BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027671
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2
PE=1 SV=1
Length = 309
Score = 267 bits (683), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 158/211 (74%), Gaps = 2/211 (0%)
Query: 1 MAKS-SGINPELLLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQ 59
MA S S N +LLL+ KLPE +TY ERD AIYALG+GACG+DAVD+DELK+VYH NGQ
Sbjct: 1 MATSDSEFNSDLLLAHKLPETRYTYNERDVAIYALGIGACGQDAVDSDELKFVYHRNGQD 60
Query: 60 FIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIA 119
IQVLPTF++LF+ G +DLPG ++DP LLLHGQQY+E+Y+P PS AS+ N+ +A
Sbjct: 61 LIQVLPTFASLFTLGSLTEG-LDLPGFKYDPSLLLHGQQYIEIYRPLPSKASLINKVSLA 119
Query: 120 GLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSV 179
GL DKGKAAILE+ET+SY SGELLCMNR T FLRGAGGFSNSSQPFSY Y +
Sbjct: 120 GLQDKGKAAILELETRSYEEGSGELLCMNRTTVFLRGAGGFSNSSQPFSYKNYPSNQGLA 179
Query: 180 VKIPKSQPFAVFEDYTQPSQACSIKFHYCWN 210
VKIP+ QP V E+ TQPSQA + +N
Sbjct: 180 VKIPQRQPLTVCEERTQPSQALLYRLSGDYN 210
>sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens
GN=HSD17B4 PE=1 SV=3
Length = 736
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 108/200 (54%), Gaps = 17/200 (8%)
Query: 13 LSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFS 72
+ QKLP ++ YTE +A +YALGVGA +D D LK++Y G LPTF +
Sbjct: 328 IGQKLPPFSYAYTELEAIMYALGVGASIKDPKD---LKFIYE--GSSDFSCLPTFGVIIG 382
Query: 73 FE-LEPSGAIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILE 131
+ + G ++PGL + +LHG+QY+ELYKP P + ++ EA +A + DKG ++
Sbjct: 383 QKSMMGGGLAEIPGLSINFAKVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVII 442
Query: 132 IETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSV-VKIPKSQPFAV 190
++ SY+ + EL+C N+ + FL G+GGF K + V V V IP P AV
Sbjct: 443 MDVYSYSEK--ELICHNQFSLFLVGSGGFGG--------KRTSDKVKVAVAIPNRPPDAV 492
Query: 191 FEDYTQPSQACSIKFHYCWN 210
D T +QA + WN
Sbjct: 493 LTDTTSLNQAALYRLSGDWN 512
>sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=fox-2 PE=1 SV=1
Length = 894
Score = 106 bits (265), Expect = 1e-22, Method: Composition-based stats.
Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 22 FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAI 81
+T+TERD +Y LG+GA D +KY++ G + +V+PTF + F E +
Sbjct: 628 YTFTERDVCLYNLGIGAKRTD------IKYIFE--GNEDFEVVPTFGVIPPFNTEMPFSF 679
Query: 82 DLPGLQHDPRLLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAE 140
D P +LLHG+QY+E+ K P P+S + ++ + + DKG AAI++ ++NAE
Sbjct: 680 DDIVPNFSPMMLLHGEQYLEVRKYPIPTSGRLVSKGKLLEVVDKGSAAIVKQGITTFNAE 739
Query: 141 SGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQA 200
+GE L N MT FLRG GGF +P + + K P P AV E T QA
Sbjct: 740 TGEELFYNEMTVFLRGCGGFGGQKKPAD----RGASTAANKPPARSPDAVVEVQTTEEQA 795
>sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme type 2 OS=Mus musculus
GN=Hsd17b4 PE=1 SV=3
Length = 735
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 13 LSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFS 72
+ KLP + +YTE + +YALGVGA ++ D LK+VY G LPTF + +
Sbjct: 327 VGHKLPSFSSSYTELQSIMYALGVGASVKNPKD---LKFVYE--GSADFSCLPTFGVIVA 381
Query: 73 FELEPSGAI-DLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILE 131
+ +G + ++PGL + LHG+QY+ELYKP P S ++ EA IA + DKG ++
Sbjct: 382 QKSMMNGGLAEVPGLSFNFAKALHGEQYLELYKPLPRSGELKCEAVIADILDKGSGVVIV 441
Query: 132 IETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVF 191
++ SY+ + EL+C N+ + F S F + + V +P P AV
Sbjct: 442 MDVYSYSGK--ELICYNQFSV-------FVVGSGGFGGKRTSEKLKAAVAVPNRPPDAVL 492
Query: 192 EDYTQPSQACSIKFHYCWN 210
D T +QA + WN
Sbjct: 493 RDATSLNQAALYRLSGDWN 511
>sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus
GN=Hsd17b4 PE=1 SV=3
Length = 735
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALF 71
++ KLP + +YTE +YALGVGA ++ D LK+VY G LPTF +
Sbjct: 326 VVGHKLPSFSSSYTELQCIMYALGVGASVKNPKD---LKFVYE--GSADFSCLPTFGVIV 380
Query: 72 SFE-LEPSGAIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAIL 130
+ + L G ++PGL + +LHG+QY+ELYKP P S ++ EA IA + DKG ++
Sbjct: 381 AQKSLMSGGLAEVPGLSINFAKVLHGEQYLELYKPLPRSGELKCEAVIADILDKGSGIVI 440
Query: 131 EIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAV 190
++ SY+ + EL+C N+ + F S F + + V +P P AV
Sbjct: 441 VMDVYSYSGK--ELICYNQFSV-------FVVGSGGFGGKRTSEKLKAAVAVPSRPPDAV 491
Query: 191 FEDYTQPSQAC 201
D T +QA
Sbjct: 492 LRDTTSLNQAA 502
>sp|Q9VXJ0|DHB4_DROME Peroxisomal multifunctional enzyme type 2 OS=Drosophila
melanogaster GN=Mfe2 PE=1 SV=1
Length = 598
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 19 EKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPS 78
E F + ++ YALG+GA ++A D ++++Y EN F +PTF L L+ S
Sbjct: 315 EDAFEFNSKELITYALGIGASVKNAKD---MRFLY-ENDADF-AAIPTFFVLPGLLLQMS 369
Query: 79 G----AIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIET 134
+ LP Q D +LHG+QY+E+ P+S ++ + + DKG A++ +
Sbjct: 370 TDKLLSKALPNSQVDFSNILHGEQYLEIVDDLPTSGTLLTNGKVFDVMDKGSGAVVVTNS 429
Query: 135 KSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDY 194
+S++ ESG LL N+ T F+ GAG F P + +P+ P QP A +
Sbjct: 430 ESFD-ESGRLLVRNQSTTFIVGAGKFGGKKDPIA----GVVPLQ--PAPNRQPDATVQYT 482
Query: 195 TQPSQAC 201
T QA
Sbjct: 483 TSEDQAA 489
>sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=1
SV=1
Length = 900
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 10/146 (6%)
Query: 14 SQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSF 73
S++L + F YT +D +Y LG+G + ELKY Y EN F QVLPTF+ +
Sbjct: 616 SKELDDGLFKYTTKDCILYNLGLGCTSK------ELKYTY-ENDPDF-QVLPTFAVIPFM 667
Query: 74 ELEPSGAIDLPGLQHDPRLLLHGQQYMELYKP-FPSSASIRNEACIAGLHDK-GKAAILE 131
+ + A+D + +LLHG+QY +L P PS+ +++ A + DK GKAA++
Sbjct: 668 QATATLAMDNLVDNFNYAMLLHGEQYFKLCTPTMPSNGTLKTLAKPLQVLDKNGKAALVV 727
Query: 132 IETKSYNAESGELLCMNRMTAFLRGA 157
++Y+ ++ +L+ N + F+RGA
Sbjct: 728 GGFETYDIKTKKLIAYNEGSFFIRGA 753
>sp|Q54XZ0|MFEB_DICDI Probable enoyl-CoA hydratase 2 OS=Dictyostelium discoideum GN=mfeB
PE=2 SV=1
Length = 294
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALF 71
+++ K+ + T +D A+YA+ +G CG+ LK+VY G LPT +F
Sbjct: 8 VINHKIKPIEYNLTRKDVALYAISLG-CGKK-----HLKFVYE--GSDNFSALPTLGVIF 59
Query: 72 SFEL---EPSGAIDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAA 128
++ S ID G++ DP +LLHG+Q +E+ P E+ I L+DKGK A
Sbjct: 60 PGQMIVDVISEGID--GIEFDPMMLLHGEQELEILNEIPVEGVFVTESKITNLYDKGKGA 117
Query: 129 ILEIETKSYNAESGELLCMN 148
+L ++ + SG+ + N
Sbjct: 118 LLILQCITSEKSSGKPIFKN 137
>sp|P22414|FOX2_CANTR Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis
PE=1 SV=2
Length = 906
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 24 YTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDL 83
+ +RD +Y + +GA + +LKYVY EN F QV+PTF L +F S
Sbjct: 635 FDDRDVILYNIALGATTK------QLKYVY-ENDSDF-QVIPTFGHLITFNSGKSQNSFA 686
Query: 84 PGLQH-DPRLLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAES 141
L++ +P LLLHG+ Y++++ P P+ I+ KG ++ +KS + +S
Sbjct: 687 KLLRNFNPMLLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKS 746
Query: 142 GELLCMNRMTAFLR 155
GEL+ N T F+R
Sbjct: 747 GELIYSNEATYFIR 760
>sp|A8LC73|Y6066_FRASN UPF0336 protein Franean1_6066 OS=Frankia sp. (strain EAN1pec)
GN=Franean1_6066 PE=3 SV=1
Length = 151
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 84 PGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGE 143
P L D L++HG Q L++P + + + +A + G+ +L + + + SGE
Sbjct: 75 PALGLDYSLVVHGDQRFTLHRPVVAGDELVVRSTLASIRSVGRNEVL-VTSYEFTTTSGE 133
Query: 144 LLCMNRMTAFLRG 156
L+ + RG
Sbjct: 134 LVAEGTCSLVSRG 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,562,588
Number of Sequences: 539616
Number of extensions: 3392660
Number of successful extensions: 6629
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6607
Number of HSP's gapped (non-prelim): 11
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)