BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027681
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XBA5|DI196_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza sativa subsp.
japonica GN=DI19-6 PE=2 SV=1
Length = 208
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 81/129 (62%), Gaps = 2/129 (1%)
Query: 24 LNTDNHSIVDETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83
+ T N + E DD+ PCPFCY+E+E H +C HLQEEHCF+MKNAVCP+CA NL
Sbjct: 16 IPTINFQMYSEIAGDDEWWEYIPCPFCYIEVEVHFLCDHLQEEHCFDMKNAVCPICADNL 75
Query: 84 GKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSAMLGK-ELSSFLGSPTIVRGN-APESLP 141
KD EHF VQH+ LKRR+ S + +A G E S+ +P+ G AP+S P
Sbjct: 76 DKDTDEHFRVQHSHLLKRRKSSSFSCKPSSAAADKGSYEEDSYFEAPSHCMGRPAPDSSP 135
Query: 142 DPLLSPFLC 150
DPLLS F+C
Sbjct: 136 DPLLSQFIC 144
>sp|Q5JME8|DI195_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp.
japonica GN=DI19-5 PE=2 SV=1
Length = 202
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 45 FPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRK 104
FPCPFCY+E+E IC+HLQEEHCF+ +NAVCPLCA N+G+D HF VQH+ LKRR+
Sbjct: 37 FPCPFCYIEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHSHLLKRRKP 96
Query: 105 CLKSGLRNGGSAMLGKELSSFLGSPTIVRGNAP--ESLPDPLLSPFLCSGTLSDTKG 159
S S F G P + N + PDPLLS F+CS +DT
Sbjct: 97 SRPSSSWPTPS---NNSDPYFEGPPQYMMNNRTYQDPAPDPLLSQFICSMAQTDTNS 150
>sp|Q688X9|DI191_ORYSJ Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica
GN=DI19-1 PE=2 SV=1
Length = 226
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 1 MDIDFWASRVHSAKHFSAVRASRLNTDNHSIVDETEIDDDVKACFPCPFCYLEIEAHMIC 60
MD + W SR+ +AK F A ++L + + ++E ++D++V+ F CP+CY + + +C
Sbjct: 1 MDSEHWISRLAAAKRFYA---AQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLC 57
Query: 61 SHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSA--ML 118
+HL+EEH FE A CP+C+ + KD H VQH K RR+ L+ + G A +L
Sbjct: 58 AHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFKNRRR-LRRFVIPGSQALSLL 116
Query: 119 GKELSS-----FLGSPTIVRGNAPESL---PDPLLSPFLCSGTLSDTKGIQK 162
++L LG N+ + DPLLS F S SDT+ K
Sbjct: 117 SRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSK 168
>sp|Q39083|DI191_ARATH Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1
PE=1 SV=2
Length = 206
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query: 33 DETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFM 92
+E + DDD + F CPFC + +C H+ +EH E KNAVCP+C+ +G D H
Sbjct: 23 EEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHIT 82
Query: 93 VQHAS--SLKRRRKCLKSGLRNGGSAMLGKE-----LSSFLGSPTIVRGNAPESLPDPLL 145
+ H S L+R+RK KSG N ++L KE L LG + A PDPLL
Sbjct: 83 LHHGSLFKLQRKRKSRKSGT-NSTLSLLRKELREGDLQRLLGFTSRNGSVASSVTPDPLL 141
Query: 146 SPFL 149
S F+
Sbjct: 142 SSFI 145
>sp|Q6NM26|DI196_ARATH Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana
GN=DI19-6 PE=1 SV=1
Length = 222
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 1 MDIDFWASRVHSA-KHFSAVRASRLNTDNHSIVDETEIDDDVKACFPCPFCYLEIEAHMI 59
MD D W+ R+ SA + + SR +DN +E E +DD + + CPFC + +
Sbjct: 1 MDSDSWSDRLASASRRYQLDFLSR--SDNFLGFEEIEGEDDFREEYACPFCSDYFDIVSL 58
Query: 60 CSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSAML- 118
C H+ E+H + KN VCP+CA + D H +QHA+ K RK + R G +ML
Sbjct: 59 CCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRK--RKSRRGGAQSMLS 116
Query: 119 --------GKELSSFLGSPTIVRGNAPESLPDPLLSPFL 149
G S F G+ V ++ DPLLS F+
Sbjct: 117 ILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFI 155
>sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp.
japonica GN=DI19-2 PE=2 SV=2
Length = 233
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 74/156 (47%), Gaps = 25/156 (16%)
Query: 32 VDETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHF 91
V+E E +A + CPFC + + C H+ +EH E K+ VCP+CA +G D H
Sbjct: 42 VEEVEARGGGEA-YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHL 100
Query: 92 MVQHASSLK--RRRKCLK-------------SGLRNGGSAMLGKELSSFLGSPTIVRGNA 136
+QH S K RRR+ K LR+G L SFLG + V N
Sbjct: 101 TMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDG-------SLQSFLGGSSYV-SNP 152
Query: 137 PESLPDPLLSPFLCSGTLSD-TKGIQKDDCTNKFSL 171
P + PDP LS +CS +++ +K + D N F L
Sbjct: 153 PAAAPDPFLSSLICSLPVAEPSKDLHSDSSDNNFLL 188
>sp|Q9FJ17|DI197_ARATH Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana
GN=DI19-7 PE=1 SV=2
Length = 211
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 34 ETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMV 93
+ E +DD+KA F CPFC E + +C H+ H E KN VCP+C +G D H
Sbjct: 32 DVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITT 91
Query: 94 QHASSLK-RRRKCLKSGLRNGGSAMLGKE-----LSSFLGSPTIVRGNAPESLPDPLLSP 147
QH + K +RR+ L+ G + L KE L S GS T + + +S DPLLS
Sbjct: 92 QHGNVFKVQRRRRLRKGGYSSTYLTLKKELREANLQSLGGSSTFIPSSNIDS--DPLLSS 149
Query: 148 FL 149
F+
Sbjct: 150 FM 151
>sp|Q6H6E6|DI194_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp.
japonica GN=DI19-4 PE=2 SV=1
Length = 245
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 17/112 (15%)
Query: 1 MDIDFWASRVHSAKHFSAVRASR----------------LNTDNHSIVDETEIDDDVKAC 44
MD D W SR+ +AK A++ ++ + D + D+ E +D+V+
Sbjct: 1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGY-DDVEPEDEVRPD 59
Query: 45 FPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHA 96
FPCP+CY + + +C+HL++EH FE K CP+C+A + KD +H +QH+
Sbjct: 60 FPCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHS 111
>sp|Q84J70|DI193_ARATH Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana
GN=DI19-3 PE=1 SV=1
Length = 223
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 17/161 (10%)
Query: 1 MDIDFWASRVHSA-KHFSAVRASRLNTDNHSIVDETEIDDDVKACFPCPFCYLEIEAHMI 59
MD D W+ R+ SA + + SR +D +E + +++ + F CPFC + +
Sbjct: 1 MDSDSWSDRLASATRRYQLAFPSR--SDTFLGFEEIDGEEEFREEFACPFCSDYFDIVSL 58
Query: 60 CSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGS---- 115
C H+ E+H E KN VCP+CA +G D H +QHA+ K R K R GGS
Sbjct: 59 CCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHR---KRKPRRGGSYSTL 115
Query: 116 AMLGKEL------SSFLGSPTIVRGNAPESL-PDPLLSPFL 149
++L +E S F GS IV ++ ++ DPLLS F+
Sbjct: 116 SILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFI 156
>sp|Q8VXU6|DI194_ARATH Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana
GN=DI19-4 PE=1 SV=1
Length = 224
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 33 DETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFM 92
++ E +DD+KA F CPFC + + +C H+ EEH E KN VCP+C +G D H
Sbjct: 35 EDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHIT 94
Query: 93 VQHASSLK 100
QHA+ K
Sbjct: 95 TQHANFFK 102
>sp|O04259|DI195_ARATH Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana
GN=DI19-5 PE=1 SV=2
Length = 214
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 34 ETEIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMV 93
E E DD++ +PCPFC + + +C H+ EEH + N +CP+C+ + +H
Sbjct: 32 EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITT 91
Query: 94 QHASSLKRRRKCLKSGLRNGGSAMLGKELSSFLGSPTIVRGNAPESLPDPLLSPFLCSGT 153
QH KR K + G+ K L S + P + + +S+ DPLLS +
Sbjct: 92 QHRDVFKRLYKDESYSAFSPGTR---KYLQSLIDEP-LSTNHTSKSVLDPLLSFIYNPPS 147
Query: 154 LSDTKGIQKD 163
+K +Q D
Sbjct: 148 PKKSKLVQPD 157
>sp|Q8GWK1|DI192_ARATH Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana
GN=DI19-2 PE=1 SV=1
Length = 221
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 36 EIDDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQH 95
E+DDD+ +PCPFC + + +C H+ EEH E N +CP+C+ + +H H
Sbjct: 38 EVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHH 97
Query: 96 ASSLKRRRK 104
LK +K
Sbjct: 98 RDVLKSEQK 106
>sp|Q5QMP3|DI193_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp.
japonica GN=DI19-3 PE=2 SV=1
Length = 246
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 1 MDIDFWASRVHSAKHFSAVRASRLN--------------TDNHSIVDETEIDDDVKACFP 46
MD + W S + +AK F A + ++ D+ ++ +A +P
Sbjct: 1 MDSEHWISSLAAAKRFYAAQLGHVDDMAGIGMEEVEMEMEDDGEGMELELEMQLEEATWP 60
Query: 47 ---CPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRR 103
CP+CY + + +C+HL+E+H +E + CP+C + +D H +QH K R
Sbjct: 61 DVACPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFKSGR 120
Query: 104 KCLKSGLRNGGSAML------GKELSSFLGSPTIVR---GNAPESLPDPLLSPF 148
+ + + + L +L + LG R A DPLLS F
Sbjct: 121 RMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSF 174
>sp|Q9ZPE4|FBW2_ARATH F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1
Length = 317
Score = 38.9 bits (89), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 48 PFCYLEIEAHMICSHL-QEEHCFEMKNAVCPLCAANLGK--------DAAEHFMVQHASS 98
P+C+ EI+ + + Q +H M + P A +L K D+ F+ QHA S
Sbjct: 48 PYCWQEIDIELWSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGS 107
Query: 99 LKRRRKCLKSGLRNGGSAMLGKELSSF 125
LK K +SGL N G + ++LSS
Sbjct: 108 LK-TLKVPRSGLTNSGVVNVAEKLSSL 133
>sp|Q03Y25|GLYA_LEUMM Serine hydroxymethyltransferase OS=Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 / NCDO 523) GN=glyA PE=3
SV=1
Length = 410
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 115 SAMLGKELSSFLGSPTIVRGNAPESLPDPLLSPFLCSG-----TLSDTKGIQKDDCTN 167
+A+ GK+ L + +I E+LP+ LSPF+ SG T+G +DD TN
Sbjct: 320 TALNGKQTQELLDTVSITTNK--EALPNEQLSPFVTSGIRIGTAAITTRGFDEDDATN 375
>sp|Q9C0A1|ZFHX2_HUMAN Zinc finger homeobox protein 2 OS=Homo sapiens GN=ZFHX2 PE=2 SV=3
Length = 2572
Score = 34.3 bits (77), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 28/135 (20%)
Query: 47 CPFC-YLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKC 105
CP+C +L E+ + +H +H + K CPLC L A HF + H ++ +C
Sbjct: 982 CPYCSFLSPESSQVRAHTLSQHAVQPKYR-CPLCQEQLVGRPALHFHLSHLHNVV--PEC 1038
Query: 106 LKSGLRNGGSAML-----------------GKELSSFLGSPTIVRGNA-------PESLP 141
++ L + + G+E + PT R A PE+ P
Sbjct: 1039 VEKLLLVATTVEMTFTTKVLSAPTLSPLDNGQEPPTHGPEPTPSRDQAAEGPNLTPEASP 1098
Query: 142 DPLLSPFLCSGTLSD 156
DPL P L S + D
Sbjct: 1099 DPLPEPPLASVEVPD 1113
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
Query: 31 IVDETEIDDDVKACFPCPFCYLEIEAH-----MICSHLQEEHC---FEMKNAVCPLCAAN 82
I+ + D VK CP C LE E M C HL C + K CPLC
Sbjct: 67 IISPEQADKGVK----CPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLE 122
Query: 83 LGKDAAEHFMVQHASSLKRRRK 104
L D A++ + +R+R+
Sbjct: 123 LPTDNADYEEFKKDKERRRQRE 144
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2 SV=1
Length = 383
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 22/89 (24%)
Query: 45 FPCPFC----YLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDA-------AEHFMV 93
F CP+C Y E + H+ EH +CP+CAA G D A H +
Sbjct: 78 FTCPYCGKMGYTETS---LQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTL 134
Query: 94 QH--------ASSLKRRRKCLKSGLRNGG 114
+H +S ++ R+ G GG
Sbjct: 135 EHRAPRDLDESSGVRHVRRMFHPGRGLGG 163
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 22/89 (24%)
Query: 45 FPCPFC----YLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDA-------AEHFMV 93
F CP+C Y E + H+ EH +CP+CAA G D A H +
Sbjct: 78 FTCPYCGKMGYTETS---LQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTL 134
Query: 94 QH--------ASSLKRRRKCLKSGLRNGG 114
+H +S ++ R+ G GG
Sbjct: 135 EHRAPRDLDESSGVRHVRRMFHPGRGLGG 163
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 22/89 (24%)
Query: 45 FPCPFC----YLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDA-------AEHFMV 93
F CP+C Y E + H+ EH +CP+CAA G D A H +
Sbjct: 78 FTCPYCGKMGYTETS---LQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTL 134
Query: 94 QH--------ASSLKRRRKCLKSGLRNGG 114
+H +S ++ R+ G GG
Sbjct: 135 EHRAPRDLDESSGVRHVRRMFHPGRGLGG 163
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 22/89 (24%)
Query: 45 FPCPFC----YLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDA-------AEHFMV 93
F CP+C Y E + H+ EH +CP+CAA G D A H +
Sbjct: 78 FTCPYCGKMGYTETS---LQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTL 134
Query: 94 QH--------ASSLKRRRKCLKSGLRNGG 114
+H +S ++ R+ G GG
Sbjct: 135 EHRAPRDLDESSGVRHVRRMFHPGRGLGG 163
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 22/89 (24%)
Query: 45 FPCPFC----YLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDA-------AEHFMV 93
F CP+C Y E + H+ EH +CP+CAA G D A H +
Sbjct: 78 FTCPYCGKMGYTETS---LQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTL 134
Query: 94 QH--------ASSLKRRRKCLKSGLRNGG 114
+H +S ++ R+ G GG
Sbjct: 135 EHRAPRDLDESSGVRHVRRMFHPGRGLGG 163
>sp|P35519|NEU1_ANSAN Neurophysin 1 OS=Anser anser anser PE=1 SV=1
Length = 93
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 103 RKCLKSGLRNGGSAM-----LGKELSSFLGSPTIVRGNAPESLPDPLLS 146
RKCL G RN G G+EL +LG+P +R LP P S
Sbjct: 8 RKCLPCGPRNRGRCFGPRICCGEELGCYLGTPETLRCQEESFLPTPCES 56
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 41 VKACFPCPFCYLEIEA-----HMICSHLQEEHC---FEMKNAVCPLCAANLGKDAAEHFM 92
KA CP C LE EA M C HL +C + K CPLC L D +
Sbjct: 82 AKADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDSY-- 139
Query: 93 VQHASSLKRRRKCLKSGLRNGGSAM 117
+ K RR+ + L N AM
Sbjct: 140 -EEHKKDKARRQQQQHRLENLHGAM 163
>sp|Q03EK4|GLYA_PEDPA Serine hydroxymethyltransferase OS=Pediococcus pentosaceus (strain
ATCC 25745 / 183-1w) GN=glyA PE=3 SV=1
Length = 410
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 114 GSAMLGKELSSFLGSPTIVRGNAPESLPDPLLSPFLCSGT-----LSDTKGIQKDDC 165
G+ + GKE+ + L I E++P+ LSPF SG T+G ++DDC
Sbjct: 319 GTQLNGKEVQNLLDGVFITTNK--EAIPEEKLSPFKTSGIRIGTPAITTRGFKEDDC 373
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 47 CPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHF 91
CP C++ IE + C+H+Q CF K+ C +C + +E++
Sbjct: 311 CPKCHICIEKNGGCNHMQ---CFNCKHDFCWMCLGDWKTHGSEYY 352
>sp|O00308|WWP2_HUMAN NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2
PE=1 SV=2
Length = 870
Score = 31.6 bits (70), Expect = 4.3, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 20/124 (16%)
Query: 61 SHLQEE--HCFEMKNAVCPLCAANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSAML 118
SHL + C ++N + + NL + + + ++ + L N GS +
Sbjct: 79 SHLDLKVWSCHTLRNELLGTASVNL-----SNVLKNNGGKMENMQLTLNLQTENKGSVVS 133
Query: 119 GKELSSFLGSPTIVRGNAPESLPDPLLSPFLCSGTLSDTKGIQKDDCTNKFSLASDLKRY 178
G EL+ FL PT+ GN P L+D + D + ++A + +
Sbjct: 134 GGELTIFLDGPTVDLGNVPN------------GSALTDGSQLPSRDSSGT-AVAPENRHQ 180
Query: 179 PPSS 182
PPS+
Sbjct: 181 PPST 184
>sp|Q09826|SDS23_SCHPO Protein sds23/moc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=sds23 PE=1 SV=1
Length = 408
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 81 ANLGKDAAEHFMVQHASSLKRRRKCLKSGLRNGGSAMLGKELSSFLGSPTIVR--GNAPE 138
A LGK+ + + H +SL R + L SG+R ELS +I+R N
Sbjct: 136 AKLGKNKDDFITIPHTTSLGRLAEILSSGIRRVAVTNEQGELSFMASQRSIIRFLWNNIR 195
Query: 139 SLPD--PLLS 146
+ PD PL+S
Sbjct: 196 AFPDLEPLMS 205
>sp|Q9JIT1|RNF32_MOUSE RING finger protein 32 OS=Mus musculus GN=Rnf32 PE=2 SV=1
Length = 368
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 46 PCPFCYLEIEAH----MICSHLQEEHCFE-----MKNAVCPLCAANLGK-----DAAEHF 91
PCP C E E H + CSH+ C + CPLC N + D A F
Sbjct: 128 PCPICKEEFELHPQVLLSCSHVFHRACLQAFEKFTNKKTCPLCRKNQYQTRVIHDGARLF 187
Query: 92 MVQHASSLK 100
V+ A+ ++
Sbjct: 188 RVKCATRIQ 196
>sp|O46503|ST1C2_RABIT Sulfotransferase 1C2 OS=Oryctolagus cuniculus GN=SULT1C2 PE=1 SV=1
Length = 296
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 128 SPTIVRGNAPESLPDPLLSPFLCSGTLSDTK 158
+P I R P+S+ D +SPF+ GT+ D K
Sbjct: 236 NPMINRSTVPKSIMDQSISPFMRKGTVGDWK 266
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,110,298
Number of Sequences: 539616
Number of extensions: 3231624
Number of successful extensions: 6983
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 6935
Number of HSP's gapped (non-prelim): 77
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)