Query 027682
Match_columns 220
No_of_seqs 127 out of 250
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 23:16:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027682.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027682hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c0ha1 c.1.8.3 (A:18-367) end 72.5 0.74 5.4E-05 35.5 2.0 33 169-201 21-59 (350)
2 d1l8na2 d.92.2.2 (A:4-142) alp 67.6 4 0.00029 29.9 5.2 39 84-125 84-122 (139)
3 d1h41a2 d.92.2.2 (A:5-151) alp 65.0 2.6 0.00019 31.4 3.6 40 84-126 93-132 (147)
4 d1jaka2 d.92.2.1 (A:8-150) bet 49.3 17 0.0012 25.7 5.8 44 71-123 72-115 (143)
5 d2choa3 d.92.2.3 (A:5-126) Glu 27.8 36 0.0026 23.0 4.4 32 84-122 73-104 (122)
6 d1nq6a_ c.1.8.3 (A:) Xylanase 27.1 9.4 0.00069 30.4 1.1 39 166-204 34-84 (302)
7 d1qbaa4 d.92.2.1 (A:201-337) B 27.0 89 0.0065 21.3 7.9 33 84-123 85-117 (137)
8 d2gjxa2 d.92.2.1 (A:23-166) be 26.7 35 0.0026 23.3 4.2 32 85-123 91-122 (144)
9 d2cbia3 d.92.2.3 (A:41-178) Hy 25.4 34 0.0025 23.5 4.0 32 84-122 89-120 (138)
10 d1nowa2 d.92.2.1 (A:55-199) be 23.4 47 0.0034 22.7 4.4 32 85-123 92-123 (145)
11 d1vbua1 c.1.8.3 (A:517-840) Xy 23.3 8.3 0.00061 30.9 0.1 37 168-204 38-86 (324)
12 d1pbya1 a.3.1.7 (A:1-85) Quino 20.4 23 0.0017 24.0 2.0 18 181-198 31-49 (85)
13 d1qnra_ c.1.8.3 (A:) Beta-mann 20.4 25 0.0018 27.0 2.4 24 179-202 31-54 (344)
No 1
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]}
Probab=72.54 E-value=0.74 Score=35.50 Aligned_cols=33 Identities=18% Similarity=0.123 Sum_probs=26.8
Q ss_pred cccccCCccccc------cChhhHhhhHhHHHhcCCCcc
Q 027682 169 QNAVTSSYTFAW------WDWKRWEKEIDWMALQGINLP 201 (220)
Q Consensus 169 ~N~cTfsYS~aw------WdW~rWErEIDWMAL~GINlp 201 (220)
.|+|.+.|...+ .++++.|+.|+-|+-+|+|+.
T Consensus 21 ~N~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~N~v 59 (350)
T d2c0ha1 21 ANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSV 59 (350)
T ss_dssp EECCCSSTTCSSSTTCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EecCCcccccccCcccCCCCHHHHHHHHHHHHHcCCCEE
Confidence 477777776544 578999999999999999985
No 2
>d1l8na2 d.92.2.2 (A:4-142) alpha-D-glucuronidase, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=67.57 E-value=4 Score=29.89 Aligned_cols=39 Identities=28% Similarity=0.427 Sum_probs=29.5
Q ss_pred CceeEEEecCCCCCCCCCCeEEEEecCHHHHHHHHHHHHHHh
Q 027682 84 GEYCFILRNHPSSYIRGTPEIVISGVTGVEVLAGLHWYLRYW 125 (220)
Q Consensus 84 g~d~F~i~~~~~~~~~g~~kI~I~G~s~vala~Gln~YLK~~ 125 (220)
+.|-|.|...+. ++...|+|.|++...+.+|.+++|+..
T Consensus 84 ~~EGy~l~~~~~---~~~~~lvI~G~~~~G~lYGvf~Ll~~l 122 (139)
T d1l8na2 84 HPEGYVIRSDVD---DGPFRIYIIGKTDAGVLYGVFHFLRLL 122 (139)
T ss_dssp STTCEEEEECCC-----CCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecC---CCceEEEEEecCCchhHHHHHHHHHHH
Confidence 457798875432 221359999999999999999999965
No 3
>d1h41a2 d.92.2.2 (A:5-151) alpha-D-glucuronidase, N-terminal domain {Pseudomonas cellulosa [TaxId: 155077]}
Probab=65.01 E-value=2.6 Score=31.41 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=29.7
Q ss_pred CceeEEEecCCCCCCCCCCeEEEEecCHHHHHHHHHHHHHHhc
Q 027682 84 GEYCFILRNHPSSYIRGTPEIVISGVTGVEVLAGLHWYLRYWC 126 (220)
Q Consensus 84 g~d~F~i~~~~~~~~~g~~kI~I~G~s~vala~Gln~YLK~~c 126 (220)
+.|-|.|..... ++...++|.|++...+.+|.+++|+..-
T Consensus 93 ~~eGy~i~~~~~---~~~~~lvIaG~~~rG~LYG~f~lLr~l~ 132 (147)
T d1h41a2 93 GAEGYLLEQTRI---NKRHVVIVAANSDVGVLYGSFHLLRLIQ 132 (147)
T ss_dssp TTTCEEEEEEEE---TTEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ccCceEEEeecC---CCceEEEEEecCCcchHhHHHHHHHHHH
Confidence 456688875321 2213488999999999999999999773
No 4
>d1jaka2 d.92.2.1 (A:8-150) beta-N-acetylhexosaminidase, N-terminal domain {Streptomyces plicatus [TaxId: 1922]}
Probab=49.26 E-value=17 Score=25.71 Aligned_cols=44 Identities=14% Similarity=0.281 Sum_probs=30.0
Q ss_pred ceEEEEeecCCCCCceeEEEecCCCCCCCCCCeEEEEecCHHHHHHHHHHHHH
Q 027682 71 AFQFRIISKKQCGGEYCFILRNHPSSYIRGTPEIVISGVTGVEVLAGLHWYLR 123 (220)
Q Consensus 71 ~F~~~i~~~~~~~g~d~F~i~~~~~~~~~g~~kI~I~G~s~vala~Gln~YLK 123 (220)
.+.+++... ..+.+.|+|+-.. ++|.|+|++...+.+|+.--+-
T Consensus 72 ~I~l~~~~~--~~~~E~Y~L~I~~-------~~I~I~a~~~~G~~yg~qTL~Q 115 (143)
T d1jaka2 72 GIRLRLAGG--PYGDEGYRLDSGP-------AGVTITARKAAGLFHGVQTLRQ 115 (143)
T ss_dssp SEEEEECCS--TTTTTCEEEEEET-------TEEEEEESSHHHHHHHHHHHHH
T ss_pred cEEEEECCC--CCCCcceEEEEeC-------CeEEEEECCHHHHHHHHHHHHH
Confidence 355665432 2345678887432 4799999999999999877543
No 5
>d2choa3 d.92.2.3 (A:5-126) Glucosaminidase GH84, N-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=27.78 E-value=36 Score=22.95 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=24.6
Q ss_pred CceeEEEecCCCCCCCCCCeEEEEecCHHHHHHHHHHHH
Q 027682 84 GEYCFILRNHPSSYIRGTPEIVISGVTGVEVLAGLHWYL 122 (220)
Q Consensus 84 g~d~F~i~~~~~~~~~g~~kI~I~G~s~vala~Gln~YL 122 (220)
..+.|.|+-. + ++|+|.|++.-.+.+|+.--.
T Consensus 73 ~~E~Y~L~I~-----~--~~I~I~a~~~~G~~yg~qTL~ 104 (122)
T d2choa3 73 HKEGYYLSVN-----E--KEIVLAGNDERGTYYALQTFA 104 (122)
T ss_dssp STTCEEEEEC-----S--SEEEEEESSHHHHHHHHHHHH
T ss_pred CCCceEEEEe-----C--CEEEEEECCHHHHHHHHHHHH
Confidence 3456888743 2 479999999999999987654
No 6
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]}
Probab=27.05 E-value=9.4 Score=30.44 Aligned_cols=39 Identities=13% Similarity=0.383 Sum_probs=33.6
Q ss_pred eeecccccCCccccc---------cChhhHhhhHhHHHhcCCCc---cccc
Q 027682 166 NYYQNAVTSSYTFAW---------WDWKRWEKEIDWMALQGINL---PLAF 204 (220)
Q Consensus 166 RYy~N~cTfsYS~aw---------WdW~rWErEIDWMAL~GINl---pLA~ 204 (220)
.-++|..|....|-| |||++.-+-++|..-||+.+ +|.+
T Consensus 34 ~~~fn~~t~~n~~kW~~~ep~~G~~~~~~~D~~v~~a~~~gi~v~gh~l~w 84 (302)
T d1nq6a_ 34 DAQFGSVTPENEMKWDAVESSRNSFSFSAADRIVSHAQSKGMKVRGHTLVW 84 (302)
T ss_dssp HHHCSEEEESSTTSHHHHCSBTTBCCCHHHHHHHHHHHHHTCEEEEEEEEE
T ss_pred HHhCCeeeeccCccchhhcCCCCcCCcHHHHHHHHHHHHCCCEEEeecccc
Confidence 446999999999988 99999999999999999986 4544
No 7
>d1qbaa4 d.92.2.1 (A:201-337) Bacterial chitobiase, Domain 2 {Serratia marcescens [TaxId: 615]}
Probab=26.96 E-value=89 Score=21.28 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=25.3
Q ss_pred CceeEEEecCCCCCCCCCCeEEEEecCHHHHHHHHHHHHH
Q 027682 84 GEYCFILRNHPSSYIRGTPEIVISGVTGVEVLAGLHWYLR 123 (220)
Q Consensus 84 g~d~F~i~~~~~~~~~g~~kI~I~G~s~vala~Gln~YLK 123 (220)
..+.|+|+-.+ ++|+|+|++...+.+|+.--+-
T Consensus 85 ~~E~Y~L~i~~-------~~I~I~a~~~~G~~yglqTL~Q 117 (137)
T d1qbaa4 85 VSGAYELKIGK-------KEAQVIGFDQAGVFYGLQSILS 117 (137)
T ss_dssp STTCEEEEECS-------SCEEEEESSHHHHHHHHHHHHH
T ss_pred CCcceEEEEeC-------CeEEEEECCHHHHHHHHHHHHH
Confidence 45678887432 3699999999999999977544
No 8
>d2gjxa2 d.92.2.1 (A:23-166) beta-hexosaminidase A {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.68 E-value=35 Score=23.27 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=25.2
Q ss_pred ceeEEEecCCCCCCCCCCeEEEEecCHHHHHHHHHHHHH
Q 027682 85 EYCFILRNHPSSYIRGTPEIVISGVTGVEVLAGLHWYLR 123 (220)
Q Consensus 85 ~d~F~i~~~~~~~~~g~~kI~I~G~s~vala~Gln~YLK 123 (220)
.+.|+|+-. . ++|.|+|++...+.+|+.-.+-
T Consensus 91 ~EsY~L~I~-----~--~~i~I~a~~~~G~~ygl~TL~Q 122 (144)
T d2gjxa2 91 VENYTLTIN-----D--DQCLLLSETVWGALRGLETFSQ 122 (144)
T ss_dssp CCCEEEEES-----S--SCEEEEESSHHHHHHHHHHHHH
T ss_pred CCCeEEEEc-----C--CeEEEEECCHHHHHHHHHHHHH
Confidence 467888743 2 4799999999999999987654
No 9
>d2cbia3 d.92.2.3 (A:41-178) Hyaluronidase N-terminal domain {Clostridium perfringens [TaxId: 1502]}
Probab=25.39 E-value=34 Score=23.49 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=25.1
Q ss_pred CceeEEEecCCCCCCCCCCeEEEEecCHHHHHHHHHHHH
Q 027682 84 GEYCFILRNHPSSYIRGTPEIVISGVTGVEVLAGLHWYL 122 (220)
Q Consensus 84 g~d~F~i~~~~~~~~~g~~kI~I~G~s~vala~Gln~YL 122 (220)
+.+.|+|+-. + ++|+|+|++..++.+|+.-.+
T Consensus 89 ~~E~Y~L~i~-----~--~~I~I~a~~~~G~~yglqTL~ 120 (138)
T d2cbia3 89 KEEGYALVSN-----D--GKIAIEGKDGDGTFYGVQTFK 120 (138)
T ss_dssp CTTCEEEEEE-----T--TEEEEEESSHHHHHHHHHHHH
T ss_pred CCcceEEEEe-----C--CEEEEEEcCHHHHHHHHHHHH
Confidence 3567888743 2 479999999999999987655
No 10
>d1nowa2 d.92.2.1 (A:55-199) beta-hexosaminidase B, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.41 E-value=47 Score=22.73 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=24.6
Q ss_pred ceeEEEecCCCCCCCCCCeEEEEecCHHHHHHHHHHHHH
Q 027682 85 EYCFILRNHPSSYIRGTPEIVISGVTGVEVLAGLHWYLR 123 (220)
Q Consensus 85 ~d~F~i~~~~~~~~~g~~kI~I~G~s~vala~Gln~YLK 123 (220)
.+.|+++-. . ++|+|+|++...+-+|+.-..-
T Consensus 92 ~E~Y~L~I~-----~--~~I~I~a~~~~G~~~glqTL~Q 123 (145)
T d1nowa2 92 DESYTLLVK-----E--PVAVLKANRVWGALRGLETFSQ 123 (145)
T ss_dssp CCCEEEEEC-----S--SEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEEEc-----C--CeEEEEECCHHHHHHHHHHHHH
Confidence 367888742 1 4799999999999998877554
No 11
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]}
Probab=23.28 E-value=8.3 Score=30.91 Aligned_cols=37 Identities=16% Similarity=0.409 Sum_probs=31.9
Q ss_pred ecccccCCccccc---------cChhhHhhhHhHHHhcCCCc---cccc
Q 027682 168 YQNAVTSSYTFAW---------WDWKRWEKEIDWMALQGINL---PLAF 204 (220)
Q Consensus 168 y~N~cTfsYS~aw---------WdW~rWErEIDWMAL~GINl---pLA~ 204 (220)
++|..|....|-| |||++-.+-+||..-|||-+ +|.+
T Consensus 38 ~fn~~t~~n~~kW~~iEp~~G~~~~~~~D~~v~~a~~~gi~v~gh~l~W 86 (324)
T d1vbua1 38 EFNILTPENQMKWDTIHPERDRYNFTPAEKHVEFAEENDMIVHGHTLVW 86 (324)
T ss_dssp HCSEEEESSTTSHHHHCCBTTEEECHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred hcCccccccCCchHHhcCCCCccChHHHHHHHHHHHHCCCEEEEecCcc
Confidence 6888899888888 89999999999999999875 5554
No 12
>d1pbya1 a.3.1.7 (A:1-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Paracoccus denitrificans [TaxId: 266]}
Probab=20.45 E-value=23 Score=23.99 Aligned_cols=18 Identities=17% Similarity=0.376 Sum_probs=14.2
Q ss_pred cChhhHhhhHhHH-HhcCC
Q 027682 181 WDWKRWEKEIDWM-ALQGI 198 (220)
Q Consensus 181 WdW~rWErEIDWM-AL~GI 198 (220)
=+=+.|+..|+|| ..+|-
T Consensus 31 ~t~~~W~~~V~~M~~~~Ga 49 (85)
T d1pbya1 31 KTPEGWDMTVTRMMRNHGV 49 (85)
T ss_dssp ECHHHHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHHHcCC
Confidence 4457899999999 57774
No 13
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]}
Probab=20.37 E-value=25 Score=27.02 Aligned_cols=24 Identities=4% Similarity=0.068 Sum_probs=20.5
Q ss_pred cccChhhHhhhHhHHHhcCCCccc
Q 027682 179 AWWDWKRWEKEIDWMALQGINLPL 202 (220)
Q Consensus 179 awWdW~rWErEIDWMAL~GINlpL 202 (220)
.-.+-+++|++|+-|+-+|+|+.=
T Consensus 31 ~~~~~~~~~~~l~~~~~~G~N~iR 54 (344)
T d1qnra_ 31 FLTNHADVDSTFSHISSSGLKVVR 54 (344)
T ss_dssp GCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCHHHHHHHHHHHHhcCCCEEE
Confidence 345779999999999999999853
Done!