Your job contains 1 sequence.
>027673
MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR
NLMYLAAIADAQPQPPSVHAQFSSGGIMQPGAHYMQHQQSQPMTPQSLMAARSSMVYSQQ
QFSVLQQQQALHGQLGMSSGGSSGLHMLQSEGSTAGGSGSLGGGGFPDFGRGSSGEGLHS
RGMGSKHDIGSSGSAEGRGGSSGSQDGGETLYLKGADDGN
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027673
(220 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2148810 - symbol:AN3 "ANGUSTIFOLIA 3" species:... 429 2.3e-44 2
TAIR|locus:2134558 - symbol:GIF3 "GRF1-interacting factor... 245 8.0e-21 1
TAIR|locus:2035232 - symbol:GIF2 "GRF1-interacting factor... 219 8.4e-21 2
UNIPROTKB|Q15532 - symbol:SS18 "Protein SSXT" species:960... 147 4.3e-11 2
UNIPROTKB|F1NK13 - symbol:SS18 "Uncharacterized protein" ... 145 7.2e-11 2
UNIPROTKB|F1SBA6 - symbol:SS18 "Uncharacterized protein" ... 144 9.1e-11 2
MGI|MGI:107708 - symbol:Ss18 "synovial sarcoma translocat... 140 1.5e-10 2
UNIPROTKB|F1NW13 - symbol:SS18L1 "Uncharacterized protein... 153 2.6e-10 1
UNIPROTKB|B4DLD3 - symbol:SS18 "cDNA FLJ58120, highly sim... 135 7.0e-10 2
UNIPROTKB|Q08E31 - symbol:SS18L1 "Calcium-responsive tran... 149 7.2e-10 1
UNIPROTKB|O75177 - symbol:SS18L1 "Calcium-responsive tran... 148 8.9e-10 1
RGD|1311919 - symbol:Ss18 "synovial sarcoma translocation... 146 1.5e-09 1
UNIPROTKB|D4ABC5 - symbol:Ss18 "Protein Ss18" species:101... 146 1.6e-09 1
RGD|621847 - symbol:Ss18l1 "synovial sarcoma translocatio... 144 2.5e-09 1
MGI|MGI:2444061 - symbol:Ss18l1 "synovial sarcoma translo... 144 2.5e-09 1
UNIPROTKB|J3KT22 - symbol:SS18 "Protein SSXT" species:960... 135 3.6e-09 1
UNIPROTKB|J3QQX5 - symbol:SS18 "Protein SSXT" species:960... 135 3.6e-09 1
UNIPROTKB|A5D7A1 - symbol:SS18 "SS18 protein" species:991... 139 8.1e-09 1
UNIPROTKB|J3QLJ7 - symbol:SS18 "Protein SSXT" species:960... 130 1.2e-08 1
MGI|MGI:1349474 - symbol:Deb1 "differentially expressed i... 128 2.0e-08 1
ZFIN|ZDB-GENE-030131-4867 - symbol:ss18 "synovial sarcoma... 134 2.6e-08 1
UNIPROTKB|F1PU82 - symbol:SS18L1 "Uncharacterized protein... 131 6.5e-08 1
ZFIN|ZDB-GENE-050417-268 - symbol:zgc:112097 "zgc:112097"... 114 6.1e-07 1
DICTYBASE|DDB_G0276877 - symbol:mybK "SSXT family protein... 124 1.2e-06 1
UNIPROTKB|I3L763 - symbol:SS18L1 "Uncharacterized protein... 101 7.9e-05 1
>TAIR|locus:2148810 [details] [associations]
symbol:AN3 "ANGUSTIFOLIA 3" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003713
"transcription coactivator activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048366 "leaf development"
evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEP;RCA;IMP] [GO:0009955 "adaxial/abaxial pattern
specification" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0008283
GO:GO:0006351 GO:GO:0003713 GO:GO:0048366 EMBL:AF272705
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 EMBL:AY102639
EMBL:BT002848 EMBL:BT004462 IPI:IPI00531890 RefSeq:NP_198216.2
UniGene:At.22564 IntAct:Q8L8A5 STRING:Q8L8A5 PRIDE:Q8L8A5
EnsemblPlants:AT5G28640.1 GeneID:832968 KEGG:ath:AT5G28640
TAIR:At5g28640 eggNOG:NOG277145 HOGENOM:HOG000239707
InParanoid:Q8L8A5 OMA:ILHGEAS PhylomeDB:Q8L8A5
ProtClustDB:CLSN2680319 Genevestigator:Q8L8A5 GO:GO:0009955
Uniprot:Q8L8A5
Length = 210
Score = 429 (156.1 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 88/113 (77%), Positives = 100/113 (88%)
Query: 13 AAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ 72
A YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIAD+Q
Sbjct: 13 AGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQ 72
Query: 73 PQPPSVHAQFSS--GGIMQP--GAHYMQHQQS---QPMTPQSLMAARSSMVYS 118
PQPPSVH+Q+ S GG++Q G+HY+Q QQ+ Q MT QSLMAARSSM+Y+
Sbjct: 73 PQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYA 125
Score = 55 (24.4 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 10/12 (83%), Positives = 11/12 (91%)
Query: 209 ETLYLKGADDGN 220
ETLYLK +DDGN
Sbjct: 199 ETLYLKSSDDGN 210
>TAIR|locus:2134558 [details] [associations]
symbol:GIF3 "GRF1-interacting factor 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0003713 "transcription coactivator activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008283 "cell
proliferation" evidence=IEP] [GO:0048366 "leaf development"
evidence=IMP] GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0008283 GO:GO:0006351 GO:GO:0003713
EMBL:AL161472 GO:GO:0048366 EMBL:AF013294 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 HOGENOM:HOG000239707 EMBL:AY102641
EMBL:AF378866 EMBL:AY052732 IPI:IPI00548765 PIR:T01561
RefSeq:NP_567194.1 UniGene:At.23576 EnsemblPlants:AT4G00850.1
GeneID:827995 KEGG:ath:AT4G00850 TAIR:At4g00850 eggNOG:NOG331134
InParanoid:Q93VH6 OMA:GANNGMH PhylomeDB:Q93VH6
ProtClustDB:CLSN2917468 Genevestigator:Q93VH6 Uniprot:Q93VH6
Length = 223
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 52/85 (61%), Positives = 63/85 (74%)
Query: 18 NNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQPQPPS 77
NN+TT+ IQ+YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+NLMYLAAIADAQPQPP+
Sbjct: 19 NNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIADAQPQPPA 78
Query: 78 VHAQFSSGGIMQPGAHYMQHQQSQP 102
A +SG M P A QP
Sbjct: 79 --ATLTSGA-MTPQAMAPNPSSMQP 100
>TAIR|locus:2035232 [details] [associations]
symbol:GIF2 "GRF1-interacting factor 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0003713 "transcription coactivator activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008283 "cell
proliferation" evidence=IEP] [GO:0048366 "leaf development"
evidence=IMP] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009410 "response to xenobiotic stimulus"
evidence=RCA] [GO:0010048 "vernalization response" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048522 "positive regulation of cellular process"
evidence=RCA] EMBL:CP002684 GO:GO:0005634 GO:GO:0008283
GO:GO:0003713 GO:GO:0048366 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 IPI:IPI00938923 RefSeq:NP_001154298.1 UniGene:At.11894
UniGene:At.71103 PRIDE:F4HQJ3 EnsemblPlants:AT1G01160.2
GeneID:839278 KEGG:ath:AT1G01160 OMA:IMAIMEN Uniprot:F4HQJ3
Length = 229
Score = 219 (82.2 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 49/85 (57%), Positives = 62/85 (72%)
Query: 28 YLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQPQPPS--------VH 79
YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+NLMYLAAIADAQP PP+ V
Sbjct: 64 YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 123
Query: 80 AQFSS--GGIMQPGAHYMQHQQSQP 102
AQ ++ G MQP +++MQH Q+ P
Sbjct: 124 AQMATPHSG-MQPPSYFMQHPQASP 147
Score = 40 (19.1 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 18 NNVTTDHIQQYL 29
NN+TT+ IQ+ L
Sbjct: 20 NNITTEQIQKML 31
>UNIPROTKB|Q15532 [details] [associations]
symbol:SS18 "Protein SSXT" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] GO:GO:0005634 GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0006351
EMBL:CH471088 GO:GO:0000902 Orphanet:3273 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 UniGene:Hs.129261 EMBL:X79200
EMBL:S79894 EMBL:X79201 EMBL:AF343880 EMBL:EF445031 EMBL:BC096223
IPI:IPI00452919 IPI:IPI00940186 PIR:S46269 RefSeq:NP_001007560.1
RefSeq:NP_005628.2 ProteinModelPortal:Q15532 IntAct:Q15532
STRING:Q15532 PhosphoSite:Q15532 DMDM:20141795 PaxDb:Q15532
PRIDE:Q15532 DNASU:6760 Ensembl:ENST00000269137
Ensembl:ENST00000415083 GeneID:6760 KEGG:hsa:6760 UCSC:uc002kvm.3
CTD:6760 GeneCards:GC18M023596 HGNC:HGNC:11340 MIM:600192
neXtProt:NX_Q15532 PharmGKB:PA36164 eggNOG:NOG274014
InParanoid:Q15532 KO:K15623 OrthoDB:EOG4RFKTH PhylomeDB:Q15532
ChiTaRS:SS18 GenomeRNAi:6760 NextBio:26388 ArrayExpress:Q15532
Bgee:Q15532 CleanEx:HS_SS18 Genevestigator:Q15532
GermOnline:ENSG00000141380 Uniprot:Q15532
Length = 418
Score = 147 (56.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LD+N LI I++SQN GK SEC++ Q L NL+YLA IAD+
Sbjct: 16 ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPG 91
P PP+ + GG+ Q G
Sbjct: 76 PAPPTQNMPMGPGGMNQSG 94
Score = 34 (17.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 88 MQPGAHYMQHQQ 99
MQP M HQQ
Sbjct: 198 MQPNQGPMMHQQ 209
>UNIPROTKB|F1NK13 [details] [associations]
symbol:SS18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 GeneTree:ENSGT00500000044808
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 OMA:IQCIMDS
EMBL:AADN02021370 EMBL:AADN02021371 IPI:IPI00822142
Ensembl:ENSGALT00000024397 ArrayExpress:F1NK13 Uniprot:F1NK13
Length = 420
Score = 145 (56.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 34/79 (43%), Positives = 45/79 (56%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LDEN LI I++ QN GK SEC++ Q L NL+YLA IAD+
Sbjct: 17 ITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 76
Query: 73 PQPPSVHAQFSSGGIMQPG 91
P PP+ + GG+ Q G
Sbjct: 77 PAPPTQNMPMGPGGMSQSG 95
Score = 34 (17.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 88 MQPGAHYMQHQQ 99
MQP M HQQ
Sbjct: 200 MQPNQGPMMHQQ 211
>UNIPROTKB|F1SBA6 [details] [associations]
symbol:SS18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IEA]
[GO:0007243 "intracellular protein kinase cascade" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0000902
"cell morphogenesis" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0000902
GO:GO:0048013 GO:GO:0005881 GO:GO:0030374
GeneTree:ENSGT00500000044808 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 OMA:IQCIMDS EMBL:CU442718 EMBL:CU862003
Ensembl:ENSSSCT00000004116 Uniprot:F1SBA6
Length = 418
Score = 144 (55.7 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 34/79 (43%), Positives = 45/79 (56%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LDEN LI I++ QN GK SEC++ Q L NL+YLA IAD+
Sbjct: 16 ITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPG 91
P PP+ + GG+ Q G
Sbjct: 76 PAPPTQNMPMGPGGMNQSG 94
Score = 34 (17.0 bits), Expect = 9.1e-11, Sum P(2) = 9.1e-11
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 88 MQPGAHYMQHQQ 99
MQP M HQQ
Sbjct: 198 MQPNQGPMMHQQ 209
>MGI|MGI:107708 [details] [associations]
symbol:Ss18 "synovial sarcoma translocation, Chromosome 18"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IDA] [GO:0000902 "cell morphogenesis"
evidence=IGI;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=ISO] [GO:0042493 "response to drug"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IDA] MGI:MGI:107708
GO:GO:0005634 GO:GO:0000226 GO:GO:0042493 GO:GO:0045944
GO:GO:0007243 GO:GO:0006351 GO:GO:0000902 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 GeneTree:ENSGT00500000044808
HOGENOM:HOG000048717 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 CTD:6760 eggNOG:NOG274014 KO:K15623
OrthoDB:EOG4RFKTH EMBL:X93357 EMBL:AY055726 EMBL:AK166053
IPI:IPI00123532 RefSeq:NP_033306.2 UniGene:Mm.31761
ProteinModelPortal:Q62280 IntAct:Q62280 STRING:Q62280
PhosphoSite:Q62280 PRIDE:Q62280 Ensembl:ENSMUST00000040924
GeneID:268996 KEGG:mmu:268996 InParanoid:Q3TM96 OMA:IQCIMDS
NextBio:392632 Bgee:Q62280 CleanEx:MM_SS18 Genevestigator:Q62280
GermOnline:ENSMUSG00000037013 Uniprot:Q62280
Length = 418
Score = 140 (54.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 34/79 (43%), Positives = 44/79 (55%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LDEN LI I++ QN GK SEC++ Q L NL+YLA IAD+
Sbjct: 16 ITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPG 91
P PP+ GG+ Q G
Sbjct: 76 PAPPTQTMPMGPGGMSQSG 94
Score = 36 (17.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 86 GIMQPGAHYMQHQQSQPMTP 105
G + G+H M +Q P P
Sbjct: 236 GQVNQGSHMMGQRQMPPYRP 255
Score = 34 (17.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 88 MQPGAHYMQHQQ 99
MQP M HQQ
Sbjct: 198 MQPNQGPMMHQQ 209
>UNIPROTKB|F1NW13 [details] [associations]
symbol:SS18L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000780 "condensed nuclear chromosome,
centromeric region" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] GeneTree:ENSGT00500000044808 OMA:MTVSSHG
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 EMBL:AADN02019243
IPI:IPI00588933 Ensembl:ENSGALT00000008262 Uniprot:F1NW13
Length = 399
Score = 153 (58.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 41/109 (37%), Positives = 57/109 (52%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 20 VTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 79
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQSQ-------PMTPQSLMAARSS 114
P PP+ + GG+ Q ++ H QS + P SLM ++ S
Sbjct: 80 PAPPTQNINLGPGGMTQSASNQSLHSQSNLSDAIGTGLPPSSLMQSQIS 128
>UNIPROTKB|B4DLD3 [details] [associations]
symbol:SS18 "cDNA FLJ58120, highly similar to SSXT protein"
species:9606 "Homo sapiens" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0000902 "cell morphogenesis"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007243 "intracellular protein kinase cascade" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] GO:GO:0000226
GO:GO:0042493 GO:GO:0007243 GO:GO:0000902 GO:GO:0048013
GO:GO:0005881 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 UniGene:Hs.129261 EMBL:AC091021
HGNC:HGNC:11340 ChiTaRS:SS18 EMBL:AK296949 IPI:IPI01011245
STRING:B4DLD3 Ensembl:ENST00000542420 Uniprot:B4DLD3
Length = 395
Score = 135 (52.6 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 29 LDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ-------PQPPSVHAQ 81
LD+N LI I++SQN GK SEC++ Q L NL+YLA IAD+ P PP+ +
Sbjct: 2 LDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMP 61
Query: 82 FSSGGIMQPG 91
GG+ Q G
Sbjct: 62 MGPGGMNQSG 71
Score = 34 (17.0 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 88 MQPGAHYMQHQQ 99
MQP M HQQ
Sbjct: 175 MQPNQGPMMHQQ 186
>UNIPROTKB|Q08E31 [details] [associations]
symbol:SS18L1 "Calcium-responsive transactivator"
species:9913 "Bos taurus" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0000780 "condensed nuclear chromosome, centromeric region"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
GO:GO:0005634 GO:GO:0045893 GO:GO:0000780 GO:GO:0016358
GO:GO:0006351 GO:GO:0016568 GO:GO:0000777 EMBL:BC123448
IPI:IPI00687482 RefSeq:NP_001071563.1 UniGene:Bt.72114
Ensembl:ENSBTAT00000019202 GeneID:768207 KEGG:bta:768207 CTD:26039
eggNOG:NOG257374 GeneTree:ENSGT00500000044808 HOGENOM:HOG000048717
HOVERGEN:HBG003892 InParanoid:Q08E31 OMA:MTVSSHG NextBio:20918518
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 Uniprot:Q08E31
Length = 402
Score = 149 (57.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 41/107 (38%), Positives = 54/107 (50%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQSQ-------PMTPQSLMAAR 112
P PP+ GG+ Q G+ H Q + P SLM A+
Sbjct: 76 PAPPTQSMTLGPGGLSQSGSAQGLHSQGSLSDAIGAGLPPSSLMQAQ 122
>UNIPROTKB|O75177 [details] [associations]
symbol:SS18L1 "Calcium-responsive transactivator"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0000780 "condensed nuclear chromosome,
centromeric region" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0050773 "regulation of dendrite development" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
GO:GO:0005634 EMBL:CH471077 GO:GO:0045893 GO:GO:0000780
GO:GO:0016358 GO:GO:0006351 GO:GO:0016568 GO:GO:0000777 CTD:26039
eggNOG:NOG257374 HOVERGEN:HBG003892 OMA:MTVSSHG InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 EMBL:AB014593 EMBL:BX640848
EMBL:AY203931 EMBL:AK125656 EMBL:AK291485 EMBL:AL078633
EMBL:BC034494 EMBL:BC068993 IPI:IPI00028722 IPI:IPI00747811
IPI:IPI00954973 IPI:IPI00954989 IPI:IPI00955028 RefSeq:NP_945173.1
UniGene:Hs.154429 ProteinModelPortal:O75177 IntAct:O75177
MINT:MINT-1450756 STRING:O75177 PhosphoSite:O75177 PaxDb:O75177
PRIDE:O75177 DNASU:26039 Ensembl:ENST00000331758
Ensembl:ENST00000370848 Ensembl:ENST00000421564 GeneID:26039
KEGG:hsa:26039 UCSC:uc002ycb.3 GeneCards:GC20P060718
HGNC:HGNC:15592 HPA:CAB011827 MIM:606472 neXtProt:NX_O75177
PharmGKB:PA37989 OrthoDB:EOG4F4SBW PhylomeDB:O75177
GenomeRNAi:26039 NextBio:47867 ArrayExpress:O75177 Bgee:O75177
CleanEx:HS_SS18L1 Genevestigator:O75177 GermOnline:ENSG00000184402
Uniprot:O75177
Length = 396
Score = 148 (57.2 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 36/87 (41%), Positives = 47/87 (54%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I+E Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQ 99
P PP+ + G + Q G+ H Q
Sbjct: 76 PAPPTQNMNLGPGALTQSGSSQGLHSQ 102
>RGD|1311919 [details] [associations]
symbol:Ss18 "synovial sarcoma translocation, Chromosome 18"
species:10116 "Rattus norvegicus" [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISO] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005881 "cytoplasmic microtubule" evidence=ISO] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0007243
"intracellular protein kinase cascade" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=ISO]
[GO:0042493 "response to drug" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048013 "ephrin receptor signaling pathway"
evidence=ISO] RGD:1311919 HOGENOM:HOG000048717 HOVERGEN:HBG003892
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 UniGene:Rn.1014
EMBL:BC083824 IPI:IPI00364949 STRING:Q5XI66
Ensembl:ENSRNOT00000041836 InParanoid:Q5XI66 Genevestigator:Q5XI66
Uniprot:Q5XI66
Length = 397
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LDEN LI I++ QN GK SEC++ Q L NL+YLA IAD+
Sbjct: 26 ITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVYLATIADSNQNMQSLL 85
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQSQP 102
P PP+ + GG+ Q G S P
Sbjct: 86 PAPPTQNVPMGPGGMSQSGPPPPPRSHSMP 115
>UNIPROTKB|D4ABC5 [details] [associations]
symbol:Ss18 "Protein Ss18" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048013 "ephrin
receptor signaling pathway" evidence=IEA] RGD:1311919 GO:GO:0000226
GO:GO:0042493 GO:GO:0045944 GO:GO:0007243 GO:GO:0000902
GO:GO:0048013 GO:GO:0005881 GO:GO:0030374
GeneTree:ENSGT00500000044808 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 CTD:6760 KO:K15623 OrthoDB:EOG4RFKTH IPI:IPI00569484
RefSeq:NP_001094370.1 UniGene:Rn.1014 ProteinModelPortal:D4ABC5
Ensembl:ENSRNOT00000032454 GeneID:361295 KEGG:rno:361295
NextBio:675851 ArrayExpress:D4ABC5 Uniprot:D4ABC5
Length = 418
Score = 146 (56.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/90 (40%), Positives = 47/90 (52%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LDEN LI I++ QN GK SEC++ Q L NL+YLA IAD+
Sbjct: 16 ITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQSQP 102
P PP+ + GG+ Q G S P
Sbjct: 76 PAPPTQNVPMGPGGMSQSGPPPPPRSHSMP 105
>RGD|621847 [details] [associations]
symbol:Ss18l1 "synovial sarcoma translocation gene on chromosome
18-like 1" species:10116 "Rattus norvegicus" [GO:0000777 "condensed
chromosome kinetochore" evidence=IEA] [GO:0000780 "condensed
nuclear chromosome, centromeric region" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA;ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016604
"nuclear body" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0050773 "regulation
of dendrite development" evidence=IDA] RGD:621847 GO:GO:0045893
GO:GO:0006351 GO:GO:0016568 GO:GO:0050773 GO:GO:0016604
GO:GO:0000777 CTD:26039 eggNOG:NOG257374
GeneTree:ENSGT00500000044808 HOGENOM:HOG000048717
HOVERGEN:HBG003892 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 EMBL:AY034073 IPI:IPI00207792 RefSeq:NP_620273.1
UniGene:Rn.81037 STRING:Q91XJ0 Ensembl:ENSRNOT00000011306
GeneID:192352 KEGG:rno:192352 NextBio:623029 ArrayExpress:Q91XJ0
Genevestigator:Q91XJ0 Uniprot:Q91XJ0
Length = 401
Score = 144 (55.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/87 (40%), Positives = 47/87 (54%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQ 99
P PP+ + G + Q G+ H Q
Sbjct: 76 PAPPTQNMNLGPGALSQSGSSQGLHPQ 102
>MGI|MGI:2444061 [details] [associations]
symbol:Ss18l1 "synovial sarcoma translocation gene on
chromosome 18-like 1" species:10090 "Mus musculus" [GO:0000775
"chromosome, centromeric region" evidence=ISS] [GO:0000776
"kinetochore" evidence=IEA] [GO:0000780 "condensed nuclear
chromosome, centromeric region" evidence=IDA] [GO:0003677 "DNA
binding" evidence=ISA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016604 "nuclear body"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0050773 "regulation of dendrite
development" evidence=ISO] MGI:MGI:2444061 GO:GO:0045893
GO:GO:0000780 GO:GO:0003677 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0016568 GO:GO:0000777 CTD:26039
eggNOG:NOG257374 GeneTree:ENSGT00500000044808 HOGENOM:HOG000048717
HOVERGEN:HBG003892 OMA:MTVSSHG InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 OrthoDB:EOG4F4SBW EMBL:AK173004 EMBL:AK038669
EMBL:AK054560 EMBL:AK133944 EMBL:AL663067 EMBL:BC053087
EMBL:BC054730 IPI:IPI00387517 RefSeq:NP_848865.4 UniGene:Mm.63068
ProteinModelPortal:Q8BW22 STRING:Q8BW22 PaxDb:Q8BW22 PRIDE:Q8BW22
Ensembl:ENSMUST00000041126 GeneID:269397 KEGG:mmu:269397
UCSC:uc008oic.2 InParanoid:Q8BYQ7 NextBio:392828 Bgee:Q8BW22
Genevestigator:Q8BW22 Uniprot:Q8BW22
Length = 402
Score = 144 (55.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/87 (40%), Positives = 47/87 (54%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQ 99
P PP+ + G + Q G+ H Q
Sbjct: 76 PAPPTQNMNLGPGALSQSGSSQGLHPQ 102
>UNIPROTKB|J3KT22 [details] [associations]
symbol:SS18 "Protein SSXT" species:9606 "Homo sapiens"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030
EMBL:AC091021 HGNC:HGNC:11340 ChiTaRS:SS18 Ensembl:ENST00000579061
Uniprot:J3KT22
Length = 152
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 29 LDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ-------PQPPSVHAQ 81
LD+N LI I++SQN GK SEC++ Q L NL+YLA IAD+ P PP+ +
Sbjct: 2 LDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMP 61
Query: 82 FSSGGIMQPG 91
GG+ Q G
Sbjct: 62 MGPGGMNQSG 71
>UNIPROTKB|J3QQX5 [details] [associations]
symbol:SS18 "Protein SSXT" species:9606 "Homo sapiens"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] EMBL:AC091021 Ensembl:ENST00000584083 HGNC:HGNC:11340
ChiTaRS:SS18 InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030
Uniprot:J3QQX5
Length = 130
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 29 LDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ-------PQPPSVHAQ 81
LD+N LI I++SQN GK SEC++ Q L NL+YLA IAD+ P PP+ +
Sbjct: 2 LDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMP 61
Query: 82 FSSGGIMQPG 91
GG+ Q G
Sbjct: 62 MGPGGMNQSG 71
>UNIPROTKB|A5D7A1 [details] [associations]
symbol:SS18 "SS18 protein" species:9913 "Bos taurus"
[GO:0048013 "ephrin receptor signaling pathway" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] GO:GO:0000226 GO:GO:0042493
GO:GO:0045944 GO:GO:0007243 GO:GO:0000902 GO:GO:0048013
GO:GO:0005881 GO:GO:0030374 GeneTree:ENSGT00500000044808
HOGENOM:HOG000048717 HOVERGEN:HBG003892 InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 CTD:6760 eggNOG:NOG274014 KO:K15623
OrthoDB:EOG4RFKTH OMA:IQCIMDS EMBL:DAAA02056547 EMBL:BC140481
IPI:IPI00852562 RefSeq:NP_001091591.1 UniGene:Bt.41790
Ensembl:ENSBTAT00000015327 GeneID:540947 KEGG:bta:540947
InParanoid:A5D7A1 NextBio:20878926 Uniprot:A5D7A1
Length = 386
Score = 139 (54.0 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LDEN LI I++ QN GK SEC++ Q L NL+YLA IAD+
Sbjct: 16 ITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPG 91
P PP+ + GG+ G
Sbjct: 76 PAPPTQNMPMGPGGMSPSG 94
>UNIPROTKB|J3QLJ7 [details] [associations]
symbol:SS18 "Protein SSXT" species:9606 "Homo sapiens"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0048013 "ephrin receptor signaling pathway"
evidence=IEA] InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030
EMBL:AC091021 HGNC:HGNC:11340 ChiTaRS:SS18 Ensembl:ENST00000581021
Uniprot:J3QLJ7
Length = 70
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/68 (44%), Positives = 40/68 (58%)
Query: 29 LDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ-------PQPPSVHAQ 81
LD+N LI I++SQN GK SEC++ Q L NL+YLA IAD+ P PP+ +
Sbjct: 2 LDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLLPAPPTQNMP 61
Query: 82 FSSGGIMQ 89
GG+ Q
Sbjct: 62 MGPGGMNQ 69
>MGI|MGI:1349474 [details] [associations]
symbol:Deb1 "differentially expressed in B16F10 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1349474
GeneTree:ENSGT00500000044808 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 EMBL:AK003863 EMBL:BC027548 IPI:IPI00133291
RefSeq:NP_081070.1 UniGene:Mm.24848 STRING:Q9D174
PhosphoSite:Q9D174 PRIDE:Q9D174 Ensembl:ENSMUST00000035113
GeneID:26901 KEGG:mmu:26901 UCSC:uc009sdo.1 CTD:26901
eggNOG:NOG321067 HOGENOM:HOG000265025 HOVERGEN:HBG054385
OMA:ENDQLVR OrthoDB:EOG4G4GS2 NextBio:304753 Bgee:Q9D174
CleanEx:MM_DEB1 Genevestigator:Q9D174 GermOnline:ENSMUSG00000032526
Uniprot:Q9D174
Length = 77
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADA 71
V + IQ+ L+EN LI IVE QN G+ +EC + Q L RNL+YLA IADA
Sbjct: 16 VNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADA 67
>ZFIN|ZDB-GENE-030131-4867 [details] [associations]
symbol:ss18 "synovial sarcoma translocation,
chromosome 18 (H. sapiens)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] ZFIN:ZDB-GENE-030131-4867
GeneTree:ENSGT00500000044808 HOGENOM:HOG000048717
HOVERGEN:HBG003892 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 CTD:6760 eggNOG:NOG274014 KO:K15623 OrthoDB:EOG4RFKTH
EMBL:FP101911 EMBL:BC047188 IPI:IPI00491300 RefSeq:NP_956038.1
UniGene:Dr.20155 Ensembl:ENSDART00000011919 GeneID:326668
KEGG:dre:326668 InParanoid:Q802V1 NextBio:20809677 Uniprot:Q802V1
Length = 368
Score = 134 (52.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/100 (38%), Positives = 52/100 (52%)
Query: 19 NVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------ 72
++T IQ+ LDEN LI I++ Q+ GK +EC+ Q L RNL+YLA IAD+
Sbjct: 15 DITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVYLATIADSNQNMQSL 74
Query: 73 -PQPPSVHAQFS-SGGIMQ-PGAHYMQHQQSQPMTPQSLM 109
P PP+ + + SG Q P H M + QS M
Sbjct: 75 LPAPPTQNMPMNQSGATPQLPHGHSMPSEGPTAPHMQSQM 114
>UNIPROTKB|F1PU82 [details] [associations]
symbol:SS18L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016358 "dendrite development" evidence=IEA]
[GO:0000780 "condensed nuclear chromosome, centromeric region"
evidence=IEA] GO:GO:0000780 GO:GO:0016358
GeneTree:ENSGT00500000044808 OMA:MTVSSHG InterPro:IPR007726
PANTHER:PTHR23107 Pfam:PF05030 EMBL:AAEX03014087 EMBL:AAEX03014088
EMBL:AAEX03014089 Ensembl:ENSCAFT00000019926 Uniprot:F1PU82
Length = 402
Score = 131 (51.2 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 27 QYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ-------PQPPSVH 79
+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+ P PP+ +
Sbjct: 23 EMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQN 82
Query: 80 AQFSSGGIMQPGAHYMQHQQ 99
G + Q G+ H Q
Sbjct: 83 MNLGPGALSQSGSSQGLHSQ 102
>ZFIN|ZDB-GENE-050417-268 [details] [associations]
symbol:zgc:112097 "zgc:112097" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] ZFIN:ZDB-GENE-050417-268 GeneTree:ENSGT00500000044808
InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030 eggNOG:NOG321067
HOGENOM:HOG000265025 HOVERGEN:HBG054385 OMA:ENDQLVR
OrthoDB:EOG4G4GS2 EMBL:CU611056 EMBL:BC093199 IPI:IPI00570331
RefSeq:NP_001153293.1 UniGene:Dr.34159 Ensembl:ENSDART00000058160
GeneID:550446 KEGG:dre:550446 InParanoid:Q567E9 NextBio:20879691
Uniprot:Q567E9
Length = 82
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQPQ 74
+ + IQ+ LDEN L+ I E Q G+ +EC + Q L RN++YL IADA +
Sbjct: 16 INQETIQRLLDENDQLVRCISEYQQKGRATECVQYQQILHRNIVYLGTIADASTE 70
>DICTYBASE|DDB_G0276877 [details] [associations]
symbol:mybK "SSXT family protein" species:44689
"Dictyostelium discoideum" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0276877 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAFI02000019
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 InterPro:IPR007726 PANTHER:PTHR23107 Pfam:PF05030
eggNOG:NOG283574 RefSeq:XP_642973.1 ProteinModelPortal:Q86HX9
EnsemblProtists:DDB0220507 GeneID:8620845 KEGG:ddi:DDB_G0276877
Uniprot:Q86HX9
Length = 894
Score = 124 (48.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/92 (39%), Positives = 48/92 (52%)
Query: 17 PN--NVT-TDH-IQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ 72
PN NVT T+H + ++EN+ +I I E QN GKL+EC + Q RL NL+ LA +AD Q
Sbjct: 12 PNTTNVTNTEHSMLAKIEENRHIIQTIWEKQNLGKLTECEQFQKRLHSNLLLLAPLADHQ 71
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQSQPMT 104
Q A +Q QQ P+T
Sbjct: 72 QNYHKQQQALLQQQQQQQQA-LLQQQQQSPVT 102
>UNIPROTKB|I3L763 [details] [associations]
symbol:SS18L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016358 "dendrite development" evidence=IEA]
[GO:0000780 "condensed nuclear chromosome, centromeric region"
evidence=IEA] GO:GO:0000780 GO:GO:0016358
GeneTree:ENSGT00500000044808 InterPro:IPR007726 PANTHER:PTHR23107
Pfam:PF05030 Ensembl:ENSSSCT00000027264 OMA:THYSSAQ Uniprot:I3L763
Length = 316
Score = 101 (40.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 39 IVESQNSGKLSECAENQARLQRNLMYLA----AIADAQ---PQPPSVHAQFSSGGIMQPG 91
I++ Q+ GK +EC + Q L RNL+YLA + + A PQPP+ GG+ Q G
Sbjct: 3 ILDYQSKGKTAECTQYQQILHRNLVYLARAVPSFSSATFPLPQPPTQSMTLGPGGLSQSG 62
Query: 92 AHYMQHQQSQ-------PMTPQSLMAAR 112
+ H Q + P SLM A+
Sbjct: 63 SSQGLHAQGSLGDAIGAGLPPSSLMQAQ 90
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.126 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 220 132 0.00091 102 3 11 23 0.45 31
30 0.43 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 525 (56 KB)
Total size of DFA: 122 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.75u 0.09s 14.84t Elapsed: 00:00:02
Total cpu time: 14.76u 0.09s 14.85t Elapsed: 00:00:02
Start: Sat May 11 04:01:26 2013 End: Sat May 11 04:01:28 2013