BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027673
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L8A5|GIF1_ARATH GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1
Length = 210
Score = 194 bits (492), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/236 (59%), Positives = 154/236 (65%), Gaps = 42/236 (17%)
Query: 1 MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60
MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR
Sbjct: 1 MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60
Query: 61 NLMYLAAIADAQPQPPSVHAQFSSG----GIMQPGAHYM---QHQQSQPMTPQSLMAARS 113
NLMYLAAIAD+QPQPPSVH+Q+ S + G+HY+ Q Q Q MT QSLMAARS
Sbjct: 61 NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120
Query: 114 SMVYSQQQ-----FSVLQQQQALHGQL----GMSSGGSSGLHMLQSEGSTAGGSGSLGGG 164
SM+Y+QQQ ++ LQ QQ H QL GGSSGLH+LQ E G
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGE-----------AG 169
Query: 165 GFPDFGRGSSGEGLHSRGMGSKHDIGSSGSAEGRGGSSGSQDGGETLYLKGADDGN 220
GF DFGRG G G S DGGETLYLK +DDGN
Sbjct: 170 GFHDFGRGKP---------------EMGSGGGGEGRGGSSGDGGETLYLKSSDDGN 210
>sp|Q93VH6|GIF3_ARATH GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1
Length = 223
Score = 110 bits (275), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 81/127 (63%), Gaps = 22/127 (17%)
Query: 7 QMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMY 64
QM PM+ +P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+NLMY
Sbjct: 6 QMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQKNLMY 65
Query: 65 LAAIADAQPQPPSVHAQFSSGGIMQPGAHYMQHQQSQPMTPQSLMAARSSMVYSQQQFSV 124
LAAIADAQPQPP+ A +SG MTPQ++ SSM F
Sbjct: 66 LAAIADAQPQPPA--ATLTSGA----------------MTPQAMAPNPSSMQPPPSYF-- 105
Query: 125 LQQQQAL 131
+QQ QA+
Sbjct: 106 MQQHQAV 112
>sp|Q9MAL9|GIF2_ARATH GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1
Length = 195
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 82/126 (65%), Gaps = 13/126 (10%)
Query: 2 QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60
QQ QM PM+ + P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+
Sbjct: 3 QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62
Query: 61 NLMYLAAIADAQ--------PQPPSVHAQFSSGGI-MQPGAHYMQHQQSQPMTPQSLMAA 111
NLMYLAAIADAQ +V AQ ++ MQP +++MQH Q+ +P + A
Sbjct: 63 NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQA---SPAGIFAP 119
Query: 112 RSSMVY 117
R + +
Sbjct: 120 RGPLQF 125
>sp|O75177|CREST_HUMAN Calcium-responsive transactivator OS=Homo sapiens GN=SS18L1 PE=1
SV=2
Length = 396
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I+E Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGA 92
P PP+ + G + Q G+
Sbjct: 76 PAPPTQNMNLGPGALTQSGS 95
>sp|Q5RFQ1|SSXT_PONAB Protein SSXT OS=Pongo abelii GN=SS18 PE=2 SV=2
Length = 418
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LD+N LI I++SQN GK SEC++ Q L NL+YLA IAD+
Sbjct: 16 ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGA 92
P PP+ + GG+ Q G
Sbjct: 76 PAPPTQNMPMGPGGMNQSGP 95
>sp|Q15532|SSXT_HUMAN Protein SSXT OS=Homo sapiens GN=SS18 PE=1 SV=3
Length = 418
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LD+N LI I++SQN GK SEC++ Q L NL+YLA IAD+
Sbjct: 16 ITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGA 92
P PP+ + GG+ Q G
Sbjct: 76 PAPPTQNMPMGPGGMNQSGP 95
>sp|Q6DDK1|CREST_XENLA Calcium-responsive transactivator OS=Xenopus laevis GN=ss18l1 PE=2
SV=1
Length = 403
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGAHYMQHQQ 99
P PP+ + GG+ Q G H Q
Sbjct: 76 PAPPTQNMNLGPGGMSQTGPSQTLHSQ 102
>sp|Q08E31|CREST_BOVIN Calcium-responsive transactivator OS=Bos taurus GN=SS18L1 PE=2
SV=1
Length = 402
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGA 92
P PP+ GG+ Q G+
Sbjct: 76 PAPPTQSMTLGPGGLSQSGS 95
>sp|Q8BW22|CREST_MOUSE Calcium-responsive transactivator OS=Mus musculus GN=Ss18l1 PE=1
SV=1
Length = 402
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGA 92
P PP+ + G + Q G+
Sbjct: 76 PAPPTQNMNLGPGALSQSGS 95
>sp|Q91XJ0|CREST_RAT Calcium-responsive transcription coactivator OS=Rattus norvegicus
GN=Ss18l1 PE=1 SV=1
Length = 401
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
VT IQ+ LDEN LI I++ Q+ GK +EC + Q L RNL+YLA IAD+
Sbjct: 16 VTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGA 92
P PP+ + G + Q G+
Sbjct: 76 PAPPTQNMNLGPGALSQSGS 95
>sp|Q62280|SSXT_MOUSE Protein SSXT OS=Mus musculus GN=Ss18 PE=2 SV=2
Length = 418
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADAQ------- 72
+T IQ+ LDEN LI I++ QN GK SEC++ Q L NL+YLA IAD+
Sbjct: 16 ITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVYLATIADSNQNMQSLL 75
Query: 73 PQPPSVHAQFSSGGIMQPGA 92
P PP+ GG+ Q G
Sbjct: 76 PAPPTQTMPMGPGGMSQSGP 95
>sp|Q9UHA2|S18L2_HUMAN SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=2 SV=1
Length = 77
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 11 MMAAYYPN------NVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMY 64
M A+ P+ V + IQ+ L+EN LI IVE QN G+ +EC + Q L RNL+Y
Sbjct: 1 MSVAFVPDWLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIY 60
Query: 65 LAAIADAQPQPPS 77
LA IADA P S
Sbjct: 61 LATIADASPTSTS 73
>sp|Q9D174|S18L2_MOUSE SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=2 SV=1
Length = 77
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 20 VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADA 71
V + IQ+ L+EN LI IVE QN G+ +EC + Q L RNL+YLA IADA
Sbjct: 16 VNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADA 67
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 6 MQMQPMMAAYYPN--NVT-TDH-IQQYLDENKSLILKIVESQNSGKLSECAENQARLQRN 61
MQ + PN NVT T+H + ++EN+ +I I E QN GKL+EC + Q RL N
Sbjct: 1 MQSDTLTVQTVPNTTNVTNTEHSMLAKIEENRHIIQTIWEKQNLGKLTECEQFQKRLHSN 60
Query: 62 LMYLAAIADAQ 72
L+ LA +AD Q
Sbjct: 61 LLLLAPLADHQ 71
>sp|P20930|FILA_HUMAN Filaggrin OS=Homo sapiens GN=FLG PE=1 SV=3
Length = 4061
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 97 HQQSQPMTPQSLMAARS----SMVYSQQQFSVLQQQQALHGQLGMSSGGSSGLHMLQSEG 152
HQQS + + A RS S +Y Q S +Q ++ HG+ G S+GG G H Q+
Sbjct: 2392 HQQSHQESTRGRSAGRSGRSGSFLY---QVSTHEQSESAHGRTGTSTGGRQGSHHKQARD 2448
Query: 153 ST 154
S+
Sbjct: 2449 SS 2450
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,089,175
Number of Sequences: 539616
Number of extensions: 3875544
Number of successful extensions: 37389
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 871
Number of HSP's that attempted gapping in prelim test: 17673
Number of HSP's gapped (non-prelim): 10071
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)