Query 027681
Match_columns 220
No_of_seqs 127 out of 146
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 23:14:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027681.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027681hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ct1_A Transcriptional repress 96.9 0.00064 2.2E-08 46.1 3.6 54 44-97 15-71 (77)
2 2drp_A Protein (tramtrack DNA- 96.9 0.0008 2.7E-08 44.1 3.5 54 43-96 9-65 (66)
3 3uk3_C Zinc finger protein 217 96.0 0.0053 1.8E-07 38.8 3.1 51 44-96 4-57 (57)
4 2yt9_A Zinc finger-containing 95.8 0.0083 2.8E-07 41.5 3.9 47 45-91 36-85 (95)
5 2eod_A TNF receptor-associated 95.7 0.0075 2.6E-07 39.9 3.0 48 43-93 9-59 (66)
6 1x5w_A Zinc finger protein 64, 95.5 0.012 4E-07 39.1 3.6 52 44-97 9-63 (70)
7 1x6h_A Transcriptional repress 95.5 0.012 4.2E-07 39.7 3.6 53 44-96 15-72 (86)
8 2ctd_A Zinc finger protein 512 95.2 0.017 5.7E-07 42.0 3.7 49 44-95 34-86 (96)
9 2gqj_A Zinc finger protein KIA 95.2 0.004 1.4E-07 44.6 0.4 53 44-97 24-80 (98)
10 2kmk_A Zinc finger protein GFI 95.1 0.013 4.6E-07 39.0 2.8 50 44-95 29-81 (82)
11 2cot_A Zinc finger protein 435 95.1 0.021 7.1E-07 38.5 3.8 52 43-96 17-71 (77)
12 1x6e_A Zinc finger protein 24; 95.0 0.02 6.9E-07 38.2 3.4 51 44-96 14-67 (72)
13 1bbo_A Human enhancer-binding 94.9 0.025 8.5E-07 35.6 3.5 50 45-96 2-54 (57)
14 2ee8_A Protein ODD-skipped-rel 94.9 0.032 1.1E-06 39.3 4.4 52 43-96 16-70 (106)
15 2lce_A B-cell lymphoma 6 prote 94.9 0.031 1E-06 37.3 4.1 53 42-96 15-70 (74)
16 2dmd_A Zinc finger protein 64, 94.9 0.027 9.2E-07 38.9 3.9 51 44-96 8-61 (96)
17 2adr_A ADR1; transcription reg 94.5 0.037 1.3E-06 35.2 3.7 51 44-96 2-55 (60)
18 2yt9_A Zinc finger-containing 94.5 0.027 9.1E-07 38.8 3.1 51 44-96 7-60 (95)
19 2wbt_A B-129; zinc finger; 2.7 94.3 0.038 1.3E-06 40.5 3.7 50 44-97 74-126 (129)
20 2rpc_A Zinc finger protein ZIC 94.2 0.049 1.7E-06 40.9 4.4 57 40-96 21-87 (155)
21 2dmd_A Zinc finger protein 64, 94.2 0.034 1.2E-06 38.4 3.2 51 44-96 36-89 (96)
22 2d9k_A FLN29 gene product; zin 94.2 0.014 4.8E-07 40.8 1.1 48 43-93 16-64 (75)
23 2ee8_A Protein ODD-skipped-rel 94.1 0.051 1.7E-06 38.2 3.9 52 43-96 44-98 (106)
24 2dlq_A GLI-kruppel family memb 93.9 0.055 1.9E-06 38.6 4.0 53 44-96 35-91 (124)
25 1llm_C Chimera of ZIF23-GCN4; 93.8 0.038 1.3E-06 38.1 2.8 54 44-99 3-59 (88)
26 2d9h_A Zinc finger protein 692 93.6 0.031 1.1E-06 37.6 2.1 53 44-97 7-64 (78)
27 2ej4_A Zinc finger protein ZIC 93.6 0.087 3E-06 36.3 4.4 55 42-96 23-87 (95)
28 1a1h_A QGSR zinc finger peptid 93.6 0.049 1.7E-06 37.0 3.1 50 44-95 34-86 (90)
29 2dlq_A GLI-kruppel family memb 93.5 0.055 1.9E-06 38.6 3.3 52 43-96 65-119 (124)
30 2kmk_A Zinc finger protein GFI 93.2 0.054 1.9E-06 36.0 2.7 50 45-96 2-54 (82)
31 2csh_A Zinc finger protein 297 93.0 0.11 3.8E-06 36.8 4.3 52 44-97 37-91 (110)
32 1ubd_C Protein (YY1 zinc finge 92.9 0.09 3.1E-06 37.8 3.7 49 44-95 5-58 (124)
33 2gli_A Protein (five-finger GL 92.6 0.057 1.9E-06 40.3 2.3 51 44-96 67-124 (155)
34 2lv2_A Insulinoma-associated p 92.6 0.1 3.4E-06 37.8 3.5 52 43-96 27-81 (85)
35 2eps_A POZ-, at HOOK-, and zin 92.5 0.089 3E-06 33.4 2.9 39 44-83 12-51 (54)
36 1wjp_A Zinc finger protein 295 91.9 0.085 2.9E-06 37.5 2.5 45 44-92 16-63 (107)
37 2ytn_A Zinc finger protein 347 91.9 0.12 4.2E-06 31.2 2.8 34 44-79 12-46 (46)
38 1wjp_A Zinc finger protein 295 91.3 0.14 4.7E-06 36.4 3.0 50 44-96 42-94 (107)
39 2epx_A Zinc finger protein 28 91.2 0.17 5.9E-06 30.4 3.0 35 44-79 12-47 (47)
40 2dmi_A Teashirt homolog 3; zin 91.2 0.11 3.7E-06 37.1 2.4 52 44-95 19-76 (115)
41 1llm_C Chimera of ZIF23-GCN4; 90.8 0.027 9.3E-07 38.8 -1.1 51 44-97 31-84 (88)
42 2eq0_A Zinc finger protein 347 90.6 0.16 5.3E-06 30.7 2.4 34 44-79 12-46 (46)
43 2epr_A POZ-, at HOOK-, and zin 90.5 0.18 6.2E-06 31.0 2.6 37 43-81 11-48 (48)
44 4gzn_C ZFP-57, zinc finger pro 90.4 0.18 6.1E-06 34.2 2.7 48 44-93 4-54 (60)
45 2em0_A Zinc finger protein 224 90.2 0.26 9E-06 29.6 3.2 34 44-79 12-46 (46)
46 2ema_A Zinc finger protein 347 90.2 0.16 5.6E-06 30.6 2.2 34 44-79 12-46 (46)
47 2ebt_A Krueppel-like factor 5; 90.1 0.29 1E-05 33.6 3.7 55 40-96 11-72 (100)
48 2ytk_A Zinc finger protein 347 89.8 0.15 5.1E-06 30.8 1.8 34 44-79 12-46 (46)
49 2el4_A Zinc finger protein 268 89.7 0.23 7.7E-06 29.8 2.6 34 44-79 12-46 (46)
50 2eop_A Zinc finger protein 268 89.7 0.28 9.6E-06 29.4 3.0 34 44-79 12-46 (46)
51 2eoq_A Zinc finger protein 224 89.6 0.2 6.7E-06 30.2 2.2 34 44-79 12-46 (46)
52 2dlk_A Novel protein; ZF-C2H2 89.5 0.29 1E-05 32.4 3.2 52 44-96 7-65 (79)
53 2ysl_A Tripartite motif-contai 89.4 0.15 5E-06 34.5 1.7 48 39-86 15-70 (73)
54 2emf_A Zinc finger protein 484 89.2 0.26 8.9E-06 29.7 2.6 34 44-79 12-46 (46)
55 2ghf_A ZHX1, zinc fingers and 89.1 0.25 8.5E-06 36.9 2.9 47 44-90 18-69 (102)
56 2eov_A Zinc finger protein 484 89.1 0.26 8.9E-06 29.5 2.5 34 44-79 12-46 (46)
57 2ene_A Zinc finger protein 347 89.0 0.29 9.9E-06 29.4 2.7 34 44-79 12-46 (46)
58 2eoe_A Zinc finger protein 347 89.0 0.26 8.9E-06 29.5 2.5 34 44-79 12-46 (46)
59 2ep2_A Zinc finger protein 484 88.9 0.3 1E-05 29.4 2.7 34 44-79 12-46 (46)
60 2j7j_A Transcription factor II 88.9 0.27 9.3E-06 32.6 2.7 50 45-96 2-58 (85)
61 2epq_A POZ-, at HOOK-, and zin 88.7 0.19 6.4E-06 30.3 1.7 35 44-80 10-45 (45)
62 2lt7_A Transcriptional regulat 88.7 0.23 7.8E-06 38.1 2.6 49 43-93 21-72 (133)
63 2ytj_A Zinc finger protein 484 88.6 0.31 1E-05 29.3 2.6 34 44-79 12-46 (46)
64 2emy_A Zinc finger protein 268 88.4 0.27 9.4E-06 29.5 2.3 34 44-79 12-46 (46)
65 2epz_A Zinc finger protein 28 88.3 0.34 1.2E-05 29.1 2.7 34 44-79 12-46 (46)
66 2emh_A Zinc finger protein 484 88.3 0.17 5.9E-06 30.5 1.3 34 44-79 12-46 (46)
67 2i13_A AART; DNA binding, zinc 88.3 0.24 8.4E-06 38.4 2.5 51 44-96 105-158 (190)
68 2emk_A Zinc finger protein 28 88.3 0.24 8.2E-06 29.9 2.0 34 44-79 12-46 (46)
69 1wge_A Hypothetical protein 26 88.2 0.21 7.2E-06 37.4 2.0 45 30-83 15-62 (83)
70 1a1h_A QGSR zinc finger peptid 88.2 0.31 1.1E-05 32.9 2.7 51 44-96 4-59 (90)
71 2ytg_A ZFP-95, zinc finger pro 88.2 0.28 9.5E-06 29.5 2.2 34 44-79 12-46 (46)
72 2em9_A Zinc finger protein 224 88.1 0.4 1.4E-05 28.7 2.9 34 44-79 12-46 (46)
73 2wbs_A Krueppel-like factor 4; 88.1 0.36 1.2E-05 32.4 3.0 21 44-64 5-28 (89)
74 2ytq_A Zinc finger protein 268 87.9 0.42 1.4E-05 28.8 2.9 34 44-79 12-46 (46)
75 2wbs_A Krueppel-like factor 4; 87.9 0.49 1.7E-05 31.8 3.5 48 43-92 34-86 (89)
76 2em5_A ZFP-95, zinc finger pro 87.8 0.39 1.3E-05 28.9 2.7 34 44-79 12-46 (46)
77 1f2i_G Fusion of N-terminal 17 87.8 0.31 1.1E-05 32.0 2.4 47 44-92 19-70 (73)
78 2ytr_A Zinc finger protein 347 87.7 0.35 1.2E-05 29.0 2.4 34 44-79 12-46 (46)
79 2eme_A Zinc finger protein 473 87.5 0.43 1.5E-05 28.5 2.8 34 44-79 12-46 (46)
80 2enc_A Zinc finger protein 224 87.5 0.39 1.4E-05 28.8 2.6 34 44-79 12-46 (46)
81 2jr7_A DPH3 homolog; DESR1, CS 87.5 0.22 7.4E-06 37.9 1.7 46 30-84 8-56 (89)
82 2gli_A Protein (five-finger GL 87.4 0.54 1.8E-05 34.9 3.8 52 44-95 3-63 (155)
83 2j7j_A Transcription factor II 87.4 0.35 1.2E-05 32.0 2.5 47 44-95 31-85 (85)
84 2en1_A Zinc finger protein 224 87.4 0.31 1.1E-05 29.3 2.1 34 44-79 12-46 (46)
85 2en8_A Zinc finger protein 224 87.3 0.37 1.3E-05 28.8 2.4 34 44-79 12-46 (46)
86 2eq4_A Zinc finger protein 224 87.3 0.44 1.5E-05 28.5 2.8 34 44-79 12-46 (46)
87 1tf6_A Protein (transcription 87.3 0.48 1.6E-05 36.7 3.6 52 44-95 72-130 (190)
88 2epw_A Zinc finger protein 268 87.2 0.34 1.2E-05 29.0 2.2 34 44-79 12-46 (46)
89 2en6_A Zinc finger protein 268 86.9 0.31 1.1E-05 29.3 1.8 34 44-79 12-46 (46)
90 2ytd_A Zinc finger protein 473 86.8 0.29 1E-05 29.4 1.7 34 44-79 12-46 (46)
91 2ep0_A Zinc finger protein 28 86.8 0.5 1.7E-05 28.3 2.8 34 44-79 12-46 (46)
92 1t1h_A Gspef-atpub14, armadill 86.6 0.27 9.3E-06 33.8 1.7 49 37-85 1-55 (78)
93 2egp_A Tripartite motif-contai 86.4 0.31 1.1E-05 33.3 1.8 47 39-85 7-65 (79)
94 2i13_A AART; DNA binding, zinc 86.4 0.4 1.4E-05 37.1 2.7 51 44-96 77-130 (190)
95 2elz_A Zinc finger protein 224 86.3 0.65 2.2E-05 27.9 3.1 34 44-79 12-46 (46)
96 2em7_A Zinc finger protein 224 86.2 0.58 2E-05 28.0 2.8 34 44-79 12-46 (46)
97 2ely_A Zinc finger protein 224 86.2 0.39 1.3E-05 28.9 2.1 34 44-79 12-46 (46)
98 2ytm_A Zinc finger protein 28 86.2 0.36 1.2E-05 29.2 1.9 34 44-79 12-46 (46)
99 2ysp_A Zinc finger protein 224 85.8 0.45 1.5E-05 28.6 2.2 34 44-79 12-46 (46)
100 2ep3_A Zinc finger protein 484 85.8 0.58 2E-05 28.0 2.7 34 44-79 12-46 (46)
101 1yop_A KTI11P; zinc finger, me 85.7 0.3 1E-05 36.5 1.6 45 30-83 8-55 (83)
102 2dmi_A Teashirt homolog 3; zin 85.5 0.3 1E-05 34.8 1.4 54 41-96 47-105 (115)
103 2csh_A Zinc finger protein 297 85.5 0.62 2.1E-05 32.8 3.1 50 44-96 10-62 (110)
104 1ubd_C Protein (YY1 zinc finge 85.4 0.77 2.6E-05 32.8 3.7 51 44-96 34-89 (124)
105 2eoo_A ZFP-95, zinc finger pro 85.4 0.39 1.3E-05 28.9 1.8 34 44-79 12-46 (46)
106 2jp9_A Wilms tumor 1; DNA bind 85.4 0.52 1.8E-05 33.3 2.7 47 45-93 37-88 (119)
107 2emm_A ZFP-95, zinc finger pro 85.1 0.52 1.8E-05 28.1 2.3 34 44-79 12-46 (46)
108 2yu8_A Zinc finger protein 347 85.1 0.35 1.2E-05 29.0 1.4 34 44-79 12-46 (46)
109 1vd4_A Transcription initiatio 84.9 0.46 1.6E-05 31.1 2.1 36 44-83 14-49 (62)
110 2eml_A Zinc finger protein 28 84.7 0.75 2.6E-05 27.5 2.8 34 44-79 12-46 (46)
111 2el6_A Zinc finger protein 268 84.4 0.79 2.7E-05 27.5 2.8 34 44-79 12-46 (46)
112 2ebt_A Krueppel-like factor 5; 84.4 1.1 3.8E-05 30.6 4.0 50 43-94 44-98 (100)
113 2kr4_A Ubiquitin conjugation f 84.3 0.77 2.6E-05 32.9 3.2 40 39-85 9-60 (85)
114 2ect_A Ring finger protein 126 84.0 0.4 1.4E-05 32.9 1.5 48 38-85 9-64 (78)
115 2ytt_A Zinc finger protein 473 83.4 0.46 1.6E-05 28.6 1.5 34 44-79 12-46 (46)
116 2emx_A Zinc finger protein 268 83.1 0.75 2.6E-05 27.2 2.3 34 44-79 10-44 (44)
117 2emp_A Zinc finger protein 347 83.1 0.61 2.1E-05 27.9 1.9 34 44-79 12-46 (46)
118 2em2_A Zinc finger protein 28 83.0 0.72 2.5E-05 27.7 2.3 34 44-79 12-46 (46)
119 2ecj_A Tripartite motif-contai 82.9 0.5 1.7E-05 30.3 1.6 19 38-56 9-27 (58)
120 2csy_A Zinc finger protein 183 82.7 0.21 7.3E-06 34.8 -0.4 48 37-84 8-60 (81)
121 3ztg_A E3 ubiquitin-protein li 81.8 0.15 5.1E-06 36.2 -1.5 46 38-83 7-60 (92)
122 2kre_A Ubiquitin conjugation f 81.7 1.6 5.6E-05 32.4 4.2 40 39-85 24-75 (100)
123 2ecw_A Tripartite motif-contai 81.6 0.25 8.7E-06 33.8 -0.3 47 39-85 14-71 (85)
124 1paa_A Yeast transcription fac 81.3 0.84 2.9E-05 24.3 1.9 26 44-69 2-28 (30)
125 2ecy_A TNF receptor-associated 81.3 0.84 2.9E-05 30.4 2.3 47 39-85 10-62 (66)
126 2yso_A ZFP-95, zinc finger pro 81.1 0.99 3.4E-05 27.0 2.4 34 44-79 12-46 (46)
127 2em8_A Zinc finger protein 224 80.8 0.84 2.9E-05 27.4 2.0 34 44-79 12-46 (46)
128 2ecv_A Tripartite motif-contai 80.6 0.29 9.8E-06 33.5 -0.3 47 39-85 14-71 (85)
129 1wgm_A Ubiquitin conjugation f 79.1 1.4 4.8E-05 32.6 3.1 40 39-85 17-69 (98)
130 1zw8_A Zinc-responsive transcr 79.0 1.7 5.9E-05 29.7 3.3 46 50-95 9-64 (64)
131 1tf6_A Protein (transcription 78.3 1.8 6.1E-05 33.4 3.6 51 44-96 104-161 (190)
132 1e4u_A Transcriptional repress 78.2 0.8 2.7E-05 32.7 1.4 43 42-85 9-62 (78)
133 2ysj_A Tripartite motif-contai 78.1 0.81 2.8E-05 30.1 1.3 18 38-55 14-31 (63)
134 2rpc_A Zinc finger protein ZIC 78.0 1.9 6.5E-05 32.0 3.5 51 44-96 62-117 (155)
135 2ctu_A Zinc finger protein 483 78.0 0.12 4.1E-06 33.5 -2.8 42 44-93 18-61 (73)
136 1wir_A Protein arginine N-meth 77.1 1.4 5E-05 34.8 2.7 31 43-73 14-45 (121)
137 2lt7_A Transcriptional regulat 77.0 1.3 4.5E-05 33.8 2.4 52 44-97 50-104 (133)
138 2ea6_A Ring finger protein 4; 76.7 0.66 2.2E-05 30.6 0.6 46 39-84 10-67 (69)
139 2jp9_A Wilms tumor 1; DNA bind 76.4 1.8 6.3E-05 30.3 2.9 51 44-96 6-63 (119)
140 6rxn_A Rubredoxin; electron tr 76.3 1.4 4.7E-05 29.5 2.0 34 44-82 4-39 (46)
141 2kiz_A E3 ubiquitin-protein li 75.8 0.29 1E-05 32.8 -1.4 47 39-85 9-63 (69)
142 2yti_A Zinc finger protein 347 75.8 1.8 6E-05 25.8 2.3 33 44-78 12-45 (46)
143 2lv2_A Insulinoma-associated p 75.4 1.5 5.2E-05 31.5 2.3 29 44-72 56-85 (85)
144 2enf_A Zinc finger protein 347 75.3 2 6.9E-05 25.5 2.5 33 44-78 12-45 (46)
145 2f42_A STIP1 homology and U-bo 75.2 2.2 7.7E-05 35.4 3.6 42 38-85 100-153 (179)
146 2yur_A Retinoblastoma-binding 75.2 0.54 1.8E-05 32.4 -0.2 46 37-82 8-61 (74)
147 2ct2_A Tripartite motif protei 74.3 2.1 7.2E-05 29.5 2.7 48 39-86 10-69 (88)
148 3hcs_A TNF receptor-associated 73.9 1.9 6.5E-05 33.9 2.7 45 44-91 82-129 (170)
149 4ayb_P DNA-directed RNA polyme 73.0 1.5 5.2E-05 30.0 1.6 16 38-53 17-32 (48)
150 2yts_A Zinc finger protein 484 73.0 2.5 8.6E-05 25.0 2.5 33 44-78 12-45 (46)
151 3mjh_B Early endosome antigen 72.6 1.9 6.5E-05 27.3 1.9 27 44-70 5-32 (34)
152 2emg_A Zinc finger protein 484 71.7 2.8 9.6E-05 24.8 2.5 33 44-78 12-45 (46)
153 2ep1_A Zinc finger protein 484 71.6 3.5 0.00012 24.3 3.0 33 44-78 12-45 (46)
154 2emi_A Zinc finger protein 484 71.3 2.7 9.1E-05 24.9 2.4 33 44-78 12-45 (46)
155 1twf_L ABC10-alpha, DNA-direct 71.2 1.6 5.5E-05 31.5 1.5 31 41-83 25-55 (70)
156 2d8t_A Dactylidin, ring finger 71.1 1.9 6.6E-05 29.1 1.8 48 42-89 13-65 (71)
157 2eq2_A Zinc finger protein 347 71.1 3.1 0.00011 24.6 2.6 33 44-78 12-45 (46)
158 1klr_A Zinc finger Y-chromosom 70.9 2.1 7.3E-05 22.3 1.7 21 45-65 3-24 (30)
159 2em3_A Zinc finger protein 28 70.1 2.7 9.1E-05 24.9 2.2 33 44-78 12-45 (46)
160 2lcq_A Putative toxin VAPC6; P 69.9 1.3 4.3E-05 35.2 0.8 31 40-83 128-158 (165)
161 2yth_A Zinc finger protein 224 69.5 3.8 0.00013 24.3 2.8 33 44-78 12-45 (46)
162 2k5c_A Uncharacterized protein 69.1 1.4 4.8E-05 33.6 0.8 13 43-55 50-62 (95)
163 3flo_B DNA polymerase alpha ca 68.7 1.2 4.2E-05 37.9 0.5 53 42-97 20-74 (206)
164 2epa_A Krueppel-like factor 10 68.6 5.2 0.00018 25.9 3.5 49 41-91 14-69 (72)
165 1iym_A EL5; ring-H2 finger, ub 68.1 0.66 2.3E-05 29.6 -1.0 39 45-83 6-53 (55)
166 3fl2_A E3 ubiquitin-protein li 67.7 0.46 1.6E-05 35.7 -2.1 45 40-85 48-99 (124)
167 1x6h_A Transcriptional repress 67.6 4 0.00014 26.9 2.8 38 43-82 46-84 (86)
168 2elp_A Zinc finger protein 406 67.5 2 6.7E-05 24.3 1.1 22 44-65 9-32 (37)
169 2eon_A ZFP-95, zinc finger pro 67.3 3.9 0.00013 24.3 2.5 33 44-78 12-45 (46)
170 2eq1_A Zinc finger protein 347 67.2 3.9 0.00013 24.2 2.5 33 44-78 12-45 (46)
171 2eow_A Zinc finger protein 347 67.0 2.6 9E-05 24.9 1.7 33 44-78 12-45 (46)
172 2en9_A Zinc finger protein 28 66.9 3 0.0001 24.8 1.9 33 44-78 12-45 (46)
173 1wii_A Hypothetical UPF0222 pr 66.8 1.7 5.8E-05 32.5 0.9 36 40-82 19-56 (85)
174 2epu_A Zinc finger protein 32; 66.6 3 0.0001 24.7 1.8 33 44-78 12-45 (45)
175 2el5_A Zinc finger protein 268 66.3 3.8 0.00013 23.7 2.2 32 44-77 10-42 (42)
176 2yrj_A Zinc finger protein 473 66.2 3.8 0.00013 24.1 2.3 33 44-78 12-45 (46)
177 2emj_A Zinc finger protein 28 65.8 2.9 9.8E-05 24.9 1.7 33 44-78 12-45 (46)
178 3pwf_A Rubrerythrin; non heme 65.7 2.9 9.9E-05 34.2 2.2 27 42-82 136-162 (170)
179 2eor_A Zinc finger protein 224 65.7 2.3 7.9E-05 25.1 1.2 33 44-78 12-45 (46)
180 2ytf_A Zinc finger protein 268 65.4 4.8 0.00016 23.7 2.7 33 44-78 12-45 (46)
181 2y43_A E3 ubiquitin-protein li 65.2 0.75 2.6E-05 33.1 -1.3 45 39-85 17-69 (99)
182 2ct1_A Transcriptional repress 65.1 3.4 0.00012 27.3 2.1 29 43-71 44-73 (77)
183 2c2l_A CHIP, carboxy terminus 64.9 6 0.00021 32.4 4.0 41 39-85 203-255 (281)
184 2ytp_A Zinc finger protein 484 64.8 5 0.00017 23.8 2.6 33 44-78 12-45 (46)
185 2dlk_A Novel protein; ZF-C2H2 64.8 3.4 0.00012 27.0 2.0 37 44-82 38-77 (79)
186 1bor_A Transcription factor PM 64.6 3.4 0.00012 27.0 2.0 42 43-84 5-48 (56)
187 2em6_A Zinc finger protein 224 64.5 4.8 0.00016 23.8 2.5 33 44-78 12-45 (46)
188 2em4_A Zinc finger protein 28 64.4 3.2 0.00011 24.6 1.7 33 44-78 12-45 (46)
189 2adr_A ADR1; transcription reg 63.9 4.5 0.00016 25.1 2.4 28 44-71 30-58 (60)
190 2ep4_A Ring finger protein 24; 63.8 1.1 3.7E-05 30.4 -0.6 45 40-84 11-63 (74)
191 2eoy_A Zinc finger protein 473 63.4 4 0.00014 24.2 2.0 34 44-78 12-46 (46)
192 3htk_C E3 SUMO-protein ligase 62.1 2.4 8.3E-05 37.7 1.1 45 41-85 178-232 (267)
193 2djb_A Polycomb group ring fin 62.1 0.85 2.9E-05 31.0 -1.4 46 38-85 9-62 (72)
194 1lko_A Rubrerythrin all-iron(I 61.3 2.8 9.6E-05 34.5 1.3 27 43-82 154-180 (191)
195 1x4j_A Ring finger protein 38; 60.6 1.1 3.9E-05 30.5 -1.0 42 43-84 22-71 (75)
196 1z6u_A NP95-like ring finger p 59.6 0.84 2.9E-05 36.1 -2.1 46 40-86 74-126 (150)
197 2l0b_A E3 ubiquitin-protein li 59.5 0.96 3.3E-05 32.4 -1.6 43 42-84 38-88 (91)
198 1ard_A Yeast transcription fac 58.8 4.1 0.00014 21.1 1.3 21 45-65 3-24 (29)
199 2en7_A Zinc finger protein 268 58.7 6.6 0.00023 22.7 2.4 32 44-77 12-44 (44)
200 1znf_A 31ST zinc finger from X 58.5 6.1 0.00021 20.2 2.0 20 45-64 2-22 (27)
201 2elu_A Zinc finger protein 406 58.2 4.5 0.00015 26.0 1.6 24 46-69 11-35 (37)
202 2elt_A Zinc finger protein 406 58.1 3.8 0.00013 22.6 1.1 22 44-65 9-31 (36)
203 2kdx_A HYPA, hydrogenase/ureas 57.5 3.9 0.00013 31.1 1.4 31 39-82 68-99 (119)
204 2eoz_A Zinc finger protein 473 57.4 5.2 0.00018 23.7 1.8 33 44-78 12-45 (46)
205 2eom_A ZFP-95, zinc finger pro 57.2 5.6 0.00019 23.6 1.9 33 44-78 12-45 (46)
206 2elq_A Zinc finger protein 406 57.0 4.8 0.00017 22.4 1.5 22 44-65 9-31 (36)
207 2enh_A Zinc finger protein 28 57.0 7.4 0.00025 23.0 2.4 32 44-77 12-44 (46)
208 1p7a_A BF3, BKLF, kruppel-like 56.9 6.7 0.00023 21.8 2.1 22 44-65 11-33 (37)
209 2l6l_A DNAJ homolog subfamily 56.6 2.5 8.7E-05 33.2 0.2 51 31-91 98-151 (155)
210 1srk_A Zinc finger protein ZFP 56.5 6.2 0.00021 21.6 1.9 22 44-65 7-29 (35)
211 2eoh_A Zinc finger protein 28 56.2 6.6 0.00023 23.2 2.1 32 44-77 12-44 (46)
212 1e8j_A Rubredoxin; iron-sulfur 56.1 5.2 0.00018 27.1 1.7 14 39-52 31-44 (52)
213 3l11_A E3 ubiquitin-protein li 56.1 3 0.0001 30.7 0.5 44 41-85 12-62 (115)
214 1jm7_A BRCA1, breast cancer ty 56.0 1 3.6E-05 32.6 -1.9 46 40-85 17-70 (112)
215 2elr_A Zinc finger protein 406 55.4 6.2 0.00021 21.7 1.8 22 44-65 9-31 (36)
216 1v87_A Deltex protein 2; ring- 55.2 1.2 4E-05 32.7 -1.8 13 72-84 81-93 (114)
217 2kvf_A Zinc finger and BTB dom 55.1 5.1 0.00018 20.7 1.3 21 44-64 3-24 (28)
218 2ct5_A Zinc finger BED domain 54.9 7.2 0.00025 28.1 2.4 17 84-100 45-61 (73)
219 2eof_A Zinc finger protein 268 54.7 8.6 0.00029 22.2 2.4 32 44-77 12-44 (44)
220 2ent_A Krueppel-like factor 15 54.7 10 0.00034 22.3 2.8 34 44-79 12-48 (48)
221 2ecn_A Ring finger protein 141 54.7 2.7 9.2E-05 28.0 0.1 45 40-84 11-59 (70)
222 2yrm_A B-cell lymphoma 6 prote 54.4 8.7 0.0003 22.5 2.4 33 44-78 10-43 (43)
223 2k5c_A Uncharacterized protein 54.2 3.8 0.00013 31.2 0.9 38 45-82 9-60 (95)
224 2emz_A ZFP-95, zinc finger pro 54.0 3.9 0.00013 24.2 0.8 32 44-77 12-44 (46)
225 2ckl_A Polycomb group ring fin 53.8 1.8 6.3E-05 31.5 -0.9 44 40-85 11-62 (108)
226 2lvu_A Zinc finger and BTB dom 58.9 2.7 9.4E-05 21.7 0.0 20 45-64 3-23 (26)
227 2m0f_A Zinc finger and BTB dom 53.2 6.5 0.00022 20.1 1.5 21 44-64 2-23 (29)
228 3ng2_A RNF4, snurf, ring finge 52.3 1.5 5.1E-05 29.2 -1.5 42 44-85 10-63 (71)
229 2m0e_A Zinc finger and BTB dom 52.2 8.7 0.0003 19.5 1.9 10 45-54 3-12 (29)
230 3lrq_A E3 ubiquitin-protein li 52.2 1.1 3.6E-05 32.7 -2.5 46 39-85 17-70 (100)
231 1ffk_W Ribosomal protein L37AE 52.2 2.8 9.6E-05 30.6 -0.2 16 37-52 20-35 (73)
232 2d9h_A Zinc finger protein 692 51.9 12 0.0004 24.5 3.0 29 44-72 38-67 (78)
233 2xeu_A Ring finger protein 4; 51.7 1.3 4.6E-05 28.6 -1.8 42 44-85 3-56 (64)
234 1rik_A E6APC1 peptide; E6-bind 51.6 5.9 0.0002 20.5 1.2 21 45-65 3-24 (29)
235 2yuc_A TNF receptor-associated 51.5 9.6 0.00033 26.0 2.5 46 44-91 16-63 (76)
236 1yuz_A Nigerythrin; rubrythrin 51.1 6.1 0.00021 33.0 1.7 27 43-83 170-196 (202)
237 3sp4_A Aprataxin-like protein; 50.9 4.5 0.00015 34.5 0.9 25 42-66 167-193 (204)
238 2lvt_A Zinc finger and BTB dom 55.8 3.3 0.00011 21.7 0.0 20 45-64 3-23 (29)
239 2yto_A Zinc finger protein 484 50.3 6.9 0.00024 23.1 1.5 32 44-77 12-44 (46)
240 2emb_A Zinc finger protein 473 50.1 11 0.00037 21.9 2.3 31 44-76 12-43 (44)
241 2els_A Zinc finger protein 406 49.9 7.6 0.00026 21.5 1.5 22 44-65 9-31 (36)
242 1wim_A KIAA0161 protein; ring 49.5 5.6 0.00019 28.3 1.1 48 44-91 5-72 (94)
243 3iuf_A Zinc finger protein UBI 49.4 8.5 0.00029 23.5 1.8 29 44-72 7-36 (48)
244 3jyw_9 60S ribosomal protein L 49.4 2.3 7.8E-05 31.1 -1.0 15 38-52 20-34 (72)
245 1vq8_Z 50S ribosomal protein L 49.1 4.8 0.00016 29.8 0.7 31 40-83 23-55 (83)
246 2eq3_A Zinc finger protein 347 49.1 11 0.00038 22.0 2.3 32 44-77 12-44 (46)
247 3j21_i 50S ribosomal protein L 48.5 2.5 8.4E-05 31.7 -1.0 16 38-53 29-44 (83)
248 2eoj_A Zinc finger protein 268 48.4 8.8 0.0003 22.2 1.7 32 44-77 12-44 (44)
249 3a43_A HYPD, hydrogenase nicke 47.9 5.8 0.0002 31.4 1.0 43 40-82 66-116 (139)
250 2ckl_B Ubiquitin ligase protei 47.2 1.5 5.3E-05 34.3 -2.4 46 39-84 49-101 (165)
251 2m0d_A Zinc finger and BTB dom 46.6 10 0.00035 19.4 1.7 22 44-65 3-25 (30)
252 2kvh_A Zinc finger and BTB dom 46.2 9.6 0.00033 19.6 1.5 21 44-64 3-24 (27)
253 2i5o_A DNA polymerase ETA; zin 45.8 8.6 0.00029 24.8 1.4 22 43-64 8-29 (39)
254 2elm_A Zinc finger protein 406 45.7 10 0.00035 21.4 1.7 25 44-68 9-34 (37)
255 2yte_A Zinc finger protein 473 45.2 17 0.0006 20.6 2.7 24 44-68 10-34 (42)
256 2djr_A Zinc finger BED domain- 44.6 4.6 0.00016 29.5 -0.0 14 86-99 50-63 (76)
257 2yu5_A Zinc finger protein 473 44.6 9.9 0.00034 22.1 1.5 22 44-65 12-34 (44)
258 3hct_A TNF receptor-associated 43.8 23 0.00078 26.1 3.8 47 39-85 13-65 (118)
259 3iz5_m 60S ribosomal protein L 43.7 3.3 0.00011 31.6 -0.9 16 38-53 30-45 (92)
260 3izc_m 60S ribosomal protein R 43.6 3.2 0.00011 31.7 -1.0 15 38-52 30-44 (92)
261 1rmd_A RAG1; V(D)J recombinati 43.4 3.2 0.00011 30.5 -1.0 47 39-85 18-70 (116)
262 1jm7_B BARD1, BRCA1-associated 43.3 3.3 0.00011 30.7 -1.0 45 40-84 18-66 (117)
263 2czr_A TBP-interacting protein 43.2 8.1 0.00028 33.4 1.3 26 40-65 150-175 (226)
264 2kfq_A FP1; protein, de novo p 42.6 12 0.00042 20.4 1.6 20 45-64 3-23 (32)
265 2elx_A Zinc finger protein 406 42.0 12 0.00042 20.2 1.6 22 44-65 7-29 (35)
266 2e72_A POGO transposable eleme 41.7 12 0.00041 25.6 1.7 22 43-64 11-33 (49)
267 2qgp_A HNH endonuclease; Q39X4 41.2 3.7 0.00013 31.2 -1.0 43 42-84 33-81 (112)
268 1yk4_A Rubredoxin, RD; electro 41.0 8.2 0.00028 26.1 0.8 14 39-52 30-43 (52)
269 2kn9_A Rubredoxin; metalloprot 40.6 8.8 0.0003 28.5 1.0 8 75-82 62-69 (81)
270 2ea5_A Cell growth regulator w 40.5 5 0.00017 27.6 -0.4 42 43-85 14-58 (68)
271 2ytb_A Zinc finger protein 32; 40.4 18 0.00062 20.5 2.2 24 44-68 11-35 (42)
272 2ept_A Zinc finger protein 32; 40.1 19 0.00065 20.4 2.3 24 44-68 10-34 (41)
273 4ic3_A E3 ubiquitin-protein li 39.7 4 0.00014 28.1 -1.0 45 40-85 20-67 (74)
274 2l7x_A Envelope glycoprotein; 39.6 8.8 0.0003 28.3 0.8 21 43-63 29-49 (77)
275 2eou_A Zinc finger protein 473 39.6 15 0.00051 21.3 1.8 22 44-65 12-34 (44)
276 2en3_A ZFP-95, zinc finger pro 39.5 6.7 0.00023 23.1 0.1 22 44-65 12-34 (46)
277 1dx8_A Rubredoxin; electron tr 39.3 11 0.00037 27.0 1.2 12 40-51 36-47 (70)
278 2kvg_A Zinc finger and BTB dom 38.8 12 0.00039 19.5 1.1 21 44-64 3-24 (27)
279 2elo_A Zinc finger protein 406 38.8 11 0.00038 20.8 1.1 22 44-65 9-31 (37)
280 2elv_A Zinc finger protein 406 38.7 15 0.00052 20.1 1.6 22 44-65 9-31 (36)
281 2v3b_B Rubredoxin 2, rubredoxi 38.6 9.2 0.00031 26.1 0.8 14 39-52 31-44 (55)
282 1rim_A E6APC2 peptide; E6-bind 38.5 16 0.00053 20.1 1.7 20 45-64 3-23 (33)
283 3pih_A Uvrabc system protein A 38.3 11 0.00039 38.2 1.7 37 41-82 246-282 (916)
284 1g25_A CDK-activating kinase a 38.0 3.6 0.00012 27.2 -1.4 41 44-85 3-55 (65)
285 2a25_A Ubiquitin ligase SIAH1; 37.7 12 0.00042 30.7 1.5 51 44-97 6-65 (193)
286 4a17_Y RPL37A, 60S ribosomal p 37.6 4.5 0.00015 31.5 -1.1 15 38-52 30-44 (103)
287 2akl_A PHNA-like protein PA012 37.5 9.4 0.00032 31.1 0.8 27 44-82 27-53 (138)
288 4ayc_A E3 ubiquitin-protein li 37.4 2.2 7.7E-05 32.7 -2.8 44 41-84 50-98 (138)
289 2lvr_A Zinc finger and BTB dom 43.5 7.1 0.00024 20.2 0.0 21 44-64 3-24 (30)
290 3cc2_Z 50S ribosomal protein L 36.7 5.4 0.00018 31.6 -0.8 34 38-83 54-88 (116)
291 2lo3_A SAGA-associated factor 36.0 13 0.00044 24.9 1.1 26 44-70 17-42 (44)
292 1l8d_A DNA double-strand break 35.9 9.4 0.00032 28.2 0.5 11 46-56 49-59 (112)
293 1s24_A Rubredoxin 2; electron 35.7 11 0.00037 28.4 0.8 7 75-81 70-76 (87)
294 4rxn_A Rubredoxin; electron tr 34.1 15 0.0005 25.2 1.2 14 39-52 31-44 (54)
295 4ap4_A E3 ubiquitin ligase RNF 33.7 13 0.00044 27.0 0.9 36 45-85 49-84 (133)
296 2ghf_A ZHX1, zinc fingers and 33.6 16 0.00054 26.9 1.4 38 44-82 50-88 (102)
297 2js4_A UPF0434 protein BB2007; 32.6 14 0.00048 26.4 0.9 33 39-82 3-35 (70)
298 2jr6_A UPF0434 protein NMA0874 32.5 14 0.00048 26.2 0.9 33 39-82 3-35 (68)
299 2hf1_A Tetraacyldisaccharide-1 31.9 14 0.00048 26.3 0.8 33 39-82 3-35 (68)
300 2jne_A Hypothetical protein YF 31.3 7.6 0.00026 30.2 -0.7 56 45-104 33-95 (101)
301 2ecm_A Ring finger and CHY zin 31.1 5.3 0.00018 25.1 -1.4 11 74-84 44-54 (55)
302 2r6f_A Excinuclease ABC subuni 30.6 16 0.00055 37.6 1.3 37 41-82 264-300 (972)
303 2en2_A B-cell lymphoma 6 prote 30.4 23 0.0008 20.1 1.5 22 44-65 11-33 (42)
304 3o9x_A Uncharacterized HTH-typ 30.2 7.1 0.00024 29.1 -1.0 12 72-83 35-46 (133)
305 1pft_A TFIIB, PFTFIIBN; N-term 30.0 11 0.00036 24.5 -0.1 35 44-89 5-40 (50)
306 3mkr_B Coatomer subunit alpha; 29.7 15 0.00052 33.3 0.9 34 43-89 277-311 (320)
307 1njq_A Superman protein; zinc- 29.7 24 0.00083 19.8 1.5 22 44-65 6-28 (39)
308 2ecg_A Baculoviral IAP repeat- 29.6 5 0.00017 27.5 -1.8 46 39-85 20-68 (75)
309 2ecl_A Ring-box protein 2; RNF 29.5 5.4 0.00018 27.9 -1.7 12 73-84 64-75 (81)
310 2eos_A B-cell lymphoma 6 prote 29.3 28 0.00096 19.8 1.8 24 44-68 11-35 (42)
311 3dpl_R Ring-box protein 1; ubi 29.3 6.2 0.00021 29.7 -1.5 23 60-82 73-98 (106)
312 3mv2_A Coatomer subunit alpha; 29.2 16 0.00056 33.2 1.0 35 42-89 285-320 (325)
313 2pk7_A Uncharacterized protein 28.8 16 0.00055 26.0 0.7 33 39-82 3-35 (69)
314 4a0k_B E3 ubiquitin-protein li 28.2 12 0.00042 28.8 0.0 37 46-82 50-109 (117)
315 2epv_A Zinc finger protein 268 28.1 32 0.0011 19.9 1.9 24 44-68 12-36 (44)
316 2ab3_A ZNF29; zinc finger prot 27.7 24 0.00083 17.8 1.2 20 45-64 3-25 (29)
317 2d8s_A Cellular modulator of i 27.6 14 0.00049 26.3 0.3 11 73-83 58-68 (80)
318 2epc_A Zinc finger protein 32; 27.6 27 0.00092 19.7 1.5 24 44-68 11-35 (42)
319 4dvc_A Thiol:disulfide interch 27.1 7.1 0.00024 29.4 -1.5 10 43-52 29-38 (184)
320 1va1_A Transcription factor SP 26.2 30 0.001 19.3 1.5 21 44-64 8-31 (37)
321 2jvm_A Uncharacterized protein 25.7 24 0.00084 26.2 1.2 15 43-57 52-66 (80)
322 2jvx_A NF-kappa-B essential mo 25.3 34 0.0012 20.6 1.6 22 44-65 3-25 (28)
323 2jny_A Uncharacterized BCR; st 25.3 22 0.00075 25.2 0.9 33 38-81 4-36 (67)
324 2vje_B MDM4 protein; proto-onc 25.2 6.4 0.00022 26.4 -1.9 39 44-84 7-55 (63)
325 2jrr_A Uncharacterized protein 24.9 21 0.00073 25.6 0.8 12 43-54 39-50 (67)
326 1yui_A GAGA-factor; complex (D 24.9 32 0.0011 21.0 1.5 22 44-65 24-46 (54)
327 3fz5_A Possible 2-hydroxychrom 24.4 6.9 0.00024 31.2 -2.2 35 181-217 152-186 (202)
328 3knv_A TNF receptor-associated 24.3 13 0.00046 28.8 -0.4 44 39-83 26-76 (141)
329 2ygr_A Uvrabc system protein A 24.3 27 0.00093 36.0 1.7 36 42-82 273-309 (993)
330 1dl6_A Transcription factor II 23.7 22 0.00077 24.1 0.6 38 41-89 8-46 (58)
331 3mhs_C SAGA-associated factor 23.7 32 0.0011 26.5 1.6 26 40-65 66-91 (99)
332 3vhs_A ATPase wrnip1; zinc fin 23.4 32 0.0011 20.9 1.2 19 73-91 6-25 (29)
333 1chc_A Equine herpes virus-1 r 23.3 12 0.0004 24.5 -0.8 41 44-84 5-51 (68)
334 2imf_A HCCA isomerase, 2-hydro 23.3 7.4 0.00025 30.8 -2.2 23 195-217 158-180 (203)
335 3h0g_L DNA-directed RNA polyme 22.5 37 0.0013 24.0 1.6 30 42-83 19-48 (63)
336 1r4w_A Glutathione S-transfera 22.5 8 0.00027 31.3 -2.2 35 181-217 161-199 (226)
337 2epp_A POZ-, at HOOK-, and zin 22.0 56 0.0019 22.3 2.4 25 44-69 13-38 (66)
338 2jrp_A Putative cytoplasmic pr 21.9 14 0.00047 27.5 -0.8 11 73-83 31-41 (81)
339 2znm_A Thiol:disulfide interch 21.8 35 0.0012 26.1 1.5 18 43-60 30-48 (195)
340 2eox_A Zinc finger protein 473 21.1 28 0.00094 20.0 0.6 22 44-65 12-34 (44)
341 2gmg_A Hypothetical protein PF 21.1 53 0.0018 25.4 2.4 28 43-82 66-93 (105)
342 2yho_A E3 ubiquitin-protein li 21.0 5 0.00017 28.3 -3.2 45 40-85 14-61 (79)
343 3gl5_A Putative DSBA oxidoredu 20.9 9.4 0.00032 31.7 -2.1 13 40-52 6-18 (239)
344 3rpp_A Glutathione S-transfera 20.9 9.1 0.00031 31.6 -2.2 14 40-53 9-22 (234)
345 3t6p_A Baculoviral IAP repeat- 20.8 15 0.00053 33.0 -0.8 44 41-85 292-338 (345)
346 1sp2_A SP1F2; zinc finger, tra 20.6 73 0.0025 16.5 2.3 21 45-65 3-26 (31)
No 1
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.94 E-value=0.00064 Score=46.15 Aligned_cols=54 Identities=20% Similarity=0.452 Sum_probs=44.2
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~~ 97 (220)
.|.|+.|+..| ....|..|+...|.-+.+.-.|++|.... ..++..|+...|+.
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 59999998855 46789999988888777888999999873 55899999777763
No 2
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=96.88 E-value=0.0008 Score=44.10 Aligned_cols=54 Identities=20% Similarity=0.483 Sum_probs=43.9
Q ss_pred ceecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 43 ~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
..|.|+.|+..| ....|..|....|....+.-.|++|.... ..++..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 369999999866 46789999988786667888999999874 4588999977775
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=95.95 E-value=0.0053 Score=38.79 Aligned_cols=51 Identities=20% Similarity=0.308 Sum_probs=37.9
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccccccc--cchhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~--vg~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|... -..++..|+...|+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRT-HTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHH-HHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CccCCCCcchhCChHHHHHHHHH-cCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 58999998855 56778899876 533 356789999986 35588999977664
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.84 E-value=0.0083 Score=41.46 Aligned_cols=47 Identities=19% Similarity=0.480 Sum_probs=21.1
Q ss_pred ecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhh
Q 027681 45 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHF 91 (220)
Q Consensus 45 F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hi 91 (220)
|.|+.|+..| ....|..|+...|....+.-.|++|...- ..++..|+
T Consensus 36 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~ 85 (95)
T 2yt9_A 36 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI 85 (95)
T ss_dssp EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHH
T ss_pred CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHH
Confidence 5555555433 33445555544332223444555555442 22455555
No 5
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.67 E-value=0.0075 Score=39.91 Aligned_cols=48 Identities=25% Similarity=0.462 Sum_probs=38.4
Q ss_pred ceecCCCCCccchHHHhhhhhhcccCCCccccccc-ccccc--cchhHhhhhhh
Q 027681 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCP-LCAAN--LGKDAAEHFMV 93 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCP-VCa~~--vg~D~i~Hit~ 93 (220)
-.|.|++|+..|....|..|... ...++..|+ +|... ...++..|++.
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 36999999998888889999876 456778999 99986 34488888843
No 6
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.55 E-value=0.012 Score=39.06 Aligned_cols=52 Identities=17% Similarity=0.327 Sum_probs=40.0
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~~ 97 (220)
.|.|+.|+..| ....|..|+.. |.- .+.-.|++|.... ..++..|+...|+-
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 9 PEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 59999999865 46778899876 654 3567999999974 45889999776663
No 7
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.48 E-value=0.012 Score=39.68 Aligned_cols=53 Identities=17% Similarity=0.327 Sum_probs=40.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCC--ccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFE--MKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e--~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+...|..+ .+.-.|++|.... ..++..|+...|+
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~ 72 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG 72 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccC
Confidence 59999998855 4567889998767654 3668999999873 4588899866555
No 8
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.18 E-value=0.017 Score=42.03 Aligned_cols=49 Identities=20% Similarity=0.384 Sum_probs=38.9
Q ss_pred eecCCCCCccc--hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhc
Q 027681 44 CFPCPFCYLEI--EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 95 (220)
Q Consensus 44 ~F~CPfC~ed~--D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH 95 (220)
.|.|+.|++.| ....|..|+.. | ..+.-.|++|.... ..++..|+..-|
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H 86 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANH 86 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred CcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence 59999999998 78899999876 6 55778999999874 458888943334
No 9
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.18 E-value=0.004 Score=44.59 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=40.8
Q ss_pred eecCCCCCccc--hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhccc
Q 027681 44 CFPCPFCYLEI--EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPfC~ed~--D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~~ 97 (220)
.|.|+.|+..| ....|..|+.. |.-..+.-.|++|.... ..++..|++..|+.
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~~~-h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEV-CQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHH-HHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CcCCCCCCCChhhhHHHHHHHHHH-HcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 59999999877 57889999876 43334567999999874 45889999777663
No 10
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.09 E-value=0.013 Score=39.04 Aligned_cols=50 Identities=18% Similarity=0.374 Sum_probs=30.1
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 95 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH 95 (220)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...- ..++..|++..+
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 81 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFI-HTG-EKPHKCQVCGKAFSQSSNLITHSRKHT 81 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHT-CCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred CeeCCcCChhhCCHHHHHHHHHH-hcC-CCCCcCCCcchhhCChHHHHHHHHhhC
Confidence 47777777644 45667777664 322 2456777777653 346777765433
No 11
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.09 E-value=0.021 Score=38.48 Aligned_cols=52 Identities=17% Similarity=0.291 Sum_probs=39.0
Q ss_pred ceecCCCCCccch-HHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 43 ACFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 43 ~~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
..|.|+.|+..|. ...|..|+.. |.. .+.-.|++|.... ..++..|+.+.++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRT-HTG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTT-TCC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHH-cCC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 3699999998664 6778899875 543 3567999999873 4588899866544
No 12
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.99 E-value=0.02 Score=38.18 Aligned_cols=51 Identities=16% Similarity=0.303 Sum_probs=38.1
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+++.++
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRV-HTG-EKPYKCLECGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHG-GGC-SCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred CccCCCCCCccCCHHHHHHHHHh-cCC-CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 59999999866 56778899876 543 4567999999874 4588899865443
No 13
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=94.87 E-value=0.025 Score=35.58 Aligned_cols=50 Identities=16% Similarity=0.430 Sum_probs=37.5
Q ss_pred ecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 45 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 45 F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRT-HTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH-TSS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHh-cCC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 7899999865 56778899876 543 4567899999874 4588899865544
No 14
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.87 E-value=0.032 Score=39.27 Aligned_cols=52 Identities=17% Similarity=0.379 Sum_probs=35.9
Q ss_pred ceecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 43 ~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
..|.|++|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...++
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERT-HTD-ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHH-HCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred cCeECCCCCCccCCHHHHHHHHHH-cCC-CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 468899998765 46678888775 332 3557899998864 4478888765444
No 15
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.86 E-value=0.031 Score=37.34 Aligned_cols=53 Identities=19% Similarity=0.327 Sum_probs=39.2
Q ss_pred cceecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 42 KACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 42 r~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
...|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+++.++
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTV-HTG-EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHH-HCC-CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHH-cCC-CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 3469999999866 46778899875 543 3567899999874 4588899866544
No 16
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.85 E-value=0.027 Score=38.87 Aligned_cols=51 Identities=16% Similarity=0.307 Sum_probs=34.3
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...++
T Consensus 8 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 61 (96)
T 2dmd_A 8 PHKCEVCGKCFSRKDKLKTHMRC-HTG-VKPYKCKTCDYAAADSSSLNKHLRIHSD 61 (96)
T ss_dssp CCCBTTTTBCCCCHHHHHHHGGG-CCC-CCSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-cCC-CCCEeCCCCCCccCCHHHHHHHHHHhCC
Confidence 58888888755 45678888775 332 3456788888763 4477788865443
No 17
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=94.52 E-value=0.037 Score=35.25 Aligned_cols=51 Identities=22% Similarity=0.371 Sum_probs=37.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 48999998866 46788999876 543 3567899999874 4588888744443
No 18
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.46 E-value=0.027 Score=38.83 Aligned_cols=51 Identities=18% Similarity=0.335 Sum_probs=39.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...++
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 60 (95)
T 2yt9_A 7 GVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDG 60 (95)
T ss_dssp CEECSSSCCEESSSHHHHHHHHH-SCS-SCSEECSSSCCEESCHHHHHHHHHHHCC
T ss_pred CeECCCCCCccCChHHHHHHHHh-cCC-CCCCcCCCCCCccCCHHHHHHHHHHhcC
Confidence 69999999866 46789999876 533 3567899999874 4589999977665
No 19
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=94.25 E-value=0.038 Score=40.52 Aligned_cols=50 Identities=24% Similarity=0.623 Sum_probs=37.9
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~~ 97 (220)
.|.|+.|+..|. ...|..|+.. | .++-.|++|...- ..++..|++..|+-
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 589999998664 5668888876 5 4556899999874 55888999777763
No 20
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=94.24 E-value=0.049 Score=40.93 Aligned_cols=57 Identities=18% Similarity=0.279 Sum_probs=42.8
Q ss_pred CccceecCCCCCccc-hHHHhhhhhhcccCCCccc-------cccccccccc--chhHhhhhhhhcc
Q 027681 40 DVKACFPCPFCYLEI-EAHMICSHLQEEHCFEMKN-------AVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 40 d~r~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~-------vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
+....|+|+.|+..| ....|..|+...|..+... -.|++|.... ..++..|+...++
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 445679999999866 5678999999888876432 4799999874 4478889865444
No 21
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.20 E-value=0.034 Score=38.35 Aligned_cols=51 Identities=16% Similarity=0.357 Sum_probs=38.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+.+.|+
T Consensus 36 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 89 (96)
T 2dmd_A 36 PYKCKTCDYAAADSSSLNKHLRI-HSD-ERPFKCQICPYASRNSSQLTVHLRSHTG 89 (96)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred CEeCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence 59999998855 56788899876 433 3567899999863 4588999866554
No 22
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.17 E-value=0.014 Score=40.78 Aligned_cols=48 Identities=27% Similarity=0.453 Sum_probs=38.9
Q ss_pred ceecCCCCCccchHHHhhhhhhcccCCCccccccccccccc-chhHhhhhhh
Q 027681 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL-GKDAAEHFMV 93 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v-g~D~i~Hit~ 93 (220)
-.+.|+||+..|-...|-.|. .|+- .++..||.|...+ ..++..|+.+
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~ 64 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEV 64 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHH
T ss_pred cccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHH
Confidence 368999999999999999997 4654 5778999999864 4588888844
No 23
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.06 E-value=0.051 Score=38.23 Aligned_cols=52 Identities=17% Similarity=0.315 Sum_probs=38.5
Q ss_pred ceecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 43 ~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
..|.|+.|+..| ....|..|+.. |.- .+.-.|++|.... ..++..|+++.++
T Consensus 44 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 44 RPYTCDICHKAFRRQDHLRDHRYI-HSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp CCCBCSSSCCBCSCHHHHHHHGGG-SCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred CCcCCCCccchhCCHHHHHHHHHH-hCC-CCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence 359999998865 56788999776 433 3567899999874 4588899865444
No 24
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.94 E-value=0.055 Score=38.62 Aligned_cols=53 Identities=15% Similarity=0.300 Sum_probs=33.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccC-CCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHC-FEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~-~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+...|. ...+.-.|++|.... ..++..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 47788887644 56677778776432 234556788887763 3467777755444
No 25
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.83 E-value=0.038 Score=38.10 Aligned_cols=54 Identities=20% Similarity=0.507 Sum_probs=38.1
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhccchh
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHASSL 99 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~~~f 99 (220)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++|...- ..++..|+...|+..+
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~ 59 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHRDIQHILPI 59 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcc
Confidence 48899998755 45678888775 543 3456899998863 4588888888776444
No 26
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.64 E-value=0.031 Score=37.58 Aligned_cols=53 Identities=17% Similarity=0.354 Sum_probs=39.2
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCC--Cccccccccccccc--chhHhhhhhhhccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCF--EMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~--e~k~vVCPVCa~~v--g~D~i~Hit~QH~~ 97 (220)
.|.|+.|+..| ....|..|+.. |.- ..+.-.|++|.... ..++..|+...|..
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~ 64 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred CeECCCCCCeeCCHHHHHHHHHH-hhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence 58999999866 45678889766 433 24667999999874 45888998666653
No 27
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.62 E-value=0.087 Score=36.27 Aligned_cols=55 Identities=18% Similarity=0.272 Sum_probs=40.1
Q ss_pred cceecCCCCCccc-hHHHhhhhhhcccCCCccc-------cccccccccc--chhHhhhhhhhcc
Q 027681 42 KACFPCPFCYLEI-EAHMICSHLQEEHCFEMKN-------AVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 42 r~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~-------vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
...|+|+.|+..| ....|..|+...|.-+... -.|++|.... ..++..|+++.++
T Consensus 23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 3467899998866 4678899988767665321 5899999874 4588899866443
No 28
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=93.62 E-value=0.049 Score=36.97 Aligned_cols=50 Identities=18% Similarity=0.500 Sum_probs=29.0
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 95 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH 95 (220)
.|.|++|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+.+.+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRT-HTG-EKPFACDICGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHH-HHC-CCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence 47777776644 34556677654 332 2445677777653 346677765443
No 29
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=93.49 E-value=0.055 Score=38.62 Aligned_cols=52 Identities=21% Similarity=0.423 Sum_probs=39.2
Q ss_pred ceecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 43 ~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
..|.|++|+..| ....|..|+.. |.- .++-.|++|.... ..++..|+...|+
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 119 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVS-HTG-EMPYKCSSCSQQFMQKKDLQSHMIKLHS 119 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHH-HSS-SCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred CCeECCCCCCccCCHHHHHHHHHH-cCC-CCCccCCCccchhCCHHHHHHHHHHHCC
Confidence 469999998855 46778899876 433 3567899999874 4589999966665
No 30
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=93.22 E-value=0.054 Score=35.98 Aligned_cols=50 Identities=20% Similarity=0.537 Sum_probs=37.5
Q ss_pred ecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 45 FPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 45 F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
|.|+.|+..| ....|..|+.. |. ..+.-.|++|.... ..++..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLI-HS-DTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHH-HH-TCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCchhHHHHHHH-cC-CCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 7899998865 56778899886 43 24567899999874 4588899865544
No 31
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.03 E-value=0.11 Score=36.82 Aligned_cols=52 Identities=21% Similarity=0.400 Sum_probs=35.3
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~~ 97 (220)
.|.|++|++.| ....|..|+.. |.- .+.-.|++|.... ..++..|++..|..
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKI-HTG-IKPYECNICAKRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTT-TCC-CCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH-cCC-CCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence 48888887754 34677788765 433 2456888888863 45788888665554
No 32
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=92.93 E-value=0.09 Score=37.85 Aligned_cols=49 Identities=22% Similarity=0.495 Sum_probs=30.0
Q ss_pred eecCC--CCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhc
Q 027681 44 CFPCP--FCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQH 95 (220)
Q Consensus 44 ~F~CP--fC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH 95 (220)
.|.|| .|+..| +...|..|+.. | ..+.-.|++|.... ..++..|+...+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~-h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 58 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHT-H--GPRVHVCAECGKAFVESSKLKRHQLVHT 58 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGG-G--SCCCEECTTTCCEESSHHHHHHHGGGTS
T ss_pred cccCCCCCCcCccCCHHHHHHHHHH-c--CCCCeECCCCCchhCCHHHHHHHHHHcC
Confidence 46777 677655 45567777653 5 44556777777653 346667765433
No 33
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.57 E-value=0.057 Score=40.31 Aligned_cols=51 Identities=25% Similarity=0.459 Sum_probs=33.8
Q ss_pred eecCCC--CCccc-hHHHhhhhhhcccCCCcccccccc--ccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--g~D~i~Hit~QH~ 96 (220)
.|.|++ |+..| ....|..|+.. |.. .+.-.|++ |.... ..++..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRS-HTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHH-TTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHH-cCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 488886 87744 45678888875 433 35568888 88763 4477888744443
No 34
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=92.55 E-value=0.1 Score=37.84 Aligned_cols=52 Identities=21% Similarity=0.351 Sum_probs=39.9
Q ss_pred ceecCCCCCccch-HHHhhhhhhcccCCCcccccccccccc--cchhHhhhhhhhcc
Q 027681 43 ACFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMVQHA 96 (220)
Q Consensus 43 ~~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVCa~~--vg~D~i~Hit~QH~ 96 (220)
..|.||.|+..|. ...|..|+.. |.- .++-.|++|... -..++.+|+...|.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~ 81 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRL-LHA-AQVFPCKYCPATFYSSPGLTRHINKCHP 81 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHT-TSC-SSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhh-ccC-CCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence 3699999999765 5789999876 543 467799999997 45689999855554
No 35
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=92.55 E-value=0.089 Score=33.41 Aligned_cols=39 Identities=13% Similarity=0.311 Sum_probs=30.1
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
.|.|+.|+..| ....|..|+...|.- .+.-.|++|...-
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F 51 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGP 51 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSS
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCC
Confidence 59999999866 567788998766765 3567899998653
No 36
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.93 E-value=0.085 Score=37.45 Aligned_cols=45 Identities=24% Similarity=0.454 Sum_probs=34.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhh
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFM 92 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit 92 (220)
.|.|+.|+..| ....|..|+.. | .+.-.|++|.... ..++..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 59999998865 56678888876 5 3677899999874 457888883
No 37
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.88 E-value=0.12 Score=31.17 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=25.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGG-TSCC-CCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhhh-cCCC-CCCCCCCC
Confidence 59999998855 45678888754 6543 67789998
No 38
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=91.34 E-value=0.14 Score=36.37 Aligned_cols=50 Identities=22% Similarity=0.462 Sum_probs=37.3
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+. |.- .+.-.|++|.... ..++..|+...|.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHcC
Confidence 58999998855 4677889983 654 4667999999874 4588999854443
No 39
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=91.20 E-value=0.17 Score=30.41 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=26.4
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+...|.-+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~-k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTGE-KPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTTS-CSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCCC-CCCCCCCC
Confidence 599999988654 577888987457543 56789988
No 40
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.15 E-value=0.11 Score=37.13 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=32.2
Q ss_pred eecCCCCCccc-hHHHhhhhhhcc-cCCCccccccccccccc----chhHhhhhhhhc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEE-HCFEMKNAVCPLCAANL----GKDAAEHFMVQH 95 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~ee-H~~e~k~vVCPVCa~~v----g~D~i~Hit~QH 95 (220)
.|.|+.|+..| ....|..|+... |..+.....|++|.... ..++..|+.+.+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 48899998755 456788887751 32233334588887643 346777775433
No 41
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=90.82 E-value=0.027 Score=38.83 Aligned_cols=51 Identities=12% Similarity=0.084 Sum_probs=40.1
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~~ 97 (220)
.|.|+.|+..| ....|..|+...|. ...+|+.|.... ..++..|+...|+.
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~ 84 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKL 84 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 59999999866 56889999998873 678999998864 44788999665553
No 42
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.55 E-value=0.16 Score=30.67 Aligned_cols=34 Identities=18% Similarity=0.114 Sum_probs=25.7
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 59999999865 45678888765 6554 66789998
No 43
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=90.47 E-value=0.18 Score=30.97 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=27.8
Q ss_pred ceecCCCCCccc-hHHHhhhhhhcccCCCccccccccccc
Q 027681 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAA 81 (220)
Q Consensus 43 ~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~ 81 (220)
..|.|+.|+..| ....|..|+.. |.- .++-.|++|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C~k 48 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPSSG 48 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG-SCS-CCCCCSCCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh-cCC-CCCccCCCCCC
Confidence 369999999866 56778899765 644 36678999963
No 44
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=90.35 E-value=0.18 Score=34.20 Aligned_cols=48 Identities=25% Similarity=0.437 Sum_probs=37.8
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccccccc--cchhHhhhhhh
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMV 93 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVCa~~--vg~D~i~Hit~ 93 (220)
-|.|+.|+..|. ...|..|... |.- .++-.|++|... -..++..|+++
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~ 54 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRA-HLG-YRPRSCPECGKCFRDQSEVNRHLKV 54 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HHT-CCCEECTTTCCEESSHHHHHHHGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHHH-hCC-CcCeECCCCCCCcCCHHHHHHHhCc
Confidence 489999999764 5678899865 754 467799999997 45689999865
No 45
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=90.20 E-value=0.26 Score=29.63 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=25.6
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 59999998855 45678889765 654 366789998
No 46
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=90.18 E-value=0.16 Score=30.57 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=25.6
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGCC-CCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 59999999865 45678888765 6543 66789998
No 47
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=90.07 E-value=0.29 Score=33.63 Aligned_cols=55 Identities=16% Similarity=0.360 Sum_probs=35.4
Q ss_pred CccceecCCC--CCccc-hHHHhhhhhhcccCCCccccccc--cccccc--chhHhhhhhhhcc
Q 027681 40 DVKACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCP--LCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 40 d~r~~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCP--VCa~~v--g~D~i~Hit~QH~ 96 (220)
+.+..|.|++ |+..| ....|..|+.. |.. .+.-.|| +|.... ..++..|+...++
T Consensus 11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp CSCCCEECCSSSCCCEESCHHHHHHHHHH-HSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred ccCcceEcCCCCCCCcccCHHHHHHHHHH-hCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 3445788887 87755 56777888775 432 3456786 587753 4477788765544
No 48
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.77 E-value=0.15 Score=30.77 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=25.5
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHHH-HCC-CCCCCCCCC
Confidence 599999998654 5678888764 644 366789998
No 49
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=89.74 E-value=0.23 Score=29.82 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=25.4
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|- ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HTG-VKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SSS-CCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999998654 5678888765 654 456789998
No 50
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.67 E-value=0.28 Score=29.39 Aligned_cols=34 Identities=12% Similarity=-0.024 Sum_probs=25.6
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999998855 45678889765 654 356789998
No 51
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.57 E-value=0.2 Score=30.22 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=25.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMV-HTAE-KPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-TTCC-CSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 59999998865 45678888764 6543 66789988
No 52
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.47 E-value=0.29 Score=32.38 Aligned_cols=52 Identities=25% Similarity=0.537 Sum_probs=38.7
Q ss_pred eecCCC--CCccc-hHHHhhhhhhcccCCCcccccccc--ccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--g~D~i~Hit~QH~ 96 (220)
.|+|++ |+..| ....|..|+...|.. .+.-.|++ |.... ..++..|+.+.++
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 65 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence 478887 98866 567889998866765 46678998 99863 4588899865443
No 53
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.38 E-value=0.15 Score=34.53 Aligned_cols=48 Identities=21% Similarity=0.466 Sum_probs=28.8
Q ss_pred CCccceecCCCCCccchHHH--hhhh-----hhcccCCC-cccccccccccccchh
Q 027681 39 DDVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFE-MKNAVCPLCAANLGKD 86 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~--Lc~H-----~~eeH~~e-~k~vVCPVCa~~vg~D 86 (220)
+++...+.||.|.+.+.... -|-| |...+-.. .....||+|...+..+
T Consensus 15 ~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred HhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 45667899999977555321 2333 33322221 3456899999887543
No 54
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.16 E-value=0.26 Score=29.74 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=25.6
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG-TSC-SSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999998664 5678888765 643 466789998
No 55
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=89.10 E-value=0.25 Score=36.88 Aligned_cols=47 Identities=23% Similarity=0.468 Sum_probs=36.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccC--CCccccccccccccc--chhHhhh
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHC--FEMKNAVCPLCAANL--GKDAAEH 90 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~--~e~k~vVCPVCa~~v--g~D~i~H 90 (220)
.|.|+.|+..| ....|..|+...|. ...++-.|++|...- ..++..|
T Consensus 18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H 69 (102)
T 2ghf_A 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 69 (102)
T ss_dssp SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTH
T ss_pred CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHH
Confidence 59999999866 46778999876675 335678999999863 5578888
No 56
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.08 E-value=0.26 Score=29.54 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=25.5
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQKC-HTGE-RHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHHH-HSCC-SSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 599999988554 5778889754 6543 66789988
No 57
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.01 E-value=0.29 Score=29.43 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=25.7
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCC-CCCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCC-CCCCCCCCC
Confidence 599999998654 5678889765 654 366789988
No 58
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.00 E-value=0.26 Score=29.53 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRI-HTGV-KPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGG-GSCC-CSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 59999998855 45678888754 6544 66789998
No 59
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.94 E-value=0.3 Score=29.37 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=25.6
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQI-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-TSSC-CSCCSCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCCC
Confidence 59999998855 45678889764 6543 66789988
No 60
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=88.86 E-value=0.27 Score=32.58 Aligned_cols=50 Identities=18% Similarity=0.310 Sum_probs=31.0
Q ss_pred ecC--CCCCccc-hHHHhhhhhhcccCCCcccccccc--ccccc--chhHhhhhhhhcc
Q 027681 45 FPC--PFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 45 F~C--PfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--g~D~i~Hit~QH~ 96 (220)
|.| +.|+..| ....|..|+.. |.. .++-.|++ |.... ..++..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHH-hCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 667 6687755 35667777654 433 24567877 77653 4467777766555
No 61
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=88.74 E-value=0.19 Score=30.27 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=26.3
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCA 80 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa 80 (220)
.|.|+.|+..| ....|..|+.. |.- .+.-.||+|.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~-H~~-~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRS-HDG-SVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHH-HSC-CCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHH-ccC-CCCCCCcCCC
Confidence 58999998865 56778888766 544 4567899983
No 62
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=88.74 E-value=0.23 Score=38.10 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=31.9
Q ss_pred ceecCCCCCccc-hHHHhhhhhhcccCCCcccccccccccc--cchhHhhhhhh
Q 027681 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMV 93 (220)
Q Consensus 43 ~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~--vg~D~i~Hit~ 93 (220)
-.|.|+.|+..| ....|..|+.. |.- .++-.|++|... -..++..|+.+
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNI-HSW-EKKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHH-HHC-CSCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHHH-cCC-CCCeeCCccCeecccccchhhhccc
Confidence 458888887754 45667778753 643 345678888775 34467777754
No 63
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.55 E-value=0.31 Score=29.32 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=25.5
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|++|+..|. ...|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKI-HTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-TSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999998654 5678888765 654 466789988
No 64
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.35 E-value=0.27 Score=29.54 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=25.4
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|- ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999988554 5678888765 654 366789988
No 65
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.34 E-value=0.34 Score=29.10 Aligned_cols=34 Identities=18% Similarity=0.033 Sum_probs=25.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTT-TTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999988654 5678888764 644 366789988
No 66
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.31 E-value=0.17 Score=30.47 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=25.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHC-SSCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 599999998554 4678888764 654 366789988
No 67
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=88.30 E-value=0.24 Score=38.38 Aligned_cols=51 Identities=18% Similarity=0.382 Sum_probs=34.7
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+...+. .+.-.|++|...- ..++..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 48889998755 45668888765332 3456788888863 4478888866554
No 68
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=88.29 E-value=0.24 Score=29.91 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|- ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 499999988554 5668888765 654 367789988
No 69
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=88.24 E-value=0.21 Score=37.38 Aligned_cols=45 Identities=24% Similarity=0.545 Sum_probs=29.8
Q ss_pred CccCccccCCC-ccceecCCCCCc--cchHHHhhhhhhcccCCCccccccccccccc
Q 027681 30 SIVDETEIDDD-VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 30 ~~~de~e~ddd-~r~~F~CPfC~e--d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
+.++|++-|++ ....|+|| |+. .+....|-.. .--+.||-|+-.+
T Consensus 15 v~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I 62 (83)
T 1wge_A 15 VEIEDFQYDEDSETYFYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLII 62 (83)
T ss_dssp EEGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEE
T ss_pred EEHHHceEccCCCEEEEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEE
Confidence 34567765433 45689999 975 6666666432 1258899999875
No 70
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=88.23 E-value=0.31 Score=32.86 Aligned_cols=51 Identities=20% Similarity=0.482 Sum_probs=37.2
Q ss_pred eecCCC--CCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.||+ |+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...++
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred ceECCCCCCCCccCCHHHHHHHHHH-hCC-CCCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 589995 98866 46778899875 432 3567999999874 4588899865544
No 71
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.21 E-value=0.28 Score=29.51 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=25.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGG-GSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999998654 4678888754 654 356789988
No 72
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=88.11 E-value=0.4 Score=28.68 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=25.7
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999998654 5778889765 654 356789988
No 73
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=88.08 E-value=0.36 Score=32.44 Aligned_cols=21 Identities=19% Similarity=0.531 Sum_probs=9.4
Q ss_pred eecCCC--CCccc-hHHHhhhhhh
Q 027681 44 CFPCPF--CYLEI-EAHMICSHLQ 64 (220)
Q Consensus 44 ~F~CPf--C~ed~-D~~~Lc~H~~ 64 (220)
.|.|++ |+..| ....|..|+.
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~ 28 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLR 28 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHT
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHH
Confidence 345555 54433 2334444444
No 74
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.93 E-value=0.42 Score=28.77 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=25.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 48999998855 45778889765 654 366789988
No 75
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=87.90 E-value=0.49 Score=31.77 Aligned_cols=48 Identities=17% Similarity=0.423 Sum_probs=35.0
Q ss_pred ceecCCC--CCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhh
Q 027681 43 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFM 92 (220)
Q Consensus 43 ~~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit 92 (220)
..|.||+ |+..| ....|..|+.. |..+ +.-.|++|.... ..++..|+.
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~ 86 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYRK-HTGH-RPFQCQKCDRAFSRSDHLALHMK 86 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHH-HHCC-CCEECSSSSCEESSHHHHHHHGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHHH-cCCC-CCccCCCCCcccCCHHHHHHHHH
Confidence 3599986 98866 56778899864 5443 567899999863 457888874
No 76
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.84 E-value=0.39 Score=28.94 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=25.8
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSC-SCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999999865 55778889755 644 456789998
No 77
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=87.82 E-value=0.31 Score=31.98 Aligned_cols=47 Identities=21% Similarity=0.512 Sum_probs=34.3
Q ss_pred eecCCC--CCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhh
Q 027681 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFM 92 (220)
Q Consensus 44 ~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit 92 (220)
.|.||+ |+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+.
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHH-HHC-CCCEECTTTCCEESCHHHHHHHHT
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHh-hCC-CCCeECCCCCchhCCHHHHHHHHH
Confidence 599996 98855 45678889765 543 3557899999874 457888874
No 78
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.69 E-value=0.35 Score=28.97 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.1
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 48999998855 45678888765 654 356789988
No 79
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.50 E-value=0.43 Score=28.51 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=25.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 59999999865 45778889864 654 356789988
No 80
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.48 E-value=0.39 Score=28.80 Aligned_cols=34 Identities=21% Similarity=0.132 Sum_probs=25.7
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999998855 45778889765 654 366789988
No 81
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=87.47 E-value=0.22 Score=37.85 Aligned_cols=46 Identities=22% Similarity=0.496 Sum_probs=30.3
Q ss_pred CccCccccCC-CccceecCCCCCc--cchHHHhhhhhhcccCCCcccccccccccccc
Q 027681 30 SIVDETEIDD-DVKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLG 84 (220)
Q Consensus 30 ~~~de~e~dd-d~r~~F~CPfC~e--d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg 84 (220)
+.++|++-|+ +...+|+|| |+. .+....|-.. .--+.||-|+-.+-
T Consensus 8 V~LeDm~~de~~~~y~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~Ik 56 (89)
T 2jr7_A 8 VEIEDFQYDEDSETYFYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIK 56 (89)
T ss_dssp EETTTSEEETTTTEEEEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEE
T ss_pred EEHHHcEEcCCCCEEEEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 3456665433 345689999 975 6666667532 12588999999753
No 82
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=87.43 E-value=0.54 Score=34.87 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=28.9
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCC-Ccccccccccc-----cc--cchhHhhhhhhhc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCF-EMKNAVCPLCA-----AN--LGKDAAEHFMVQH 95 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~-e~k~vVCPVCa-----~~--vg~D~i~Hit~QH 95 (220)
.|.|+.|+..| ....|..|+...|.. +.+.-+|++|. .. -...+..|+...+
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~ 63 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcC
Confidence 46777777654 456677777764432 23455666533 22 2335666665443
No 83
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=87.39 E-value=0.35 Score=32.02 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=35.6
Q ss_pred eecCCC--CCccc-hHHHhhhhhhcccCCCcccccccc---cccc--cchhHhhhhhhhc
Q 027681 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL---CAAN--LGKDAAEHFMVQH 95 (220)
Q Consensus 44 ~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV---Ca~~--vg~D~i~Hit~QH 95 (220)
.|.||+ |++.| ....|..|+...+. -.|++ |... -..++..|+...|
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 499999 98855 57788999877544 67999 9886 3558888986554
No 84
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.36 E-value=0.31 Score=29.26 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=25.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTGE-KPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSCC-CCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999988554 4667888765 6543 66789988
No 85
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.33 E-value=0.37 Score=28.85 Aligned_cols=34 Identities=15% Similarity=0.032 Sum_probs=25.3
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRV-HMG-EKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTT-TCC-SCSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999998866 45678888754 654 356789988
No 86
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.32 E-value=0.44 Score=28.48 Aligned_cols=34 Identities=18% Similarity=0.124 Sum_probs=25.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 499999988554 5678889765 654 366789988
No 87
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=87.29 E-value=0.48 Score=36.68 Aligned_cols=52 Identities=19% Similarity=0.341 Sum_probs=29.7
Q ss_pred eecCC--CCCcc-chHHHhhhhhhcccCCCcccccc--ccccccc--chhHhhhhhhhc
Q 027681 44 CFPCP--FCYLE-IEAHMICSHLQEEHCFEMKNAVC--PLCAANL--GKDAAEHFMVQH 95 (220)
Q Consensus 44 ~F~CP--fC~ed-~D~~~Lc~H~~eeH~~e~k~vVC--PVCa~~v--g~D~i~Hit~QH 95 (220)
.|.|+ .|+.. .....|..|+...|....+.-.| ++|.... ..++..|+.+.+
T Consensus 72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 130 (190)
T 1tf6_A 72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130 (190)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGS
T ss_pred ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhC
Confidence 36666 66653 34556666666666555555666 6666642 335666665433
No 88
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.21 E-value=0.34 Score=28.98 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=25.5
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|- ...|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 499999988654 5778888765 654 366789988
No 89
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.85 E-value=0.31 Score=29.30 Aligned_cols=34 Identities=18% Similarity=0.222 Sum_probs=25.6
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~C 46 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH-HSSC-CCSSSCCC
T ss_pred CeECCCCCcccCchHHHHHHHHH-cCCC-CCCCCCCC
Confidence 599999988554 5678889775 6543 66789988
No 90
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.79 E-value=0.29 Score=29.41 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=25.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HTG-YRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HTC-CCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cCC-CCCCCCCCC
Confidence 499999988654 4668888654 654 356789988
No 91
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.75 E-value=0.5 Score=28.33 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 59999998855 45778889764 654 366789988
No 92
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=86.63 E-value=0.27 Score=33.77 Aligned_cols=49 Identities=14% Similarity=0.288 Sum_probs=28.5
Q ss_pred cCCCccceecCCCCCccchHHH--hhhhhhcccCC----Ccccccccccccccch
Q 027681 37 IDDDVKACFPCPFCYLEIEAHM--ICSHLQEEHCF----EMKNAVCPLCAANLGK 85 (220)
Q Consensus 37 ~ddd~r~~F~CPfC~ed~D~~~--Lc~H~~eeH~~----e~k~vVCPVCa~~vg~ 85 (220)
|++++..+|.||.|.+.+.... -|-|.-...+. +.....||+|...+..
T Consensus 1 g~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 1 GSPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp CCCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred CCcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 4566788999999976554321 13332111111 2236789999988653
No 93
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=86.39 E-value=0.31 Score=33.30 Aligned_cols=47 Identities=21% Similarity=0.531 Sum_probs=28.5
Q ss_pred CCccceecCCCCCccchHHH-h-hhh-----hhcccCCC-----cccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEAHM-I-CSH-----LQEEHCFE-----MKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~-L-c~H-----~~eeH~~e-----~k~vVCPVCa~~vg~ 85 (220)
+++...+.||.|.+.+.... | |-| |-.++-.. .....||+|...+..
T Consensus 7 ~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 7 GNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred hhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 45666889999977555431 1 333 33333222 236789999998764
No 94
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=86.37 E-value=0.4 Score=37.14 Aligned_cols=51 Identities=18% Similarity=0.346 Sum_probs=38.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.||.|+..| ....|..|+...+. .+.-.|++|.... ..++..|+...++
T Consensus 77 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 130 (190)
T 2i13_A 77 PYKCPECGKSFSQRANLRAHQRTHTG--EKPYACPECGKSFSQLAHLRAHQRTHTG 130 (190)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHHHHHHC
T ss_pred CccCcccCCccCCHHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhCC
Confidence 59999998865 56788999876442 3557899999874 4578899876655
No 95
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.34 E-value=0.65 Score=27.90 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=25.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRV-HMG-EKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGG-GGS-CCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 599999988654 5678888764 643 456789988
No 96
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.21 E-value=0.58 Score=28.04 Aligned_cols=34 Identities=15% Similarity=0.051 Sum_probs=25.4
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GTT-CCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999988554 5678889765 643 466789988
No 97
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=86.19 E-value=0.39 Score=28.93 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=25.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HSC-CSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 589999988554 5678888765 543 466789988
No 98
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.17 E-value=0.36 Score=29.17 Aligned_cols=34 Identities=12% Similarity=0.069 Sum_probs=24.9
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|- ...|..|+.. |.-+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTGQ-RPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHSC-CCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 489999988554 5678888765 5443 56789988
No 99
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.84 E-value=0.45 Score=28.56 Aligned_cols=34 Identities=12% Similarity=0.046 Sum_probs=25.6
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 599999998654 5678889765 654 456789988
No 100
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.78 E-value=0.58 Score=28.04 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=24.8
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|++.|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TTT-SCCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 599999988554 5678888764 654 356789886
No 101
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=85.73 E-value=0.3 Score=36.50 Aligned_cols=45 Identities=24% Similarity=0.535 Sum_probs=29.9
Q ss_pred CccCccccCCC-ccceecCCCCCc--cchHHHhhhhhhcccCCCccccccccccccc
Q 027681 30 SIVDETEIDDD-VKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 30 ~~~de~e~ddd-~r~~F~CPfC~e--d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
+.++|++-|++ ..-.|+|| |+. .+....|... ---+.||-|+-.+
T Consensus 8 v~leDm~~de~~~~y~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I 55 (83)
T 1yop_A 8 IEIEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMI 55 (83)
T ss_dssp CBGGGSEEETTTTEEEEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEE
T ss_pred EEHHHcEEcCCCCEEEEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEE
Confidence 45667754433 35689999 975 6666677432 2357899999975
No 102
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.51 E-value=0.3 Score=34.81 Aligned_cols=54 Identities=9% Similarity=-0.018 Sum_probs=38.8
Q ss_pred ccceecCCCCCccc---hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 41 VKACFPCPFCYLEI---EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 41 ~r~~F~CPfC~ed~---D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.+..+.|+.|+..| ....|..|+.. |.- .++-.|++|...- ..++..|+...|.
T Consensus 47 ~~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~ 105 (115)
T 2dmi_A 47 DDNHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTKH 105 (115)
T ss_dssp CSCCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred cCCCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhCC
Confidence 34456799998876 66788888765 543 3567899999874 4588889855443
No 103
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=85.47 E-value=0.62 Score=32.82 Aligned_cols=50 Identities=16% Similarity=0.400 Sum_probs=37.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.| .|+..| ....|..|+.. |.. .+.-.|++|.... ..++..|+...++
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 62 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSM-HLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTG 62 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHH-HSC-CCSEECTTTSCEESSSHHHHHHHTTTCC
T ss_pred CEec-cCCCccCCHHHHHHHHHH-cCC-CcCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 5899 898865 56789999886 433 3567999999874 4588999866554
No 104
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=85.44 E-value=0.77 Score=32.82 Aligned_cols=51 Identities=18% Similarity=0.305 Sum_probs=37.2
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccc--ccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++ |.... ..++..|+...++
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQLV-HTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGGG-TSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 58999998865 56788899875 433 35578987 98863 4588889866554
No 105
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.44 E-value=0.39 Score=28.91 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=25.0
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HFR-EKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHS-TTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 599999998654 5668888765 543 356789988
No 106
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=85.38 E-value=0.52 Score=33.26 Aligned_cols=47 Identities=19% Similarity=0.478 Sum_probs=22.3
Q ss_pred ecCCC--CCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhh
Q 027681 45 FPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMV 93 (220)
Q Consensus 45 F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~ 93 (220)
|.|++ |+..| ....|..|+.. |. ..+.-.|++|.... ..++..|+.+
T Consensus 37 ~~C~~~~C~~~f~~~~~l~~H~~~-h~-~~~~~~C~~C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 37 YQCDFKDCERRFSRSDQLKRHQRR-HT-GVKPFQCKTCQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHH-HH-CCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred ccCCCCCCcCccCCHHHHHHHHHH-cC-CCCCccCCccCchhCCHHHHHHHHHH
Confidence 55653 65533 34455555554 22 12334566665542 3355555543
No 107
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.11 E-value=0.52 Score=28.14 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=25.2
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|++.|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSC-CCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999988654 5678888765 644 456789988
No 108
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.05 E-value=0.35 Score=29.03 Aligned_cols=34 Identities=15% Similarity=0.100 Sum_probs=24.7
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|- ...|..|... |.-+ ++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRRV-HTGG-KPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTHH-HHSC-CCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHHh-cCCC-CCCCCCCC
Confidence 599999988554 5678888764 5443 56789988
No 109
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=84.92 E-value=0.46 Score=31.06 Aligned_cols=36 Identities=17% Similarity=0.387 Sum_probs=25.4
Q ss_pred eecCCCCCccchHHHhhhhhhcccCCCccccccccccccc
Q 027681 44 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 44 ~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
.|.||.|+..|....-.. ..|.- .++-.|++|....
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f 49 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEV 49 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBC
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCcc
Confidence 599999998776654332 44644 3667999998763
No 110
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=84.70 E-value=0.75 Score=27.51 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=25.0
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 499999988554 4667888765 544 456789988
No 111
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=84.39 E-value=0.79 Score=27.50 Aligned_cols=34 Identities=15% Similarity=0.116 Sum_probs=25.2
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 59999998855 45678888665 654 356789988
No 112
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=84.38 E-value=1.1 Score=30.62 Aligned_cols=50 Identities=18% Similarity=0.432 Sum_probs=36.4
Q ss_pred ceecCCC--CCccc-hHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhhh
Q 027681 43 ACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMVQ 94 (220)
Q Consensus 43 ~~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~Q 94 (220)
..|.||+ |+..| ....|..|+.. |.- .+.-.|++|.... ..++..|+.+.
T Consensus 44 ~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H 98 (100)
T 2ebt_A 44 KPYKCTWEGCDWRFARSDELTRHYRK-HTG-AKPFQCGVCNRSFSRSDHLALHMKRH 98 (100)
T ss_dssp CCEECCSSSCCCEESSHHHHHHHHHH-HTS-CCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred CCeeCCCCCCCCccCCHHHHHHHHHH-hCC-CCCeECCCCcCccCCHHHHHHHHHHh
Confidence 3599986 98855 56788899865 443 3567899999863 45888888543
No 113
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=84.33 E-value=0.77 Score=32.92 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=28.0
Q ss_pred CCccceecCCCCCc------------cchHHHhhhhhhcccCCCcccccccccccccch
Q 027681 39 DDVKACFPCPFCYL------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~e------------d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
.++..+|.||-|.+ .|+...+..|+.. +..||+|...+..
T Consensus 9 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 9 SDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQMLTE 60 (85)
T ss_dssp TTCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCCG
T ss_pred hcCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCCCh
Confidence 45677899988643 4566666666653 4689999988654
No 114
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=84.01 E-value=0.4 Score=32.91 Aligned_cols=48 Identities=25% Similarity=0.665 Sum_probs=30.0
Q ss_pred CCCccceecCCCCCccchHHH-----hhhhhhcccCCCc---ccccccccccccch
Q 027681 38 DDDVKACFPCPFCYLEIEAHM-----ICSHLQEEHCFEM---KNAVCPLCAANLGK 85 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed~D~~~-----Lc~H~~eeH~~e~---k~vVCPVCa~~vg~ 85 (220)
+++....+.||.|.+.|+... -|-|.-=.++... +...||+|...+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 9 EEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp CTTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred cccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 344556788999987765331 3666543344421 34689999887654
No 115
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.39 E-value=0.46 Score=28.57 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=24.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..| ....|..|+.. |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWIT-HTR-EKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTH-HHH-CCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 48999998855 45678888765 543 355689988
No 116
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.15 E-value=0.75 Score=27.25 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=25.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.. .++-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HAE-EKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HTS-SCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999988554 5678888765 543 356789888
No 117
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.13 E-value=0.61 Score=27.93 Aligned_cols=34 Identities=15% Similarity=0.048 Sum_probs=24.8
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|- ...|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HHC-CSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 499999988554 5678888765 543 356789988
No 118
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.00 E-value=0.72 Score=27.67 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=24.6
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|++|+..|. ...|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 589999988554 5678888765 543 356788886
No 119
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.89 E-value=0.5 Score=30.29 Aligned_cols=19 Identities=11% Similarity=0.377 Sum_probs=13.3
Q ss_pred CCCccceecCCCCCccchH
Q 027681 38 DDDVKACFPCPFCYLEIEA 56 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed~D~ 56 (220)
.+++...+.||.|.+.+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~ 27 (58)
T 2ecj_A 9 LENLQVEASCSVCLEYLKE 27 (58)
T ss_dssp SSCSCCCCBCSSSCCBCSS
T ss_pred hhccccCCCCccCCcccCc
Confidence 3456667889999775554
No 120
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.66 E-value=0.21 Score=34.75 Aligned_cols=48 Identities=21% Similarity=0.454 Sum_probs=27.3
Q ss_pred cCCCccceecCCCCCccchHHH--hhhhhhcccCCC---cccccccccccccc
Q 027681 37 IDDDVKACFPCPFCYLEIEAHM--ICSHLQEEHCFE---MKNAVCPLCAANLG 84 (220)
Q Consensus 37 ~ddd~r~~F~CPfC~ed~D~~~--Lc~H~~eeH~~e---~k~vVCPVCa~~vg 84 (220)
++++....+.||.|.+.+.... -|-|.--..+.. .+...||+|...+.
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 8 GSEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CSSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CcccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 3455666899999977554332 133321111111 13568999999875
No 121
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=81.83 E-value=0.15 Score=36.22 Aligned_cols=46 Identities=24% Similarity=0.494 Sum_probs=28.2
Q ss_pred CCCccceecCCCCCccchHH-Hh--hhh-----hhcccCCCccccccccccccc
Q 027681 38 DDDVKACFPCPFCYLEIEAH-MI--CSH-----LQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed~D~~-~L--c~H-----~~eeH~~e~k~vVCPVCa~~v 83 (220)
++++...+.||-|.+.|... .| |-| |-.++-.......||+|...+
T Consensus 7 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 7 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 45677789999997754422 22 344 333332233446899999885
No 122
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=81.74 E-value=1.6 Score=32.35 Aligned_cols=40 Identities=20% Similarity=0.287 Sum_probs=27.4
Q ss_pred CCccceecCCCCCc------------cchHHHhhhhhhcccCCCcccccccccccccch
Q 027681 39 DDVKACFPCPFCYL------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~e------------d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
.++..+|.||-|.+ .|+...+..|+.. +..||+|...+..
T Consensus 24 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~~ 75 (100)
T 2kre_A 24 SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTLTE 75 (100)
T ss_dssp SSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBCCT
T ss_pred ccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCCCh
Confidence 45677999998754 3555555555542 4689999998654
No 123
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=81.58 E-value=0.25 Score=33.80 Aligned_cols=47 Identities=19% Similarity=0.421 Sum_probs=27.5
Q ss_pred CCccceecCCCCCccchHHH--hhhhh-----hcccCC----Ccccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEAHM--ICSHL-----QEEHCF----EMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~--Lc~H~-----~eeH~~----e~k~vVCPVCa~~vg~ 85 (220)
+++...+.||.|.+.+.... -|-|. -..+-. +.....||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 14 EMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred HhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 44566789999977554321 24342 222111 1236789999988764
No 124
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=81.32 E-value=0.84 Score=24.26 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=17.7
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCC
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCF 69 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~ 69 (220)
.|.|+.|+..| ....|..|+...|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccC
Confidence 37899998766 446777885555643
No 125
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.30 E-value=0.84 Score=30.41 Aligned_cols=47 Identities=23% Similarity=0.514 Sum_probs=27.6
Q ss_pred CCccceecCCCCCccchHH--HhhhhhhcccCC----Ccccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEAH--MICSHLQEEHCF----EMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~--~Lc~H~~eeH~~----e~k~vVCPVCa~~vg~ 85 (220)
+++...+.||.|.+.+... .-|-|.-=..+. ...+..||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 10 KTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CSCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred hcCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 4566789999997655432 123332111111 1446789999988765
No 126
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.11 E-value=0.99 Score=26.95 Aligned_cols=34 Identities=18% Similarity=-0.008 Sum_probs=25.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|... |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVL-HMG-QKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HSC-CSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 599999988654 5678888765 543 356789988
No 127
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.77 E-value=0.84 Score=27.36 Aligned_cols=34 Identities=15% Similarity=-0.026 Sum_probs=25.0
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+.|+..|. ...|..|+.. |.- .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRV-HTG-EKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HHC-CCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHH-HcC-CCCCCCCCC
Confidence 599999988554 4678888765 543 356789988
No 128
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.55 E-value=0.29 Score=33.53 Aligned_cols=47 Identities=23% Similarity=0.608 Sum_probs=27.1
Q ss_pred CCccceecCCCCCccchHHH--hhhhhhcccCC---------Ccccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEAHM--ICSHLQEEHCF---------EMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~--Lc~H~~eeH~~---------e~k~vVCPVCa~~vg~ 85 (220)
+++...+.||.|.+.+.... -|-|.-=..+. +.....||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 45666889999977654321 13332111111 1236789999988764
No 129
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=79.05 E-value=1.4 Score=32.60 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=26.3
Q ss_pred CCccceecCCCCCc-------------cchHHHhhhhhhcccCCCcccccccccccccch
Q 027681 39 DDVKACFPCPFCYL-------------EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~e-------------d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
.++..+|.||-|.+ .|+...+..|+.. +..||+|...+..
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPLTM 69 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBCCT
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCCCh
Confidence 45677999998754 2444444444442 4689999998654
No 130
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=79.02 E-value=1.7 Score=29.69 Aligned_cols=46 Identities=20% Similarity=0.261 Sum_probs=32.6
Q ss_pred CCccch-HHHhhhhhhcccCCCc-----cccccc--ccccc--cchhHhhhhhhhc
Q 027681 50 CYLEIE-AHMICSHLQEEHCFEM-----KNAVCP--LCAAN--LGKDAAEHFMVQH 95 (220)
Q Consensus 50 C~ed~D-~~~Lc~H~~eeH~~e~-----k~vVCP--VCa~~--vg~D~i~Hit~QH 95 (220)
|.+.|+ ...|+.|+.++|-... .+-+|. -|... ....++.||+..|
T Consensus 9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 777554 4569999998896543 356776 67664 3458999997766
No 131
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=78.30 E-value=1.8 Score=33.38 Aligned_cols=51 Identities=18% Similarity=0.304 Sum_probs=37.3
Q ss_pred eecC--CCCCccc-hHHHhhhhhhcccCCCcccccccc--ccccc--chhHhhhhhhhcc
Q 027681 44 CFPC--PFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~C--PfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--g~D~i~Hit~QH~ 96 (220)
.|.| +.|+..| ....|..|+.. |.- .++-.||+ |...- ..++..|+.+.++
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGG-GSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 5889 7798744 56788899875 543 35678988 99874 4588999976555
No 132
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=78.16 E-value=0.8 Score=32.73 Aligned_cols=43 Identities=21% Similarity=0.522 Sum_probs=26.2
Q ss_pred cceecCCCCCccchHH---Hh---hhh-----hhcccCCCcccccccccccccch
Q 027681 42 KACFPCPFCYLEIEAH---MI---CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 42 r~~F~CPfC~ed~D~~---~L---c~H-----~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
..++.||-|.+.++.. .+ |-| |-... .+..+..||+|...+..
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~-~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRI-RTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHH-TTSSCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHH-HhcCCCCCCCCCCccCC
Confidence 3467899998877543 21 444 22211 12246789999988764
No 133
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.08 E-value=0.81 Score=30.13 Aligned_cols=18 Identities=17% Similarity=0.501 Sum_probs=13.3
Q ss_pred CCCccceecCCCCCccch
Q 027681 38 DDDVKACFPCPFCYLEIE 55 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed~D 55 (220)
.+++...+.||.|.+.+.
T Consensus 14 ~~~~~~~~~C~IC~~~~~ 31 (63)
T 2ysj_A 14 VNKLQEEVICPICLDILQ 31 (63)
T ss_dssp CCCCCCCCBCTTTCSBCS
T ss_pred HHhCccCCCCCcCCchhC
Confidence 345677899999977554
No 134
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=78.05 E-value=1.9 Score=32.03 Aligned_cols=51 Identities=18% Similarity=0.269 Sum_probs=36.7
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccc--ccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--g~D~i~Hit~QH~ 96 (220)
.|.|+.|+..| ....|..|+.. |.. .+.-.|++ |.... ..++..|+...++
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~ 117 (155)
T 2rpc_A 62 WEECPREGKSFKAKYKLVNHIRV-HTG-EKPFPCPFPGCGKIFARSENLKIHKRTHTG 117 (155)
T ss_dssp BTTCTTSSCCCSSHHHHHHHTHH-HHC-CCSEECSCTTTCCEESCHHHHHHHHTTTCS
T ss_pred ccCCCCcccccCCHHHHHHHHHh-cCC-CCcccCCcCCCCCccCCHHHHHHHHHhhCC
Confidence 38899998855 46678889876 432 35678988 98864 4588889866554
No 135
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.00 E-value=0.12 Score=33.46 Aligned_cols=42 Identities=14% Similarity=0.185 Sum_probs=27.6
Q ss_pred eecCCCCCccchHHHhhhhhhcccCCCccccccccccccc--chhHhhhhhh
Q 027681 44 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL--GKDAAEHFMV 93 (220)
Q Consensus 44 ~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v--g~D~i~Hit~ 93 (220)
.|.|+.|+..|.......- .+.-.|++|.... ..++..|+..
T Consensus 18 ~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~ 61 (73)
T 2ctu_A 18 SQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGN 61 (73)
T ss_dssp EEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSC
T ss_pred CeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHh
Confidence 5999999886654332221 4567899998763 3466777644
No 136
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=77.08 E-value=1.4 Score=34.75 Aligned_cols=31 Identities=32% Similarity=0.494 Sum_probs=26.2
Q ss_pred ceecCCCCCc-cchHHHhhhhhhcccCCCccc
Q 027681 43 ACFPCPFCYL-EIEAHMICSHLQEEHCFEMKN 73 (220)
Q Consensus 43 ~~F~CPfC~e-d~D~~~Lc~H~~eeH~~e~k~ 73 (220)
..+.|=||.+ -=+...+..||.+.|-|+-..
T Consensus 14 ~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 4699999987 458999999999999997554
No 137
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=76.98 E-value=1.3 Score=33.76 Aligned_cols=52 Identities=19% Similarity=0.317 Sum_probs=40.3
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccccccc--cchhHhhhhhhhccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN--LGKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~--vg~D~i~Hit~QH~~ 97 (220)
.|.|++|+..| ....|..|... |.- .++-.|++|... -..++..|+...|+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEIH-HTG-ERRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HHT-CCCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhccc-cCC-CccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 59999999866 45678899764 654 356799999987 455899999888864
No 138
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.74 E-value=0.66 Score=30.60 Aligned_cols=46 Identities=20% Similarity=0.548 Sum_probs=26.8
Q ss_pred CCccceecCCCCCccchHH---------HhhhhhhcccCCC---cccccccccccccc
Q 027681 39 DDVKACFPCPFCYLEIEAH---------MICSHLQEEHCFE---MKNAVCPLCAANLG 84 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~---------~Lc~H~~eeH~~e---~k~vVCPVCa~~vg 84 (220)
+.....+.||-|.+.+... .-|-|.-=..+.+ .+...||+|...+.
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 10 LRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp CCTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred cCCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 3445578899998887754 1244432111221 12458999987754
No 139
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=76.38 E-value=1.8 Score=30.35 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=37.7
Q ss_pred eecCCC--CCccc-hHHHhhhhhhcccCCCccccccc--cccccc--chhHhhhhhhhcc
Q 027681 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCP--LCAANL--GKDAAEHFMVQHA 96 (220)
Q Consensus 44 ~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCP--VCa~~v--g~D~i~Hit~QH~ 96 (220)
.|.|++ |+..| ....|..|+.. |.. .+.-.|+ +|.... ..++..|+...++
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 63 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRK-HTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHH-HHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHh-hCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence 589998 98855 57789999885 433 3567899 798863 5588999866544
No 140
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=76.28 E-value=1.4 Score=29.54 Aligned_cols=34 Identities=21% Similarity=0.563 Sum_probs=20.4
Q ss_pred eecCCCCCccchHHHhhhhhhcccCCCcccc--cccccccc
Q 027681 44 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNA--VCPLCAAN 82 (220)
Q Consensus 44 ~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~v--VCPVCa~~ 82 (220)
.|.|+.|+--+|...= +..+++.-+- +||+|.+.
T Consensus 4 ~y~C~vCGyvyd~~~G-----d~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEH-----DNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGG-----TTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcC-----CCcchhhCCCCCcCcCCCCc
Confidence 5788888765553210 0055655444 88888864
No 141
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=75.82 E-value=0.29 Score=32.85 Aligned_cols=47 Identities=23% Similarity=0.665 Sum_probs=25.4
Q ss_pred CCccceecCCCCCccchH----H-HhhhhhhcccCCC---cccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEA----H-MICSHLQEEHCFE---MKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~----~-~Lc~H~~eeH~~e---~k~vVCPVCa~~vg~ 85 (220)
++......||-|.+.|+. . --|.|.-=.++.. .++..||+|...+..
T Consensus 9 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 9 TEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp CSTTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred CcCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 344557789999776642 1 1244431111111 123469999887654
No 142
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.76 E-value=1.8 Score=25.78 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=21.8
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGI-HTGE-KPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTT-TSCS-CCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhHh-cCCC-CCCCCCC
Confidence 488999988554 4567788654 6443 5566764
No 143
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=75.39 E-value=1.5 Score=31.46 Aligned_cols=29 Identities=24% Similarity=0.568 Sum_probs=24.7
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMK 72 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k 72 (220)
.|.|++|+..| ....|..|+...|+.|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 59999999855 778899999999998764
No 144
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.27 E-value=2 Score=25.51 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=21.9
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGI-HTGE-KPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHTT-TTTS-SCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHHh-hCCC-CCCCCCC
Confidence 488999988554 5667788654 5443 5566764
No 145
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=75.18 E-value=2.2 Score=35.38 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=30.3
Q ss_pred CCCccceecCCCCC------------ccchHHHhhhhhhcccCCCcccccccccccccch
Q 027681 38 DDDVKACFPCPFCY------------LEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 38 ddd~r~~F~CPfC~------------ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
+.+++..|.||-|. -.|+...+..|+...+ ..||+|...+..
T Consensus 100 ~~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~------~tcP~t~~~l~~ 153 (179)
T 2f42_A 100 KREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG------HFDPVTRSPLTQ 153 (179)
T ss_dssp CCCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC------SBCTTTCCBCCG
T ss_pred ccCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC------CCCCCCcCCCCh
Confidence 45678899999864 3577777777776521 169999988654
No 146
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=75.15 E-value=0.54 Score=32.35 Aligned_cols=46 Identities=24% Similarity=0.499 Sum_probs=26.2
Q ss_pred cCCCccceecCCCCCccchHHH-h--hhhh-----hcccCCCcccccccccccc
Q 027681 37 IDDDVKACFPCPFCYLEIEAHM-I--CSHL-----QEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 37 ~ddd~r~~F~CPfC~ed~D~~~-L--c~H~-----~eeH~~e~k~vVCPVCa~~ 82 (220)
..+++...+.||.|.+.|.... | |-|. ...+-.......||+|...
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 8 EDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CCCCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred ccccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 3456778899999977554432 2 3342 1111111223589999886
No 147
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.34 E-value=2.1 Score=29.49 Aligned_cols=48 Identities=21% Similarity=0.603 Sum_probs=27.5
Q ss_pred CCccceecCCCCCccchH----H-Hh-hhhh-----hcccCCC-cccccccccccccchh
Q 027681 39 DDVKACFPCPFCYLEIEA----H-MI-CSHL-----QEEHCFE-MKNAVCPLCAANLGKD 86 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~----~-~L-c~H~-----~eeH~~e-~k~vVCPVCa~~vg~D 86 (220)
+++...+.||.|.+.|+. . .| |-|. -...-.. .....||+|...+..+
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred hhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 445667889999887765 1 11 3332 1111101 1357899999886654
No 148
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=73.91 E-value=1.9 Score=33.89 Aligned_cols=45 Identities=20% Similarity=0.380 Sum_probs=23.0
Q ss_pred eecCC--CCCccchHHHhhhhhhcccCCCccccccccccccc-chhHhhhh
Q 027681 44 CFPCP--FCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL-GKDAAEHF 91 (220)
Q Consensus 44 ~F~CP--fC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v-g~D~i~Hi 91 (220)
.+.|| .|.+.+....|-.|..+ =. -+.+.||-|...+ -.++..|+
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~~~-C~--~~~v~C~~C~~~~~r~~l~~H~ 129 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQAH-CE--FALMDCPQCQRPFQKFHINIHI 129 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHHTT-CT--TSEEECTTTCCEEEGGGHHHHH
T ss_pred ccCCCCCCCCceecHhHHHHHHhc-CC--ceeeECCCCChHHHHHHHHHHh
Confidence 34564 36666666666666421 11 2345566666643 33555565
No 149
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=73.04 E-value=1.5 Score=29.97 Aligned_cols=16 Identities=25% Similarity=0.607 Sum_probs=10.5
Q ss_pred CCCccceecCCCCCcc
Q 027681 38 DDDVKACFPCPFCYLE 53 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed 53 (220)
|-+.-++..||||+..
T Consensus 17 el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 17 QLKVLPGVRCPYCGYK 32 (48)
T ss_dssp CSCCCSSSCCTTTCCS
T ss_pred HHhhCCCcccCccCcE
Confidence 3445677888888653
No 150
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.97 E-value=2.5 Score=24.98 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=22.2
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..| ....|..|... |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-TSSC-CSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHHh-cCCC-CCcCCCC
Confidence 48999998855 45667788654 6443 5566764
No 151
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=72.59 E-value=1.9 Score=27.29 Aligned_cols=27 Identities=26% Similarity=0.491 Sum_probs=21.6
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCC
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFE 70 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e 70 (220)
-|.||.|-.+| ....|..|-+..|..+
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 59999997644 5677999999999864
No 152
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.73 E-value=2.8 Score=24.84 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=22.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|+.. |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI-HTGE-RPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TSCC-CCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 588999988554 5678888764 5443 5556764
No 153
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.58 E-value=3.5 Score=24.30 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=22.3
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..| ....|..|+.. |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTGE-NPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSSS-CCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48899998865 45677788765 5543 5566764
No 154
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.26 E-value=2.7 Score=24.94 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=22.2
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|++|+..|. ...|..|... |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRGE-KPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCSC-CCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCCC-CCCCCCC
Confidence 489999988554 5677788654 5443 4556764
No 155
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=71.25 E-value=1.6 Score=31.45 Aligned_cols=31 Identities=13% Similarity=0.390 Sum_probs=23.5
Q ss_pred ccceecCCCCCccchHHHhhhhhhcccCCCccccccccccccc
Q 027681 41 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 41 ~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
...+|.|+-|+.+|++. +...+.||-|..++
T Consensus 25 ~~v~Y~C~~CG~~~e~~------------~~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS------------RTDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCC------------TTSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeC------------CCCCccCCCCCceE
Confidence 56789999999887653 23457899998753
No 156
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.12 E-value=1.9 Score=29.09 Aligned_cols=48 Identities=19% Similarity=0.438 Sum_probs=28.0
Q ss_pred cceecCCCCCccchHH-Hh-hhhhhcccCC---CcccccccccccccchhHhh
Q 027681 42 KACFPCPFCYLEIEAH-MI-CSHLQEEHCF---EMKNAVCPLCAANLGKDAAE 89 (220)
Q Consensus 42 r~~F~CPfC~ed~D~~-~L-c~H~~eeH~~---e~k~vVCPVCa~~vg~D~i~ 89 (220)
...+.||.|.+.+... .| |-|.-=..+. -.+...||+|...+..+.+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 65 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLD 65 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHHHHS
T ss_pred CCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHhhcc
Confidence 3467899997754432 12 4443211111 12346899999998876554
No 157
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.08 E-value=3.1 Score=24.63 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=22.0
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|+.. |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGG-GCCC-CCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 488999988554 4667788754 5443 4556764
No 158
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=70.93 E-value=2.1 Score=22.27 Aligned_cols=21 Identities=14% Similarity=0.653 Sum_probs=12.9
Q ss_pred ecCCCCCccch-HHHhhhhhhc
Q 027681 45 FPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 45 F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
|.|+.|+..|. ...|..|...
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKT 24 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHH
Confidence 67777776553 3556666544
No 159
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.06 E-value=2.7 Score=24.95 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=22.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCCC-CCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 489999988554 4667788765 5443 5566764
No 160
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=69.89 E-value=1.3 Score=35.24 Aligned_cols=31 Identities=23% Similarity=0.464 Sum_probs=22.8
Q ss_pred CccceecCCCCCccchHHHhhhhhhcccCCCccccccccccccc
Q 027681 40 DVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
.....|.|+-|+..|+.. .....||.|...+
T Consensus 128 ~~~~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 128 VIKWRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCCCCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred cccEEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 344689999999888643 3345899998764
No 161
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.46 E-value=3.8 Score=24.32 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=21.4
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|+.. |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTTC-CCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 488999987554 4667788654 5433 4556654
No 162
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=69.12 E-value=1.4 Score=33.64 Aligned_cols=13 Identities=38% Similarity=0.766 Sum_probs=11.0
Q ss_pred ceecCCCCCccch
Q 027681 43 ACFPCPFCYLEIE 55 (220)
Q Consensus 43 ~~F~CPfC~ed~D 55 (220)
..|+||-|+|+|-
T Consensus 50 F~FkCP~CgEEFy 62 (95)
T 2k5c_A 50 FVFKCPVCGEEFY 62 (95)
T ss_dssp SEEECTTTCCEEE
T ss_pred HhhcCCCccHHHh
Confidence 4899999999874
No 163
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=68.70 E-value=1.2 Score=37.93 Aligned_cols=53 Identities=13% Similarity=0.209 Sum_probs=34.2
Q ss_pred cceecCCCCCccchHHHhhhhhhcccC-CCcccccccccccccch-hHhhhhhhhccc
Q 027681 42 KACFPCPFCYLEIEAHMICSHLQEEHC-FEMKNAVCPLCAANLGK-DAAEHFMVQHAS 97 (220)
Q Consensus 42 r~~F~CPfC~ed~D~~~Lc~H~~eeH~-~e~k~vVCPVCa~~vg~-D~i~Hit~QH~~ 97 (220)
+-+|.||.|+.++...++.. .... .++.-..||-|...++. -++..++++-|.
T Consensus 20 ~l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~~~~~i~nQl~l~iR~ 74 (206)
T 3flo_B 20 TLELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLFTPLQLTSQIEHSIRA 74 (206)
T ss_dssp CEEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBCCHHHHHHHHHHHHHH
T ss_pred eeEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcCCHHHHHHHHHHHHHH
Confidence 56899999988777777653 1111 34566789999998654 444555444433
No 164
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=68.62 E-value=5.2 Score=25.85 Aligned_cols=49 Identities=16% Similarity=0.311 Sum_probs=35.0
Q ss_pred ccceecCCC--CCccc-hHHHhhhhhhcccCCCcccccccc--ccccc--chhHhhhh
Q 027681 41 VKACFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPL--CAANL--GKDAAEHF 91 (220)
Q Consensus 41 ~r~~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV--Ca~~v--g~D~i~Hi 91 (220)
....|.|++ |+..| ....|..|+.. |.- .+.-.|++ |.... ..++..|+
T Consensus 14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~~C~k~f~~~~~l~~H~ 69 (72)
T 2epa_A 14 RIRSHICSHPGCGKTYFKSSHLKAHTRT-HTG-EKPFSCSWKGCERRFARSDELSRHR 69 (72)
T ss_dssp CCCCEECSSTTTCCEESSHHHHHHHHHH-HSS-SCSEECCCTTCCCEESSHHHHHHHT
T ss_pred ccCceeCCCCCCccccCCHHHHHHHHHh-cCC-CCCccCCCCCCCcccCCHHHHHhHh
Confidence 345799998 98865 46778899865 543 45678976 99874 44777776
No 165
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=68.12 E-value=0.66 Score=29.58 Aligned_cols=39 Identities=28% Similarity=0.824 Sum_probs=20.8
Q ss_pred ecCCCCCccchH----HHh--hhhhhcccCCC---ccccccccccccc
Q 027681 45 FPCPFCYLEIEA----HMI--CSHLQEEHCFE---MKNAVCPLCAANL 83 (220)
Q Consensus 45 F~CPfC~ed~D~----~~L--c~H~~eeH~~e---~k~vVCPVCa~~v 83 (220)
..||-|.++++. ..| |.|.-=.++.. .++..||+|...+
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 458888766544 222 44432222221 2356899998754
No 166
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=67.68 E-value=0.46 Score=35.70 Aligned_cols=45 Identities=24% Similarity=0.603 Sum_probs=26.5
Q ss_pred CccceecCCCCCccchHHH--hhhh-----hhcccCCCcccccccccccccch
Q 027681 40 DVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
++...+.||.|.+.|.... -|-| |-..+- ..+...||+|...++.
T Consensus 48 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 48 KVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSF-RAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHH-HTTCCBCTTTCCBCCT
T ss_pred hCccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHH-hHCcCCCCCCCccCCC
Confidence 4456789999977554322 2333 322221 1344589999988754
No 167
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.58 E-value=4 Score=26.92 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=28.3
Q ss_pred ceecCCCCCccc-hHHHhhhhhhcccCCCcccccccccccc
Q 027681 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 43 ~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
..|.|+.|+..| ....|..|+...|. .+...|++|...
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~~ 84 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGPS 84 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCCC
Confidence 469999998866 56789999887544 345678888653
No 168
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.47 E-value=2 Score=24.26 Aligned_cols=22 Identities=18% Similarity=0.537 Sum_probs=16.8
Q ss_pred eecCCCCCccchH--HHhhhhhhc
Q 027681 44 CFPCPFCYLEIEA--HMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D~--~~Lc~H~~e 65 (220)
.|.|+.|+..|.. ..|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHHh
Confidence 5899999987766 477778643
No 169
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.29 E-value=3.9 Score=24.33 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=21.8
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|+.. |.-+ +.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSGE-RPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTSC-CSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCCC-CCCCCCC
Confidence 588999987554 4667788754 5443 4566764
No 170
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.22 E-value=3.9 Score=24.18 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=21.8
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|++|+..|. ...|..|... |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVI-HTGE-KPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTT-TCCS-CCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 588999988554 4667788764 5433 4556664
No 171
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.97 E-value=2.6 Score=24.87 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=21.7
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|- ...|..|+.. |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT-HSGE-KPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH-HCCC-SCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 488999988554 4667778754 5433 4556764
No 172
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.86 E-value=3 Score=24.77 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=21.6
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-HTSS-CCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 588999987554 4667778654 5433 4556764
No 173
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=66.76 E-value=1.7 Score=32.51 Aligned_cols=36 Identities=19% Similarity=0.606 Sum_probs=21.9
Q ss_pred CccceecCCCCCc-c-chHHHhhhhhhcccCCCcccccccccccc
Q 027681 40 DVKACFPCPFCYL-E-IEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 40 d~r~~F~CPfC~e-d-~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
-+...|.||||+- + +.+ .-......-.+.|-+|...
T Consensus 19 ~L~t~F~CPfCnh~~sV~v-------kidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 19 TLETQFTCPFCNHEKSCDV-------KMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp CCSSCCCCTTTCCSSCEEE-------EEETTTTEEEEEESSSCCE
T ss_pred CCCCeEcCCCCCCCCeEEE-------EEEccCCEEEEEcccCCCe
Confidence 3567999999953 2 222 1222223445779999876
No 174
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.58 E-value=3 Score=24.69 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=22.0
Q ss_pred eecCCCCCccchH-HHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIEA-HMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D~-~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|++|+..|.. ..|..|+.. |.- .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRI-HTG-EKSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTT-TSS-CCCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 5889999886544 567778654 553 35556764
No 175
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=66.28 E-value=3.8 Score=23.66 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=19.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAGE-SGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCCC-CSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCCC-CCCCCC
Confidence 488888887554 4567777654 5433 344454
No 176
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.24 E-value=3.8 Score=24.13 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=21.8
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|+.. |.- .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSS-CCSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 488999988554 4667788754 543 34556764
No 177
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=65.84 E-value=2.9 Score=24.88 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=21.5
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|+.. |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTTS-CSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 488999988554 4667778654 5433 4556764
No 178
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=65.71 E-value=2.9 Score=34.19 Aligned_cols=27 Identities=33% Similarity=0.807 Sum_probs=18.9
Q ss_pred cceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 42 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 42 r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
...|.||-|+.-++- + -+.+||||...
T Consensus 136 ~~~~~C~~CG~i~~~-------------~-~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAVD-------------E-APEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEES-------------C-CCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeCC-------------C-CCCCCCCCCCC
Confidence 358899999875541 1 23499999864
No 179
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.67 E-value=2.3 Score=25.14 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=21.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHSC-CCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHh-cCCC-CCCCCCC
Confidence 488999988554 4667778654 5432 4556765
No 180
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.44 E-value=4.8 Score=23.66 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=21.9
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..| ....|..|... |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTGE-KPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCSS-SSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48999998855 45677788754 5433 4556764
No 181
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=65.17 E-value=0.75 Score=33.08 Aligned_cols=45 Identities=20% Similarity=0.551 Sum_probs=27.8
Q ss_pred CCccceecCCCCCccchHH-Hh--hhhh-----hcccCCCcccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEAH-MI--CSHL-----QEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~-~L--c~H~-----~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
+++...+.||.|.+.+... .+ |-|. -..+-. ....||+|...++.
T Consensus 17 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 17 KTIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLS--YKTQCPTCCVTVTE 69 (99)
T ss_dssp HHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT--TCCBCTTTCCBCCG
T ss_pred HhCCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHH--CCCCCCCCCCcCCh
Confidence 4456688999997765443 33 5552 222211 34689999998764
No 182
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.15 E-value=3.4 Score=27.26 Aligned_cols=29 Identities=31% Similarity=0.608 Sum_probs=23.9
Q ss_pred ceecCCCCCccc-hHHHhhhhhhcccCCCc
Q 027681 43 ACFPCPFCYLEI-EAHMICSHLQEEHCFEM 71 (220)
Q Consensus 43 ~~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~ 71 (220)
..|.|+.|+..| ....|..|+...|..+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 369999999866 56789999999998764
No 183
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=64.94 E-value=6 Score=32.40 Aligned_cols=41 Identities=17% Similarity=0.207 Sum_probs=25.4
Q ss_pred CCccceecCCCCCcc------------chHHHhhhhhhcccCCCcccccccccccccch
Q 027681 39 DDVKACFPCPFCYLE------------IEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed------------~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
.+....|.||-|.+- |+...+..|+... ...||+|...+..
T Consensus 203 ~~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 203 RDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPLTQ 255 (281)
T ss_dssp CCCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCCCG
T ss_pred CCCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCCch
Confidence 456678999988552 3344444444431 2249999998754
No 184
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.81 E-value=5 Score=23.76 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=22.5
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..| ....|..|+.. |.- .++-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSC-CCCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 58999998855 45678888764 543 35566764
No 185
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=64.79 E-value=3.4 Score=26.99 Aligned_cols=37 Identities=19% Similarity=0.484 Sum_probs=28.0
Q ss_pred eecCCC--CCccc-hHHHhhhhhhcccCCCcccccccccccc
Q 027681 44 CFPCPF--CYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 44 ~F~CPf--C~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
.|.|+. |+..| ....|..|+.. |.- .++-.|++|...
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~k~ 77 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKL-HSD-TRDYICEFSGPS 77 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHH-HHT-SCCCSCCSSSCC
T ss_pred CeECCCCCCcCccCCHHHHHHHHHH-hCC-CCCeeCCCCCCC
Confidence 599999 98855 46788899875 543 356799999764
No 186
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=64.59 E-value=3.4 Score=26.99 Aligned_cols=42 Identities=26% Similarity=0.574 Sum_probs=26.4
Q ss_pred ceecCCCCCccchHHH--hhhhhhcccCCCcccccccccccccc
Q 027681 43 ACFPCPFCYLEIEAHM--ICSHLQEEHCFEMKNAVCPLCAANLG 84 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~--Lc~H~~eeH~~e~k~vVCPVCa~~vg 84 (220)
..+.||.|.+.|.... =|-|.-=..+.......||+|...+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 3577999977554332 24454333445556678999988754
No 187
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.51 E-value=4.8 Score=23.84 Aligned_cols=33 Identities=24% Similarity=0.438 Sum_probs=21.8
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..| ....|..|... |..+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQRV-HTGE-KPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHTT-TSSS-CCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCCC-CCCCCCC
Confidence 48899998865 45677788653 6443 4556664
No 188
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.35 E-value=3.2 Score=24.65 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=21.5
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |.- .++-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRS-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HSS-SSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 488999988554 4667778654 543 35556664
No 189
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=63.94 E-value=4.5 Score=25.10 Aligned_cols=28 Identities=21% Similarity=0.542 Sum_probs=22.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEM 71 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~ 71 (220)
.|.|+.|+..| ....|..|+...|.-+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 59999999866 56789999888887653
No 190
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.79 E-value=1.1 Score=30.35 Aligned_cols=45 Identities=22% Similarity=0.542 Sum_probs=24.0
Q ss_pred CccceecCCCCCccchHHH-----hhhhhhcccCCC---cccccccccccccc
Q 027681 40 DVKACFPCPFCYLEIEAHM-----ICSHLQEEHCFE---MKNAVCPLCAANLG 84 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~~-----Lc~H~~eeH~~e---~k~vVCPVCa~~vg 84 (220)
+......||.|.++|.... -|.|.-=.++.. .+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 3444667999977664221 244431111111 12348999987754
No 191
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.40 E-value=4 Score=24.23 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=22.0
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |.-..++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHERI-HTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHTT-CCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence 488999988554 4677788654 544234556664
No 192
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=62.13 E-value=2.4 Score=37.70 Aligned_cols=45 Identities=22% Similarity=0.439 Sum_probs=24.8
Q ss_pred ccceecCCCCCccchHHH---hhhhhhc-----ccCCCcccccccc--cccccch
Q 027681 41 VKACFPCPFCYLEIEAHM---ICSHLQE-----EHCFEMKNAVCPL--CAANLGK 85 (220)
Q Consensus 41 ~r~~F~CPfC~ed~D~~~---Lc~H~~e-----eH~~e~k~vVCPV--Ca~~vg~ 85 (220)
...+|.||.|.+-|.... -|-|.-+ .+--+.....||| |...+..
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 357899999965332221 2333221 1111224478999 9997543
No 193
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.08 E-value=0.85 Score=30.98 Aligned_cols=46 Identities=22% Similarity=0.432 Sum_probs=28.3
Q ss_pred CCCccceecCCCCCccch-HHHh--hhh-----hhcccCCCcccccccccccccch
Q 027681 38 DDDVKACFPCPFCYLEIE-AHMI--CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed~D-~~~L--c~H-----~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
.++++..+.||.|.+.+. ...| |-| |..++- .....||+|...+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 9 LSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHF--YYSNRCPKCNIVVHQ 62 (72)
T ss_dssp CCCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHH--HHCSSCTTTCCCCCS
T ss_pred HhhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHH--HcCCcCCCcCcccCc
Confidence 355677899999977654 3333 444 222221 124689999988754
No 194
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=61.27 E-value=2.8 Score=34.52 Aligned_cols=27 Identities=26% Similarity=0.556 Sum_probs=18.7
Q ss_pred ceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
..+.|+.|+--+|-. + -+-+||+|...
T Consensus 154 ~~~~C~~CG~~~~g~--------~-----~p~~CP~C~~~ 180 (191)
T 1lko_A 154 TKWRCRNCGYVHEGT--------G-----APELCPACAHP 180 (191)
T ss_dssp EEEEETTTCCEEEEE--------E-----CCSBCTTTCCB
T ss_pred ceEEECCCCCEeeCC--------C-----CCCCCCCCcCC
Confidence 479999998766511 1 12299999884
No 195
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.61 E-value=1.1 Score=30.49 Aligned_cols=42 Identities=29% Similarity=0.775 Sum_probs=24.8
Q ss_pred ceecCCCCCccchHH----Hh-hhhhhcccCCCc---ccccccccccccc
Q 027681 43 ACFPCPFCYLEIEAH----MI-CSHLQEEHCFEM---KNAVCPLCAANLG 84 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~----~L-c~H~~eeH~~e~---k~vVCPVCa~~vg 84 (220)
....||-|.++|+.. .| |.|.-=.++... ++..||+|...++
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 356799998766543 12 666432223221 3458999988764
No 196
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=59.58 E-value=0.84 Score=36.13 Aligned_cols=46 Identities=22% Similarity=0.496 Sum_probs=27.1
Q ss_pred CccceecCCCCCccchHHH--hhhh-----hhcccCCCcccccccccccccchh
Q 027681 40 DVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGKD 86 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~vg~D 86 (220)
++...+.||.|.+.|.... -|-| |-..+-. .....||+|...++.+
T Consensus 74 ~l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 74 KLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFK-AQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCCTT
T ss_pred hCccCCEeecCChhhcCCEEcCCCCchhHHHHHHHHH-hCCCcCCCCCccCCCC
Confidence 3556799999976544321 2333 3332221 2345899999987654
No 197
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=59.46 E-value=0.96 Score=32.42 Aligned_cols=43 Identities=26% Similarity=0.649 Sum_probs=24.3
Q ss_pred cceecCCCCCccchHH-----HhhhhhhcccCCC---cccccccccccccc
Q 027681 42 KACFPCPFCYLEIEAH-----MICSHLQEEHCFE---MKNAVCPLCAANLG 84 (220)
Q Consensus 42 r~~F~CPfC~ed~D~~-----~Lc~H~~eeH~~e---~k~vVCPVCa~~vg 84 (220)
.....||-|.++|... --|.|.-=.++.+ .++..||+|...+.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 3467799997766431 1155532222221 13468999988764
No 198
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=58.78 E-value=4.1 Score=21.07 Aligned_cols=21 Identities=19% Similarity=0.494 Sum_probs=13.5
Q ss_pred ecCCCCCccch-HHHhhhhhhc
Q 027681 45 FPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 45 F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
|.|+.|+..|. ...|..|...
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHHH
Confidence 77888877554 3556666543
No 199
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.70 E-value=6.6 Score=22.70 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=19.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTRT-HTGE-SGPSSG 44 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHTT-TCCS-SSSCCC
T ss_pred CeECCCCCCccCCHHHHHHHhhh-cCCC-CCCCCC
Confidence 488888887554 4567777654 5433 334443
No 200
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=58.48 E-value=6.1 Score=20.15 Aligned_cols=20 Identities=15% Similarity=0.494 Sum_probs=12.8
Q ss_pred ecCCCCCccch-HHHhhhhhh
Q 027681 45 FPCPFCYLEIE-AHMICSHLQ 64 (220)
Q Consensus 45 F~CPfC~ed~D-~~~Lc~H~~ 64 (220)
|.|+.|+..|. ...|..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 67888877554 355666654
No 201
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=58.17 E-value=4.5 Score=25.96 Aligned_cols=24 Identities=21% Similarity=0.477 Sum_probs=20.8
Q ss_pred cCCCCCc-cchHHHhhhhhhcccCC
Q 027681 46 PCPFCYL-EIEAHMICSHLQEEHCF 69 (220)
Q Consensus 46 ~CPfC~e-d~D~~~Lc~H~~eeH~~ 69 (220)
-|-||-. .-|+-.|..|+.|.|-.
T Consensus 11 hcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 11 HCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp EETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4999965 88999999999998864
No 202
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.12 E-value=3.8 Score=22.65 Aligned_cols=22 Identities=23% Similarity=0.525 Sum_probs=16.0
Q ss_pred eecCCCCCccchH-HHhhhhhhc
Q 027681 44 CFPCPFCYLEIEA-HMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D~-~~Lc~H~~e 65 (220)
.|.|+.|+..|.. ..|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHH
Confidence 5899999886654 567777643
No 203
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=57.49 E-value=3.9 Score=31.12 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=23.4
Q ss_pred CCccceecCCCCCccchHHHhhhhhhcccCCCcccc-cccccccc
Q 027681 39 DDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNA-VCPLCAAN 82 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~v-VCPVCa~~ 82 (220)
++.+..|.|+-|+..|... .... .||.|...
T Consensus 68 ~~~p~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 68 VDEKVELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp EEECCEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred EeccceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 3566799999999877761 2346 89999876
No 204
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.37 E-value=5.2 Score=23.66 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=21.1
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|++|+..| ....|..|... |.-+ ++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRV-HTQE-TLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHH-HSSC-CSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHH-hCCC-CCCCCCC
Confidence 48899998755 44667778654 5432 4456664
No 205
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.19 E-value=5.6 Score=23.62 Aligned_cols=33 Identities=21% Similarity=0.063 Sum_probs=20.7
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.|.|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRI-HTGE-KPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HSSC-CCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHH-hCCC-CCCCCCC
Confidence 488999987554 4667778654 5432 4455543
No 206
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.99 E-value=4.8 Score=22.35 Aligned_cols=22 Identities=18% Similarity=0.516 Sum_probs=16.1
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 589999988664 4667777653
No 207
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.97 E-value=7.4 Score=22.98 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=19.9
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.|+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSGE-KPSGPS 44 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCCS-CCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 488888887554 3567777654 5432 444555
No 208
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=56.95 E-value=6.7 Score=21.79 Aligned_cols=22 Identities=23% Similarity=0.505 Sum_probs=15.4
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 489999988654 4566667543
No 209
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=56.56 E-value=2.5 Score=33.19 Aligned_cols=51 Identities=14% Similarity=0.238 Sum_probs=31.5
Q ss_pred ccCccccC-CCccceecCCCCCc--cchHHHhhhhhhcccCCCcccccccccccccchhHhhhh
Q 027681 31 IVDETEID-DDVKACFPCPFCYL--EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAEHF 91 (220)
Q Consensus 31 ~~de~e~d-dd~r~~F~CPfC~e--d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~D~i~Hi 91 (220)
.+++++.+ ++....++|| |+. .+....|-. ...+.|+-|+..+-.-+..|-
T Consensus 98 ~~~~m~~~e~~~~f~~~Cr-CG~~f~i~~~~l~~---------~~~v~C~sCSl~~~v~~~~~~ 151 (155)
T 2l6l_A 98 YLEEMSWNEGDHSFYLSCR-CGGKYSVSKDEAEE---------VSLISCDTCSLIIELLHYNHH 151 (155)
T ss_dssp ETTTSEEETTTTEEEEECS-SSCEEEEETTHHHH---------CCEEECSSSSCEEEEECCCCC
T ss_pred eHHHhccccCCcEEEEcCC-CCCeEEecHHHhCC---------CCEEECCCCceEEEEEEcccc
Confidence 44555542 3345679999 975 444444432 157899999998765555543
No 210
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=56.45 E-value=6.2 Score=21.64 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=16.0
Q ss_pred eecCCCCCccc-hHHHhhhhhhc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~e 65 (220)
.|.|+.|+..| ....|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHH
Confidence 58999998866 45667777654
No 211
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.24 E-value=6.6 Score=23.20 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=19.9
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTGE-RSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSSC-CSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 488888887554 4667777654 5432 444554
No 212
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=56.13 E-value=5.2 Score=27.12 Aligned_cols=14 Identities=29% Similarity=0.821 Sum_probs=9.8
Q ss_pred CCccceecCCCCCc
Q 027681 39 DDVKACFPCPFCYL 52 (220)
Q Consensus 39 dd~r~~F~CPfC~e 52 (220)
+|++.++.||.|+.
T Consensus 31 ~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 31 EDLPDDWACPVCGA 44 (52)
T ss_dssp TSSCTTCCCSSSCC
T ss_pred HHCCCCCcCCCCCC
Confidence 45677788888854
No 213
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=56.08 E-value=3 Score=30.66 Aligned_cols=44 Identities=18% Similarity=0.462 Sum_probs=26.6
Q ss_pred ccceecCCCCCccchHHH--hhhh-----hhcccCCCcccccccccccccch
Q 027681 41 VKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 41 ~r~~F~CPfC~ed~D~~~--Lc~H-----~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
...++.||.|.+.+.... -|-| |-...- +.....||+|...+..
T Consensus 12 ~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 12 SLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVSS 62 (115)
T ss_dssp CHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCHH
T ss_pred CCCCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccCc
Confidence 445789999976554221 2444 333222 2335789999998764
No 214
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=56.04 E-value=1 Score=32.57 Aligned_cols=46 Identities=24% Similarity=0.571 Sum_probs=25.6
Q ss_pred CccceecCCCCCccchHHH--hhhh-----hhcccCCC-cccccccccccccch
Q 027681 40 DVKACFPCPFCYLEIEAHM--ICSH-----LQEEHCFE-MKNAVCPLCAANLGK 85 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~~--Lc~H-----~~eeH~~e-~k~vVCPVCa~~vg~ 85 (220)
++...+.||.|.+.+.... -|-| |-..+-.. .....||+|...+..
T Consensus 17 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 17 AMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred hccCCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 4556788999977554321 2333 22211111 123589999998764
No 215
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.38 E-value=6.2 Score=21.70 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=16.1
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHHH
Confidence 589999988764 4667777643
No 216
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=55.19 E-value=1.2 Score=32.65 Aligned_cols=13 Identities=31% Similarity=0.759 Sum_probs=9.7
Q ss_pred ccccccccccccc
Q 027681 72 KNAVCPLCAANLG 84 (220)
Q Consensus 72 k~vVCPVCa~~vg 84 (220)
+...||+|...++
T Consensus 81 ~~~~CP~CR~~~~ 93 (114)
T 1v87_A 81 GSLQCPSCKTIYG 93 (114)
T ss_dssp SCCBCTTTCCBSS
T ss_pred CCCcCCCCCCccC
Confidence 4568999987654
No 217
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=55.14 E-value=5.1 Score=20.73 Aligned_cols=21 Identities=19% Similarity=0.535 Sum_probs=13.8
Q ss_pred eecCCCCCccchH-HHhhhhhh
Q 027681 44 CFPCPFCYLEIEA-HMICSHLQ 64 (220)
Q Consensus 44 ~F~CPfC~ed~D~-~~Lc~H~~ 64 (220)
.|.|+.|+..|.. ..|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHH
Confidence 4788888875543 55666654
No 218
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=54.94 E-value=7.2 Score=28.12 Aligned_cols=17 Identities=12% Similarity=0.184 Sum_probs=13.0
Q ss_pred chhHhhhhhhhccchhh
Q 027681 84 GKDAAEHFMVQHASSLK 100 (220)
Q Consensus 84 g~D~i~Hit~QH~~~fK 100 (220)
+.+|.+|+...|...|+
T Consensus 45 TSnL~rHL~~~H~~e~~ 61 (73)
T 2ct5_A 45 TSNLSYHLEKNHPEEFC 61 (73)
T ss_dssp THHHHHHHHHSCHHHHH
T ss_pred hHhHHHHHHHHCHHHHH
Confidence 45899999777777665
No 219
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.72 E-value=8.6 Score=22.18 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=19.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|. ...|..|... |..+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTGE-SGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTTS-SCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCCC-CCCCCC
Confidence 488888887554 4667777654 5433 334453
No 220
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.68 E-value=10 Score=22.30 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=24.7
Q ss_pred eecCC--CCCccc-hHHHhhhhhhcccCCCccccccccc
Q 027681 44 CFPCP--FCYLEI-EAHMICSHLQEEHCFEMKNAVCPLC 79 (220)
Q Consensus 44 ~F~CP--fC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVC 79 (220)
.|.|+ .|+..| ....|..|+.. |.- .++-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 58997 898855 45678888765 544 356789888
No 221
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.66 E-value=2.7 Score=28.02 Aligned_cols=45 Identities=18% Similarity=0.479 Sum_probs=25.0
Q ss_pred CccceecCCCCCccchHH-HhhhhhhcccCC---Ccccccccccccccc
Q 027681 40 DVKACFPCPFCYLEIEAH-MICSHLQEEHCF---EMKNAVCPLCAANLG 84 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~-~Lc~H~~eeH~~---e~k~vVCPVCa~~vg 84 (220)
+....+.||-|.+.+... .-|-|.-=..+. -.+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSSCCCSSCHHHHHCTT
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHHHCcCcCCCcCCccc
Confidence 455578899997644332 224442111111 125678999987654
No 222
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.44 E-value=8.7 Score=22.46 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=20.8
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCPL 78 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCPV 78 (220)
.|.|+.|+..|. ...|..|... |.- .++-.|++
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQ-THS-DKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHH-HTC-TTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHh-hCC-CCCccCCC
Confidence 488999987554 4667777654 543 34456654
No 223
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=54.24 E-value=3.8 Score=31.23 Aligned_cols=38 Identities=21% Similarity=0.444 Sum_probs=26.2
Q ss_pred ecCCCCCccchHHHhhhhhhcccCCC--------------cccccccccccc
Q 027681 45 FPCPFCYLEIEAHMICSHLQEEHCFE--------------MKNAVCPLCAAN 82 (220)
Q Consensus 45 F~CPfC~ed~D~~~Lc~H~~eeH~~e--------------~k~vVCPVCa~~ 82 (220)
-.||.|++-+|-.+|..-+-.--.++ .-.--||+|..-
T Consensus 9 ~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEE 60 (95)
T 2k5c_A 9 AKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEE 60 (95)
T ss_dssp EECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCE
T ss_pred ccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHH
Confidence 36999999999999988765433221 112239999875
No 224
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.99 E-value=3.9 Score=24.24 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=18.7
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|. ...|..|+.. |.-+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRL-HSRE-KSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-HHHT-TCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 488888877554 4556677654 4322 344555
No 225
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=53.83 E-value=1.8 Score=31.53 Aligned_cols=44 Identities=20% Similarity=0.433 Sum_probs=26.1
Q ss_pred CccceecCCCCCccchH-HHh--hhh-----hhcccCCCcccccccccccccch
Q 027681 40 DVKACFPCPFCYLEIEA-HMI--CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~-~~L--c~H-----~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
++...+.||.|.+.+.. ..+ |-| |-..+-. ....||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 11 ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE--TSKYCPICDVQVHK 62 (108)
T ss_dssp HHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHT--SCSBCTTTCCBSCS
T ss_pred ccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHH--hCCcCcCCCccccc
Confidence 45567889999765433 222 444 2222211 23789999988654
No 226
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=58.86 E-value=2.7 Score=21.66 Aligned_cols=20 Identities=15% Similarity=0.486 Sum_probs=13.0
Q ss_pred ecCCCCCccchH-HHhhhhhh
Q 027681 45 FPCPFCYLEIEA-HMICSHLQ 64 (220)
Q Consensus 45 F~CPfC~ed~D~-~~Lc~H~~ 64 (220)
|.|+.|+..|.. ..|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHIR 23 (26)
Confidence 778888876653 55556643
No 227
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=53.24 E-value=6.5 Score=20.15 Aligned_cols=21 Identities=19% Similarity=0.347 Sum_probs=13.7
Q ss_pred eecCCCCCccch-HHHhhhhhh
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQ 64 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~ 64 (220)
.|.|+.|+..|. ...|..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHH
Confidence 377888877553 456666654
No 228
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=52.32 E-value=1.5 Score=29.16 Aligned_cols=42 Identities=21% Similarity=0.649 Sum_probs=24.3
Q ss_pred eecCCCCCccchHH---------HhhhhhhcccCCC---cccccccccccccch
Q 027681 44 CFPCPFCYLEIEAH---------MICSHLQEEHCFE---MKNAVCPLCAANLGK 85 (220)
Q Consensus 44 ~F~CPfC~ed~D~~---------~Lc~H~~eeH~~e---~k~vVCPVCa~~vg~ 85 (220)
++.||-|.+.++.. .-|-|.-=..+.+ .+...||+|...+..
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccCh
Confidence 57799998877654 1244421111111 123589999988764
No 229
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=52.21 E-value=8.7 Score=19.52 Aligned_cols=10 Identities=30% Similarity=0.903 Sum_probs=5.0
Q ss_pred ecCCCCCccc
Q 027681 45 FPCPFCYLEI 54 (220)
Q Consensus 45 F~CPfC~ed~ 54 (220)
|.|+.|+..|
T Consensus 3 ~~C~~C~~~f 12 (29)
T 2m0e_A 3 HKCPHCDKKF 12 (29)
T ss_dssp CCCSSCCCCC
T ss_pred CcCCCCCccc
Confidence 4455555433
No 230
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=52.21 E-value=1.1 Score=32.74 Aligned_cols=46 Identities=24% Similarity=0.538 Sum_probs=27.2
Q ss_pred CCccceecCCCCCccchHHHh---hhh-----hhcccCCCcccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEAHMI---CSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~L---c~H-----~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
+.+...+.||.|.+.|..... |-| |-..+- ..+...||+|...+..
T Consensus 17 ~~l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 17 ESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWL-TEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHH-HHTCSBCTTTCCBCCG
T ss_pred ccCCCCCCCccCCccccCccccCCCCChhhHHHHHHHH-HHCcCCCCCCCCcCCH
Confidence 346678999999776654333 333 222111 1122689999998754
No 231
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=52.15 E-value=2.8 Score=30.63 Aligned_cols=16 Identities=25% Similarity=0.702 Sum_probs=12.6
Q ss_pred cCCCccceecCCCCCc
Q 027681 37 IDDDVKACFPCPFCYL 52 (220)
Q Consensus 37 ~ddd~r~~F~CPfC~e 52 (220)
.|......+.||||+.
T Consensus 20 ie~~q~~ky~C~fCgk 35 (73)
T 1ffk_W 20 VEIKHKKKYKCPVCGF 35 (73)
T ss_pred HHHhcccCccCCCCCC
Confidence 3456788999999976
No 232
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.86 E-value=12 Score=24.50 Aligned_cols=29 Identities=24% Similarity=0.533 Sum_probs=23.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMK 72 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k 72 (220)
.|.|++|+..| ....|..|+...|..+..
T Consensus 38 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 38 RFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred ccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 59999999866 567899999888887543
No 233
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=51.71 E-value=1.3 Score=28.62 Aligned_cols=42 Identities=21% Similarity=0.645 Sum_probs=24.9
Q ss_pred eecCCCCCccchHH---------HhhhhhhcccCCC---cccccccccccccch
Q 027681 44 CFPCPFCYLEIEAH---------MICSHLQEEHCFE---MKNAVCPLCAANLGK 85 (220)
Q Consensus 44 ~F~CPfC~ed~D~~---------~Lc~H~~eeH~~e---~k~vVCPVCa~~vg~ 85 (220)
.+.||-|.+.+... .-|-|.-=..+.+ .++..||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 46799998877653 2244432111211 125689999988765
No 234
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=51.55 E-value=5.9 Score=20.50 Aligned_cols=21 Identities=24% Similarity=0.524 Sum_probs=13.2
Q ss_pred ecCCCCCccch-HHHhhhhhhc
Q 027681 45 FPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 45 F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
|.|+.|+..|. ...|..|...
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTG
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 67888877553 4556666543
No 235
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=51.46 E-value=9.6 Score=25.99 Aligned_cols=46 Identities=22% Similarity=0.595 Sum_probs=29.2
Q ss_pred eecCC-CCCccchHHHhhhhhhcccCCCcccccccccccccc-hhHhhhh
Q 027681 44 CFPCP-FCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLG-KDAAEHF 91 (220)
Q Consensus 44 ~F~CP-fC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg-~D~i~Hi 91 (220)
...|| .|++.+-...|-.|+..+ -..+.+.|+-|...+. .++-.|.
T Consensus 16 ~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 16 VIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp CCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred ccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 45674 687777777777776642 2235677888877643 3555555
No 236
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=51.07 E-value=6.1 Score=32.96 Aligned_cols=27 Identities=26% Similarity=0.539 Sum_probs=19.7
Q ss_pred ceecCCCCCccchHHHhhhhhhcccCCCccccccccccccc
Q 027681 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
..+.|+.|+--+| + + .+-+||+|....
T Consensus 170 ~~~~C~~CG~i~~--g-------~-----~p~~CP~C~~~k 196 (202)
T 1yuz_A 170 KFHLCPICGYIHK--G-------E-----DFEKCPICFRPK 196 (202)
T ss_dssp CEEECSSSCCEEE--S-------S-----CCSBCTTTCCBG
T ss_pred cEEEECCCCCEEc--C-------c-----CCCCCCCCCCCh
Confidence 5899999987666 2 1 236999998753
No 237
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=50.94 E-value=4.5 Score=34.47 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=20.2
Q ss_pred cceecCCCCCccc--hHHHhhhhhhcc
Q 027681 42 KACFPCPFCYLEI--EAHMICSHLQEE 66 (220)
Q Consensus 42 r~~F~CPfC~ed~--D~~~Lc~H~~ee 66 (220)
.....|..|+++| .+..|-.|+++|
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHH
Confidence 4578899999888 389999998874
No 238
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=55.84 E-value=3.3 Score=21.72 Aligned_cols=20 Identities=20% Similarity=0.493 Sum_probs=13.0
Q ss_pred ecCCCCCccch-HHHhhhhhh
Q 027681 45 FPCPFCYLEIE-AHMICSHLQ 64 (220)
Q Consensus 45 F~CPfC~ed~D-~~~Lc~H~~ 64 (220)
|.|+.|+..|. ...|..|..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 67888877554 455666654
No 239
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.34 E-value=6.9 Score=23.09 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=19.4
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|. ...|..|+.. |.-+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTGE-RHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTCC-CBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCCC-CCCCCC
Confidence 488888887553 4667777654 5432 344554
No 240
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.14 E-value=11 Score=21.89 Aligned_cols=31 Identities=13% Similarity=0.357 Sum_probs=19.2
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCcccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVC 76 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVC 76 (220)
.|.|+.|+..|. ...|..|... |.-+ ++-.|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 43 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKT-HAAK-SGPSS 43 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGG-GCCC-CCTTC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCCC-CCcCC
Confidence 488999987554 4667778654 5432 33344
No 241
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.93 E-value=7.6 Score=21.49 Aligned_cols=22 Identities=27% Similarity=0.680 Sum_probs=15.9
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|++|+..|. ...|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRI 31 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHHH
Confidence 589999988664 4667777653
No 242
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=49.54 E-value=5.6 Score=28.33 Aligned_cols=48 Identities=21% Similarity=0.421 Sum_probs=30.3
Q ss_pred eecCCCCCccchHHHh-----hhh-----hhcccCC----C--cccccccc--cccc--cchhHhhhh
Q 027681 44 CFPCPFCYLEIEAHMI-----CSH-----LQEEHCF----E--MKNAVCPL--CAAN--LGKDAAEHF 91 (220)
Q Consensus 44 ~F~CPfC~ed~D~~~L-----c~H-----~~eeH~~----e--~k~vVCPV--Ca~~--vg~D~i~Hi 91 (220)
.|.||-|.+++..... |-| |-..|-. + ..+..||. |... +..+.+..+
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~l 72 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM 72 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHH
Confidence 6789999776654432 554 2221111 1 13568999 9999 888887766
No 243
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=49.42 E-value=8.5 Score=23.46 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=14.9
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMK 72 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k 72 (220)
-|.|+.|+..| ....|..|+...|.-+..
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 36677776644 344566666534554433
No 244
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=49.41 E-value=2.3 Score=31.11 Aligned_cols=15 Identities=27% Similarity=0.618 Sum_probs=11.9
Q ss_pred CCCccceecCCCCCc
Q 027681 38 DDDVKACFPCPFCYL 52 (220)
Q Consensus 38 ddd~r~~F~CPfC~e 52 (220)
|..+...|.||||+.
T Consensus 20 e~~q~~ky~C~fCgk 34 (72)
T 3jyw_9 20 EIQQHARYDCSFCGK 34 (72)
T ss_dssp HHHHHSCBCCSSCCS
T ss_pred HHHhccCccCCCCCC
Confidence 445678999999986
No 245
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=49.13 E-value=4.8 Score=29.78 Aligned_cols=31 Identities=16% Similarity=0.373 Sum_probs=20.7
Q ss_pred CccceecCCCCCcc--chHHHhhhhhhcccCCCccccccccccccc
Q 027681 40 DVKACFPCPFCYLE--IEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 40 d~r~~F~CPfC~ed--~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
.....|+||||+.+ ++.. .....||-|-...
T Consensus 23 ~q~~~y~Cp~CG~~~v~r~a-------------tGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 23 EMNEDHACPNCGEDRVDRQG-------------TGIWQCSYCDYKF 55 (83)
T ss_dssp HHHSCEECSSSCCEEEEEEE-------------TTEEEETTTCCEE
T ss_pred hccccCcCCCCCCcceeccC-------------CCeEECCCCCCEe
Confidence 34568999999863 2222 2356799998873
No 246
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.13 E-value=11 Score=21.98 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=20.0
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|- ...|..|+.. |.-+ ++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-k~~~C~ 44 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI-HTGK-KPSGPS 44 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT-SCCC-CCCCSC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-hCCC-CCCCCC
Confidence 488999987554 4667778654 5432 444565
No 247
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=48.49 E-value=2.5 Score=31.71 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=12.3
Q ss_pred CCCccceecCCCCCcc
Q 027681 38 DDDVKACFPCPFCYLE 53 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed 53 (220)
|......|.||||+..
T Consensus 29 e~~q~~ky~CpfCGk~ 44 (83)
T 3j21_i 29 EAKMRQKHTCPVCGRK 44 (83)
T ss_dssp HHHHHSCBCCSSSCSS
T ss_pred HHHhhcccCCCCCCCc
Confidence 4456789999999863
No 248
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.37 E-value=8.8 Score=22.23 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=19.0
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCCCccccccc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCFEMKNAVCP 77 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~e~k~vVCP 77 (220)
.|.|+.|+..|. ...|..|... |.-+ +.-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~ 44 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT-HSGQ-SGPSSG 44 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT-SSSS-CSCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-cCCC-CCCCCC
Confidence 488888887554 4567777654 5432 334443
No 249
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=47.91 E-value=5.8 Score=31.36 Aligned_cols=43 Identities=21% Similarity=0.482 Sum_probs=25.1
Q ss_pred CccceecCCCCCccchHHHhhhhhh---ccc--CC---Ccccccccccccc
Q 027681 40 DVKACFPCPFCYLEIEAHMICSHLQ---EEH--CF---EMKNAVCPLCAAN 82 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~~Lc~H~~---eeH--~~---e~k~vVCPVCa~~ 82 (220)
+.+..+.|+-|+..+....-..-++ ++. -. -.....||.|...
T Consensus 66 ~~p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~ 116 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSH 116 (139)
T ss_dssp EECCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCC
T ss_pred ecCCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCC
Confidence 5677999999988777644111111 110 00 0114689999876
No 250
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=47.19 E-value=1.5 Score=34.34 Aligned_cols=46 Identities=24% Similarity=0.564 Sum_probs=27.4
Q ss_pred CCccceecCCCCCccchHH-Hh--hhhhhcccCC----Ccccccccccccccc
Q 027681 39 DDVKACFPCPFCYLEIEAH-MI--CSHLQEEHCF----EMKNAVCPLCAANLG 84 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~-~L--c~H~~eeH~~----e~k~vVCPVCa~~vg 84 (220)
+++...+.||.|.+.|... .+ |-|.--..|. ......||+|...+.
T Consensus 49 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 49 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp -CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred hhCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 4566789999997755433 22 4443222222 123678999999874
No 251
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=46.60 E-value=10 Score=19.38 Aligned_cols=22 Identities=18% Similarity=0.477 Sum_probs=15.7
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 478999988664 5667777654
No 252
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=46.19 E-value=9.6 Score=19.57 Aligned_cols=21 Identities=24% Similarity=0.547 Sum_probs=14.3
Q ss_pred eecCCCCCccch-HHHhhhhhh
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQ 64 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~ 64 (220)
.|.|+.|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHH
Confidence 478999988654 455666653
No 253
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=45.78 E-value=8.6 Score=24.82 Aligned_cols=22 Identities=18% Similarity=0.357 Sum_probs=17.6
Q ss_pred ceecCCCCCccchHHHhhhhhh
Q 027681 43 ACFPCPFCYLEIEAHMICSHLQ 64 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~Lc~H~~ 64 (220)
..|.||-|++.|.+...-+|.+
T Consensus 8 ~~~~C~~C~~~i~~~~~~EH~D 29 (39)
T 2i5o_A 8 DQVPCEKCGSLVPVWDMPEHMD 29 (39)
T ss_dssp CEEECTTTCCEEEGGGHHHHHH
T ss_pred CCcccccccCcCCcccccchhh
Confidence 3678999999888877777765
No 254
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.69 E-value=10 Score=21.35 Aligned_cols=25 Identities=16% Similarity=0.393 Sum_probs=17.5
Q ss_pred eecCCCCCccch-HHHhhhhhhcccC
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~ 68 (220)
.|.|+.|+..|. ...|..|....|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 589999998664 5677788444454
No 255
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.24 E-value=17 Score=20.55 Aligned_cols=24 Identities=17% Similarity=0.412 Sum_probs=15.1
Q ss_pred eecCCCCCccch-HHHhhhhhhcccC
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~ 68 (220)
.|.|+.|+..|- ...|..|... |.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 34 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HT 34 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TS
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hC
Confidence 477888877543 4556667654 44
No 256
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.62 E-value=4.6 Score=29.48 Aligned_cols=14 Identities=21% Similarity=0.252 Sum_probs=8.1
Q ss_pred hHhhhhhhhccchh
Q 027681 86 DAAEHFMVQHASSL 99 (220)
Q Consensus 86 D~i~Hit~QH~~~f 99 (220)
+|.+||..-|..-|
T Consensus 50 ~L~rHL~~~H~~e~ 63 (76)
T 2djr_A 50 ALWKHLKSMHREEL 63 (76)
T ss_dssp HHHHHHHHTTHHHH
T ss_pred HHHHHHHHHCHHHH
Confidence 56666655555544
No 257
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.59 E-value=9.9 Score=22.08 Aligned_cols=22 Identities=18% Similarity=0.386 Sum_probs=14.3
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT 34 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHhHh
Confidence 478888877544 4566677654
No 258
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=43.80 E-value=23 Score=26.08 Aligned_cols=47 Identities=19% Similarity=0.523 Sum_probs=26.7
Q ss_pred CCccceecCCCCCccchHHH--hhhhhhcccCC----Ccccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEAHM--ICSHLQEEHCF----EMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~--Lc~H~~eeH~~----e~k~vVCPVCa~~vg~ 85 (220)
+.+...+.||.|.+.+.... -|-|.-=..+. ......||+|...+..
T Consensus 13 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp SCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred cCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 46677899999977554321 23332111111 1122389999988765
No 259
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=43.75 E-value=3.3 Score=31.58 Aligned_cols=16 Identities=19% Similarity=0.387 Sum_probs=12.2
Q ss_pred CCCccceecCCCCCcc
Q 027681 38 DDDVKACFPCPFCYLE 53 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed 53 (220)
|......|.||||+..
T Consensus 30 e~~q~~ky~CpfCgk~ 45 (92)
T 3iz5_m 30 EVSQHSKYFCEFCGKF 45 (92)
T ss_dssp HHHHHSCBCCTTTCSS
T ss_pred HHHHhccccCcccCCC
Confidence 3456778999999863
No 260
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=43.56 E-value=3.2 Score=31.67 Aligned_cols=15 Identities=27% Similarity=0.618 Sum_probs=11.8
Q ss_pred CCCccceecCCCCCc
Q 027681 38 DDDVKACFPCPFCYL 52 (220)
Q Consensus 38 ddd~r~~F~CPfC~e 52 (220)
|......|.||||+.
T Consensus 30 e~~q~~ky~CpfCgk 44 (92)
T 3izc_m 30 EIQQHARYDCSFCGK 44 (92)
T ss_dssp HHHHHSCCCCSSSCS
T ss_pred HHHHhcCCcCCCCCC
Confidence 345678899999986
No 261
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=43.42 E-value=3.2 Score=30.50 Aligned_cols=47 Identities=19% Similarity=0.450 Sum_probs=26.6
Q ss_pred CCccceecCCCCCccchHHH--hhhhhhcccCC----Ccccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIEAHM--ICSHLQEEHCF----EMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~--Lc~H~~eeH~~----e~k~vVCPVCa~~vg~ 85 (220)
+++...+.||.|.+.+.... -|-|.-=..+. ......||+|...+..
T Consensus 18 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 18 AHFVKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred HhccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 45667899999977554321 13231111111 1124579999998765
No 262
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=43.26 E-value=3.3 Score=30.74 Aligned_cols=45 Identities=18% Similarity=0.441 Sum_probs=26.7
Q ss_pred CccceecCCCCCccch-HHHh--hhhhhcccCCCccc-ccccccccccc
Q 027681 40 DVKACFPCPFCYLEIE-AHMI--CSHLQEEHCFEMKN-AVCPLCAANLG 84 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D-~~~L--c~H~~eeH~~e~k~-vVCPVCa~~vg 84 (220)
++...+.||.|.+.|. -+.| |-|.-=..+..... ..||+|...+.
T Consensus 18 ~l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 18 RLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred hchhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 3456789999976443 3333 55533333332211 68999998864
No 263
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=43.18 E-value=8.1 Score=33.37 Aligned_cols=26 Identities=19% Similarity=0.326 Sum_probs=23.6
Q ss_pred CccceecCCCCCccchHHHhhhhhhc
Q 027681 40 DVKACFPCPFCYLEIEAHMICSHLQE 65 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~~Lc~H~~e 65 (220)
=+++-|+|-.|+..+|+..|..|+..
T Consensus 150 vFWQFYKCe~CgKYvDId~~~~Hlk~ 175 (226)
T 2czr_A 150 IFWQFYKCEECGKYVDIENLEAHLRE 175 (226)
T ss_dssp EEEEEEECTTTCCEEEGGGHHHHHHT
T ss_pred EEEEEEehhhcCceecHHHHHHHHHH
Confidence 36899999999999999999999875
No 264
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=42.63 E-value=12 Score=20.37 Aligned_cols=20 Identities=25% Similarity=0.703 Sum_probs=13.6
Q ss_pred ecCCCCCccchH-HHhhhhhh
Q 027681 45 FPCPFCYLEIEA-HMICSHLQ 64 (220)
Q Consensus 45 F~CPfC~ed~D~-~~Lc~H~~ 64 (220)
|.|+.|+..|.. ..|..|..
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 788899886655 44556654
No 265
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=42.03 E-value=12 Score=20.17 Aligned_cols=22 Identities=23% Similarity=0.587 Sum_probs=15.6
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHHHH
Confidence 488999988654 4667777654
No 266
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.69 E-value=12 Score=25.61 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=18.7
Q ss_pred ceecCCCCCccch-HHHhhhhhh
Q 027681 43 ACFPCPFCYLEIE-AHMICSHLQ 64 (220)
Q Consensus 43 ~~F~CPfC~ed~D-~~~Lc~H~~ 64 (220)
-.|+||-|+..|. ...|..|..
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 5899999998887 788999965
No 267
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=41.16 E-value=3.7 Score=31.17 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=24.5
Q ss_pred cceecCCCCCccchHHH-hhhhhhccc---CCCccc--ccccccccccc
Q 027681 42 KACFPCPFCYLEIEAHM-ICSHLQEEH---CFEMKN--AVCPLCAANLG 84 (220)
Q Consensus 42 r~~F~CPfC~ed~D~~~-Lc~H~~eeH---~~e~k~--vVCPVCa~~vg 84 (220)
+..+.|+||+..++... -++|+.--- ..+..| .+|+-|-...+
T Consensus 33 r~~~~C~yCg~~~~~~~~~vDHIiP~s~gG~~~~~Nl~~lC~~CN~~K~ 81 (112)
T 2qgp_A 33 IARGICHYCGEIFPPEELTMDHLVPVVRGGKSTRGNVVPACKECNNRKK 81 (112)
T ss_dssp HHHTBCTTTCCBCCGGGEEEEESSCTTTTCCCSTTTEEEEEHHHHHHHH
T ss_pred HcCCcCCCCCCcCCCCCcEEEEEeehhcCCCCChhhChhhCHHHHHHHc
Confidence 34678999998775433 245654210 112233 56888866543
No 268
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=41.05 E-value=8.2 Score=26.10 Aligned_cols=14 Identities=29% Similarity=0.816 Sum_probs=10.5
Q ss_pred CCccceecCCCCCc
Q 027681 39 DDVKACFPCPFCYL 52 (220)
Q Consensus 39 dd~r~~F~CPfC~e 52 (220)
+|++..+.||.|+.
T Consensus 30 ~~lP~dw~CP~Cg~ 43 (52)
T 1yk4_A 30 EDLPDDWVCPLCGA 43 (52)
T ss_dssp GGSCTTCBCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 36777888888864
No 269
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=40.56 E-value=8.8 Score=28.48 Aligned_cols=8 Identities=50% Similarity=1.173 Sum_probs=5.4
Q ss_pred cccccccc
Q 027681 75 VCPLCAAN 82 (220)
Q Consensus 75 VCPVCa~~ 82 (220)
+||+|.+.
T Consensus 62 ~CPvCga~ 69 (81)
T 2kn9_A 62 SCPDCGAA 69 (81)
T ss_dssp CCTTTCCC
T ss_pred cCCCCCCC
Confidence 67777663
No 270
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.45 E-value=5 Score=27.57 Aligned_cols=42 Identities=19% Similarity=0.528 Sum_probs=24.0
Q ss_pred ceecCCCCCc-cchHHHh-hhhh-hcccCCCcccccccccccccch
Q 027681 43 ACFPCPFCYL-EIEAHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 43 ~~F~CPfC~e-d~D~~~L-c~H~-~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
....|+.|.+ .-++..| |-|. -=..+.. +...||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQE 58 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCCC
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchhc
Confidence 3567999965 4454432 4443 1111222 34689999988654
No 271
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.40 E-value=18 Score=20.46 Aligned_cols=24 Identities=17% Similarity=0.380 Sum_probs=17.3
Q ss_pred eecCCCCCccch-HHHhhhhhhcccC
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~ 68 (220)
.|.|+.|+..|. ...|..|... |.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 35 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRV-HT 35 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGG-TS
T ss_pred CeeCCCccchhCCHHHHHHHHHH-hC
Confidence 589999988654 4667788754 54
No 272
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.11 E-value=19 Score=20.42 Aligned_cols=24 Identities=17% Similarity=0.328 Sum_probs=15.7
Q ss_pred eecCCCCCccch-HHHhhhhhhcccC
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~ 68 (220)
.|.|+.|+..|. ...|..|... |.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 34 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERI-HT 34 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGG-CC
T ss_pred CeECCCCCCCcCCHHHHHHHHHH-hC
Confidence 488888887554 4556777653 43
No 273
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=39.67 E-value=4 Score=28.12 Aligned_cols=45 Identities=22% Similarity=0.501 Sum_probs=24.6
Q ss_pred CccceecCCCCCccch-HHHh-hhhh-hcccCCCcccccccccccccch
Q 027681 40 DVKACFPCPFCYLEIE-AHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D-~~~L-c~H~-~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
++...+.||-|.+.+. ...| |-|. -=..+... -..||+|...+..
T Consensus 20 ~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~-~~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 20 RLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEA-VDKCPMCYTVITF 67 (74)
T ss_dssp HHHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTT-CSBCTTTCCBCSE
T ss_pred cCccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhc-CccCCCcCcCccC
Confidence 4556788999976443 3321 3332 11111111 1789999987654
No 274
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=39.62 E-value=8.8 Score=28.35 Aligned_cols=21 Identities=19% Similarity=0.608 Sum_probs=14.5
Q ss_pred ceecCCCCCccchHHHhhhhh
Q 027681 43 ACFPCPFCYLEIEAHMICSHL 63 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~Lc~H~ 63 (220)
+.--||||+--+.-.||..|.
T Consensus 29 s~NiCPYC~nRls~eGl~RHV 49 (77)
T 2l7x_A 29 SYNICPYCASRLTSDGLARHV 49 (77)
T ss_dssp TTTCCTTTCCCCCTTTHHHHH
T ss_pred CcccChhhhccCCccchhhhc
Confidence 344688887777777777774
No 275
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.57 E-value=15 Score=21.33 Aligned_cols=22 Identities=14% Similarity=0.224 Sum_probs=14.8
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~ 34 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQAL 34 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 478888877554 4557777654
No 276
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.47 E-value=6.7 Score=23.09 Aligned_cols=22 Identities=23% Similarity=0.535 Sum_probs=13.6
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHHHHH
Confidence 477888877553 4556666543
No 277
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=39.34 E-value=11 Score=27.05 Aligned_cols=12 Identities=42% Similarity=1.040 Sum_probs=6.3
Q ss_pred CccceecCCCCC
Q 027681 40 DVKACFPCPFCY 51 (220)
Q Consensus 40 d~r~~F~CPfC~ 51 (220)
|++.++.||.|+
T Consensus 36 ~lPddw~CP~Cg 47 (70)
T 1dx8_A 36 DLSDSFMCPACR 47 (70)
T ss_dssp GSCTTCBCTTTC
T ss_pred hCCCCCcCCCCC
Confidence 344555555553
No 278
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=38.82 E-value=12 Score=19.49 Aligned_cols=21 Identities=19% Similarity=0.578 Sum_probs=14.1
Q ss_pred eecCCCCCccch-HHHhhhhhh
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQ 64 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~ 64 (220)
.|.|+.|+..|- ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHT
T ss_pred CcCCCCCCcccCCHHHHHHHHH
Confidence 378999987654 455666754
No 279
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.82 E-value=11 Score=20.80 Aligned_cols=22 Identities=27% Similarity=0.751 Sum_probs=15.7
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKT 31 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHHHHH
Confidence 489999988554 4667777654
No 280
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.71 E-value=15 Score=20.14 Aligned_cols=22 Identities=14% Similarity=0.283 Sum_probs=15.1
Q ss_pred eecCCCCCccchH-HHhhhhhhc
Q 027681 44 CFPCPFCYLEIEA-HMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D~-~~Lc~H~~e 65 (220)
.|.|+.|+..|.. ..|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 5899999875544 556677643
No 281
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=38.63 E-value=9.2 Score=26.15 Aligned_cols=14 Identities=36% Similarity=0.828 Sum_probs=10.2
Q ss_pred CCccceecCCCCCc
Q 027681 39 DDVKACFPCPFCYL 52 (220)
Q Consensus 39 dd~r~~F~CPfC~e 52 (220)
+|++..+.||.|+.
T Consensus 31 ~~lP~dw~CP~Cga 44 (55)
T 2v3b_B 31 EDIPADWVCPDCGV 44 (55)
T ss_dssp GGSCTTCCCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 35777888888854
No 282
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=38.48 E-value=16 Score=20.14 Aligned_cols=20 Identities=25% Similarity=0.710 Sum_probs=12.1
Q ss_pred ecCCCCCccc-hHHHhhhhhh
Q 027681 45 FPCPFCYLEI-EAHMICSHLQ 64 (220)
Q Consensus 45 F~CPfC~ed~-D~~~Lc~H~~ 64 (220)
|.|+.|+..| ....|..|+.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 6677777644 3455666654
No 283
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=38.35 E-value=11 Score=38.18 Aligned_cols=37 Identities=19% Similarity=0.418 Sum_probs=24.4
Q ss_pred ccceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 41 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 41 ~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
+-..|.||.|+..|...+-.. -.|.+..+.||.|.-.
T Consensus 246 ~s~~~~c~~~~~~~~~~~~~~-----fsfn~p~g~C~~C~G~ 282 (916)
T 3pih_A 246 FSENLMCPVCGIGFPEITPKL-----FSFNSPYGACPNCHGL 282 (916)
T ss_dssp EESSCBCTTTCCCCCCCSGGG-----GCTTSTTTBCTTTTTS
T ss_pred ecccccCcccCCccCCCCHhh-----cCCCCCCCcCCeeecc
Confidence 456799999987654332221 2455567999999754
No 284
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=38.04 E-value=3.6 Score=27.16 Aligned_cols=41 Identities=24% Similarity=0.468 Sum_probs=23.0
Q ss_pred eecCCCCCc-cchHHH------hhhh-----hhcccCCCcccccccccccccch
Q 027681 44 CFPCPFCYL-EIEAHM------ICSH-----LQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 44 ~F~CPfC~e-d~D~~~------Lc~H-----~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
++.||.|.+ .+.... -|-| |-+..- ..+...||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLF-VRGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHH-HTTSSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHH-HcCCCcCCCCCCcccc
Confidence 467999976 443331 2444 222221 1235679999988765
No 285
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=37.70 E-value=12 Score=30.70 Aligned_cols=51 Identities=25% Similarity=0.497 Sum_probs=13.7
Q ss_pred eecCCC----CCccchHHHhhhhhhcccCCCcccccccc----cccc-cchhHhhhhhhhccc
Q 027681 44 CFPCPF----CYLEIEAHMICSHLQEEHCFEMKNAVCPL----CAAN-LGKDAAEHFMVQHAS 97 (220)
Q Consensus 44 ~F~CPf----C~ed~D~~~Lc~H~~eeH~~e~k~vVCPV----Ca~~-vg~D~i~Hit~QH~~ 97 (220)
.||||| |.+.+--.....|-+. =+ -++--||+ |.-. ...++..|++..|+.
T Consensus 6 ~~pC~~~~~GC~~~~~y~~~~~He~~-C~--f~p~~Cp~~g~~C~~~G~~~~l~~H~~~~H~~ 65 (193)
T 2a25_A 6 LFPCKYASSGCEITLPHTEKADHEEL-CE--FRPYSCPCPGASCKWQGSLDAVMPHLMHQHKS 65 (193)
T ss_dssp ---------------------------------CEECCCC--CCCCEECSTTHHHHHHHHCTT
T ss_pred EecCCCCCCCCCcccccccccchhhc-CC--CCCccCCCCCCCCcCCCCHHHHHHHHHHHCCC
Confidence 466776 6665555555555432 11 13345665 5532 233677777666653
No 286
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=37.62 E-value=4.5 Score=31.50 Aligned_cols=15 Identities=33% Similarity=0.724 Sum_probs=11.9
Q ss_pred CCCccceecCCCCCc
Q 027681 38 DDDVKACFPCPFCYL 52 (220)
Q Consensus 38 ddd~r~~F~CPfC~e 52 (220)
|......|.||||+.
T Consensus 30 E~~q~aky~CpfCgk 44 (103)
T 4a17_Y 30 EITQHAKYGCPFCGK 44 (103)
T ss_dssp HHHHHSCEECTTTCC
T ss_pred HHHhhcCCCCCCCCC
Confidence 345678999999986
No 287
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=37.49 E-value=9.4 Score=31.09 Aligned_cols=27 Identities=37% Similarity=0.640 Sum_probs=17.6
Q ss_pred eecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 44 CFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 44 ~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
.-+||-|..++.- -+....|||-|+--
T Consensus 27 lP~CP~C~seytY------------eDg~l~vCPeC~hE 53 (138)
T 2akl_A 27 LPPCPQCNSEYTY------------EDGALLVCPECAHE 53 (138)
T ss_dssp SCCCTTTCCCCCE------------ECSSSEEETTTTEE
T ss_pred CCCCCCCCCcceE------------ecCCeEECCccccc
Confidence 4679999654421 12345799999874
No 288
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=37.44 E-value=2.2 Score=32.66 Aligned_cols=44 Identities=18% Similarity=0.524 Sum_probs=24.1
Q ss_pred ccceecCCCCCccchH-HHh-hhhhhcccCC---Ccccccccccccccc
Q 027681 41 VKACFPCPFCYLEIEA-HMI-CSHLQEEHCF---EMKNAVCPLCAANLG 84 (220)
Q Consensus 41 ~r~~F~CPfC~ed~D~-~~L-c~H~~eeH~~---e~k~vVCPVCa~~vg 84 (220)
+..++.||-|.+.+.. +.| |-|.-=..+. -.+...||+|...+.
T Consensus 50 ~~~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 50 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIK 98 (138)
T ss_dssp HHHHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCC
T ss_pred ccccCCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcCC
Confidence 3446789999774433 222 4442211121 123467999988753
No 289
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=43.51 E-value=7.1 Score=20.25 Aligned_cols=21 Identities=14% Similarity=0.429 Sum_probs=13.8
Q ss_pred eecCCCCCccch-HHHhhhhhh
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQ 64 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~ 64 (220)
.|.|+.|+..|. ...|..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 478999987654 345666654
No 290
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=36.73 E-value=5.4 Score=31.61 Aligned_cols=34 Identities=15% Similarity=0.427 Sum_probs=22.1
Q ss_pred CCCccceecCCCCCc-cchHHHhhhhhhcccCCCccccccccccccc
Q 027681 38 DDDVKACFPCPFCYL-EIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 38 ddd~r~~F~CPfC~e-d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
|......|.||||+. .+--.+ ..--.|+-|-..+
T Consensus 54 E~~q~akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 54 ESEMNEDHACPNCGEDRVDRQG------------TGIWQCSYCDYKF 88 (116)
T ss_dssp HHHHHSCEECSSSCCEEEEEEE------------TTEEEETTTCCEE
T ss_pred HHHhccCCcCCCCCCceeEecC------------ceeEECCCCCCEE
Confidence 345678999999986 443322 1233488888874
No 291
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=36.02 E-value=13 Score=24.92 Aligned_cols=26 Identities=27% Similarity=0.503 Sum_probs=22.3
Q ss_pred eecCCCCCccchHHHhhhhhhcccCCC
Q 027681 44 CFPCPFCYLEIEAHMICSHLQEEHCFE 70 (220)
Q Consensus 44 ~F~CPfC~ed~D~~~Lc~H~~eeH~~e 70 (220)
+-.|--|++.+-+..+++|++. ||..
T Consensus 17 YRvC~~CgkPi~lsAIvdHLen-hC~~ 42 (44)
T 2lo3_A 17 YRVCEKCGKPLALTAIVDHLEN-HCAG 42 (44)
T ss_dssp EEECTTTCCEEETTTHHHHHHH-CCTT
T ss_pred chhhcccCCcchHHHHHHHHHH-Hhcc
Confidence 4569999999999999999987 7754
No 292
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=35.89 E-value=9.4 Score=28.19 Aligned_cols=11 Identities=36% Similarity=0.905 Sum_probs=8.7
Q ss_pred cCCCCCccchH
Q 027681 46 PCPFCYLEIEA 56 (220)
Q Consensus 46 ~CPfC~ed~D~ 56 (220)
+||.|+..++.
T Consensus 49 ~CPvCgs~l~~ 59 (112)
T 1l8d_A 49 KCPVCGRELTD 59 (112)
T ss_dssp ECTTTCCEECH
T ss_pred CCCCCCCcCCH
Confidence 69999887764
No 293
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=35.68 E-value=11 Score=28.35 Aligned_cols=7 Identities=57% Similarity=1.402 Sum_probs=4.3
Q ss_pred ccccccc
Q 027681 75 VCPLCAA 81 (220)
Q Consensus 75 VCPVCa~ 81 (220)
+||+|.+
T Consensus 70 ~CPvCga 76 (87)
T 1s24_A 70 CCPDCGA 76 (87)
T ss_dssp CCSSSCC
T ss_pred CCCCCCC
Confidence 5666655
No 294
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=34.13 E-value=15 Score=25.23 Aligned_cols=14 Identities=29% Similarity=0.866 Sum_probs=10.1
Q ss_pred CCccceecCCCCCc
Q 027681 39 DDVKACFPCPFCYL 52 (220)
Q Consensus 39 dd~r~~F~CPfC~e 52 (220)
+|+...+.||-|+.
T Consensus 31 e~lP~dw~CP~Cg~ 44 (54)
T 4rxn_A 31 KDIPDDWVCPLCGV 44 (54)
T ss_dssp GGSCTTCBCTTTCC
T ss_pred hHCCCCCcCcCCCC
Confidence 36677788888854
No 295
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=33.74 E-value=13 Score=26.96 Aligned_cols=36 Identities=19% Similarity=0.493 Sum_probs=24.4
Q ss_pred ecCCCCCccchHHHhhhhhhcccCCCcccccccccccccch
Q 027681 45 FPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 45 F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
..||.|...++...+..- ..+.....||||-..+..
T Consensus 49 ~~CP~Cr~~~~~~~l~~l-----~i~~~~~~C~iC~~~~~~ 84 (133)
T 4ap4_A 49 NTCPTCRKKINHKRYHPI-----YIGSGTVSCPICMDGYSE 84 (133)
T ss_dssp SBCTTTCCBCTTTCEEEC-----BCSSSSCBCTTTCCBHHH
T ss_pred CCCCCCCCcCcccccccc-----ccCCCCCCCCCCCCcccc
Confidence 489999887776554332 234556789999887543
No 296
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=33.61 E-value=16 Score=26.85 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=28.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccCCCcccccccccccc
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
.|.|+.|+..| ....|..|....|.-| ++-.|.+|...
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~~ 88 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKRN 88 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCCS
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccCC
Confidence 59999999866 4567889955567654 67789986654
No 297
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=32.61 E-value=14 Score=26.39 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=20.6
Q ss_pred CCccceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 39 DDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
..+.....||.|.-.+.... +....+||-|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (70)
T 2js4_A 3 SRLLDILVCPVCKGRLEFQR-----------AQAELVCNADRLA 35 (70)
T ss_dssp CCCCCCCBCTTTCCBEEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCEEeC-----------CCCEEEcCCCCce
Confidence 44667789999965444321 1345789888553
No 298
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=32.53 E-value=14 Score=26.24 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=20.4
Q ss_pred CCccceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 39 DDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
..+.....||.|.-.+.... +....+||-|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (68)
T 2jr6_A 3 KKFLDILVCPVTKGRLEYHQ-----------DKQELWSRQAKLA 35 (68)
T ss_dssp CSSSCCCBCSSSCCBCEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 45667789999965443221 1255788888554
No 299
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=31.95 E-value=14 Score=26.25 Aligned_cols=33 Identities=12% Similarity=0.242 Sum_probs=20.8
Q ss_pred CCccceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 39 DDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
..+.....||.|.-.+.... +....+||-|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (68)
T 2hf1_A 3 AKFLEILVCPLCKGPLVFDK-----------SKDELICKGDRLA 35 (68)
T ss_dssp CCCEEECBCTTTCCBCEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 45667889999965443221 1355789988654
No 300
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=31.28 E-value=7.6 Score=30.16 Aligned_cols=56 Identities=25% Similarity=0.427 Sum_probs=33.0
Q ss_pred ecCCCCCccchHHHhhhhhhcccCCCccccccccccccc------c-hhHhhhhhhhccchhhhhhc
Q 027681 45 FPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL------G-KDAAEHFMVQHASSLKRRRK 104 (220)
Q Consensus 45 F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v------g-~D~i~Hit~QH~~~fKrrrr 104 (220)
-.||-|..+++..+=.-||+.=+..=.+.+.||-|...+ | .|+.= ||+|-+|.|+|
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYFC----~~chgLiSKkR 95 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFC----QHGHGLISKKR 95 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEE----TTTTEEECTTT
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchhh----ccCCceeecce
Confidence 568888766655443334443333345668899999875 2 35543 66666654443
No 301
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=31.07 E-value=5.3 Score=25.09 Aligned_cols=11 Identities=36% Similarity=0.890 Sum_probs=8.3
Q ss_pred ccccccccccc
Q 027681 74 AVCPLCAANLG 84 (220)
Q Consensus 74 vVCPVCa~~vg 84 (220)
..||+|...+.
T Consensus 44 ~~CP~Cr~~~~ 54 (55)
T 2ecm_A 44 YRCPLCSGPSS 54 (55)
T ss_dssp CCCTTSCCSSC
T ss_pred CcCCCCCCcCC
Confidence 67999987653
No 302
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=30.58 E-value=16 Score=37.57 Aligned_cols=37 Identities=22% Similarity=0.461 Sum_probs=24.2
Q ss_pred ccceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 41 VKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 41 ~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
+-..|.||.|+..|+..+=.. =.|.+-.+.||.|.-.
T Consensus 264 ~s~~~~cp~~g~~~~~~~p~~-----FSfN~p~GaCp~C~G~ 300 (972)
T 2r6f_A 264 FSEKHACPYCGFSIGELEPRL-----FSFNSPFGACPDCDGL 300 (972)
T ss_dssp EESSEECTTTCCEEECCCGGG-----GCSSSTTTBCTTTTSC
T ss_pred eeccccCCCCCCcCCCCChhh-----cCcCCCCCCCCCCcCc
Confidence 346799999987665332111 2455566999999853
No 303
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.39 E-value=23 Score=20.05 Aligned_cols=22 Identities=14% Similarity=0.292 Sum_probs=16.3
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTHH
T ss_pred CEeCCCcChhhCCHHHHHHHHHH
Confidence 599999988654 5667778653
No 304
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=30.17 E-value=7.1 Score=29.05 Aligned_cols=12 Identities=17% Similarity=0.603 Sum_probs=9.1
Q ss_pred cccccccccccc
Q 027681 72 KNAVCPLCAANL 83 (220)
Q Consensus 72 k~vVCPVCa~~v 83 (220)
...+|+.|..-+
T Consensus 35 ~~~~C~~CGE~~ 46 (133)
T 3o9x_A 35 HGLYCVHCEESI 46 (133)
T ss_dssp EEEEESSSSCEE
T ss_pred ceeECCCCCCEe
Confidence 446799999874
No 305
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=29.97 E-value=11 Score=24.45 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=22.5
Q ss_pred eecCCCCCc-cchHHHhhhhhhcccCCCcccccccccccccchhHhh
Q 027681 44 CFPCPFCYL-EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAE 89 (220)
Q Consensus 44 ~F~CPfC~e-d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~D~i~ 89 (220)
.++||.|+- ++.. -.+....||+.|..-+..+.|.
T Consensus 5 ~~~CP~C~~~~l~~-----------d~~~gelvC~~CG~v~~e~~id 40 (50)
T 1pft_A 5 QKVCPACESAELIY-----------DPERGEIVCAKCGYVIEENIID 40 (50)
T ss_dssp CCSCTTTSCCCEEE-----------ETTTTEEEESSSCCBCCCCCCC
T ss_pred cEeCcCCCCcceEE-----------cCCCCeEECcccCCcccccccc
Confidence 578999955 4321 1234568999998876665544
No 306
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=29.74 E-value=15 Score=33.25 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=23.2
Q ss_pred ceecCCCCCccchHHHhhhhhhcccCCCccccccccccc-ccchhHhh
Q 027681 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA-NLGKDAAE 89 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~-~vg~D~i~ 89 (220)
+...||||+--+. -+-+.-+||||-- .||.+.+|
T Consensus 277 ~~v~Cp~cgA~y~-------------~~~kG~lC~vC~l~~IG~~~~G 311 (320)
T 3mkr_B 277 PVEKCPLSGACYS-------------PEFKGQICKVTTVTEIGKDVIG 311 (320)
T ss_dssp CCEECTTTCCEEC-------------GGGTTSBCTTTSSBBSSCCCCC
T ss_pred CCccCCCCCCeec-------------hhhCCCCCCCCcCcccCCcccC
Confidence 4568999976442 1235679999987 47776655
No 307
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=29.73 E-value=24 Score=19.78 Aligned_cols=22 Identities=27% Similarity=0.729 Sum_probs=15.7
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV 28 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT
T ss_pred ceECCCCCcccCCHHHHHHHHHH
Confidence 488999988664 4567777654
No 308
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.55 E-value=5 Score=27.53 Aligned_cols=46 Identities=20% Similarity=0.450 Sum_probs=25.7
Q ss_pred CCccceecCCCCCccch-HHHh-hhhh-hcccCCCcccccccccccccch
Q 027681 39 DDVKACFPCPFCYLEIE-AHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D-~~~L-c~H~-~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
+++.....||-|.+.+. ...| |-|. -=..+. .+...||+|...+..
T Consensus 20 ~~~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~-~~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 20 RRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCA-EAVDKCPMCYTVITF 68 (75)
T ss_dssp HHHHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHH-HHCSBCTTTCCBCCC
T ss_pred HcCCCCCCCCcCCCCCCCEEEecCCCHHHHHHHh-hCCCCCccCCceecC
Confidence 44566788999976443 3321 3332 111111 133689999987654
No 309
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.50 E-value=5.4 Score=27.93 Aligned_cols=12 Identities=42% Similarity=0.941 Sum_probs=8.6
Q ss_pred cccccccccccc
Q 027681 73 NAVCPLCAANLG 84 (220)
Q Consensus 73 ~vVCPVCa~~vg 84 (220)
+..||+|...+.
T Consensus 64 ~~~CP~CR~~~~ 75 (81)
T 2ecl_A 64 NNRCPLCQQDWV 75 (81)
T ss_dssp CCBCTTTCCBCC
T ss_pred CCCCCCcCCCcc
Confidence 358999987653
No 310
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.28 E-value=28 Score=19.76 Aligned_cols=24 Identities=29% Similarity=0.632 Sum_probs=17.5
Q ss_pred eecCCCCCccch-HHHhhhhhhcccC
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~ 68 (220)
.|.|+.|+..|. ...|..|+.. |.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~-H~ 35 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRI-HT 35 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTT-TS
T ss_pred CEECCCCCCccCCHHHHHHHHHh-cC
Confidence 589999998665 4667788664 54
No 311
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=29.28 E-value=6.2 Score=29.69 Aligned_cols=23 Identities=35% Similarity=0.748 Sum_probs=13.9
Q ss_pred hhhhhcccCCCc---ccccccccccc
Q 027681 60 CSHLQEEHCFEM---KNAVCPLCAAN 82 (220)
Q Consensus 60 c~H~~eeH~~e~---k~vVCPVCa~~ 82 (220)
|.|.--.|+.+. .+..||+|...
T Consensus 73 C~H~FH~~Ci~~Wl~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 73 CNHAFHFHCISRWLKTRQVCPLDNRE 98 (106)
T ss_dssp TSCEEEHHHHHHHHTTCSBCSSSCSB
T ss_pred cCcEECHHHHHHHHHcCCcCcCCCCc
Confidence 555544444433 35689999875
No 312
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=29.21 E-value=16 Score=33.16 Aligned_cols=35 Identities=11% Similarity=0.136 Sum_probs=22.7
Q ss_pred cceecCCCCCccchHHHhhhhhhcccCCCccccccccccc-ccchhHhh
Q 027681 42 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA-NLGKDAAE 89 (220)
Q Consensus 42 r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~-~vg~D~i~ 89 (220)
.+...||||+--|.. +-+.-+||||-- .||.+.+|
T Consensus 285 ~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~a~G 320 (325)
T 3mv2_A 285 TPSVSDPLTGSKYVI-------------TEKDKIDRIAMISKIGAPASG 320 (325)
T ss_dssp SCEEECTTTCCEEEG-------------GGTTSBCSSSSCBBTTCCCCC
T ss_pred CCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCCccc
Confidence 346789999764421 235679999986 46665443
No 313
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=28.81 E-value=16 Score=26.00 Aligned_cols=33 Identities=9% Similarity=0.268 Sum_probs=20.6
Q ss_pred CCccceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 39 DDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
..+.....||.|.-.+.... +....+||-|...
T Consensus 3 ~~LLeiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (69)
T 2pk7_A 3 TKLLDILACPICKGPLKLSA-----------DKTELISKGAGLA 35 (69)
T ss_dssp CCGGGTCCCTTTCCCCEECT-----------TSSEEEETTTTEE
T ss_pred hHHHhheeCCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 45667789999965443211 1345789888654
No 314
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=28.16 E-value=12 Score=28.81 Aligned_cols=37 Identities=30% Similarity=0.631 Sum_probs=0.0
Q ss_pred cCCCCCccchHH--------------------HhhhhhhcccCCCc---ccccccccccc
Q 027681 46 PCPFCYLEIEAH--------------------MICSHLQEEHCFEM---KNAVCPLCAAN 82 (220)
Q Consensus 46 ~CPfC~ed~D~~--------------------~Lc~H~~eeH~~e~---k~vVCPVCa~~ 82 (220)
.|+-|-++|+.. .-|.|.--.|+.+. .+.+||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 588887776542 24777777777755 45789999775
No 315
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.09 E-value=32 Score=19.88 Aligned_cols=24 Identities=17% Similarity=0.361 Sum_probs=17.6
Q ss_pred eecCCCCCccch-HHHhhhhhhcccC
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHC 68 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~ 68 (220)
.|.|+.|+..|. ...|..|... |.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~ 36 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERT-HA 36 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GS
T ss_pred CeECCCCCcccCchHHHHHHHhH-hc
Confidence 589999988664 5677888764 43
No 316
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=27.68 E-value=24 Score=17.82 Aligned_cols=20 Identities=15% Similarity=0.411 Sum_probs=13.1
Q ss_pred ecCC--CCCccc-hHHHhhhhhh
Q 027681 45 FPCP--FCYLEI-EAHMICSHLQ 64 (220)
Q Consensus 45 F~CP--fC~ed~-D~~~Lc~H~~ 64 (220)
|.|+ .|+..| ....|..|..
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHG
T ss_pred CCCcCCcCcCccCCHHHHHHHHH
Confidence 6788 887755 4456666654
No 317
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.59 E-value=14 Score=26.27 Aligned_cols=11 Identities=27% Similarity=0.809 Sum_probs=8.4
Q ss_pred ccccccccccc
Q 027681 73 NAVCPLCAANL 83 (220)
Q Consensus 73 ~vVCPVCa~~v 83 (220)
+..||+|...+
T Consensus 58 ~~~CplCr~~~ 68 (80)
T 2d8s_A 58 TRCCELCKYEF 68 (80)
T ss_dssp CSBCSSSCCBC
T ss_pred CCCCCCCCCee
Confidence 46899998765
No 318
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=27.59 E-value=27 Score=19.68 Aligned_cols=24 Identities=13% Similarity=0.267 Sum_probs=17.4
Q ss_pred eecCCCCCccc-hHHHhhhhhhcccC
Q 027681 44 CFPCPFCYLEI-EAHMICSHLQEEHC 68 (220)
Q Consensus 44 ~F~CPfC~ed~-D~~~Lc~H~~eeH~ 68 (220)
.|.|+.|+..| ....|..|... |.
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~-H~ 35 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQRS-CS 35 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-TT
T ss_pred CeECCCCCcccCCHHHHHHHhhh-cC
Confidence 59999998866 45677778654 43
No 319
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=27.14 E-value=7.1 Score=29.42 Aligned_cols=10 Identities=40% Similarity=0.982 Sum_probs=7.9
Q ss_pred ceecCCCCCc
Q 027681 43 ACFPCPFCYL 52 (220)
Q Consensus 43 ~~F~CPfC~e 52 (220)
..|.||||..
T Consensus 29 ~dy~Cp~C~~ 38 (184)
T 4dvc_A 29 FSFYCPHCNT 38 (184)
T ss_dssp ECTTCHHHHH
T ss_pred ECCCCHhHHH
Confidence 3699999954
No 320
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=26.17 E-value=30 Score=19.28 Aligned_cols=21 Identities=19% Similarity=0.328 Sum_probs=14.8
Q ss_pred eecCCC--CCccch-HHHhhhhhh
Q 027681 44 CFPCPF--CYLEIE-AHMICSHLQ 64 (220)
Q Consensus 44 ~F~CPf--C~ed~D-~~~Lc~H~~ 64 (220)
.|.|++ |+..|. ...|..|..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHH
Confidence 589986 988664 456777754
No 321
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=25.69 E-value=24 Score=26.16 Aligned_cols=15 Identities=13% Similarity=0.388 Sum_probs=10.1
Q ss_pred ceecCCCCCccchHH
Q 027681 43 ACFPCPFCYLEIEAH 57 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~ 57 (220)
....||||+.-|-..
T Consensus 52 g~~~CpYCg~~f~l~ 66 (80)
T 2jvm_A 52 GFVECGYCDRRYIHE 66 (80)
T ss_dssp CEEECSSSSCEEEEH
T ss_pred CeEECCCCCCEEEec
Confidence 357799998755433
No 322
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=25.31 E-value=34 Score=20.59 Aligned_cols=22 Identities=27% Similarity=0.523 Sum_probs=11.4
Q ss_pred eecCCCCCc-cchHHHhhhhhhc
Q 027681 44 CFPCPFCYL-EIEAHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~e-d~D~~~Lc~H~~e 65 (220)
.|.||-|.. -=|.-.|-.|.+|
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHHH
Confidence 456666632 4455555555443
No 323
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=25.31 E-value=22 Score=25.22 Aligned_cols=33 Identities=12% Similarity=0.013 Sum_probs=20.0
Q ss_pred CCCccceecCCCCCccchHHHhhhhhhcccCCCccccccccccc
Q 027681 38 DDDVKACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAA 81 (220)
Q Consensus 38 ddd~r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~ 81 (220)
|..+.....||.|.-.+.... +....+||-|..
T Consensus 4 d~~LLeiL~CP~ck~~L~~~~-----------~~g~LvC~~c~~ 36 (67)
T 2jny_A 4 DPQLLEVLACPKDKGPLRYLE-----------SEQLLVNERLNL 36 (67)
T ss_dssp CGGGTCCCBCTTTCCBCEEET-----------TTTEEEETTTTE
T ss_pred CHHHHHHhCCCCCCCcCeEeC-----------CCCEEEcCCCCc
Confidence 445667888999954333211 234578888854
No 324
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=25.16 E-value=6.4 Score=26.43 Aligned_cols=39 Identities=26% Similarity=0.662 Sum_probs=21.5
Q ss_pred eecCCCCCcc-chHHHh---hhhh------hcccCCCcccccccccccccc
Q 027681 44 CFPCPFCYLE-IEAHMI---CSHL------QEEHCFEMKNAVCPLCAANLG 84 (220)
Q Consensus 44 ~F~CPfC~ed-~D~~~L---c~H~------~eeH~~e~k~vVCPVCa~~vg 84 (220)
...|+-|.++ -|..-+ |-|. ...- ..+...||+|...+.
T Consensus 7 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~--~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 7 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRL--KKAGASCPICKKEIQ 55 (63)
T ss_dssp GSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHH--HHTTCBCTTTCCBCC
T ss_pred CCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHH--HHhCCcCCCcCchhh
Confidence 4569999664 343332 4443 2211 122358999998764
No 325
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=24.89 E-value=21 Score=25.56 Aligned_cols=12 Identities=25% Similarity=0.860 Sum_probs=8.7
Q ss_pred ceecCCCCCccc
Q 027681 43 ACFPCPFCYLEI 54 (220)
Q Consensus 43 ~~F~CPfC~ed~ 54 (220)
....||||+.-|
T Consensus 39 g~~~CpYCg~~f 50 (67)
T 2jrr_A 39 GWVECPYCDCKY 50 (67)
T ss_dssp SEEEETTTTEEE
T ss_pred CeEECCCCCCEE
Confidence 357799997644
No 326
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=24.85 E-value=32 Score=20.97 Aligned_cols=22 Identities=32% Similarity=0.670 Sum_probs=16.3
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|+..
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~ 46 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLEL 46 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 599999998664 4567777653
No 327
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=24.37 E-value=6.9 Score=31.25 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=18.9
Q ss_pred hhhhhhhhhHHHHHHhhhcccccceeeeeeeEEEEee
Q 027681 181 SSEYKLLWSQLLFKKLANKISVSSTMHFKIDVLLVIG 217 (220)
Q Consensus 181 ~~~wk~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (220)
+..++....+.. +.|.+..|..|-.|-|+--.+.|
T Consensus 152 s~~~~~~v~~~~--~~a~~~Gv~GvPtfvv~g~~~~G 186 (202)
T 3fz5_A 152 DPALKETVRKIG--EDAVARGIFGSPFFLVDDEPFWG 186 (202)
T ss_dssp CHHHHHHHHHHH--HHHHHTTCCSSSEEEETTEEEES
T ss_pred CHHHHHHHHHHH--HHHHHCCCCcCCEEEECCEEEec
Confidence 345555544432 34455667777777666444444
No 328
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=24.29 E-value=13 Score=28.82 Aligned_cols=44 Identities=16% Similarity=0.352 Sum_probs=26.0
Q ss_pred CCccceecCCCCCccchHH--Hhhhh-----hhcccCCCccccccccccccc
Q 027681 39 DDVKACFPCPFCYLEIEAH--MICSH-----LQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 39 dd~r~~F~CPfC~ed~D~~--~Lc~H-----~~eeH~~e~k~vVCPVCa~~v 83 (220)
+.+...|.||.|.+-+... .-|-| |-... .......||+|...+
T Consensus 26 ~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~-~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 26 TKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASI-LSSGPQNCAACVHEG 76 (141)
T ss_dssp GGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHH-GGGSCEECHHHHHTT
T ss_pred ccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHH-HhcCCCCCCCCCCcc
Confidence 4567789999997644322 23433 22221 123446899998753
No 329
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=24.26 E-value=27 Score=36.00 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=23.1
Q ss_pred cceecCCCCC-ccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 42 KACFPCPFCY-LEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 42 r~~F~CPfC~-ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
-..|.||.|+ ..|+..+=.. =.|.+-.+.||.|.-.
T Consensus 273 s~~~~c~~~g~~~~~~~~p~~-----FSfN~p~GaCp~C~G~ 309 (993)
T 2ygr_A 273 SEKLACPNGHALAVDDLEPRS-----FSFNSPYGACPDCSGL 309 (993)
T ss_dssp ESSCBCTTCCCCSCSCCCGGG-----GCTTSTTTBCTTTTTS
T ss_pred cccccCCCCCCcccCCCChhh-----cCcCCCCCCCCCCcCc
Confidence 4578999998 6554321111 2455566999999853
No 330
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=23.69 E-value=22 Score=24.15 Aligned_cols=38 Identities=18% Similarity=0.407 Sum_probs=25.1
Q ss_pred ccceecCCCCCc-cchHHHhhhhhhcccCCCcccccccccccccchhHhh
Q 027681 41 VKACFPCPFCYL-EIEAHMICSHLQEEHCFEMKNAVCPLCAANLGKDAAE 89 (220)
Q Consensus 41 ~r~~F~CPfC~e-d~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~vg~D~i~ 89 (220)
+.....||.|+. ++. . -.+....||..|..-+..+.|.
T Consensus 8 ll~~~~Cp~C~~~~lv---------~--D~~~ge~vC~~CGlVl~e~~iD 46 (58)
T 1dl6_A 8 ALPRVTCPNHPDAILV---------E--DYRAGDMICPECGLVVGDRVID 46 (58)
T ss_dssp CCSCCSBTTBSSSCCE---------E--CSSSCCEECTTTCCEECCSCCC
T ss_pred ccccccCcCCCCCcee---------E--eCCCCeEEeCCCCCEEeccccc
Confidence 334457999964 431 1 1255679999998888776665
No 331
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=23.65 E-value=32 Score=26.49 Aligned_cols=26 Identities=23% Similarity=0.509 Sum_probs=20.4
Q ss_pred CccceecCCCCCccchHHHhhhhhhc
Q 027681 40 DVKACFPCPFCYLEIEAHMICSHLQE 65 (220)
Q Consensus 40 d~r~~F~CPfC~ed~D~~~Lc~H~~e 65 (220)
+.-.+|.||-|+..+--.-..-|++.
T Consensus 66 ~~s~~~~C~nC~R~vaa~RFApHLeK 91 (99)
T 3mhs_C 66 ESSQYIHCENCGRDVSANRLAAHLQR 91 (99)
T ss_dssp TTSCEEECTTTCCEEEGGGHHHHHHH
T ss_pred cCCCeEECCCCCCCchhhhhHHHHHH
Confidence 44568999999888888888888765
No 332
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=23.42 E-value=32 Score=20.88 Aligned_cols=19 Identities=21% Similarity=0.604 Sum_probs=11.9
Q ss_pred cccccccccc-cchhHhhhh
Q 027681 73 NAVCPLCAAN-LGKDAAEHF 91 (220)
Q Consensus 73 ~vVCPVCa~~-vg~D~i~Hi 91 (220)
.+-||||-.+ +...+-.|+
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 3679999876 444444444
No 333
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=23.29 E-value=12 Score=24.53 Aligned_cols=41 Identities=27% Similarity=0.639 Sum_probs=21.9
Q ss_pred eecCCCCCccchH---HHhhhhhhcccCCC---cccccccccccccc
Q 027681 44 CFPCPFCYLEIEA---HMICSHLQEEHCFE---MKNAVCPLCAANLG 84 (220)
Q Consensus 44 ~F~CPfC~ed~D~---~~Lc~H~~eeH~~e---~k~vVCPVCa~~vg 84 (220)
...||-|.+.+.. ..-|-|.-=..+.. .+...||+|...+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 3468888765543 12244432111211 13457999988765
No 334
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=23.27 E-value=7.4 Score=30.76 Aligned_cols=23 Identities=13% Similarity=-0.045 Sum_probs=14.3
Q ss_pred HhhhcccccceeeeeeeEEEEee
Q 027681 195 KLANKISVSSTMHFKIDVLLVIG 217 (220)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~ 217 (220)
+.|.+..|..|-.|-|+--.+.|
T Consensus 158 ~~a~~~Gv~G~Ptfvi~g~~~~G 180 (203)
T 2imf_A 158 HAAIERKVFGVPTMFLGDEMWWG 180 (203)
T ss_dssp HHHHHTTCCSSSEEEETTEEEES
T ss_pred HHHHHCCCCcCCEEEECCEEEEC
Confidence 34566777777777766444444
No 335
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=22.53 E-value=37 Score=23.97 Aligned_cols=30 Identities=13% Similarity=0.318 Sum_probs=22.1
Q ss_pred cceecCCCCCccchHHHhhhhhhcccCCCccccccccccccc
Q 027681 42 KACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAANL 83 (220)
Q Consensus 42 r~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~v 83 (220)
...|.|.-|+.++++. ....+-||-|..++
T Consensus 19 ~v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 4579999998877743 12457899998764
No 336
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=22.45 E-value=8 Score=31.26 Aligned_cols=35 Identities=11% Similarity=-0.018 Sum_probs=21.9
Q ss_pred hhhhhhhhhHHHHHHhhhcccccceeeeeee----EEEEee
Q 027681 181 SSEYKLLWSQLLFKKLANKISVSSTMHFKID----VLLVIG 217 (220)
Q Consensus 181 ~~~wk~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~ 217 (220)
+..++..-.+.. +.|.+..|.+|-.|-|+ --.+.|
T Consensus 161 s~~~~~~v~~~~--~~a~~~gv~G~Ptfvv~~~g~~~~~~G 199 (226)
T 1r4w_A 161 TELVKSKLRETT--GAACKYGAFGLPTTVAHVDGKTYMLFG 199 (226)
T ss_dssp SHHHHHHHHHHH--HHHHHTTCCSSCEEEEEETTEEEEEES
T ss_pred CHHHHHHHHHHH--HHHHHCCCCCCCEEEEeCCCCcCceeC
Confidence 445555544442 45667788888888887 445555
No 337
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.97 E-value=56 Score=22.28 Aligned_cols=25 Identities=24% Similarity=0.485 Sum_probs=14.9
Q ss_pred eecCCCCCccch-HHHhhhhhhcccCC
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQEEHCF 69 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~eeH~~ 69 (220)
-|.|+.|++.|. ...|..|... |.-
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~-Htg 38 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQ-HGV 38 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHH-HTT
T ss_pred CcCCCCCCCccCCHHHHHhhhhh-hCC
Confidence 477888877554 3456666554 443
No 338
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=21.85 E-value=14 Score=27.48 Aligned_cols=11 Identities=45% Similarity=1.023 Sum_probs=6.1
Q ss_pred ccccccccccc
Q 027681 73 NAVCPLCAANL 83 (220)
Q Consensus 73 ~vVCPVCa~~v 83 (220)
++.||-|...+
T Consensus 31 ~afCPeCgq~L 41 (81)
T 2jrp_A 31 QALCPDCRQPL 41 (81)
T ss_dssp EEECSSSCSCC
T ss_pred cccCcchhhHH
Confidence 34566666554
No 339
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=21.79 E-value=35 Score=26.10 Aligned_cols=18 Identities=11% Similarity=0.143 Sum_probs=11.3
Q ss_pred ceecCCCCCc-cchHHHhh
Q 027681 43 ACFPCPFCYL-EIEAHMIC 60 (220)
Q Consensus 43 ~~F~CPfC~e-d~D~~~Lc 60 (220)
..|.||||+. .=.+..|.
T Consensus 30 ~d~~Cp~C~~~~~~l~~l~ 48 (195)
T 2znm_A 30 FGYFCVHCHHFDPLLLKLG 48 (195)
T ss_dssp ECTTSCCTTSSCHHHHHHH
T ss_pred ECCCChhHHHHhHHHHHHH
Confidence 4689999975 33344443
No 340
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.13 E-value=28 Score=20.02 Aligned_cols=22 Identities=14% Similarity=0.310 Sum_probs=16.2
Q ss_pred eecCCCCCccch-HHHhhhhhhc
Q 027681 44 CFPCPFCYLEIE-AHMICSHLQE 65 (220)
Q Consensus 44 ~F~CPfC~ed~D-~~~Lc~H~~e 65 (220)
.|.|+.|+..|. ...|..|...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHHH
T ss_pred CeECcccCcccCCHHHHHHHHHH
Confidence 599999988554 4667778654
No 341
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=21.06 E-value=53 Score=25.44 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=20.6
Q ss_pred ceecCCCCCccchHHHhhhhhhcccCCCcccccccccccc
Q 027681 43 ACFPCPFCYLEIEAHMICSHLQEEHCFEMKNAVCPLCAAN 82 (220)
Q Consensus 43 ~~F~CPfC~ed~D~~~Lc~H~~eeH~~e~k~vVCPVCa~~ 82 (220)
..|.|--|+..| + .--.++..||.|...
T Consensus 66 ~p~~C~~CG~~F-----~-------~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 66 KPAQCRKCGFVF-----K-------AEINIPSRCPKCKSE 93 (105)
T ss_dssp CCCBBTTTCCBC-----C-------CCSSCCSSCSSSCCC
T ss_pred ECcChhhCcCee-----c-------ccCCCCCCCcCCCCC
Confidence 478999999888 1 112456899999874
No 342
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=20.98 E-value=5 Score=28.29 Aligned_cols=45 Identities=27% Similarity=0.637 Sum_probs=25.9
Q ss_pred CccceecCCCCCc-cchHHHh-hhhh-hcccCCCcccccccccccccch
Q 027681 40 DVKACFPCPFCYL-EIEAHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 40 d~r~~F~CPfC~e-d~D~~~L-c~H~-~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
+++....||-|.+ ..|...+ |-|. -=..+... -..||+|...+..
T Consensus 14 ~l~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~-~~~CP~Cr~~i~~ 61 (79)
T 2yho_A 14 KLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQ-LQSCPVCRSRVEH 61 (79)
T ss_dssp HHHHHTBCTTTSSSBCCEEEETTCBCCBCHHHHTT-CSBCTTTCCBCCE
T ss_pred cCCCCCEeEEeCcccCcEEEECCCCHHHHHHHHHh-cCcCCCCCchhhC
Confidence 3455678999966 4444443 4443 11112221 1389999998765
No 343
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=20.95 E-value=9.4 Score=31.69 Aligned_cols=13 Identities=31% Similarity=1.160 Sum_probs=10.8
Q ss_pred CccceecCCCCCc
Q 027681 40 DVKACFPCPFCYL 52 (220)
Q Consensus 40 d~r~~F~CPfC~e 52 (220)
|+..+|.|||||-
T Consensus 6 ~~~~D~~cPwcyi 18 (239)
T 3gl5_A 6 EIWSDIACPWCYV 18 (239)
T ss_dssp EEEECSSCHHHHH
T ss_pred EEEEeCcCHhHHH
Confidence 4677899999986
No 344
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=20.93 E-value=9.1 Score=31.62 Aligned_cols=14 Identities=14% Similarity=0.330 Sum_probs=11.0
Q ss_pred CccceecCCCCCcc
Q 027681 40 DVKACFPCPFCYLE 53 (220)
Q Consensus 40 d~r~~F~CPfC~ed 53 (220)
|+..+|.|||||-.
T Consensus 9 ~~~~D~~CPwcyi~ 22 (234)
T 3rpp_A 9 ELFYDVLSPYSWLG 22 (234)
T ss_dssp EEEECTTCHHHHHH
T ss_pred EEEEeCCCHHHHHH
Confidence 46678999999763
No 345
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=20.84 E-value=15 Score=33.00 Aligned_cols=44 Identities=23% Similarity=0.579 Sum_probs=27.1
Q ss_pred ccceecCCCCCcc-chHHHh-hhhh-hcccCCCcccccccccccccch
Q 027681 41 VKACFPCPFCYLE-IEAHMI-CSHL-QEEHCFEMKNAVCPLCAANLGK 85 (220)
Q Consensus 41 ~r~~F~CPfC~ed-~D~~~L-c~H~-~eeH~~e~k~vVCPVCa~~vg~ 85 (220)
+...+.||-|.+. .+...| |-|. -=..|... ...||+|...+..
T Consensus 292 l~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~-~~~CP~CR~~i~~ 338 (345)
T 3t6p_A 292 LQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPS-LRKCPICRGIIKG 338 (345)
T ss_dssp HHTTCBCTTTSSSBCCEEEETTCCEEECTTTGGG-CSBCTTTCCBCCE
T ss_pred CcCCCCCCccCCcCCceEEcCCCChhHhHHHHhc-CCcCCCCCCCccC
Confidence 3457899999764 444443 5665 33333332 2689999987653
No 346
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=20.56 E-value=73 Score=16.47 Aligned_cols=21 Identities=19% Similarity=0.532 Sum_probs=13.4
Q ss_pred ecCC--CCCccc-hHHHhhhhhhc
Q 027681 45 FPCP--FCYLEI-EAHMICSHLQE 65 (220)
Q Consensus 45 F~CP--fC~ed~-D~~~Lc~H~~e 65 (220)
|.|+ .|+..| ....|..|...
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH
Confidence 6786 787755 34566667543
Done!