.+. .+.. .+..|.... .|-.+.+.++++ .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4689999997 999999999999999999887765331 1222 233343221 244444433322 24
Q ss_pred CccEEEEcCCCcc--------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 106 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 106 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
++|++|.++|... ..+.++..++++|+++.++...
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 7999999988521 1233445556788999887653
No 249
>PRK07574 formate dehydrogenase; Provisional
Probab=97.58 E-value=0.0025 Score=51.59 Aligned_cols=91 Identities=19% Similarity=0.237 Sum_probs=64.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~- 120 (220)
.|.+|.|+|.|.+|+.+++.++.+|++|++.+++....+ ..+.+|.... . .+.++....|+|+.+.......
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~-~~~~~g~~~~---~---~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEE-VEQELGLTYH---V---SFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchh-hHhhcCceec---C---CHHHHhhcCCEEEEcCCCCHHHH
Confidence 567899999999999999999999999999998753322 2234554321 1 2444556789999888754322
Q ss_pred ----HHHHhccccCCEEEEecCC
Q 027668 121 ----MPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 121 ----~~~~~~l~~~g~iv~~g~~ 139 (220)
...+..|+++..+|.++..
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aRG 286 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTARG 286 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCCC
Confidence 2457788998888887653
No 250
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=97.58 E-value=0.0027 Score=46.99 Aligned_cols=118 Identities=15% Similarity=0.041 Sum_probs=77.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCc-ccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
-.|.+|||+|+|.+|.-=+.++...|++|+++.... ++...+..+.+...+-..-+.+ ...++++||-++++...
T Consensus 10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~----~~~~~~lviaAt~d~~l 85 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAE----DLDDAFLVIAATDDEEL 85 (210)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChh----hhcCceEEEEeCCCHHH
Confidence 367899999999999999999999999999998887 3444443333322221111111 12258999999999864
Q ss_pred HHHHHhccccCCEEEEecCCCCCcccCcccc-ccCCcEEEEeec
Q 027668 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPL-LTGEKIVGGSLI 162 (220)
Q Consensus 120 ~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~-~~~~~~i~~~~~ 162 (220)
-+......++.+.++.........++-.+.. -.+.+++.-+..
T Consensus 86 n~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~ 129 (210)
T COG1648 86 NERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTG 129 (210)
T ss_pred HHHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECC
Confidence 4556666777888888766555445444433 344566654444
No 251
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00057 Score=52.48 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc----CC-c---EEecCCCHHHHHHh-------cC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GA-D---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~-~---~v~~~~~~~~~~~~-------~~ 105 (220)
.+++++|.|+ |.+|..+++.+...|++|+++++++++.+...+++ +. . ...|-.+.+.+.++ .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4689999997 89999999999999999999999887655543332 11 1 12345555443322 24
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
++|++|+++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 252
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.57 E-value=0.0015 Score=41.98 Aligned_cols=86 Identities=20% Similarity=0.353 Sum_probs=59.8
Q ss_pred EEEEEcCchHHHHHHHHHHHCC---CeEEEE-eCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMG---VKVTVI-STSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g---~~v~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (220)
+|.|+|+|.+|.++++-+...| .+++++ .+++++.+++.++++...+. .+..+.+ +..|+||-|+-... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~----~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEEAA----QEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHHHH----HHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHHhh----ccCCEEEEEECHHH-H
Confidence 4678899999999999999999 788855 99999988888888865432 1222332 25899999998874 5
Q ss_pred HHHHhcc---ccCCEEEEe
Q 027668 121 MPLIGLL---KSQGKLVLL 136 (220)
Q Consensus 121 ~~~~~~l---~~~g~iv~~ 136 (220)
...+..+ .++..++.+
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 5554444 345555443
No 253
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00057 Score=52.32 Aligned_cols=75 Identities=20% Similarity=0.277 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc-----CCc---EEecCCCHHHHHHh-------cC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~---~v~~~~~~~~~~~~-------~~ 105 (220)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+++.+++ +.. ...|..+.+.+.++ .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4688999997 99999999999999999999999877666554443 221 12244444333322 24
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
++|++|.++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999885
No 254
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.57 E-value=0.00091 Score=54.59 Aligned_cols=76 Identities=18% Similarity=0.240 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC--Cc-EEecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--AD-SFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~-~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
.+++++|.|+ |.+|.++++.+...|++|+++++++++........+ .. ...|..+.+.+.+..+++|++|+++|..
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~ 256 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGIN 256 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCcC
Confidence 5789999997 999999999999999999999988765433322211 11 1235556666666667899999988753
No 255
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.56 E-value=0.0014 Score=48.48 Aligned_cols=97 Identities=28% Similarity=0.287 Sum_probs=64.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCC--CeEEEEeCCcccHHHHHH---HcCCc---EEecCCCHHHHHHhcCCccEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVE---RLGAD---SFLVSRDQDEMQAAMGTMDGI 110 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~~~~~d~v 110 (220)
.++++++||-+|+|. |..+..+++..+ .+|+.++.+++..+.+.+ ..+.. .++..+-.+... ..+.||.|
T Consensus 69 ~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD~I 146 (205)
T PRK13944 69 EPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFDAI 146 (205)
T ss_pred CCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCccEE
Confidence 368899999999875 777777787764 589999999876555433 33421 222222111111 12479999
Q ss_pred EEcCCCcccHHHHHhccccCCEEEEec
Q 027668 111 IDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 111 id~~g~~~~~~~~~~~l~~~g~iv~~g 137 (220)
+-+...........+.|++||+++..-
T Consensus 147 i~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 147 IVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred EEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 876655545567889999999998743
No 256
>PRK04148 hypothetical protein; Provisional
Probab=97.56 E-value=0.0024 Score=43.49 Aligned_cols=98 Identities=16% Similarity=0.164 Sum_probs=64.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (220)
.++.+++++|.| .|..++..++..|.+|++++.++...+.+ ++.+.+.+.+.-..... ++-.++|++..+=..++..
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~p~~-~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFNPNL-EIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCCCCH-HHHhcCCEEEEeCCCHHHH
Confidence 456889999999 78877777778999999999999887766 56676555432211111 2224789999888777644
Q ss_pred HHHHhcccc-CCEEEEecCCCC
Q 027668 121 MPLIGLLKS-QGKLVLLGAPEK 141 (220)
Q Consensus 121 ~~~~~~l~~-~g~iv~~g~~~~ 141 (220)
...++.-++ +..++..-..++
T Consensus 92 ~~~~~la~~~~~~~~i~~l~~e 113 (134)
T PRK04148 92 PFILELAKKINVPLIIKPLSGE 113 (134)
T ss_pred HHHHHHHHHcCCCEEEEcCCCC
Confidence 445554433 445555544443
No 257
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.55 E-value=0.00055 Score=48.59 Aligned_cols=74 Identities=23% Similarity=0.350 Sum_probs=49.0
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCC-eEEEEeCC--cccHHHHHHH---cCCcE-E--ecCCCHHHHHHh-------cCC
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAVER---LGADS-F--LVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~-~v~~~~~~--~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~~ 106 (220)
++++|.|+ +++|..+++.+...|. .|+++.++ .++.+.+..+ .+... + .|..+.+.+++. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46899997 9999999998888877 77888887 4444444333 34321 1 233444433322 248
Q ss_pred ccEEEEcCCCc
Q 027668 107 MDGIIDTVSAV 117 (220)
Q Consensus 107 ~d~vid~~g~~ 117 (220)
+|++|.++|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999998875
No 258
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.55 E-value=0.0018 Score=51.59 Aligned_cols=89 Identities=22% Similarity=0.357 Sum_probs=63.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (220)
.|++|.|+|.|.+|..+++.++.+|++|++.+++.... ....+|... .+ ..++....|+|+-++....
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~----~~---l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE--AEKELGAEY----RP---LEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcCCEe----cC---HHHHHhhCCEEEEeCCCChHHh
Confidence 57899999999999999999999999999998875432 223444421 12 3334457899999886543
Q ss_pred -cH-HHHHhccccCCEEEEecCC
Q 027668 119 -PL-MPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 119 -~~-~~~~~~l~~~g~iv~~g~~ 139 (220)
.+ ...+..++++..++.++..
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aRg 242 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTARG 242 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcCc
Confidence 12 3467788899888887653
No 259
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00063 Score=51.87 Aligned_cols=75 Identities=12% Similarity=0.215 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |++|..+++.+...|++|++++++.++.+.+.+++ +.. ...|-.+.+.+.++ .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999997 99999999999999999999999887666554443 321 12344454433322 2489
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999875
No 260
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.54 E-value=0.0011 Score=51.60 Aligned_cols=95 Identities=18% Similarity=0.142 Sum_probs=71.5
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
.++|+.......|+..+---.|++|.|+|. |.+|.-++.++...|+.|++..+.... .
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~---------------------l 196 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD---------------------A 196 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence 467776666666766553357999999997 699999999999999999988655431 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~ 139 (220)
++.....|+||-++|.+..+...+ +++|..++.+|..
T Consensus 197 ~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 197 KALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 233346899999999987665544 8899888888854
No 261
>PLN03139 formate dehydrogenase; Provisional
Probab=97.54 E-value=0.002 Score=52.15 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=64.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~- 120 (220)
.|++|.|+|.|.+|+.+++.++.+|++|++.+++....+.. ++.|+..+ . .+.++....|+|+.+.......
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~g~~~~---~---~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KETGAKFE---E---DLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhcCceec---C---CHHHHHhhCCEEEEeCCCCHHHH
Confidence 57899999999999999999999999999988764332222 34554322 1 2334445689999887653221
Q ss_pred ----HHHHhccccCCEEEEecCC
Q 027668 121 ----MPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 121 ----~~~~~~l~~~g~iv~~g~~ 139 (220)
...+..|+++..+|.++..
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNARG 293 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCCC
Confidence 2467788888888887753
No 262
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.54 E-value=0.0024 Score=48.79 Aligned_cols=74 Identities=19% Similarity=0.275 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc-HHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGII 111 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vi 111 (220)
.+++++|.|+ |.+|..+++.+...|++|+++.+..+. .+.+ +..+... ..|-.+.+.+.++ .+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-REKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-HhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4688999997 999999999999999999887665443 2233 3334322 2344454433322 24799999
Q ss_pred EcCCC
Q 027668 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
.++|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99876
No 263
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.54 E-value=0.0015 Score=49.93 Aligned_cols=75 Identities=16% Similarity=0.312 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCcEE---ecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF---LVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~~~ 107 (220)
+++++||.|+ |.+|..+++.+...|++|+++++++++.+++.++ .+.... .|-.+.+.+.+. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999997 9999999999999999999999988665554433 343321 244444433322 2468
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999876
No 264
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.53 E-value=0.0027 Score=50.18 Aligned_cols=95 Identities=25% Similarity=0.252 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHH-HCCC-eEEEEeCCcccHHHHHHHcC---CcEEecCCCHHHHHHhcCCccEEEEcCC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERLG---ADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~-~~g~-~v~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (220)
....+++|+|+|.+|...+..+. ..+. +|++..++.++.+.+++++. ..... ..+ ..+...+.|+|+.|++
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~~~---~~~av~~aDIVi~aT~ 198 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-VTD---LEAAVRQADIISCATL 198 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-eCC---HHHHHhcCCEEEEeeC
Confidence 45688999999999999987444 3565 89999999988888777653 22111 122 2233357999999887
Q ss_pred CcccHHHHHhccccCCEEEEecCCC
Q 027668 116 AVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 116 ~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
....+- --+.++++-.+..+|...
T Consensus 199 s~~pvl-~~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 199 STEPLV-RGEWLKPGTHLDLVGNFT 222 (314)
T ss_pred CCCCEe-cHHHcCCCCEEEeeCCCC
Confidence 653211 124678888777777643
No 265
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.52 E-value=0.0023 Score=48.86 Aligned_cols=75 Identities=20% Similarity=0.265 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (220)
+++++||.|+ +++|.++++.+...|++|+++++.+. +.....+..+... ..|-.+.+.++++ .+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999997 99999999999999999998877543 2222223444321 2355554444322 247999
Q ss_pred EEEcCCC
Q 027668 110 IIDTVSA 116 (220)
Q Consensus 110 vid~~g~ 116 (220)
+++++|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999875
No 266
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=97.51 E-value=0.0022 Score=49.46 Aligned_cols=137 Identities=20% Similarity=0.137 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCC-----------HHH-------HHH
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRD-----------QDE-------MQA 102 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~-----------~~~-------~~~ 102 (220)
.+...+++.|.|..|+.++..++..|+-|...+-...+.++. +.+|++..--.++ .+. +.+
T Consensus 162 v~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv-~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQV-ESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhh-hhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 466788999999999999999999999887777766665555 5677543321111 111 112
Q ss_pred hcCCccEEEEcCCCcc------cHHHHHhccccCCEEEEecCCC-CCc--ccCccccccCCcEEEEeeccCHHHHHHHHH
Q 027668 103 AMGTMDGIIDTVSAVH------PLMPLIGLLKSQGKLVLLGAPE-KPL--ELPAFPLLTGEKIVGGSLIGGLKETQEMID 173 (220)
Q Consensus 103 ~~~~~d~vid~~g~~~------~~~~~~~~l~~~g~iv~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 173 (220)
...++|+||.++--+. .....+..|++|+.+|.+.... +++ +.+..-...+++++.|......+.-...-+
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a~~aS~ 320 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLAAQASQ 320 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhhhhHHH
Confidence 2248999999874431 1356788999999999886654 333 333344567789998875533222233334
Q ss_pred HHHhC
Q 027668 174 FAAKH 178 (220)
Q Consensus 174 ~~~~~ 178 (220)
++.++
T Consensus 321 LYa~N 325 (356)
T COG3288 321 LYATN 325 (356)
T ss_pred HHHHH
Confidence 44443
No 267
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0018 Score=50.15 Aligned_cols=97 Identities=21% Similarity=0.329 Sum_probs=61.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc---EEecCCCHHHHHHh------cCCccEE
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA------MGTMDGI 110 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~------~~~~d~v 110 (220)
++.++|.|+|.+|..++..+. .|++|+++++++++.+.+.+++ |.. ...|-.+.+.+.+. .+++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 357788898999999999885 7999999999876655543333 322 12344454433322 2479999
Q ss_pred EEcCCCccc------------------HHHHHhccccCCEEEEecCCC
Q 027668 111 IDTVSAVHP------------------LMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 111 id~~g~~~~------------------~~~~~~~l~~~g~iv~~g~~~ 140 (220)
|+++|.... ++.+...++++|+++.+++..
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 999986421 223344555667777766543
No 268
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.51 E-value=0.00081 Score=51.32 Aligned_cols=76 Identities=25% Similarity=0.377 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHhc-------CCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~-------~~~ 107 (220)
.++++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+.+ |... ..|..+.+.+.++. +.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5689999997 99999999999989999999999877655443332 3211 12445544443322 378
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|++|.++|..
T Consensus 89 d~li~~ag~~ 98 (255)
T PRK07523 89 DILVNNAGMQ 98 (255)
T ss_pred CEEEECCCCC
Confidence 9999998863
No 269
>PRK06398 aldose dehydrogenase; Validated
Probab=97.50 E-value=0.0018 Score=49.62 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (220)
.|+++||.|+ |.+|..+++.+...|++|+++++++.... ... ...|-.+.+.+.++ .+++|++|+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999997 99999999999999999999988764321 111 12344454433322 247999999
Q ss_pred cCCC
Q 027668 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 79 ~Ag~ 82 (258)
T PRK06398 79 NAGI 82 (258)
T ss_pred CCCC
Confidence 9875
No 270
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0013 Score=50.50 Aligned_cols=77 Identities=19% Similarity=0.322 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcC-c-hHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH----cCCcEE----ecCCCHHHHHHh------
Q 027668 40 DKPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADSF----LVSRDQDEMQAA------ 103 (220)
Q Consensus 40 ~~~~~~vlI~G~-g-~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~------ 103 (220)
+.++++++|.|+ | ++|.++++.+...|++|++++++.++.+...++ ++...+ .|..+.+.+.++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 456789999996 6 799999999999999999998887665544332 343222 244444433322
Q ss_pred -cCCccEEEEcCCC
Q 027668 104 -MGTMDGIIDTVSA 116 (220)
Q Consensus 104 -~~~~d~vid~~g~ 116 (220)
.+.+|++|.++|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 2478999999985
No 271
>PRK05717 oxidoreductase; Validated
Probab=97.49 E-value=0.0012 Score=50.47 Aligned_cols=77 Identities=19% Similarity=0.315 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE---EecCCCHHHHHH----h---cCCccE
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA----A---MGTMDG 109 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~----~---~~~~d~ 109 (220)
..|++++|.|+ |.+|..+++.+...|++|++++++.++.+...+.++... ..|-.+.+.+.+ . .+.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35688999997 999999999999999999999887766555555555321 234444443322 2 236899
Q ss_pred EEEcCCCc
Q 027668 110 IIDTVSAV 117 (220)
Q Consensus 110 vid~~g~~ 117 (220)
+|.++|..
T Consensus 88 li~~ag~~ 95 (255)
T PRK05717 88 LVCNAAIA 95 (255)
T ss_pred EEECCCcc
Confidence 99998753
No 272
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00072 Score=51.61 Aligned_cols=76 Identities=21% Similarity=0.311 Sum_probs=53.8
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc---EEecCCCHHHHHH-------hcCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA-------AMGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~-------~~~~ 106 (220)
.++++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+.+.. ..+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 45688999997 99999999999999999999999877655554433 221 2234444443322 1247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 8999999875
No 273
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00075 Score=53.34 Aligned_cols=75 Identities=21% Similarity=0.205 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc----C-Cc---EEecCCCHHHHHHh-------cC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----G-AD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g-~~---~v~~~~~~~~~~~~-------~~ 105 (220)
.|++++|.|+ +++|..+++.+...|++|++++++.++.+++.+++ + .. ...|-.+.+.++++ .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4689999997 99999999999999999999999887665554433 1 11 12355555444332 23
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
.+|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 79999998875
No 274
>PRK06194 hypothetical protein; Provisional
Probab=97.48 E-value=0.0009 Score=52.03 Aligned_cols=76 Identities=20% Similarity=0.324 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHhc-------CCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~-------~~~ 107 (220)
.+.++||.|+ |.+|..+++.+...|++|++++++.+..++..+++ +... ..|..+.+.+.+.. +++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999997 99999999999999999999998876655544433 3221 12444444443322 368
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|++|.++|..
T Consensus 85 d~vi~~Ag~~ 94 (287)
T PRK06194 85 HLLFNNAGVG 94 (287)
T ss_pred CEEEECCCCC
Confidence 9999999863
No 275
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.48 E-value=0.00067 Score=54.05 Aligned_cols=77 Identities=21% Similarity=0.343 Sum_probs=50.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcc---------------------cHHH---HHHHcCCc----EEe
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---------------------KKSE---AVERLGAD----SFL 92 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~---------------------~~~~---~~~~~g~~----~v~ 92 (220)
.+.+|+|+|+|++|..++..+...|. ++++++.+.- |.+. ..++++.+ .+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 34789999999999999999999999 7887887631 1111 11233321 111
Q ss_pred cCCCHHHHHHhcCCccEEEEcCCCcc
Q 027668 93 VSRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 93 ~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
..-..+.+.++..++|+||||+.+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 103 TDVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred ccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 11123445566678999999998764
No 276
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.47 E-value=0.0013 Score=49.13 Aligned_cols=96 Identities=30% Similarity=0.367 Sum_probs=62.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHHH---HcCCcE--EecCCCHHHHHHhcCCccEEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVE---RLGADS--FLVSRDQDEMQAAMGTMDGII 111 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~~~~d~vi 111 (220)
.++++++||-+|+|. |..++.+++..+. +|+.++.+++..+.+.+ ++|.+. ++..+-.+.. .....||.|+
T Consensus 74 ~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~Ii 151 (215)
T TIGR00080 74 ELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDRIY 151 (215)
T ss_pred CCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCEEE
Confidence 378999999999874 7777778877654 69999998876555433 344321 2211111110 1113799998
Q ss_pred EcCCCcccHHHHHhccccCCEEEEe
Q 027668 112 DTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~g~iv~~ 136 (220)
-+...........+.|++||+++..
T Consensus 152 ~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 152 VTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred EcCCcccccHHHHHhcCcCcEEEEE
Confidence 6555555566788999999998865
No 277
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.47 E-value=0.0012 Score=51.61 Aligned_cols=98 Identities=27% Similarity=0.257 Sum_probs=62.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHc---CCc-EEecCCCHHHHHHhcCCccEEEEcC
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GAD-SFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~d~vid~~ 114 (220)
..++++||-+|+|+ |..++.+++ .|+ +|+.++.++...+.+.+.. +.. .+.... .+......+.||+|+...
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~-~~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL-IYLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-cccccccCCCceEEEEec
Confidence 46889999999987 877777665 566 8999999988666554332 221 111110 011111124899998654
Q ss_pred CCc---ccHHHHHhccccCCEEEEecCCC
Q 027668 115 SAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 115 g~~---~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
... ..+..+.+.|+++|.++..|...
T Consensus 234 ~~~~l~~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence 433 23455678999999999887643
No 278
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.47 E-value=0.0012 Score=52.17 Aligned_cols=71 Identities=23% Similarity=0.280 Sum_probs=53.6
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEe-cCCCHHHHHHhcCCccEEEEcCCC
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~d~vid~~g~ 116 (220)
+|+|.|+ |-+|..+++.+...|.+|++++++.++...+ ...+.+.+. |..+.+.+.+...++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence 6899997 9999999999999999999999986544333 334655443 445566666666789999998764
No 279
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=97.47 E-value=0.0013 Score=48.95 Aligned_cols=97 Identities=19% Similarity=0.178 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEe---------c-------CCCHHHHH-Hh
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL---------V-------SRDQDEMQ-AA 103 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~---------~-------~~~~~~~~-~~ 103 (220)
.++.+||+.|+|. |.-++-+|. .|.+|+.++-++...+.+.++.+..... . ..+..... ..
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 5778999999985 777777764 7999999999998877765544432110 0 00000000 11
Q ss_pred cCCccEEEEcCCCc--------ccHHHHHhccccCCEEEEecCC
Q 027668 104 MGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 104 ~~~~d~vid~~g~~--------~~~~~~~~~l~~~g~iv~~g~~ 139 (220)
.+.||.++|+.... ..++...+.|++||++++.+..
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 23589999976432 1356788899999997776654
No 280
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.00093 Score=51.00 Aligned_cols=76 Identities=25% Similarity=0.314 Sum_probs=54.0
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CC--c-EEecCCCHHHHHHh-------cCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D-SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~v~~~~~~~~~~~~-------~~~ 106 (220)
..+++++|.|+ |.+|..+++.+...|++|+++++++++.+.+...+ +. . ...|..+.+.+++. .+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45789999997 99999999999999999999999887765554432 21 1 12244444433322 247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 281
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0012 Score=50.30 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=53.1
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCC--c-EEecCCCHHHHHHhcC-CccEEEEcC
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGA--D-SFLVSRDQDEMQAAMG-TMDGIIDTV 114 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~--~-~v~~~~~~~~~~~~~~-~~d~vid~~ 114 (220)
++++||.|+ |.+|..+++.+...|++|++++++++....+.. ..+. . ...|..+.+.+.+... ++|++|.++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 467999997 999999999999999999999988765444322 2232 1 1235555555555444 899999998
Q ss_pred CC
Q 027668 115 SA 116 (220)
Q Consensus 115 g~ 116 (220)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 84
No 282
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.46 E-value=0.00084 Score=53.35 Aligned_cols=95 Identities=18% Similarity=0.278 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHH-HCCC-eEEEEeCCcccHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~-~~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (220)
+...+++|+|+|..|.+.+..+. ..+. +|.+..++.++.+.+++++ |.. +....+ ..+...+.|+|+.|+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~---~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD---PRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC---HHHHhccCCEEEEec
Confidence 44568999999999988888776 5776 8999999998877776655 433 211222 333345899999998
Q ss_pred CCcccHHHHHhccccCCEEEEecCCC
Q 027668 115 SAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 115 g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+....+- .-..++++-.+..+|...
T Consensus 203 ~s~~p~i-~~~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 203 PSETPIL-HAEWLEPGQHVTAMGSDA 227 (326)
T ss_pred CCCCcEe-cHHHcCCCcEEEeeCCCC
Confidence 7754221 123478888888887643
No 283
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.45 E-value=0.0014 Score=49.79 Aligned_cols=75 Identities=24% Similarity=0.449 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCc---EEecCCCHHHHHH----h---cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQA----A---MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~----~---~~~~ 107 (220)
+++++||.|+ |++|+.+++.+...|++|++++++.++.+.+.++ .+.. ...|-.+.+.+.+ . .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999997 9999999999999999999999987665554333 2332 1233344333322 1 2468
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|.+|.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999874
No 284
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0012 Score=49.52 Aligned_cols=71 Identities=23% Similarity=0.272 Sum_probs=52.9
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHHHHHHhc----CCccEEEEcCC
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAM----GTMDGIIDTVS 115 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~----~~~d~vid~~g 115 (220)
+++|.|+ |.+|..+++.+...|++|++++++.++.+.+.++.+...+ .|..+.+.+++.. +.+|++|+++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4789987 9999999999999999999999988777666566555432 3555555444332 36899999875
No 285
>PRK09186 flagellin modification protein A; Provisional
Probab=97.44 E-value=0.001 Score=50.73 Aligned_cols=74 Identities=23% Similarity=0.305 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc----CC---cE-EecCCCHHHHHHhc-------C
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GA---DS-FLVSRDQDEMQAAM-------G 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~---~~-v~~~~~~~~~~~~~-------~ 105 (220)
++++++|.|+ |.+|..++..+...|++|+++.+++++.+++.+++ +. .. ..|-.+.+.+.++. +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999997 99999999999999999999998877765554443 22 12 23555555443322 3
Q ss_pred CccEEEEcCC
Q 027668 106 TMDGIIDTVS 115 (220)
Q Consensus 106 ~~d~vid~~g 115 (220)
++|++|.+++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999985
No 286
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0028 Score=48.24 Aligned_cols=99 Identities=15% Similarity=0.212 Sum_probs=60.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEe-CCcccHHHHHHHc---CCcE---EecCCCHHHH-------HH----
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERL---GADS---FLVSRDQDEM-------QA---- 102 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~~~~~---g~~~---v~~~~~~~~~-------~~---- 102 (220)
.+++++|.|+ |.+|.++++.+...|++|++.. +..++.+....++ +... ..|-.+.+.+ .+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4688999997 9999999999999999998865 4444433332222 3211 1233332211 11
Q ss_pred hcC--CccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 103 AMG--TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 103 ~~~--~~d~vid~~g~~~-------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
..+ ++|++|.++|... ..+.+++.+++.|+++.++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 112 6999999988521 1123455566779999988754
No 287
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.001 Score=51.52 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |++|..+++.+...|++|++++++.++.+++.+++ |... ..|-.+.+.+.++ .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999997 99999999999999999999998877666554433 3221 2244444433322 2468
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|+++|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999885
No 288
>PLN02253 xanthoxin dehydrogenase
Probab=97.44 E-value=0.0015 Score=50.69 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC----c-EEecCCCHHHHHHh-------cCCcc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----D-SFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~-~v~~~~~~~~~~~~-------~~~~d 108 (220)
.++++||.|+ |.+|.++++.+...|++|+++++.++..+.+.++++. . ...|-.+.+.+.+. .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4688999997 9999999999988999999999887665555444432 1 12344554444332 24799
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
++|+++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999875
No 289
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.43 E-value=0.0017 Score=51.24 Aligned_cols=91 Identities=18% Similarity=0.255 Sum_probs=61.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (220)
.+|.|+|+|.+|...++.++..|. +|+++++++++.+.+ ++.|....... + ..+...+.|+||.|+.....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~-~---~~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTT-S---AAEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecC-C---HHHHhcCCCEEEECCCHHHHHH
Confidence 679999999999999999998885 899999988776665 45664211111 1 12223578999999987532
Q ss_pred -HHHHHhccccCCEEEEecCC
Q 027668 120 -LMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 120 -~~~~~~~l~~~g~iv~~g~~ 139 (220)
+......++++..++.+|..
T Consensus 82 v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHHHHhhCCCCCEEEeCccc
Confidence 22233455667766666653
No 290
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0057 Score=46.22 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=62.6
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc-HHHHH---HHcCCc-EE--ecCCCHHHHHHh-------cC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAV---ERLGAD-SF--LVSRDQDEMQAA-------MG 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~~---~~~g~~-~v--~~~~~~~~~~~~-------~~ 105 (220)
.++.+++|.|+ |.+|..+++.+...|++++++.++.+. .+.+. +..+.. .. .|-.+.+.+.+. .+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35688999997 999999999999999998887765432 22222 223321 11 233444333222 24
Q ss_pred CccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
++|++|.++|... .++.+++.++++|+++.++...
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 7999999988531 0123344555678999887643
No 291
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.43 E-value=0.00092 Score=53.00 Aligned_cols=75 Identities=20% Similarity=0.247 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC-----cE-EecCCCHHHHHHhc-------CCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-----DS-FLVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-----~~-v~~~~~~~~~~~~~-------~~~ 107 (220)
++++++|.|+ |.+|..+++.+...|++|++++++.++.+.+.++++. .. ..|-.+.+.++++. +++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4678999997 9999999999999999999999988776666555421 11 12444544433222 369
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|+++|.
T Consensus 85 D~li~nAg~ 93 (322)
T PRK07453 85 DALVCNAAV 93 (322)
T ss_pred cEEEECCcc
Confidence 999999873
No 292
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0034 Score=48.59 Aligned_cols=74 Identities=19% Similarity=0.274 Sum_probs=51.0
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCC----c-EEecCCCHHHHHH---h---cCCc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA----D-SFLVSRDQDEMQA---A---MGTM 107 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~----~-~v~~~~~~~~~~~---~---~~~~ 107 (220)
++++||.|+ |.+|..++..+...|++|++++++.+..+...+. .+. . ...|..+.+.+.. . .+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 568999997 9999999999999999999999887755444222 221 1 1224445443322 2 2478
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|+++.++|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999875
No 293
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0012 Score=50.38 Aligned_cols=75 Identities=23% Similarity=0.317 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE-E--ecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS-F--LVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~ 107 (220)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+++ +... . .|-.+.+.+.++ .+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 99999999999999999999999887766654433 3221 1 244444433322 2479
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999875
No 294
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.42 E-value=0.0049 Score=47.42 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=48.9
Q ss_pred CCCEEEEEcCc---hHHHHHHHHHHHCCCeEEEEeCCc---ccHHHHHHHcCCc--EEecCCCHHHHHHh-------cCC
Q 027668 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGAD--SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~g---~~G~~~~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~-------~~~ 106 (220)
.+++++|.|++ ++|.++++.+...|++|++..+++ +..+++..+.+.. ...|-.+.+.++++ .+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 57889999973 799999999999999999887763 1222332222321 22344554444322 246
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|+++|.
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999974
No 295
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.001 Score=50.04 Aligned_cols=75 Identities=21% Similarity=0.351 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCcEE-ecCCCHHHHHH-------hcCCccE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF-LVSRDQDEMQA-------AMGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~~~-------~~~~~d~ 109 (220)
+++++||.|+ |.+|..+++.+...|++|++++++.++.....++ .+...+ .|..+.+.+.+ ..+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4689999997 9999999999998999999999977654333222 233322 23344333322 2247999
Q ss_pred EEEcCCC
Q 027668 110 IIDTVSA 116 (220)
Q Consensus 110 vid~~g~ 116 (220)
+|.++|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998875
No 296
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.41 E-value=0.0028 Score=48.96 Aligned_cols=95 Identities=19% Similarity=0.202 Sum_probs=70.9
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
..+|+..+.+..++...---.|++|+|+|- ..+|.-++.+++..|+.|++..+.... +
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------L 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------H
Confidence 467776777777766553246999999997 569999999999999999887654221 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~ 139 (220)
++....+|++|.++|.+..+.. +.++++..++.+|..
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence 3334578999999999874433 678999999888854
No 297
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.40 E-value=0.0009 Score=49.73 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=29.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~ 75 (220)
...+|+|+|+|++|..++..+...|. ++++++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34789999999999999999999999 68888877
No 298
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.40 E-value=0.0019 Score=50.98 Aligned_cols=89 Identities=20% Similarity=0.301 Sum_probs=63.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~- 120 (220)
.|++|.|+|.|.+|..+++.++.+|++|++.+++.++.. +..... ..+.+.++....|+|+.+....+..
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 678999999999999999999999999999987653321 222221 1223445556789999888754321
Q ss_pred ----HHHHhccccCCEEEEecCC
Q 027668 121 ----MPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 121 ----~~~~~~l~~~g~iv~~g~~ 139 (220)
...+..|+++..+|.+|..
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aRG 228 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLARG 228 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCCc
Confidence 2356788888888888753
No 299
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0012 Score=50.46 Aligned_cols=75 Identities=20% Similarity=0.340 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc----CCc-EE--ecCCCHHHHHHhc---CCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD-SF--LVSRDQDEMQAAM---GTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~~---~~~d~v 110 (220)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.. .. .|-.+.+.+.+.. +.+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4689999997 89999999999999999999999877665543332 321 11 2444444444332 479999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|.++|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999875
No 300
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.40 E-value=0.0053 Score=47.61 Aligned_cols=77 Identities=26% Similarity=0.264 Sum_probs=57.6
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE-Ee-------cCCCHHHHHH----h---c
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FL-------VSRDQDEMQA----A---M 104 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~-------~~~~~~~~~~----~---~ 104 (220)
+|..+|+|.|. .++|++++.-++..|+.|.++.++.+++.++++.++... +. |-.+.+.+.. . .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 45578899875 899999999999999999999999999999988887422 11 1122333322 2 2
Q ss_pred CCccEEEEcCCCc
Q 027668 105 GTMDGIIDTVSAV 117 (220)
Q Consensus 105 ~~~d~vid~~g~~ 117 (220)
+.+|.+|.|+|..
T Consensus 111 ~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 111 GPIDNLFCCAGVA 123 (331)
T ss_pred CCcceEEEecCcc
Confidence 3789999999984
No 301
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.39 E-value=0.0018 Score=49.81 Aligned_cols=77 Identities=19% Similarity=0.274 Sum_probs=57.4
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC----C-cEEecCCCHH-------HHHHhcCCc
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----A-DSFLVSRDQD-------EMQAAMGTM 107 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~-~~v~~~~~~~-------~~~~~~~~~ 107 (220)
-.|+.|||.|+ +++|.+.++=+..+|+++++++...+..++..++.. + .++.|-.+.+ .+++..+.+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 36889999997 799999999888999999999998876666544443 2 3455655544 334444689
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|+++|.+|--
T Consensus 116 ~ILVNNAGI~ 125 (300)
T KOG1201|consen 116 DILVNNAGIV 125 (300)
T ss_pred eEEEeccccc
Confidence 9999998874
No 302
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.39 E-value=0.0029 Score=48.50 Aligned_cols=99 Identities=14% Similarity=0.180 Sum_probs=61.8
Q ss_pred CCCEEEEEcC---chHHHHHHHHHHHCCCeEEEEeCCcc--cHHHHHHHc----CCc--EEecCCCHHHHHHh-------
Q 027668 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAVERL----GAD--SFLVSRDQDEMQAA------- 103 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~~~~~~g~~v~~~~~~~~--~~~~~~~~~----g~~--~v~~~~~~~~~~~~------- 103 (220)
.+++++|.|+ +++|.++++.+...|++|+++.++.+ +.+...+++ +.. ...|-.+.+.+.++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 4688999996 48999999999999999988765432 222222222 211 12344454444322
Q ss_pred cCCccEEEEcCCCc-------c----------------------cHHHHHhccccCCEEEEecCCC
Q 027668 104 MGTMDGIIDTVSAV-------H----------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 104 ~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
.+++|++|+++|.. . ..+.++..++++|+++.++...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 24799999998742 1 1133555666779998887643
No 303
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.38 E-value=0.00052 Score=46.52 Aligned_cols=87 Identities=20% Similarity=0.333 Sum_probs=54.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCCeEEEEeC-CcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (220)
.-+|-|+|+|.+|..+...++..|..|..+.. +.+..+++...++...+.+. .+....+|++|-++... .+.
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDd-aI~ 82 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDD-AIA 82 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CC-HHH
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechH-HHH
Confidence 35789999999999999999999998887754 44455666555555444332 23345799999999997 577
Q ss_pred HHHhccccC-----CEEEEe
Q 027668 122 PLIGLLKSQ-----GKLVLL 136 (220)
Q Consensus 122 ~~~~~l~~~-----g~iv~~ 136 (220)
..+..|... |.++.-
T Consensus 83 ~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 83 EVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp HHHHHHHCC--S-TT-EEEE
T ss_pred HHHHHHHHhccCCCCcEEEE
Confidence 777777654 666543
No 304
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0013 Score=50.04 Aligned_cols=74 Identities=20% Similarity=0.313 Sum_probs=51.6
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc-EE--ecCCCHHHHHHh-------cCCcc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SF--LVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~~d 108 (220)
|++++|.|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ +.. .. .|-.+.+.+.++ .+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999997 89999999999999999999999877655553332 221 12 244444433322 24789
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
.+|+++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
No 305
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.002 Score=49.23 Aligned_cols=74 Identities=20% Similarity=0.263 Sum_probs=52.6
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC----c-EEecCCCHHHHHHh-------cCCccE
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----D-SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~-~v~~~~~~~~~~~~-------~~~~d~ 109 (220)
+.+++|.|+ |.+|..+++.+...|++|++++++.++.+.+.+++.. . ...|-.+.+.+.+. .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999997 9999999999999999999999988776665444421 1 12344444444322 236899
Q ss_pred EEEcCCC
Q 027668 110 IIDTVSA 116 (220)
Q Consensus 110 vid~~g~ 116 (220)
+|.++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999874
No 306
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.37 E-value=0.00083 Score=51.89 Aligned_cols=99 Identities=28% Similarity=0.289 Sum_probs=56.7
Q ss_pred hHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHH---HHcCCc--EEecCCCHHHHHHhcCCcc
Q 027668 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAV---ERLGAD--SFLVSRDQDEMQAAMGTMD 108 (220)
Q Consensus 34 l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~~g~~--~v~~~~~~~~~~~~~~~~d 108 (220)
+++. .++||++||-+|+| -|-.+..+++..|++|+.++.+++..+.+. ++.|.. ..+...+. +++...||
T Consensus 55 ~~~~-~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~---~~~~~~fD 129 (273)
T PF02353_consen 55 CEKL-GLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY---RDLPGKFD 129 (273)
T ss_dssp HTTT-T--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---GG---S-S
T ss_pred HHHh-CCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---cccCCCCC
Confidence 3444 48999999999987 477778888888999999999988655542 344421 11222222 22233889
Q ss_pred EEEE-----cCCCc---ccHHHHHhccccCCEEEEec
Q 027668 109 GIID-----TVSAV---HPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 109 ~vid-----~~g~~---~~~~~~~~~l~~~g~iv~~g 137 (220)
.|+. .+|.. ..++.+-+.|+|||++++-.
T Consensus 130 ~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 130 RIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp EEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred EEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8864 34432 12566788999999997543
No 307
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0018 Score=49.19 Aligned_cols=75 Identities=19% Similarity=0.288 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CC--c-EEecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D-SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~v~~~~~~~~~~~~-------~~~~ 107 (220)
.+.+++|.|+ |.+|..+++.+...|++|++++++++....+.+++ +. . ...|..+.+.+.+. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 99999999999999999999999876544443332 21 1 12344444433221 2478
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 308
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.35 E-value=0.0031 Score=49.08 Aligned_cols=95 Identities=17% Similarity=0.193 Sum_probs=70.0
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEc-CchHHHHHHHHHHHCCCeEEEEe-CCcccHHHHHHHcCCcEEecCCCHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERLGADSFLVSRDQDE 99 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G-~g~~G~~~~~~~~~~g~~v~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (220)
.++|+..+.+..|+...---.|++|+|+| .+.+|.-++.++...|+.|++.. ++. .
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~--------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-D--------------------- 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-C---------------------
Confidence 45666666666666554335799999999 59999999999999999999884 332 1
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
..+.....|+||-|+|.+..+...+ +++|..++.+|...
T Consensus 195 l~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin~ 233 (296)
T PRK14188 195 LPAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGINR 233 (296)
T ss_pred HHHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCcc
Confidence 1223346899999999987555443 88999999888643
No 309
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.35 E-value=0.0078 Score=41.56 Aligned_cols=96 Identities=15% Similarity=0.070 Sum_probs=68.9
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
.+++........++..+---.|++|+|+|. ..+|.-++.++...|+.|+++.+.....+
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-------------------- 66 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-------------------- 66 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence 355555555555655543357899999996 89999999999999999988875432222
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+.....|+|+-++|....+. -+.+++|..++.+|...
T Consensus 67 -~~v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 67 -SKVHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK 103 (140)
T ss_pred -HHHhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence 22346899999999886444 34589998888777644
No 310
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.35 E-value=0.0022 Score=48.30 Aligned_cols=74 Identities=16% Similarity=0.135 Sum_probs=51.3
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHHHHHH----h---cCCccEEEEc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQA----A---MGTMDGIIDT 113 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~----~---~~~~d~vid~ 113 (220)
++++||.|+ |.+|..+++.+...|++|++++++++......+..+...+ .|..+.+.+++ . .+++|++|.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 467999997 8999999999999999999999876544333344554322 24444333322 2 2369999999
Q ss_pred CCC
Q 027668 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
+|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 875
No 311
>PRK08589 short chain dehydrogenase; Validated
Probab=97.35 E-value=0.0016 Score=50.33 Aligned_cols=74 Identities=16% Similarity=0.318 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc---EEecCCCHHHHHH-------hcCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA-------AMGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~-------~~~~~ 107 (220)
+++++||.|+ +.+|..+++.+...|++|++++++ ++.+...+++ +.. ...|-.+.+.+.. ..+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5689999997 999999999999999999999988 5444443333 321 1234444433322 22478
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|+++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999875
No 312
>PRK08643 acetoin reductase; Validated
Probab=97.35 E-value=0.0015 Score=49.90 Aligned_cols=74 Identities=22% Similarity=0.348 Sum_probs=51.8
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCcc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~d 108 (220)
++++||.|+ |.+|..+++.+...|++|++++++.++.+.+..++ +... ..|-.+.+.+.+. .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 568999997 99999999999999999999999877655543332 2221 1244444433222 24799
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999875
No 313
>PRK07985 oxidoreductase; Provisional
Probab=97.35 E-value=0.007 Score=47.38 Aligned_cols=100 Identities=16% Similarity=0.104 Sum_probs=62.8
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc--cHHHHH---HHcCCc---EEecCCCHHHHHH-------hc
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAV---ERLGAD---SFLVSRDQDEMQA-------AM 104 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~--~~~~~~---~~~g~~---~v~~~~~~~~~~~-------~~ 104 (220)
..++++||.|+ |.+|..+++.+...|++|+++.++.. ..+++. ++.|.. ...|-.+.+.+.+ ..
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35678999997 99999999999999999998765432 222222 233432 1234444443322 22
Q ss_pred CCccEEEEcCCCcc--------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 105 GTMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 105 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+++|+++.++|... .++.++..++++|+++.++...
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 47899999887420 1223444556678999887653
No 314
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0019 Score=48.39 Aligned_cols=72 Identities=19% Similarity=0.237 Sum_probs=50.9
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-Cc-EEecCCCHHHHHHhc----C-CccEEEEcCC
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-AD-SFLVSRDQDEMQAAM----G-TMDGIIDTVS 115 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~~----~-~~d~vid~~g 115 (220)
++++|.|+ |.+|..+++.+...|++|+++++++++.+.+ ++++ .. ...|-.+.+.++++. + ++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899997 9999999999999999999999988766554 3333 22 123444544443322 2 6999999876
Q ss_pred C
Q 027668 116 A 116 (220)
Q Consensus 116 ~ 116 (220)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 5
No 315
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0021 Score=48.31 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCc---EEecCCCHHHHHHh-------cC-C
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MG-T 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~-~ 106 (220)
++++++|.|+ +++|.++++.+...|++|+++.++.++.+++.++ .+.. ...|..+.+.++++ .+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999997 8999999999999999999999988776655433 3432 12344454444322 24 6
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|+++|.
T Consensus 84 iD~li~nag~ 93 (227)
T PRK08862 84 PDVLVNNWTS 93 (227)
T ss_pred CCEEEECCcc
Confidence 9999999863
No 316
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.34 E-value=0.0037 Score=45.50 Aligned_cols=98 Identities=23% Similarity=0.259 Sum_probs=60.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHC-CCeEEEEeCCcccHHHHH---HHcCCcEE-ecCCCHHHHHHhcCCccEEEEc
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAV---ERLGADSF-LVSRDQDEMQAAMGTMDGIIDT 113 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~---~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~ 113 (220)
.++++.+||-+|+|+ |..++.+++.. +++|+.++.+++..+.+. ++.+.+.+ +-..+...... .+.||+|+-.
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~~ 119 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTSR 119 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEEc
Confidence 356689999999864 55556666544 569999999987554442 34454221 11112122211 2379999854
Q ss_pred CCC--cccHHHHHhccccCCEEEEecC
Q 027668 114 VSA--VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 114 ~g~--~~~~~~~~~~l~~~g~iv~~g~ 138 (220)
... ...+..+.+.|+++|+++.+-.
T Consensus 120 ~~~~~~~~l~~~~~~LkpGG~lv~~~~ 146 (187)
T PRK00107 120 AVASLSDLVELCLPLLKPGGRFLALKG 146 (187)
T ss_pred cccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 322 1345678889999999998744
No 317
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.33 E-value=0.0051 Score=46.91 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=61.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH-cCCcEE-ecCCC-HHHHHHhc-CCccEEEEcCCC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER-LGADSF-LVSRD-QDEMQAAM-GTMDGIIDTVSA 116 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-~g~~~v-~~~~~-~~~~~~~~-~~~d~vid~~g~ 116 (220)
.+.+|+|.|+ |.+|..+++.+...|++|+++.++.++....... .++..+ .|..+ .+.+.+.. .++|+||.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 3578999997 9999999998888999999998887654333221 123222 23333 23343434 489999988775
Q ss_pred ccc-------------HHHHHhcccc--CCEEEEecCC
Q 027668 117 VHP-------------LMPLIGLLKS--QGKLVLLGAP 139 (220)
Q Consensus 117 ~~~-------------~~~~~~~l~~--~g~iv~~g~~ 139 (220)
... ....++.++. .++++.++..
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 210 1233444433 3688887664
No 318
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.32 E-value=0.004 Score=47.08 Aligned_cols=75 Identities=20% Similarity=0.396 Sum_probs=50.4
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEE-eCCcccHHHHHHHc---CCcE-E--ecCCCHHHHHHhc-------CCc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GADS-F--LVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~~-------~~~ 107 (220)
++++||.|+ |.+|..++..+...|++++++ .++.++...+...+ +... + .|..+.+.+.+.. +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999997 999999999888889999988 87766554443322 2211 1 2444444433322 379
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|++|.++|..
T Consensus 85 d~vi~~ag~~ 94 (247)
T PRK05565 85 DILVNNAGIS 94 (247)
T ss_pred CEEEECCCcC
Confidence 9999988753
No 319
>PLN02928 oxidoreductase family protein
Probab=97.32 E-value=0.002 Score=51.58 Aligned_cols=95 Identities=19% Similarity=0.252 Sum_probs=62.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-----CcEEec-CCCHHHHHHhcCCccEEEEcCC
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----ADSFLV-SRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~~v~~-~~~~~~~~~~~~~~d~vid~~g 115 (220)
.|+++.|+|.|.+|+.+++.++.+|++|++.+++..+... ..++ .....+ ......+.++....|+|+.++.
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 5789999999999999999999999999999876332111 1111 000000 0112234455567899998876
Q ss_pred Ccc----cH-HHHHhccccCCEEEEecC
Q 027668 116 AVH----PL-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 116 ~~~----~~-~~~~~~l~~~g~iv~~g~ 138 (220)
... .+ ...+..|+++..+|.++.
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 432 12 356778899988888874
No 320
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0016 Score=49.55 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc--CCc-EE--ecCCCHHHHHHh-------cCCcc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GAD-SF--LVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~-------~~~~d 108 (220)
++++++|.|+ |.+|..+++.+...|++|+++.++.++.+.....+ +.. .. .|-.+.+.+++. .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999997 99999999988889999999999877655544433 321 11 244444444332 24799
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
.+|.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999985
No 321
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=97.32 E-value=0.0019 Score=48.29 Aligned_cols=95 Identities=18% Similarity=0.144 Sum_probs=59.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEe---------cCCC-----HHHH---HH
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL---------VSRD-----QDEM---QA 102 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~---------~~~~-----~~~~---~~ 102 (220)
..++.+||+.|+|. |.-++-+|. .|++|+.++.++...+.+.++.+..... .... .+.. ..
T Consensus 35 ~~~~~rvL~~gCG~-G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~ 112 (218)
T PRK13255 35 LPAGSRVLVPLCGK-SLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAA 112 (218)
T ss_pred CCCCCeEEEeCCCC-hHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcc
Confidence 35678999999874 776666664 8999999999998777765544432110 0000 0000 00
Q ss_pred hcCCccEEEEcCCCc--------ccHHHHHhccccCCEEEEe
Q 027668 103 AMGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 103 ~~~~~d~vid~~g~~--------~~~~~~~~~l~~~g~iv~~ 136 (220)
..+.||.|+|...-. ..+....+.|++||++.++
T Consensus 113 ~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 113 DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 113689999966422 1256678889999975543
No 322
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0049 Score=48.17 Aligned_cols=76 Identities=16% Similarity=0.243 Sum_probs=49.9
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc-HHHHH---HHcCCcE---EecCCCHHHHHHh-------cC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAV---ERLGADS---FLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~~---~~~g~~~---v~~~~~~~~~~~~-------~~ 105 (220)
.++.++||.|+ |.+|..+++.+...|++|+++.++.+. .+... +..+... ..|-.+.+.+.+. .+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45789999997 999999999998899999998887532 22221 2223322 1244444333222 24
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
++|++|.++|.
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 78999998875
No 323
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=97.32 E-value=0.0034 Score=46.80 Aligned_cols=44 Identities=30% Similarity=0.395 Sum_probs=34.7
Q ss_pred hHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc
Q 027668 34 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 34 l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~ 77 (220)
++....--.|.+|+|.|.|.+|+.+++.+...|++++.+..++.
T Consensus 14 ~~~~~~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 14 MKHLGDSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred HHHcCCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 33433224688999999999999999999999997777666655
No 324
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.31 E-value=0.0036 Score=47.18 Aligned_cols=75 Identities=19% Similarity=0.302 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSF---LVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~~~ 107 (220)
++.++||.|+ |.+|..+++.+...|.+|+++.+++++.+.... ..+.... .|..+.+.+.+. .+.+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999997 999999999999999999999998776544332 2233221 244444433222 2368
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|.+|.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999866
No 325
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.31 E-value=0.0023 Score=48.87 Aligned_cols=75 Identities=20% Similarity=0.328 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (220)
.++++||.|+ |.+|..+++.+...|++|++++++.++.+.+.++++... ..|-.+.+.+.+. .+.+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3578999997 999999999999999999999999887666655554221 1233344333322 2478999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|.++|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998874
No 326
>PLN03075 nicotianamine synthase; Provisional
Probab=97.31 E-value=0.0024 Score=49.58 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCC--CeEEEEeCCcccHHHHHHHcCC-----c-EEecCCCHHHHHHhcCCccEEEE
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLGA-----D-SFLVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g~-----~-~v~~~~~~~~~~~~~~~~d~vid 112 (220)
.+.++|+-+|+|+.++.++.+++.+. .+++.++.+++..+.+.+.+.. + -.+...+........++||+||-
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~ 201 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFL 201 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEE
Confidence 37799999999999998888887554 4799999998877666544421 1 11111121111111358999987
Q ss_pred cCC------C-cccHHHHHhccccCCEEEEec
Q 027668 113 TVS------A-VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 113 ~~g------~-~~~~~~~~~~l~~~g~iv~~g 137 (220)
.+- . ...++...+.|++||.++.=.
T Consensus 202 ~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 202 AALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred ecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 641 1 124677888999999998754
No 327
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.30 E-value=0.0032 Score=45.04 Aligned_cols=92 Identities=25% Similarity=0.366 Sum_probs=62.1
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEec--CCCHHHHHHhcCCccEEEEcCCCc--c-
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV--SRDQDEMQAAMGTMDGIIDTVSAV--H- 118 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~--~~~~~~~~~~~~~~d~vid~~g~~--~- 118 (220)
+|.|+|+ |-+|...++-++.+|.+|+++++++.+.... -+. .++. --+.+.+.+...|+|+||++.|.. +
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~-~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGV-TILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccc-eeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 5788997 9999999999999999999999998765332 121 1221 112334445556999999998876 1
Q ss_pred ------cHHHHHhccccC--CEEEEecCCC
Q 027668 119 ------PLMPLIGLLKSQ--GKLVLLGAPE 140 (220)
Q Consensus 119 ------~~~~~~~~l~~~--g~iv~~g~~~ 140 (220)
..+..+..++.. -|+..+|.-.
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 122355556552 4777777643
No 328
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.29 E-value=0.0026 Score=47.89 Aligned_cols=70 Identities=23% Similarity=0.367 Sum_probs=54.5
Q ss_pred EEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc--HHHHHHHcCCcEEe-cCCCHHHHHHhcCCccEEEEcCCC
Q 027668 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~--~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~d~vid~~g~ 116 (220)
|+|.|+ |.+|..+++.+...+.+|.+..|+..+ .+.+ +..|++.+. |..+.+.+.+...|+|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l-~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQL-QALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHH-HHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhh-hcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689997 999999999999988999999998742 3333 567886543 555677787778899999999884
No 329
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=97.29 E-value=0.012 Score=44.86 Aligned_cols=154 Identities=17% Similarity=0.162 Sum_probs=83.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCC----
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---- 116 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~---- 116 (220)
.++.+||-+|+|+ |..+..+++ .|.+++.++.+++..+.+.+.......+..+- +...-..+.||+|+....-
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDI-ESLPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCc-ccCcCCCCcEEEEEECchhhhcC
Confidence 4578899999875 665555544 68899999999887776644433222221111 1111111269999865432
Q ss_pred --cccHHHHHhccccCCEEEEecCCCCCcccCccccccC-CcEEEEeeccCHHHHHHHHHHHHhCCcceeE--EEEeccc
Q 027668 117 --VHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTG-EKIVGGSLIGGLKETQEMIDFAAKHNIRADI--EVIPADY 191 (220)
Q Consensus 117 --~~~~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~ 191 (220)
...+..+.+.|+++|.++......+...- ....+.. +..-.+....+.+++... +..-.+.... ....+++
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~e-l~~~~~~~~~~~~~~~~~~~~~l~~~---l~~~~~~~~~~~~~~~f~~ 193 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPE-LHQAWQAVDERPHANRFLPPDAIEQA---LNGWRYQHHIQPITLWFDD 193 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCCCCchHH-HHHHHHHhccCCccccCCCHHHHHHH---HHhCCceeeeeEEEEECCC
Confidence 12366778899999999987654332110 0000000 000111222343444443 3333344333 4667888
Q ss_pred HHHHHHHHHc
Q 027668 192 VNTAMERLAK 201 (220)
Q Consensus 192 i~~a~~~~~~ 201 (220)
..+.++.++.
T Consensus 194 ~~~~l~~lk~ 203 (251)
T PRK10258 194 ALSAMRSLKG 203 (251)
T ss_pred HHHHHHHHHH
Confidence 8888888864
No 330
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.29 E-value=0.0018 Score=48.83 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
.+.+++|.|+ |.+|..++..+...|++|+++++++++.++..+++ +... ..|..+.+.+.+. .+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999997 99999999999899999999999877655443332 3221 1233344433322 2479
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|.+|.++|..
T Consensus 86 d~vi~~ag~~ 95 (239)
T PRK07666 86 DILINNAGIS 95 (239)
T ss_pred cEEEEcCccc
Confidence 9999998753
No 331
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.29 E-value=0.0021 Score=49.11 Aligned_cols=76 Identities=22% Similarity=0.308 Sum_probs=53.6
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~ 106 (220)
.+++++||.|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.+++. .++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35689999997 99999999999999999999999877655543322 221 12344554444221 247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|.+|.++|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 332
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.002 Score=49.42 Aligned_cols=74 Identities=14% Similarity=0.265 Sum_probs=50.9
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCcc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~d 108 (220)
+.++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+. .+... ..|..+.+.+.+. .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899997 9999999999999999999999987655444332 23221 2244444433322 23789
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
++|.++|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999875
No 333
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.28 E-value=0.0028 Score=50.33 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCC--CeEEEEeCCcccHHHHHHHcC---CcE-EecCCCHHHHHHhcCCccEEEEcC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG---ADS-FLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g---~~~-v~~~~~~~~~~~~~~~~d~vid~~ 114 (220)
.|.+|||.|+ |.+|..+++.+...| .+|++.++++.+...+.+.++ ... ..|-.+.+.+.+...++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 4688999997 999999999888776 588888877654433333332 121 125556667766667899999998
Q ss_pred CC
Q 027668 115 SA 116 (220)
Q Consensus 115 g~ 116 (220)
|.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 75
No 334
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.28 E-value=0.002 Score=49.34 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=50.9
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE--EecCCCHHHHHHh-------cCCccEEE
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS--FLVSRDQDEMQAA-------MGTMDGII 111 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~-------~~~~d~vi 111 (220)
++||.|+ |++|..+++.+...|++|+++++++++.+++.+++ +... ..|-.+.+.++++ .+++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5899997 89999999999999999999999877665554433 2111 2344444433322 24799999
Q ss_pred EcCCC
Q 027668 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
+++|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99885
No 335
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.28 E-value=0.0013 Score=45.15 Aligned_cols=92 Identities=20% Similarity=0.327 Sum_probs=54.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccH-------------------H---HHHHHcC-CcEE--e-cCC
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK-------------------S---EAVERLG-ADSF--L-VSR 95 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~-------------------~---~~~~~~g-~~~v--~-~~~ 95 (220)
..+|+|+|+|++|..++..+-..|. ++++++.+.-+. + +..+++. ...+ + ..-
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999999999 788887752211 1 1111222 1111 1 111
Q ss_pred CHHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEE
Q 027668 96 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 134 (220)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv 134 (220)
..+...++..++|+||+|...........+..+..+.-.
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~ 120 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPF 120 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCE
Confidence 234444444589999999988653333444444444433
No 336
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.27 E-value=0.0016 Score=46.29 Aligned_cols=89 Identities=22% Similarity=0.327 Sum_probs=58.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (220)
.+|-++|.|.+|...++-+...|.+|++.++++++.+.+. +.|+..+ . + ..+.....|+||-|+.........
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~~--~-s---~~e~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEVA--D-S---PAEAAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEEE--S-S---HHHHHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhhh--h-h---hhhHhhcccceEeecccchhhhhh
Confidence 3678999999999999999999999999999998887774 4464433 2 1 222233569999999886544443
Q ss_pred ------HhccccCCEEEEecCC
Q 027668 124 ------IGLLKSQGKLVLLGAP 139 (220)
Q Consensus 124 ------~~~l~~~g~iv~~g~~ 139 (220)
+..++++..++.++..
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMSTI 96 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS-
T ss_pred hhhhHHhhccccceEEEecCCc
Confidence 3345556666666543
No 337
>PRK08017 oxidoreductase; Provisional
Probab=97.27 E-value=0.0033 Score=47.92 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=52.1
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHHHHHH----h---c-CCccEEEEc
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQA----A---M-GTMDGIIDT 113 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~----~---~-~~~d~vid~ 113 (220)
++++|.|+ |.+|+.+++.+...|++|++++++.++.+.+ +..+...+ .|..+.+.+.+ . . +.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 9999999999999999999999988776655 45565433 34444433222 1 2 368899988
Q ss_pred CCC
Q 027668 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 775
No 338
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0015 Score=51.37 Aligned_cols=76 Identities=26% Similarity=0.290 Sum_probs=52.3
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc-----CCc--E-EecCCCHHHHHHh-------c
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD--S-FLVSRDQDEMQAA-------M 104 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~--~-v~~~~~~~~~~~~-------~ 104 (220)
..+++++|.|+ |.+|..+++.+...|++|++++++.++.+.+.+++ +.. . ..|-.+.+.++++ .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 35689999997 99999999999989999999999876654433222 111 1 2244444443322 2
Q ss_pred CCccEEEEcCCC
Q 027668 105 GTMDGIIDTVSA 116 (220)
Q Consensus 105 ~~~d~vid~~g~ 116 (220)
+++|++|.++|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 379999999874
No 339
>PRK07069 short chain dehydrogenase; Validated
Probab=97.26 E-value=0.0051 Score=46.68 Aligned_cols=72 Identities=18% Similarity=0.279 Sum_probs=48.6
Q ss_pred EEEEcC-chHHHHHHHHHHHCCCeEEEEeCC-cccHHHHHHHcC----Cc----EEecCCCHHHHHHh-------cCCcc
Q 027668 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERLG----AD----SFLVSRDQDEMQAA-------MGTMD 108 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~~~~~g----~~----~v~~~~~~~~~~~~-------~~~~d 108 (220)
++|.|+ |.+|..+++.+...|++|++++++ .++.+.+.+++. .. ...|..+.+.+.+. .+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 788986 999999999999999999999987 554444433332 11 12244454433322 24789
Q ss_pred EEEEcCCCc
Q 027668 109 GIIDTVSAV 117 (220)
Q Consensus 109 ~vid~~g~~ 117 (220)
++|.++|..
T Consensus 82 ~vi~~ag~~ 90 (251)
T PRK07069 82 VLVNNAGVG 90 (251)
T ss_pred EEEECCCcC
Confidence 999998753
No 340
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0053 Score=46.71 Aligned_cols=75 Identities=15% Similarity=0.216 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEE-eCCcccHHHHHHHc---CCc-EE--ecCCCHHHHHH----hc-----
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GAD-SF--LVSRDQDEMQA----AM----- 104 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~----~~----- 104 (220)
.+.+++|.|+ |.+|..+++.+...|++|++. .++.++.+...+.+ +.. .+ .|-.+.+.+.+ ..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999997 999999999998899988775 56655444433332 221 11 24444433322 11
Q ss_pred ----CCccEEEEcCCC
Q 027668 105 ----GTMDGIIDTVSA 116 (220)
Q Consensus 105 ----~~~d~vid~~g~ 116 (220)
+++|++|.++|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 258999999876
No 341
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0029 Score=48.88 Aligned_cols=75 Identities=21% Similarity=0.349 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-----Cc-EE--ecCCCHHHHHHh-------cC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----AD-SF--LVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~-------~~ 105 (220)
+++++||.|+ |.+|..+++.+...|++|++++++.++.+...+++. .. .+ .|-.+.+.+.+. .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999997 999999999999999999999988765544433321 11 12 244444433222 23
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
++|++|.++|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 78999999874
No 342
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0027 Score=48.35 Aligned_cols=74 Identities=23% Similarity=0.360 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC-c---EEecCCCHHHHHHh-------cCCccE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-D---SFLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~---~v~~~~~~~~~~~~-------~~~~d~ 109 (220)
+++++||.|+ |.+|..+++.+...|++|++++++.+..... .+... . ...|-.+.+.+.++ .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVA-AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999997 9999999999999999999999886543322 33321 1 12344444433322 237899
Q ss_pred EEEcCCC
Q 027668 110 IIDTVSA 116 (220)
Q Consensus 110 vid~~g~ 116 (220)
+|.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999985
No 343
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.26 E-value=0.0035 Score=49.78 Aligned_cols=94 Identities=20% Similarity=0.263 Sum_probs=65.1
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHH-CCC-eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
-.+++|+|+|+ |.+|..+++.+.. .|. +++++.++.++...+.++++...+ ..+.+...+.|+|+-+++.+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence 46789999998 9999999998864 566 899999887777776666542211 12334445899999999876
Q ss_pred ccHHHHHhccccCCEEEEecCCC
Q 027668 118 HPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 118 ~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
..+..--..++++-.++.++.+.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 44312223456677777777764
No 344
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.26 E-value=0.0043 Score=46.88 Aligned_cols=75 Identities=24% Similarity=0.331 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (220)
++.+++|.|+ |.+|+.++..+...|+.|+...++.++.+.+...++... ..|-.+.+.+++. .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 999999999999999998888888777666655554321 1233444433322 2479999
Q ss_pred EEcCCC
Q 027668 111 IDTVSA 116 (220)
Q Consensus 111 id~~g~ 116 (220)
|.++|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999885
No 345
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.25 E-value=0.01 Score=43.48 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=59.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHC-CCeEEEEeCCcccHHHHHH---HcCCc--EEecCCCHHHHHHhcCCccEEEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVE---RLGAD--SFLVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~~~d~vid 112 (220)
.++++++||=+|+|. |..++.+++.. +.+|+.++.+++..+.+.+ +++.. .++..+..+........+|.++-
T Consensus 37 ~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~ 115 (196)
T PRK07402 37 RLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCI 115 (196)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEE
Confidence 467889998888763 55555566554 4699999999876655533 34532 23322222222233234455443
Q ss_pred cCCC--cccHHHHHhccccCCEEEEecC
Q 027668 113 TVSA--VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 113 ~~g~--~~~~~~~~~~l~~~g~iv~~g~ 138 (220)
..+. ...++.+.+.|+++|+++....
T Consensus 116 ~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 116 EGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred ECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 2222 1346778889999999988743
No 346
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.25 E-value=0.0013 Score=57.27 Aligned_cols=77 Identities=22% Similarity=0.360 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc--------------------cHHHHHHHcCCcEEecCCC-HH-
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAVERLGADSFLVSRD-QD- 98 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~--------------------~~~~~~~~~g~~~v~~~~~-~~- 98 (220)
..+++|+|+|+|+.|+.++..+...|.+|+++++.+. +.....+++|.+...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 3588999999999999999999999999999987543 0122335677654333211 01
Q ss_pred HHHHhcCCccEEEEcCCCc
Q 027668 99 EMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~ 117 (220)
.+.....+||.||.++|..
T Consensus 405 ~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 405 SLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 1222234799999999874
No 347
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.24 E-value=0.0016 Score=51.89 Aligned_cols=76 Identities=26% Similarity=0.426 Sum_probs=50.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcc---------------------cHHH---HHHHcCCcE-E--ec-
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---------------------KKSE---AVERLGADS-F--LV- 93 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~---------------------~~~~---~~~~~g~~~-v--~~- 93 (220)
..+|+|+|+|++|..++..+...|. ++.+++.+.- +.+. ..++++... + +.
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~ 103 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ 103 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 4789999999999999999999999 8888887631 1111 112333211 1 11
Q ss_pred CCCHHHHHHhcCCccEEEEcCCCcc
Q 027668 94 SRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 94 ~~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
.-..+...++..++|+|+||+.+..
T Consensus 104 ~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 104 DVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred cCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 1123444555678999999998874
No 348
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.24 E-value=0.0052 Score=47.53 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=69.8
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
.++|+..+....++...---.|++|+|+|. +.+|.-++.++...|+.|++..+... .+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------DL 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------CH
Confidence 456666666666665543357999999997 56699999999999999987543221 12
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
++.....|+|+-++|.+..+.. +.++++..++.+|...
T Consensus 196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~ 233 (285)
T PRK14189 196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence 2334578999999998865443 7789999999988643
No 349
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=97.23 E-value=0.006 Score=43.10 Aligned_cols=96 Identities=20% Similarity=0.311 Sum_probs=61.9
Q ss_pred cccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHH
Q 027668 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (220)
Q Consensus 21 a~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (220)
..++|+..+.+..++...---.|++|+|+|. ..+|.-++.+++..|+.|++........++
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~------------------ 75 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE------------------ 75 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc------------------
Confidence 4567776777777776553468999999996 789999999999999999887665433322
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 027668 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~ 139 (220)
.....|+||-++|.+..+. -+.++++..++.+|..
T Consensus 76 ---~~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 76 ---ITRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGIN 110 (160)
T ss_dssp ---HHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred ---eeeeccEEeeeeccccccc--cccccCCcEEEecCCc
Confidence 2346889999999886433 3467888888887764
No 350
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.22 E-value=0.0055 Score=44.63 Aligned_cols=99 Identities=20% Similarity=0.205 Sum_probs=58.7
Q ss_pred HhccCCCCCCEEEEEcCchHHHHHHHHHHHCC-CeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHH---HHHHhc--CCc
Q 027668 35 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSF-LVSRDQD---EMQAAM--GTM 107 (220)
Q Consensus 35 ~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~---~~~~~~--~~~ 107 (220)
++...+++|++||.+|+|+-+.......+..+ .++++++.++.. +..+...+ .+..+.+ .+.+.. +++
T Consensus 25 ~~~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 25 QKFKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKV 99 (188)
T ss_pred HHhcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCc
Confidence 34555789999999999875544333333333 389999988753 11233322 1332222 222222 279
Q ss_pred cEEEE-cC----CC------------cccHHHHHhccccCCEEEEecC
Q 027668 108 DGIID-TV----SA------------VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 108 d~vid-~~----g~------------~~~~~~~~~~l~~~g~iv~~g~ 138 (220)
|+|+. .. |. ...+..+.+.|+++|+++....
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 99995 22 22 1245667889999999998643
No 351
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.22 E-value=0.0042 Score=53.13 Aligned_cols=91 Identities=20% Similarity=0.196 Sum_probs=64.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCcccHH
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~~~~ 121 (220)
++++|+|.|.+|+.+++.++..|.++++++.++++.+++ ++.|...++ |..+++..++.. +.+|.++-++++.+...
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~ 496 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-RERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAG 496 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHH
Confidence 789999999999999999999999999999999888777 567876555 344455554432 38998887777653211
Q ss_pred ---HHHhccccCCEEEE
Q 027668 122 ---PLIGLLKSQGKLVL 135 (220)
Q Consensus 122 ---~~~~~l~~~g~iv~ 135 (220)
.+.+...+..+++.
T Consensus 497 ~iv~~~~~~~~~~~iia 513 (558)
T PRK10669 497 EIVASAREKRPDIEIIA 513 (558)
T ss_pred HHHHHHHHHCCCCeEEE
Confidence 23333444455544
No 352
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.22 E-value=0.0024 Score=50.62 Aligned_cols=75 Identities=21% Similarity=0.272 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---C----CcEE-ecCCCHHHHHHhcCCccEEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G----ADSF-LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g----~~~v-~~~~~~~~~~~~~~~~d~vid 112 (220)
.++++||.|+ |.+|..+++.+...|++|+++.++.++........ + ...+ .|-.+.+.+.+...++|+||.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 4689999997 99999999999999999988887765433321111 1 1111 244455556666668999999
Q ss_pred cCCC
Q 027668 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
+++.
T Consensus 84 ~A~~ 87 (325)
T PLN02989 84 TASP 87 (325)
T ss_pred eCCC
Confidence 9874
No 353
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.22 E-value=0.003 Score=50.70 Aligned_cols=75 Identities=21% Similarity=0.245 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC----Cc-EEecCCCHHHHHHhcC--CccEEEEc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----AD-SFLVSRDQDEMQAAMG--TMDGIIDT 113 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~~~--~~d~vid~ 113 (220)
++.+|||.|+ |.+|..+++.+...|.+|+++++++.......+.++ .. ...|-.+.+.+.++.. ++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4688999997 999999999999999999999887664332222222 22 1224455555555544 68999999
Q ss_pred CCC
Q 027668 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 874
No 354
>PRK05855 short chain dehydrogenase; Validated
Probab=97.22 E-value=0.0044 Score=53.04 Aligned_cols=76 Identities=22% Similarity=0.245 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
.+.++||.|+ |.+|..+++-+...|++|++++++.++.+++.+. .|... ..|-.+.+.+.++ .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4578999997 9999999999999999999999987766554332 23211 1344454443322 2469
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|++|+++|..
T Consensus 394 d~lv~~Ag~~ 403 (582)
T PRK05855 394 DIVVNNAGIG 403 (582)
T ss_pred cEEEECCccC
Confidence 9999999863
No 355
>PRK06720 hypothetical protein; Provisional
Probab=97.22 E-value=0.0034 Score=44.92 Aligned_cols=76 Identities=21% Similarity=0.268 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHH-------hcCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA-------AMGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~-------~~~~~ 107 (220)
++..++|.|+ +++|..++..+...|++|++++++.+..+...+++ +... ..|..+.+.+.+ ..+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999997 78999999999899999999998876554443332 4221 223334333322 12478
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|++|+++|..
T Consensus 95 DilVnnAG~~ 104 (169)
T PRK06720 95 DMLFQNAGLY 104 (169)
T ss_pred CEEEECCCcC
Confidence 8999888753
No 356
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0027 Score=48.27 Aligned_cols=75 Identities=20% Similarity=0.308 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc-EE--ecCCCHHHHHH-------hcCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SF--LVSRDQDEMQA-------AMGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~-------~~~~~ 107 (220)
++++++|.|+ |.+|..+++.+...|++|+.++++.++.+.+.+++ +.. .. .|..+.+.+.+ ..+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999997 99999999999999999999999876655554432 321 11 24444433322 22468
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|+++.++|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999874
No 357
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.21 E-value=0.0022 Score=47.25 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=30.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~ 75 (220)
...+|+|+|+|++|..++..+...|. ++++++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34789999999999999999999999 78888887
No 358
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0031 Score=48.22 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=51.5
Q ss_pred CCCCCEEEEEcC-chHHHHHHHHHHHCC-CeEEEEeCCccc-HHHHHHHc---CC-c-EE--ecCCCHHH----HHHhc-
Q 027668 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSK-KSEAVERL---GA-D-SF--LVSRDQDE----MQAAM- 104 (220)
Q Consensus 40 ~~~~~~vlI~G~-g~~G~~~~~~~~~~g-~~v~~~~~~~~~-~~~~~~~~---g~-~-~v--~~~~~~~~----~~~~~- 104 (220)
+..+++|||.|+ |++|..+++-+...| ++|+++++++++ .+.+.+++ +. . .+ .|..+.+. +++..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456789999997 999999999877775 899999998775 55443333 32 1 11 34444332 22222
Q ss_pred -CCccEEEEcCCCc
Q 027668 105 -GTMDGIIDTVSAV 117 (220)
Q Consensus 105 -~~~d~vid~~g~~ 117 (220)
+++|++|.++|..
T Consensus 85 ~g~id~li~~ag~~ 98 (253)
T PRK07904 85 GGDVDVAIVAFGLL 98 (253)
T ss_pred cCCCCEEEEeeecC
Confidence 4799999887663
No 359
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=97.21 E-value=0.0091 Score=40.48 Aligned_cols=91 Identities=14% Similarity=0.349 Sum_probs=59.6
Q ss_pred EEEEcC-chHHHHHHHHHHHCC--CeEEEEeC--CcccHHHHHHHcCCcEEecCCCH--HHHH-----------------
Q 027668 46 VGVVGL-GGLGHVAVKFAKAMG--VKVTVIST--SPSKKSEAVERLGADSFLVSRDQ--DEMQ----------------- 101 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~~~~~~g--~~v~~~~~--~~~~~~~~~~~~g~~~v~~~~~~--~~~~----------------- 101 (220)
|.|+|+ |++|..+.++.+.+. .+|+...- +-+.+.+.+++|....+.-.++. +.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578898 999999999999987 46665444 33356666678887776554432 2222
Q ss_pred ---Hhc--CCccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 027668 102 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 102 ---~~~--~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~ 136 (220)
++. ..+|+|+.+..+...+.-.+..++.+-++.+.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA 120 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA 120 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence 211 27999999886666788888888877776653
No 360
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.20 E-value=0.0021 Score=48.77 Aligned_cols=76 Identities=26% Similarity=0.442 Sum_probs=48.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHH----------------------HHHcCCc-EE--ec-CC
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA----------------------VERLGAD-SF--LV-SR 95 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~----------------------~~~~g~~-~v--~~-~~ 95 (220)
+.+|+|+|+|++|..++..+...|. ++++++.+.-+...+ .++++.. .+ ++ .-
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i 103 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL 103 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 3789999999999999999999999 777777653221111 1122211 11 11 11
Q ss_pred CHHHHHHhcCCccEEEEcCCCcc
Q 027668 96 DQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
+.+...++..++|+||||..+..
T Consensus 104 ~~~~~~~~~~~~DlVvd~~D~~~ 126 (240)
T TIGR02355 104 DDAELAALIAEHDIVVDCTDNVE 126 (240)
T ss_pred CHHHHHHHhhcCCEEEEcCCCHH
Confidence 12344455568999999999875
No 361
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.20 E-value=0.0018 Score=46.65 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=28.3
Q ss_pred EEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCc
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~ 76 (220)
+|+|+|+|++|..+++.+...|. ++++++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 48999999999999999999999 688888775
No 362
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.19 E-value=0.0056 Score=40.71 Aligned_cols=90 Identities=19% Similarity=0.281 Sum_probs=60.9
Q ss_pred EEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCcccHHH-
Q 027668 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHPLMP- 122 (220)
Q Consensus 46 vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~~~~~- 122 (220)
|+|+|.|.+|..+++.++..+.++++++.++++.+.+ ++.|...+. +..+.+.+++.. ..++.++-+++....-..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEEL-REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-HhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence 5789999999999999999666999999999887777 456665443 334455555543 389999988887642222
Q ss_pred --HHhccccCCEEEEe
Q 027668 123 --LIGLLKSQGKLVLL 136 (220)
Q Consensus 123 --~~~~l~~~g~iv~~ 136 (220)
..+.+.+..+++..
T Consensus 80 ~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 80 ALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHTTTSEEEEE
T ss_pred HHHHHHHCCCCeEEEE
Confidence 23334455566543
No 363
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0039 Score=48.16 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=52.7
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEEEE
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~vid 112 (220)
+++||.|+ |.+|..+++.+...|++|+++.++.+..+.+.+..+... ..|..+.+.+.+. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57899997 999999999999999999999998877666644444221 2344444433322 247899999
Q ss_pred cCCCc
Q 027668 113 TVSAV 117 (220)
Q Consensus 113 ~~g~~ 117 (220)
++|..
T Consensus 83 ~ag~~ 87 (276)
T PRK06482 83 NAGYG 87 (276)
T ss_pred CCCCC
Confidence 98753
No 364
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.19 E-value=0.0029 Score=48.19 Aligned_cols=34 Identities=41% Similarity=0.638 Sum_probs=29.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~ 75 (220)
...+|+|+|+|++|..++..+...|. ++++++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 34789999999999999999999998 77777665
No 365
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.18 E-value=0.01 Score=44.94 Aligned_cols=76 Identities=22% Similarity=0.271 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeC-CcccHHHHHH---HcCCcEE---ecCCCHHHHHH-------hcCC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVE---RLGADSF---LVSRDQDEMQA-------AMGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~-~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~-------~~~~ 106 (220)
+++.++|.|+ |.+|..+++.+...|+++++... ...+.+...+ ..+.... .|..+.+.+.+ ..++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999997 99999999999999998887543 3333222222 2343322 34444433322 2247
Q ss_pred ccEEEEcCCCc
Q 027668 107 MDGIIDTVSAV 117 (220)
Q Consensus 107 ~d~vid~~g~~ 117 (220)
+|++|.++|..
T Consensus 82 id~li~~ag~~ 92 (246)
T PRK12938 82 IDVLVNNAGIT 92 (246)
T ss_pred CCEEEECCCCC
Confidence 99999999863
No 366
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.18 E-value=0.0042 Score=46.63 Aligned_cols=74 Identities=16% Similarity=0.268 Sum_probs=58.9
Q ss_pred EEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH-HcCCcEE-ecCCCHHHHHHhc-CCccEEEEcCCCcc
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE-RLGADSF-LVSRDQDEMQAAM-GTMDGIIDTVSAVH 118 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~-~~~d~vid~~g~~~ 118 (220)
.++|+|+|.+|..+++.+...|..|+++++++++..+... +++...+ .+..+.+.++++. ..+|.++=++|...
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 5789999999999999999999999999999998777433 4565444 3555667776663 48999999999864
No 367
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.18 E-value=0.0063 Score=48.19 Aligned_cols=118 Identities=18% Similarity=0.267 Sum_probs=74.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc-c--
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-P-- 119 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-~-- 119 (220)
|+++-|+|.|.+|+.+++.++.+|.+|++.++...+. .. ...+... . +.+.++....|++...+.-.+ +
T Consensus 142 gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~-~~-~~~~~~~---~---~~Ld~lL~~sDiv~lh~PlT~eT~g 213 (324)
T COG0111 142 GKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRE-RA-GVDGVVG---V---DSLDELLAEADILTLHLPLTPETRG 213 (324)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchh-hh-cccccee---c---ccHHHHHhhCCEEEEcCCCCcchhc
Confidence 7899999999999999999999999999999943321 11 1112111 1 224444456788887665432 1
Q ss_pred -H-HHHHhccccCCEEEEecCCCCCcccCccccccCCcEEEEeeccCHHHHHHHHHHHHhCCccee-EEEEecccH
Q 027668 120 -L-MPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEKIVGGSLIGGLKETQEMIDFAAKHNIRAD-IEVIPADYV 192 (220)
Q Consensus 120 -~-~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~i 192 (220)
+ ...+..|+++..++.++...- -+-..+++.+++|.+.-. +++|+-|-.
T Consensus 214 ~i~~~~~a~MK~gailIN~aRG~v------------------------Vde~aL~~AL~~G~i~gA~lDVf~~EPl 265 (324)
T COG0111 214 LINAEELAKMKPGAILINAARGGV------------------------VDEDALLAALDSGKIAGAALDVFEEEPL 265 (324)
T ss_pred ccCHHHHhhCCCCeEEEECCCcce------------------------ecHHHHHHHHHcCCcceEEecCCCCCCC
Confidence 1 345667888887777654321 134566677777776633 355544433
No 368
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0033 Score=48.01 Aligned_cols=75 Identities=21% Similarity=0.281 Sum_probs=53.4
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC---CcE-EecCCCHHHHHHhc-------CCccEE
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---ADS-FLVSRDQDEMQAAM-------GTMDGI 110 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~~-v~~~~~~~~~~~~~-------~~~d~v 110 (220)
+++++|.|+ |.+|..++..+...|++|++++++.++.+.+.+.+. ... ..|..+.+.+.... +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999997 999999999988899999999998877666655442 221 23444544443221 369999
Q ss_pred EEcCCCc
Q 027668 111 IDTVSAV 117 (220)
Q Consensus 111 id~~g~~ 117 (220)
|.+.|..
T Consensus 82 i~~ag~~ 88 (257)
T PRK07074 82 VANAGAA 88 (257)
T ss_pred EECCCCC
Confidence 9999753
No 369
>PRK12743 oxidoreductase; Provisional
Probab=97.18 E-value=0.014 Score=44.51 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=48.4
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHH---HHcCCcE-E--ecCCCHHHHHH-------hcCCc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAV---ERLGADS-F--LVSRDQDEMQA-------AMGTM 107 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~---~~~g~~~-v--~~~~~~~~~~~-------~~~~~ 107 (220)
++++||.|+ |.+|+.+++.+...|++|+++.+.+. +.+.+. +..|... . .|-.+.+.++. ..+.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999997 89999999999999999988765433 332222 2344321 1 34444443322 22478
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999875
No 370
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.18 E-value=0.003 Score=48.51 Aligned_cols=75 Identities=17% Similarity=0.279 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |.+|..++..+...|++|+++.+++++.+.+...+ |... ..|-.+.+.+.++ .+.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5688999997 99999999988899999999998877655543333 4321 2344454443332 2468
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|.+|.++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999886
No 371
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=97.18 E-value=0.0089 Score=41.81 Aligned_cols=97 Identities=20% Similarity=0.325 Sum_probs=58.5
Q ss_pred EEEEEcCchHHHHHHHHHHH-CCCeEEEEeCC--cccHHHHHH---HcCC---cE-------Ee--------cCCCHHHH
Q 027668 45 HVGVVGLGGLGHVAVKFAKA-MGVKVTVISTS--PSKKSEAVE---RLGA---DS-------FL--------VSRDQDEM 100 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~-~g~~v~~~~~~--~~~~~~~~~---~~g~---~~-------v~--------~~~~~~~~ 100 (220)
+|.|+|.|.+|..+++.+.. .+.+++++... .+....+.+ ..|. +. ++ ...++..+
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~ 81 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL 81 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence 57899999999999988775 45677766552 222222222 1121 10 11 11122233
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~~ 141 (220)
.+-.-++|+|+||+|.-.....+...++.|.+-|+++.+..
T Consensus 82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~ 122 (149)
T smart00846 82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAK 122 (149)
T ss_pred cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCC
Confidence 22223899999999886555667788888878888877643
No 372
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.18 E-value=0.0035 Score=49.54 Aligned_cols=85 Identities=20% Similarity=0.273 Sum_probs=60.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (220)
.|+++.|+|.|.+|..++++++.+|++|+..++.... ..... . ..+.++....|+|+-+....+.
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~------~~~~~----~---~~l~ell~~sDiv~l~~Plt~~T~ 212 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGAS------VCREG----Y---TPFEEVLKQADIVTLHCPLTETTQ 212 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCccc------ccccc----c---CCHHHHHHhCCEEEEcCCCChHHh
Confidence 4689999999999999999999999999988754321 11111 1 1244445578999887764321
Q ss_pred --H-HHHHhccccCCEEEEecCC
Q 027668 120 --L-MPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 120 --~-~~~~~~l~~~g~iv~~g~~ 139 (220)
+ ...+..|+++..++.++..
T Consensus 213 ~li~~~~l~~mk~ga~lIN~aRG 235 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGRG 235 (314)
T ss_pred cccCHHHHHhCCCCeEEEECCCc
Confidence 2 3577889999999988753
No 373
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.18 E-value=0.0087 Score=46.28 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=69.3
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcCc-hHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g-~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
.++|+..+....|+...---.|++|+|+|.| .+|.-++.++...|+.|++....... +
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~---------------------l 194 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD---------------------L 194 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH---------------------H
Confidence 4566766666666655422479999999975 99999999999999998876433211 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~ 139 (220)
.+....+|+|+-++|.+..+. -+.+++|..++.+|..
T Consensus 195 ~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 195 SFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence 233457899999999987543 3456899999998864
No 374
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.18 E-value=0.0029 Score=47.97 Aligned_cols=76 Identities=22% Similarity=0.333 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCcE-E--ecCCCHHHHHHhc-------CCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADS-F--LVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~~-------~~~ 107 (220)
.++++||.|+ |.+|..+++.+...|++|++++++.++...+.+ ..+... + .|-.+.+.+.+.. +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 999999999999999999999998654443322 223211 1 2444444333322 378
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|.+|.++|..
T Consensus 85 d~vi~~ag~~ 94 (251)
T PRK12826 85 DILVANAGIF 94 (251)
T ss_pred CEEEECCCCC
Confidence 9999998663
No 375
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.17 E-value=0.0034 Score=50.04 Aligned_cols=94 Identities=19% Similarity=0.302 Sum_probs=62.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHH-CCC-eEEEEeCCcccHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (220)
+...+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++ |.. +....+ ..+...+.|+|+.|+
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 344689999999999887776664 565 8999999988887776654 333 211222 233335789999998
Q ss_pred CCcccHHHHHhccccCCEEEEecCC
Q 027668 115 SAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 115 g~~~~~~~~~~~l~~~g~iv~~g~~ 139 (220)
+....+-.. ..++++-.+..+|..
T Consensus 206 ~s~~p~i~~-~~l~~g~~v~~vg~d 229 (330)
T PRK08291 206 PSEEPILKA-EWLHPGLHVTAMGSD 229 (330)
T ss_pred CCCCcEecH-HHcCCCceEEeeCCC
Confidence 765432211 236777778777764
No 376
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0035 Score=47.35 Aligned_cols=76 Identities=12% Similarity=0.210 Sum_probs=52.4
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCc--E-EecCCCHHHHHHh-------cCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD--S-FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~--~-v~~~~~~~~~~~~-------~~~ 106 (220)
..+++++|.|+ |.+|+.+++.+...|++|+++++++++.+++.+. .+.. . ..|-.+.+.+... .++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34578999997 9999999999999999999999987765554332 2221 1 2244444433222 246
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 377
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.17 E-value=0.0026 Score=55.04 Aligned_cols=92 Identities=17% Similarity=0.321 Sum_probs=66.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCcccH
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHPL 120 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~~~ 120 (220)
.++|+|+|.|.+|+.+++.++..|.++++++.++++.+.+ +++|...++ |..+.+..++.. +.+|.++-++++.+.-
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~n 478 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTS 478 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHHH
Confidence 3689999999999999999999999999999999988777 667876444 444556555443 3899999999886533
Q ss_pred HHH---HhccccCCEEEE
Q 027668 121 MPL---IGLLKSQGKLVL 135 (220)
Q Consensus 121 ~~~---~~~l~~~g~iv~ 135 (220)
... .+.+.|.-+++.
T Consensus 479 ~~i~~~ar~~~p~~~iia 496 (621)
T PRK03562 479 LQLVELVKEHFPHLQIIA 496 (621)
T ss_pred HHHHHHHHHhCCCCeEEE
Confidence 233 233344544443
No 378
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.16 E-value=0.0031 Score=51.18 Aligned_cols=77 Identities=23% Similarity=0.361 Sum_probs=51.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC-------------------cccHHHHHHHc---CC-cEEecC---
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-------------------PSKKSEAVERL---GA-DSFLVS--- 94 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~-------------------~~~~~~~~~~~---g~-~~v~~~--- 94 (220)
.+.+|+|+|+|++|..++..+...|. ++++++.+ ..|.+.+.+.+ .. ..+...
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 55789999999999999999999999 78888876 22323222222 21 111111
Q ss_pred CCHHHHHHhcCCccEEEEcCCCcc
Q 027668 95 RDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 95 ~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
-+.+...++..++|+||||+.+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 122344445568999999999864
No 379
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=97.16 E-value=0.0072 Score=48.72 Aligned_cols=59 Identities=25% Similarity=0.314 Sum_probs=45.1
Q ss_pred ccccccchhhhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc
Q 027668 18 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 77 (220)
Q Consensus 18 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~ 77 (220)
.+|-+....+.+- .++.....--.|.+|.|.|.|.+|+.+++.+...|++|++++.+..
T Consensus 183 ~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 183 SEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred CcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 4444455554443 5555554224899999999999999999999999999999999877
No 380
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.15 E-value=0.0056 Score=51.27 Aligned_cols=86 Identities=16% Similarity=0.293 Sum_probs=58.9
Q ss_pred hhhhhhhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCC
Q 027668 27 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGT 106 (220)
Q Consensus 27 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 106 (220)
+.....++++...-..+.+++|+|+|++|.+++..+...|++++++.++.++.+.+.+.++... +... .... ...
T Consensus 316 ~~G~~~~l~~~~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~-~~~~---~~~~-l~~ 390 (477)
T PRK09310 316 GEGLFSLLKQKNIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA-FPLE---SLPE-LHR 390 (477)
T ss_pred HHHHHHHHHhcCCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce-echh---Hhcc-cCC
Confidence 3334445544332245789999999999999999999999999999988877777666554321 2111 1111 247
Q ss_pred ccEEEEcCCCc
Q 027668 107 MDGIIDTVSAV 117 (220)
Q Consensus 107 ~d~vid~~g~~ 117 (220)
+|+||+|++..
T Consensus 391 ~DiVInatP~g 401 (477)
T PRK09310 391 IDIIINCLPPS 401 (477)
T ss_pred CCEEEEcCCCC
Confidence 89999998765
No 381
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=97.15 E-value=0.0041 Score=46.40 Aligned_cols=93 Identities=29% Similarity=0.354 Sum_probs=59.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHH---HHcCCcEEecCCCH--HHHHHhcCCccEEEE----
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAV---ERLGADSFLVSRDQ--DEMQAAMGTMDGIID---- 112 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~~g~~~v~~~~~~--~~~~~~~~~~d~vid---- 112 (220)
+|.+||=+|||+ |++..-+| ..|+.|+.++-+++..+.+. .+-|.. +++... +.+....+.||+|+.
T Consensus 59 ~g~~vLDvGCGg-G~Lse~mA-r~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEVl 134 (243)
T COG2227 59 PGLRVLDVGCGG-GILSEPLA-RLGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEVL 134 (243)
T ss_pred CCCeEEEecCCc-cHhhHHHH-HCCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhHH
Confidence 889999999864 55555444 47899999999988766653 122323 334432 222222248999974
Q ss_pred -cCCCcc-cHHHHHhccccCCEEEEecC
Q 027668 113 -TVSAVH-PLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 113 -~~g~~~-~~~~~~~~l~~~g~iv~~g~ 138 (220)
-+..+. .+..+.++++|+|.+.....
T Consensus 135 EHv~dp~~~~~~c~~lvkP~G~lf~STi 162 (243)
T COG2227 135 EHVPDPESFLRACAKLVKPGGILFLSTI 162 (243)
T ss_pred HccCCHHHHHHHHHHHcCCCcEEEEecc
Confidence 233332 35568889999999877543
No 382
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0025 Score=48.50 Aligned_cols=75 Identities=21% Similarity=0.266 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+ +.+... ..|..+.+.+.+. .+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999997 999999999999999999999998765544433 233221 1244444333222 2478
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999875
No 383
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.14 E-value=0.0033 Score=47.96 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=52.9
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCC--cE-EecCCCHHHHHHh-------cCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGA--DS-FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~--~~-v~~~~~~~~~~~~-------~~~ 106 (220)
-++++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+ +.+. .. ..|..+.+.+.+. .+.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 35789999997 999999999888899999999998765544433 2342 21 2244444433222 236
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|.+|.++|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 384
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=97.14 E-value=0.0051 Score=49.37 Aligned_cols=87 Identities=14% Similarity=0.061 Sum_probs=57.2
Q ss_pred hhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHH----HHHHcC------CcEEe-cCCC
Q 027668 29 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE----AVERLG------ADSFL-VSRD 96 (220)
Q Consensus 29 ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~~g------~~~v~-~~~~ 96 (220)
|||.-++..-. -..++|||.|+ |-+|..++..+...|.+|+++++....... .....+ ...+. |-.+
T Consensus 2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 56776654443 34578999997 999999999999999999999876432111 111111 11222 4444
Q ss_pred HHHHHHhcCCccEEEEcCCC
Q 027668 97 QDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~ 116 (220)
.+.+.+...++|+||.+++.
T Consensus 81 ~~~l~~~~~~~d~ViHlAa~ 100 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAAL 100 (348)
T ss_pred HHHHHHHhhCCCEEEECccc
Confidence 55555555689999998864
No 385
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.14 E-value=0.0035 Score=48.46 Aligned_cols=75 Identities=23% Similarity=0.341 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
++++++|.|+ |.+|+.+++.+...|++|++++++.++.+.+.+++ +... ..|..+.+.+... .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999997 99999999999999999999999876655544332 3221 1234444333222 2479
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999999873
No 386
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0033 Score=48.04 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=52.5
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCe-EEEEeCCcccHHHHHH---HcCCc---EEecCCCHHHHHHh-------cC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVE---RLGAD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~-------~~ 105 (220)
..+++++|.|+ |.+|..+++.+...|++ |++++++.++...... ..+.. ...|..+.+.+.+. .+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35688999997 99999999999999997 9999888665443322 23432 12344554443332 24
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
++|.+|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999985
No 387
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0036 Score=47.46 Aligned_cols=74 Identities=20% Similarity=0.304 Sum_probs=51.1
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc-----CCc-E--EecCCCHHHHHH-------hcCC
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD-S--FLVSRDQDEMQA-------AMGT 106 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~-------~~~~ 106 (220)
+++++|.|+ |.+|..+++.+...|++|+++++++++.+.+...+ +.. . ..|..+.+.+.+ ..++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999997 99999999988889999999999887655543322 211 1 124444443322 2247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 388
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.13 E-value=0.0048 Score=49.12 Aligned_cols=86 Identities=22% Similarity=0.291 Sum_probs=60.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (220)
.|.+|.|+|.|.+|..+++.++..|.+|++.+++....... .. .. ....+.....|+|+.++.....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence 56789999999999999999999999999999876432211 01 10 1233444578999988876531
Q ss_pred ---HHHHHhccccCCEEEEecC
Q 027668 120 ---LMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 ---~~~~~~~l~~~g~iv~~g~ 138 (220)
....+..++++..+|.++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 1235567788888877764
No 389
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.13 E-value=0.0037 Score=47.77 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHH---HHcCCc---EEecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAV---ERLGAD---SFLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~---~~~g~~---~v~~~~~~~~~~~~-------~~~~ 107 (220)
.++++||.|+ |.+|..+++.+...|++|+++.++ ++.+.+. .+.+.. ...|-.+.+.+.+. .+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999997 999999999999999999999887 3333332 233422 12344444433322 2478
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999999875
No 390
>PRK10637 cysG siroheme synthase; Provisional
Probab=97.13 E-value=0.022 Score=47.48 Aligned_cols=117 Identities=10% Similarity=-0.006 Sum_probs=73.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
-.|.+|||+|+|.++.-=++.+...|++|+++...-. ....+. ..|.-..+. ++. ......++++||-|++....
T Consensus 10 l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~-~~~~i~~~~-~~~--~~~dl~~~~lv~~at~d~~~ 85 (457)
T PRK10637 10 LRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWA-DAGMLTLVE-GPF--DESLLDTCWLAIAATDDDAV 85 (457)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-hCCCEEEEe-CCC--ChHHhCCCEEEEECCCCHHH
Confidence 3578999999999998888888889999988875432 233332 223222222 111 11223589999999999864
Q ss_pred HHHHHhccccCCEEEEecCCCCCcccCccccc-cCCcEEEEee
Q 027668 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL-TGEKIVGGSL 161 (220)
Q Consensus 120 ~~~~~~~l~~~g~iv~~g~~~~~~~~~~~~~~-~~~~~i~~~~ 161 (220)
-.......+..|.++.........+|-.+..+ .+.+++.-+.
T Consensus 86 n~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT 128 (457)
T PRK10637 86 NQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSS 128 (457)
T ss_pred hHHHHHHHHHcCcEEEECCCcccCeEEEeeEEecCCEEEEEEC
Confidence 44555556677888887665544454444433 3456665443
No 391
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.13 E-value=0.0075 Score=50.63 Aligned_cols=72 Identities=25% Similarity=0.277 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCccc----HHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (220)
..+++|+|+|+|.+|+.++..++..|.+|++++..+.. .....++.|......... . ...++|.||-+.|.
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~-~----~~~~~D~Vv~s~Gi 88 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP-T----LPEDTDLVVTSPGW 88 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc-c----ccCCCCEEEECCCc
Confidence 35679999999999999999999999999998866431 112235567664433221 1 22368999988887
Q ss_pred c
Q 027668 117 V 117 (220)
Q Consensus 117 ~ 117 (220)
+
T Consensus 89 ~ 89 (480)
T PRK01438 89 R 89 (480)
T ss_pred C
Confidence 5
No 392
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=97.12 E-value=0.0093 Score=39.85 Aligned_cols=87 Identities=21% Similarity=0.316 Sum_probs=58.6
Q ss_pred EEEEEcCchHHHHHHHHHHHC--CCeEE-EEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027668 45 HVGVVGLGGLGHVAVKFAKAM--GVKVT-VISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~--g~~v~-~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (220)
++.|+|+|..|..-..-++.. +.+++ ++++++++.+.+.+++|.. .+. +.+.+-+. ..+|+|+-++.......
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~~--~~~~ll~~-~~~D~V~I~tp~~~h~~ 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VYT--DLEELLAD-EDVDAVIIATPPSSHAE 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EES--SHHHHHHH-TTESEEEEESSGGGHHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-chh--HHHHHHHh-hcCCEEEEecCCcchHH
Confidence 578999999998888766655 44766 4455555666677788887 432 22222211 27999999999886677
Q ss_pred HHHhccccCCEEEEe
Q 027668 122 PLIGLLKSQGKLVLL 136 (220)
Q Consensus 122 ~~~~~l~~~g~iv~~ 136 (220)
.+..+++.|- -+++
T Consensus 78 ~~~~~l~~g~-~v~~ 91 (120)
T PF01408_consen 78 IAKKALEAGK-HVLV 91 (120)
T ss_dssp HHHHHHHTTS-EEEE
T ss_pred HHHHHHHcCC-EEEE
Confidence 7777777665 4444
No 393
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.12 E-value=0.0033 Score=43.64 Aligned_cols=31 Identities=42% Similarity=0.549 Sum_probs=27.3
Q ss_pred EEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~ 75 (220)
+|+|+|+|++|..++..+...|. ++++++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 47899999999999999999999 78877765
No 394
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.12 E-value=0.0088 Score=48.16 Aligned_cols=93 Identities=13% Similarity=0.328 Sum_probs=64.7
Q ss_pred CEEEEEcC-chHHHHHHHHHHHC--CCeEEEEe--CCcccHHHHHHHcCCcEEecCCCH--HHHHH--------------
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAVERLGADSFLVSRDQ--DEMQA-------------- 102 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~--g~~v~~~~--~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~-------------- 102 (220)
++|.|+|+ |++|..++...+.. .++|++.+ ++.+++.+.+++|+...+.-.++. ..+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 47899996 99999999988765 45777775 445567777788998766543321 12221
Q ss_pred ----hcC--CccEEEEcCCCcccHHHHHhccccCCEEEEe
Q 027668 103 ----AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 103 ----~~~--~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~ 136 (220)
+.. .+|+|+.+.++...+.-.+..++.|-++.+.
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 111 5899999987765677788888877776663
No 395
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.12 E-value=0.0062 Score=55.18 Aligned_cols=96 Identities=19% Similarity=0.224 Sum_probs=68.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHC-CCe-------------EEEEeCCcccHHHHHHHc-CCc-EEecCCCHHHHHHhcC
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAM-GVK-------------VTVISTSPSKKSEAVERL-GAD-SFLVSRDQDEMQAAMG 105 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~-g~~-------------v~~~~~~~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~~~ 105 (220)
..++|+|+|+|.+|...++.+... +++ |.+.+.+.++.+.+.+.+ ++. ..+|..+.+.+.+...
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 456899999999999999988754 334 777777776666666666 443 2345667777776666
Q ss_pred CccEEEEcCCCcccHHHHHhccccCCEEEEec
Q 027668 106 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 106 ~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g 137 (220)
++|+|+.|++..-....+..+++.+-.++...
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek 679 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTAS 679 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEECc
Confidence 79999999998655556666777666665443
No 396
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.11 E-value=0.0029 Score=50.20 Aligned_cols=44 Identities=18% Similarity=0.287 Sum_probs=38.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER 85 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~ 85 (220)
.|++++|.|+ |++|.++++.+...|++|+++++++++.+.+.++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~ 96 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS 96 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Confidence 4789999997 8999999998888999999999998877665443
No 397
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.11 E-value=0.0055 Score=49.23 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=54.0
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc--C--CcEE-ecCCCHHHHHHhcCCccEEEEcC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--G--ADSF-LVSRDQDEMQAAMGTMDGIIDTV 114 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g--~~~v-~~~~~~~~~~~~~~~~d~vid~~ 114 (220)
..+.+|||.|+ |.+|..+++.+...|.+|++++++.++.+.+...+ + ...+ .|-.+.+.+.+...++|.||.++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 45678999996 99999999999999999999888765544433332 1 1211 23344556666666899999988
Q ss_pred CC
Q 027668 115 SA 116 (220)
Q Consensus 115 g~ 116 (220)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 64
No 398
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=97.10 E-value=0.0056 Score=47.33 Aligned_cols=88 Identities=17% Similarity=0.260 Sum_probs=58.4
Q ss_pred CEEEEEcCchHHHHHHHHHHH--CCCeEE-EEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027668 44 MHVGVVGLGGLGHVAVKFAKA--MGVKVT-VISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~--~g~~v~-~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (220)
-+|.|+|.|.+|...++.+.. .+.++. +.++++++.+.+.+++|....+ .+.+ ++...+|+|+.|++.....
T Consensus 7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~--~~~e---ell~~~D~Vvi~tp~~~h~ 81 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV--VPLD---QLATHADIVVEAAPASVLR 81 (271)
T ss_pred eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc--CCHH---HHhcCCCEEEECCCcHHHH
Confidence 578999999999988887765 367776 4455555655666666743232 2222 2334689999999987555
Q ss_pred HHHHhccccCCEEEEe
Q 027668 121 MPLIGLLKSQGKLVLL 136 (220)
Q Consensus 121 ~~~~~~l~~~g~iv~~ 136 (220)
+.....++.|..++..
T Consensus 82 e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 82 AIVEPVLAAGKKAIVL 97 (271)
T ss_pred HHHHHHHHcCCcEEEe
Confidence 5566777776656543
No 399
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.10 E-value=0.0055 Score=46.48 Aligned_cols=75 Identities=21% Similarity=0.264 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHHHHcCCc---EEecCCCHHHHHH-------hcCCccE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGAD---SFLVSRDQDEMQA-------AMGTMDG 109 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~---~v~~~~~~~~~~~-------~~~~~d~ 109 (220)
.++++||.|+ |.+|..+++.+...|++|+++++++. +.....++.+.. ...|..+.+.+.+ ..+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999997 99999999999999999999988652 112222344432 1224444443332 1247999
Q ss_pred EEEcCCC
Q 027668 110 IIDTVSA 116 (220)
Q Consensus 110 vid~~g~ 116 (220)
+|.++|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999876
No 400
>PRK14967 putative methyltransferase; Provisional
Probab=97.08 E-value=0.0077 Score=45.18 Aligned_cols=92 Identities=26% Similarity=0.213 Sum_probs=59.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHH---HcCCcE-EecCCCHHHHHHhc-CCccEEEEc
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE---RLGADS-FLVSRDQDEMQAAM-GTMDGIIDT 113 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~~-~~~d~vid~ 113 (220)
++++++||-.|+|. |..++.+++. |. +++.++.++...+.+.+ ..+... +++.+-.+ ... +.||+|+..
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~---~~~~~~fD~Vi~n 108 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWAR---AVEFRPFDVVVSN 108 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhh---hccCCCeeEEEEC
Confidence 67889999999987 8888888775 66 99999999876554432 233322 22222111 122 379999965
Q ss_pred CCCcc---------------------------cHHHHHhccccCCEEEEe
Q 027668 114 VSAVH---------------------------PLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 114 ~g~~~---------------------------~~~~~~~~l~~~g~iv~~ 136 (220)
.+... .+..+.+.|+++|+++++
T Consensus 109 pPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 109 PPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred CCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 32110 134567889999998865
No 401
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=97.08 E-value=0.0057 Score=48.44 Aligned_cols=95 Identities=16% Similarity=0.211 Sum_probs=60.9
Q ss_pred EEEEEcCchHHHHHHHHHHHCC----CeEEEEeCCccc--HHHHHHHcCC--------------cE--------EecCCC
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMG----VKVTVISTSPSK--KSEAVERLGA--------------DS--------FLVSRD 96 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g----~~v~~~~~~~~~--~~~~~~~~g~--------------~~--------v~~~~~ 96 (220)
+|.|+|.|.+|..+.+.+...+ .++..+..-.+. ...+. +++. .. ++..++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll-~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLL-RYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHH-hhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 3779999999999999988764 566666542221 11121 2221 01 111122
Q ss_pred HHHHHHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 97 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
++.+.+...++|+||+|+|.......+...++.|++.|.++.+.
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~ 123 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPG 123 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCC
Confidence 23332222389999999999877778888999998999888763
No 402
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0056 Score=46.19 Aligned_cols=43 Identities=23% Similarity=0.319 Sum_probs=36.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE 84 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~ 84 (220)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~ 48 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD 48 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH
Confidence 4678999997 999999999999999999999999876655433
No 403
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.07 E-value=0.006 Score=45.93 Aligned_cols=97 Identities=23% Similarity=0.281 Sum_probs=66.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHHHHc---CCcEEecCCCHHHHHHhc--CCccEEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAM--GTMDGII 111 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~--~~~d~vi 111 (220)
.+.||++|+=.|.|+ |-+++-+++..|. +|+.....++..+.+.+++ |....+.....| +.+.. +.+|.+|
T Consensus 91 gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D-v~~~~~~~~vDav~ 168 (256)
T COG2519 91 GISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD-VREGIDEEDVDAVF 168 (256)
T ss_pred CCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc-ccccccccccCEEE
Confidence 479999999888775 8888889988876 8999999988766665544 322111111111 11111 2799987
Q ss_pred EcCCC-cccHHHHHhccccCCEEEEec
Q 027668 112 DTVSA-VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 112 d~~g~-~~~~~~~~~~l~~~g~iv~~g 137 (220)
--... ...++.+.+.|++||.++.+.
T Consensus 169 LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 169 LDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 54444 456788999999999998874
No 404
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.06 E-value=0.0042 Score=47.39 Aligned_cols=75 Identities=19% Similarity=0.315 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~ 107 (220)
.+++++|.|+ |.+|..+++.+...|+++++++++.++.+.+..+ .+... ..|..+.+.+.+. .+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999997 9999999999999999999999887765544332 23221 2344454443322 2478
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999875
No 405
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.05 E-value=0.011 Score=45.57 Aligned_cols=96 Identities=16% Similarity=0.234 Sum_probs=69.9
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
.++|+....+..++...---.|++|+|+|- ..+|.-++.+++..|+.|++..+... .+
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~---------------------~L 189 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE---------------------NL 189 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh---------------------HH
Confidence 456666666666666543357899999996 59999999999999998888765432 13
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
.+....+|++|.++|.+..+...+ +++|..++.+|...
T Consensus 190 ~~~~~~ADIvI~Avgk~~lv~~~~--vk~GavVIDVgi~~ 227 (279)
T PRK14178 190 KAELRQADILVSAAGKAGFITPDM--VKPGATVIDVGINQ 227 (279)
T ss_pred HHHHhhCCEEEECCCcccccCHHH--cCCCcEEEEeeccc
Confidence 333457899999999775544333 79999999998753
No 406
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.05 E-value=0.0096 Score=46.05 Aligned_cols=96 Identities=15% Similarity=0.230 Sum_probs=70.0
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
.++|+..+....|+...---.|++|+|+|. |.+|.-++.++...|+.|++...... ..
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 456666666666665543357999999996 99999999999999999987632211 12
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
++.....|+||-++|.+..+...| +++|..++.+|...
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~~--ik~GavVIDvgin~ 233 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKEF--VKEGAVVIDVGMNR 233 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHHH--ccCCcEEEEeccee
Confidence 233446899999999987665544 88998888888643
No 407
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.05 E-value=0.015 Score=44.50 Aligned_cols=76 Identities=18% Similarity=0.202 Sum_probs=50.1
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHH---HHcCCc---EEecCCCHHHHHHh-------cC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAV---ERLGAD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~---~~~g~~---~v~~~~~~~~~~~~-------~~ 105 (220)
-++++++|.|+ |.+|..+++.+...|++++++.++++ ..+.+. +..+.. ...|-.+.+.+.++ .+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35789999997 99999999999999999888877543 222222 222322 12344554443322 23
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
++|+++.++|.
T Consensus 85 ~id~lv~~ag~ 95 (261)
T PRK08936 85 TLDVMINNAGI 95 (261)
T ss_pred CCCEEEECCCC
Confidence 78999999885
No 408
>PRK08317 hypothetical protein; Provisional
Probab=97.04 E-value=0.0051 Score=46.31 Aligned_cols=100 Identities=27% Similarity=0.351 Sum_probs=63.0
Q ss_pred cCCCCCCEEEEEcCchHHHHHHHHHHHCC--CeEEEEeCCcccHHHHHHHc---CCcEEecCCCHHHHHHhcCCccEEEE
Q 027668 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 38 ~~~~~~~~vlI~G~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~vid 112 (220)
..+.++++||.+|+|. |..+..+++..+ .+++.++.++...+.+.+.. +....+...+........+.||.|+-
T Consensus 15 ~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 93 (241)
T PRK08317 15 LAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRS 93 (241)
T ss_pred cCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEEEE
Confidence 3468899999999976 888888888774 58999999887665553331 11111111111111111237898875
Q ss_pred cCCC------cccHHHHHhccccCCEEEEecC
Q 027668 113 TVSA------VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 113 ~~g~------~~~~~~~~~~l~~~g~iv~~g~ 138 (220)
.... ...+..+.+.|+++|.++....
T Consensus 94 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 94 DRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred echhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 4221 1246678889999999988764
No 409
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0037 Score=48.13 Aligned_cols=72 Identities=22% Similarity=0.312 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vid 112 (220)
.+++++|.|+ |.+|..+++.+...|++|++++++.++.+.. .+... ..|..+.+.+++. .+.+|++|.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999997 9999999999999999999999886543221 23322 2355555444332 247899999
Q ss_pred cCCC
Q 027668 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9986
No 410
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.03 E-value=0.0046 Score=49.24 Aligned_cols=91 Identities=21% Similarity=0.233 Sum_probs=63.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc-------CCc---EEecCCCHHHHHHhcCCccEEEEc
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-------GAD---SFLVSRDQDEMQAAMGTMDGIIDT 113 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~-------g~~---~v~~~~~~~~~~~~~~~~d~vid~ 113 (220)
-+|.|+|+|.+|...+..+...|.+|.++++++++.+.+.+.- |.. .+....+ ..+.....|+||-|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD---PEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEEE
Confidence 3689999999999999999999999999999877666654321 210 0111111 22233578999999
Q ss_pred CCCcccHHHHHhccccCCEEEEecC
Q 027668 114 VSAVHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 114 ~g~~~~~~~~~~~l~~~g~iv~~g~ 138 (220)
+.... +...++.++++-.++.+..
T Consensus 82 v~~~~-~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 82 VPSKA-LRETLAGLPRALGYVSCAK 105 (328)
T ss_pred CchHH-HHHHHHhcCcCCEEEEEee
Confidence 98884 6777788887766665533
No 411
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=97.03 E-value=0.0059 Score=48.44 Aligned_cols=88 Identities=19% Similarity=0.263 Sum_probs=59.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHH-HCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~-~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (220)
.|+++.|+|.|.+|+.+++.++ .+|++|+..++.... .....++...+ + +.++....|+|.-+....+
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~--~~~~~~~~~~~----~---l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHK--EAEERFNARYC----D---LDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCch--hhHHhcCcEec----C---HHHHHHhCCEEEEeCCCChHH
Confidence 5689999999999999999998 999999987765322 11134444321 1 3344456788877665432
Q ss_pred --cH-HHHHhccccCCEEEEecC
Q 027668 119 --PL-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 119 --~~-~~~~~~l~~~g~iv~~g~ 138 (220)
.+ ...+..|+++..+|.++.
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~aR 237 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAGR 237 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECCC
Confidence 11 246777888888877764
No 412
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.03 E-value=0.0057 Score=48.44 Aligned_cols=75 Identities=21% Similarity=0.253 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---C----CcEE-ecCCCHHHHHHhcCCccEEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G----ADSF-LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g----~~~v-~~~~~~~~~~~~~~~~d~vid 112 (220)
.|++|||.|+ |.+|..+++.+...|.+|+++.++..+.+.....+ + ...+ .|..+.+.+.+...++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4689999997 99999999999989999998888765433221111 1 1211 233344556666668999999
Q ss_pred cCCC
Q 027668 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
+++.
T Consensus 84 ~A~~ 87 (322)
T PLN02986 84 TASP 87 (322)
T ss_pred eCCC
Confidence 8874
No 413
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.03 E-value=0.0067 Score=47.91 Aligned_cols=85 Identities=28% Similarity=0.348 Sum_probs=55.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (220)
.|+++.|+|-|.+|+.++++++.+|++|++.++..... ..+... ..+.++....|+|+-++...+
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~~~-------~~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEYER-------VSLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCcee-------ecHHHHhhcCCEEEEeCCCCchhh
Confidence 57899999999999999999999999999998753211 111111 123334445677766654321
Q ss_pred -cH-HHHHhccccCCEEEEecC
Q 027668 119 -PL-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 119 -~~-~~~~~~l~~~g~iv~~g~ 138 (220)
.+ ...+..|+++..+|.++.
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aR 233 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGR 233 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCC
Confidence 11 245667777777777654
No 414
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.03 E-value=0.0047 Score=47.20 Aligned_cols=74 Identities=18% Similarity=0.184 Sum_probs=50.6
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH----cC---CcE-EecCCCHHHHHHh-------cCC
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LG---ADS-FLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g---~~~-v~~~~~~~~~~~~-------~~~ 106 (220)
++++||.|+ |.+|..+++.+...|++|+.++++.++.+...++ .+ ... ..|-.+.+.+... .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 9999999999999999999999887655444332 22 111 1244444333322 247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|.+|.++|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 415
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.02 E-value=0.016 Score=43.95 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=61.2
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCc-ccHHHH---HHHcCCc-E--EecCCCHHHHHH-------hcCC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEA---VERLGAD-S--FLVSRDQDEMQA-------AMGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~-~~~~~~---~~~~g~~-~--v~~~~~~~~~~~-------~~~~ 106 (220)
.+.++||.|+ |.+|..+++-+...|+++++..++. +..... .+..+.. . ..|..+.+.+.. ..++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 3578999997 9999999999889999987766543 222221 1233322 1 124444433322 1247
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHhccccCCEEEEecCCC
Q 027668 107 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
+|.+|.++|... ..+.+.+.+++.|+++.++...
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 899999998411 0223445556778999887754
No 416
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.02 E-value=0.0055 Score=46.57 Aligned_cols=74 Identities=22% Similarity=0.290 Sum_probs=51.3
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc--E-EecCCCHHHH-------HHhcCCcc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--S-FLVSRDQDEM-------QAAMGTMD 108 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~-v~~~~~~~~~-------~~~~~~~d 108 (220)
++++||.|+ |.+|..+++.+...|++|++++++.++.+.+...+ +.. . ..|..+.+.+ .+..+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999997 99999999999999999999999877655553332 222 1 1244454433 22234789
Q ss_pred EEEEcCCC
Q 027668 109 GIIDTVSA 116 (220)
Q Consensus 109 ~vid~~g~ 116 (220)
.+|.+++.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988875
No 417
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.02 E-value=0.0066 Score=50.48 Aligned_cols=72 Identities=26% Similarity=0.344 Sum_probs=50.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcc-cHHHH---HHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA---VERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~---~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
.+++|+|+|+|.+|+.++..+...|++|++++..+. ..++. .++.|..... .+..+ +..+++|+||.+.|..
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~---~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE---EFLEGVDLVVVSPGVP 79 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch---hHhhcCCEEEECCCCC
Confidence 468899999988999999999999999999988752 22211 1344655322 22222 2335799999998864
No 418
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.01 E-value=0.0021 Score=45.40 Aligned_cols=91 Identities=19% Similarity=0.270 Sum_probs=57.3
Q ss_pred EEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC-C----cEEecCC--CHHHHHHhcCCccEEEEcCCCc
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-A----DSFLVSR--DQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~----~~v~~~~--~~~~~~~~~~~~d~vid~~g~~ 117 (220)
+|.|+|+|..|.+++..+...|.+|....++++..+.+.+.-. . ...+... -.+.+++...+.|+++-++...
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 5889999999999999999999999999999877666643211 0 0000000 0122334446899999999887
Q ss_pred ccHHHHHhcccc---CCEEEEe
Q 027668 118 HPLMPLIGLLKS---QGKLVLL 136 (220)
Q Consensus 118 ~~~~~~~~~l~~---~g~iv~~ 136 (220)
..+..++.+++ .+..+..
T Consensus 81 -~~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 81 -AHREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GHHHHHHHHTTTSHTT-EEEE
T ss_pred -HHHHHHHHHhhccCCCCEEEE
Confidence 36666666654 3444443
No 419
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.01 E-value=0.0047 Score=52.35 Aligned_cols=73 Identities=22% Similarity=0.235 Sum_probs=52.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
.+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.++++... +...+. ........|++++|++-.
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~-~~~~~~--~~~~~~~~diiINtT~vG 450 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQA-LTLADL--ENFHPEEGMILANTTSVG 450 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCce-eeHhHh--hhhccccCeEEEecccCC
Confidence 4678999999999999999999999999999998888777777775432 222111 111122578999887543
No 420
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0051 Score=47.38 Aligned_cols=73 Identities=22% Similarity=0.322 Sum_probs=50.3
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCcE---EecCCCHHHHHH-------hcCCccEE
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA-------AMGTMDGI 110 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~-------~~~~~d~v 110 (220)
+++|.|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ +... ..|-.+.+.+.+ ..+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899997 99999999999999999999999887655543322 3221 123334333322 22479999
Q ss_pred EEcCCCc
Q 027668 111 IDTVSAV 117 (220)
Q Consensus 111 id~~g~~ 117 (220)
|.++|..
T Consensus 82 I~~ag~~ 88 (270)
T PRK05650 82 VNNAGVA 88 (270)
T ss_pred EECCCCC
Confidence 9998853
No 421
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.01 E-value=0.0054 Score=48.48 Aligned_cols=74 Identities=23% Similarity=0.232 Sum_probs=52.9
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCC-CeEEEEeCCcccHHHHHHHcCC-----cE-EecCCCHHHHHHh-------cCCc
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA-----DS-FLVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~-----~~-v~~~~~~~~~~~~-------~~~~ 107 (220)
+++++|.|+ +++|..+++.+...| ++|++++++.++.+++.++++. .. ..|-.+.+.++++ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568999997 899999999888899 8999999988776666555531 11 1344454433322 2479
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999874
No 422
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=97.01 E-value=0.009 Score=47.31 Aligned_cols=86 Identities=23% Similarity=0.203 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (220)
-.+++|.|+|.|.+|.+.++.++..|.+|++..+...+....+++.|.... + ..+.....|+|+-++.... .
T Consensus 15 L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~----s---~~eaa~~ADVVvLaVPd~~-~ 86 (330)
T PRK05479 15 IKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVL----T---VAEAAKWADVIMILLPDEV-Q 86 (330)
T ss_pred hCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeC----C---HHHHHhcCCEEEEcCCHHH-H
Confidence 356889999999999999999999999998877765554444456676421 1 2334457899999998653 3
Q ss_pred HHH-----HhccccCCEEE
Q 027668 121 MPL-----IGLLKSQGKLV 134 (220)
Q Consensus 121 ~~~-----~~~l~~~g~iv 134 (220)
... ...++++..++
T Consensus 87 ~~V~~~~I~~~Lk~g~iL~ 105 (330)
T PRK05479 87 AEVYEEEIEPNLKEGAALA 105 (330)
T ss_pred HHHHHHHHHhcCCCCCEEE
Confidence 333 33455555543
No 423
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=97.00 E-value=0.0029 Score=48.74 Aligned_cols=104 Identities=16% Similarity=0.048 Sum_probs=64.6
Q ss_pred hhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC-cEE-ecCCCHHHHHHhc-CCccE
Q 027668 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSF-LVSRDQDEMQAAM-GTMDG 109 (220)
Q Consensus 33 ~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v-~~~~~~~~~~~~~-~~~d~ 109 (220)
++... .+.++.+||=+|+|. |..+..+++..|++|+.++.++...+.+.+.+.. ..+ +...+.... .+. +.||+
T Consensus 44 ~l~~l-~l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~-~~~~~~FD~ 120 (263)
T PTZ00098 44 ILSDI-ELNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKK-DFPENTFDM 120 (263)
T ss_pred HHHhC-CCCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccC-CCCCCCeEE
Confidence 34444 478999999999874 5556677777788999999998776666544432 111 111111100 111 36999
Q ss_pred EEEc--CCC------cccHHHHHhccccCCEEEEecCC
Q 027668 110 IIDT--VSA------VHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 110 vid~--~g~------~~~~~~~~~~l~~~g~iv~~g~~ 139 (220)
|+.. .-. ...++.+.+.|+|||.++.....
T Consensus 121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~~ 158 (263)
T PTZ00098 121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDYC 158 (263)
T ss_pred EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 9852 111 12456678899999999987653
No 424
>PRK08264 short chain dehydrogenase; Validated
Probab=96.99 E-value=0.0067 Score=45.69 Aligned_cols=71 Identities=25% Similarity=0.317 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCC--cE-EecCCCHHHHHHhc---CCccEEEEc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA--DS-FLVSRDQDEMQAAM---GTMDGIIDT 113 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~--~~-v~~~~~~~~~~~~~---~~~d~vid~ 113 (220)
.+.+++|.|+ |.+|..+++.+...|+ +|++++++.++.+. .+. .. ..|..+.+.+.+.. +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 4678999997 9999999999999999 99999988765432 332 22 13444555554433 368999999
Q ss_pred CCC
Q 027668 114 VSA 116 (220)
Q Consensus 114 ~g~ 116 (220)
+|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 887
No 425
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.99 E-value=0.018 Score=43.71 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCC--c-EEecCCCHHHHHHh-------cCCccEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D-SFLVSRDQDEMQAA-------MGTMDGI 110 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~v~~~~~~~~~~~~-------~~~~d~v 110 (220)
+++++||.|+ |.+|..+++.+...|++|++++++. . +..+. . ...|-.+.+.+.+. .+.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5688999997 8999999999999999999998875 1 12222 1 11244444433332 2368999
Q ss_pred EEcCCCc
Q 027668 111 IDTVSAV 117 (220)
Q Consensus 111 id~~g~~ 117 (220)
|.++|..
T Consensus 81 i~~ag~~ 87 (252)
T PRK08220 81 VNAAGIL 87 (252)
T ss_pred EECCCcC
Confidence 9998863
No 426
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0085 Score=46.31 Aligned_cols=76 Identities=20% Similarity=0.267 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSF---LVSRDQDEMQAA-------MGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~~~ 107 (220)
+..+++|.|+ |.+|..+++.+...|++|++++++.++...+.. ..+.... .|..+.+.+.++ .+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3468999997 999999999999999999999887665444322 2233221 244444444322 2478
Q ss_pred cEEEEcCCCc
Q 027668 108 DGIIDTVSAV 117 (220)
Q Consensus 108 d~vid~~g~~ 117 (220)
|.+|.++|..
T Consensus 89 d~vi~~Ag~~ 98 (274)
T PRK07775 89 EVLVSGAGDT 98 (274)
T ss_pred CEEEECCCcC
Confidence 9999998763
No 427
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.99 E-value=0.024 Score=45.82 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-chHHHH--HHHHHHHCCCeEEEEeCCcc---------------cHHHHHHHcCCcE-E--ecCCCHHHH
Q 027668 42 PGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSPS---------------KKSEAVERLGADS-F--LVSRDQDEM 100 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~--~~~~~~~~g~~v~~~~~~~~---------------~~~~~~~~~g~~~-v--~~~~~~~~~ 100 (220)
-++++||.|+ +++|++ .++.+ ..|++++++....+ ..+.+.++.|... . .|-.+.+.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 4578999996 899999 56666 89998888774221 1233445666432 2 234443332
Q ss_pred H-------HhcCCccEEEEcCCCc
Q 027668 101 Q-------AAMGTMDGIIDTVSAV 117 (220)
Q Consensus 101 ~-------~~~~~~d~vid~~g~~ 117 (220)
. +..+++|+++++++.+
T Consensus 119 ~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHhcCCCCEEEECCccC
Confidence 2 2235799999999876
No 428
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0057 Score=47.67 Aligned_cols=76 Identities=24% Similarity=0.292 Sum_probs=51.2
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCc---------ccHHHHHHHc---CCcE---EecCCCHHHHHHh-
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAVERL---GADS---FLVSRDQDEMQAA- 103 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~~---v~~~~~~~~~~~~- 103 (220)
.+++++||.|+ +++|..+++.+...|++|++++++. ++.+.+.+++ +... ..|-.+.+.+.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 45789999997 8999999999999999999887654 4344433333 3221 1244444333221
Q ss_pred ------cCCccEEEEcCCC
Q 027668 104 ------MGTMDGIIDTVSA 116 (220)
Q Consensus 104 ------~~~~d~vid~~g~ 116 (220)
.+.+|++|+++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 2479999999886
No 429
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.98 E-value=0.0044 Score=53.43 Aligned_cols=92 Identities=17% Similarity=0.208 Sum_probs=68.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCcccHH
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~d~vid~~g~~~~~~ 121 (220)
++|+|.|.|.+|+.+++.++..|.++++++.++++.+.+ +++|...++ |..+++..++.. +.+|.++-+.++.....
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~ 479 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLM-RKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTM 479 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHH
Confidence 579999999999999999999999999999999888777 678876544 445556655543 38999999998865332
Q ss_pred HH---HhccccCCEEEEe
Q 027668 122 PL---IGLLKSQGKLVLL 136 (220)
Q Consensus 122 ~~---~~~l~~~g~iv~~ 136 (220)
.. .+...|..+++.-
T Consensus 480 ~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 480 KIVELCQQHFPHLHILAR 497 (601)
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 33 3334456566543
No 430
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.98 E-value=0.0029 Score=47.61 Aligned_cols=33 Identities=39% Similarity=0.627 Sum_probs=28.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~ 75 (220)
..+|+|+|+|++|..++..+...|. ++++++.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999 77777554
No 431
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.98 E-value=0.011 Score=44.50 Aligned_cols=100 Identities=26% Similarity=0.345 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCC---cEE-ecCCCHHHHHHhcC-CccEEEEc
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---DSF-LVSRDQDEMQAAMG-TMDGIIDT 113 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---~~v-~~~~~~~~~~~~~~-~~d~vid~ 113 (220)
..||++||=+|+| +|-.+..+++..|- +|+.++-++..++.+.++..- ..+ +...+.+.+. +.+ .||+|.-+
T Consensus 49 ~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LP-f~D~sFD~vt~~ 126 (238)
T COG2226 49 IKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLP-FPDNSFDAVTIS 126 (238)
T ss_pred CCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCC-CCCCccCEEEee
Confidence 4589999999887 49999999998876 999999999987777555442 111 1122223322 222 78988776
Q ss_pred CCCc------ccHHHHHhccccCCEEEEecCCCC
Q 027668 114 VSAV------HPLMPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 114 ~g~~------~~~~~~~~~l~~~g~iv~~g~~~~ 141 (220)
.|-. ..+..+.+.|+|+|+++.+.....
T Consensus 127 fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p 160 (238)
T COG2226 127 FGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP 160 (238)
T ss_pred ehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 6653 246778899999999998877653
No 432
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.98 E-value=0.011 Score=46.58 Aligned_cols=88 Identities=19% Similarity=0.216 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc-
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (220)
-.|++|.|+|-|.+|...++.++..|.+|++..+.....+.+ +..|+. +. .+.+.....|+|+-++.....
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A-~~~G~~-v~------sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVA-KADGFE-VM------SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHH-HHcCCE-EC------CHHHHHhcCCEEEEeCCChHHH
Confidence 467899999999999999999999999999887664333333 455664 21 244455578999998876432
Q ss_pred --H-HHHHhccccCCEEEEe
Q 027668 120 --L-MPLIGLLKSQGKLVLL 136 (220)
Q Consensus 120 --~-~~~~~~l~~~g~iv~~ 136 (220)
+ ...+..|+++..++..
T Consensus 86 ~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHHhcCCCCCEEEEC
Confidence 2 2355667777666544
No 433
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.98 E-value=0.0066 Score=50.52 Aligned_cols=74 Identities=20% Similarity=0.258 Sum_probs=56.2
Q ss_pred EEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 118 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~~~d~vid~~g~~~ 118 (220)
+|+|+|+|.+|..+++.+...|.+++++++++++.+.+.+..|...+. +..+.+.+.+. ..++|.+|-+++...
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~ 77 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDE 77 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChH
Confidence 588999999999999999999999999999988877764436655443 33344555544 358999999888754
No 434
>PRK08328 hypothetical protein; Provisional
Probab=96.97 E-value=0.0045 Score=46.72 Aligned_cols=33 Identities=36% Similarity=0.646 Sum_probs=29.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~ 75 (220)
+.+|+|+|+|++|..++..+...|. ++++++.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999 77777654
No 435
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.97 E-value=0.019 Score=45.23 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=60.2
Q ss_pred EEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHHHHc-------CCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (220)
+|.|+|+|.+|..++..+...|. +++++++.+++.+.....+ +....+...+.+. ..+.|+||.|+|
T Consensus 2 kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~----l~~aDIVIitag 77 (306)
T cd05291 2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSD----CKDADIVVITAG 77 (306)
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHH----hCCCCEEEEccC
Confidence 68899999999999999988885 7999998877655554443 2211111222221 258999999999
Q ss_pred Ccc---------------cHHH---HHhccccCCEEEEecCCC
Q 027668 116 AVH---------------PLMP---LIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 116 ~~~---------------~~~~---~~~~l~~~g~iv~~g~~~ 140 (220)
.+. .++. .++...+.+.++.++.+.
T Consensus 78 ~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~ 120 (306)
T cd05291 78 APQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPV 120 (306)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChH
Confidence 852 1122 223345678888877553
No 436
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0068 Score=46.86 Aligned_cols=75 Identities=24% Similarity=0.345 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc-------HHHHH---HHcCCcE---EecCCCHHHHHHh----
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAV---ERLGADS---FLVSRDQDEMQAA---- 103 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~-------~~~~~---~~~g~~~---v~~~~~~~~~~~~---- 103 (220)
.+++++|.|+ |.+|..+++.+...|++|++++++.+. .+.+. +..+... ..|..+.+.+.++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 5678999997 999999999999999999999987542 12221 2333321 1344454444322
Q ss_pred ---cCCccEEEEcCCC
Q 027668 104 ---MGTMDGIIDTVSA 116 (220)
Q Consensus 104 ---~~~~d~vid~~g~ 116 (220)
.+.+|++|.++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 2479999999886
No 437
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.018 Score=42.14 Aligned_cols=60 Identities=20% Similarity=0.320 Sum_probs=42.5
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhc---CCccEEEEcCCC
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSA 116 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---~~~d~vid~~g~ 116 (220)
+++|.|+ |++|..+++.+... .+|++++++.. ....|-.+.+.+++.. +++|++|.++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence 5889997 99999999887777 89999887653 1123444444444332 478999998875
No 438
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.97 E-value=0.0059 Score=45.78 Aligned_cols=72 Identities=19% Similarity=0.273 Sum_probs=53.2
Q ss_pred EEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc-EEecCCCHHHHHHhcC--CccEEEEcCCCc
Q 027668 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMG--TMDGIIDTVSAV 117 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~--~~d~vid~~g~~ 117 (220)
|||.|+ |-+|..++..+...|.+|+.+.++.........+.+.. ...|..+.+.++++.. .+|.||.+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 789997 99999999999999999988888877554433333432 2335556666666554 689999999874
No 439
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.97 E-value=0.0062 Score=47.83 Aligned_cols=85 Identities=19% Similarity=0.324 Sum_probs=57.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (220)
.|++|.|+|.|.+|+.++++++.+|++|++.+++... .+..... . .++++....|+|+.+....+.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~~--~---~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSIY--M---EPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCccccc--C---CHHHHHhhCCEEEECCCCCchhh
Confidence 5789999999999999999999999999999876321 1221111 1 133344467888877765321
Q ss_pred --H-HHHHhccccCCEEEEecC
Q 027668 120 --L-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 120 --~-~~~~~~l~~~g~iv~~g~ 138 (220)
+ ...+..|+++..++.++.
T Consensus 189 ~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1 245667777777777764
No 440
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0051 Score=46.96 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=51.3
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCc---EEecCCCHHHHHHh-------cCC
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~ 106 (220)
.++.++||.|+ |.+|..+++.+...|++++++++++++. .+.++ .+.. ...|-.+.+.+... .++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR 83 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 35689999997 9999999999999999999998887654 32222 2322 12244444433322 147
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|.+|.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999984
No 441
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.95 E-value=0.005 Score=46.76 Aligned_cols=98 Identities=19% Similarity=0.285 Sum_probs=60.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHHHHc---CCc--EEecCCCH--HHHH-HhcCCcc
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL---GAD--SFLVSRDQ--DEMQ-AAMGTMD 108 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~--~~~~-~~~~~~d 108 (220)
.+.||++|+=-|.|+ |.++..+++..|. +|+.....+++.+.+.++| |.. ..+...+- +-+. +..+.+|
T Consensus 37 ~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~~~~~D 115 (247)
T PF08704_consen 37 DIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEELESDFD 115 (247)
T ss_dssp T--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-TTSEE
T ss_pred CCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccccCccc
Confidence 389999999988654 6666677776664 9999999998877765544 431 12222221 1111 1223789
Q ss_pred EEEEcCCC-cccHHHHHhcc-ccCCEEEEec
Q 027668 109 GIIDTVSA-VHPLMPLIGLL-KSQGKLVLLG 137 (220)
Q Consensus 109 ~vid~~g~-~~~~~~~~~~l-~~~g~iv~~g 137 (220)
.||-=... ...+..+.+.| ++||+++.+.
T Consensus 116 avfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 116 AVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp EEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 99855544 44688899999 8999998874
No 442
>PRK04266 fibrillarin; Provisional
Probab=96.95 E-value=0.018 Score=43.26 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=59.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCC-CeEEEEeCCcccHHHHHHH---c-CCcEEe-cCCCHHHHHHhcCCccEEEE
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVER---L-GADSFL-VSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~~~~~~~~~~~~---~-g~~~v~-~~~~~~~~~~~~~~~d~vid 112 (220)
.+++|++||=+|+|+ |..+..+++..+ .+|++++.+++..+.+.+. . +...+. +..++.....+.+.+|+++-
T Consensus 69 ~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~~ 147 (226)
T PRK04266 69 PIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIYQ 147 (226)
T ss_pred CCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEEE
Confidence 478999999999764 555566666654 4899999998765544222 1 222221 11111111122346999995
Q ss_pred cCCCcc----cHHHHHhccccCCEEEEe
Q 027668 113 TVSAVH----PLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 113 ~~g~~~----~~~~~~~~l~~~g~iv~~ 136 (220)
....+. .+..+.+.|++||++++.
T Consensus 148 d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 148 DVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred CCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 444321 246677889999999985
No 443
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.95 E-value=0.0079 Score=46.04 Aligned_cols=75 Identities=15% Similarity=0.298 Sum_probs=51.1
Q ss_pred CCCEEEEEcC---chHHHHHHHHHHHCCCeEEEEeCCc--ccHHHHHHHcCC--c-EEecCCCHHHHHHh-------cCC
Q 027668 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAVERLGA--D-SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~~~g~--~-~v~~~~~~~~~~~~-------~~~ 106 (220)
.+++++|.|+ +++|.++++.+...|++|++++++. +..+++.++++. . ...|-.+.+.++++ .++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999985 6999999999999999999988653 334455445542 2 22344444433322 247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|+++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998875
No 444
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.95 E-value=0.013 Score=49.23 Aligned_cols=73 Identities=15% Similarity=0.226 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (220)
-.+++|+|+|.|.+|++++++++..|++|++.++......++.+++|..........+.+ .++|+||-+.|-+
T Consensus 13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi~ 85 (473)
T PRK00141 13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGWR 85 (473)
T ss_pred ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCCC
Confidence 345789999999999999999999999999988765544333355676543322222222 3678888776664
No 445
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.94 E-value=0.006 Score=46.73 Aligned_cols=74 Identities=18% Similarity=0.201 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCC-cccHHHHHHH----cCCc---EEecCCCHHHHHHh-------cC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVER----LGAD---SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~-~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~-------~~ 105 (220)
+++++||.|+ +++|..++..+...|++|+++.++ +++.+...++ .+.. ...|-.+.+.+++. .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999997 999999999999999999887654 3333333222 2322 12244454433322 24
Q ss_pred CccEEEEcCC
Q 027668 106 TMDGIIDTVS 115 (220)
Q Consensus 106 ~~d~vid~~g 115 (220)
.+|++|+++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 7899999886
No 446
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.94 E-value=0.0088 Score=44.44 Aligned_cols=97 Identities=27% Similarity=0.236 Sum_probs=59.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCcE--EecCCCHHHHHHhcCCccEEEEc
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS--FLVSRDQDEMQAAMGTMDGIIDT 113 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~~~~~d~vid~ 113 (220)
.++++++||-+|+|. |..+..+++.. .+++.++.+++..+.+.+. ++... +...+..+.. ...+.||.|+-.
T Consensus 75 ~~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~I~~~ 151 (212)
T PRK00312 75 ELKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGW-PAYAPFDRILVT 151 (212)
T ss_pred CCCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCC-CcCCCcCEEEEc
Confidence 468899999999864 55555555553 4899999887765555333 34321 1111111111 011479999865
Q ss_pred CCCcccHHHHHhccccCCEEEEecC
Q 027668 114 VSAVHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 114 ~g~~~~~~~~~~~l~~~g~iv~~g~ 138 (220)
...........+.|+++|+++..-.
T Consensus 152 ~~~~~~~~~l~~~L~~gG~lv~~~~ 176 (212)
T PRK00312 152 AAAPEIPRALLEQLKEGGILVAPVG 176 (212)
T ss_pred cCchhhhHHHHHhcCCCcEEEEEEc
Confidence 5554456678889999999886543
No 447
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.93 E-value=0.029 Score=43.64 Aligned_cols=104 Identities=14% Similarity=0.184 Sum_probs=70.9
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc--CC--cEEecCCCHHHHHHhc-------C--C
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GA--DSFLVSRDQDEMQAAM-------G--T 106 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~--~~v~~~~~~~~~~~~~-------~--~ 106 (220)
-+++.|+|.|+ ++.|..++.-+...|..|++.+..++..+.+..+. +- +..+|-.+++.+++.. + +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 45677999998 99999999999999999999998877666664444 21 2334555555554332 2 7
Q ss_pred ccEEEEcCCCcc--------------------------cHHHHHhccc-cCCEEEEecCCCCCcc
Q 027668 107 MDGIIDTVSAVH--------------------------PLMPLIGLLK-SQGKLVLLGAPEKPLE 144 (220)
Q Consensus 107 ~d~vid~~g~~~--------------------------~~~~~~~~l~-~~g~iv~~g~~~~~~~ 144 (220)
.-.++|++|... .....+..+| ..||+|.+++..+...
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~ 171 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVA 171 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCcc
Confidence 788899988431 1122333444 4799999998766433
No 448
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.93 E-value=0.0067 Score=46.56 Aligned_cols=75 Identities=12% Similarity=0.243 Sum_probs=49.0
Q ss_pred CCCEEEEEcC---chHHHHHHHHHHHCCCeEEEEeCCcc---cHHHHHHHcCCc--EEecCCCHHHHHHh-------cCC
Q 027668 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGAD--SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~--~v~~~~~~~~~~~~-------~~~ 106 (220)
+++.+||.|+ +++|.++++.+...|++|+++.+.+. ..+++.++.|.. ...|-.+.+.+.++ .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5688999994 58999999999999999998765432 223333333422 22344454433322 247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|+++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999875
No 449
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.93 E-value=0.0067 Score=45.97 Aligned_cols=75 Identities=20% Similarity=0.299 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCcE-E--ecCCCHHHHHHhc-------CCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS-F--LVSRDQDEMQAAM-------GTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~-------~~~ 107 (220)
++.++||.|+ |.+|..+++.+...|++|++++++.++.+++.+. .+... + .|..+.+.+++.. +++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 9999999999999999999999887665544322 23211 1 2334444433321 368
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999974
No 450
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.92 E-value=0.039 Score=42.78 Aligned_cols=89 Identities=20% Similarity=0.246 Sum_probs=65.6
Q ss_pred EEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH-
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 123 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 123 (220)
+|-++|.|.+|.-.++-+...|..+.+.++++++..+..+..|+...-+ ..+.....|+||-|+++.......
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s------~~eaa~~aDvVitmv~~~~~V~~V~ 75 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAAS------PAEAAAEADVVITMLPDDAAVRAVL 75 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCC------HHHHHHhCCEEEEecCCHHHHHHHH
Confidence 5778899999999999999999999999999988455556778764421 223334789999999887654443
Q ss_pred ------HhccccCCEEEEecCC
Q 027668 124 ------IGLLKSQGKLVLLGAP 139 (220)
Q Consensus 124 ------~~~l~~~g~iv~~g~~ 139 (220)
...++++..++.+...
T Consensus 76 ~g~~g~~~~~~~G~i~IDmSTi 97 (286)
T COG2084 76 FGENGLLEGLKPGAIVIDMSTI 97 (286)
T ss_pred hCccchhhcCCCCCEEEECCCC
Confidence 3445677777777654
No 451
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.92 E-value=0.025 Score=45.17 Aligned_cols=87 Identities=23% Similarity=0.272 Sum_probs=57.4
Q ss_pred CCCEEEEEcCchHHHHHHHHH-HHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 027668 42 PGMHVGVVGLGGLGHVAVKFA-KAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~-~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (220)
.|.+|.|+|.|.+|..+++.+ +.+|++|++.+++.... . .. +.. .. +.+.+.....|+|+-++......
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~--~-~~-~~~----~~--~~l~ell~~aDvIvl~lP~t~~t 214 (332)
T PRK08605 145 KDLKVAVIGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAK--A-AT-YVD----YK--DTIEEAVEGADIVTLHMPATKYN 214 (332)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCEEEEECCCccHh--H-Hh-hcc----cc--CCHHHHHHhCCEEEEeCCCCcch
Confidence 478899999999999999988 67899999888765432 1 11 111 11 12334445789999887664322
Q ss_pred H-----HHHhccccCCEEEEecC
Q 027668 121 M-----PLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 121 ~-----~~~~~l~~~g~iv~~g~ 138 (220)
. ..+..++++..++.++.
T Consensus 215 ~~li~~~~l~~mk~gailIN~sR 237 (332)
T PRK08605 215 HYLFNADLFKHFKKGAVFVNCAR 237 (332)
T ss_pred hhhcCHHHHhcCCCCcEEEECCC
Confidence 2 23566777777776654
No 452
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=96.92 E-value=0.0071 Score=46.62 Aligned_cols=87 Identities=13% Similarity=0.216 Sum_probs=54.9
Q ss_pred EEEEEcCchHHHHHHHHHHHC-CCeEEEEeCCcccHHHHHHHcCCc-EEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 027668 45 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 122 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~ 122 (220)
+|.|+|+|.+|...++.+... +.++..+...+...+...+.++.. .+ ..+.+. +...+|+|++|++.....+.
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~--~~d~~~---l~~~~DvVve~t~~~~~~e~ 77 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEAVRV--VSSVDA---LPQRPDLVVECAGHAALKEH 77 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccCCee--eCCHHH---hccCCCEEEECCCHHHHHHH
Confidence 688999999999998877765 456665554333333332333221 12 222222 22479999999998765667
Q ss_pred HHhccccCCEEEEe
Q 027668 123 LIGLLKSQGKLVLL 136 (220)
Q Consensus 123 ~~~~l~~~g~iv~~ 136 (220)
+..+|+.|-.++..
T Consensus 78 ~~~aL~aGk~Vvi~ 91 (265)
T PRK13303 78 VVPILKAGIDCAVI 91 (265)
T ss_pred HHHHHHcCCCEEEe
Confidence 77888877666653
No 453
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.91 E-value=0.0088 Score=46.13 Aligned_cols=85 Identities=14% Similarity=0.194 Sum_probs=55.2
Q ss_pred EEEEEcCchHHHHHHHHHHHC--CCeEE-EEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 027668 45 HVGVVGLGGLGHVAVKFAKAM--GVKVT-VISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 121 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~--g~~v~-~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 121 (220)
+|.|+|+|.+|...++.+... +.+++ +.+++.++.+.+.+.++.. ++ .+.+ ++..++|+|++|++.....+
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~-~~--~~~~---ell~~~DvVvi~a~~~~~~~ 76 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAK-AC--LSID---ELVEDVDLVVECASVNAVEE 76 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCe-eE--CCHH---HHhcCCCEEEEcCChHHHHH
Confidence 578999999999888876654 45544 5566666666665666643 22 2222 22357999999998765455
Q ss_pred HHHhccccCCEEEE
Q 027668 122 PLIGLLKSQGKLVL 135 (220)
Q Consensus 122 ~~~~~l~~~g~iv~ 135 (220)
.+...++.|-.++.
T Consensus 77 ~~~~al~~Gk~Vvv 90 (265)
T PRK13304 77 VVPKSLENGKDVII 90 (265)
T ss_pred HHHHHHHcCCCEEE
Confidence 56667776554544
No 454
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.91 E-value=0.0093 Score=48.69 Aligned_cols=76 Identities=21% Similarity=0.296 Sum_probs=52.9
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHH------HHHHHc-CCcEE-ecCCCHHHHHHhcC----Cc
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS------EAVERL-GADSF-LVSRDQDEMQAAMG----TM 107 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~------~~~~~~-g~~~v-~~~~~~~~~~~~~~----~~ 107 (220)
..+.+|||.|+ |.+|..+++.+...|.+|++++++..+.. ...... +.+.+ .|..+.+.+.+... ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 45678999997 99999999999999999999998764321 111112 33332 35556666655433 69
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|+||+|++.
T Consensus 138 D~Vi~~aa~ 146 (390)
T PLN02657 138 DVVVSCLAS 146 (390)
T ss_pred cEEEECCcc
Confidence 999999864
No 455
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.91 E-value=0.005 Score=49.74 Aligned_cols=34 Identities=35% Similarity=0.538 Sum_probs=30.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~ 75 (220)
.+.+|+|+|+|++|..++..+...|. ++++++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999998 88888776
No 456
>PRK00811 spermidine synthase; Provisional
Probab=96.91 E-value=0.016 Score=45.19 Aligned_cols=95 Identities=17% Similarity=0.133 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcCC--------c--EEecCCCHHHHHHhcCCccE
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA--------D--SFLVSRDQDEMQAAMGTMDG 109 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~--------~--~v~~~~~~~~~~~~~~~~d~ 109 (220)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+.+.+.. . .++..+-...+....+.||+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 153 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV 153 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence 3557999999865 6667777776665 899999998766655443321 1 12222222333332347999
Q ss_pred EEEcCCCc----------ccHHHHHhccccCCEEEEe
Q 027668 110 IIDTVSAV----------HPLMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 110 vid~~g~~----------~~~~~~~~~l~~~g~iv~~ 136 (220)
||--...+ +.++.+.+.|+++|.++.-
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 98543221 1245677899999999864
No 457
>PRK09135 pteridine reductase; Provisional
Probab=96.91 E-value=0.0079 Score=45.49 Aligned_cols=75 Identities=16% Similarity=0.219 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc-cHHHHHHHc----C--Cc-EEecCCCHHHHHHh-------cC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERL----G--AD-SFLVSRDQDEMQAA-------MG 105 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~-~~~~~~~~~----g--~~-~v~~~~~~~~~~~~-------~~ 105 (220)
.++++||.|+ |.+|..+++.+...|++|++++++.+ +.+.+.+.+ + .. ...|..+.+.+..+ .+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999997 99999999999999999999988643 233322211 1 11 12244454444322 23
Q ss_pred CccEEEEcCCC
Q 027668 106 TMDGIIDTVSA 116 (220)
Q Consensus 106 ~~d~vid~~g~ 116 (220)
++|++|.++|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 458
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.91 E-value=0.01 Score=45.31 Aligned_cols=74 Identities=27% Similarity=0.317 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCc---EEecCCCHHHHHH-------hcCCc
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQA-------AMGTM 107 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~-------~~~~~ 107 (220)
+++++||.|+ |.+|..+++.+...|++|+++++++. ...+.++ .+.+ ...|..+.+.+.+ ..+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999997 99999999999999999999988753 2233222 2332 1234444433322 12479
Q ss_pred cEEEEcCCC
Q 027668 108 DGIIDTVSA 116 (220)
Q Consensus 108 d~vid~~g~ 116 (220)
|++|.++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999874
No 459
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.91 E-value=0.019 Score=44.48 Aligned_cols=95 Identities=17% Similarity=0.214 Sum_probs=69.9
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
..+|+..+....++...---.|++|+|+|. ..+|.-++.++...|+.|++....... +
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~---------------------l 201 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD---------------------L 201 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------H
Confidence 456766666666666542248999999997 569999999999999998877643221 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~ 139 (220)
++.+..+|++|.++|.+..+ --+.+++|..++.+|..
T Consensus 202 ~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin 238 (287)
T PRK14176 202 KKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence 23345789999999998654 34478899999998874
No 460
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.90 E-value=0.0096 Score=45.62 Aligned_cols=94 Identities=22% Similarity=0.276 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCc---EEecCCCHHHHHHh-cCCccEEEEc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-MGTMDGIIDT 113 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-~~~~d~vid~ 113 (220)
.++.+||-+|+|. |..+..+++ .|.+|+.++.+++..+.+.+. .|.. .++ ..+...+... .+.||+|+..
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~-~g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~-~~d~~~l~~~~~~~fD~V~~~ 119 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAE-LGHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFI-HCAAQDIAQHLETPVDLILFH 119 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHhcCCccceEEE-EcCHHHHhhhcCCCCCEEEeh
Confidence 4567889899874 777777776 488999999998876665433 2321 122 2222223222 2479999854
Q ss_pred CC-----C-cccHHHHHhccccCCEEEEec
Q 027668 114 VS-----A-VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 114 ~g-----~-~~~~~~~~~~l~~~g~iv~~g 137 (220)
.. . ...+..+.+.|++||.++.+-
T Consensus 120 ~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 120 AVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred hHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 32 1 123667888999999998653
No 461
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.89 E-value=0.0078 Score=45.65 Aligned_cols=77 Identities=17% Similarity=0.289 Sum_probs=51.7
Q ss_pred CCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc---CCc--EE--ecCC--CHHH-------HHH
Q 027668 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SF--LVSR--DQDE-------MQA 102 (220)
Q Consensus 40 ~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v--~~~~--~~~~-------~~~ 102 (220)
..++.+++|.|+ |.+|..+++.+...|++|++++++.++.+.+.+++ +.. .+ .+.. +.+. +.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457889999997 99999999998889999999999876554443332 221 11 1221 2222 222
Q ss_pred hcCCccEEEEcCCC
Q 027668 103 AMGTMDGIIDTVSA 116 (220)
Q Consensus 103 ~~~~~d~vid~~g~ 116 (220)
..+.+|.+|.++|.
T Consensus 89 ~~~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QFGRLDGVLHNAGL 102 (247)
T ss_pred HhCCCCEEEECCcc
Confidence 22478999998865
No 462
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.89 E-value=0.023 Score=45.06 Aligned_cols=95 Identities=17% Similarity=0.165 Sum_probs=57.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH----------cCCc--EEecC-CCHHHHHHhcCCccE
Q 027668 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----------LGAD--SFLVS-RDQDEMQAAMGTMDG 109 (220)
Q Consensus 43 ~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----------~g~~--~v~~~-~~~~~~~~~~~~~d~ 109 (220)
-++|.|+|+|.+|...++.+...|.+|++.+.+++..+.+... .|.. ..... .-...+.+...+.|+
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 3679999999999999999999999999999998755443221 1110 00000 000112233458999
Q ss_pred EEEcCCCcccHH-----HHHhccccCCEEEEecC
Q 027668 110 IIDTVSAVHPLM-----PLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 110 vid~~g~~~~~~-----~~~~~l~~~g~iv~~g~ 138 (220)
|++|+.....++ .....++++ .++....
T Consensus 87 ViEavpE~l~vK~~lf~~l~~~~~~~-aIlaSnT 119 (321)
T PRK07066 87 IQESAPEREALKLELHERISRAAKPD-AIIASST 119 (321)
T ss_pred EEECCcCCHHHHHHHHHHHHHhCCCC-eEEEECC
Confidence 999998763222 333444444 4554433
No 463
>PTZ00146 fibrillarin; Provisional
Probab=96.89 E-value=0.019 Score=44.65 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=63.7
Q ss_pred hhhHhccCCCCCCEEEEEcCchHHHHHHHHHHHCCC--eEEEEeCCcccHHHHHH----HcCCcEEecCC-CHHHHHHhc
Q 027668 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVE----RLGADSFLVSR-DQDEMQAAM 104 (220)
Q Consensus 32 ~~l~~~~~~~~~~~vlI~G~g~~G~~~~~~~~~~g~--~v~~~~~~~~~~~~~~~----~~g~~~v~~~~-~~~~~~~~~ 104 (220)
..+..+. ++|+++||=+|+|+ |..+..++...|. +|++++-+++..+.+.+ .-++..++... .+.......
T Consensus 123 ~g~~~l~-IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~p~~y~~~~ 200 (293)
T PTZ00146 123 GGVANIP-IKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARYPQKYRMLV 200 (293)
T ss_pred CCcceec-cCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccChhhhhccc
Confidence 4455554 79999999999875 7777888888763 79999888543222222 12343333222 222222223
Q ss_pred CCccEEEEcCCCccc----HHHHHhccccCCEEEEe
Q 027668 105 GTMDGIIDTVSAVHP----LMPLIGLLKSQGKLVLL 136 (220)
Q Consensus 105 ~~~d~vid~~g~~~~----~~~~~~~l~~~g~iv~~ 136 (220)
+.+|+||-.+..++. ...+...|+++|.+++.
T Consensus 201 ~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI~ 236 (293)
T PTZ00146 201 PMVDVIFADVAQPDQARIVALNAQYFLKNGGHFIIS 236 (293)
T ss_pred CCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEEE
Confidence 479999865554432 22456689999999984
No 464
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=96.89 E-value=0.012 Score=46.57 Aligned_cols=98 Identities=17% Similarity=0.249 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHH-HCCC-eEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~-~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (220)
+....+.|+|+|..+.+-++.++ .++. ++.+.+++++..+.+++.+....-.+-...+..++...+.|+|+-|+....
T Consensus 128 ~da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~ 207 (330)
T COG2423 128 KDASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTE 207 (330)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCC
Confidence 44567889999999988888777 4566 899999999987777654432211101111223444568999999887764
Q ss_pred cHHHHHhccccCCEEEEecCC
Q 027668 119 PLMPLIGLLKSQGKLVLLGAP 139 (220)
Q Consensus 119 ~~~~~~~~l~~~g~iv~~g~~ 139 (220)
.+ ..-+.+++|-++..+|..
T Consensus 208 Pi-l~~~~l~~G~hI~aiGad 227 (330)
T COG2423 208 PV-LKAEWLKPGTHINAIGAD 227 (330)
T ss_pred Ce-ecHhhcCCCcEEEecCCC
Confidence 22 234567899999999874
No 465
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.89 E-value=0.0038 Score=48.39 Aligned_cols=73 Identities=21% Similarity=0.248 Sum_probs=50.4
Q ss_pred EEEEcC-chHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHHHcC-------Cc-E----EecCCCHHHHHHhcC--CccE
Q 027668 46 VGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG-------AD-S----FLVSRDQDEMQAAMG--TMDG 109 (220)
Q Consensus 46 vlI~G~-g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g-------~~-~----v~~~~~~~~~~~~~~--~~d~ 109 (220)
|||.|+ |++|..+++-+..++. +++++++++.++..+.+++. .. . +-|..+.+.+.+... ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 789987 9999999999998887 89999999988777777772 11 1 124556778887776 9999
Q ss_pred EEEcCCCcc
Q 027668 110 IIDTVSAVH 118 (220)
Q Consensus 110 vid~~g~~~ 118 (220)
||-++...+
T Consensus 81 VfHaAA~Kh 89 (293)
T PF02719_consen 81 VFHAAALKH 89 (293)
T ss_dssp EEE------
T ss_pred EEEChhcCC
Confidence 999988763
No 466
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.89 E-value=0.022 Score=35.74 Aligned_cols=34 Identities=29% Similarity=0.369 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCC-CeEEEEeC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVIST 74 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g-~~v~~~~~ 74 (220)
-++++++|+|+|.+|..+++.+...| .++.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999999999999999999885 47776655
No 467
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.88 E-value=0.0075 Score=46.60 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=54.8
Q ss_pred CCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC---Cc------EEecCCCHHHH--------HH
Q 027668 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---AD------SFLVSRDQDEM--------QA 102 (220)
Q Consensus 41 ~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~------~v~~~~~~~~~--------~~ 102 (220)
-.|+.++|.|+ .++|.+++..+...|++|+++.+++++.++..+.+. .. .+.|-.+.+.. ++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788999997 899999999999999999999999987666544422 11 22233333222 22
Q ss_pred hcCCccEEEEcCCCc
Q 027668 103 AMGTMDGIIDTVSAV 117 (220)
Q Consensus 103 ~~~~~d~vid~~g~~ 117 (220)
+.+++|+.++.+|..
T Consensus 86 ~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 86 FFGKIDILVNNAGAL 100 (270)
T ss_pred hCCCCCEEEEcCCcC
Confidence 235799999988875
No 468
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0068 Score=45.85 Aligned_cols=73 Identities=14% Similarity=0.172 Sum_probs=50.1
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHc----CCc-EE--ecCCCHHHHHHhc----CCccEEE
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD-SF--LVSRDQDEMQAAM----GTMDGII 111 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~~----~~~d~vi 111 (220)
++++|.|+ |.+|..+++.+...|++|+++++++++.+...+++ +.. .+ .|..+.+.+++.. ..+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 47899997 99999999999999999999999887655443322 111 11 2444444443322 3579999
Q ss_pred EcCCC
Q 027668 112 DTVSA 116 (220)
Q Consensus 112 d~~g~ 116 (220)
.++|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 88875
No 469
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.88 E-value=0.014 Score=45.99 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=31.3
Q ss_pred CCCEEEEEcC---chHHHHHHHHHHHCCCeEEEEeCCcccHH
Q 027668 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~~~~~~g~~v~~~~~~~~~~~ 80 (220)
.|+++||.|+ .++|.++++.+...|++|++ .+..++++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~ 48 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALN 48 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhh
Confidence 5789999998 78999999999999999988 55544433
No 470
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.87 E-value=0.0081 Score=46.98 Aligned_cols=85 Identities=22% Similarity=0.231 Sum_probs=56.8
Q ss_pred EEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH--
Q 027668 46 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL-- 123 (220)
Q Consensus 46 vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-- 123 (220)
|.|+|.|.+|...++.+...|.+|++.++++++.+.+ .+.|.... .+ ..+.....|+||.|+.........
T Consensus 2 IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~---~~---~~~~~~~aDivi~~vp~~~~~~~v~~ 74 (291)
T TIGR01505 2 VGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADEL-LAAGAVTA---ET---ARQVTEQADVIFTMVPDSPQVEEVAF 74 (291)
T ss_pred EEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCccc---CC---HHHHHhcCCEEEEecCCHHHHHHHHc
Confidence 6788999999999998888999999999998877666 34554321 11 223334689999998775333322
Q ss_pred -----HhccccCCEEEEec
Q 027668 124 -----IGLLKSQGKLVLLG 137 (220)
Q Consensus 124 -----~~~l~~~g~iv~~g 137 (220)
...++++..++..+
T Consensus 75 ~~~~~~~~~~~g~iivd~s 93 (291)
T TIGR01505 75 GENGIIEGAKPGKTLVDMS 93 (291)
T ss_pred CcchHhhcCCCCCEEEECC
Confidence 23344555555444
No 471
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.013 Score=44.78 Aligned_cols=75 Identities=24% Similarity=0.246 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcc----cHHHHHH---HcCCcE---EecCCCHHHHHHh-------
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAVE---RLGADS---FLVSRDQDEMQAA------- 103 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~----~~~~~~~---~~g~~~---v~~~~~~~~~~~~------- 103 (220)
.+++++|.|+ |.+|..+++.+...|++|+++..... ..+.+.+ ..+... ..|-.+.+.+.++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 4678999997 99999999999999998776654322 2222222 234321 2344454444332
Q ss_pred cCCccEEEEcCCC
Q 027668 104 MGTMDGIIDTVSA 116 (220)
Q Consensus 104 ~~~~d~vid~~g~ 116 (220)
.+++|++|.++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 2478999999885
No 472
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=96.87 E-value=0.012 Score=50.04 Aligned_cols=88 Identities=23% Similarity=0.315 Sum_probs=62.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (220)
.|+++.|+|.|.+|+.+++.++.+|++|++.++.... +.. ..+|...+ + +.++....|+|+.++...+
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-~~~g~~~~----~---l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERA-AQLGVELV----S---LDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHH-HhcCCEEE----c---HHHHHhhCCEEEEccCCChHhh
Confidence 4789999999999999999999999999999875432 222 35565433 1 3344456788888776542
Q ss_pred -cH-HHHHhccccCCEEEEecC
Q 027668 119 -PL-MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 119 -~~-~~~~~~l~~~g~iv~~g~ 138 (220)
.+ ...+..|+++..++.++.
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 22 346777888888887764
No 473
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=96.87 E-value=0.012 Score=45.37 Aligned_cols=99 Identities=18% Similarity=0.194 Sum_probs=63.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHCC--CeEEEEeCCcccHHHHHHHcC------Cc--EEecCCCHHHHHHhc-CCc
Q 027668 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG------AD--SFLVSRDQDEMQAAM-GTM 107 (220)
Q Consensus 39 ~~~~~~~vlI~G~g~~G~~~~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g------~~--~v~~~~~~~~~~~~~-~~~ 107 (220)
.+.++++||-+|+|+ |..+..+++..| .+|+.++.+++..+.+.++.. .. .++.. +.+.+ .+. +.|
T Consensus 70 ~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~-d~~~l-p~~~~sf 146 (261)
T PLN02233 70 GAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEG-DATDL-PFDDCYF 146 (261)
T ss_pred CCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEc-ccccC-CCCCCCE
Confidence 467899999999875 666777777765 489999999987776643322 11 11111 11111 111 268
Q ss_pred cEEEEcCCCc------ccHHHHHhccccCCEEEEecCCC
Q 027668 108 DGIIDTVSAV------HPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 108 d~vid~~g~~------~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
|.|+-..+-. ..++.+.+.|+|||+++......
T Consensus 147 D~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~ 185 (261)
T PLN02233 147 DAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK 185 (261)
T ss_pred eEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence 9997543322 23667888999999998876543
No 474
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.87 E-value=0.0038 Score=45.88 Aligned_cols=95 Identities=18% Similarity=0.167 Sum_probs=57.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCCcEE-ecCCCHHHHHHhcCCccEEEEcCC
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g 115 (220)
..++.+||-+|+|. |..+..+++. |.+|++++.+++..+.+.+ ..+...+ +...+.... ...+.||+|+.+..
T Consensus 28 ~~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~ 104 (197)
T PRK11207 28 VVKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVV 104 (197)
T ss_pred cCCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecc
Confidence 45678999999875 7777777764 8899999999875554422 2232211 111111111 12247999987643
Q ss_pred C--------cccHHHHHhccccCCEEEEec
Q 027668 116 A--------VHPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 116 ~--------~~~~~~~~~~l~~~g~iv~~g 137 (220)
. ...+..+.+.|+++|.++.+.
T Consensus 105 ~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 105 LMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 2 123556777889999965543
No 475
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.87 E-value=0.012 Score=46.07 Aligned_cols=87 Identities=22% Similarity=0.268 Sum_probs=57.7
Q ss_pred EEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH-
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 123 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 123 (220)
+|.|+|.|.+|...++.+...|.+|++.++++++.+.+ .+.|...+ .+ ..+.....|+||.|+.........
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~-~~~g~~~~---~~---~~e~~~~~d~vi~~vp~~~~~~~v~ 76 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEV-IAAGAETA---ST---AKAVAEQCDVIITMLPNSPHVKEVA 76 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCeec---CC---HHHHHhcCCEEEEeCCCHHHHHHHH
Confidence 68899999999998888888999999999888776665 34554321 11 222334689999998765433333
Q ss_pred ------HhccccCCEEEEecC
Q 027668 124 ------IGLLKSQGKLVLLGA 138 (220)
Q Consensus 124 ------~~~l~~~g~iv~~g~ 138 (220)
...++++..++.++.
T Consensus 77 ~~~~~~~~~~~~g~iiid~st 97 (296)
T PRK11559 77 LGENGIIEGAKPGTVVIDMSS 97 (296)
T ss_pred cCcchHhhcCCCCcEEEECCC
Confidence 234455555555543
No 476
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.87 E-value=0.0056 Score=49.59 Aligned_cols=76 Identities=9% Similarity=0.100 Sum_probs=51.5
Q ss_pred CCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCC
Q 027668 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 40 ~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~ 116 (220)
+..+.+|||.|+ |-+|..++..+...|.+|+++++........ ..++...+ .|..+.+.+.....++|+||.+++.
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~ 95 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAAD 95 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEcccc
Confidence 356789999997 9999999999999999999998754321111 11222222 2444445555555689999999853
No 477
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0097 Score=45.38 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCccc-HHHHHH---HcCCc---EEecCCCHHHHHH-------hcCC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVE---RLGAD---SFLVSRDQDEMQA-------AMGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~-~~~~~~---~~g~~---~v~~~~~~~~~~~-------~~~~ 106 (220)
++++++|.|+ |.+|..+++.+...|++|++++++++. .+.+.+ ..+.. ...|-.+.+.+.+ ..+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999997 899999999999999999999887542 233322 22321 1124444433332 2247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 478
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.86 E-value=0.0072 Score=45.83 Aligned_cols=75 Identities=20% Similarity=0.324 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEE-eCCcccHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCC
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVE---RLGADSF---LVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~-~~~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~~ 106 (220)
++.+++|.|+ |.+|+.+++.+...|++|++. .++.++.+.+.+ ..+.... .|-.+.+.+... .++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 999999999999999988764 555554444322 2343211 244444433322 237
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|.++|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 479
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0087 Score=44.66 Aligned_cols=73 Identities=22% Similarity=0.282 Sum_probs=51.7
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc-EEecCCCHHHHHHh----cC-CccEEEEcCCC
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA----MG-TMDGIIDTVSA 116 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~----~~-~~d~vid~~g~ 116 (220)
++++|.|+ |.+|..+++.+...|++|++++++.+..+++ +..+.. ...|-.+.+.+..+ .+ ++|++|.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL-QALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH-HhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46889987 9999999998888899999999987766555 344543 22344454444332 22 69999998876
Q ss_pred c
Q 027668 117 V 117 (220)
Q Consensus 117 ~ 117 (220)
.
T Consensus 81 ~ 81 (222)
T PRK06953 81 Y 81 (222)
T ss_pred c
Confidence 3
No 480
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.86 E-value=0.0076 Score=45.83 Aligned_cols=73 Identities=21% Similarity=0.272 Sum_probs=50.6
Q ss_pred CEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCccE
Q 027668 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTMDG 109 (220)
Q Consensus 44 ~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (220)
++++|.|+ |.+|..+++.+...|++|+++.+++++.+.+.++ .+... ..|-.+.+.+.+. .+.+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36899997 9999999999999999999999887655444333 23221 1244455444332 236899
Q ss_pred EEEcCCC
Q 027668 110 IIDTVSA 116 (220)
Q Consensus 110 vid~~g~ 116 (220)
+|.++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999876
No 481
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.86 E-value=0.017 Score=42.84 Aligned_cols=108 Identities=22% Similarity=0.328 Sum_probs=68.5
Q ss_pred CCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcC----CcEEe----cCCCHH----HHHHh---cCC
Q 027668 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADSFL----VSRDQD----EMQAA---MGT 106 (220)
Q Consensus 43 ~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~~v~----~~~~~~----~~~~~---~~~ 106 (220)
|+++++.|+ |++|+....-+...|.++.++..+.|..+..+ +|. ...++ |-.+.. .+++. .+.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 889999975 99999999999999999999988888765543 333 22222 111222 22222 247
Q ss_pred ccEEEEcCCCcc-----------------cHHHHHhcc-----ccCCEEEEecCCCCCcccCccccc
Q 027668 107 MDGIIDTVSAVH-----------------PLMPLIGLL-----KSQGKLVLLGAPEKPLELPAFPLL 151 (220)
Q Consensus 107 ~d~vid~~g~~~-----------------~~~~~~~~l-----~~~g~iv~~g~~~~~~~~~~~~~~ 151 (220)
.|++|+-+|-.. ....++..+ .+||.+|..++..+-.+.+..+++
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY 150 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY 150 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence 899999888642 112233333 267899998876654444444443
No 482
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.86 E-value=0.019 Score=44.05 Aligned_cols=95 Identities=22% Similarity=0.196 Sum_probs=62.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHC-CCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc-
Q 027668 40 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV- 117 (220)
Q Consensus 40 ~~~~~~vlI~G~g~~G~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~- 117 (220)
+.++++||-+|+|. |..+..+++.. +.+|+.++.++...+.+.+.+....++..+-.+. ...+.||+|+-.....
T Consensus 29 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~--~~~~~fD~v~~~~~l~~ 105 (258)
T PRK01683 29 LENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASW--QPPQALDLIFANASLQW 105 (258)
T ss_pred CcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhcc--CCCCCccEEEEccChhh
Confidence 57889999999874 77777888776 4699999999887766655443222222221111 0113799998654321
Q ss_pred -----ccHHHHHhccccCCEEEEec
Q 027668 118 -----HPLMPLIGLLKSQGKLVLLG 137 (220)
Q Consensus 118 -----~~~~~~~~~l~~~g~iv~~g 137 (220)
..+..+.+.|++||.++...
T Consensus 106 ~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 106 LPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 23666788999999998753
No 483
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.86 E-value=0.062 Score=41.94 Aligned_cols=39 Identities=28% Similarity=0.272 Sum_probs=34.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHH
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA 82 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~ 82 (220)
.+|.|+|+|.+|...++.+...|.+|++++.+++..+.+
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~ 42 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKA 42 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 578999999999999999998999999999998765555
No 484
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.85 E-value=0.051 Score=42.51 Aligned_cols=39 Identities=28% Similarity=0.385 Sum_probs=34.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHH
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA 82 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~ 82 (220)
.+|.|+|+|.+|...++.+...|.+|++++.++++.+.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 579999999999999999999999999999998876543
No 485
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.85 E-value=0.0057 Score=41.16 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=51.9
Q ss_pred EEEEEcC-chHHHHHHHHHHHCCC-eEEEEeCCcc-cHHHHHHHcC----C-cEEecCCCHHHHHHhcCCccEEEEcCCC
Q 027668 45 HVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPS-KKSEAVERLG----A-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (220)
Q Consensus 45 ~vlI~G~-g~~G~~~~~~~~~~g~-~v~~~~~~~~-~~~~~~~~~g----~-~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (220)
+|.|+|+ |.+|..+++++...-. +++.+..++. .-..+...++ . +..+...+.+.+ .++|+||.|++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEEL----SDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHH----TTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHh----hcCCEEEecCch
Confidence 5889996 9999999998887543 6554444433 3223322222 2 222222222222 689999999998
Q ss_pred cccHHHHHhccccCCEEEEecC
Q 027668 117 VHPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 117 ~~~~~~~~~~l~~~g~iv~~g~ 138 (220)
....+..-..+++|-+++..+.
T Consensus 77 ~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 77 GASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp HHHHHHHHHHHHTTSEEEESSS
T ss_pred hHHHHHHHHHhhCCcEEEeCCH
Confidence 7433344444566666666544
No 486
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.85 E-value=0.023 Score=43.81 Aligned_cols=96 Identities=15% Similarity=0.205 Sum_probs=70.0
Q ss_pred ccchhhhhhhhhhHhccCCCCCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHH
Q 027668 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (220)
Q Consensus 22 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (220)
.++|+..+.+..|+...---.|++|+|+|. ..+|.=++.++...|+.|++..+.... +
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~---------------------l 195 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKN---------------------L 195 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 356666666666665543357999999995 899999999999999988776643221 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHhccccCCEEEEecCCC
Q 027668 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (220)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~iv~~g~~~ 140 (220)
++.+...|++|-++|.+..+. -+.+++|..++.+|...
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 196 KEVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeeccc
Confidence 233346899999999987543 34589999999988644
No 487
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.84 E-value=0.0061 Score=49.06 Aligned_cols=35 Identities=34% Similarity=0.606 Sum_probs=30.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCc
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 76 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~ 76 (220)
.+.+|+|+|+|++|..++..+...|. ++++++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 34789999999999999999999999 788777763
No 488
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=96.84 E-value=0.035 Score=41.27 Aligned_cols=102 Identities=16% Similarity=0.253 Sum_probs=71.7
Q ss_pred CCCCCEEEEEc-C--chHHHHHHHHHHHCCCeEEEEeCCcc---cHHHHHHHcCCcEEe--cCCCHHHH-------HHhc
Q 027668 40 DKPGMHVGVVG-L--GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADSFL--VSRDQDEM-------QAAM 104 (220)
Q Consensus 40 ~~~~~~vlI~G-~--g~~G~~~~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~v~--~~~~~~~~-------~~~~ 104 (220)
+-.|++.||.| + -+++.-.++.++..|++...+-..+. +.+++.+++|.+.++ |-.+.+.+ ++.-
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 35789999998 3 58999999999999999888877754 455566677776554 33333333 3333
Q ss_pred CCccEEEEcCCCcc-----------------------------cHHHHHhccccCCEEEEecCCCC
Q 027668 105 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 105 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~g~iv~~g~~~~ 141 (220)
+++|.++-|.+..+ ..+.+...|+.||.++.+.....
T Consensus 83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs 148 (259)
T COG0623 83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS 148 (259)
T ss_pred CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc
Confidence 58999998888753 22445667888999987766543
No 489
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.84 E-value=0.0079 Score=46.16 Aligned_cols=75 Identities=16% Similarity=0.279 Sum_probs=49.8
Q ss_pred CCCEEEEEcC---chHHHHHHHHHHHCCCeEEEEeCC---cccHHHHHHHcCCc--EEecCCCHHHHHHh-------cCC
Q 027668 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTS---PSKKSEAVERLGAD--SFLVSRDQDEMQAA-------MGT 106 (220)
Q Consensus 42 ~~~~vlI~G~---g~~G~~~~~~~~~~g~~v~~~~~~---~~~~~~~~~~~g~~--~v~~~~~~~~~~~~-------~~~ 106 (220)
.++++||.|+ +++|.++++.+...|++|+++.+. .++.+++.++++.. ...|-.+.+.++++ .+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999994 589999999999999999887543 33344444445532 22344444433322 247
Q ss_pred ccEEEEcCCC
Q 027668 107 MDGIIDTVSA 116 (220)
Q Consensus 107 ~d~vid~~g~ 116 (220)
+|++|+++|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999999874
No 490
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.0088 Score=47.13 Aligned_cols=74 Identities=22% Similarity=0.241 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCc----------ccHHHHHH---HcCCcE---EecCCCHHHHHHh-
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----------SKKSEAVE---RLGADS---FLVSRDQDEMQAA- 103 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~----------~~~~~~~~---~~g~~~---v~~~~~~~~~~~~- 103 (220)
.+++++|.|+ +++|+++++.+...|++|++++++. ++.+.+.+ ..|... ..|-.+.+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4689999997 8999999999999999999998863 23333322 334221 2244444433322
Q ss_pred ------cCCccEEEEcC-C
Q 027668 104 ------MGTMDGIIDTV-S 115 (220)
Q Consensus 104 ------~~~~d~vid~~-g 115 (220)
.+.+|++|+++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 24799999988 6
No 491
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.83 E-value=0.043 Score=42.84 Aligned_cols=38 Identities=32% Similarity=0.457 Sum_probs=34.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHH
Q 027668 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (220)
Q Consensus 44 ~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~ 81 (220)
.+|.|+|+|.+|...++.+...|.+|++.+.+++..+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 47899999999999999988899999999999987665
No 492
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.83 E-value=0.011 Score=49.04 Aligned_cols=88 Identities=25% Similarity=0.353 Sum_probs=58.2
Q ss_pred EEEEEc-CchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc---H
Q 027668 45 HVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP---L 120 (220)
Q Consensus 45 ~vlI~G-~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~---~ 120 (220)
+|.|+| .|.+|.+++..++..|.+|+++++++++....+.++|.... .+ ..+.....|+||-|+..... +
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~---~~---~~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA---ND---NIDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec---cC---HHHHhccCCEEEEecCHHHHHHHH
Confidence 588998 59999999999999999999999987765555566775311 11 11223467888888776421 2
Q ss_pred HHHHhccccCCEEEEecC
Q 027668 121 MPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 121 ~~~~~~l~~~g~iv~~g~ 138 (220)
......++++..++.++.
T Consensus 76 ~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHhhCCCCCEEEEccc
Confidence 223334455666666654
No 493
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0045 Score=47.12 Aligned_cols=72 Identities=24% Similarity=0.291 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (220)
.++++||.|+ |.+|..+++.+...|++|++++++.++ .. ...+.. ...|..+.+.+++. .+.+|++|.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999997 999999999999999999999987653 11 111122 12344444433322 247899999
Q ss_pred cCCC
Q 027668 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
++|.
T Consensus 82 ~ag~ 85 (252)
T PRK07856 82 NAGG 85 (252)
T ss_pred CCCC
Confidence 9875
No 494
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.83 E-value=0.005 Score=45.95 Aligned_cols=99 Identities=20% Similarity=0.336 Sum_probs=57.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCCcccHHHHHH-------HcCC----------------cEEecCC--
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE-------RLGA----------------DSFLVSR-- 95 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~-------~~g~----------------~~v~~~~-- 95 (220)
+..+|+|+|.|++|.+++..+...|. ++..++.+.-......+ ..|- ..|...+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 34789999999999999999999999 77777765321111111 1111 0111011
Q ss_pred -CHHHHHHhcC-CccEEEEcCCCcccHHHHHh-ccccCCEEEEecCCC
Q 027668 96 -DQDEMQAAMG-TMDGIIDTVSAVHPLMPLIG-LLKSQGKLVLLGAPE 140 (220)
Q Consensus 96 -~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~-~l~~~g~iv~~g~~~ 140 (220)
.++.+.++.. +||+||||...-..=-.++. +.+.+=.++..+...
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 1344555554 89999999987642222333 444455566555443
No 495
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.82 E-value=0.0099 Score=46.66 Aligned_cols=89 Identities=18% Similarity=0.222 Sum_probs=57.3
Q ss_pred EEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcE-----EecCCCHHHHHHhcCCccEEEEcCCCccc
Q 027668 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----FLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (220)
Q Consensus 45 ~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-----v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (220)
+|+|+|+|.+|...+..+...|.+|+++++++++.+.+. +.|... .......+...+. ..+|+||-|+....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~- 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALN-ENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ- 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHH-HcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence 589999999999999988888999999999777666653 335421 0000000111122 57999999988764
Q ss_pred HHHHHhccc----cCCEEEEe
Q 027668 120 LMPLIGLLK----SQGKLVLL 136 (220)
Q Consensus 120 ~~~~~~~l~----~~g~iv~~ 136 (220)
+..++..++ ++..++.+
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEe
Confidence 455555444 34456554
No 496
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=96.82 E-value=0.0091 Score=47.19 Aligned_cols=75 Identities=21% Similarity=0.305 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-chHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH--Hc-C----CcEE-ecCCCHHHHHHhcCCccEEEE
Q 027668 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RL-G----ADSF-LVSRDQDEMQAAMGTMDGIID 112 (220)
Q Consensus 42 ~~~~vlI~G~-g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~--~~-g----~~~v-~~~~~~~~~~~~~~~~d~vid 112 (220)
.+.+|||.|+ |-+|..++..+...|.+|++++++.+....... .+ + ...+ .|..+.+.+.+...++|+||.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 3578999997 999999999999999999988887654222211 11 1 1111 133344455555668999999
Q ss_pred cCCC
Q 027668 113 TVSA 116 (220)
Q Consensus 113 ~~g~ 116 (220)
+++.
T Consensus 83 ~A~~ 86 (322)
T PLN02662 83 TASP 86 (322)
T ss_pred eCCc
Confidence 8863
No 497
>PLN02244 tocopherol O-methyltransferase
Probab=96.82 E-value=0.012 Score=47.03 Aligned_cols=97 Identities=21% Similarity=0.205 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHH---HcCC-c-EEecCCCHHHHHHhcCCccEEEEcCC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGA-D-SFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~-~-~v~~~~~~~~~~~~~~~~d~vid~~g 115 (220)
+++++||-+|+|. |..+..+++..|++|+.++.++...+.+.+ +.|. + ..+...+........+.||+|+-...
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~ 195 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMES 195 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCc
Confidence 6788999999874 667778888789999999999875544422 2232 1 11111111111001137999986433
Q ss_pred Cc------ccHHHHHhccccCCEEEEecC
Q 027668 116 AV------HPLMPLIGLLKSQGKLVLLGA 138 (220)
Q Consensus 116 ~~------~~~~~~~~~l~~~g~iv~~g~ 138 (220)
.. ..++.+.+.|++||++++...
T Consensus 196 ~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 196 GEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred hhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 21 135677889999999998754
No 498
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.82 E-value=0.016 Score=44.61 Aligned_cols=34 Identities=32% Similarity=0.603 Sum_probs=30.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCC-eEEEEeCC
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~-~v~~~~~~ 75 (220)
.+.+|+|+|+|++|..++..+...|. ++++++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999997 88888765
No 499
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.81 E-value=0.01 Score=41.72 Aligned_cols=88 Identities=22% Similarity=0.229 Sum_probs=56.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCeEEEEeCCcccHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 027668 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (220)
Q Consensus 42 ~~~~vlI~G~g~~G~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (220)
.+++|.|+|-|+.|.+.++-++..|.+|++..+...+..+.+++-|.+.. .+.+.....|+|+-.+....
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~-------~~~eAv~~aDvV~~L~PD~~q~~ 75 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM-------SVAEAVKKADVVMLLLPDEVQPE 75 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC-------EHHHHHHC-SEEEE-S-HHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec-------cHHHHHhhCCEEEEeCChHHHHH
Confidence 47899999999999999999999999999999988744444477786522 23334457899998887641
Q ss_pred cH-HHHHhccccCCEEEEe
Q 027668 119 PL-MPLIGLLKSQGKLVLL 136 (220)
Q Consensus 119 ~~-~~~~~~l~~~g~iv~~ 136 (220)
.+ +.....|+++-.++..
T Consensus 76 vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 76 VYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp HHHHHHHHHS-TT-EEEES
T ss_pred HHHHHHHhhCCCCCEEEeC
Confidence 12 2344567777766654
No 500
>PRK06823 ornithine cyclodeaminase; Validated
Probab=96.81 E-value=0.062 Score=42.56 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHH-CCC-eEEEEeCCcccHHHHHHHc---CCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 027668 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (220)
Q Consensus 41 ~~~~~vlI~G~g~~G~~~~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (220)
+..+++.|+|+|..+..-++.+.. +.. +|.+.+++.++.+.+++.+ +...... +..++...+.|+|+.|++
T Consensus 126 ~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~----~~~~~av~~ADIV~taT~ 201 (315)
T PRK06823 126 QHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTT----LDAAEVAHAANLIVTTTP 201 (315)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEE----CCHHHHhcCCCEEEEecC
Confidence 445788899999999888876664 455 8999999999877665433 4332211 123344568999999887
Q ss_pred CcccHHHHHhccccCCEEEEecCCCC
Q 027668 116 AVHPLMPLIGLLKSQGKLVLLGAPEK 141 (220)
Q Consensus 116 ~~~~~~~~~~~l~~~g~iv~~g~~~~ 141 (220)
....+- -.+.+++|-.+..+|....
T Consensus 202 s~~P~~-~~~~l~~G~hi~~iGs~~p 226 (315)
T PRK06823 202 SREPLL-QAEDIQPGTHITAVGADSP 226 (315)
T ss_pred CCCcee-CHHHcCCCcEEEecCCCCc
Confidence 654321 2346789999999987653
Done!