BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027685
(220 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 216
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 154/187 (82%), Gaps = 10/187 (5%)
Query: 16 YGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLK 75
YGRRYRSPSPR YGGR RDLPTSLLVRNLRHD CR EDLRGPFG FG LK
Sbjct: 18 YGRRYRSPSPRNRYGGRSRDLPTSLLVRNLRHD----------CRTEDLRGPFGHFGPLK 67
Query: 76 DIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
DIYLPRDYYTGEPRGFGFVQY+DPADAADAK+HMDG +LLGRELTVVFAEENRKKP+EMR
Sbjct: 68 DIYLPRDYYTGEPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMR 127
Query: 136 ARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERS 195
ARER R RSYD +RSP YSRSP Y R YSRSP YYS PR+ SRSISPR RRYRE+S
Sbjct: 128 ARERVRGRSYDRKRSPQCYSRSPRYRRSYSRSPLYYSRSPRQRNYSRSISPRDRRYREQS 187
Query: 196 YSRSPYG 202
+SRSPY
Sbjct: 188 FSRSPYA 194
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/241 (68%), Positives = 177/241 (73%), Gaps = 36/241 (14%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRG--RDLPTSLLVRNLRHDSFSTKTYKSI 58
MRGRSYS PSPPR YGRR RSPSPRG YGGRG RDLPTSLLVRNLRHD
Sbjct: 1 MRGRSYS--PSPPRGYGRRGRSPSPRGRYGGRGSARDLPTSLLVRNLRHD---------- 48
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
CR EDLR PFGQFG LKDIYLPRDYYTGEPRGFGFVQY+DPADAA+AKY MDG +L GRE
Sbjct: 49 CRGEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQILHGRE 108
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS--PHYARGYSRSPDYYSPPPR 176
LTVVFAEENRKKPS+MRARER R R YD RRSP RYSRS P +AR SR DYYSP P+
Sbjct: 109 LTVVFAEENRKKPSDMRARERGRGRFYDRRRSPLRYSRSPPPRHARSPSRGRDYYSPSPK 168
Query: 177 RGRDSRSISPRYRRY----------RERSYSRSP--YGSRS--------YSPSRSRSRSL 216
R + SRS+SP+ RRY R RSY+RSP GSRS SPSR +SRS
Sbjct: 169 RRQYSRSVSPQDRRYSRDRSYTPDGRRRSYTRSPPYNGSRSRSQSPIRGESPSRLQSRSP 228
Query: 217 D 217
D
Sbjct: 229 D 229
>gi|388509350|gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 162/205 (79%), Gaps = 14/205 (6%)
Query: 1 MRGRSYSYSPSPPRDYGRRYR-SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSIC 59
MRGRSYSYSPSPPR YG R R SPSP+G Y GR RDLPTSLLVRNL D+
Sbjct: 1 MRGRSYSYSPSPPRRYGGRRRRSPSPKGRYRGRERDLPTSLLVRNLHRDT---------- 50
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R EDL GPF FG +KD+YLPRDYYTG PRGFGFVQY+DPADAADAKYH+DG +LLGREL
Sbjct: 51 RTEDLHGPFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKYHLDGQILLGREL 110
Query: 120 TVVFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRR 177
TVVFAEENRKKP+EMRARER R RSYD RRSP YSRSP YAR YSRSPD Y+P PRR
Sbjct: 111 TVVFAEENRKKPAEMRARERHSTRERSYDYRRSPRGYSRSPRYARTYSRSPD-YTPSPRR 169
Query: 178 GRDSRSISPRYRRYRERSYSRSPYG 202
R S+SISPR RRY RSYS SPYG
Sbjct: 170 WRYSKSISPRDRRYGRRSYSGSPYG 194
>gi|297746454|emb|CBI16510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/265 (62%), Positives = 177/265 (66%), Gaps = 60/265 (22%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRG--RDLPTSLLVRNLRHDSFSTKTYKSI 58
MRGRSYS PSPPR YGRR RSPSPRG YGGRG RDLPTSLLVRNLRHD
Sbjct: 1 MRGRSYS--PSPPRGYGRRGRSPSPRGRYGGRGSARDLPTSLLVRNLRHD---------- 48
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGE------------------------PRGFGFV 94
CR EDLR PFGQFG LKDIYLPRDYYTGE PRGFGFV
Sbjct: 49 CRGEDLRRPFGQFGPLKDIYLPRDYYTGEIKVLKTSINLEEFQVILKLTLAREPRGFGFV 108
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
QY+DPADAA+AKY MDG +L GRELTVVFAEENRKKPS+MRARER R R YD RRSP RY
Sbjct: 109 QYVDPADAAEAKYQMDGQILHGRELTVVFAEENRKKPSDMRARERGRGRFYDRRRSPLRY 168
Query: 155 SRSP--HYARGYSRSPDYYSPPPRRGRDSRSISPRYRRY----------RERSYSRSP-- 200
SRSP +AR SR DYYSP P+R + SRS+SP+ RRY R RSY+RSP
Sbjct: 169 SRSPPPRHARSPSRGRDYYSPSPKRRQYSRSVSPQDRRYSRDRSYTPDGRRRSYTRSPPY 228
Query: 201 YGSRS--------YSPSRSRSRSLD 217
GSRS SPSR +SRS D
Sbjct: 229 NGSRSRSQSPIRGESPSRLQSRSPD 253
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/237 (66%), Positives = 170/237 (71%), Gaps = 33/237 (13%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSY+ PSPPR YGRR RSPSPRG Y GRGRDLPTSLLVRNL HD CR
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYVGRGRDLPTSLLVRNLSHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
PEDLR PFGQFG +KDIYLP+DYYTGEPRGFGFVQY+DPADAADAK+HMDG +LLGRELT
Sbjct: 49 PEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELT 108
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDGRRSPP--------------RYSRS--PHYARGY 164
VVFAEENRKKPS+MRARER R +D RRSPP RYSRS P +AR
Sbjct: 109 VVFAEENRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRYSRSPAPRHARSR 168
Query: 165 SRSPDYYSPPPRRGRDSRSISPRYR-RYRERSYSRSPYGSRSYSPSRSRSRSLDYSR 220
SRS DY S PP++ SRS+SPR R RERS+ R RSY SRS LD SR
Sbjct: 169 SRSYDYASQPPKQRAYSRSLSPRDRPDSRERSFPRQESRGRSY----SRSPRLDGSR 221
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 154/208 (74%), Gaps = 23/208 (11%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R YSYSPSPPR Y RR RSPSP HYGGRGRDLPTSLLVRNLR D CRPED
Sbjct: 3 RGYSYSPSPPRGYRRRARSPSPHDHYGGRGRDLPTSLLVRNLRRD----------CRPED 52
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR PFGQFGR+KDIYLPRDYYTG+PRGFGFVQY DPADAADAKY+MDG ++LGR++TVVF
Sbjct: 53 LRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVF 112
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGY--SRSPDYYSPPPRRGRDS 181
AEENRKKP EMRAR+R R SYD RR SRSPHY RG SRS Y PP+
Sbjct: 113 AEENRKKPQEMRARDRVRGHSYDDRRYS--RSRSPHYYRGRSPSRSQSYSRSPPQ----- 165
Query: 182 RSISPRYRRYRERSYSRSPYGSRSYSPS 209
+PR+ R RERSYS SP SRS S S
Sbjct: 166 ---NPRH-RLRERSYSGSPVDSRSRSGS 189
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/229 (65%), Positives = 160/229 (69%), Gaps = 26/229 (11%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSY+ PSPPR YGRR RSPSPRG YGGR RDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELT
Sbjct: 49 QEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELT 108
Query: 121 VVFAEENRKKPSEMRARER--------FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYS 172
VVFAEENRKKP+EMRARER R R S R SRS DYYS
Sbjct: 109 VVFAEENRKKPTEMRARERGGGRSSRFRDRRRTPPRYYSRSRSPPRRRDRSRSRSGDYYS 168
Query: 173 PPPRRGRDSRSISPRYRRYR-ERSYSRSPYGS----RSYSPSRSRSRSL 216
PPPRR RSISPR RY RSYSRSP + RS +P+R SR+L
Sbjct: 169 PPPRR-HHPRSISPREERYDGRRSYSRSPASNGSRGRSLTPARGNSRNL 216
>gi|334183335|ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 300
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 154/239 (64%), Positives = 164/239 (68%), Gaps = 36/239 (15%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSY+ PSPPR YGRR RSPSPRG YGGR RDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTG------------EPRGFGFVQYIDPADAADAKYH 108
EDLR F QFG +KDIYLPRDYYTG +PRGFGFVQ++DPADAADAK+H
Sbjct: 49 QEDLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHH 108
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARER-FRSRSYDGRRS-----PPRYSRSPHYAR 162
MDGYLLLGRELTVVFAEENRKKP+EMRARER SR D RR+ S P R
Sbjct: 109 MDGYLLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRRRTPPRYYSRSRSPPPRRGR 168
Query: 163 GYSRSPDYYSPPPRRGRDSRSISPRYRRYR-ERSYSRSPYG----SRSYSPSRSRSRSL 216
SRS DYYSPPPRR RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 169 SRSRSGDYYSPPPRR-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 226
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
gi|194700100|gb|ACF84134.1| unknown [Zea mays]
gi|219887871|gb|ACL54310.1| unknown [Zea mays]
gi|224035011|gb|ACN36581.1| unknown [Zea mays]
gi|238908719|gb|ACF81490.2| unknown [Zea mays]
gi|448878248|gb|AGE46087.1| arginine/serine-rich splicing factor SCL25B transcript IV [Zea
mays]
Length = 209
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 149/206 (72%), Gaps = 19/206 (9%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R YSYSPSPPR Y RR RSPSP HYGGRGRDLPTSLLVRNLR D CRPED
Sbjct: 3 RGYSYSPSPPRGYRRRARSPSPHDHYGGRGRDLPTSLLVRNLRRD----------CRPED 52
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR PFGQFGR+KDIYLPRDYYTG+PRGFGFVQY DPADAADAKY+MDG ++LGR++TVVF
Sbjct: 53 LRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVF 112
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRS 183
AEENRKKP EMRAR+R R SYD RR S + R SRS Y PP+
Sbjct: 113 AEENRKKPQEMRARDRVRGHSYDDRRYSRSRSPRYYRGRSPSRSQSYSRSPPQ------- 165
Query: 184 ISPRYRRYRERSYSRSPYGSRSYSPS 209
+PR+ R RERSYS SP SRS S S
Sbjct: 166 -NPRH-RLRERSYSGSPVDSRSRSGS 189
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 153/226 (67%), Positives = 163/226 (72%), Gaps = 23/226 (10%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSY+ PSPPR YGRR RSPSPRG YGGR RDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELT
Sbjct: 49 QEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELT 108
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDGRRS-----PPRYSRSPHYARGYSRSPDYYSPPP 175
VVFAEENRKKP+EMRARER R D RR+ S P R SRS DYYSPPP
Sbjct: 109 VVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPP 168
Query: 176 RRGRDSRSISPRYRRYR-ERSYSRSPYGS----RSYSPSRSRSRSL 216
RR RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 169 RR-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 153/226 (67%), Positives = 163/226 (72%), Gaps = 23/226 (10%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSY+ PSPPR YGRR RSPSPRG YGGR RDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELT
Sbjct: 49 QEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELT 108
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDGRRS-----PPRYSRSPHYARGYSRSPDYYSPPP 175
VVFAEENRKKP+EMRARER R D RR+ S P R SRS DYYSPPP
Sbjct: 109 VVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPP 168
Query: 176 RRGRDSRSISPRYRRYR-ERSYSRSPYGS----RSYSPSRSRSRSL 216
RR RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 169 RR-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 153/226 (67%), Positives = 163/226 (72%), Gaps = 23/226 (10%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSY+ PSPPR YGRR RSPSPRG YGGR RDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELT
Sbjct: 49 QEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELT 108
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDGRRS-----PPRYSRSPHYARGYSRSPDYYSPPP 175
VVFAEENRKKP+EMRARER R D RR+ S P R SRS DYYSPPP
Sbjct: 109 VVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPP 168
Query: 176 RRGRDSRSISPRYRRYR-ERSYSRSPYGS----RSYSPSRSRSRSL 216
RR RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 169 RR-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 153/226 (67%), Positives = 163/226 (72%), Gaps = 23/226 (10%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSY+ PSPPR YGRR RSPSPRG YGGR RDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
EDLR F QFG +KDIYLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDGYLLLGRELT
Sbjct: 49 QEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELT 108
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDGRRS-----PPRYSRSPHYARGYSRSPDYYSPPP 175
VVFAEENRKKP+EMRARER R D RR+ S P R SRS DYYSPPP
Sbjct: 109 VVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPP 168
Query: 176 RRGRDSRSISPRYRRYR-ERSYSRSPYGS----RSYSPSRSRSRSL 216
RR RSISPR RY RSYSRSP RS +P R +SRSL
Sbjct: 169 RR-HHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSL 213
>gi|359487440|ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
Length = 225
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 151/202 (74%), Positives = 162/202 (80%), Gaps = 14/202 (6%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSYS PSPPR Y RR RSPSPRG +GGRGRDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYS--PSPPRGYSRRGRSPSPRGRHGGRGRDLPTSLLVRNLRHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
PEDLR PFGQFG LKDIYLPRDYYTGEPRGFGFVQY+DPADAA+AKY MDG +LLGRELT
Sbjct: 49 PEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQVLLGRELT 108
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRD 180
VVFAEENRK+P +MRARER R R D RRSPPRYSRSP YAR SRSP++Y P PRR
Sbjct: 109 VVFAEENRKRPVDMRARERTRGRPSDRRRSPPRYSRSPRYARSRSRSPNHYPPSPRRRHY 168
Query: 181 SRSISPR-YRRYR-ERSYSRSP 200
SRS+SP+ RRY E+ YS SP
Sbjct: 169 SRSVSPQDKRRYSGEQPYSASP 190
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195645762|gb|ACG42349.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 149/206 (72%), Gaps = 19/206 (9%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R YSYSPSPPR Y RR RSPSP HYGGRGRDLPTSLLVRNLR D CRPED
Sbjct: 3 RGYSYSPSPPRGYRRRARSPSPHDHYGGRGRDLPTSLLVRNLRRD----------CRPED 52
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR PFGQFGR+KDIYLPRDYYTG+PRGFGFVQY DPADAADAKY+MDG ++LGR++TVVF
Sbjct: 53 LRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVF 112
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRS 183
AEENRKKP EMRAR+R R SYD RR S + R SRS Y PP+
Sbjct: 113 AEENRKKPQEMRARDRVRGHSYDDRRYSRSRSPRYYRGRSPSRSQSYSRSPPQ------- 165
Query: 184 ISPRYRRYRERSYSRSPYGSRSYSPS 209
+PR+ R RERSYS SP SRS S S
Sbjct: 166 -NPRH-RLRERSYSGSPVDSRSRSGS 189
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 137/225 (60%), Positives = 155/225 (68%), Gaps = 22/225 (9%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGG-RGRDLPTSLLVRNLRHDSFSTKTYKSIC 59
MRGRSY+ PSPPR YGRR RSPSPRG +GG R DLPTSLLVRNLRHD C
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHD----------C 48
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R EDLR PF QFG +KDIYLPRDYYTG+PRGFGF+Q++DPADAA+AK+ MDGYLLLGREL
Sbjct: 49 RQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGREL 108
Query: 120 TVVFAEENRKKPSEMRARER----FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPP 175
TVVFAEENRKKP+EMR R+R R + S P R Y+ PP
Sbjct: 109 TVVFAEENRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPP 168
Query: 176 RRGRDSRSISPRYRRY-RERSYSRSP--YGS--RSYSPSRSRSRS 215
+ SRS+SP+ RRY +ERSYSRSP GS RS SP R +S S
Sbjct: 169 AKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHS 213
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/225 (62%), Positives = 158/225 (70%), Gaps = 23/225 (10%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGG-RGRDLPTSLLVRNLRHDSFSTKTYKSIC 59
MRGRSY+ PSPPR YGRR RSPSPRG +GG R DLPTSLLVRNLRHD C
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHD----------C 48
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R EDLR PF QFG +KDIYLPRDYYTG+PRGFGF+Q++DPADAA+AK+ MDGYLLLGREL
Sbjct: 49 RQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGREL 108
Query: 120 TVVFAEENRKKPSEMRARER----FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPP 175
TVVFAEENRKKP+EMR R+R R + S R SRS Y SPP
Sbjct: 109 TVVFAEENRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPRRGRRSRSRSCGYNSPPA 168
Query: 176 RRGRDSRSISPRYRRY-RERSYSRSP--YGS--RSYSPSRSRSRS 215
+R SRS+SP+ RRY +ERSYSRSP GS RS SP R +S S
Sbjct: 169 KR-HQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHS 212
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/225 (63%), Positives = 158/225 (70%), Gaps = 22/225 (9%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGG-RGRDLPTSLLVRNLRHDSFSTKTYKSIC 59
MRGRSY+ PSPPR YGRR RSPSPRG YGG R RDLPTSLLVRNLRHD C
Sbjct: 1 MRGRSYT--PSPPRGYGRRGRSPSPRGRYGGSRDRDLPTSLLVRNLRHD----------C 48
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R EDLR PF QFG +KDIYLPRDYYTG+PRGFGF+QY+DPADAA+AK+HMDG LLGREL
Sbjct: 49 RQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMDGSHLLGREL 108
Query: 120 TVVFAEENRKKPSEMRARERF-RSRSYDGRRSPPRYSRSPHYARGYSRSPDY---YSPPP 175
TVVFAEENRKKP+EMR R+R RS ++ RR P R RS Y P
Sbjct: 109 TVVFAEENRKKPTEMRTRDRGGRSNRFNDRRRSPPRYSRSPPPRRGRRSRSRSRGYDSPS 168
Query: 176 RRGRDSRSISPRYRRY-RERSYSRSP--YGS--RSYSPSRSRSRS 215
+ SRS+SP+ RRY +ERSYSRSP GS RS SP R +S S
Sbjct: 169 AKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRIRSGSPGRVKSHS 213
>gi|357121831|ref|XP_003562621.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 205
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/193 (64%), Positives = 133/193 (68%), Gaps = 28/193 (14%)
Query: 19 RYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIY 78
R RSPSPR Y GRGRDLPTSLLVRNLR D CRPEDLR PFGQFGRLKD+Y
Sbjct: 19 RARSPSPRVRYVGRGRDLPTSLLVRNLRRD----------CRPEDLRRPFGQFGRLKDVY 68
Query: 79 LPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
+PRDYYT EPRGFGFVQY DP DAADAKY+MDG ++LGRE+ VVFA+ENRK PSEMR RE
Sbjct: 69 IPRDYYTREPRGFGFVQYFDPEDAADAKYYMDGQVVLGREIAVVFAQENRKHPSEMRTRE 128
Query: 139 RFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRY--RRYRERSY 196
R RSYD RRS RSP R YSRSP SPRY RR+RE SY
Sbjct: 129 SSRGRSYDRRRSLSPRGRSPFRGRSYSRSP----------------SPRYERRRFREDSY 172
Query: 197 SRSPYGSRSYSPS 209
SRSP RS S S
Sbjct: 173 SRSPVDGRSRSGS 185
>gi|326532152|dbj|BAK01452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 144/210 (68%), Gaps = 29/210 (13%)
Query: 4 RSYSYSPSPP-RDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPE 62
R YSYSPSPP R Y R RSPSPR Y GRGRDLPTSLLVRNLR D CRP+
Sbjct: 3 RGYSYSPSPPPRGYRGRARSPSPRDRYDGRGRDLPTSLLVRNLRRD----------CRPD 52
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DLR PF QFGRLKD+Y+PRDYYT EPRGFGFVQY DP DAADAKY+MDG ++LGRE+ VV
Sbjct: 53 DLRRPFAQFGRLKDVYIPRDYYTQEPRGFGFVQYFDPDDAADAKYYMDGQVILGREVAVV 112
Query: 123 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSR 182
FA+ENRKKP+EMR RE R RSYD R SP R + R YSRSP SP P R
Sbjct: 113 FAQENRKKPAEMRTRESSRGRSYDQRHSPSPRGRPSYRGRSYSRSP---SPRPAR----- 164
Query: 183 SISPRYRRYRERS--YSRSPY--GSRSYSP 208
RR+R+ S SRSP GSRS SP
Sbjct: 165 ------RRFRDESPLRSRSPVDSGSRSVSP 188
>gi|224139940|ref|XP_002323350.1| predicted protein [Populus trichocarpa]
gi|222867980|gb|EEF05111.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/141 (80%), Positives = 124/141 (87%), Gaps = 10/141 (7%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSYSYSPSPPR YGR++RSPSPRG +GGRGRDLPTSLLVRNLR D CR
Sbjct: 1 MRGRSYSYSPSPPRGYGRKHRSPSPRGRHGGRGRDLPTSLLVRNLRLD----------CR 50
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
PEDLRGPFG+FG LKD+YLPRDYYTGEPRGFGFVQY++PADAADAK+HMDG +L GRELT
Sbjct: 51 PEDLRGPFGRFGPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKHHMDGEILFGRELT 110
Query: 121 VVFAEENRKKPSEMRARERFR 141
VVFAEENRKKP+EMRAR+R R
Sbjct: 111 VVFAEENRKKPAEMRARDRVR 131
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/138 (77%), Positives = 115/138 (83%), Gaps = 10/138 (7%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R YSYSPSPPR Y R RSPSPR +YGGRGRDLPTSLLVRNLR D CRPED
Sbjct: 3 RGYSYSPSPPRGYRRSERSPSPRDYYGGRGRDLPTSLLVRNLRRD----------CRPED 52
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR PFGQFGRLKDIYLPRDYYTGEPRGFGFVQY +P DAADAKY+MDG ++LGR++TVVF
Sbjct: 53 LRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYEPDDAADAKYYMDGQVVLGRQITVVF 112
Query: 124 AEENRKKPSEMRARERFR 141
AEENRKKP EMRAR+R R
Sbjct: 113 AEENRKKPQEMRARDRVR 130
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/138 (78%), Positives = 115/138 (83%), Gaps = 10/138 (7%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPE 62
GR Y Y PSPPR+Y RR RSPSPRG YGGR RDLPTSLLVRNLR D CRP+
Sbjct: 9 GRGYDYGPSPPREYRRRARSPSPRGRYGGRDRDLPTSLLVRNLRRD----------CRPD 58
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DLR PFG+FGR+KDIYLPRDYYTGEPRGFGF+QY DP DAADAKYHMDG +LLGRE+TVV
Sbjct: 59 DLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVV 118
Query: 123 FAEENRKKPSEMRARERF 140
FAEENRKKPSEMRARER
Sbjct: 119 FAEENRKKPSEMRARERV 136
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/138 (78%), Positives = 115/138 (83%), Gaps = 10/138 (7%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPE 62
GR Y Y PSPPR+Y RR RSPSPRG YGGR RDLPTSLLVRNLR D CRP+
Sbjct: 2 GRGYDYGPSPPREYRRRARSPSPRGRYGGRDRDLPTSLLVRNLRRD----------CRPD 51
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DLR PFG+FGR+KDIYLPRDYYTGEPRGFGF+QY DP DAADAKYHMDG +LLGRE+TVV
Sbjct: 52 DLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVV 111
Query: 123 FAEENRKKPSEMRARERF 140
FAEENRKKPSEMRARER
Sbjct: 112 FAEENRKKPSEMRARERV 129
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/138 (78%), Positives = 115/138 (83%), Gaps = 10/138 (7%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPE 62
GR Y Y PSPPR+Y RR RSPSPRG YGGR RDLPTSLLVRNLR D CRP+
Sbjct: 2 GRGYDYGPSPPREYRRRARSPSPRGRYGGRDRDLPTSLLVRNLRRD----------CRPD 51
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DLR PFG+FGR+KDIYLPRDYYTGEPRGFGF+QY DP DAADAKYHMDG +LLGRE+TVV
Sbjct: 52 DLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVV 111
Query: 123 FAEENRKKPSEMRARERF 140
FAEENRKKPSEMRARER
Sbjct: 112 FAEENRKKPSEMRARERV 129
>gi|449437540|ref|XP_004136550.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449516345|ref|XP_004165207.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 210
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/202 (69%), Positives = 152/202 (75%), Gaps = 16/202 (7%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSYSYSPSPPR YGRRYRSPS GGR RDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYSYSPSPPRSYGRRYRSPS-PRGRGGRRRDLPTSLLVRNLRHD----------CR 49
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
PEDLRG FG+FG LKDIYLPRDYY+GEPRGFGFVQ++D ADAADAKY +DG +LLG ELT
Sbjct: 50 PEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYELDGQVLLGHELT 109
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDG--RRSPPRYSRSPHYARGYSRSPDYYSPPPRRG 178
VVFAEENRK+P EMRAR+ R RSY R SP RYS+SPHY R YSR P+YYSP R
Sbjct: 110 VVFAEENRKRPEEMRARDSSRGRSYSYSHRHSPLRYSQSPHYDRKYSRCPEYYSPARSRR 169
Query: 179 RDSRSISPRYRRYRERSYSRSP 200
P RYRE+SYSRSP
Sbjct: 170 YSRSPRGP---RYREQSYSRSP 188
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/220 (58%), Positives = 142/220 (64%), Gaps = 32/220 (14%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGH-----YGGRGRDLPTSLLVRNLRHDSFSTKTY 55
MRGRSYS PSPP Y RR R Y R DLPTSLLVRNLRHD
Sbjct: 1 MRGRSYS--PSPPPRYSRRGGGGGGRSPSPRRRYAPRQSDLPTSLLVRNLRHD------- 51
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 115
CRPEDLR PFG FG LKDIYLP+DYYTG+PRGFGF+Q++DPADAADAKYHMDG +LL
Sbjct: 52 ---CRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYHMDGQVLL 108
Query: 116 GRELTVVFAEENRKKPSEMRARERFRSRSYD-------GRRSPPRYSRSPHYARGYSRSP 168
GRE+TVVFAEENRKKP+EMR RER R D RSP P + S
Sbjct: 109 GREITVVFAEENRKKPTEMRVRERSSGRHSDRRRSPPRYSRSPRYSRSPPRHRSRSRGSR 168
Query: 169 DYYSPPPRRGRDSRSISPRYRRY--------RERSYSRSP 200
DY+SPPP+R SRS+SP RR+ RERSYSRSP
Sbjct: 169 DYHSPPPKRREYSRSVSPEDRRHSREGSQHSRERSYSRSP 208
>gi|224052944|ref|XP_002297637.1| predicted protein [Populus trichocarpa]
gi|222844895|gb|EEE82442.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 115/170 (67%), Gaps = 43/170 (25%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
MRGRSYS PSPPR YGRR RSPSPRG YGGR RDLPTSLLVRNLRHD CR
Sbjct: 1 MRGRSYS--PSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHD----------CR 48
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTG-------------------------------EPR 89
PEDLR PF QFG LKDIYLPRDYYTG EPR
Sbjct: 49 PEDLRRPFEQFGALKDIYLPRDYYTGSFEDDVNDSEDLKEVGFEYIVKRFQVLKSFKEPR 108
Query: 90 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
GFGFVQ+ DP DAA+AK+HMDG +LLGRELTVVFAEENRKKP +MR RER
Sbjct: 109 GFGFVQFADPHDAAEAKHHMDGRVLLGRELTVVFAEENRKKPMDMRTRER 158
>gi|212723388|ref|NP_001131976.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|194693082|gb|ACF80625.1| unknown [Zea mays]
gi|195620736|gb|ACG32198.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|413955616|gb|AFW88265.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878236|gb|AGE46081.1| arginine/serine-rich splicing factor SCL25A transcript I [Zea mays]
Length = 216
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/221 (61%), Positives = 153/221 (69%), Gaps = 25/221 (11%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRG--RDLPTSLLVRNLRHDSFSTKTYKSICR 60
GRSY++SPSPPR Y RR RSPSPRG YGGR RDLPTSLLVRNLR D CR
Sbjct: 2 GRSYNHSPSPPRGYRRRTRSPSPRGRYGGRDTDRDLPTSLLVRNLRRD----------CR 51
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
P+DLR PFG+FG +KDIYLP+DYYT EPRGFGF+QY DP DA+DAKY+MDG +LLGRE+
Sbjct: 52 PDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDAKYYMDGKMLLGREIA 111
Query: 121 VVFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHY----ARGYSRSPDYYSPP 174
VVFAEENRKKPS+MRARE+ R RSYDGR SRSP YSP
Sbjct: 112 VVFAEENRKKPSDMRAREKISGRGRSYDGRLR----SRSPGLNGSPRGRSRSQSRSYSPA 167
Query: 175 PRRGRDSRSISPRYRRYRERSYSRSPYGSRSYSPSRSRSRS 215
P+R SRS +P R RERS SRSP +RS S S SRS
Sbjct: 168 PKRKHYSRSPAP---RPRERSLSRSPAVNRSRSASPIVSRS 205
>gi|242046420|ref|XP_002461081.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|241924458|gb|EER97602.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|448878346|gb|AGE46136.1| arginine/serine-rich splicing factor SCL25B transcript I [Sorghum
bicolor]
gi|448878348|gb|AGE46137.1| arginine/serine-rich splicing factor SCL25B transcript II [Sorghum
bicolor]
Length = 209
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/138 (78%), Positives = 116/138 (84%), Gaps = 10/138 (7%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R YSYSPSPPR Y RR RSPSPR +YGGRGRDLPTSLLVRNLR D CRPED
Sbjct: 3 RGYSYSPSPPRGYRRRERSPSPRDYYGGRGRDLPTSLLVRNLRRD----------CRPED 52
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR PFGQFGRLKDIYLPRDYYTGEPRGFGFVQY DP DAADAKY+MDG ++LGR++TVVF
Sbjct: 53 LRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITVVF 112
Query: 124 AEENRKKPSEMRARERFR 141
AEENRKKP EMRAR+R R
Sbjct: 113 AEENRKKPQEMRARDRVR 130
>gi|448878352|gb|AGE46139.1| arginine/serine-rich splicing factor SCL25B transcript IV [Sorghum
bicolor]
Length = 174
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/139 (78%), Positives = 116/139 (83%), Gaps = 10/139 (7%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R YSYSPSPPR Y RR RSPSPR +YGGRGRDLPTSLLVRNLR D CRPED
Sbjct: 3 RGYSYSPSPPRGYRRRERSPSPRDYYGGRGRDLPTSLLVRNLRRD----------CRPED 52
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR PFGQFGRLKDIYLPRDYYTGEPRGFGFVQY DP DAADAKY+MDG ++LGR++TVVF
Sbjct: 53 LRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITVVF 112
Query: 124 AEENRKKPSEMRARERFRS 142
AEENRKKP EMRAR+R R
Sbjct: 113 AEENRKKPQEMRARDRVRG 131
>gi|358248974|ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycine max]
gi|255645650|gb|ACU23319.1| unknown [Glycine max]
Length = 205
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 127/172 (73%), Gaps = 21/172 (12%)
Query: 22 SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPR 81
S SPRG Y G RDLPTSLLVRNL D CRPEDL GPFGQFG LKD+YLPR
Sbjct: 24 SLSPRGRYRGCDRDLPTSLLVRNLNRD----------CRPEDLHGPFGQFGPLKDVYLPR 73
Query: 82 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFR 141
DYYTGEPRGFGFVQY+DPADAADAKYHMDG +LLGRE+TVVFAEENRKKP+EMRARE R
Sbjct: 74 DYYTGEPRGFGFVQYVDPADAADAKYHMDGRILLGREITVVFAEENRKKPAEMRAREHRR 133
Query: 142 SRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRE 193
RS+D RRS SR+ + YS S PRR R RSISPR R+YR+
Sbjct: 134 DRSHDYRRS----SRTYSPSPDYSPS-------PRRRRHYRSISPRDRKYRD 174
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/158 (68%), Positives = 116/158 (73%), Gaps = 29/158 (18%)
Query: 22 SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPR 81
SP PR YGGRGRDLPTSLLVRNLR D CRPEDLR PFGQFGRLKDIY+PR
Sbjct: 197 SPIPRDRYGGRGRDLPTSLLVRNLRRD----------CRPEDLRRPFGQFGRLKDIYIPR 246
Query: 82 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF- 140
DYY+GEPRGFGFVQY DP DAADAKY+MDG ++LGRE+ VVFAEENRKKPSEMR+R+R
Sbjct: 247 DYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMRSRDRIS 306
Query: 141 --RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPR 176
R RSYD RYSRSP YSPPPR
Sbjct: 307 GSRGRSYD-----QRYSRSPR-----------YSPPPR 328
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/158 (68%), Positives = 116/158 (73%), Gaps = 29/158 (18%)
Query: 22 SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPR 81
SP PR YGGRGRDLPTSLLVRNLR D CRPEDLR PFGQFGRLKDIY+PR
Sbjct: 25 SPIPRDRYGGRGRDLPTSLLVRNLRRD----------CRPEDLRRPFGQFGRLKDIYIPR 74
Query: 82 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF- 140
DYY+GEPRGFGFVQY DP DAADAKY+MDG ++LGRE+ VVFAEENRKKPSEMR+R+R
Sbjct: 75 DYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMRSRDRIS 134
Query: 141 --RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPR 176
R RSYD RYSRSP YSPPPR
Sbjct: 135 GSRGRSYD-----QRYSRSPR-----------YSPPPR 156
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/158 (68%), Positives = 116/158 (73%), Gaps = 29/158 (18%)
Query: 22 SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPR 81
SP PR YGGRGRDLPTSLLVRNLR D CRPEDLR PFGQFGRLKDIY+PR
Sbjct: 22 SPIPRDRYGGRGRDLPTSLLVRNLRRD----------CRPEDLRRPFGQFGRLKDIYIPR 71
Query: 82 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF- 140
DYY+GEPRGFGFVQY DP DAADAKY+MDG ++LGRE+ VVFAEENRKKPSEMR+R+R
Sbjct: 72 DYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMRSRDRIS 131
Query: 141 --RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPR 176
R RSYD RYSRSP YSPPPR
Sbjct: 132 GSRGRSYD-----QRYSRSPR-----------YSPPPR 153
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 132/195 (67%), Gaps = 29/195 (14%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
+DLPTSLLVRNLRHD CRPEDLR PFGQFG LKDIYLP+DYYTGEPRGFGF
Sbjct: 37 QDLPTSLLVRNLRHD----------CRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGF 86
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE------RFRSRSYDG 147
VQY+DPADAADAKYHMDG +LLGRELTVVFAEENRKKP+EMR RE R
Sbjct: 87 VQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFYDRRRSPPRY 146
Query: 148 RRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRY----------RERSYS 197
RSP P R SRS DYYSPP +R SRS+SP RRY RERSYS
Sbjct: 147 SRSPRYSRSPPPRHRSRSRSRDYYSPPAKRREYSRSVSPEDRRYSRERSFSQHSRERSYS 206
Query: 198 RSP---YGSRSYSPS 209
RSP GSRS S S
Sbjct: 207 RSPPYNGGSRSRSQS 221
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 152/208 (73%), Gaps = 31/208 (14%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPE 62
GRSY YSPSPPR Y RR RSPSPRG YGGRGRDLPTSLLVRNLR D CRP+
Sbjct: 2 GRSYDYSPSPPRGYRRRTRSPSPRGRYGGRGRDLPTSLLVRNLRRD----------CRPD 51
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DLR PFG+FGR+KDIYLP+DYYT EP+GFGF+QY DP DA+DAKYHMDG +LLGRE+TVV
Sbjct: 52 DLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQYFDPEDASDAKYHMDGQMLLGREITVV 111
Query: 123 FAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHYARGYSRSP--------DYYS 172
FAEENRKKPS+MRARER RSRSYD R SRSP GYS SP +S
Sbjct: 112 FAEENRKKPSDMRARERMSGRSRSYDRRLR----SRSP----GYSDSPRGRSRSHSPSHS 163
Query: 173 PPPRRGRDSRSISPRYRRYRERSYSRSP 200
P P+R SRS SP R RERS SRSP
Sbjct: 164 PAPKRKHYSRSPSP---RPRERSMSRSP 188
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 137/221 (61%), Gaps = 33/221 (14%)
Query: 1 MRGRSYSYSPSPPRDYGRRYRSPSPRGHYGGR-----GRDLPTSLLVRNLRHDSFSTKTY 55
MRGRSYS PSPP + RR G +DLPTSLLVRNLRHD
Sbjct: 1 MRGRSYS--PSPPPRHSRRGGGGRSPSPRGRYPPRPRQQDLPTSLLVRNLRHD------- 51
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 115
CRPEDLR PFGQFG LKDIYLP+DYYTGEPRGFGFVQY+DPADAADAKYHMDG +LL
Sbjct: 52 ---CRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLL 108
Query: 116 GRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSP------D 169
GRELTVVFAEENRKKP+EMR RER R P + R D
Sbjct: 109 GRELTVVFAEENRKKPTEMRTRERRGRFYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRD 168
Query: 170 YYSPPPRRGRDSRSISPRYRRY----------RERSYSRSP 200
YYSPP +R SRS+SP RRY RERSYSRSP
Sbjct: 169 YYSPPAKRREYSRSVSPEDRRYSRERSFSQHSRERSYSRSP 209
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 139/217 (64%), Gaps = 47/217 (21%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
+DLPTSLLVRNLRHD CRPEDLR PFGQFG LKDIYLP+DYYTGEPRGFGF
Sbjct: 37 QDLPTSLLVRNLRHD----------CRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGF 86
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE--------------R 139
VQ++DPADAADAKYHMDG +LLGRELTVVFAEENRKKP+EMR RE
Sbjct: 87 VQFVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFSDRRRSPPRY 146
Query: 140 FRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRY-------- 191
RS Y R H +R +SR DYYS P+R SRS+SP RRY
Sbjct: 147 SRSPRYSRSPRYSRSPPPRHRSRSHSR--DYYS--PKRREYSRSVSPEGRRYSRERSYSQ 202
Query: 192 --RERSYSRSP---YGSRSYS------PSRSRSRSLD 217
RERS+SRSP GSRS S P RSRS SL+
Sbjct: 203 HNRERSFSRSPPYNGGSRSRSQSPAKGPGRSRSPSLN 239
>gi|357112219|ref|XP_003557907.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 219
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 147/216 (68%), Gaps = 19/216 (8%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPE 62
GRSY YSPSPPR Y RR RSPSPRG YGGRGRDLPTSLLVRNLR D CRP+
Sbjct: 2 GRSYDYSPSPPRGYRRRGRSPSPRGRYGGRGRDLPTSLLVRNLRRD----------CRPD 51
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DLR PFG+FGRLKDIYLPRDYYT EPRGFGF+QY DP DAADA+YHMDG +LLGRE+ VV
Sbjct: 52 DLRRPFGKFGRLKDIYLPRDYYTQEPRGFGFIQYYDPEDAADAQYHMDGQILLGREVAVV 111
Query: 123 FAEENRKKPSEMRARERF----RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRG 178
FAEENRKKP EMR RER RS R S SP Y+ SP P+R
Sbjct: 112 FAEENRKKPFEMRTRERTSSRGRSYDRRSRSPRRGRSVSPGYSDRSRSRSQSKSPAPKRK 171
Query: 179 RDSRSISPRYRRYRERSYSRSPYGSRSYSPSRSRSR 214
SRS + +RERS+SRSP SRS S S S R
Sbjct: 172 HHSRSPA-----HRERSFSRSPADSRSRSGSPSEDR 202
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/160 (69%), Positives = 120/160 (75%), Gaps = 12/160 (7%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
DLPTSLLVRNLRHD CRPEDLR PF QFG LKDIYLPRDYYTGEPRGFGFV
Sbjct: 39 DLPTSLLVRNLRHD----------CRPEDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFV 88
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM-RARERFRSRSYDGRRSPPR 153
QY DP DAA+AK+HMDG +LLGRELTVVFAEENRKKP +M R R D RRSPPR
Sbjct: 89 QYADPQDAAEAKHHMDGRVLLGRELTVVFAEENRKKPVDMRARERAGRGRFRDRRRSPPR 148
Query: 154 YSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRE 193
YSRSP SRS DY SPPP+R R S+SISP+ +RY +
Sbjct: 149 YSRSPPPRYARSRSHDYGSPPPKR-RYSKSISPQGKRYSQ 187
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 125/203 (61%), Gaps = 37/203 (18%)
Query: 9 SPSPPR-DYGRRYRSPSPRGHYGGRGRDLP-TSLLVRNLRHDSFSTKTYKSICRPEDLRG 66
S SPPR YG R RSP + G GR P TSLLVRN+ D CR ++LR
Sbjct: 5 SLSPPRRGYGVRARSPPRGRYGGYGGRREPNTSLLVRNIPRD----------CRSDELRM 54
Query: 67 PFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
PF +FG LKD+YLP+D+YTGEPRGFGFVQ++DP DAA+A+YHMDG + GRE+TVV AE+
Sbjct: 55 PFERFGPLKDVYLPKDFYTGEPRGFGFVQFMDPQDAAEAQYHMDGQYIGGREITVVLAEK 114
Query: 127 NRKKPSEMRARERFRS-RSYDGRRSPPRYSRSPHYA----------------RGYSRSPD 169
NRKKP EMR R R+ R Y RR RSPHYA RG RS
Sbjct: 115 NRKKPDEMRVRTSARAPRGYGRRR------RSPHYARSRSRSRSLEHRSTSYRGGHRS-R 167
Query: 170 YYSPPPRRGRDSRSISPRYRRYR 192
YSP PRRG D S+SPR R +R
Sbjct: 168 SYSPVPRRGHDY-SVSPRDRHHR 189
>gi|168044871|ref|XP_001774903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673797|gb|EDQ60315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 126/207 (60%), Gaps = 23/207 (11%)
Query: 1 MRGRSYSYSPSPPRDY---GRRYRSPSPRGHYGGRGRD--LPTSLLVRNLRHDSFSTKTY 55
MRGRS SPPR G R RSPSPRG GG GRD P+SLLVRN+ D
Sbjct: 1 MRGRS-PLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRD------- 52
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 115
C EDLR PF ++G +KD+YLPRDYYTG+PRGFGFVQ+++P DAA+A+Y +D L+
Sbjct: 53 ---CSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEAQYCLDHQLIQ 109
Query: 116 GRELTVVFAEENRKKPSEMRARERFR-SRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPP 174
GRE+TVVFAEENRKKP EMR +ER R +RS R SRSP R + R SP
Sbjct: 110 GREITVVFAEENRKKPQEMRTKERIRPARSPSPGRENNAPSRSPSAVRSHRRRTGERSPM 169
Query: 175 PRRGRD------SRSISPRYRRYRERS 195
P R R SR PR R RS
Sbjct: 170 PSRERSPALPRRSRDGEPRARELEPRS 196
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/145 (59%), Positives = 102/145 (70%), Gaps = 16/145 (11%)
Query: 1 MRGRSYSYSPSPPRDY---GRRYRSPSPRGHYGGRGRD--LPTSLLVRNLRHDSFSTKTY 55
MRGRS SPPR G R RSPSPRG GG GRD P+SLLVRN+ D
Sbjct: 1 MRGRS-PLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRD------- 52
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 115
C EDLR PF ++G +KD+YLPRDYYTG+PRGFGFVQ+++P DAA+A+Y +D L+
Sbjct: 53 ---CSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEAQYCLDHQLIQ 109
Query: 116 GRELTVVFAEENRKKPSEMRARERF 140
GRE+TVVFAEENRKKP EMR +ER
Sbjct: 110 GREITVVFAEENRKKPQEMRTKERI 134
>gi|302760651|ref|XP_002963748.1| hypothetical protein SELMODRAFT_79810 [Selaginella moellendorffii]
gi|300169016|gb|EFJ35619.1| hypothetical protein SELMODRAFT_79810 [Selaginella moellendorffii]
Length = 100
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 73/83 (87%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
RPED+RGPF QFG +KD+YLP+D+YTGEPRGFGFVQY++P DAA AK+HMD +L GRE+
Sbjct: 6 RPEDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLGGREI 65
Query: 120 TVVFAEENRKKPSEMRARERFRS 142
TVVFAEENRKKPSEMR + R RS
Sbjct: 66 TVVFAEENRKKPSEMRMKSRVRS 88
>gi|302786120|ref|XP_002974831.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
gi|300157726|gb|EFJ24351.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
Length = 95
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 73/83 (87%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
RPED+RGPF QFG +KD+YLP+D+YTGEPRGFGFVQY++P DAA AK+HMD +L GRE+
Sbjct: 1 RPEDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLGGREI 60
Query: 120 TVVFAEENRKKPSEMRARERFRS 142
TVVFAEENRKKPSEMR + R RS
Sbjct: 61 TVVFAEENRKKPSEMRMKSRVRS 83
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 91/142 (64%), Gaps = 9/142 (6%)
Query: 18 RRYRSP---SPRGHYGGRGRDLPTSLLV-----RNLRHDSFSTKTYKSICRPEDLRGPFG 69
RRY P +PR YGGR R P + H S + CRPEDLR PF
Sbjct: 2 RRYSPPYYSAPRRGYGGRERSPPRRGYGGYGRRKEQNHGSLLVRNIPLNCRPEDLRVPFE 61
Query: 70 QFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 129
+FG ++D+YLP+DYYTGEPRGF FVQ++DP +A++A+YHM+G + GRE++VV A E RK
Sbjct: 62 RFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHMNGQIFAGREISVVVAAETRK 121
Query: 130 KPSEMRARERFRS-RSYDGRRS 150
+P EMR R R R SY GRRS
Sbjct: 122 RPEEMRTRARVRGPSSYGGRRS 143
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 91/142 (64%), Gaps = 9/142 (6%)
Query: 18 RRYRSP---SPRGHYGGRGRDLPTSLLV-----RNLRHDSFSTKTYKSICRPEDLRGPFG 69
RRY P +PR YGGR R P + H S + CRPEDLR PF
Sbjct: 79 RRYSPPYYSAPRRGYGGRERSPPRRGYGGYGRRKEQNHGSLLVRNIPLNCRPEDLRVPFE 138
Query: 70 QFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 129
+FG ++D+YLP+DYYTGEPRGF FVQ++DP +A++A+YHM+G + GRE++VV A E RK
Sbjct: 139 RFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHMNGQIFAGREISVVVAAETRK 198
Query: 130 KPSEMRARERFRS-RSYDGRRS 150
+P EMR R R R SY GRRS
Sbjct: 199 RPEEMRTRARVRGPSSYGGRRS 220
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 78/104 (75%), Gaps = 10/104 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PTSLLVRN+ D C +DLR PF ++G +KD+YLPRDYYTG PRGFGFVQ+
Sbjct: 55 PTSLLVRNIPRD----------CTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQF 104
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF 140
++P DAA+A+Y +D L+ GRE+TVVFAEENRKKP EMR +ER
Sbjct: 105 LEPRDAAEAQYCLDHQLIAGREITVVFAEENRKKPQEMRIKERI 148
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 78/104 (75%), Gaps = 10/104 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PTSLLVRN+ D C +DLR PF ++G +KD+YLPRDYYTG PRGFGFVQ+
Sbjct: 55 PTSLLVRNIPRD----------CTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQF 104
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF 140
++P DAA+A+Y +D L+ GRE+TVVFAEENRKKP EMR +ER
Sbjct: 105 LEPRDAAEAQYCLDHQLIAGREITVVFAEENRKKPQEMRIKERI 148
>gi|448878423|gb|AGE46174.1| arginine/serine-rich splicing factor SCL33 transcript II
[Physcomitrella patens subsp. patens]
Length = 248
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 78/104 (75%), Gaps = 10/104 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PTSLLVRN+ D C +DLR PF ++G +KD+YLPRDYYTG PRGFGFVQ+
Sbjct: 55 PTSLLVRNIPRD----------CTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQF 104
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF 140
++P DAA+A+Y +D L+ GRE+TVVFAEENRKKP EMR +ER
Sbjct: 105 LEPRDAAEAQYCLDHQLIAGREITVVFAEENRKKPQEMRIKERI 148
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 89/137 (64%), Gaps = 13/137 (9%)
Query: 8 YSP---SPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDL 64
YSP SPPR PR YGGR SLLVRN+ CR EDL
Sbjct: 43 YSPPYRSPPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNI----------PLSCRAEDL 92
Query: 65 RGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
R PF +FG ++D+YLP+DYYTGEPRGF FV+++DP DA++A+YHM+ ++ GRE+TVV A
Sbjct: 93 RVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 152
Query: 125 EENRKKPSEMRARERFR 141
E+RK+P EMR+R R R
Sbjct: 153 AESRKRPEEMRSRARVR 169
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 89/137 (64%), Gaps = 13/137 (9%)
Query: 8 YSP---SPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDL 64
YSP SPPR PR YGGR SLLVRN+ CR EDL
Sbjct: 28 YSPPYRSPPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNI----------PLSCRAEDL 77
Query: 65 RGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
R PF +FG ++D+YLP+DYYTGEPRGF FV+++DP DA++A+YHM+ ++ GRE+TVV A
Sbjct: 78 RVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 137
Query: 125 EENRKKPSEMRARERFR 141
E+RK+P EMR+R R R
Sbjct: 138 AESRKRPEEMRSRARVR 154
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 89/137 (64%), Gaps = 13/137 (9%)
Query: 8 YSP---SPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDL 64
YSP SPPR PR YGGR SLLVRN+ CR EDL
Sbjct: 4 YSPPYRSPPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNI----------PLSCRAEDL 53
Query: 65 RGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
R PF +FG ++D+YLP+DYYTGEPRGF FV+++DP DA++A+YHM+ ++ GRE+TVV A
Sbjct: 54 RVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 113
Query: 125 EENRKKPSEMRARERFR 141
E+RK+P EMR+R R R
Sbjct: 114 AESRKRPEEMRSRARVR 130
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 79/102 (77%), Gaps = 10/102 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PTSLLVRN+ D+ R +DLRGPF ++G +KD+YLP+D+Y+GEPRGFGFVQ+
Sbjct: 2 PTSLLVRNISRDT----------RADDLRGPFERYGAVKDVYLPKDFYSGEPRGFGFVQF 51
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
IDP DA +A+Y M+ L+ GRE++VVFAEE RKKP+EMR +E
Sbjct: 52 IDPRDAIEAQYKMNHQLIRGREVSVVFAEETRKKPAEMRMKE 93
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 80/112 (71%), Gaps = 10/112 (8%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLVRN+ D CRPE+LR PF +FG ++D+Y+P+DYYTGEPRGF FV+++D
Sbjct: 52 SLLVRNIPMD----------CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD 101
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRS 150
P +A++A+YHM+G GRE+TVV A E+RK+P +MR R R Y GRRS
Sbjct: 102 PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRS 153
>gi|356553842|ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
Length = 271
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SLLVRN+ D CRPE+LR PF +FG ++D+Y+P+DYY+GEPRGF FV
Sbjct: 37 DSNGSLLVRNIPLD----------CRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFV 86
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRAR-ERFRS-RSYDGRRS 150
Q++DP DA++A+YHM+ + GRE++VV AEE RK+P EMR R RFR SY GRRS
Sbjct: 87 QFVDPYDASEAQYHMNRQIFAGREISVVVAEETRKRPEEMRHRTSRFRGPASYGGRRS 144
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 88/137 (64%), Gaps = 13/137 (9%)
Query: 8 YSP---SPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDL 64
YSP SPPR PR YGGR SLLVRN+ CR EDL
Sbjct: 4 YSPPYRSPPRRGYGGRGRSPPRRGYGGRREQGSGSLLVRNI----------PLSCRGEDL 53
Query: 65 RGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
R PF +FG ++D+YLP+DYY+GEPRGF FV+++DP DA++A+YHM+ + GRE+TVV A
Sbjct: 54 RVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLA 113
Query: 125 EENRKKPSEMRARERFR 141
E+RK+P EMR+R R R
Sbjct: 114 AESRKRPEEMRSRARVR 130
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 111/188 (59%), Gaps = 22/188 (11%)
Query: 8 YSP---SPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDL 64
YSP SPPR PR YGGR SLLVRN+ CR EDL
Sbjct: 4 YSPPYRSPPRRGYGGRGRSPPRRGYGGRREQGSGSLLVRNI----------PLSCRGEDL 53
Query: 65 RGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
R PF +FG ++D+YLP+DYY+GEPRGF FV+++DP DA++A+YHM+ + GRE+TVV A
Sbjct: 54 RVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLA 113
Query: 125 EENRKKPSEMRARERFRSRSYD------GRRSPPRYSRSPHYARGYSRSPDYYSPPPRRG 178
E+RK+P EMR+R R R S + SRSPHY RG RS YSP PRR
Sbjct: 114 AESRKRPEEMRSRARVRGYSGNEGRRSSYYGRSRSRSRSPHY-RGRPRS-RSYSPAPRR- 170
Query: 179 RDSRSISP 186
RD S SP
Sbjct: 171 RDDYSASP 178
>gi|302760313|ref|XP_002963579.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
gi|302799491|ref|XP_002981504.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300150670|gb|EFJ17319.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300168847|gb|EFJ35450.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
Length = 79
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 70/78 (89%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
RPE++R PF +FG +KD+YLP+DYY+GEPRGFGFVQ+I+P DAADAK++MD LL GRE+
Sbjct: 2 RPEEVRVPFEKFGPVKDVYLPKDYYSGEPRGFGFVQFIEPGDAADAKFNMDHQLLGGREI 61
Query: 120 TVVFAEENRKKPSEMRAR 137
TVVFAEENRKKPSEMR +
Sbjct: 62 TVVFAEENRKKPSEMRIK 79
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 80/112 (71%), Gaps = 10/112 (8%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLVRN+ D CRPE+LR PF +FG ++D+Y+P+DYYTGEPRGF FV+++D
Sbjct: 54 SLLVRNIPMD----------CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVD 103
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRS 150
P +A++A+YHM+G GRE+TVV A E+RK+P +MR R R Y GRRS
Sbjct: 104 PYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRS 155
>gi|326510839|dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 87/137 (63%), Gaps = 13/137 (9%)
Query: 8 YSP---SPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDL 64
YSP SPPR PR YGGR SLLVRN+ CRPEDL
Sbjct: 4 YSPQYRSPPRRGYGGRGRSPPRRGYGGRREQGSGSLLVRNI----------PLSCRPEDL 53
Query: 65 RGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
R PF +FG ++D+YLP+DYYT EPRGF FV+++DP DA+DA+YH++ L GRE+TVV A
Sbjct: 54 RVPFERFGPVRDVYLPKDYYTREPRGFAFVEFVDPYDASDAQYHLNRSLFFGREITVVVA 113
Query: 125 EENRKKPSEMRARERFR 141
E+RK+P +MR R R R
Sbjct: 114 AESRKRPDDMRNRARVR 130
>gi|118484981|gb|ABK94355.1| unknown [Populus trichocarpa]
Length = 252
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 86/133 (64%), Gaps = 14/133 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+ LL+RNL D RPEDLRGPF +FG LKDIYLP++Y+TGEPRGFGFV+Y
Sbjct: 48 SGLLIRNLPLD----------ARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYR 97
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR--SYDGRRSPPRYS 155
DAA+AK MD ++ GRE+ +VFAEENRK P EMR R R G R+PPR
Sbjct: 98 YGEDAAEAKKRMDHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSP 157
Query: 156 RSPHYARGYSRSP 168
R H R YSRSP
Sbjct: 158 R--HRYRSYSRSP 168
>gi|116793427|gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 105/186 (56%), Gaps = 38/186 (20%)
Query: 36 LPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQ 95
LPT LLVRN+ D RPEDLR PF +FG +KD+YLP+++YT EPRGFGFV+
Sbjct: 53 LPTGLLVRNISLD----------ARPEDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVK 102
Query: 96 YIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG-------- 147
Y + DAA+AK HM+ ++ GRE+++VFAEENRK P EMRA R R+ + G
Sbjct: 103 YRNHDDAAEAKRHMNHQVIGGREISIVFAEENRKNPQEMRATARVRTSRHPGGGFRRRTP 162
Query: 148 --------RRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRS 199
R S S H RG++ D YS + RSISP RS SRS
Sbjct: 163 PRSPRRRYRSYSRSPSPSRHGLRGHTPQEDDYS-------EGRSISP-----IPRSESRS 210
Query: 200 PYGSRS 205
P G RS
Sbjct: 211 PQGFRS 216
>gi|224107319|ref|XP_002314444.1| predicted protein [Populus trichocarpa]
gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 86/133 (64%), Gaps = 14/133 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+ LL+RNL D RPEDLRGPF +FG LKDIYLP++Y+TGEPRGFGFV+Y
Sbjct: 48 SGLLIRNLPLD----------ARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYR 97
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR--SYDGRRSPPRYS 155
DAA+AK MD ++ GRE+ +VFAEENRK P EMR R R G R+PPR
Sbjct: 98 YGEDAAEAKKRMDHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSP 157
Query: 156 RSPHYARGYSRSP 168
R H R YSRSP
Sbjct: 158 R--HRYRSYSRSP 168
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea mays]
Length = 259
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 103/162 (63%), Gaps = 15/162 (9%)
Query: 29 YGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEP 88
YGGR ++ SLLVRN+ R EDLR PF +FG ++D+Y+P+DYY+GEP
Sbjct: 30 YGGR-KEGSGSLLVRNI----------PLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEP 78
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDG 147
RGF FV+++DP DA++A+YHM+ + GRE+ VV A E+RK+P EMR+R R R S ++G
Sbjct: 79 RGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLAAESRKRPEEMRSRTRVRGYSGHEG 138
Query: 148 RRS--PPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPR 187
RRS R RG RS YSP PRRG D S SPR
Sbjct: 139 RRSSYYGRSRSRSPRYRGRPRSSRSYSPAPRRGNDY-SASPR 179
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 10/107 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P+ LLVRN+ D RPEDLR PF +FG +KD+YLP++YYTGEPRGFGFV++
Sbjct: 43 PSGLLVRNIALD----------ARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKF 92
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR 143
+ DAA+AK+H++ ++ GRE+ +VFAEENRK P EMR R R
Sbjct: 93 RNAEDAAEAKHHLNHSVIGGREIAIVFAEENRKTPQEMRTNSRVSGR 139
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 79/112 (70%), Gaps = 10/112 (8%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLVRN+ D CRP++LRGPF +FG ++D+Y+P+DYYTGEPRGF FVQ++D
Sbjct: 7 SLLVRNIPLD----------CRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVD 56
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRS 150
P +A +A++ M+G + GR+++VV A E RK+P EMR R R R S G RS
Sbjct: 57 PYEAMEAQHRMNGQIFAGRQISVVLAAETRKRPEEMRHRARVRGPSSHGGRS 108
>gi|356499101|ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
Length = 276
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 10/103 (9%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SLLVRN+ D CRPE+LR PF +FG ++D+Y+P+DYY+GEPRGF FV
Sbjct: 44 DSNGSLLVRNIPLD----------CRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFV 93
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRAR 137
Q++DP DA++A+YHM+ + GRE++VV AEE RK+P EMR R
Sbjct: 94 QFVDPYDASEAQYHMNRQIFAGREISVVVAEETRKRPEEMRHR 136
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 100/176 (56%), Gaps = 35/176 (19%)
Query: 13 PRDYGRRYRSPSPRGHYGGRGRD---LPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFG 69
PRD RYR+ PR RG D PT LLVRN+ R ED+RGPF
Sbjct: 36 PRD---RYRAGPPR-----RGYDRPSAPTGLLVRNI----------SLTARLEDIRGPFE 77
Query: 70 QFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 129
QFG +KD+YLPR+++T E RGFGFV++ P DAA AK M+ ++ GRE+T+VFAEENRK
Sbjct: 78 QFGPIKDVYLPRNFHTKELRGFGFVKFRHPEDAAYAKQEMNHQVICGREITIVFAEENRK 137
Query: 130 KPSEMRARERFRSRSYDGR--------RSP----PRYSRSPHYARGYSRSPDYYSP 173
P EMR R RSR DG RSP P YS P R SR D YSP
Sbjct: 138 TPQEMRFRT--RSRHMDGNYRRRQSMSRSPRPRYPSYSPEPSPVRQNSRDRDNYSP 191
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 76/103 (73%), Gaps = 10/103 (9%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLVRN+ D CRPE+LRG F +FG ++D+Y+P+DY+TGEPRGFGFVQ+++
Sbjct: 45 SLLVRNIPRD----------CRPEELRGMFERFGVVRDVYIPKDYHTGEPRGFGFVQFVE 94
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFR 141
P+DA +A++HM+G + GR++ VV A E RK+P EMR R R R
Sbjct: 95 PSDAMEAQHHMNGQVFAGRQMFVVVAAETRKRPEEMRHRTRVR 137
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 98/154 (63%), Gaps = 19/154 (12%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLVRN+ CR EDLR PF +FG ++D+YLP+DYY+GEPRGF FV+++D
Sbjct: 7 SLLVRNI----------PLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVD 56
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD------GRRSPP 152
P DA++A+YHM+ + GRE+TVV A E+RK+P EMR+R R R S +
Sbjct: 57 PYDASEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRGYSGNEGRRSSYYGRSR 116
Query: 153 RYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISP 186
SRSPHY RG RS YSP PRR RD S SP
Sbjct: 117 SRSRSPHY-RGRPRS-RSYSPAPRR-RDDYSASP 147
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 12/123 (9%)
Query: 29 YGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEP 88
YGGR ++ SLLVRN+ R EDLR PF +FG ++D+Y+P+DYY+GEP
Sbjct: 30 YGGR-KEGSGSLLVRNI----------PLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEP 78
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDG 147
RGF FV+++DP DA++A+YHM+ + GRE+ VV A E+RK+P EMR+R R R S ++G
Sbjct: 79 RGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLAAESRKRPEEMRSRTRVRGYSGHEG 138
Query: 148 RRS 150
RRS
Sbjct: 139 RRS 141
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea mays]
Length = 258
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 12/123 (9%)
Query: 29 YGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEP 88
YGGR ++ SLLVRN+ R EDLR PF +FG ++D+Y+P+DYY+GEP
Sbjct: 30 YGGR-KEGSGSLLVRNI----------PLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEP 78
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDG 147
RGF FV+++DP DA++A+YHM+ + GRE+ VV A E+RK+P EMR+R R R S ++G
Sbjct: 79 RGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLAAESRKRPEEMRSRTRVRGYSGHEG 138
Query: 148 RRS 150
RRS
Sbjct: 139 RRS 141
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 77/113 (68%), Gaps = 11/113 (9%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLVRN+ D CRPE+LR PF +FG ++D+Y+P+DYYTGEPRGF FVQ++D
Sbjct: 44 SLLVRNIPLD----------CRPEELRAPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVD 93
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF-RSRSYDGRRS 150
DA +A++ M+G + GRE++VV A E RK+P EMR R R R Y GR S
Sbjct: 94 TYDAMEAQHRMNGQIFAGREISVVVAAETRKRPEEMRQRSRIGRPSGYGGRSS 146
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 85/134 (63%), Gaps = 14/134 (10%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P+ LLVRNL D RPEDLRGPF ++G +KD+YLP++YYTGEPRGFGFV+Y
Sbjct: 51 PSGLLVRNLPLD----------ARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKY 100
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR--RSPPRY 154
DAA+AK M+ ++ GRE+ +V+AEENRK P EMR R R R+PP+
Sbjct: 101 RYAEDAAEAKQRMNHKIIGGREIRIVYAEENRKTPQEMRTTARVSGRHGGSTRGRTPPKS 160
Query: 155 SRSPHYARGYSRSP 168
R H R YS SP
Sbjct: 161 PRRRH--RSYSHSP 172
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
gi|241947359|gb|EES20504.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
Length = 208
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 79/113 (69%), Gaps = 10/113 (8%)
Query: 29 YGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEP 88
YGGR ++ SLLVRN+ R E+LR PF +FG ++D+Y+P+DYY+GEP
Sbjct: 82 YGGRNKEGSGSLLVRNIPLS----------VRAEELRVPFERFGPVRDVYIPKDYYSGEP 131
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFR 141
RGF FV+++DP DA++A+YHM+ + GRE+ VV A E+RK+P EMR+R R R
Sbjct: 132 RGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLAAESRKRPEEMRSRARVR 184
>gi|357478559|ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 314
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 10/101 (9%)
Query: 36 LPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQ 95
LP+ LLVRNL D+ RPEDLRGPF ++G +KD+YLPR+YYTGEPRGFGFV+
Sbjct: 46 LPSGLLVRNLPLDA----------RPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVK 95
Query: 96 YIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA 136
Y DAA+AK ++ ++ GRE+ +VFAEENRK P EMR
Sbjct: 96 YRHGEDAAEAKQQLNHTIIGGREIRIVFAEENRKTPQEMRV 136
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 120/225 (53%), Gaps = 32/225 (14%)
Query: 4 RSYSYSP---SPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
R Y SP SPPR PR YGGR SLLVRN+ R
Sbjct: 28 RGYGGSPPHRSPPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNI----------PLSAR 77
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
EDLR PF +FG ++D+YLP+DYY+GEPRGF FV+++DP DA++A+YHM+ + GRE+T
Sbjct: 78 AEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREIT 137
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDGRRS----------PPRYSRSPHYARGYSRSPDY 170
VV A E+RK+P +MR+R R R Y G + R RG
Sbjct: 138 VVLAAESRKRPEDMRSRTRIRG--YSGGQEGRRSSHYGRSRSRSRSLSPRPRGGRPRSRS 195
Query: 171 YSPPPRRGRDSRSISPRYRR-YRERSYSRSPYGS-----RSYSPS 209
YSP PRR RD S SPR R +R +S R P + RSYSP+
Sbjct: 196 YSPAPRR-RDDYSASPRGRESHRTKSPIRHPKENEEGKRRSYSPA 239
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 80/115 (69%), Gaps = 13/115 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLVRN+ D CRPE+LR PF +FG ++D+Y+P+DYY+G+PRGF FVQ++D
Sbjct: 48 SLLVRNIPLD----------CRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVD 97
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR---ARERFRSRSYDGRRS 150
+A++A+YHMD + GRE++VV A E RK+P EMR +R R SY G+RS
Sbjct: 98 AYEASEAQYHMDRQIFAGREISVVVAAETRKRPEEMRHRTSRSRGPGGSYGGQRS 152
>gi|448878244|gb|AGE46085.1| arginine/serine-rich splicing factor SCL25B transcript II [Zea
mays]
gi|448878252|gb|AGE46089.1| arginine/serine-rich splicing factor SCL25B transcript VI [Zea
mays]
gi|448878258|gb|AGE46092.1| arginine/serine-rich splicing factor SCL25B transcript IX [Zea
mays]
Length = 84
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/83 (77%), Positives = 65/83 (78%), Gaps = 10/83 (12%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R YSYSPSPPR Y RR RSPSP HYGGRGRDLPTSLLVRNLR D CRPED
Sbjct: 3 RGYSYSPSPPRGYRRRARSPSPHDHYGGRGRDLPTSLLVRNLRRD----------CRPED 52
Query: 64 LRGPFGQFGRLKDIYLPRDYYTG 86
LR PFGQFGR+KDIYLPRDYYTG
Sbjct: 53 LRRPFGQFGRVKDIYLPRDYYTG 75
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 79/113 (69%), Gaps = 11/113 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRN+ CRPE+LR PF +FG ++D+YLPRDY+TGEPRGFGFV+++
Sbjct: 40 VSLLVRNI----------PLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFV 89
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 149
D DA++A+YHM+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 90 DAYDASEAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 142
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 79/113 (69%), Gaps = 11/113 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRN+ CRPE+LR PF +FG ++D+YLPRDY+TGEPRGFGFV+++
Sbjct: 38 VSLLVRNI----------PLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFV 87
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 149
D DA++A+YHM+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 88 DAYDASEAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 140
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 79/113 (69%), Gaps = 11/113 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRN+ CRPE+LR PF +FG ++D+YLPRDY+TGEPRGFGFV+++
Sbjct: 40 VSLLVRNI----------PLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFV 89
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 149
D DA++A+YHM+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 90 DAYDASEAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 142
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 79/113 (69%), Gaps = 11/113 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRN+ CRPE+LR PF +FG ++D+YLPRDY+TGEPRGFGFV+++
Sbjct: 38 VSLLVRNI----------PLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFV 87
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 149
D DA++A+YHM+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 88 DAYDASEAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 140
>gi|413950003|gb|AFW82652.1| hypothetical protein ZEAMMB73_474332 [Zea mays]
Length = 221
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 88/135 (65%), Gaps = 14/135 (10%)
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRS 144
EPRGFGF+QY DP DA+DAKYHMDG +LLGRE VVFAEENRKKPS+MRARE+ R RS
Sbjct: 85 EPRGFGFIQYFDPEDASDAKYHMDGKMLLGRETVVVFAEENRKKPSDMRAREKISGRGRS 144
Query: 145 YDGR---RSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPY 201
YDGR RSP R SRS YSP ++ SRS +P RERS SRS
Sbjct: 145 YDGRLRSRSPGLNDSPRGRLRSQSRS---YSPALKQKHYSRSPAP----PRERSLSRSLA 197
Query: 202 G--SRSYSPSRSRSR 214
SRS SP SRSR
Sbjct: 198 INRSRSASPIVSRSR 212
>gi|363543465|ref|NP_001241742.1| SR repressor protein [Zea mays]
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 11/113 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRN+ CRPE+LR PF +FG ++D YLPRDY+TGEPRGFGFV+++
Sbjct: 38 VSLLVRNI----------PLRCRPEELRVPFERFGPVRDFYLPRDYHTGEPRGFGFVEFV 87
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS-YDGRR 149
D DA++A+YHM+ + GRE+TVV A + RK+P +MR R R S ++GRR
Sbjct: 88 DAYDASEAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRR 140
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 10/111 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PT LLVRN+ RPED+R PF QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 60 PTGLLVRNI----------SLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKF 109
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 147
P DAA AK ++ ++ GRE+++VFAEENRK P EMR R R R DG
Sbjct: 110 RYPEDAAVAKQELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDG 160
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 10/111 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PT LLVRN+ RPED+R PF QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 60 PTGLLVRNI----------SLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKF 109
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 147
P DAA AK ++ ++ GRE+++VFAEENRK P EMR R R R DG
Sbjct: 110 RYPEDAAVAKQELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDG 160
>gi|388503430|gb|AFK39781.1| unknown [Medicago truncatula]
Length = 336
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 10/101 (9%)
Query: 36 LPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQ 95
LP+ LLVRNL D+ RPEDLRGPF ++G +KD+YLPR+YYTGEPRGFGFV+
Sbjct: 46 LPSGLLVRNLPLDA----------RPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVK 95
Query: 96 YIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA 136
Y DAA AK ++ ++ GRE+ +VFAEENRK P EMR
Sbjct: 96 YRHGEDAAGAKQQLNHTIIGGREIRIVFAEENRKTPQEMRV 136
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 10/111 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PT LLVRN+ RPED+R PF QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 60 PTGLLVRNI----------SLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKF 109
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 147
P DAA AK ++ ++ GRE+++VFAEENRK P EMR R R R DG
Sbjct: 110 RYPEDAAVAKQELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDG 160
>gi|297829752|ref|XP_002882758.1| hypothetical protein ARALYDRAFT_897406 [Arabidopsis lyrata subsp.
lyrata]
gi|297328598|gb|EFH59017.1| hypothetical protein ARALYDRAFT_897406 [Arabidopsis lyrata subsp.
lyrata]
Length = 139
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 66/84 (78%), Gaps = 10/84 (11%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPE 62
GRSYSYSPSPPR YGRRYRSPSP +Y GR RD PTSLLVRNLRHD CR +
Sbjct: 2 GRSYSYSPSPPRSYGRRYRSPSPVDYYRGRSRDPPTSLLVRNLRHD----------CRQD 51
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTG 86
DLR PFG+FGRLKDIYLPR+YYTG
Sbjct: 52 DLRRPFGRFGRLKDIYLPRNYYTG 75
>gi|224033195|gb|ACN35673.1| unknown [Zea mays]
gi|413955617|gb|AFW88266.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
gi|413955618|gb|AFW88267.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
Length = 143
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 88/135 (65%), Gaps = 13/135 (9%)
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRS 144
EPRGFGF+QY DP DA+DAKY+MDG +LLGRE+ VVFAEENRKKPS+MRARE+ R RS
Sbjct: 5 EPRGFGFIQYFDPEDASDAKYYMDGKMLLGREIAVVFAEENRKKPSDMRAREKISGRGRS 64
Query: 145 YDGRRSPPRYSRSPHY----ARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSP 200
YDGR SRSP YSP P+R SRS +P R RERS SRSP
Sbjct: 65 YDGR----LRSRSPGLNGSPRGRSRSQSRSYSPAPKRKHYSRSPAP---RPRERSLSRSP 117
Query: 201 YGSRSYSPSRSRSRS 215
+RS S S SRS
Sbjct: 118 AVNRSRSASPIVSRS 132
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 70/100 (70%), Gaps = 10/100 (10%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P+ LLVRNL D RPEDLR PF +FG +KD+YLP++YYTGEPRGFGFV++
Sbjct: 49 PSGLLVRNLPLD----------ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKF 98
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA 136
DAA+AK ++ ++ GRE+ +VFAEENRK P EMR
Sbjct: 99 RFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMRV 138
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
gi|297322142|gb|EFH52563.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 73/105 (69%), Gaps = 10/105 (9%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
LLVRN+ D CRPE+LR PF +FG ++D+Y+PRDYY+GEPRGF FV+++D
Sbjct: 48 LLVRNIPLD----------CRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDA 97
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS 144
DA +A+ M+ + GRE+TVV A E+RK+P EMR + R RSR
Sbjct: 98 YDAGEAQRSMNRRIFAGREITVVVASESRKRPEEMRVKTRTRSRE 142
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 69/99 (69%), Gaps = 10/99 (10%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P+ LL+RNL D+ RPEDLR F +FG LKDIYLP++YYTGEPRGFGFV+Y
Sbjct: 39 PSGLLIRNLPLDA----------RPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKY 88
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
DAA+AK MD + GRE+ +VFAEENRK P EMR
Sbjct: 89 RHSEDAAEAKQRMDHKTIGGREIRIVFAEENRKTPQEMR 127
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 74/111 (66%), Gaps = 10/111 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PT LLVRN+ + RPED+R PF QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 60 PTGLLVRNISLTA----------RPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKF 109
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 147
P DAA AK ++ ++ GRE+++VFAEENRK P EMR R R R DG
Sbjct: 110 RYPEDAAVAKQELNHQVIGGREISIVFAEENRKTPQEMRMRTRTSGRYMDG 160
>gi|255639915|gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 72/101 (71%), Gaps = 10/101 (9%)
Query: 36 LPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQ 95
LP+ LLVRNL D+ RPEDLR PF ++G +KD+YLP++YYTGEPRGFGFV+
Sbjct: 47 LPSGLLVRNLPLDA----------RPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVK 96
Query: 96 YIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA 136
Y DAA+AK H++ ++ GRE+ +VFAEENRK EMR
Sbjct: 97 YRYGEDAAEAKQHLNHTIIGGREIRIVFAEENRKTSQEMRV 137
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 10/108 (9%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
LLVRN+ D CRPE+LR PF +FG ++D+Y+PRDYY+G+PRGF FV+++D
Sbjct: 49 LLVRNIPLD----------CRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDA 98
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 147
DA +A+ M+ GRE+TVV A E+RK+P EMR + R RSR G
Sbjct: 99 YDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVKTRTRSREPSG 146
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 10/110 (9%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
LLVRN+ D CRPE+LR PF +FG ++D+Y+PRDYY+G+PRGF FV+++D
Sbjct: 49 LLVRNIPLD----------CRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDA 98
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRR 149
DA +A+ M+ GRE+TVV A E+RK+P EMR + R RSR G R
Sbjct: 99 YDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVKTRTRSREPSGSR 148
>gi|219888887|gb|ACL54818.1| unknown [Zea mays]
gi|414887750|tpg|DAA63764.1| TPA: splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 138
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 84/123 (68%), Gaps = 9/123 (7%)
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD 146
+PRGFGFVQY DPADAADAKY+MDG ++LGR++TVVFAEENRKKP EMRAR+R R SYD
Sbjct: 5 DPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 64
Query: 147 GRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRSY 206
RR S + R SRS Y PP+ +PR+ R RERSYS SP SRS
Sbjct: 65 DRRYSRSRSPRYYRGRSPSRSQSYSRSPPQ--------NPRH-RLRERSYSGSPVDSRSR 115
Query: 207 SPS 209
S S
Sbjct: 116 SGS 118
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 10/108 (9%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
LLVRN+ D CRPE+LR PF +FG ++D+Y+PRDYY+G+PRGF FV+++D
Sbjct: 49 LLVRNIPLD----------CRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDA 98
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 147
DA +A+ M+ GRE+TVV A E+RK+P EMR + R RSR G
Sbjct: 99 YDAGEAQRSMNRRSFSGREITVVVASESRKRPEEMRVKTRTRSREPSG 146
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 10/111 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+ LL+RN+ RPED+R PF QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 57 SGLLIRNI----------SLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFR 106
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 148
P DAA AK M+ ++ GRE+++V+AEENRK P EMR R R R +GR
Sbjct: 107 YPEDAAVAKQEMNHQVIGGREISIVYAEENRKTPQEMRRRTRTSGRYMEGR 157
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL CRPED++ PF +FG ++D+YLP+DY TGEPRGF FV++
Sbjct: 35 VSLFVSNL----------PRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFA 84
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+DA+ A+YHM+ +L GRE++V FA + RK+P EMR
Sbjct: 85 HSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 122
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL CRPED++ PF +FG ++D+YLP+DY TGEPRGF FV++
Sbjct: 35 VSLFVSNL----------PRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFA 84
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+DA+ A+YHM+ +L GRE++V FA + RK+P EMR
Sbjct: 85 HSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 122
>gi|357112195|ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 73/111 (65%), Gaps = 11/111 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PT LLVRN+ R ED+RGPF QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 57 PTGLLVRNI----------SLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKF 106
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG 147
DAA AK ++ ++ GRE+++VFAEENRK P EMR R R R +DG
Sbjct: 107 RYSEDAAYAKQELNHQVICGREISIVFAEENRKTPQEMRFRTRTGGR-HDG 156
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 10/111 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+ LL+RN+ RPED+R PF QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 57 SGLLIRNI----------SLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFR 106
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 148
P DAA AK M+ ++ GRE+++V+AEENRK P EMR R R R +GR
Sbjct: 107 YPEDAAVAKQEMNHQVIGGREISIVYAEENRKTPQEMRRRTRTSGRYMEGR 157
>gi|413935498|gb|AFW70049.1| hypothetical protein ZEAMMB73_947633 [Zea mays]
Length = 143
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 85/135 (62%), Gaps = 13/135 (9%)
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRS 144
EPRGFGF+QY D DA+DAKYHMDG +LLGRE+ VVFAEEN KKP +MRARE+ R RS
Sbjct: 5 EPRGFGFIQYFDTEDASDAKYHMDGKMLLGREIVVVFAEENWKKPFDMRAREKISGRGRS 64
Query: 145 YDGRRSPPRYSRSPHY----ARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSP 200
YDGR +SRSP YSP ++ SRS +P R RERS SRSP
Sbjct: 65 YDGR----LHSRSPGLNDSPRGRSRSQSRSYSPTLKQKHYSRSPAP---RPRERSLSRSP 117
Query: 201 YGSRSYSPSRSRSRS 215
+RS S S SRS
Sbjct: 118 AVNRSRSASPIVSRS 132
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 76/121 (62%), Gaps = 12/121 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+ LL+RN+ RPED+R F QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 57 SGLLIRNI----------SLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFR 106
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
P DAA AK M ++ GRE+++V+AEENRK P EMR R R R D R + R SRS
Sbjct: 107 YPEDAAVAKREMHHQVIGGREISIVYAEENRKTPQEMRMRTRTSGRYMDERYT--RLSRS 164
Query: 158 P 158
P
Sbjct: 165 P 165
>gi|448878336|gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transcript II [Sorghum
bicolor]
Length = 190
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
RPED+R PF QFG +KD+YLPR+++T E RGFGFV++ P DAA AK M+ ++ GRE
Sbjct: 68 ARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEMNHQVIGGRE 127
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGR 148
+++V+AEENRK P EMR R R R +GR
Sbjct: 128 ISIVYAEENRKTPQEMRRRTRTSGRYMEGR 157
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL CRPED++ PF +FG ++D+YLP+DY TGEPRGF FV++
Sbjct: 331 VSLFVSNLTRS----------CRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFA 380
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+DA+ A+YHM+ +L GRE++V FA + RK+P EMR
Sbjct: 381 HSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 418
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 61/77 (79%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
CRPED++ PF +FG ++D+YLP+DY TGEPRGF FV++ +DA+ A+YHM+ +L GRE
Sbjct: 408 CRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYHMNRKMLSGRE 467
Query: 119 LTVVFAEENRKKPSEMR 135
++V FA + RK+P EMR
Sbjct: 468 ISVAFAVQTRKRPEEMR 484
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 16/104 (15%)
Query: 36 LPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQ 95
LP+ LLVRNL D+ RPEDLRGPF ++G +KD+YLPR+YYTGEPRGFGFV+
Sbjct: 46 LPSGLLVRNLPLDA----------RPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVK 95
Query: 96 Y---IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA 136
Y D A+A H ++ GRE+ +VFAEENRK P EMR
Sbjct: 96 YRHGEDAAEAKQQLNHT---IIGGREIRIVFAEENRKTPQEMRV 136
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 10/111 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+ LL+RN+ RPED+R F QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 57 SGLLIRNI----------SLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFR 106
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 148
P DAA AK M ++ GRE+++V+AEENRK P EMR R R R D R
Sbjct: 107 YPEDAAVAKREMHHQVIGGREISIVYAEENRKTPQEMRMRTRTSGRYMDER 157
>gi|413947426|gb|AFW80075.1| hypothetical protein ZEAMMB73_562035 [Zea mays]
Length = 661
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%)
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
P+DLR PFG+FG +KDIYL DYYT EPRGFGF+Q DP DA+DAKYHMDG +LLGRE+
Sbjct: 589 PDDLRRPFGKFGPVKDIYLSNDYYTREPRGFGFIQNFDPEDASDAKYHMDGKMLLGREIV 648
Query: 121 VVF 123
VV
Sbjct: 649 VVL 651
>gi|413949176|gb|AFW81825.1| hypothetical protein ZEAMMB73_636417 [Zea mays]
Length = 143
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 59/73 (80%), Gaps = 5/73 (6%)
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRS 144
EPRGFGF+QY DP DA++AKYHMDG +LLGR++ VVF EENRKKPS+MRARE+ R RS
Sbjct: 8 EPRGFGFIQYFDPEDASNAKYHMDGKMLLGRKIAVVFVEENRKKPSDMRAREKISGRGRS 67
Query: 145 YDGR---RSPPRY 154
YDGR RSP Y
Sbjct: 68 YDGRLRSRSPGLY 80
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 10/111 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+ LL+RN+ RPED+R F QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 57 SGLLIRNI----------SLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFR 106
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 148
P DAA AK M ++ GRE+++V+AEENRK P EMR R R R D R
Sbjct: 107 YPEDAAVAKREMHHQVIGGREISIVYAEENRKTPQEMRMRTRTSGRYMDER 157
>gi|448878350|gb|AGE46138.1| arginine/serine-rich splicing factor SCL25B transcript III
[Sorghum bicolor]
Length = 81
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 66/84 (78%), Gaps = 10/84 (11%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R YSYSPSPPR Y RR RSPSPR +YGGRGRDLPTSLLVRNLR D CRPED
Sbjct: 3 RGYSYSPSPPRGYRRRERSPSPRDYYGGRGRDLPTSLLVRNLRRD----------CRPED 52
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGE 87
LR PFGQFGRLKDIYLPRDYYTG
Sbjct: 53 LRRPFGQFGRLKDIYLPRDYYTGN 76
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 96/185 (51%), Gaps = 23/185 (12%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P+ LL+RNL D+ RP DLR F +FG LKDIYLPR+YYTGEPRGFGFV+Y
Sbjct: 46 PSGLLIRNLPLDA----------RPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKY 95
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR 156
DAA+A M+ ++ GRE+ +VFAEENRK P EMR R D +R+ R R
Sbjct: 96 RYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPR 155
Query: 157 SPHYA-------------RGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGS 203
+ + R D YSP R SRS PR R + RSP
Sbjct: 156 RRYRSHSRSRSPPRRESRHSKVREDDLYSPRRRSRSISRSPLPRNEREYKSRNCRSPREE 215
Query: 204 RSYSP 208
R +P
Sbjct: 216 RVLTP 220
>gi|224073164|ref|XP_002304003.1| predicted protein [Populus trichocarpa]
gi|222841435|gb|EEE78982.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 53/63 (84%)
Query: 83 YYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRS 142
+ EPRGFGFVQY DP DAA+AK+HMDG + LGRELTVVFAEENRKKP +MRARER +
Sbjct: 20 FLLLEPRGFGFVQYADPHDAAEAKHHMDGRVFLGRELTVVFAEENRKKPVDMRARERTAT 79
Query: 143 RSY 145
R++
Sbjct: 80 RTW 82
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 96/185 (51%), Gaps = 23/185 (12%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P+ LL+RNL D+ RP DLR F +FG LKDIYLPR+YYTGEPRGFGFV+Y
Sbjct: 46 PSGLLIRNLPLDA----------RPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKY 95
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR 156
DAA+A M+ ++ GRE+ +VFAEENRK P EMR R D +R+ R R
Sbjct: 96 RYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPR 155
Query: 157 SPHYA-------------RGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGS 203
+ + R D YSP R SRS PR R + RSP
Sbjct: 156 RRYRSHSRSRSPPRRESRHSKVREDDLYSPRRRSRSISRSPLPRNEREYKSRNCRSPREE 215
Query: 204 RSYSP 208
R +P
Sbjct: 216 RVLTP 220
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 66/102 (64%), Gaps = 9/102 (8%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRNL D + R ED+R FG++G + DIY+P DYYT EPRGF +VQ+
Sbjct: 12 TSLYVRNLPDD---------VSRAEDMRNLFGKYGPISDIYIPLDYYTREPRGFAYVQFD 62
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y +D Y GREL + +AE +RK P++MR +ER
Sbjct: 63 DIRDAEDAMYALDRYRFYGRELEIQYAEGDRKTPTQMRGKER 104
>gi|168042923|ref|XP_001773936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674780|gb|EDQ61284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%)
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
EPRGFGF+QY+DPADAADA+YHMD + GRE+TVVFAEENRKKPSEMR +ER
Sbjct: 52 EPRGFGFIQYLDPADAADAQYHMDRQFIAGREITVVFAEENRKKPSEMRVKER 104
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 95/185 (51%), Gaps = 23/185 (12%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P+ LL+RNL D+ RP DLR F +FG LKDIYLPR+YYTGEPRGFGFV+Y
Sbjct: 46 PSGLLIRNLPLDA----------RPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKY 95
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR 156
DAA+A M+ ++ GRE+ +VFAEENRK EMR R D +R+ R R
Sbjct: 96 RYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTTQEMRTTNGTSGRRGDYKRTSHRSPR 155
Query: 157 SPHYA-------------RGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGS 203
+ + R D YSP R SRS PR R + RSP
Sbjct: 156 RRYRSHSRSRSPPRRESRHSKVREDDLYSPRRRSRSISRSPLPRNEREYKSRNCRSPREE 215
Query: 204 RSYSP 208
R +P
Sbjct: 216 RVLTP 220
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL+VRNL D R EDLR F ++G LKD+Y+PRDYYT PRGFGFV++
Sbjct: 17 VSLVVRNLPLD----------IRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFK 66
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
D DA DA Y +D + GRE++V F+ E RK P +M
Sbjct: 67 DTRDAEDAMYSLDRSTINGREISVTFSREGRKTPRDM 103
>gi|227204479|dbj|BAH57091.1| AT1G55310 [Arabidopsis thaliana]
Length = 203
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/130 (63%), Positives = 88/130 (67%), Gaps = 11/130 (8%)
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRS-----P 151
+DPADAADAK+HMDGYLLLGRELTVVFAEENRKKP+EMRARER R D RR+
Sbjct: 1 MDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRDRRRTPPRYYS 60
Query: 152 PRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYR-ERSYSRSPYGS----RSY 206
S P R SRS DYYSPPPRR RSISPR RY RSYSRSP RS
Sbjct: 61 RSRSPPPRRGRSRSRSGDYYSPPPRR-HHPRSISPREERYDGRRSYSRSPASDGSRGRSL 119
Query: 207 SPSRSRSRSL 216
+P R +SRSL
Sbjct: 120 TPVRGKSRSL 129
>gi|414589482|tpg|DAA40053.1| TPA: hypothetical protein ZEAMMB73_656721 [Zea mays]
Length = 110
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
EPRGFGF+QY DP DA+DAKYHMDG +LLGRE+ VVFAEENRKKP+++RARE+
Sbjct: 5 EPRGFGFIQYFDPEDASDAKYHMDGKMLLGREIAVVFAEENRKKPADIRAREK 57
>gi|388521979|gb|AFK49051.1| unknown [Lotus japonicus]
Length = 122
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 78/96 (81%), Gaps = 3/96 (3%)
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHYARGYSR 166
MDG +LLGRELTVVFAEENRKKP+EMRARER R RSYD RRSP YSRSP YAR YSR
Sbjct: 1 MDGQILLGRELTVVFAEENRKKPAEMRARERHSARERSYDYRRSPRGYSRSPRYARTYSR 60
Query: 167 SPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYG 202
SPDY +P PRR R SRSISPR RRY RSYS SPYG
Sbjct: 61 SPDY-TPSPRRRRYSRSISPRDRRYGRRSYSGSPYG 95
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 95/185 (51%), Gaps = 23/185 (12%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P+ LL+RNL D+ RP DLR F +FG LKDIYLPR++ +GEPRGFGFV+Y
Sbjct: 46 PSGLLIRNLPLDA----------RPNDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKY 95
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR 156
DAA+A M+ ++ GRE+ +VFAEENRK P EMR R D +R+ R R
Sbjct: 96 RYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPR 155
Query: 157 SPHYA-------------RGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGS 203
+ + R D YSP R SRS PR R + RSP
Sbjct: 156 RRYRSHSRSRSPPRRESRHSKVREDDLYSPRRRSRSISRSPLPRNEREYKSRNCRSPREE 215
Query: 204 RSYSP 208
R +P
Sbjct: 216 RVLTP 220
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRN+ RPED+R F ++G ++D+Y+P+D+YT EP+GF FV++
Sbjct: 7 ISLLVRNISRR----------LRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFR 56
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
+A DA+ ++DG + GR++ VVFA+E RK +MR RER
Sbjct: 57 SEREAEDARRNLDGVRIDGRDIRVVFAQERRKSTDQMRERER 98
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 10/97 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL+VRNL D R EDLR F ++G LKD+Y+PRDYYT PRGFGF+++
Sbjct: 51 VSLVVRNLPLD----------IRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFK 100
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
+ DA DA Y++D ++ GRE++V F+ E RK P +M
Sbjct: 101 ETRDAEDAMYNLDRSVVNGREISVTFSREGRKTPRDM 137
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 10/104 (9%)
Query: 32 RGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 91
R RDL TSLL RNL +KT + +DLR +FG ++DIYLP+D+YTG+PRG
Sbjct: 23 RERDLRTSLLFRNL------SKTTTA----DDLRHTTERFGPIRDIYLPKDFYTGDPRGL 72
Query: 92 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
GFV++ DP DA +A++ +DG L GR ++V FA+ RK+P + R
Sbjct: 73 GFVEFSDPKDAEEARHSLDGSTLAGRVISVQFAQHGRKRPEDYR 116
>gi|209879626|ref|XP_002141253.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556859|gb|EEA06904.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 99/192 (51%), Gaps = 32/192 (16%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRNLR F T P +R F ++G ++D+YLP DYYT PRGFGFV+Y+
Sbjct: 86 CSLLVRNLR---FETS-------PSRVRRHFERYGTVRDVYLPLDYYTRRPRGFGFVEYM 135
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
DP DA DA ++DG +L G + VV A + RK P MR + + R+SRS
Sbjct: 136 DPRDAEDAVNNLDGSVLDGSTIRVVVAHDRRKSPETMRKIQ----------KDAARFSRS 185
Query: 158 PHYARGYSR------SPDY---YSPPPRRG---RDSRSISPRYRRYRERSYSRSPYGSRS 205
Y+ + R + DY Y P R R+ S RRY +S SRSPY RS
Sbjct: 186 SGYSSRFDRPGGHPPAIDYRNRYRSEPYRHSSYREDDRYSRSKRRYPSKSASRSPYRGRS 245
Query: 206 YSPSRSRSRSLD 217
S RS S + D
Sbjct: 246 GSRDRSCSNNRD 257
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 10/105 (9%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
R L TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +
Sbjct: 6 RSLNTSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAY 55
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
VQ+ D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 56 VQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|195648951|gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 10/96 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+ LL+RN+ RPED+R F QFG +KD+YLPR+++T E RGFGFV++
Sbjct: 57 SGLLIRNI----------SLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFR 106
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSE 133
P DAA AK M ++ GRE+++V+AEENRK P E
Sbjct: 107 YPEDAAVAKREMHHQVIGGREISIVYAEENRKTPQE 142
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D R EDLR FG++G + D+Y+P DYYT PRGF +VQ+
Sbjct: 10 TSLFVRNIADD----------IRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D R EDLR FG++G + D+Y+P DYYT PRGF +VQ+
Sbjct: 10 TSLFVRNIADD----------IRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 10/106 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRNL +F T R +D++ F FG ++D+YLP D+ T +PRGF FV++
Sbjct: 33 VSLLVRNL---TFRT-------RVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFY 82
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR 143
DP DAA A+ +DGY L GR ++V++A+E RK+P EM +ER R
Sbjct: 83 DPGDAAHARDRLDGYNLDGRNISVLYAQEKRKRPDEMVHKERVEGR 128
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 68/102 (66%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ +S RPEDLR FG++G + D+Y+P D+YT +PRGF ++Q+
Sbjct: 10 TSLFVRNISDES----------RPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA + +D + GR++ + FA+ +RK P++M+++ER
Sbjct: 60 DVRDAEDALHSLDRKWVCGRQIEIQFAQGDRKTPNQMKSKER 101
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35; AltName:
Full=Splicing factor, arginine/serine-rich 13B; AltName:
Full=Splicing factor, arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL +RN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFIRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 19/123 (15%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ +S RPEDLR FG++G + D+Y+P D+YT +PRGF ++Q+
Sbjct: 10 TSLFVRNISDES----------RPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
D DA DA + +D + GR++ + FA+ +RK P++M+++E RRSP R SR
Sbjct: 60 DVRDAEDALHSLDRKWVCGRQIEIQFAQGDRKTPNQMKSKE---------RRSPGRSSRY 110
Query: 158 PHY 160
Y
Sbjct: 111 DDY 113
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKCICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus adamanteus]
Length = 234
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ RPEDLR FG++G + D+Y+P D+YT PRGF ++Q+
Sbjct: 10 TSLFVRNV----------ADATRPEDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ RPEDLR FG++G + D+Y+P D+YT PRGF ++Q+
Sbjct: 10 TSLFVRNV----------ADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ RPEDLR FG++G + D+Y+P D+Y+ PRGF +VQ+
Sbjct: 10 TSLFVRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ S EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDTQS----------EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDAFHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL +RN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFIRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D +A DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 DVREAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+ +E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKVKE 100
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++++A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQIKAKE 100
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
Length = 182
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
R+ P SLL+R L++D P +R F +FG +KD+YLP DYYT EPRGFGF
Sbjct: 8 RNQPMSLLIRKLKYD----------TSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGF 57
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
V++ DP DA A M+G + G + V A++ R P MR +E+
Sbjct: 58 VEFYDPKDAEQALKEMNGSEIDGNRIEVFVAQKGRSDPRLMRYKEK 103
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P SLL+R L+ F+T P +R F +FG +KD+YLP DYYT EPRGFGFV++
Sbjct: 11 PMSLLIRKLK---FNTS-------PSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEF 60
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
DP DA A M+G L G + V A++ R P MR +ER
Sbjct: 61 YDPKDAEQALKEMNGSELDGNRIEVFVAQKGRSDPRIMRYKER 103
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5 [Canis
lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ +D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVANDT----------RSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA ++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALRNLDRKWICGRQMEIQFAQGDRKTPNQMKAKE 100
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 96/197 (48%), Gaps = 30/197 (15%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRNLR F T P +R F ++G ++D+YLP DYYT PRGFGFV+Y+
Sbjct: 90 CSLLVRNLR---FETS-------PGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYM 139
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
DP DA DA +DG LL G + VV A + RK P MR +R R P RY
Sbjct: 140 DPRDAQDAVNRLDGSLLDGSTIRVVVAHDRRKSPETMRRIQRDSGRGPRMGGPPSRYDHR 199
Query: 158 P-------HYARGYSRSPDYYSPPPRRG-RDS----------RSISPRYRRYRERSYSRS 199
P H RG DYY + G RD S SP Y R RS SRS
Sbjct: 200 PSGGYPPEHGYRGGRYRDDYYGGRRQGGYRDDDRNYRPKRRYSSRSPSYHSPRGRSVSRS 259
Query: 200 PYGSRSYSPSRSRSRSL 216
PY R S SR S S+
Sbjct: 260 PY--RGGSISREHSHSI 274
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ + K P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDLKTPNQMKAKE 100
>gi|414877624|tpg|DAA54755.1| TPA: hypothetical protein ZEAMMB73_495943 [Zea mays]
Length = 474
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 78 YLPRDYYTGE--PRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
YL +D G FGF+QY DP DA+DAKYHMDG +LLGRE+ VVFAEENRKKP++MR
Sbjct: 201 YLHKDNEKGNWNLEDFGFIQYFDPEDASDAKYHMDGKMLLGREIAVVFAEENRKKPADMR 260
Query: 136 ARER 139
ARE+
Sbjct: 261 AREK 264
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 10/98 (10%)
Query: 42 VRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPAD 101
VRN DS RPEDLR FG++G + D+Y+P D+YT PRGF +VQ+ D D
Sbjct: 2 VRNCAGDS----------RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRD 51
Query: 102 AADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
A DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 52 AEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 89
>gi|348526131|ref|XP_003450574.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 257
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 17/115 (14%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL VRN+ +S RPEDLR FG++G + D+Y+P D+YT PRGF ++QY
Sbjct: 10 TSLFVRNIADES----------RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYP 59
Query: 97 ------IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSY 145
D DA DA +++D + GR++ + FA+ +RK P++M+A+ER RS+
Sbjct: 60 LFFHMFEDVRDAEDALHNLDRKWVCGRQIEIQFAQGDRKTPNQMKAKERHSPRSF 114
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
R+ P SLL+R L++D P +R F ++G +KD+YLP DYYT EPRGFGF
Sbjct: 8 RNQPMSLLIRKLKYD----------TSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGF 57
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
V++ DP DA A M+G + G + V A++ R P MR +E+
Sbjct: 58 VEFYDPKDAEQALKEMNGSEIDGNRIEVFVAQKGRSDPRLMRYKEK 103
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 10/105 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ RPEDLR FG++G + D+Y+P D+Y PRGF ++Q+
Sbjct: 10 TSLFVRNV----------GDATRPEDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRS 142
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER S
Sbjct: 60 DVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERHAS 104
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
R+ P SLL+R L++D P +R F +FG +KD+YLP DYYT EPRGFGF
Sbjct: 8 RNQPMSLLIRKLKYD----------TSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGF 57
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
V++ DP DA A M+G + G + V A++ R P MR +E+
Sbjct: 58 VEFYDPKDAEVALKEMNGAEIDGNRVEVFVAQKGRSDPRVMRYKEK 103
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL +RN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFIRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D A DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 DVRGAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+SL VRN+ +S RPEDLR FG++G + D+Y+P D+Y+ PRGF ++Q+
Sbjct: 10 SSLFVRNISDES----------RPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA +++D + GR++ + FA+ +RK P +M+ +ER
Sbjct: 60 DVRDAEDALHNLDRKWVCGRQIEIQFAQGDRKTPGQMKNKER 101
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPIDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + G ++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGHQIEIQFAQGDRKTPNQMKAKE 100
>gi|159463786|ref|XP_001690123.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284111|gb|EDP09861.1| predicted protein [Chlamydomonas reinhardtii]
Length = 118
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 10/104 (9%)
Query: 32 RGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 91
R RD TSLL RNL S +T T EDLR ++G ++DIYLP+D+ TGEPRG
Sbjct: 24 RERDPSTSLLFRNL---SKTTTT-------EDLRHYAERYGPIRDIYLPKDFQTGEPRGL 73
Query: 92 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
GFV++ DP DA +A++ MDG + GR ++V FA+ RK+P + R
Sbjct: 74 GFVEFSDPKDAEEARHCMDGSTVAGRVISVTFAQHGRKRPEDYR 117
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+SL VRN+ D R EDLR FG++G + D+Y+P DYY PRGF +VQ+
Sbjct: 10 SSLFVRNIADD----------IRSEDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P +M+A+E
Sbjct: 60 DVRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPHQMKAKE 100
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|449684562|ref|XP_002161704.2| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Hydra magnipapillata]
Length = 131
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 62/101 (61%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL +RNL S R +DLR F ++G ++DIY+P DYYT EPRGF +VQ+
Sbjct: 12 TSLYIRNL----------SSSTRSDDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQFE 61
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA YH L GREL + +AE +RK P +MR RE
Sbjct: 62 DIRDAEDALYHESHARLHGRELDIQYAEGDRKTPGQMRTRE 102
>gi|384247695|gb|EIE21181.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 184
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 10/103 (9%)
Query: 31 GRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRG 90
GR R SLLVRNL +S+ +DLR ++GRL+D+Y+P+DYY+GEPRG
Sbjct: 7 GRERADGCSLLVRNLS---------RSVTL-DDLRYVAEKYGRLRDVYIPKDYYSGEPRG 56
Query: 91 FGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSE 133
GF+++ DP DA DA Y +D ++ G+E++VV A + RK+P +
Sbjct: 57 IGFLEFTDPRDAEDAIYGLDRKVIQGKEVSVVLALQGRKRPDD 99
>gi|413955615|gb|AFW88264.1| hypothetical protein ZEAMMB73_484317, partial [Zea mays]
Length = 148
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 65/85 (76%), Gaps = 12/85 (14%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGR--GRDLPTSLLVRNLRHDSFSTKTYKSICR 60
GRSY++SPSPPR Y RR RSPSPRG YGGR RDLPTSLLVRNLR D CR
Sbjct: 73 GRSYNHSPSPPRGYRRRTRSPSPRGRYGGRDTDRDLPTSLLVRNLRRD----------CR 122
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYT 85
P+DLR PFG+FG +KDIYLP+DYYT
Sbjct: 123 PDDLRRPFGKFGPVKDIYLPKDYYT 147
>gi|327261517|ref|XP_003215576.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Anolis
carolinensis]
Length = 261
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 66/107 (61%), Gaps = 15/107 (14%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL VRN+ RPEDLR FG++G + D+Y+P D+YT PRGF ++QY
Sbjct: 10 TSLFVRNV----------ADATRPEDLRHEFGRYGPVVDVYVPLDFYTRRPRGFAYIQYP 59
Query: 97 ----IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P++M+++ER
Sbjct: 60 LFMFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPNQMKSKER 106
>gi|443711870|gb|ELU05439.1| hypothetical protein CAPTEDRAFT_124300 [Capitella teleta]
Length = 135
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 14/106 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL VRN+ R E+LR FG++G + D+YLP D+YT PRGF ++QY
Sbjct: 10 TSLYVRNV----------PDTTRSEELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQYP 59
Query: 97 ---IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
IDP DA DA YH+D G +L + FA +RK PS+MR +ER
Sbjct: 60 SFSIDPRDAEDALYHLDRTRFFGCDLEIEFARGDRKTPSQMRTKER 105
>gi|297478612|ref|XP_002690241.1| PREDICTED: uncharacterized protein LOC787762 [Bos taurus]
gi|296484064|tpg|DAA26179.1| TPA: serine-arginine repressor protein (35kDa) (SRrp35)-like [Bos
taurus]
Length = 268
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 17/109 (15%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL VRN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQY
Sbjct: 10 TSLFVRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYP 59
Query: 97 ------IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 LFYFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
Length = 308
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
++ P SLL+R L+ D P +R F +FG +KD+YLP DYYT EPRGFGF
Sbjct: 8 KNQPMSLLIRKLKFD----------TSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGF 57
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
V++ D DA A M+G + G + V A++ R P MR +E+
Sbjct: 58 VEFYDAKDAEQALKEMNGSEIDGSRIEVFVAQKGRSDPRHMRYKEK 103
>gi|224002947|ref|XP_002291145.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972921|gb|EED91252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 16/115 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRN+ + +DL+ FG+ G ++D+Y+PRD+++ +P+GF F++Y
Sbjct: 189 VSLLVRNVNGE----------ISTQDLQMAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYA 238
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPP 152
P A +A+ M+ +++ GRE+ VV+A+E RK P+EMR R DGR P
Sbjct: 239 TPEQAREARDEMNHFMMKGREIEVVYAQEKRKTPNEMRG------RVVDGREVRP 287
>gi|307133716|ref|NP_001182514.1| splicing factor, arginine/serine-rich 13B [Macaca mulatta]
gi|402867628|ref|XP_003897943.1| PREDICTED: serine/arginine-rich splicing factor 12 [Papio anubis]
Length = 267
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 16/108 (14%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL +RN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQY
Sbjct: 10 TSLFIRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYP 59
Query: 97 -----IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 LLFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 107
>gi|344264100|ref|XP_003404132.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Loxodonta
africana]
Length = 387
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 42 VRNLRHDSFSTKTYKSICR-PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 100
VR ++ F+ + + PEDLR FG++G + D+Y+P D+YT PRGF +VQ+ D
Sbjct: 129 VRGAQNAHFAVAEVPPLLQQPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 188
Query: 101 DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 189 DAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 227
>gi|209878256|ref|XP_002140569.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556175|gb|EEA06220.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 244
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
RD SLL+R+LR F T P +R F +FG+++D+YLP D++T PRGFGF
Sbjct: 9 RDPRRSLLIRSLR---FETP-------PSLVRRVFERFGQIRDVYLPVDFHTKRPRGFGF 58
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER---FRSRSYDGRRS 150
V+Y++ +DA A M+G L G ++ V FA+E RK P MR R+ + RS D R +
Sbjct: 59 VEYVEESDALAAIQRMNGANLDGSQIHVTFAQEGRKSPESMRHRDNENYYTRRSIDSRYN 118
Query: 151 PPRYSRSPHYARGYSRSPDYY 171
Y P+ RS D++
Sbjct: 119 SSHYRFDPYRRHSSYRSRDFH 139
>gi|296198765|ref|XP_002746858.1| PREDICTED: serine/arginine-rich splicing factor 12 [Callithrix
jacchus]
Length = 268
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 17/109 (15%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL +RN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQY
Sbjct: 10 TSLFIRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYP 59
Query: 97 ------IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 LFYFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|114608450|ref|XP_518634.2| PREDICTED: serine/arginine-rich splicing factor 12 [Pan
troglodytes]
Length = 268
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 17/109 (15%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL +RN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQY
Sbjct: 10 TSLFIRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYP 59
Query: 97 ------IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 LFYFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|219118652|ref|XP_002180094.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408351|gb|EEC48285.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 106
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL+RN+ D + +DL FG+ G ++D+Y+PRD+++ +P+GF F++Y
Sbjct: 18 VSLLIRNVAPD----------IQSQDLLTAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYA 67
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
A +A+ MD +++ GREL VVFA+E RK P+EMR
Sbjct: 68 TAEQAREARDEMDRFVVRGRELEVVFAQERRKTPTEMR 105
>gi|448878238|gb|AGE46082.1| arginine/serine-rich splicing factor SCL25A transcript II [Zea
mays]
Length = 80
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 65/85 (76%), Gaps = 12/85 (14%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRG--RDLPTSLLVRNLRHDSFSTKTYKSICR 60
GRSY++SPSPPR Y RR RSPSPRG YGGR RDLPTSLLVRNLR D CR
Sbjct: 2 GRSYNHSPSPPRGYRRRTRSPSPRGRYGGRDTDRDLPTSLLVRNLRRD----------CR 51
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYT 85
P+DLR PFG+FG +KDIYLP+DYYT
Sbjct: 52 PDDLRRPFGKFGPVKDIYLPKDYYT 76
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL +RN+ +S RPEDLR FG++G + D+Y+P D+Y+ PRGF ++Q+
Sbjct: 10 TSLFIRNISDES----------RPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+ +E
Sbjct: 60 DVRDAEDALHNLDRKWVCGRQIEIQFAQGDRKTPNQMQGKE 100
>gi|297678669|ref|XP_002817185.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Pongo abelii]
Length = 261
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL +RN+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFIRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA D + + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 DVRDAEDXLFITHRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL+VRNL +D+ P+ +R F ++G ++D+YLP DY +G PRGFGFV++
Sbjct: 68 CSLIVRNLNYDT----------SPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEFC 117
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
DP D +AK MDG ++ G + V A+ RK P MR
Sbjct: 118 DPRDVVEAKNAMDGKVVDGNAIQVDIAQRGRKSPRTMR 155
>gi|326933179|ref|XP_003212685.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Meleagris
gallopavo]
Length = 278
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Query: 9 SPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTY-----KSICR--- 60
+P PR R + P H G G P +L R ++F Y K CR
Sbjct: 33 APEIPRASFRYCGNCRPLVHAGCYGLRPPVALSGRGETENAFLRNNYVVAKLKRTCRGLA 92
Query: 61 -----PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 115
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D +
Sbjct: 93 ERSSQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWIC 152
Query: 116 GRELTVVFAEENRKKPSEMRARE 138
GR++ + FA+ +RK P++M+A+E
Sbjct: 153 GRQIEIQFAQGDRKTPNQMKAKE 175
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R DLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+ +E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKGKE 100
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
S+LVRN+ Y + EDLR F +FG L+D+Y+PRDYYT RGFGF+++
Sbjct: 21 VSVLVRNI------PLNYTA----EDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFR 70
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA +A Y D +L GRE+ V ++E RK P EM E
Sbjct: 71 DARDADEAIYQTDRTMLDGREINVCLSKEGRKTPREMMILE 111
>gi|82541600|ref|XP_725030.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479883|gb|EAA16595.1| PR264 [Plasmodium yoelii yoelii]
Length = 121
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P SLL+R L+ ++ P +R F +FG +KD+YLP DYYT EPRGFGFV++
Sbjct: 11 PMSLLIRKLKFNT----------SPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEF 60
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSP 151
DP DA +A M+G L + V A++ R P MR +ER Y RR P
Sbjct: 61 YDPKDAXEALKEMNGXELXXNRIEVFVAQKGRSDPRIMRYKERGGGSGYGHRRYP 115
>gi|448878240|gb|AGE46083.1| arginine/serine-rich splicing factor SCL25A transcript III [Zea
mays]
Length = 77
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 65/85 (76%), Gaps = 12/85 (14%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRG--RDLPTSLLVRNLRHDSFSTKTYKSICR 60
GRSY++SPSPPR Y RR RSPSPRG YGGR RDLPTSLLVRNLR D CR
Sbjct: 2 GRSYNHSPSPPRGYRRRTRSPSPRGRYGGRDTDRDLPTSLLVRNLRRD----------CR 51
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYT 85
P+DLR PFG+FG +KDIYLP+DYYT
Sbjct: 52 PDDLRRPFGKFGPVKDIYLPKDYYT 76
>gi|126310597|ref|XP_001376489.1| PREDICTED: serine/arginine-rich splicing factor 12-like
[Monodelphis domestica]
Length = 257
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 19/111 (17%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL VRN+ RPEDLR FG++G + D+Y+P D+YT PRGF ++QY
Sbjct: 10 TSLFVRNV----------TDATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYP 59
Query: 97 --------IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 LFHSLVIFEDVRDAEDALYNLNKKWVCGRQIEIQFAQGDRKTPGQMKSKER 110
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 13/106 (12%)
Query: 29 YGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEP 88
G RG SLLVRN+ RPED+R F ++G ++D+Y+P+DYYT EP
Sbjct: 226 MGDRG---GISLLVRNISRR----------LRPEDIRKEFERYGEVRDVYIPKDYYTKEP 272
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
+GF FV++ +A DA+ ++DG + GR++ VVFA+E RK +M
Sbjct: 273 KGFAFVEFRSEREADDARRNLDGVRIDGRDIRVVFAQERRKSTDQM 318
>gi|354485618|ref|XP_003504980.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cricetulus
griseus]
Length = 172
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%)
Query: 52 TKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDG 111
+ ++ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D
Sbjct: 3 VEILEACFRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDR 62
Query: 112 YLLLGRELTVVFAEENRKKPSEMRARE 138
+ GR++ + FA+ +RK P++M+A+E
Sbjct: 63 KWICGRQIEIQFAQGDRKTPNQMKAKE 89
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 123
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQ+
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+ +E
Sbjct: 60 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKDKE 100
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL+RN+ R ++LR F +FG ++D+Y+PRD++T E +GF FV++
Sbjct: 7 ISLLIRNISRR----------MRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFK 56
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
+ DA +A ++DG L GRE+TVVFA+E RK EM
Sbjct: 57 NERDAEEALRNLDGSRLDGREITVVFAQEKRKSTDEM 93
>gi|119568946|gb|EAW48561.1| serine-arginine repressor protein (35 kDa), isoform CRA_a [Homo
sapiens]
Length = 262
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 11/103 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQY 96
TSL +RN+ RPEDLR FG++G + D+Y+P D+YT PRGF + V +
Sbjct: 10 TSLFIRNV----------ADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIF 59
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 EDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 102
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL VRN+ + RP+DLR F +FG + D+Y+P DYY PRGF ++Q+
Sbjct: 8 ASLFVRNIADN----------IRPDDLRREFVRFGPVSDVYIPLDYYNRRPRGFAYIQFE 57
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA Y MD + GR + V FA +RK P++MR +E
Sbjct: 58 DTRDAEDALYAMDRKWICGRYIEVQFAAGDRKTPNQMRTKE 98
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
RD SLL+R+LR D T S+ R E F +FG ++D+YLP DY + PRGFG
Sbjct: 8 NRDPRRSLLIRSLRFD-----TPTSLVRRE-----FERFGAIRDVYLPLDYRSRRPRGFG 57
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
FV+Y++ DA A MDG L G + V FA+E RK P MR RE
Sbjct: 58 FVEYVEEEDARAALEKMDGATLDGVTINVTFAQEGRKSPESMRHRE 103
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
RD SLL+R+LR D T S+ R E F +FG ++D+YLP DY + PRGFG
Sbjct: 8 NRDPRRSLLIRSLRFD-----TPTSLVRRE-----FERFGAIRDVYLPLDYRSRRPRGFG 57
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
FV+Y++ DA A MDG L G + V FA+E RK P MR RE
Sbjct: 58 FVEYVEEEDARAALEKMDGATLDGVTINVTFAQEGRKSPESMRHRE 103
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+SL +RN+ + RPEDLR FG++G + D+Y+P DYY PRGF +VQ+
Sbjct: 32 SSLFIRNVPDGT----------RPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFE 81
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
D DA DA Y +D GREL + FA+ +RK PSEM
Sbjct: 82 DLRDAEDAMYSLDRTRFYGRELEIEFAQGDRKTPSEM 118
>gi|410966510|ref|XP_003989775.1| PREDICTED: serine/arginine-rich splicing factor 10 [Felis catus]
Length = 191
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 57/79 (72%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++
Sbjct: 40 RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQI 99
Query: 120 TVVFAEENRKKPSEMRARE 138
+ FA+ +RK P++M+A+E
Sbjct: 100 EIQFAQGDRKTPNQMKAKE 118
>gi|70928216|ref|XP_736352.1| Ser/Arg-rich splicing factor [Plasmodium chabaudi chabaudi]
gi|56510813|emb|CAH84192.1| Ser/Arg-rich splicing factor, putative [Plasmodium chabaudi
chabaudi]
Length = 129
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P SLL+R L+ ++ P +R F +FG +KD+YLP DYYT EPRGFGFV++
Sbjct: 11 PMSLLIRKLKFNT----------SPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEF 60
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
DP DA +A M+G + G + V A++ R P MR +E
Sbjct: 61 YDPKDAEEALKEMNGSEIDGNRIEVFVAQKGRSDPRVMRYKE 102
>gi|301774570|ref|XP_002922705.1| PREDICTED: splicing factor, arginine/serine-rich 13B-like
[Ailuropoda melanoleuca]
Length = 269
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGY 112
RPEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 23 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 82
Query: 113 LLLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 83 WVCGRQIEIQFAQGDRKTPGQMKSKER 109
>gi|351699563|gb|EHB02482.1| 35 kDa SR repressor protein, partial [Heterocephalus glaber]
Length = 246
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY------IDPADAADAKYHMDGYL 113
RPEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKW 60
Query: 114 LLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 61 VCGRQIEIQFAQGDRKTPGQMKSKER 86
>gi|226481705|emb|CAX79118.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 46 RHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 105
R S + CR +DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA
Sbjct: 4 RSSSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
Query: 106 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
Y+MD +GR++ V F RK P+EMR +ER
Sbjct: 64 HYYMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 10/106 (9%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
RD SLL+R+LR D T S+ R E F +FG ++D+YLP DY + PRGFG
Sbjct: 22 NRDPRRSLLIRSLRFD-----TPTSLVRRE-----FERFGAIRDVYLPLDYRSRRPRGFG 71
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
FV+Y++ DA A MDG L G + V FA+E RK P MR RE
Sbjct: 72 FVEYVEEEDARAALEKMDGATLDGVTINVTFAQEGRKSPESMRHRE 117
>gi|29841102|gb|AAP06115.1| similar to NM_080743 serine-arginine repressor protein (35 kDa) in
Homo sapiens [Schistosoma japonicum]
gi|226476576|emb|CAX72180.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481266|emb|CAX79098.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481268|emb|CAX79099.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481270|emb|CAX79100.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481274|emb|CAX79102.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481276|emb|CAX79103.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481278|emb|CAX79104.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481280|emb|CAX79105.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481282|emb|CAX79106.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481284|emb|CAX79107.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481286|emb|CAX79108.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481288|emb|CAX79109.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481292|emb|CAX79111.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481294|emb|CAX79112.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481300|emb|CAX79114.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481699|emb|CAX79115.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481701|emb|CAX79116.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 46 RHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 105
R S + CR +DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA
Sbjct: 4 RSSSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
Query: 106 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
Y+MD +GR++ V F RK P+EMR +ER
Sbjct: 64 HYYMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|226476570|emb|CAX72177.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481290|emb|CAX79110.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481296|emb|CAX79113.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 46 RHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 105
R S + CR +DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA
Sbjct: 4 RSSSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDA 63
Query: 106 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
Y+MD +GR++ V F RK P+EMR +ER
Sbjct: 64 HYYMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|226481272|emb|CAX79101.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 46 RHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADA 105
R S + CR +DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA
Sbjct: 4 RSSSLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFGNPRDAEDA 63
Query: 106 KYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
Y+MD +GR++ V F RK P+EMR +ER
Sbjct: 64 HYYMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|426222784|ref|XP_004005562.1| PREDICTED: serine/arginine-rich splicing factor 10 [Ovis aries]
Length = 225
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 63/99 (63%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
L +R S S + S EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D
Sbjct: 44 LPLRRWGEPSSSLPLFGSSLGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDV 103
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 104 RDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 142
>gi|168042827|ref|XP_001773888.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674732|gb|EDQ61236.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 370
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 94/212 (44%), Gaps = 75/212 (35%)
Query: 1 MRGRSYSYS-----PSPPRD-YGRRYRSPSPRGHYGGRGR-------DLPTSLLVRNLRH 47
MRGRS YS SPPR YG R RS SP GRGR + PTSLLVRN+
Sbjct: 1 MRGRSPYYSDRRGYSSPPRSGYGGRRRSLSP---LPGRGRGDYVREPEPPTSLLVRNIPR 57
Query: 48 D-------------------------------SFSTKTYKSICRPEDLRGPFGQFGRL-- 74
D + + + +C E G G L
Sbjct: 58 DFTADDLRIPFERYGAIKDVYLPRDYYTGLAVNITDGPLEMLCTEELQEGAIGLHVSLSK 117
Query: 75 ------------KDIYLPRDYYTG--------------EPRGFGFVQYIDPADAADAKYH 108
K+ +++ G +PRGFGFVQ++DP DAA+A+Y+
Sbjct: 118 GELVFMHDRADVKNFAYFQNHSVGSLDFVLVGIHDSLRQPRGFGFVQFLDPQDAAEAQYY 177
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARERF 140
+D + GRE+T+VFAEENRK+P EMR +ER
Sbjct: 178 LDHEFIAGREITIVFAEENRKRPQEMRLKERV 209
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SL VRN+ D ++L F ++G +KD+Y+PRDYY PRGF +VQ+ D
Sbjct: 12 SLFVRNIADD----------IDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFAD 61
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
DA DA+ MDG + GR + V FA+ +RK P MR R+
Sbjct: 62 IHDAEDAQEGMDGRKVCGRFIDVQFAKGDRKSPGSMRTRD 101
>gi|256076749|ref|XP_002574672.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360045341|emb|CCD82889.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 210
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
CR +DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR+
Sbjct: 17 CRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRD 76
Query: 119 LTVVFAEENRKKPSEMRARER 139
+ V F RK P+EMR +ER
Sbjct: 77 IEVEFTRGYRKTPAEMRLKER 97
>gi|156407025|ref|XP_001641345.1| predicted protein [Nematostella vectensis]
gi|156228483|gb|EDO49282.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 12/94 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG--FVQ 95
+S+ VRNL D+ RP+DLR FG++GR+ D+Y+P DYYT EPRGF ++
Sbjct: 10 SSIYVRNLHPDT----------RPDDLRRMFGKYGRITDVYIPLDYYTREPRGFCYIYIT 59
Query: 96 YIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 129
+ D DA DA Y++D +LLGREL V FAE +RK
Sbjct: 60 FEDIRDAEDALYYLDRAMLLGRELEVQFAEGDRK 93
>gi|226481703|emb|CAX79117.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 115
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
CR +DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR+
Sbjct: 17 CRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRD 76
Query: 119 LTVVFAEENRKKPSEMRARER 139
+ V F RK P+EMR +ER
Sbjct: 77 IEVEFTRGYRKTPAEMRLKER 97
>gi|338721847|ref|XP_001504243.3| PREDICTED: serine/arginine-rich splicing factor 10 [Equus caballus]
Length = 153
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 4 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 63
Query: 122 VFAEENRKKPSEMRARE 138
FA+ +RK P++M+A+E
Sbjct: 64 QFAQGDRKTPNQMKAKE 80
>gi|226476572|emb|CAX72178.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226476574|emb|CAX72179.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 125
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
CR +DLR FG++GR+ D+ +P D++TG +G+ F+++ +P DA DA Y+MD +GR+
Sbjct: 17 CRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYYMDHTRFMGRD 76
Query: 119 LTVVFAEENRKKPSEMRARER 139
+ V F RK P+EMR +ER
Sbjct: 77 IEVEFTRGYRKTPAEMRLKER 97
>gi|395849978|ref|XP_003797581.1| PREDICTED: serine/arginine-rich splicing factor 12 [Otolemur
garnettii]
Length = 366
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY--------IDPADAADAKYHMDG 111
RPEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 119 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFTLVIFEDVRDAEDALYNLNR 178
Query: 112 YLLLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 179 KWVCGRQIEIQFAQGDRKTPGQMKSKER 206
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 56/77 (72%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 109 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 168
Query: 122 VFAEENRKKPSEMRARE 138
FA+ +RK P++M+A+E
Sbjct: 169 QFAQGDRKTPNQMKAKE 185
>gi|156084456|ref|XP_001609711.1| RNA recognition motif containing protein [Babesia bovis]
gi|154796963|gb|EDO06143.1| RNA recognition motif containing protein [Babesia bovis]
Length = 253
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 10/97 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S+L+RNL++ + R ++R F FG+++D+YLP+DY +G PRGFGFV++++
Sbjct: 10 SVLIRNLKYST----------RASEVREAFECFGKIRDVYLPQDYSSGMPRGFGFVEFVE 59
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
A A DA MD G+ +T A++ RK P+ MR
Sbjct: 60 EAAALDAIRKMDNTTFNGKVITCCEAQDRRKSPNSMR 96
>gi|291396606|ref|XP_002714518.1| PREDICTED: serine-arginine repressor protein-like [Oryctolagus
cuniculus]
Length = 248
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGY 112
+PEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 2 KPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 61
Query: 113 LLLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 62 WVCGRQIEIQFAQGDRKTPGQMKSKER 88
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 32 RGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 91
RG PTS+ VRN+ HD R EDLR F ++G + D+Y+P DYYT EPRGF
Sbjct: 4 RGGRTPTSVFVRNVHHD----------VRSEDLRRIFEKYGDISDVYIPLDYYTREPRGF 53
Query: 92 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
+VQ+ DA DA +DG L GR++ A RK P +MR ++
Sbjct: 54 AYVQFDYEDDAEDAVDGLDGTTLFGRQIFCKNARGGRKTPHQMRYKD 100
>gi|281344246|gb|EFB19830.1| hypothetical protein PANDA_011704 [Ailuropoda melanoleuca]
Length = 241
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRE 118
RPEDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 119 LTVVFAEENRKKPSEMRARER 139
+ + FA+ +RK P +M+++ER
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|402853376|ref|XP_003891372.1| PREDICTED: serine/arginine-rich splicing factor 10 [Papio anubis]
Length = 261
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 11/101 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRG + +
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGL-LITFE 58
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
D DA DA +++D + GR++ + FA+ +RK P++M+A+E
Sbjct: 59 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 99
>gi|397504738|ref|XP_003822938.1| PREDICTED: serine/arginine-rich splicing factor 12 [Pan paniscus]
gi|426353976|ref|XP_004044448.1| PREDICTED: serine/arginine-rich splicing factor 12 [Gorilla gorilla
gorilla]
Length = 257
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 7/90 (7%)
Query: 57 SICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHM 109
++ +PEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y++
Sbjct: 8 TMKQPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNL 67
Query: 110 DGYLLLGRELTVVFAEENRKKPSEMRARER 139
+ + GR++ + FA+ +RK P +M+++ER
Sbjct: 68 NRKWVCGRQIEIQFAQGDRKTPGQMKSKER 97
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S L+RNLR FST P+ +R F +FG+++D+YLP D+ T PRGFGFV++ D
Sbjct: 8 STLLRNLR---FSTS-------PQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYD 57
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
ADA DA MD L G +T A++ RK PS M
Sbjct: 58 KADALDAVRAMDNTELDGSVITCCIAQDRRKSPSSM 93
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRNL++++ P+ LR F +FG ++D+YLP DYYT +PRGFGFV++
Sbjct: 12 ASLLVRNLKYET----------SPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVEFF 61
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
+DA +A M GY L G ++ V A+ R P +M
Sbjct: 62 SHSDADEAMREMFGYELDGNKIEVFVAKHGRSDPYQM 98
>gi|68065706|ref|XP_674837.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493667|emb|CAH97904.1| conserved hypothetical protein [Plasmodium berghei]
Length = 245
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 11/98 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL+RNL SF T P+ +R F FG+++D+YLP D+YT PRGFGFV+Y
Sbjct: 6 CSLLIRNL---SFET--------PDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYY 54
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
DP A +A ++ + G+E+ ++ A+ RK P M+
Sbjct: 55 DPKHAKEALNILNNSKIDGKEIRIIVAQNRRKSPDTMK 92
>gi|440911383|gb|ELR61059.1| Serine/arginine-rich splicing factor 12, partial [Bos grunniens
mutus]
Length = 241
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRE 118
RPEDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 119 LTVVFAEENRKKPSEMRARER 139
+ + FA+ +RK P +M+++ER
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|410959688|ref|XP_003986434.1| PREDICTED: serine/arginine-rich splicing factor 12 [Felis catus]
Length = 285
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 7/90 (7%)
Query: 57 SICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHM 109
++ +PEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y++
Sbjct: 36 NLYKPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNL 95
Query: 110 DGYLLLGRELTVVFAEENRKKPSEMRARER 139
+ + GR++ + FA+ +RK P +M+++ER
Sbjct: 96 NRKWVCGRQIEIQFAQGDRKTPGQMKSKER 125
>gi|332218114|ref|XP_003258205.1| PREDICTED: serine/arginine-rich splicing factor 12 [Nomascus
leucogenys]
Length = 249
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGY 112
+PEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 3 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 62
Query: 113 LLLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 63 WVCGRQIEIQFAQGDRKTPGQMKSKER 89
>gi|431838154|gb|ELK00086.1| 35 kDa SR repressor protein, partial [Pteropus alecto]
Length = 241
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRE 118
RPEDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 119 LTVVFAEENRKKPSEMRARER 139
+ + FA+ +RK P +M+++ER
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|70942643|ref|XP_741463.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519859|emb|CAH77253.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 254
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL+RNL SF T P+ +R F FG+++D+YLP D+YT PRGFGFV+Y
Sbjct: 6 CSLLIRNL---SFETS-------PDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYY 55
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
DP A +A ++ + G+E+ ++ A+ RK P M+
Sbjct: 56 DPKHAKEALNILNNSKIDGKEIRIIVAQNRRKSPDTMK 93
>gi|355561899|gb|EHH18531.1| hypothetical protein EGK_15157, partial [Macaca mulatta]
gi|355757706|gb|EHH61231.1| hypothetical protein EGM_19190, partial [Macaca fascicularis]
Length = 241
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF-VQYIDPADAADAKYHMDGYLLLGRE 118
RPEDLR FG++G + D+Y+P D+YT PRGF + V + D DA DA Y+++ + GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 119 LTVVFAEENRKKPSEMRARER 139
+ + FA+ +RK P +M+++ER
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|348563359|ref|XP_003467475.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Cavia
porcellus]
Length = 422
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY------IDPADAADAKYHMDGYL 113
RPEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 177 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKW 236
Query: 114 LLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 237 VCGRQIEIQFAQGDRKTPGQMKSKER 262
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S L+RNLR FST P+ +R F +FG+++D+YLP D+ T PRGFGFV++ D
Sbjct: 8 STLLRNLR---FSTS-------PQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYD 57
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
ADA DA MD L G +T A++ RK PS M
Sbjct: 58 KADALDAVRAMDNTELDGSVITCCIAQDRRKSPSSM 93
>gi|395534618|ref|XP_003769337.1| PREDICTED: serine/arginine-rich splicing factor 12 [Sarcophilus
harrisii]
Length = 317
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 9/92 (9%)
Query: 57 SICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY---------IDPADAADAKY 107
+ RPEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y
Sbjct: 79 NTIRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFHSLVIFEDVRDAEDALY 138
Query: 108 HMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 139 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 170
>gi|403261884|ref|XP_003923335.1| PREDICTED: serine/arginine-rich splicing factor 12 [Saimiri
boliviensis boliviensis]
Length = 271
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 7/87 (8%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-------IDPADAADAKYHMDGY 112
+PEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 25 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 84
Query: 113 LLLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 85 WVCGRQIEIQFAQGDRKTPGQMKSKER 111
>gi|194685575|ref|XP_001788719.1| PREDICTED: serine/arginine-rich splicing factor 12, partial [Bos
taurus]
Length = 145
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 17/109 (15%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL VRN+ + RPEDLR FG++G + D+Y+P D+YT PRGF +VQY
Sbjct: 10 TSLFVRNVADAT----------RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYP 59
Query: 97 ------IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA DA Y+++ + GR++ + FA+ +RK P +M+++ER
Sbjct: 60 LFYFIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|448878344|gb|AGE46135.1| arginine/serine-rich splicing factor SCL25A transcript III
[Sorghum bicolor]
Length = 78
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 66/83 (79%), Gaps = 10/83 (12%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPE 62
GRSY YSPSPPR Y RR RSPSPRG YGGRGRDLPTSLLVRNLR D CRP+
Sbjct: 2 GRSYDYSPSPPRGYRRRTRSPSPRGRYGGRGRDLPTSLLVRNLRRD----------CRPD 51
Query: 63 DLRGPFGQFGRLKDIYLPRDYYT 85
DLR PFG+FGR+KDIYLP+DYYT
Sbjct: 52 DLRRPFGKFGRVKDIYLPKDYYT 74
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 10/95 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+SL +RN+ RP+DLR FG++G L D+Y+P DYYT PRGF +VQ+
Sbjct: 11 SSLFIRNV----------PDGTRPDDLRSLFGKYGPLTDVYIPVDYYTRRPRGFAYVQFE 60
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
D DA DA Y +D GREL + FA+ +RK PS
Sbjct: 61 DLRDAEDAMYSLDRTRFYGRELEIEFAQGDRKTPS 95
>gi|294947288|ref|XP_002785313.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239899086|gb|EER17109.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 281
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 12/108 (11%)
Query: 30 GGRG--RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGE 87
GGRG R+ SLLVRNL + P LR F +FG ++D+Y+P DYY+
Sbjct: 135 GGRGGAREGSCSLLVRNLPDE----------VNPMRLRDAFERFGYVRDVYIPLDYYSKR 184
Query: 88 PRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
PRGFGFV++ DP DA +A+ MDG L + V A++ RK P MR
Sbjct: 185 PRGFGFVEFDDPRDADEARDAMDGQRLGSNYVEVEVAKQRRKSPRTMR 232
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
RP+DLR F Q G ++D+Y+P DYYT E RGF +V++ DA DA ++G +LGR
Sbjct: 25 ARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRELNGTSILGRR 84
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY-SRSPH 159
+ V +AE RK +EMRAR+ SY+ R RY SRSP+
Sbjct: 85 IEVEWAEGQRKTKTEMRARD-----SYNSYRVRNRYRSRSPY 121
>gi|241100004|ref|XP_002409732.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492805|gb|EEC02446.1| conserved hypothetical protein [Ixodes scapularis]
Length = 211
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 11/98 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
+SL VRNL + RPEDLR F + G L D+Y+P DY+T PRGFG+VQY
Sbjct: 11 SSLFVRNLPDGT----------RPEDLRSFFSKHGPLTDVYIPMDYHTRRPRGFGYVQYP 60
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
+ DA DAKY +D GRE+ + FA +RK P+EM
Sbjct: 61 LYLRDAEDAKYALDKARFCGREIEIEFARGDRKTPTEM 98
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain Shintoku]
Length = 267
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S LVRNLR FST P+ +R F +FG+++D+YLP D+ T PRGFGFV+Y +
Sbjct: 8 STLVRNLR---FSTT-------PQVVREAFERFGKIRDVYLPLDFNTKRPRGFGFVEYYE 57
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
+DA DA MD L G + A++ RK PS M
Sbjct: 58 KSDAVDAVKAMDNTDLDGSIINCCLAQDRRKSPSSM 93
>gi|338710589|ref|XP_001915964.2| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Equus caballus]
Length = 284
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 9/88 (10%)
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY---------IDPADAADAKYHMDG 111
PEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 37 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLSYRLVIFEDVRDAEDALYNLNR 96
Query: 112 YLLLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 97 KWVCGRQIEIQFAQGDRKTPGQMKSKER 124
>gi|73973899|ref|XP_532229.2| PREDICTED: serine/arginine-rich splicing factor 12 [Canis lupus
familiaris]
Length = 326
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 8/88 (9%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY--------IDPADAADAKYHMDG 111
RPEDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++
Sbjct: 79 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFSLVIFEDVRDAEDALYNLNR 138
Query: 112 YLLLGRELTVVFAEENRKKPSEMRARER 139
+ GR++ + FA+ +RK P +M+++ER
Sbjct: 139 KWVCGRQIEIQFAQGDRKTPGQMKSKER 166
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL++NL SF T PE +R F FG+++D+YLP D+YT PRGFGFV+Y
Sbjct: 6 CSLLIKNL---SFHTS-------PEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFVEYY 55
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+P A +A ++ + G+E+ ++ A+ RK P M+
Sbjct: 56 EPEYAKEAMSILNHSKIDGKEIKIIIAQNRRKSPETMK 93
>gi|429329487|gb|AFZ81246.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 212
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLL+RNLR +ST P+ ++ F +FGR++D+YLP DY T PRGFGFV+Y +
Sbjct: 8 SLLIRNLR---YSTS-------PQIVKETFERFGRIRDVYLPLDYNTRRPRGFGFVEYYE 57
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD 146
D +A MD L G +T A++ RK P+ MR R R YD
Sbjct: 58 KEDVLEAVKAMDNADLDGSVITCCLAQDRRKSPNSMRRAYRGSRRGYD 105
>gi|426235141|ref|XP_004011549.1| PREDICTED: serine/arginine-rich splicing factor 12 [Ovis aries]
Length = 301
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY-----IDPADAADAKYHMDGYLLLG 116
EDLR FG++G + D+Y+P D+YT PRGF +VQY D DA DA Y+++ + G
Sbjct: 59 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFIFEDVRDAEDALYNLNRKWVCG 118
Query: 117 RELTVVFAEENRKKPSEMRARER 139
R++ + FA+ +RK P +M+++ER
Sbjct: 119 RQIEIQFAQGDRKTPGQMKSKER 141
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 72/142 (50%), Gaps = 20/142 (14%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRNL S+ T PE +R F G +KD+YLP DY++ PRGFGFV++
Sbjct: 10 MSLLVRNL---SYQTS-------PEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFW 59
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
DA A MDG+ L G+ + V A++ R P +M+ R+ GRR R
Sbjct: 60 HREDAERALEKMDGFELDGKAIEVAIAKKGRSAPQQMKQRDER------GRREGSPRGRR 113
Query: 158 PHYARGYSRSPDYYSPPPRRGR 179
R YSR PPRRGR
Sbjct: 114 YEDERRYSR----MDSPPRRGR 131
>gi|47209886|emb|CAF94406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 98
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 12/97 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL VRN+ +S RPEDLR FG++G + D+Y+P D+YT +PRGF ++QYI
Sbjct: 10 TSLFVRNISDES----------RPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQYI 59
Query: 98 --DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
D DA DA + +D + GR++ + FA+ +RK S
Sbjct: 60 FEDVRDAEDALHSLDRKWVCGRQIEIQFAQGDRKSKS 96
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL+RNL F T P+ +R F +FGR++D+YLP D++T PRGFGFV++
Sbjct: 5 CSLLIRNL---CFETS-------PDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFY 54
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+ + A +A MD ++ G E+ V+ A++ RK P MR
Sbjct: 55 EESTAQEAMREMDRTMIDGNEVHVIIAQDRRKSPETMR 92
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 10/101 (9%)
Query: 34 RDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGF 93
R+ S+LVRNL T+K EDLR F +FG +KD+Y+P DY T EPRGF F
Sbjct: 9 REEGVSVLVRNL--------TFK--LSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAF 58
Query: 94 VQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
++ A+A +A +DG L GR + V+ A + RK+P EM
Sbjct: 59 IEMSCKAEADEAIAGLDGKDLDGRVIKVLLAAQKRKRPEEM 99
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL+RNL F T P+ +R F +FGR++D+YLP D++T PRGFGFV++
Sbjct: 5 CSLLIRNL---CFETS-------PDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFY 54
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+ + A +A MD ++ G E+ V+ A++ RK P MR
Sbjct: 55 EESTAQEAMREMDRTMIDGNEVHVIIAQDRRKSPETMR 92
>gi|156098735|ref|XP_001615383.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804257|gb|EDL45656.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1057
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL++NL SF T PE +R F FGR++D+YLP D+YT PRGFGFV+Y
Sbjct: 6 CSLLIKNL---SFHTS-------PEKIRKIFQSFGRIRDVYLPLDHYTRRPRGFGFVEYY 55
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+P A +A ++ + G+E+ ++ A+ RK P M+
Sbjct: 56 EPQYAKEALTILNHSKIDGKEIKIIIAQNRRKSPETMK 93
>gi|301106558|ref|XP_002902362.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098982|gb|EEY57034.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 373
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 32 RGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQ-FGRLKDIYLPRDYYTGEPRG 90
RGR P SLLVRNL D+ ++LR F + G + D+Y+P++Y + PRG
Sbjct: 105 RGRREPISLLVRNLSPDTTG----------DELRRAFSRRAGDILDVYIPKEYSSNRPRG 154
Query: 91 FGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
F F+++ D D K+ MD L GRE+ V+FA+++RK P EMR
Sbjct: 155 FAFIEFADARVGRDVKFEMDRTQLGGREIAVLFAKQHRKSPQEMR 199
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
RP+DLR F + G ++D+Y+P DYYT E RGF +V++ DA DA ++G +LGR
Sbjct: 25 ARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASILGRP 84
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY-SRSPH 159
+ V +AE RK +EMRAR+ SY R RY SRSPH
Sbjct: 85 IEVEWAEGQRKTKTEMRARD-----SYSSYRVRNRYRSRSPH 121
>gi|241779177|ref|XP_002399858.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508537|gb|EEC17991.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 209
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 14/101 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
+SL +RN+ RPEDLR FG++G + D+Y+P DYY PRGF +VQY
Sbjct: 11 SSLFIRNV----------PDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQYP 60
Query: 97 --IDPA-DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
+D DA DA Y +D GREL + FA+ +RK PSEM
Sbjct: 61 LFLDHLRDAEDAMYSLDRTRFYGRELEIEFAQGDRKTPSEM 101
>gi|393906774|gb|EJD74392.1| hypothetical protein, variant [Loa loa]
Length = 324
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
RP+DLR F + G ++D+Y+P DYYT E RGF +V++ DA DA ++G +LGR +
Sbjct: 6 RPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASILGRPI 65
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY-SRSPH 159
V +AE RK +EMRAR+ SY R RY SRSPH
Sbjct: 66 EVEWAEGQRKTKTEMRARD-----SYSSYRVRNRYRSRSPH 101
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 12/97 (12%)
Query: 39 SLLVRNL-RHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
S+LVRN+ H + +DLR F +FG L+D+Y+PRDYYT RGFGF+++
Sbjct: 1 SVLVRNIPLHMTV-----------DDLRKKFEKFGELRDVYIPRDYYTQRSRGFGFIEFR 49
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
D DA +A Y +D + GRE+ V ++E RK P +M
Sbjct: 50 DARDADEAIYQLDKTSIDGREINVCLSKEGRKTPRDM 86
>gi|414867727|tpg|DAA46284.1| TPA: hypothetical protein ZEAMMB73_663605 [Zea mays]
Length = 494
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 40/45 (88%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
RP+DLR PFG+FG +KDIYLP+DYYT EPRGFGF+QY DP DA+D
Sbjct: 357 RPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASD 401
>gi|351709838|gb|EHB12757.1| FUS-interacting serine-arginine-rich protein 1, partial
[Heterocephalus glaber]
Length = 262
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 3/164 (1%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R ED R FG G D+Y+P D+Y PRGF +VQ+ D DA D +++D + G +
Sbjct: 22 RSEDSRREFGSCGPTVDVYVPLDFYIRRPRGFAYVQFEDVCDAEDVLHNLDRKWICGHQT 81
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGR 179
+ FA+ +RK P++M+ +ER + S RY S + RR
Sbjct: 82 EIQFAQGDRKTPNQMKPKERRNAYSSLCYNDYDRYRCSRSRSYERRSRSRALDYICRRSY 141
Query: 180 DSRSISPRYRRYRERSYS---RSPYGSRSYSPSRSRSRSLDYSR 220
R+I+P R R RS+S R + +RS+S S+S SRS S+
Sbjct: 142 SPRNITPTGRPRRSRSHSNNDRFKHQNRSFSRSKSNSRSWSKSQ 185
>gi|221056270|ref|XP_002259273.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809344|emb|CAQ40046.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 946
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL++NL SF T P+ +R F FG+++D+YLP D+YT PRGFGFV+Y
Sbjct: 6 CSLLIKNL---SFHTS-------PDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYY 55
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+P A +A ++ + G E+ ++ A+ RK P M+
Sbjct: 56 EPQYAKEALITLNHTKIDGNEVKIIIAQNRRKSPETMK 93
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D S+L+RNL +D+ P+ +R F G++KD+YLP D+YT +PRGFGFV
Sbjct: 3 DSGCSILIRNLNYDT----------SPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFV 52
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER---FRSRSYDGRRSP 151
+Y + A +A ++ + G E+ ++ A+ RK P M+ + R D R
Sbjct: 53 EYFESKYAKEAINILNHSRIDGNEIRIIIAQNRRKSPDTMKFYHNEYLYNYRHKDNR--- 109
Query: 152 PRYSRSPHYARGYSR 166
+Y+ +Y R YS+
Sbjct: 110 -KYNNCKNYKRKYSK 123
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 10/98 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLL+RNL F T P+ +R F +FGR++D+YLP D++T PRGFGFV++
Sbjct: 5 CSLLIRNL---CFETS-------PDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFY 54
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+ A A +A MD ++ G E+ V+ A++ RK P MR
Sbjct: 55 EEAAAQEAMREMDRTMIDGNEVYVIIAQDRRKSPETMR 92
>gi|397567508|gb|EJK45626.1| hypothetical protein THAOC_35749 [Thalassiosira oceanica]
Length = 359
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 17/107 (15%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPR-------G 90
SLLVRN+ + S +DL+ F + G ++D+Y+P DY++ +P+ G
Sbjct: 154 VSLLVRNVSSEITS----------QDLQQAFSRIGEVRDVYIPMDYHSHQPKVRAFNDPG 203
Query: 91 FGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRAR 137
F F++Y PA A +A+ MD + + G L VVFA++ RK P EMR R
Sbjct: 204 FAFIEYATPAMAREAREEMDRFKIKGCNLEVVFAQQKRKTPHEMRGR 250
>gi|357462659|ref|XP_003601611.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490659|gb|AES71862.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 147
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 64/107 (59%), Gaps = 15/107 (14%)
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD-------GRRSPPRYSRSPHYA 161
MDG +LLGRE+TVVFAEENRKKP+EMR RER R D RSP P +
Sbjct: 1 MDGQVLLGREITVVFAEENRKKPTEMRVRERSSGRHSDRRRSPPRYSRSPRYSRSPPRHR 60
Query: 162 RGYSRSPDYYSPPPRRGRDSRSISPRYRRY--------RERSYSRSP 200
S DY+SPPP+R SRS+SP RR+ RERSYSRSP
Sbjct: 61 SRSRGSRDYHSPPPKRREYSRSVSPEDRRHSREGSQHSRERSYSRSP 107
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 14/105 (13%)
Query: 30 GGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPR 89
GGR SLLVRNL++++ PE LR F +FG ++D+Y+P +YYT +PR
Sbjct: 31 GGR----TMSLLVRNLKYETT----------PEILREAFEKFGPIRDVYIPLEYYTKKPR 76
Query: 90 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
GFGFV++ D DA A MDG L G ++ V A+ R P +M
Sbjct: 77 GFGFVEFHDFRDANMALREMDGGELDGNKIEVFAAKRGRSDPYQM 121
>gi|255084900|ref|XP_002504881.1| predicted protein [Micromonas sp. RCC299]
gi|226520150|gb|ACO66139.1| predicted protein [Micromonas sp. RCC299]
Length = 85
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 11/95 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLVR L D+ R E+L F ++G++ D+Y+PRDYYT P+G FVQ+ +
Sbjct: 1 SLLVRQLPPDA----------RAEELEEAFSKYGKVIDVYIPRDYYTKRPKGIAFVQFPN 50
Query: 99 PADAADAKYHMDGYLLLGRE-LTVVFAEENRKKPS 132
P +AADA+ +DG L G E ++V A + RK PS
Sbjct: 51 PEEAADAERALDGTTLCGVENISVQVALQKRKDPS 85
>gi|399216355|emb|CCF73043.1| unnamed protein product [Babesia microti strain RI]
Length = 298
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 13/106 (12%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S+LVRNL T T PE +R F +FG ++D+YLP D++T +PRGFGFV++
Sbjct: 9 SVLVRNL----LETTT------PELVRETFEKFGEIRDVYLPTDFFTHKPRGFGFVEFYK 58
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRS 144
A +A MD + G ++V A++ RK P MR RF SR+
Sbjct: 59 LESAKEAVKEMDNKTIDGATVSVTPAQDRRKSPESMR---RFSSRN 101
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 95/184 (51%), Gaps = 24/184 (13%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPHPDVDGMITLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR---- 148
FV++ D +DA DA+ MDG +L GREL V A R+ ++E RS+ GR
Sbjct: 59 FVRFHDRSDAQDAEAAMDGAVLDGRELRVQMARYGRRDLPRS-SQEEPSGRSWGGRYGRR 117
Query: 149 -----RSPPRYSRSPHYARGYSRSP---DYYSPPP-RRGRDSRSISPRYRR--YRERSYS 197
SR P Y++ SRS YSP P RR R SRS YRR YR Y
Sbjct: 118 SRSPRGRHRSQSRGPSYSKSRSRSHYGGSGYSPSPYRRSRYSRSP---YRRSHYRGSRYG 174
Query: 198 RSPY 201
RSPY
Sbjct: 175 RSPY 178
>gi|297741200|emb|CBI32151.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 73/98 (74%), Gaps = 6/98 (6%)
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARERF----RSRSYDGRRSPPRYSRSPHYARGY 164
MDG +LLGRELTVVFAEENRK+P +MRARER R R D RRSPPRYSRSP YAR
Sbjct: 1 MDGQVLLGRELTVVFAEENRKRPVDMRARERTSVVGRGRPSDRRRSPPRYSRSPRYARSR 60
Query: 165 SRSPDYYSPPPRRGRDSRSISPR-YRRYR-ERSYSRSP 200
SRSP++Y P PRR SRS+SP+ RRY E+ YS SP
Sbjct: 61 SRSPNHYPPSPRRRHYSRSVSPQDKRRYSGEQPYSASP 98
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D T+L VR + + + RPEDLR F + G ++D+Y+P DYYT E RGF +V
Sbjct: 11 DEGTTLYVRQVHYAA----------RPEDLRTLFERMGPVRDVYIPLDYYTHESRGFAYV 60
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYD 146
+Y DA A + G +LGR + + +A+ RK +EMR +E Y+
Sbjct: 61 KYEYVGDAERAYKQLHGCAILGRRIAIDWAQGERKTKAEMREKEEMAHARYE 112
>gi|325191972|emb|CCA26441.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 248
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQF-GRLKDIYLPRDYYTGEPRGFGFVQ 95
P SLLVRNL + KT +DLR F + G ++D+Y+P+D+ T E R F FV+
Sbjct: 142 PQSLLVRNL-----NPKTT-----GDDLRRAFSRRPGDIRDVYIPKDHSTNELRTFAFVE 191
Query: 96 YIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
+ D +A + KY MD L G E+ V+FA++ RK P +MR
Sbjct: 192 FRDAREAREVKYEMDRTTLDGNEIAVLFAQQRRKTPDQMR 231
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
N H S + ++ + +++ F ++G + D+++PRDYYT + RGF F+++ + A
Sbjct: 98 NPNHCSLIVRGFRDVVDRSEIQNIFSKYGNVHDVHIPRDYYTHKQRGFAFIEFENREQAE 157
Query: 104 DAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
DA H+DG + G ++V A+ NRK +EM
Sbjct: 158 DAISHLDGRSVCGSTVSVSIAKNNRKTSAEM 188
>gi|405969990|gb|EKC34930.1| 35 kDa SR repressor protein [Crassostrea gigas]
Length = 208
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 31/134 (23%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
+SL VRN+ T ++ E+LR FG++G L D+Y+P DYYT +PRGF +VQY
Sbjct: 10 SSLYVRNV------PSTERAEEMAEELRALFGKYGPLTDVYVPVDYYTRDPRGFAYVQYP 63
Query: 97 -----------------IDPA-DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
ID + DA DA YH+D G EL V FA +RK P++MR+++
Sbjct: 64 LFRLTKSVLLLSSLVHVIDYSRDADDALYHLDRTRFYGMELEVEFARGDRKTPNQMRSKD 123
Query: 139 RFRSRSYDGRRSPP 152
R GRRS P
Sbjct: 124 R------GGRRSSP 131
>gi|118481107|gb|ABK92507.1| unknown [Populus trichocarpa]
Length = 149
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 57/98 (58%), Gaps = 21/98 (21%)
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDG---------------RRSPPR 153
MDG + LGRELTVVFAEENRKKP +MRARER +R G RSPP
Sbjct: 1 MDGRVFLGRELTVVFAEENRKKPVDMRARERTATRGRVGDRRRSPPRYSRSPRHSRSPP- 59
Query: 154 YSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRY 191
P A S S DYYSPP RR SRS+SPR RRY
Sbjct: 60 ----PRNATSRSHSRDYYSPPKRR-HPSRSVSPRERRY 92
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D TSL V NL TY++ PEDL+ F ++G + D+Y+PR YT E RGF FV
Sbjct: 11 DGMTSLKVDNL--------TYRTT--PEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D D DA +DGY+L GREL V A
Sbjct: 61 RFYDKRDCEDAMDSLDGYILDGRELRVQMA 90
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
L+ D+ + +T P+ LR F ++GR+ D+Y+PR+++T PRGF FV++ D DA
Sbjct: 15 TLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDRRDAQ 69
Query: 104 DAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
DA+ MDG L GREL V A R+ P R RE
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRRDPPRSRQRE 104
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + +L+ D+ + +T PE LR F ++GR+ D+Y+PRD YT E RGF
Sbjct: 4 GRPPPDVEGMVSLKVDNLTYRTA-----PETLRRVFEKYGRVGDVYIPRDRYTKESRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRS 150
FV++ D DA DA MDG LL GREL V A R S R + + GRRS
Sbjct: 59 FVRFFDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGGGRRGPPKKHSGRRS 116
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV+++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFL 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DKRDAEDAMDAMDGALLDGRELRVQMA 90
>gi|413955619|gb|AFW88268.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
Length = 117
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 68/113 (60%), Gaps = 13/113 (11%)
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRSYDGRRSPPRYSRSPHY----AR 162
MDG +LLGRE+ VVFAEENRKKPS+MRARE+ R RSYDGR SRSP
Sbjct: 1 MDGKMLLGREIAVVFAEENRKKPSDMRAREKISGRGRSYDGR----LRSRSPGLNGSPRG 56
Query: 163 GYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSPYGSRSYSPSRSRSRS 215
YSP P+R SRS +P R RERS SRSP +RS S S SRS
Sbjct: 57 RSRSQSRSYSPAPKRKHYSRSPAP---RPRERSLSRSPAVNRSRSASPIVSRS 106
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV+++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFL 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DKRDAEDAMDAMDGALLDGRELRVQMA 90
>gi|294933968|ref|XP_002780925.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
gi|239891072|gb|EER12720.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
Length = 137
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR F ++G ++D+Y+P DYY+ PRGFGFV++ DP DA +AK MDG + G + V
Sbjct: 3 LREAFEKYGEIRDVYIPLDYYSRRPRGFGFVEFSDPRDADEAKAAMDGKRIGGNAIEVEI 62
Query: 124 AEENRKKPSEMR 135
A+E RK P MR
Sbjct: 63 AKERRKSPKTMR 74
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV+++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFL 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DKRDAEDAMDAMDGALLDGRELRVQMA 90
>gi|428172429|gb|EKX41338.1| hypothetical protein GUITHDRAFT_142043 [Guillardia theta CCMP2712]
Length = 137
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 55/77 (71%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E+++ F +FG+++D+Y+P DY+T P+ F F+++++ DA DAK +D + GR+++V
Sbjct: 20 EEVKSVFERFGKVRDVYIPTDYHTKRPKPFAFIEFLNGDDARDAKDELDNREICGRKVSV 79
Query: 122 VFAEENRKKPSEMRARE 138
++A+ R P +MRAR+
Sbjct: 80 LYAQRGRTTPDQMRARD 96
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV
Sbjct: 11 DGMTSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 61 RFHDKRDAEDAMDAMDGAILDGRELRVQMA 90
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+P ++ T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 148
FV++ D +DA DA+ MDG +L GREL V A R+ S ++E R RS+ GR
Sbjct: 59 FVRFHDWSDAQDAEAAMDGAVLDGRELRVQVARYGRRDLSGS-SQEEPRGRSWGGR 113
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F ++G L D+Y+PRD TGEPRGF FV+++D DA DA MDG GREL +
Sbjct: 41 DDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRMDGEFFAGRELRI 100
Query: 122 VFAEENR 128
+A++ R
Sbjct: 101 QYAKKRR 107
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV
Sbjct: 11 DGMTSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 61 RFHDKRDAEDAMDAMDGAILDGRELRVQMA 90
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DKRDAEDAMDAMDGALLDGRELRVQMA 90
>gi|348680240|gb|EGZ20056.1| hypothetical protein PHYSODRAFT_354260 [Phytophthora sojae]
Length = 251
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
P SLLVRNL ++ + ++ R + G + D+Y+P++Y + PRGF F+++
Sbjct: 80 PISLLVRNLSPETTQDELRRAFSR---------RAGDILDVYIPKEYNSNRPRGFAFIEF 130
Query: 97 IDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
D D K+ MD L RE+ V+FA+++RK P EMR
Sbjct: 131 ADSRVGRDIKFEMDRTQLGDREIAVLFAKQHRKSPQEMR 169
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 10/95 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLVRNL +D+ E++R F ++G ++D+Y+P+DY+T P+GF FV++
Sbjct: 1 VSLLVRNLPYDA----------TVEEIRTAFEEYGEVRDVYIPKDYHTKRPKGFAFVEFP 50
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
DP +A A+ +D L G E++V A++ RK PS
Sbjct: 51 DPREAELAEDKLDKTRLCGVEVSVQVAKQKRKDPS 85
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 96/189 (50%), Gaps = 24/189 (12%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T + LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRTSH-----DSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR---- 148
FV++ +DA DA+ MD +L GREL V A R+ ++E R RS+ GR
Sbjct: 59 FVRFHHRSDAQDAEAAMDRAMLDGRELRVQMALYGRRDLPRS-SQEEPRGRSWGGRYGRR 117
Query: 149 -----RSPPRYSRSPHYARGYSRSP---DYYSPPPRRGRDSRSISPRYRR--YRERSYSR 198
SR P Y+ SRS +YSP P R R RS YRR YR Y R
Sbjct: 118 SRSPRGRHRSQSRGPSYSGSRSRSHYGGSHYSPSPCRSRYCRSP---YRRSHYRGSRYGR 174
Query: 199 SPYGSRSYS 207
SPY SRSYS
Sbjct: 175 SPY-SRSYS 182
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 20 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 69
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 70 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|221488339|gb|EEE26553.1| serine/arginine rich splicing factor, putative [Toxoplasma gondii
GT1]
gi|221508841|gb|EEE34410.1| RRM domain-containing protein [Toxoplasma gondii VEG]
Length = 170
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+++R F +FG ++D+YLP DY+TGEPRGFGFV++ DA DA + + LL G + V
Sbjct: 6 QEVRAAFEEFGPIRDVYLPLDYHTGEPRGFGFVEFESSKDAYDAMHQLHNTLLNGSTIHV 65
Query: 122 VFAEENRKKPSEM 134
A++ R P +M
Sbjct: 66 TIAKKGRSDPMQM 78
>gi|428179023|gb|EKX47896.1| hypothetical protein GUITHDRAFT_106442 [Guillardia theta CCMP2712]
Length = 563
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%)
Query: 48 DSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY 107
D++ K Y R ++L F +FGR+ D+Y+PR YY G PRGF FV++ + D A
Sbjct: 311 DAYWWKRYLLDRRVDELEQVFNRFGRILDVYIPRSYYKGIPRGFAFVEFENYLDCKAALR 370
Query: 108 HMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
DG L GR L++ +A+ NRK EMR R R
Sbjct: 371 SYDGTRLDGRVLSICYAQMNRKSSGEMRRRNR 402
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Oreochromis
niloticus]
Length = 218
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV
Sbjct: 11 DGMTSLKVDNL--------TYRT--SPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG LL GREL V A
Sbjct: 61 RFHDKRDAEDAMDAMDGALLDGRELRVQMA 90
>gi|237833159|ref|XP_002365877.1| hypothetical protein TGME49_072440 [Toxoplasma gondii ME49]
gi|211963541|gb|EEA98736.1| hypothetical protein TGME49_072440 [Toxoplasma gondii ME49]
Length = 170
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+++R F +FG ++D+YLP DY+TGEPRGFGFV++ DA DA + + LL G + V
Sbjct: 6 QEVRAAFEEFGPIRDVYLPLDYHTGEPRGFGFVEFESSKDAYDAMHQLHNTLLNGSTIHV 65
Query: 122 VFAEENRKKPSEM 134
A++ R P +M
Sbjct: 66 TIAKKGRSDPMQM 78
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 22 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 71
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 72 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 101
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
L V NL +D+ + D+ FG+FG++KD++LP TG RGFGFV + D
Sbjct: 82 LFVGNLNYDT----------KVSDMEEAFGKFGKVKDVFLPMHRVTGTCRGFGFVTFADR 131
Query: 100 ADAADAKYHMDGYLLLGRELTVVFA 124
+A DA+ M+G LGRE+ V FA
Sbjct: 132 TEAEDAEKGMNGTTFLGREVAVNFA 156
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 12 PPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQF 71
PPR G S + R RD + + TY++ PEDLR F +
Sbjct: 16 PPRIDG----MVSLKASICKRKRDQIAHKMAAGWQRCVVDNLTYRTT--PEDLRRVFERC 69
Query: 72 GRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
G + DIY+PRD YT E RGF FV++ D DA DA MDG +L GREL V A
Sbjct: 70 GEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMA 122
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D TSL V NL TY++ PEDL+ F ++G + D+Y+PR YT E RGF FV
Sbjct: 11 DGMTSLKVDNL--------TYRTT--PEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D D DA +DGY++ GREL V A
Sbjct: 61 RFYDKRDCEDAMDALDGYMMDGRELRVQMA 90
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 20 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 69
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 70 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>gi|307106096|gb|EFN54343.1| hypothetical protein CHLNCDRAFT_135593 [Chlorella variabilis]
Length = 224
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 12/93 (12%)
Query: 34 RDLPT--SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 91
RD PT SLLVRNL D +DLR ++GR+KD+Y+P+DYYTG PRG
Sbjct: 5 RDPPTGCSLLVRNLAPDVSG----------DDLRYAAEKYGRVKDVYVPKDYYTGRPRGI 54
Query: 92 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
FV++ D DA DAKY MD +L E+ V FA
Sbjct: 55 AFVEFDDRRDAEDAKYGMDRSMLGSGEIAVQFA 87
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 20 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 69
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 70 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>gi|443726785|gb|ELU13844.1| hypothetical protein CAPTEDRAFT_222122 [Capitella teleta]
Length = 99
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL VRNL S R E+LR FG++G + D+YLP D+YT PRGF ++QY
Sbjct: 10 TSLYVRNLPDTS----------RSEELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQYP 59
Query: 97 -----IDPADAADAKYHMDGYLLLGRELTVVFAEENRK 129
DP DA DA YH+D G +L + FA +RK
Sbjct: 60 SVSKFKDPRDAEDALYHLDRTRFFGCDLEIEFARGDRK 97
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 92/184 (50%), Gaps = 24/184 (13%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PR F
Sbjct: 4 GRPHPDVDGMITLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR---- 148
FV++ D +DA DA+ MDG +L GREL V A R+ ++E RS+ GR
Sbjct: 59 FVRFHDRSDAQDAEAAMDGAVLDGRELRVQMARYGRRDLPRS-SQEEPSGRSWGGRYGRR 117
Query: 149 -----RSPPRYSRSPHYARGYSRS----PDYYSPPPRRGRDSRSISPRYRR--YRERSYS 197
SR P Y++ SRS Y P RR R SRS YRR YR Y
Sbjct: 118 SRSPRGRHRSQSRGPSYSKSRSRSHYGGSGYSRSPYRRSRYSRSP---YRRSHYRGSRYG 174
Query: 198 RSPY 201
RSPY
Sbjct: 175 RSPY 178
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 20 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 69
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 70 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SLLV+NL++++ P+ +R F ++G ++D+YLP DYYT +PRGFGFV++
Sbjct: 13 ISLLVKNLKYET----------SPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFY 62
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
DA +A MDG + G ++ V A+ R P EM
Sbjct: 63 KEEDADEALRGMDGEEIDGNKVEVFPAKHGRSDPREM 99
>gi|83286039|ref|XP_729987.1| dentin phosphoryn [Plasmodium yoelii yoelii 17XNL]
gi|23489341|gb|EAA21552.1| dentin phosphoryn [Plasmodium yoelii yoelii]
Length = 793
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 18/128 (14%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLL+RNL SF T P+ +R F FG+++D+YLP D+YT PRGFGFV+Y D
Sbjct: 7 SLLIRNL---SFETS-------PDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYD 56
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA------RERFRSRSYDG--RRS 150
P A +A ++ + G+E+ ++ A+ RK P M+ ++RS Y+ R
Sbjct: 57 PKHAKEALNILNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNDSKYRSYKYENNIREK 116
Query: 151 PPRYSRSP 158
R SR P
Sbjct: 117 RRRISRYP 124
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 21 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 70
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 71 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 100
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DNRDAEDAMDAMDGALLDGRELRVQMA 90
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD Y+ E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFF 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DKRDAEDAMDAMDGALLDGRELRVQMA 90
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|297282509|ref|XP_001113147.2| PREDICTED: splicing factor, arginine/serine-rich 13A-like [Macaca
mulatta]
Length = 98
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++ +
Sbjct: 10 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 69
Query: 122 VFAEENRKKPSEMRARERFRSRSYDGRR 149
FA+ +RK ++ S Y R+
Sbjct: 70 QFAQGDRKSKPNCSWNTQYSSAYYTSRK 97
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D TSL V NL TY++ PEDL+ F ++G + D+Y+PR YT E RGF FV
Sbjct: 11 DGMTSLKVDNL--------TYRTT--PEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFV 60
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D D DA +DGY++ GREL V A
Sbjct: 61 RFYDKRDCEDAMDALDGYMMDGRELRVQMA 90
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ PE LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 17 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 66
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 67 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 96
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 20 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 69
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 70 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>gi|388494870|gb|AFK35501.1| unknown [Medicago truncatula]
Length = 93
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
Query: 1 MRGRSYSYSPS-----PPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTY 55
MRGRSYSYSPS R R + GGR RDLPTSLLVRNL D
Sbjct: 1 MRGRSYSYSPSPPRRYGGRRRSPSPRGRYGGRYRGGRDRDLPTSLLVRNLAKD------- 53
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTG 86
CRPEDL PFGQFG +KD+YLPRDYYTG
Sbjct: 54 ---CRPEDLHDPFGQFGPVKDVYLPRDYYTG 81
>gi|307106243|gb|EFN54489.1| hypothetical protein CHLNCDRAFT_17896, partial [Chlorella
variabilis]
Length = 63
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 48/62 (77%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R E++RG F ++G ++D+YLP+DYY+G P+GFGF++++D DA +A Y++D + GRE+
Sbjct: 1 RAEEVRGKFERYGPIRDVYLPKDYYSGRPKGFGFIEFLDIRDAEEAIYNLDRTMFGGREI 60
Query: 120 TV 121
V
Sbjct: 61 QV 62
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ P+DLR F + G + DIY+PRD YT E RGF FV
Sbjct: 20 DGMVSLKVDNL--------TYRTT--PDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 69
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 70 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%)
Query: 49 SFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 108
+ C PE+LR F G+L D+Y+PRD TGEPRGF FV+Y+D DA A
Sbjct: 3 TLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDR 62
Query: 109 MDGYLLLGRELTVVFAEENR 128
+DG GREL + +A + R
Sbjct: 63 LDGTRFNGRELRIQYARKRR 82
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ PEDLR F + G + DIY+PRD +T E RGF FV++
Sbjct: 14 VSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DKRDAEDALDAMDGRLLDGRELRVQMA 90
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ PEDLR F + G + DIY+PRD +T E RGF FV++
Sbjct: 14 VSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DKRDAEDALDAMDGRLLDGRELRVQMA 90
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 21 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 70
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 71 RFYDKRDAEDALEAMDGRMLDGRELRVQMA 100
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ PEDLR F + G + DIY+PRD +T E RGF FV++
Sbjct: 14 VSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG LL GREL V A
Sbjct: 64 DKRDAEDALDAMDGRLLDGRELRVQMA 90
>gi|345320496|ref|XP_001519931.2| PREDICTED: hypothetical protein LOC100090925, partial
[Ornithorhynchus anatinus]
Length = 369
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R EDLR FG++G + D+Y+P D+YT PRGF +VQ+ D DA DA +++D + GR++
Sbjct: 101 RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQI 160
Query: 120 TVVFAEENRKK 130
+ FA+ +RK
Sbjct: 161 EIQFAQGDRKN 171
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 80 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 129
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 130 DKRDAEDAMDAMDGAVLDGRELRVQMA 156
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
S+LVRN+ D+ +D+R F +G + D+Y+P+D TG RG FV+Y
Sbjct: 1 VSVLVRNISFDA----------HEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYA 50
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRAR 137
+A DA G ++GRE+ A E RK P EMR R
Sbjct: 51 IQGEADDAVEKATGMDIMGREVRCEIANERRKNPDEMRGR 90
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ PEDLR F + G + DIY+PRD +T E RGF FV++
Sbjct: 14 VSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDALDAMDGRMLDGRELRVQMA 90
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
L V NL TY++ PEDL+ F ++G + D+Y+PR YT E RGF FV++ D
Sbjct: 1 LKVDNL--------TYRTT--PEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDK 50
Query: 100 ADAADAKYHMDGYLLLGRELTVVFA 124
D DA +DGY++ GREL V A
Sbjct: 51 RDCEDAMDALDGYMMDGRELRVQMA 75
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 2 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 51
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 52 DKRDAEDAMDAMDGAVLDGRELRVQMA 78
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 16/106 (15%)
Query: 34 RDLP-TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
RDLP S+LVRNL D+ R +D+R F +G + D+Y+P+D TG PRG
Sbjct: 39 RDLPGVSVLVRNLSWDA----------REDDVRDRFAGYGNILDVYMPKDRETGRPRGLA 88
Query: 93 FVQYIDPADAADAKYHMDGYL--LLGRELTVVFAEENRKKPSEMRA 136
FV+Y A ++A +DG + LGRE+ A + RK EMR+
Sbjct: 89 FVKY---ATQSEADAAVDGGVGDFLGREIRCEIATQQRKSRDEMRS 131
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ EDLR FG FGR+ ++ +P+D TG RG+GFV Y ADA +A HM+ + LLG++
Sbjct: 343 IQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELLGQQ 402
Query: 119 LTVVFA 124
L V +A
Sbjct: 403 LRVGYA 408
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
+L+ D+ + +T PE LR F ++GR+ D+Y+PRD Y+ E RGF FV++ D DA
Sbjct: 1 SLKVDNLTYRT-----SPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAE 55
Query: 104 DAKYHMDGYLLLGRELTVVFA 124
DA MDG LL GREL V A
Sbjct: 56 DAMDAMDGALLDGRELRVQMA 76
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 71 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 120
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 121 DKRDAEDAMDAMDGAVLDGRELRVQMA 147
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 48 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 97
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 98 DKRDAEDAMDAMDGAVLDGRELRVQMA 124
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
FV++ D DA DA+ MDG L GREL V A R+ R RE
Sbjct: 59 FVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYGRRDLPRSRQRE 104
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
FV++ D DA DA+ MDG L GREL V A R+ R RE
Sbjct: 59 FVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYGRRDLPRSRQRE 104
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
Query: 26 RGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYT 85
RG Y R ++PT L VR + + + RP+DLR F Q G ++D+Y+P DYYT
Sbjct: 5 RGSY--RDDEIPT-LYVRQVHYSA----------RPDDLRALFEQMGPVRDVYIPLDYYT 51
Query: 86 GEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
E RGF +V++ DA DA ++G +LGR + V +AE RK +
Sbjct: 52 RESRGFAYVKFEFTRDAEDALRELNGTSILGRRIEVEWAEGQRKSTA 98
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ EDLR FG FGR+ ++ +P+D TG RG+GFV Y ADA +A HM+ + LLG++
Sbjct: 338 IQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELLGQQ 397
Query: 119 LTVVFA 124
L V +A
Sbjct: 398 LRVGYA 403
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ EDLR FG FGR+ ++ +P+D TG RG+GFV Y ADA +A HM+ + LLG++
Sbjct: 338 IQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAMQHMNNFELLGQQ 397
Query: 119 LTVVFA 124
L V +A
Sbjct: 398 LRVGYA 403
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+P + +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 148
FV++ D +DA DA+ MDG +L REL V A R+ ++E R RS+ GR
Sbjct: 59 FVRFHDRSDAQDAEAAMDGAVLDERELRVRMARYGRRDLPRS-SQEEPRGRSWGGR 113
>gi|313225812|emb|CBY07286.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
RP++L+ F +FG +KD+++P D+ T PRGF ++++ DA + MDG L GR+
Sbjct: 15 VRPDELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEFETMEDARNG-LGMDGMNLNGRK 73
Query: 119 LTVVFAEENRKKPSEMRA 136
+ V FAE +RK P M++
Sbjct: 74 VNVAFAEGDRKTPGAMKS 91
>gi|313219579|emb|CBY30501.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
RP++L+ F +FG +KD+++P D+ T PRGF ++++ DA + MDG L GR+
Sbjct: 15 VRPDELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEFETMEDARNG-LGMDGMNLNGRK 73
Query: 119 LTVVFAEENRKKPSEMRA 136
+ V FAE +RK P M++
Sbjct: 74 VNVAFAEGDRKTPGAMKS 91
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 14 DGMISLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 63
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG L GREL V A
Sbjct: 64 RFYDKRDAEDALEAMDGRKLDGRELRVQMA 93
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla gorilla
gorilla]
Length = 282
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T P GF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRT-----SPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
FV++ D +DA DA+ MDG +L GREL V A
Sbjct: 59 FVRFHDRSDAQDAEAAMDGAVLDGRELRVQMA 90
>gi|313229099|emb|CBY18251.1| unnamed protein product [Oikopleura dioica]
Length = 385
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 19/113 (16%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
++R F FG L+D+YLP+DYYT E +G +V+Y + DA +A+ MDG G+ ++V
Sbjct: 139 EVRDYFQVFGELRDVYLPKDYYTKEMKGVAYVEYKEQEDAEEAQAAMDGCEFNGKNISVT 198
Query: 123 FAEENRKKPS------------------EMRARERFRSRSYDGRR-SPPRYSR 156
FA+ +RK E+ ++ SR+ G R SPPR++
Sbjct: 199 FAQGDRKSKDTMATGVYATNMEIEMLKKELALEQKRLSRAAQGERISPPRFAE 251
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ P+DLR F + G + DIY+PRD +T E RGF FV
Sbjct: 12 DGMISLKVDNL--------TYRTT--PDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFV 61
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 62 RFYDKRDAEDALDAMDGRMLDGRELRVQMA 91
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ C EDLR F ++G + D+Y+P+D ++ E RGF FV++
Sbjct: 13 TSLKVDNL--------TYRTTC--EDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFY 62
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D D DA + MDG ++ GREL V A
Sbjct: 63 DRRDGEDAMHAMDGRMMDGRELRVQLA 89
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR PT + +L+ D+ + +T PEDL+ F ++G + D+Y+PR YT + RGF
Sbjct: 4 GRGPPTIDGMTSLKVDNLTYRTT-----PEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
FV++ D D DA +DGY+L GREL V A
Sbjct: 59 FVRFYDKRDGEDAMDALDGYILDGRELRVQMA 90
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ P+DLR F + G + DIY+PRD +T E RGF FV
Sbjct: 19 DGMISLKVDNL--------TYRTT--PDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFV 68
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 69 RFYDKRDAEDALDAMDGRMLDGRELRVQMA 98
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ P+DLR F + G + DIY+PRD +T E RGF FV++
Sbjct: 14 VSLKVDNL--------TYRTT--PDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDALDAMDGRMLDGRELRVQMA 90
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ PEDLR F + G + DIY+PRD +T E RGF FV++
Sbjct: 15 ISLKVDNL--------TYRTT--PEDLRRVFERCGSVGDIYIPRDRHTRESRGFAFVRFY 64
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
+ DA +A MDG +L GREL V A
Sbjct: 65 EKRDAEEALQEMDGRVLDGRELRVQMA 91
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L REL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDARELRVQMA 90
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGREL 119
D DA DA MDG +L GREL
Sbjct: 64 DKRDAEDAMDAMDGAVLDGREL 85
>gi|260826177|ref|XP_002608042.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
gi|229293392|gb|EEN64052.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
Length = 111
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 16/98 (16%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY- 96
TSL VRN+ + RP++LR FG++G + D+Y+P D++T PRGF +VQY
Sbjct: 10 TSLYVRNVPDGT----------RPDELRSLFGKYGPIVDVYIPLDHFTRHPRGFAYVQYP 59
Query: 97 -----IDPADAADAKYHMDGYLLLGRELTVVFAEENRK 129
D DA DA Y +D GREL + FAE +RK
Sbjct: 60 FLLTFEDVRDAEDAMYGLDRSRFYGRELEIQFAEGDRK 97
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ P+DLR F + G + DIY+PRD +T E RGF FV++
Sbjct: 15 VSLKVDNL--------TYRTT--PDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFY 64
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 65 DKRDAQDALDAMDGRMLDGRELRVQMA 91
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
P++++ F ++G + DIY+PRD YT E RGF FV++ + DA DA +DGY++ GRE+
Sbjct: 15 PDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAMERLDGYVIDGREMR 74
Query: 121 VVFAEENRKKPSEMRAR 137
V A R P+E + R
Sbjct: 75 VQLARYGR--PNENKGR 89
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
FV++ D DA DA+ MDG L GREL V A
Sbjct: 59 FVRFHDRRDAQDAEAAMDGAELDGRELRVQVA 90
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
FV++ D DA DA+ MDG L GREL V A
Sbjct: 59 FVRFHDRRDAQDAEAAMDGAELDGRELRVQVA 90
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
FV++ D DA DA+ MDG L GREL V A
Sbjct: 59 FVRFHDRRDAQDAEAAMDGAELDGRELRVQVA 90
>gi|414866978|tpg|DAA45535.1| TPA: hypothetical protein ZEAMMB73_960766 [Zea mays]
Length = 202
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRS 142
RGFGFV+Y+D DA++AK++MDG ++LGR+L VV+A++ RK PS MR R RS
Sbjct: 7 RGFGFVEYVDLEDASNAKHYMDGQIVLGRKLRVVYAQDVRKSPSAMRLRAIERS 60
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like [Callithrix
jacchus]
Length = 295
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
FV++ D DA DA+ MDG L GREL V A
Sbjct: 59 FVRFHDQRDAEDAEAAMDGAELDGRELRVQVA 90
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 13/97 (13%)
Query: 31 GRGRDLP---TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGE 87
GRG TSL V NL TY++ PEDLR F ++G + D+Y+PRD +T E
Sbjct: 4 GRGPPEIDGMTSLKVDNL--------TYRTT--PEDLRRAFDKYGDVGDVYIPRDRFTRE 53
Query: 88 PRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
RGF FV++ D DA DA MDG ++ GREL V A
Sbjct: 54 SRGFAFVRFYDKRDAEDALDSMDGAIMDGRELRVQMA 90
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL ++ST PEDLR F ++G + DIY+PRD ++ E RGF FV+Y
Sbjct: 14 TSLKVDNL---TYSTT-------PEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYP 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG L GR+L V A
Sbjct: 64 DKRDAEDAMDSMDGNLYDGRKLRVQMA 90
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGREL 119
D DA DA MDG +L GREL
Sbjct: 64 DKRDAEDAMDAMDGAVLDGREL 85
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
FV++ D DA DA+ MDG L GREL V A
Sbjct: 59 FVRFHDRRDAQDAEAAMDGAELDGRELRVQVA 90
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL ++ST PEDLR F ++G + DIY+PRD ++ E RGF FV+Y
Sbjct: 14 TSLKVDNL---TYSTT-------PEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYP 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG L GR+L V A
Sbjct: 64 DKRDAEDAMDSMDGNLYDGRKLRVQMA 90
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 5 TLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 59
Query: 104 DAKYHMDGYLLLGRELTVVFA 124
DA+ MDG L GREL V A
Sbjct: 60 DAEAAMDGAELDGRELRVQVA 80
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ P+DLR F + G + DIY+PRD +T E RGF FV
Sbjct: 12 DGMISLKVDNL--------TYRTT--PDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFV 61
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 62 RFYDKRDAQDALDAMDGRMLDGRELRVQMA 91
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 13/90 (14%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPF---GQFGRLKDIYLPRDYYTGEPRGFGFV 94
TSL V NL TY++ P+ LR F G++GR+ D+Y+PRD YT E RGF FV
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFAFV 63
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG +L GREL V A
Sbjct: 64 RFHDKRDAEDAMDAMDGAVLDGRELRVQMA 93
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 150 GRPPPDVDGMITLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 204
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTV 121
FV++ D DA DA+ MDG L GREL V
Sbjct: 205 FVRFHDRRDAQDAEAAMDGAELDGRELRV 233
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD +T E RGF FV
Sbjct: 11 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFV 60
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ D DA DA MDG ++ GREL V A
Sbjct: 61 RFYDKRDAEDALDAMDGRMVDGRELRVQMA 90
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++ R+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%)
Query: 49 SFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 108
S R EDLR F +FG + DIY+PR T +PRG+ FV++I+ DA DA H
Sbjct: 14 SVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFINERDAEDAIKH 73
Query: 109 MDGYLLLGRELTVVFAE 125
MDG L G+E+ A+
Sbjct: 74 MDGQQLNGKEVYCQLAK 90
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ EDL F ++G L DIY+PRD T E RGF FV+Y
Sbjct: 18 VSLKVDNL--------TYRTSM--EDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRYY 67
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
+ DA DA MDG ++ GRE+ V A
Sbjct: 68 EERDAEDAMDSMDGKVIDGREIRVAMA 94
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+P + +T PRGF
Sbjct: 260 GRPPPDVDGMITLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFA 314
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 148
FV++ D +DA DA+ MDG +L REL V A R+ ++E R RS+ GR
Sbjct: 315 FVRFHDRSDAQDAEAAMDGAVLDERELRVRMARYGRRDLPR-SSQEEPRGRSWGGR 369
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
+L+ D+ + +T PEDLR F + G + DIY+PRD +T E RGF FV++ D DA
Sbjct: 15 SLKVDNLTYRT-----TPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAE 69
Query: 104 DAKYHMDGYLLLGRELTVVFA 124
DA MDG LL GREL V A
Sbjct: 70 DALDAMDGRLLDGRELRVQMA 90
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 42 VRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPAD 101
+ +L+ D+ + +T PEDLR F ++G + D+Y+PRD +T E RGF FV+Y D D
Sbjct: 13 MHSLKVDNLTYRT-----TPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDKRD 67
Query: 102 AADAKYHMDGYLLLGRELTVVFA 124
A DA MDG L GREL V A
Sbjct: 68 AEDALDAMDGATLDGRELRVQMA 90
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 10/84 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ EDLR F ++G + D+Y+PRD ++ E RGF FV++
Sbjct: 14 ASLKVDNL--------TYRTTT--EDLRRAFEKYGDVGDVYIPRDRFSHESRGFAFVRFF 63
Query: 98 DPADAADAKYHMDGYLLLGRELTV 121
D DA DA MDG ++ GREL V
Sbjct: 64 DKRDADDAMESMDGAVMDGRELRV 87
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris gallopavo]
Length = 239
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 10/91 (10%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENR 128
D DA DA MDG +L GR +E+ R
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRXXXATRSEQWR 94
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV++
Sbjct: 14 VSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA +A +DG +L GREL V A
Sbjct: 64 DRRDAEEALDSLDGRMLDGRELRVQMA 90
>gi|313235509|emb|CBY10964.1| unnamed protein product [Oikopleura dioica]
Length = 360
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%)
Query: 47 HDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAK 106
+ S + + RP++++ F +FG +K+I +P D+ T EPRGF +V + + A +A+
Sbjct: 10 NSSICIRPIDACIRPDEIKAEFKEFGEIKEIRIPVDFETREPRGFAYVDFEEVESAIEAR 69
Query: 107 YHMDGYLLLGRELTVVFAEENRKKPSEM 134
++G +L R++ V ++ +K PSEM
Sbjct: 70 DIINGRILFDRKVQVYYSNGTKKLPSEM 97
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+P + +T PRGF
Sbjct: 4 GRPPPDVDGMITLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFA 58
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGR 148
FV++ D +DA DA+ MDG +L REL V A R+ ++E R RS+ GR
Sbjct: 59 FVRFHDRSDAQDAEAAMDGAVLDERELRVRMARYGRRDLPR-SSQEEPRGRSWGGR 113
>gi|428177144|gb|EKX46025.1| hypothetical protein GUITHDRAFT_70912, partial [Guillardia theta
CCMP2712]
Length = 84
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR FG++G +KD+Y+P DYYT P+ F FV++I+ +A DAK MD GR + V
Sbjct: 11 QDLRELFGRYGTVKDVYIPIDYYTKRPKPFAFVEFINYEEARDAKEDMDRREFQGRVIDV 70
Query: 122 VFAEE 126
VFA++
Sbjct: 71 VFAQQ 75
>gi|313216842|emb|CBY38074.1| unnamed protein product [Oikopleura dioica]
Length = 360
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 8/86 (9%)
Query: 57 SIC--------RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 108
SIC RP++++ F +FG +K+I +P D+ T EPRGF +V + + A +A+
Sbjct: 12 SICIHPIDACIRPDEIKAEFKEFGEIKEIRIPVDFETREPRGFAYVDFEEVESAIEARDI 71
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEM 134
++G +L R++ V ++ +K PSEM
Sbjct: 72 INGRILFDRKVQVYYSNGTKKLPSEM 97
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++ + D+Y+PR+ +T PRGF
Sbjct: 198 GRPPPDVDGMITLKVDNLTYRT-----SPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFA 252
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 129
FV++ D +DA DA+ MDG +L GREL V A R+
Sbjct: 253 FVRFHDRSDAQDAEAAMDGAVLDGRELRVRMARYGRR 289
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ EDL+ F ++G L DIY+PRD T E RGF FV++
Sbjct: 16 TSLKVDNL--------TYRTTV--EDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFY 65
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
+ DA DA MD +LL GRE+ V A
Sbjct: 66 EKRDAEDAMDCMDRHLLDGREVRVQMA 92
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR ++GR+ D Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ EDLR F + G + DIY+PRD YT E RGF FV++
Sbjct: 2 VSLKVDNL--------TYRTTA--EDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFF 51
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA +DG +L GREL V A
Sbjct: 52 DRRDAEDALDSLDGRMLDGRELRVQMA 78
>gi|241627928|ref|XP_002408123.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215501127|gb|EEC10621.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 105
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 70 QFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRK 129
++G + D+Y+P DYY PRGF +VQ+ D DA DA Y +D GREL + FA+ +RK
Sbjct: 1 KYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAMYSLDWTRFYGRELEIEFAQGDRK 60
Query: 130 KPSEMRAR 137
P R+R
Sbjct: 61 TPRRSRSR 68
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL F ++G++ DIY+P+ Y+ G PRGF +V++ DA A + ++LG+ L V
Sbjct: 19 DLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEKIPSIVILGQTLNVE 78
Query: 123 FAEENRKKPSEMR 135
+A RK ++MR
Sbjct: 79 WATGERKTSNDMR 91
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV++
Sbjct: 14 VSLKVDNL--------TYRTT--PEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA +A +DG +L GREL V A
Sbjct: 64 DRRDAEEALDSLDGRMLDGRELRVQMA 90
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE--ENRKKPSEMRARE 138
+A A +DG ++ GRE+TV FA+ N +K S+ R E
Sbjct: 67 KDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVE 108
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE--ENRKKPSEMRARE 138
+A A +DG ++ GRE+TV FA+ N +K S+ R E
Sbjct: 67 KDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVE 108
>gi|62733241|gb|AAX95358.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR 135
EPRGF FV++ +DA+ A+YHM+ +L GRE++V FA + RK+P EMR
Sbjct: 1 EPRGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMR 49
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 45 LRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
L+ D+ + +T P+DLR F + G + DIY+PRD ++ E RGF FV++ D DA D
Sbjct: 63 LKVDNLTFRTT-----PDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKRDAED 117
Query: 105 AKYHMDGYLLLGRELTVVFA 124
A MDG +L GREL V A
Sbjct: 118 ALDAMDGRILDGRELRVQMA 137
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
TSL V N+ S+ T+T DL FG+FG + D+Y+PRD ++ RGF FV Y
Sbjct: 2 TSLKVGNI---SYRTRTL-------DLHHIFGKFGDVGDVYIPRDKHSKHSRGFAFVSY 50
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 13/87 (14%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ PEDLR F + G + DIY+PRD +T E RGF FV+Y
Sbjct: 14 VSLKVDNL--------TYRTT--PEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFVRYR 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA MDG +L GREL V A
Sbjct: 64 DAEDALDA---MDGRMLDGRELRVQMA 87
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 13/98 (13%)
Query: 30 GGR---GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTG 86
GGR G D SL V NL TY++ PE L+ F ++G + D+Y+PRD Y+
Sbjct: 4 GGRPPPGLDNMVSLKVDNL--------TYRT--SPETLKRSFEKYGDVGDVYIPRDRYSR 53
Query: 87 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
E RGF FV++ D DA DA MDG + GR L V A
Sbjct: 54 ESRGFAFVRFYDKRDAEDAMDCMDGKTMDGRVLRVAMA 91
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
T++ V N+ D R ++L+ FG++G + LP DYY+G P+GF FVQ+
Sbjct: 6 TTIYVGNIPED----------LRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFE 55
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
D DA ++ + GY + R L + FA +K P EMR R
Sbjct: 56 DIRDAEESFDRLQGYRIGKRSLRLEFATGTKKTPDEMRTVTR 97
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE--ENRKKPSEMRARE 138
+A A +DG ++ GRE+TV FA+ N +K S+ R E
Sbjct: 67 KDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVE 108
>gi|413949175|gb|AFW81824.1| hypothetical protein ZEAMMB73_636417 [Zea mays]
Length = 102
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 5/51 (9%)
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARERF--RSRSYDGR---RSPPRY 154
MDG +LLGR++ VVF EENRKKPS+MRARE+ R RSYDGR RSP Y
Sbjct: 1 MDGKMLLGRKIAVVFVEENRKKPSDMRAREKISGRGRSYDGRLRSRSPGLY 51
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 45 LRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
L+ D+ S +T P+DLR F ++G + DI++PRD YT + +GFGFV++ DA
Sbjct: 16 LKIDNISYQTA-----PQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEY 70
Query: 105 AKYHMDGYLLLGRELTVVFA 124
A MDG + GRE+ V A
Sbjct: 71 AMDRMDGRWVDGREIRVAMA 90
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y
Sbjct: 17 SLLVLNV---SFRTTA-------DDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A DA +DG GR L V FA+
Sbjct: 67 EDEAQDAIDGLDGMRFDGRALMVQFAK 93
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
+L+ D+ + +T K EDL F ++G + D+Y+PRD YT E +GF FV+Y + DA
Sbjct: 13 SLKVDNLTYRTSK-----EDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEKRDAE 67
Query: 104 DAKYHMDGYLLLGRELTVVFA 124
DA MDG +L GREL V A
Sbjct: 68 DAIDSMDGAVLDGRELRVQTA 88
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
+L+ D+ + +T PEDLR F + G + DIY+PRD YT E RGF FV++ D DA
Sbjct: 15 SLKVDNLTYRTT-----PEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAE 69
Query: 104 DAKYHMDGYLLLGRELTVVFA 124
+A +DG +L GREL V A
Sbjct: 70 EALDSLDGRMLDGRELRVQMA 90
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++P+D TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVERLDGRMVDGREITVQFAK 93
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A+ A +DG ++ GRE+TV FA+
Sbjct: 67 ADEASKAVDRLDGRMVDGREITVQFAK 93
>gi|449662790|ref|XP_004205613.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Hydra
magnipapillata]
Length = 73
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 10/66 (15%)
Query: 32 RGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 91
RG PTS+ VRN+ HD RPEDLR F ++G + D+Y+P DYYT E RGF
Sbjct: 4 RGGRTPTSVFVRNVHHD----------VRPEDLRRVFEKYGDISDVYVPLDYYTRESRGF 53
Query: 92 GFVQYI 97
++QY+
Sbjct: 54 AYIQYL 59
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 47 HDSFSTKT--YKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
+D FS K R +DLR F +FG + D+++P D YTG RGFGFV++ + DA D
Sbjct: 7 NDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAED 66
Query: 105 AKYHMDGYLLLGRELTVVFAEENRK 129
A MD G +TV A N++
Sbjct: 67 AIRDMDNKEFQGCRITVAAAMYNKE 91
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y
Sbjct: 17 SLLVLNV---SFRTTA-------DDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A DA +DG GR L V FA+
Sbjct: 67 EDEAQDAIDGLDGMRFDGRALMVQFAK 93
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++P+D TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVERLDGRMVDGREITVQFAK 93
>gi|312066967|ref|XP_003136521.1| hypothetical protein LOAG_00933 [Loa loa]
Length = 345
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 28/124 (22%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPR--GFGFVQYIDPA---------------- 100
RP+DLR F + G ++D+Y+P DYYT E R G G VQ +
Sbjct: 25 ARPDDLRALFERMGPVRDVYIPLDYYTRESRVGGVGKVQAFSVSGISSTNYQANLQVQVF 84
Query: 101 ----DAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY-S 155
DA DA ++G +LGR + V +AE RK +EMRAR+ SY R RY S
Sbjct: 85 EFTRDAEDALRKLNGASILGRPIEVEWAEGQRKTKTEMRARD-----SYSSYRVRNRYRS 139
Query: 156 RSPH 159
RSPH
Sbjct: 140 RSPH 143
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++P+D TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A+ A +DG ++ GRE+TV FA+
Sbjct: 67 ADEASKAVDRLDGRMVDGREITVQFAK 93
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++P+D TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A+ A +DG ++ GRE+TV FA+
Sbjct: 67 ADEASKAVDRLDGRMVDGREITVQFAK 93
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46 Splicing
Factor
Length = 103
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF FV++ D DA
Sbjct: 15 TLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQ 69
Query: 104 DAKYHMDGYLLLGRELTVVFAEENRKKPS 132
DA+ MDG L GREL V A R+ S
Sbjct: 70 DAEAAMDGAELDGRELRVQVARYGRRDLS 98
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++P+D TGE RGF FV+Y
Sbjct: 17 SLLVLNV--------TFRTTA--DDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A+ A +DG ++ GRE+TV FA+
Sbjct: 67 ADEASKAVDRLDGRMVDGREITVQFAK 93
>gi|254424963|ref|ZP_05038681.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
gi|196192452|gb|EDX87416.1| RNA-binding protein, putative [Synechococcus sp. PCC 7335]
Length = 92
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ EDL G FG++G +K I LP D TG PRGF FV+ + A A +DG +GRE
Sbjct: 12 AKEEDLEGVFGEYGTVKRITLPTDRETGRPRGFAFVEMEEDATEEKAIEALDGAEWMGRE 71
Query: 119 LTVVFAEENRKKPSEMRAR 137
L V N+ KP E R R
Sbjct: 72 LRV-----NKAKPREPRNR 85
>gi|154418572|ref|XP_001582304.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121916538|gb|EAY21318.1| hypothetical protein TVAG_166930 [Trichomonas vaginalis G3]
Length = 202
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 31/160 (19%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
+L VR + H S E L F ++G +KD+Y+P+D+ +G R +V+Y D
Sbjct: 3 TLFVRPINHVS-----------KEFLLSRFSEYGEVKDLYIPKDFKSGRRRTIAYVKYDD 51
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYS--- 155
+A+ A ++G + G+E+ V ++ E +K P EM A + R PP+Y+
Sbjct: 52 KVEASKAIEGLNGKEINGKEIYVSWSSEKQKTPDEMEAAKAQRQLERQENPKPPKYTPEE 111
Query: 156 -----RSPHYARG-----YSRSPDY-------YSPPPRRG 178
+ H+A G Y + DY Y+P +RG
Sbjct: 112 HELYLKKKHFAEGEFHEKYFTAVDYPLGVGEEYTPVFQRG 151
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 29 DDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRV 88
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 89 QIAKYGRPTPN 99
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 47 HDSFSTKT--YKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
+D FS K R +DLR F +FG + D+++P D YTG RGFGFV++ + DA D
Sbjct: 508 NDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAED 567
Query: 105 AKYHMDGYLLLGRELTVVFAEENRK 129
A MD G +TV A N++
Sbjct: 568 AIRDMDNKEFQGNRITVAAAMYNKE 592
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVERLDGRVVDGREITVQFAK 93
>gi|294921861|ref|XP_002778742.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239887462|gb|EER10537.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 840
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 47 HDSFSTKT--YKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
+D FS K R +DLR F +FG + D+++P D YTG RGFGFV++ + DA D
Sbjct: 750 NDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAED 809
Query: 105 AKYHMDGYLLLGRELTVVFAEENRK 129
A MD G +TV A N++
Sbjct: 810 AIRDMDNKEFQGNRITVAAAMYNKE 834
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++P+D TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVERLDGRMVDGREITVQFAK 93
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ P+DLR F + G + DIY+PRD YT E RGF FV++
Sbjct: 14 VSLKVDNL--------TYRTT--PDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFF 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
+ DA +A +DG +L GREL V A
Sbjct: 64 ERRDAEEALDSLDGRMLDGRELRVQMA 90
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVDRLDGRIVDGREITVQFAK 93
>gi|219115986|ref|XP_002178788.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409555|gb|EEC49486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 89
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
+R F FG +K + +P DY +G+ +GF FV+ DP D +A ++MDG LLGR L V
Sbjct: 22 VRAAFIPFGAVKSLDIPMDYVSGKHKGFAFVELGDPDDVTEAIFNMDGAELLGRTLKVSL 81
Query: 124 AEENR 128
A+ N+
Sbjct: 82 AQANQ 86
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+ V FA+
Sbjct: 67 EDEAQKAVDRLDGRVVDGREIMVQFAK 93
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+ V FA+
Sbjct: 67 EDEAQKAVDRLDGRVVDGREIMVQFAK 93
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 18 SLLVLNI--------TFRTTA--DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKY 67
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG L+ GRE+ V FA+
Sbjct: 68 EDEAQKAVERLDGRLVDGREIMVQFAK 94
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
+L+ D+ S +T P+DLR F ++G + DI++PRD YT + +GFGFV+Y DA
Sbjct: 15 SLKIDNISYQT-----TPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYYSRRDAE 69
Query: 104 DAKYHMDGYLLLGRELTVVFA 124
A MDG + GRE+ V A
Sbjct: 70 YAMDRMDGRWIDGREIRVALA 90
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S+LV N+ SF T +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y
Sbjct: 19 SILVLNV---SFRTTA-------DDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A DA +DG GR L V FA+
Sbjct: 69 EDEARDAIDGLDGMRFDGRALMVQFAK 95
>gi|242089645|ref|XP_002440655.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
gi|241945940|gb|EES19085.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
Length = 241
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 81/191 (42%), Gaps = 44/191 (23%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R +D F ++GRL+++ L RD FGFV++ DP DA DA++ +DG G +
Sbjct: 12 RTQDHEDLFSKYGRLRNVDLKRD--------FGFVEFSDPRDADDARHDLDGRRFDGSYI 63
Query: 120 TVVFAEENRKKPSEMRARER---FRSRSY--------------DGRRSPPRYSRSPHYAR 162
V FA R+ P + R F R Y D R R H R
Sbjct: 64 IVEFARGARRGPGGVPLDVRGPPFPGRCYNCGMDGWVRDCKADDWRDRCFRCGELGHIER 123
Query: 163 GYSRSPDYY--------SPPPRRGRD-----SRSISPRYRRYRERSYSRSPYGSRSYSPS 209
SP SP P G+ S+S+SP + R R RSYSRSP S
Sbjct: 124 NCKNSPKDLKRGRSYSRSPSPHHGKGRGRSYSKSLSPHHGRGRGRSYSRSP------SHC 177
Query: 210 RSRSRSLDYSR 220
R R RS YSR
Sbjct: 178 RGRGRSWSYSR 188
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+ V FA+
Sbjct: 67 AEEAQKAVDRLDGRVVDGREIMVQFAK 93
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S+LV N+ SF T +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y
Sbjct: 19 SILVLNV---SFRTTA-------DDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A DA +DG GR L V FA+
Sbjct: 69 EDEARDAIDGLDGXRFDGRALMVQFAK 95
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
++LR FGQFG + D+Y+ D TG PRGF FV P +A A ++G L GR LTV
Sbjct: 18 DELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAEKLNGVDLGGRALTV 77
Query: 122 VFAEENRKKPSE 133
N +P E
Sbjct: 78 -----NEARPKE 84
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 33/172 (19%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++D+ + RDY FV++ DP DA DA++++DG G +
Sbjct: 23 RSRDLEHLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARHYLDGKDFDGSRI 74
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSP 173
V FA+ + SR Y GR PP R H+AR ++ D+ +
Sbjct: 75 IVEFAKGVPRG-----------SREYLGRGPPPGSGRCFNCGIDGHWARD-CKAGDWKNK 122
Query: 174 PPR---RGRDSRSI--SPRYRRYRERSYSRSPYGSRSYSPSRSRSRSLDYSR 220
R RG R+ SP+ R RSYSRSP RS SP R RSRS YSR
Sbjct: 123 CYRCGERGHIERNCKNSPKKLTKRGRSYSRSP--DRSPSPHRGRSRSPSYSR 172
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C +D+R F +FG + +++LP D +G+ +GF FV Y+ P DA A MDG ++ GR
Sbjct: 224 CSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEMDGQVIKGRI 283
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGRRS---PPRYSRSPHYARGYSRSPD 169
+ V +A+ + P E+ +++Y +++ R S ++A Y R PD
Sbjct: 284 IHVNYAKAD---PYAQTTEEK-EAKTYKDKKANELKKRASNQFNWATLYMR-PD 332
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y
Sbjct: 19 SLLVLNV---SFRTTA-------DDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 68
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A DA +DG GR L V FA+
Sbjct: 69 EDEAQDAIDGLDGMRFDGRALMVQFAK 95
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLG 116
D DA DA MDG +L G
Sbjct: 64 DKRDAEDAMDAMDGAVLDG 82
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYLLLG 116
D DA DA MDG +L G
Sbjct: 64 DKRDAEDAMDAMDGAVLDG 82
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 151
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 29 DDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRV 88
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 89 QRAKYGRPTPN 99
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
++L+ F FG + ++ + RD YTG+ +GFGF+Q+ ++A +A ++G + GREL
Sbjct: 708 EQELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELK 767
Query: 121 VVFAEENR-KKPSEMRARERF 140
V FA++++ SE A+E+
Sbjct: 768 VSFAQDSKYILASEKEAKEKV 788
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 29 DDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRV 88
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 89 QRAKYGRPTPN 99
>gi|401886800|gb|EJT50818.1| hypothetical protein A1Q1_08031 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 47 HDSFSTKTYKSI--CRPE----DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 100
HD F Y + P+ D+ F Q+G + DI +PRD TG RGFGFV Y+D
Sbjct: 4 HDEFKDTAYIYVGGLHPDLSEGDVITIFSQWGEIADINMPRDKETGASRGFGFVMYMDQR 63
Query: 101 DAADAKYHMDGYLLLGRELTVVFA 124
A +M G +LGR+L V A
Sbjct: 64 STVLAVDNMSGAEVLGRKLKVDHA 87
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVERLDGTMVDGREITVQFAK 93
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVERLDGTMVDGREITVQFAK 93
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 16 DDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRV 75
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 76 QRAKYGRPTPN 86
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 18 SLLVLNI--------TFRTTA--DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKY 67
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG L+ GRE+ V FA+
Sbjct: 68 EDEAQKAVDRLDGRLVDGREIMVQFAK 94
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG +L GRE+ V FA+
Sbjct: 67 ADEAQKAIDKLDGRMLDGREIMVQFAK 93
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG L+ GRE+ V FA+
Sbjct: 67 EDEAQKAVDRLDGRLVDGREMMVQFAK 93
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P LL+ L S +T + E L FG++G + ++ L +D T + RGF F+
Sbjct: 4 DRPGKLLIGGL-----SAETTE-----ESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS-EMRARERFR 141
+ PADA DA M+G L G+ + V E KPS E R++ +
Sbjct: 54 TFESPADAKDAAKEMNGKFLDGKTIKV----EQANKPSFESGGRQKLQ 97
>gi|358253472|dbj|GAA53142.1| serine/arginine-rich splicing factor 10 [Clonorchis sinensis]
Length = 346
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
D+ F +FG + ++ +P D T + +G+ FV+Y D DAA A M G LL GR LTV
Sbjct: 54 NDVWLEFKKFGEVVNVTIPMDVNTAKAKGYAFVEYADCDDAARALNEMHGILLWGRILTV 113
Query: 122 VFAEENRKKPSEMRARERFR 141
++ K EM R + +
Sbjct: 114 QYSRSYPKTSREMALRSQLQ 133
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG +L GRE+ V FA+
Sbjct: 67 ADEAQKAIDKLDGRMLDGREIMVQFAK 93
>gi|223993321|ref|XP_002286344.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977659|gb|EED95985.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR F FG ++ I +P DY G +GF F+++++ DA +A Y+MDG L G+ LTV
Sbjct: 27 LRAAFLPFGPIQHIDMPMDYAAGTHKGFAFLEFVEADDANEAIYNMDGSELFGKSLTVNV 86
Query: 124 AEENRKKPSEMRA----RERFRSRS 144
A+ + K +A E F+ ++
Sbjct: 87 AQAEKMKLGSSKAVWSTEEWFKEQA 111
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTSA--DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRAR 137
+A A +DG + GR + V FA+ RK R R
Sbjct: 67 ADEAQKAIERLDGREVDGRHIVVQFAKYGRKDEPIQRGR 105
>gi|413933821|gb|AFW68372.1| hypothetical protein ZEAMMB73_804558, partial [Zea mays]
Length = 138
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
Query: 109 MDGYLLLGRELTVVFAEENRKKPSEMRARERFRSR--SYD 146
MDG +LLGRE+ VVFAEENRKKPS+MRARE+ R SYD
Sbjct: 1 MDGKMLLGREINVVFAEENRKKPSDMRAREKISGRGCSYD 40
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ + L F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DGLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A+ A +DG ++ GRE+TV FA+
Sbjct: 67 ADEASKAVDRLDGRMVDGREITVQFAK 93
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 44 NLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAA 103
L+ D+ + +T P+ LR F ++GR+ D+Y+PR+++T PRGF FV++ + DA
Sbjct: 15 TLKVDNLTYRT-----SPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHNRRDAE 69
Query: 104 DAKYHMDGYLLLGREL 119
DA+ MDG L GREL
Sbjct: 70 DAEDAMDGAELDGREL 85
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 29 DDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRV 88
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 89 QRAKYGRPTPN 99
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
+L+ F FG + ++ + RD YTG+ +GFGF+Q+ ++A +A ++G + GREL V
Sbjct: 742 ELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELKVS 801
Query: 123 FAEENR-KKPSEMRARERF 140
FA++++ SE A+E+
Sbjct: 802 FAQDSKYILASEKEAKEKI 820
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ P+ LR F ++GR+ D+Y+PRD +T RGF FV++
Sbjct: 4 ISLKVDNL--------TYRT--SPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFY 53
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
A DA +DG +L GR+L V A
Sbjct: 54 CKNHAEDALDAVDGVVLDGRKLRVQMA 80
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
+R F G + D+Y+PRD TG RGF FV++ID +A DA M+ + GR + V F
Sbjct: 27 VREMFAAHGEIGDVYMPRDRTTGNSRGFAFVRFIDKNEAEDAIKAMNEKEIEGRAIRVAF 86
Query: 124 AEE 126
AEE
Sbjct: 87 AEE 89
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG L+ GRE+ V FA+
Sbjct: 67 EDEAQKAVDRLDGRLVDGREIMVQFAK 93
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 18 SLLVLNI--------TFRTTA--DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKY 67
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG L+ GRE+ V FA+
Sbjct: 68 EDEAQKAVDRLDGRLVDGREIMVQFAK 94
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 49 SFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYH 108
S S + +R F FG + DIY+PRD T RGF FV++ + ADA A
Sbjct: 15 SLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVRFYEEADADKAAEK 74
Query: 109 MDGYLLLGRELTVVFAE 125
MDG+ GR+L V A+
Sbjct: 75 MDGHAFEGRDLIVQKAK 91
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
SL V NL TY++ EDL+ F + G + D+Y+PR+ E RGF FV++
Sbjct: 74 VSLKVDNL--------TYRTTV--EDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRFF 123
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAE 125
D DA +A +DGY L GREL + A+
Sbjct: 124 DRRDAEEAMDALDGYRLDGRELRIAMAK 151
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 29 YGGRGR-DL--PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYT 85
+GGRG D+ SL V NL TY++ EDL+ F + G + D+Y+PR+
Sbjct: 3 FGGRGPPDIHGMVSLKVDNL--------TYRTTV--EDLKRVFRKHGDVGDVYIPRNPRN 52
Query: 86 GEPRGFGFVQY 96
E RGF FV++
Sbjct: 53 NESRGFAFVRF 63
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
T L + L + +TK LR F Q+GRL++ ++ D +G RGFGFV +
Sbjct: 14 TRLFIGGLSSEVDNTK----------LREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
DP DA DA M G L GR + V A
Sbjct: 64 DPEDAQDAIDQMTGKELCGRSIRVSHA 90
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 29 DDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYYTDREADCAIRGMDGHKVDGREVRV 88
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 89 QRAKYGRPTPN 99
>gi|300122032|emb|CBK22606.2| unnamed protein product [Blastocystis hominis]
Length = 119
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L G F FG +K++ +P D TG RGFGFV++ D DAA+A+ +M+ L G+ + V +
Sbjct: 25 LLGVFVPFGEVKEVTIPLDAGTGLKRGFGFVEFEDAEDAAEARDNMNNAELFGKVIKVTY 84
Query: 124 AEENRKKPS 132
+ NR KPS
Sbjct: 85 S--NRMKPS 91
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 30 GGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPR 89
GG R P + +L+ D+ S +T P DLR F ++G + D+++PRD Y+ + +
Sbjct: 6 GGDRRAAPDINGLTSLKIDNLSYQTT-----PNDLRRTFERYGDIGDVHIPRDKYSRQSK 60
Query: 90 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 128
GFGFV++ + DA A DG L+ GREL V A+ +R
Sbjct: 61 GFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDR 99
>gi|735966|emb|CAA56649.1| surface antigen [Entamoeba histolytica]
Length = 294
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C ++ R F +FG + +I+LP D T + +GFG V ++ P DA A MD + GR
Sbjct: 197 CTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDAVKACNEMDNKFIKGRI 256
Query: 119 LTVVFAEEN--------------RKKPSEMRAR 137
+ V +A+ + KKP+E++A+
Sbjct: 257 VHVTYAKADPYSSQQTGESKNYKEKKPNELKAK 289
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ DIY+PRD+ TG+PRGF FV+Y
Sbjct: 17 SLLVLNV---SFRTTA-------DDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A DA +DG GR L V FA+
Sbjct: 67 EDEAQDAIDGLDGMRFDGRALMVQFAK 93
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 30 GGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPR 89
GG R P + +L+ D+ S +T P DLR F ++G + D+++PRD Y+ + +
Sbjct: 5 GGDRRAAPDINGLTSLKIDNLSYQTT-----PNDLRRVFDRYGDIGDVHIPRDKYSRQSK 59
Query: 90 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 128
GFGFV++ + DA A DG L+ GREL V A+ +R
Sbjct: 60 GFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDR 98
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 30 GGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPR 89
GG R P + +L+ D+ S +T P DLR F ++G + D+++PRD Y+ + +
Sbjct: 6 GGDRRAAPDINGLTSLKIDNLSYQTT-----PNDLRRTFERYGDIGDVHIPRDKYSRQSK 60
Query: 90 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 128
GFGFV++ + DA A DG L+ GREL V A+ +R
Sbjct: 61 GFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDR 99
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 30 GGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPR 89
GG R P + +L+ D+ S +T P DLR F ++G + D+++PRD Y+ + +
Sbjct: 5 GGDRRAAPDINGLTSLKIDNLSYQTT-----PNDLRRVFERYGDIGDVHIPRDKYSRQSK 59
Query: 90 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 128
GFGFV++ + DA A DG L+ GREL V A+ +R
Sbjct: 60 GFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDR 98
>gi|355749288|gb|EHH53687.1| hypothetical protein EGM_14374, partial [Macaca fascicularis]
Length = 148
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 20/107 (18%)
Query: 36 LPTS----LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 91
LP S L +RN ++S R +DL FG++G + D+Y+P D+YT PRG
Sbjct: 2 LPVSPKVPLFIRNGANNS----------RFKDLWHEFGRYGPIVDVYVPLDFYTHCPRGV 51
Query: 92 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
+VQ D DA DA +++D + G ++ + + P++M+A+E
Sbjct: 52 AYVQLEDVRDAEDALHNLDRKWICGCQMRI------GRPPNQMKAKE 92
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 18 SLLVLNI--------TFRTTA--DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKY 67
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG L+ GRE+ V FA+
Sbjct: 68 EDEAQKAVERLDGRLVDGREIMVQFAK 94
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 29 DDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRV 88
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 89 QRAKYGRPTPN 99
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD YT E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 29 DDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRV 88
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 89 QRAKYGRPTPN 99
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 85/172 (49%), Gaps = 34/172 (19%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++D+ + RDY FV++ DP DA DA++++DG G +
Sbjct: 23 RSRDLEHLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARHYLDGKEFDGSRI 74
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSP 173
V FA+ + SR Y GR PP R H+AR ++ D+ +
Sbjct: 75 IVEFAKGVPRG-----------SREYLGRGPPPGSGRCFNCGIDGHWARD-CKAGDWKNK 122
Query: 174 PPR---RGRDSRSI--SPRYRRYRERSYSRSPYGSRSYSPSRSRSRSLDYSR 220
R RG R+ SP+ + R +SYSRSP RS SP R RSRS YSR
Sbjct: 123 CYRCGERGHIERNCKNSPK-KLTRGKSYSRSP--GRSRSPHRGRSRSPSYSR 171
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
++ TS+ V NL ++ T +Y LR F ++G + D+Y+PRD T E RGF F+
Sbjct: 10 EVMTSIKVNNL---TYHTSSYT-------LRRMFEKYGPIDDVYIPRDRLTNESRGFAFI 59
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAE-----ENRKKPSEM 134
++ A DA +DG LL G EL V A E + PSE+
Sbjct: 60 RFCYKHHAEDALGALDGILLDGHELQVQLAHCACPLELCQGPSEL 104
>gi|448878429|gb|AGE46177.1| arginine/serine-rich splicing factor SCL42 transcript II
[Physcomitrella patens subsp. patens]
Length = 106
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 56/91 (61%), Gaps = 16/91 (17%)
Query: 1 MRGRSYSYSPSPPR---DYGRRYRSPSPRGHYGGRGRD--LPTSLLVRNLRHDSFSTKTY 55
MRGRS SPPR G R RSPSPRG GG GRD P+SLLVRN+ D
Sbjct: 1 MRGRS-PLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRD------- 52
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTG 86
C EDLR PF ++G +KD+YLPRDYYTG
Sbjct: 53 ---CSAEDLRIPFERYGVVKDVYLPRDYYTG 80
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 77/152 (50%), Gaps = 27/152 (17%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++++ L RDY F++Y DP DA DA+Y++DG + G +
Sbjct: 23 RTRDLEYLFSRYGRIREVELKRDY--------AFIEYSDPRDADDAQYNLDGRDVDGSRI 74
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSP 173
V FA+ + P R RE Y GR PP R H+AR ++ D+ +
Sbjct: 75 IVEFAKGIPRGPGGSRERE------YMGRGPPPGTGRCFNCGIDGHWARD-CKAGDWKNK 127
Query: 174 PPR---RGRDSRSI--SPRYRRYRERSYSRSP 200
R RG R+ SPR R RERSYSRSP
Sbjct: 128 CYRCGERGHIERNCQNSPRSLR-RERSYSRSP 158
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ FG FGR+ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 110 EDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRT 169
Query: 122 VFAEENRKKPSEMRARERF-RSRSYDGRRSPPRYSRSPHYARGYS 165
+A RK P+ E + S+D + S Y G S
Sbjct: 170 NWA--TRKPPAPKTTHENNSKHLSFDEVVNQSSPSNCTVYCGGVS 212
>gi|320165916|gb|EFW42815.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 113
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 10/59 (16%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
+L VRNL +D+ RP+D+R F + G +KDIYLPRDYY+ + RGFG+V+Y
Sbjct: 62 ATLHVRNLTYDA----------RPDDIREIFAKCGNVKDIYLPRDYYSNKLRGFGYVEY 110
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDG 111
D DA DA MDG
Sbjct: 64 DKRDAEDAMDAMDG 77
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C +D+R F +FG + +I+LP D T + +GFGFV ++ P DA A MD + GR
Sbjct: 198 CTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRI 257
Query: 119 LTVVFAEEN--------------RKKPSEMRAR 137
+ V +A+ + KK +E++A+
Sbjct: 258 VHVTYAKADPYSNQQVGESKNYKEKKQNELKAK 290
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+++R F +G L+ + LP+ G+ +GF FV+Y +AA+A + GR L +
Sbjct: 618 KEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLII 676
Query: 122 VFAEE 126
+A++
Sbjct: 677 EYAKD 681
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C +D+R F +FG + +I+LP D T + +GFGFV ++ P DA A MD + GR
Sbjct: 198 CTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRI 257
Query: 119 LTVVFAEEN--------------RKKPSEMRAR 137
+ V +A+ + KK +E++A+
Sbjct: 258 VHVTYAKADPYSNQQVGESKNYKEKKQNELKAK 290
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+++R F +G L+ + LP+ G+ +GF FV+Y +AA+A + GR L +
Sbjct: 618 KEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLII 676
Query: 122 VFAEE 126
+A++
Sbjct: 677 EYAKD 681
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDG 111
D DA DA MDG
Sbjct: 64 DKRDAEDAMDAMDG 77
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F +FG + DIY+PRD T E RGF FV+Y +A A MDG+ + GRE+ V
Sbjct: 29 DDLRRVFSRFGEVGDIYIPRDPCTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRV 88
Query: 122 VFAEENRKKPS 132
A+ R P+
Sbjct: 89 QRAKYGRPTPN 99
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 89
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ E++R F +G ++D+ + D TG RGF F+ Y P++A +A M+G + GR
Sbjct: 15 LKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFITYASPSEAEEAVAQMNGQPIDGRN 74
Query: 119 LTVVFAEENRKK 130
L V FAE+ RK+
Sbjct: 75 LKVTFAEDKRKE 86
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNV--------TFRTTA--DDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+ V FA+
Sbjct: 67 QDEAQKAVEKLDGRVVDGREIMVRFAK 93
>gi|357162700|ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845138 [Brachypodium
distachyon]
Length = 929
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
+SL VRNL S S E+L F FG++ D +PRDY TG +G+GFV+Y
Sbjct: 308 SSLYVRNL---SLSMT-------KEELLQHFLPFGKIIDAKVPRDYATGLNKGYGFVRYS 357
Query: 98 DPADAADAKYHMDGYLLLGRELTV 121
+ +AA+A H++G+L+ G+++ V
Sbjct: 358 NSHEAANAIIHLNGHLVEGKKMEV 381
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 14 RDYGRRYRSPSPRGHYGGRGRDLP-TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFG 72
+ G+R P GG+ +++ T+L V NL S ++K I +L PFG+
Sbjct: 179 KHLGKRQEHTLPLSQEGGKLKEVDNTNLYVGNL---PASVGSHKLI----ELFLPFGRIV 231
Query: 73 RLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
R K + + +TG +G+GFV+Y DP A A M+G L+ G+ L V
Sbjct: 232 RSK---VADECFTGLSKGYGFVKYDDPHSATAAINRMNGRLVDGKILEV 277
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E L F G++ + D YTG +GFGFV++ D AA A HM+GY L G L V
Sbjct: 719 EKLIEIFLPCGQITQARVVTDRYTGISKGFGFVRFADTYSAAVALTHMNGYPLEGHILEV 778
Query: 122 VFAEENRKKPSEM 134
A + PS+M
Sbjct: 779 RIAGVH---PSDM 788
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
++L+ F FG + D+ + RD YTG+ +GFGF+Q+ ++A +A M+G + GRE+ V
Sbjct: 271 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 330
Query: 122 VFAEENR 128
+A++++
Sbjct: 331 SYAQDSK 337
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C +D+R F +FG + +I+LP D T + +GFGFV ++ P DA A MD + GR
Sbjct: 197 CTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRI 256
Query: 119 LTVVFAEEN--------------RKKPSEMRAR 137
+ V +A+ + KK +E++A+
Sbjct: 257 VHVTYAKADPYSNQQVGESKNYKEKKQNELKAK 289
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+++R F +G L+ + LP+ G+ +GF FV+Y +AA+A + GR L +
Sbjct: 630 KEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLII 688
Query: 122 VFAEE 126
+A++
Sbjct: 689 EYAKD 693
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ +F T +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI---TFRTTA-------DDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVERLDGRVVDGREITVQFAK 93
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 67/136 (49%), Gaps = 24/136 (17%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF F+ + PADA A M+G L G+ + V
Sbjct: 24 LEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDMNGKSLDGKAIKVAQ 83
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRS 183
A KP+ F S GRR PP SRS RGYS S DY S RD+R
Sbjct: 84 A----TKPA-------FES----GRRGPP-LSRS--RGRGYS-SRDYSS-----ARDARD 119
Query: 184 ISPRYRRYRERSYSRS 199
+P R Y R Y S
Sbjct: 120 FAPSPREYTYRDYGHS 135
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ +F T +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI---TFRTSA-------DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRAR 137
+A A +DG + GR + V FA+ RK R R
Sbjct: 67 ADEAQKAIERLDGREVDGRHIVVQFAKYGRKDEPIQRGR 105
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E L+ FG+ G + D+Y+PRDYYT RGF FV++ D A DA D L GR +
Sbjct: 45 EQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRFKDRTAAEDAIKEFDQKELNGRPIAC 104
Query: 122 VFAEENR 128
FAE+ R
Sbjct: 105 RFAEKPR 111
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 45 LRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
L+ D+ S +T P+DLR F ++G + DI++PRD YT + +GFGFV++ DA
Sbjct: 292 LKIDNISYQT-----APQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEY 346
Query: 105 AKYHMDGYLLLGRELTVVFA 124
A MDG + GRE+ V A
Sbjct: 347 AMDRMDGRWVDGREIRVAMA 366
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL + NL S+ T + E LR F ++G + D+Y+P+D Y GE RGF FV++
Sbjct: 13 TSLKIDNL---SYRTDS-------ESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFH 61
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENR 128
D DA DA +DG + GRE+ V +A R
Sbjct: 62 DKRDAGDAIDQLDGRDIDGREIRVDYARHER 92
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL + NL S+ T E LR F +FG + D+Y+P+D + GE RGF FV++
Sbjct: 13 TSLKIDNL---SYRTDA-------ESLRRTFSKFGEIGDVYIPKDKH-GESRGFAFVRFH 61
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENR 128
D DA DA + G L GRE+ V +A R
Sbjct: 62 DKRDAGDAIDDLAGKDLDGREIRVDYARHER 92
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL + NL S+ T + E LR F ++G + D+Y+P+D Y GE RGF FV++
Sbjct: 13 TSLKIDNL---SYRTDS-------ESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFH 61
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENR 128
D DA DA +DG + GRE+ V +A R
Sbjct: 62 DKRDAGDAIDQLDGRDIDGREIRVDYARHER 92
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
PEDL FG +G +K + LP D TG+PRGFGFV+ + + A +DG LGR+
Sbjct: 12 VTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEELDGAEWLGRQ 71
Query: 119 LTVVFAEENRKKPSEMRA 136
+ V N+ KP E +
Sbjct: 72 MRV-----NKAKPRENKG 84
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C +D+R F +FG + +I+LP D T + +GFGFV ++ P DA A MD + GR
Sbjct: 197 CTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEMDNKFIKGRI 256
Query: 119 LTVVFAEEN--------------RKKPSEMRAR 137
+ V +A+ + KK +E++A+
Sbjct: 257 VHVTYAKADPYSSQQTGESKNYKEKKQNELKAK 289
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+++R F +G L+ + LP+ G+ +GF FV+Y +AA+A + GR L +
Sbjct: 630 KEVRELFRTYGTLRGVRLPKKV-DGQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLII 688
Query: 122 VFAEE 126
+A++
Sbjct: 689 EYAKD 693
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYL 113
D DA DA MDG +
Sbjct: 64 DKRDAEDAMDAMDGAV 79
>gi|448878433|gb|AGE46179.1| arginine/serine-rich splicing factor SCL42 transcript IV
[Physcomitrella patens subsp. patens]
Length = 103
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 56/91 (61%), Gaps = 16/91 (17%)
Query: 1 MRGRSYSYSPSPPR---DYGRRYRSPSPRGHYGGRGRD--LPTSLLVRNLRHDSFSTKTY 55
MRGRS SPPR G R RSPSPRG GG GRD P+SLLVRN+ D
Sbjct: 1 MRGRS-PLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRD------- 52
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTG 86
C EDLR PF ++G +KD+YLPRDYYTG
Sbjct: 53 ---CSAEDLRIPFERYGVVKDVYLPRDYYTG 80
>gi|408794570|ref|ZP_11206175.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461805|gb|EKJ85535.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 89
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 115
K + E++R F +G ++D+ + D TG RGF F+ Y +P +A +A M+G +
Sbjct: 12 KFTLKEENIRQIFSVYGVIQDLKMIHDRETGNFRGFAFITYANPEEAEEAVTQMNGQPVD 71
Query: 116 GRELTVVFAEENRKK 130
GR L V FAE+ RK+
Sbjct: 72 GRNLKVTFAEDKRKE 86
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+TV FA+
Sbjct: 67 ADEAQKAVERLDGRVVDGREITVQFAK 93
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYT-GEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
DLR F FG L+ + L RD G +G+GFVQ++DPA A +A M+G+ L GR++ V
Sbjct: 292 DLRDIFEPFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAEMNGFELAGRQIRV 351
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G + DIY+PRD TG+ RGF FV+Y
Sbjct: 18 SLLVLNI--------TFRTTA--DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKY 67
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG L+ GRE+ V FA+
Sbjct: 68 EDEAQKAVDRLDGRLVDGREIMVQFAK 94
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKY-HMDGYLLLGR 117
R E L+ FGQ+G++ + + D YTG+ +GFGFV+ ++ DAA+A +DG L GR
Sbjct: 14 TREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVE-MEEMDAAEAAISALDGTSLDGR 72
Query: 118 ELTVVFAEENRKKP 131
EL V A+E ++P
Sbjct: 73 ELRVNEAKERERRP 86
>gi|448878431|gb|AGE46178.1| arginine/serine-rich splicing factor SCL42 transcript III
[Physcomitrella patens subsp. patens]
Length = 80
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 56/91 (61%), Gaps = 16/91 (17%)
Query: 1 MRGRSYSYSPSPPR---DYGRRYRSPSPRGHYGGRGRD--LPTSLLVRNLRHDSFSTKTY 55
MRGRS SPPR G R RSPSPRG GG GRD P+SLLVRN+ D
Sbjct: 1 MRGRS-PLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRD------- 52
Query: 56 KSICRPEDLRGPFGQFGRLKDIYLPRDYYTG 86
C EDLR PF ++G +KD+YLPRDYYTG
Sbjct: 53 ---CSAEDLRIPFERYGVVKDVYLPRDYYTG 80
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+ V FA+
Sbjct: 67 ADEAQKAVDRLDGRVVDGREIMVQFAK 93
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 25 PRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYY 84
PR YG T +V R + + L FG++GR+ ++ L +D
Sbjct: 11 PRAFYGRASSGYNTVKMVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRE 70
Query: 85 TGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
T + RGF FV + PADA DA M+G L G+ + V E KPS
Sbjct: 71 TNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 114
>gi|297710828|ref|XP_002832064.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Pongo
abelii]
Length = 1051
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L + KT + + E FG++GR+ ++L +D T + RGF FV
Sbjct: 5 DRPEKLFVGGL-----NLKTDEKALKAE-----FGKYGRIIKVFLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM-------RARERFRSRSYDG 147
+ PADA A M+G L G+ + V A + K S R RF R+ G
Sbjct: 55 TFESPADAKAAARDMNGKCLDGKSIKVAQAIKQAFKNSRWVPPTPGSSGRSRFSHRTRRG 114
Query: 148 RRSPPR 153
SP R
Sbjct: 115 GSSPQR 120
>gi|347446708|ref|NP_001231529.1| ELAV-like protein 4 isoform 1 [Danio rerio]
Length = 411
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 22 SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPR 81
PSP GG D T+L+V L + E+ R FG G ++ L R
Sbjct: 73 CPSPM-QTGGSNDDSKTNLIVNYLPQN----------MTQEEFRSLFGSIGEIESCKLVR 121
Query: 82 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
D TG+ G+GFV YIDP DA A ++G L + + V +A
Sbjct: 122 DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 164
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
FG FG + ++ + RD+ T + +GFGFV + +AA A ++GY L R L V F
Sbjct: 348 FGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 403
>gi|608549|gb|AAA96940.1| ribonucleoprotein [Danio rerio]
gi|68085524|gb|AAH65965.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Danio rerio]
Length = 367
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 22 SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPR 81
PSP GG D T+L+V L + E+ R FG G ++ L R
Sbjct: 29 CPSPM-QTGGSNDDSKTNLIVNYLPQN----------MTQEEFRSLFGSIGEIESCKLVR 77
Query: 82 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
D TG+ G+GFV YIDP DA A ++G L + + V +A
Sbjct: 78 DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 120
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
FG FG + ++ + RD+ T + +GFGFV + +AA A ++GY L R L V F
Sbjct: 304 FGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 359
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ +F T +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI---TFRTTA-------DDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A+ A +DG ++ GRE+TV FA+
Sbjct: 67 ADEASKAVDRLDGRMVDGREITVQFAK 93
>gi|347446713|ref|NP_571528.2| ELAV-like protein 4 isoform 3 [Danio rerio]
Length = 403
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 22 SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPR 81
PSP GG D T+L+V L + E+ R FG G ++ L R
Sbjct: 65 CPSPM-QTGGSNDDSKTNLIVNYLPQN----------MTQEEFRSLFGSIGEIESCKLVR 113
Query: 82 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
D TG+ G+GFV YIDP DA A ++G L + + V +A
Sbjct: 114 DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 156
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
FG FG + ++ + RD+ T + +GFGFV + +AA A ++GY L R L V F
Sbjct: 340 FGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 395
>gi|347446711|ref|NP_001231530.1| ELAV-like protein 4 isoform 2 [Danio rerio]
Length = 398
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 22 SPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPR 81
PSP GG D T+L+V L + E+ R FG G ++ L R
Sbjct: 60 CPSPM-QTGGSNDDSKTNLIVNYLPQN----------MTQEEFRSLFGSIGEIESCKLVR 108
Query: 82 DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
D TG+ G+GFV YIDP DA A ++G L + + V +A
Sbjct: 109 DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 151
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
FG FG + ++ + RD+ T + +GFGFV + +AA A ++GY L R L V F
Sbjct: 335 FGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 390
>gi|159474538|ref|XP_001695382.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
gi|158275865|gb|EDP01640.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
Length = 143
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 29 YGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEP 88
GG+G + T+L V L +S + T L F FG +K++ +P D+ TG
Sbjct: 8 VGGKGTNPKTTLYVGGLE-ESVNEAT---------LHAAFLPFGEIKEVNMPIDHATGTH 57
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAE 125
RGFGFV+Y + DAA A +M+ L GR L V +A+
Sbjct: 58 RGFGFVEYEEKDDAAAAIDNMNNAELFGRVLKVNYAQ 94
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDGYL 113
D DA DA MDG +
Sbjct: 64 DKRDAEDAMDAMDGAV 79
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GR P + L+ D+ + +T P+ LR F ++GR+ D+Y+PR+ +T PRGF
Sbjct: 110 GRPPPDVDGMITLKVDNLTYRTS-----PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFA 164
Query: 93 FVQYIDPADAADAKYHMDGYLL 114
FV++ D DA DA+ MDG L
Sbjct: 165 FVRFHDQRDAEDAEAAMDGAEL 186
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GRE+ V FA+
Sbjct: 67 ADEAQKAVEKLDGRNVDGREIMVQFAK 93
>gi|114691840|ref|XP_001139693.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
gi|114691960|ref|XP_001135842.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes verus]
Length = 460
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + KT K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKTLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S DGRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|114691838|ref|XP_001139951.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes]
gi|114691958|ref|XP_001136088.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes verus]
gi|410060470|ref|XP_003949299.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J [Pan troglodytes verus]
Length = 497
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + KT K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKTLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S DGRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S+ V NL +D +DL F ++G +K + LP D TG PRGFGFV+
Sbjct: 2 SIYVGNLSYD----------VTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSS 51
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSP 158
+ A +DG +GR++ V N+ KP E R S RR+ P YSR
Sbjct: 52 ENEEQKAIEALDGAEWMGRDIKV-----NKAKPREDRG-------SGGNRRNSPNYSRGG 99
Query: 159 HY 160
+
Sbjct: 100 KF 101
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHMDG 111
D DA DA MDG
Sbjct: 64 DKRDAEDAMDAMDG 77
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 30 GGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPR 89
GG R P + +L+ D+ S +T P DLR F ++G + D+++PRD Y+ + +
Sbjct: 5 GGDRRAAPDIGGLTSLKIDNLSYQTT-----PNDLRRVFERYGDIGDVHIPRDKYSRQSK 59
Query: 90 GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 128
GFGFV++ + DA A DG + GREL V A+ +R
Sbjct: 60 GFGFVRFYERRDAEHAMDRTDGKNVDGRELRVTLAKYDR 98
>gi|22299798|ref|NP_683045.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
gi|22295982|dbj|BAC09807.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
Length = 94
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
EDL F ++G +K +YLP D TG RGFGFV+ A+ A +DG +GR+L V
Sbjct: 15 EDLEAVFAEYGSVKQVYLPVDRETGRKRGFGFVEMSSDAEEEAAIADLDGAEWMGRQLKV 74
Query: 122 VFAEENRKKPSE 133
N+ +P E
Sbjct: 75 -----NKARPRE 81
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
++LR F +FG + D+Y+PR + E RGF FV++I+ DA DA M+G GR+L V
Sbjct: 371 DELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKRDAEDAIDGMEGQEFQGRDLRV 430
Query: 122 VFAEENR 128
FA++ R
Sbjct: 431 QFAKQRR 437
>gi|300869358|ref|ZP_07113948.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
gi|300332657|emb|CBN59146.1| RNA-binding region RNP-1 [Oscillatoria sp. PCC 6506]
Length = 106
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
ED+ F ++G +K ++LP D TG PRGFGFV+ A+ A +DG +GRE
Sbjct: 12 VTQEDIITVFAEYGTVKRVHLPTDRETGRPRGFGFVEMATDAEEEAAITALDGAEWMGRE 71
Query: 119 LTVVFAEENRKKP 131
L V N+ KP
Sbjct: 72 LKV-----NKAKP 79
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L +T+T + L FG++GR+ ++ L +D T + RGF F+
Sbjct: 24 DRPGKLFVGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETSKSRGFAFI 73
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
+ PADA DA M+G LL G+ + V A +
Sbjct: 74 TFESPADAKDAARDMNGKLLDGKSIKVEQATK 105
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L +T+T + L FG++GR+ ++ L +D T + RGF F+
Sbjct: 5 DRPGKLFVGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETSKSRGFAFI 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
+ PADA DA M+G LL G+ + V A +
Sbjct: 55 TFESPADAKDAARDMNGKLLDGKSIKVEQATK 86
>gi|114691962|ref|XP_001136007.1| PREDICTED: similar to RBMY1A1 protein isoform 2 [Pan troglodytes
verus]
Length = 390
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + KT K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKTLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S DGRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ DLR F ++G ++ + D T E RGF FV Y +P DA D+ ++GY LLG+E
Sbjct: 119 VKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQDAEDSLSKLNGYDLLGKE 178
Query: 119 LTV 121
+ V
Sbjct: 179 IRV 181
>gi|313246638|emb|CBY35523.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 50/79 (63%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
RP++++ F ++G ++D+++P D+ T +PRGF ++++ DA A+ ++ L +
Sbjct: 67 TRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYAQKKLNRTRLGDKM 126
Query: 119 LTVVFAEENRKKPSEMRAR 137
L V FA+ +RK P +M+ +
Sbjct: 127 LHVDFAQGDRKTPGQMKTQ 145
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
++LR F +FG + D+Y+PR + E RGF FV++++ DA DA M+G GR+L V
Sbjct: 21 DELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRDAEDAIEGMEGQEFQGRDLRV 80
Query: 122 VFAEENR 128
FA++ R
Sbjct: 81 QFAKQRR 87
>gi|302757806|ref|XP_002962326.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
gi|300169187|gb|EFJ35789.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
Length = 89
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 67 PFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
F FG ++++ + +D TG+ +G+GF+ Y+ ADA DA MDG L GRE+ V FA
Sbjct: 14 AFSSFGEVREVRIVKDRETGKSKGYGFITYVSEADAQDALQAMDGKNLNGREIRVNFAA- 72
Query: 127 NRKKPSEM 134
R PS M
Sbjct: 73 -RDIPSRM 79
>gi|428175470|gb|EKX44360.1| hypothetical protein GUITHDRAFT_50524, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ LR F FG L D+ +P D TG+ RGFGFV+Y P DAA+A ++M+ L GR
Sbjct: 13 VNVDTLRAAFIPFGELVDVNIPLDNETGKHRGFGFVEYEFPDDAAEAIFNMNNGELNGRV 72
Query: 119 LTVVFA 124
L+V A
Sbjct: 73 LSVNLA 78
>gi|313236719|emb|CBY11975.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 50/79 (63%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
RP++++ F ++G ++D+++P D+ T +PRGF ++++ DA A+ ++ L +
Sbjct: 67 TRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYAQKKLNRTRLGDKM 126
Query: 119 LTVVFAEENRKKPSEMRAR 137
L V FA+ +RK P +M+ +
Sbjct: 127 LHVDFAQGDRKTPGQMKTQ 145
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
PEDL F Q+G +K + LP D TG RGF FV+ A+ A +DG +GR
Sbjct: 12 VTPEDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFVEMDTDAEETTAIDALDGAEWMGRN 71
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGRR 149
+ V N+ KP E R S DGRR
Sbjct: 72 MKV-----NKAKPREDRG-------SSDGRR 90
>gi|340383730|ref|XP_003390369.1| PREDICTED: hypothetical protein LOC100640053 [Amphimedon
queenslandica]
Length = 449
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 50 FSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 109
F K +++ +P L F FG++K+I LP D PRG G+V++ P +A A HM
Sbjct: 314 FVGKLTRNVTKPH-LNEVFSNFGKVKNIDLPLDRLNFLPRGHGYVEFDTPDNATAAMKHM 372
Query: 110 DGYLLLGRELTVVFA 124
DG + G+++T+
Sbjct: 373 DGGWIDGQQVTIQLV 387
>gi|397581731|gb|EJK52035.1| hypothetical protein THAOC_28735 [Thalassiosira oceanica]
Length = 128
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 57 SICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 116
+ + + LR F FG + I +P DY G +GF F+++ D DA++A Y+MDG L
Sbjct: 20 TAVKLDTLRAAFIPFGPINHIEMPMDYERGTHKGFAFIEFQDADDASEAIYNMDGAELFS 79
Query: 117 RELTVVFAEENR 128
+ LTV A+ +R
Sbjct: 80 KALTVNVAQASR 91
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T P DL F ++G + D Y+PR+ G RGF FV++
Sbjct: 28 SLLVLNI---SFRTT-------PNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRK 77
Query: 99 PADAADAKYHMDGYLLLGRELTVVFA 124
DA A MDG + GR +TV FA
Sbjct: 78 EEDARKAMEEMDGREVDGRSITVQFA 103
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 186 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 245
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 246 NWA--TRKPPAPKSTQEN 261
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+D+ F ++G++K ++LP D TG+ RGF FV+ P + A A +DG +GREL V
Sbjct: 15 DDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAALDGAQWMGRELKV 74
Query: 122 VFAEENRKKPS 132
A E KPS
Sbjct: 75 NQAREREPKPS 85
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F + G + DI +PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNV---SFRTTA-------DDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR++ V FA+
Sbjct: 67 EDEAQKAVDKLDGRTVDGRDIMVQFAK 93
>gi|443326242|ref|ZP_21054903.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442794168|gb|ELS03594.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 101
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
EDL G F +G +K +YLP D +G RGFGFV+ + A+ A +DG +GRE
Sbjct: 12 VTEEDLSGVFADYGTVKRVYLPTDRESGRMRGFGFVEMANEAEEDKAIETLDGAEWMGRE 71
Query: 119 LTVVFAEENRKKPSE 133
L V N+ +P E
Sbjct: 72 LRV-----NKARPRE 81
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
EDLR F ++G + +++LP+D TG+ RGF FV + AD A +DG +GR L V
Sbjct: 15 EDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIEDLDGAEWMGRSLKV 74
Query: 122 VFAEENRKKPSE 133
N+ +P E
Sbjct: 75 -----NKARPRE 81
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 109 EDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRT 168
Query: 122 VFAEENRKKPS 132
+A RK P+
Sbjct: 169 NWA--TRKPPA 177
>gi|302829787|ref|XP_002946460.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
gi|300268206|gb|EFJ52387.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
Length = 186
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 29 YGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEP 88
GG+G + T+L V L + L F FG +K++ +P D+ TG
Sbjct: 9 VGGKGTNPKTTLYVGGL----------EETVNEATLHAAFLPFGEIKEVNIPLDHATGTH 58
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKK 130
RGFGFV+Y + DAA A +M L GR L V +A+ + K
Sbjct: 59 RGFGFVEYEEKEDAAAAIDNMHNAELFGRVLKVNYAQPMKIK 100
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F + G + DI +PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNV---SFRTTA-------DDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR++ V FA+
Sbjct: 67 EDEAQKAVDKLDGRTVDGRDIMVQFAK 93
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F + G + DI +PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNV---SFRTTA-------DDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR++ V FA+
Sbjct: 67 EDEAQKAVDKLDGRTVDGRDIMVQFAK 93
>gi|323448743|gb|EGB04638.1| hypothetical protein AURANDRAFT_32286 [Aureococcus anophagefferens]
Length = 252
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+ +RG FGQFG + ++ + R TG +G+GFV++ D AA A MD YLL G++L V
Sbjct: 79 DQMRGFFGQFGEVTNLRISRSKKTGNSKGYGFVEFADGDTAAVAAGTMDKYLLYGKQLVV 138
Query: 122 VFA 124
A
Sbjct: 139 HVA 141
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 43 RNLRHDSFSTKTYKSICRP----EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
R+ RH S +TK Y P +DL F ++GRL+++ + R+ FGFV++ D
Sbjct: 82 RHGRHGS-NTKLYVGQISPYTRTQDLEDIFRKYGRLRNVDMKRE--------FGFVEFTD 132
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKP------------------SEMRARERF 140
P DA DA++ +DG + G L V FA ++ P M
Sbjct: 133 PRDADDARHDLDGRIFDGSHLIVEFARGAQRGPGGVPLDGKGPSFPGRCYNCGMDGHWVR 192
Query: 141 RSRSYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRD-SRSISPRYRRYRERSYSR- 198
++ D R R H R S S +RGR RS SP + + R RSYSR
Sbjct: 193 DCKAGDWRDKCFRCGELGHIERNCKNS----SKDLKRGRSYLRSASPHHGKGRGRSYSRS 248
Query: 199 -SPYG----SRSYSPSRS----RSRSLDYSR 220
SPY RSYS S S R RS YSR
Sbjct: 249 LSPYLGRGRGRSYSRSPSHYHRRGRSWSYSR 279
>gi|332226186|ref|XP_003262269.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Nomascus
leucogenys]
Length = 1033
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L S KT + + E FG++GR+ +++L +D T + RGF F+
Sbjct: 5 DRPEKLFIGGL-----SLKTDEKALKAE-----FGKYGRIIEVFLMKDRETNKSRGFAFI 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
+ PADA A M+G L G+ + V A
Sbjct: 55 IFESPADANAAARDMNGKYLDGKAIKVALA 84
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + + L F +FGR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETSEKV-----LEAYFSKFGRISEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
Y +P DA DA M+G L G+ + V A
Sbjct: 55 TYENPGDAKDAAREMNGKPLDGKPIKVEQA 84
>gi|356517718|ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814914 [Glycine max]
Length = 273
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL F FGR+ + + +D +T RG FVQ++ DA DA MDG +L GR L
Sbjct: 78 DLHTLFSTFGRVARVTVLKDRHTRLSRGVAFVQFVSRHDAHDAAAQMDGKVLNGRTLAAS 137
Query: 123 FAEENRKKPSEMRAR 137
A +N + P +R R
Sbjct: 138 IAADNGRAPEFIRKR 152
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L ++ + K +++ FG++GR+ ++ L +D T + RGF F+
Sbjct: 5 DRPGKLFVGGLNIET-NEKALEAV---------FGKYGRIVEVLLMKDRETRKSRGFAFI 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
+ PADA DA M+G LL G+ + V A +
Sbjct: 55 TFESPADAKDAARDMNGKLLDGKSIKVEQATK 86
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 242 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 301
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 302 NWA--TRKPPAPKSTQEN 317
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 127 EDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 186
Query: 122 VFAEENRKKPS 132
+A RK P+
Sbjct: 187 NWA--TRKPPA 195
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 192 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 251
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 252 NWA--TRKPPAPKSTQEN 267
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR F FG L+ + L ++ TG RG+GFVQY DPA A DA M+G+ L GR + V
Sbjct: 240 DDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQYRDPAQARDALEKMNGFELAGRAIRV 299
>gi|425455329|ref|ZP_18835049.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9807]
gi|389803795|emb|CCI17308.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC 9807]
Length = 100
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
EDL+G F ++G + +YLP D TG+ RGFGFV+ + A A +DG +GR+
Sbjct: 12 VTKEDLQGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIETLDGAEWMGRQ 71
Query: 119 LTVVFAEENRKKPSE 133
+ V N+ +P E
Sbjct: 72 MKV-----NKARPRE 81
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+ L+ F FG + D + D TG RGFGFV ++D A A MDG L GR + V
Sbjct: 49 QSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRV 108
Query: 122 VFAEE 126
FA+E
Sbjct: 109 SFAQE 113
>gi|66816589|ref|XP_642304.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997199|sp|Q54Y98.1|TRA2_DICDI RecName: Full=Transformer-2 protein homolog
gi|60470367|gb|EAL68347.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 326
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL+ F +FG++ + L D TG + FGFV + + DA AK L G+ +
Sbjct: 128 DLKDEFSRFGKIDHVDLIMDRKTGRSKCFGFVYFENKEDAVRAKEECQDLQLHGKSIRTD 187
Query: 123 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYS 155
F+ KKP E + F + YD RRSPPR+S
Sbjct: 188 FSAT--KKPHEPTPGKYFGNPRYDSRRSPPRFS 218
>gi|357121197|ref|XP_003562307.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 166
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHAAFVPFGEVKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 191 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 250
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 251 NWA--TRKPPAPKSTQEN 266
>gi|294946599|ref|XP_002785125.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898581|gb|EER16921.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 114
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 47 HDSFSTKT--YKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
+D FS K R +DLR F +FG + D+++P D YTG RGFGFV++ + DA D
Sbjct: 7 NDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAED 66
Query: 105 AKYHMDGYLLLGRELTVVFAEENRK 129
A MD G TV A N++
Sbjct: 67 AIRDMDNKEFQGCRHTVAAAMYNKE 91
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 45/67 (67%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
++L+ F FG + ++ + RD YTG+ +GFGF+Q+ ++A +A M+G + GRE+ V
Sbjct: 263 QELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 322
Query: 122 VFAEENR 128
+A++++
Sbjct: 323 SYAQDSK 329
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 89 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 148
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 149 NWA--TRKPPAPKSTQEN 164
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 240 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 299
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 300 NWA--TRKPPAPKSTQEN 315
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAQDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYT-GEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
DL+ F FG L+ + L RD G +G+GFVQ++DP+ A +A M+G+ L GR++ V
Sbjct: 290 DLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMNGFELAGRQIRV 349
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 117 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 177 NWA--TRKPPAPKSTQEN 192
>gi|167517919|ref|XP_001743300.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778399|gb|EDQ92014.1| predicted protein [Monosiga brevicollis MX1]
Length = 77
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
R EDLR F +FG +KD+YLP D + PRGFGFV + + A DA ++ +GR
Sbjct: 1 TRSEDLREEFSKFGPIKDVYLPVDRESQRPRGFGFVTFEEQRSADDAIAQLNEQDFMGRR 60
Query: 119 LTVVF 123
+ V F
Sbjct: 61 IQVNF 65
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 127 EDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 186
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 187 NWA--TRKPPAPKSTQEN 202
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL+ F FG++ D + +D T + +G+GFV +++ DA +A M+G L GR +
Sbjct: 117 DLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTN 176
Query: 123 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYS 165
+A +KP R E + SYD + Y+ + Y G +
Sbjct: 177 WA---TRKPPPPRQPETTKQLSYDDVCNSSSYTNTTVYIGGVT 216
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 67 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 124
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED+R F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 110 EDVRAAFTPFGKISDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRT 169
Query: 122 VFAEENRKKPS 132
+A RK P+
Sbjct: 170 NWA--TRKPPA 178
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 131 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 190
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 191 NWA--TRKPPAPKSTQEN 206
>gi|384245985|gb|EIE19477.1| hypothetical protein COCSUDRAFT_67908 [Coccomyxa subellipsoidea
C-169]
Length = 164
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 29 YGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEP 88
GG+G + T+L V L + ++I L F FG +KD+ +P D TG+
Sbjct: 8 VGGKGTNKKTTLYVGGLEEN-----VNEAI-----LHSAFIPFGDIKDVNIPLDNTTGKH 57
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAE 125
RGFGFV+Y + D+ADA +M L GR L +A+
Sbjct: 58 RGFGFVEYENAEDSADAIDNMHNAELYGRVLRCNYAQ 94
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 89 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 148
Query: 122 VFAEENRKKPSEMRARE 138
+A RK P+ +E
Sbjct: 149 NWA--TRKPPAPKSTQE 163
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ D+++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG ++ GRE+ V FA+
Sbjct: 67 AEEAQKAVDRLDGRVVDGREIMVQFAK 93
>gi|332870655|ref|XP_003319032.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 2 [Pan troglodytes]
Length = 460
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S DGRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 117 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 177 NWA--TRKPPAPKSTQEN 192
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 117 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 177 NWA--TRKPPAPKSTQEN 192
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 72 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 131
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 132 NWA--TRKPPAPKSTQEN 147
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 127 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 186
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 187 NWA--TRKPPAPKSTQEN 202
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYT-GEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
DL+ F FG L+ + L RD G +G+GFVQ++DP+ A +A M+G+ L GR++ V
Sbjct: 293 DLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMNGFELAGRQIRV 352
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E+LR FGQFG + D+Y+ D TG PRGF FV +A A ++G L GR+LTV
Sbjct: 18 EELRSAFGQFGSVTDVYVAMDKMTGRPRGFAFVTMGTAEEAKAAAEKLNGTDLGGRQLTV 77
Query: 122 VFAEENRKKPSEMR 135
N +P E R
Sbjct: 78 -----NEARPKEER 86
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 14/92 (15%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D SL V NL TY++ PEDLR F + G + DIY+PRD YT E RGF FV
Sbjct: 11 DGMVSLKVDNL--------TYRTT--PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 60
Query: 95 QYIDPADA--ADAKYHMDGYLLLGRELTVVFA 124
++ + DA A MDG +L GREL V A
Sbjct: 61 RFFERRDAEEALDT--MDGRMLDGRELRVQMA 90
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 117 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 176
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 177 NWA--TRKPPAPKSTQEN 192
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 127 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 186
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 187 NWA--TRKPPAPKSTQEN 202
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 128 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 187
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 188 NWA--TRKPPAPKSTQEN 203
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 102 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 161
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 162 NWA--TRKPPAPKSTQEN 177
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 72 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 131
Query: 122 VFAEENRKKPSEMRARE 138
+A RK P+ +E
Sbjct: 132 NWA--TRKPPAPKTTQE 146
>gi|332870653|ref|XP_003319031.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
Length = 497
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S DGRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLDGKAIKV----EQAKKPS-------FQS---DGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ +F T +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI---TFRTSA-------DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V A+
Sbjct: 67 SDEAQKAIERLDGRAVDGRNIVVQSAK 93
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 165 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 224
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 225 NWA--TRKPPAPKSTQEN 240
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 121 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 180
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 181 NWA--TRKPPAPKSTQEN 196
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ +I L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEILLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ +F T +DL F ++G++ DI++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---TFRTSA-------DDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ +I L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEILLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ +I L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEILLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|406929348|gb|EKD64949.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 106
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E L FG G+++ + + +D YTG RGFGFV+ ++ DA A ++GY L GR + V
Sbjct: 17 EALEQLFGSVGQVQSVNIIKDRYTGNSRGFGFVEMVNDEDAKKAIEKLNGYNLEGRNIVV 76
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 128 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 187
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 188 NWA--TRKPPAPKSTQEN 203
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 110 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 169
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 170 NWA--TRKPPAPKSTQEN 185
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 89 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 146
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 128 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 187
Query: 122 VFAEENRKKPSEMRARE 138
+A RK P+ +E
Sbjct: 188 NWA--TRKPPAPKSTQE 202
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNE-----KGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKSIKV----EQATKPS 88
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 72 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 131
Query: 122 VFAEENRKKPSEMRARE 138
+A RK P+ +E
Sbjct: 132 NWA--TRKPPAPKSTQE 146
>gi|325186227|emb|CCA20728.1| peptidylprolyl cistrans isomerase E putative [Albugo laibachii
Nc14]
Length = 138
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +K+I +P D G RGFGFV+Y + DA DA +MD + G+ L V
Sbjct: 24 LHAAFVPFGPIKEIQIPSDTEVGASRGFGFVEYEEEDDANDAMDNMDESEMFGQTLRVCV 83
Query: 124 AEENRKK 130
A+ NR +
Sbjct: 84 AKANRAE 90
>gi|159164100|pdb|2DH7|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Nucleolysin Tiar
Length = 105
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR+
Sbjct: 27 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 86
Query: 119 LTVVFAEENRKKPS 132
+ +A RK P+
Sbjct: 87 IRTNWA--TRKPPA 98
>gi|323447129|gb|EGB03077.1| hypothetical protein AURANDRAFT_16576 [Aureococcus anophagefferens]
Length = 97
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+ +RG FGQFG + ++ + R TG +G+GFV++ D AA A MD YLL G++L V
Sbjct: 19 DQMRGFFGQFGEVTNLRISRSKKTGNSKGYGFVEFADGDTAAVAAGTMDKYLLYGKQLVV 78
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 164 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 223
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 224 NWA--TRKPPAPKSTQEN 239
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 129 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 188
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 189 NWA--TRKPPAPKSTQEN 204
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 111 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 170
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 171 NWA--TRKPPAPKSTQEN 186
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 79 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 136
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 127 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 186
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 187 NWA--TRKPPAPKSTQEN 202
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 124 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 183
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 184 NWA--TRKPPAPKSTQEN 199
>gi|45872602|gb|AAH68194.1| Tial1 protein [Mus musculus]
Length = 269
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 5 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 64
Query: 122 VFAEENRKKPSEMRARE 138
+A RK P+ +E
Sbjct: 65 NWA--TRKPPAPKSTQE 79
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 100 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 157
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 46 RHDSFSTKTYKSI------CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
RHD T SI C+P ++R F +G LK + LP TG RGFGFV+Y+
Sbjct: 754 RHDKGFVSTKISIKNIAFECKPIEIRKLFTTYGELKSVRLPSKP-TGGHRGFGFVEYLTE 812
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENR 128
+A +A + L GR L + FAEE++
Sbjct: 813 QEAKNAMEALQNSHLYGRHLILSFAEEDK 841
Score = 40.0 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
L +RNL S++T +D++ F G+L ++Y+P D + + +G FV ++ P
Sbjct: 326 LFIRNL---SYTTTE-------DDIKKFFEAHGKLSEVYIPIDRDSKKSKGIAFVLFMIP 375
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM 134
A A +DG L GR + ++ A+ K ++
Sbjct: 376 EQAMRAANDLDGKTLQGRIIHILAAKNAPSKEVQL 410
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 122 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 181
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 182 NWA--TRKPPAPKSTQEN 197
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
PT L V NL D +DLR F FG ++ I L D TG +GF FVQY
Sbjct: 270 PTRLYVGNLHTD----------LAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQY 319
Query: 97 IDPADAADAKYHMDGYLLLGRELTV 121
P DA A H +G L GR+L V
Sbjct: 320 KSPEDAKKALQHCNGMELAGRQLKV 344
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF--AE 125
FG+ G++ DI L D + + +GFG+++Y+D + A + ++G G+ + V AE
Sbjct: 189 FGKAGKVHDIRLITDRNSRKSKGFGYIEYLDKSSVPLALHQLNGTQCKGQTVLVQITQAE 248
Query: 126 ENR 128
+NR
Sbjct: 249 KNR 251
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 111 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 170
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 171 NWA--TRKPPAPKSTQEN 186
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 6 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 55
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 56 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 89
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYT-GEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
DL+ F +G L+ + L RD G +G+GFVQ++DP A DA M+G+ L GR++ V
Sbjct: 295 DLQEIFEPYGELEQVILQRDELNPGRSKGYGFVQFVDPTHAKDALAEMNGFELAGRQIRV 354
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S+ V NL +D +DL F ++G +K + LP D TG PRGFGFV+
Sbjct: 2 SIYVGNLSYD----------VTEQDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEMDT 51
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSE 133
A+ A +DG +GR+L V N+ KP E
Sbjct: 52 DAEETAAIEALDGAEWMGRDLKV-----NKAKPRE 81
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|410060051|ref|XP_003949287.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
A1-like [Pan troglodytes]
Length = 184
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L+ FG+ G + ++ L +D T + RGF F+ + +PADA +A M+G L G+ + V
Sbjct: 24 LKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKV-- 80
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
E KKPS F+S DGRR PP SR+
Sbjct: 81 --EQAKKPS-------FQS---DGRRRPPASSRN 102
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|30017481|gb|AAP12903.1| putative peptidyl-prolyl cis-trans isomerase [Oryza sativa Japonica
Group]
gi|108709685|gb|ABF97480.1| Peptidyl-prolyl cis-trans isomerase E, putative, expressed [Oryza
sativa Japonica Group]
gi|125544766|gb|EAY90905.1| hypothetical protein OsI_12520 [Oryza sativa Indica Group]
gi|125587046|gb|EAZ27710.1| hypothetical protein OsJ_11659 [Oryza sativa Japonica Group]
Length = 171
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHAAFVPFGEIKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 111 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 170
Query: 122 VFAEENRKKPSEMRARE 138
+A RK P+ +E
Sbjct: 171 NWA--TRKPPAPKSTQE 185
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
D+ F FG++ + + +D +T + RG FV Y+ DAA A MD +L GR+LTV
Sbjct: 72 DIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKLTVS 131
Query: 123 FAEENRKKPSEMRARERFRSRSY 145
A +N RA E + R Y
Sbjct: 132 IAADNG------RASEFIKKRVY 148
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAVDRLDGRNVDGRNIMVQFAK 93
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|427714396|ref|YP_007063020.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
gi|427378525|gb|AFY62477.1| RRM domain-containing RNA-binding protein [Synechococcus sp. PCC
6312]
Length = 91
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
EDL F ++G +K +YLP D TG RGFGFV+ A+ A +DG +GR+L V
Sbjct: 15 EDLEAVFAEYGSVKQVYLPVDRDTGRKRGFGFVEMSTDAEEDAAIAELDGAEWMGRQLKV 74
Query: 122 VFAEENRKKPSE 133
N+ +P E
Sbjct: 75 -----NKARPRE 81
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 72 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQI 129
>gi|428304645|ref|YP_007141470.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246180|gb|AFZ11960.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 103
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+DL F ++G +K + LP D TG RGFGFV+ A+ A +DG +GR+
Sbjct: 12 VTQDDLSQAFAEYGTVKSVQLPTDRETGRMRGFGFVEMSSDAEETAAIDALDGAEWMGRD 71
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYD-GRRSPPRY 154
L V N+ KP E R +D RRS RY
Sbjct: 72 LKV-----NKAKPREDRRPSGGGGGGWDNNRRSSSRY 103
>gi|119578959|gb|EAW58555.1| hCG2010950 [Homo sapiens]
Length = 256
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D+ T + GF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLVKDHETNKSGGFAFVTFESPADAKDAARDMNGKSLDGKAIEV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQANKPS 88
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 112 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 171
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 172 NWA--TRKPPAPKSTQEN 187
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 174 DRPGKLFIGGLNTET-NEKALEAV---------FGKYGRIVEVLLMKDRETNKSRGFAFV 223
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 224 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 257
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 111 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 170
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 171 NWA--TRKPPAPKSTQEN 186
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
EDL F ++G + +YLP D TG RGFGFV+ + + A +DG +GRE
Sbjct: 12 VTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIETLDGAEWMGRE 71
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGY 164
L V N+ +P +E +R+Y G RS + AR Y
Sbjct: 72 LRV-----NKARP-----KENNNNRNYSGGN-----RRSNNLARNY 102
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|443312655|ref|ZP_21042271.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442777374|gb|ELR87651.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 96
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
EDLR F ++G +K I LP D TG RGF FV + A A +DG +GR+L
Sbjct: 14 EEDLRTVFAEYGAIKRIVLPTDRETGRLRGFAFVDMNEDAQEDTAITELDGAEWMGRQLR 73
Query: 121 VVFAEENRKKPSEMRARE 138
V N+ KP E RE
Sbjct: 74 V-----NKAKPKEDNRRE 86
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 75/152 (49%), Gaps = 27/152 (17%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++++ L RDY F++Y DP DA +A+Y++DG + G +
Sbjct: 23 RSRDLEYLFSKYGRIREVELKRDYA--------FIEYSDPRDADEARYNLDGRDVDGSRI 74
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSP 173
V FA+ R R R Y GR PP R H+AR ++ D+ +
Sbjct: 75 IVEFAK------GVPRGSGGSREREYVGRGPPPGTGRCFNCGIDGHWAR-DCKAGDWKNK 127
Query: 174 PPR---RGRDSRSI--SPRYRRYRERSYSRSP 200
R RG R+ SPR R RERSYSRSP
Sbjct: 128 CYRCGERGHIERNCQNSPRSLR-RERSYSRSP 158
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 6 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 55
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 56 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 89
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 52 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 101
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 102 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 135
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +S+ FG++GR+ ++ L +D T + RGF F+
Sbjct: 5 DRPGKLFIGGLNTET-NEKGLESV---------FGKYGRIVEVLLMKDRETNKSRGFAFI 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKSIKV----EQATKPS 88
>gi|326522080|dbj|BAK04168.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 54 LHAAFVPFGEVKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 113
Query: 124 A 124
A
Sbjct: 114 A 114
>gi|119608862|gb|EAW88456.1| RNA binding motif protein, X-linked, isoform CRA_b [Homo sapiens]
Length = 221
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 213 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 272
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 273 NWA--TRKPPAPKSTQEN 288
>gi|226088567|dbj|BAH37028.1| RNA binding motif protein [Tokudaia osimensis]
Length = 279
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 14 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 71
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 72 --EQATKPS 78
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
EDLR F ++G + D+Y+PRD YT E RGF FV+Y +A A MDG + GRE+ V
Sbjct: 29 EDLRRVFSRYGEVGDVYIPRDPYTFESRGFAFVRYPTDREADSAIREMDGRRIDGREIRV 88
Query: 122 VFAEENRKKPSEMR 135
A+ R MR
Sbjct: 89 QRAKYGRPNSRRMR 102
>gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio]
Length = 277
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + + L F +FGR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETSEKV-----LEAYFSKFGRISEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
Y +P+DA DA M+G L G+ + V A
Sbjct: 55 TYENPSDAKDAAREMNGKPLDGKPIKVEQA 84
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 81/167 (48%), Gaps = 38/167 (22%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++D+ + RDY FV++ DP DA DA+YH+DG L G +
Sbjct: 23 RSRDLEYLFSKYGRVRDVDMKRDY--------AFVEFSDPRDADDARYHLDGKDLDGSRI 74
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSP 173
V FA+ + SR Y GR PP R H+AR ++ D+ +
Sbjct: 75 IVEFAKGVPRG-----------SREYLGRGPPPGSGRCFNCGIDGHWARD-CKAGDWKNK 122
Query: 174 PPR---RGRDSRSI--SPRYRRYRERSYSRSPYGSRSYSPSRSRSRS 215
R RG R+ SP+ + R RSYSRSP SP R RSRS
Sbjct: 123 CYRCGERGHIERNCKNSPK-KLKRGRSYSRSP------SPRRGRSRS 162
>gi|219363055|ref|NP_001136648.1| uncharacterized protein LOC100216777 [Zea mays]
gi|194696500|gb|ACF82334.1| unknown [Zea mays]
gi|195636542|gb|ACG37739.1| nucleic acid-binding/nucleotide-binding protein [Zea mays]
gi|195646368|gb|ACG42652.1| peptidyl-prolyl cis-trans isomerase E [Zea mays]
gi|413933690|gb|AFW68241.1| peptidyl-prolyl cis-trans isomerase E [Zea mays]
Length = 165
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHAAFVPFGEVKDVKTPLDQSTQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
+LR F FG + + L RD +TG+P+GF F++Y ++A +A MDG+ + GR + V
Sbjct: 237 ELRQLFVPFGEILSVELHRDPFTGKPKGFAFIEYKRASEAREAMLAMDGFEISGRNIKVN 296
Query: 123 FAEENR 128
+NR
Sbjct: 297 LTSDNR 302
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 72 GRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF--AEENR- 128
G+++DI L RD TG P+G +V++ D+ M G+ LL + + V AE+NR
Sbjct: 145 GKIRDIQLVRDQRTGRPKGVAYVEFY-TNDSVIKALSMSGHFLLNQPIRVTASQAEKNRA 203
Query: 129 -KKPSEMRARE 138
K E + E
Sbjct: 204 AKASKEFQTNE 214
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
EDL+ F ++G++ + LP D TG PRGF FV+ A A +DG +GR+
Sbjct: 12 VTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIEALDGAEWMGRD 71
Query: 119 LTVVFAEENRKKPSEMRA 136
L V N+ KP E R+
Sbjct: 72 LKV-----NKAKPREERS 84
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+D+R F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 110 DDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 169
Query: 122 VFAEENRKKPS 132
+A RK P+
Sbjct: 170 NWA--TRKPPA 178
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTET-NEKALETV---------FGKYGRIVEVLLIKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
++VRNL + +C PED+ F FG + ++++P D T + +G+ F+ Y+ P
Sbjct: 341 IMVRNLTY----------LCSPEDIEELFKPFGPISEVHIPIDRETKKSKGYAFIMYLMP 390
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSE 133
+A +A +D + GR + +V A+E K E
Sbjct: 391 ENAVNAYTTLDNTIFQGRIMQIVPAKERPKAADE 424
Score = 37.7 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
T L+VRN+ ++ +D++ F F ++K + +P Y G+ RGF FV ++
Sbjct: 761 TKLVVRNVPFEA----------SKKDIKELFSSFAQVKSVRIPTKY-DGQHRGFAFVDFL 809
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEEN 127
+A A + L GR L + +A+++
Sbjct: 810 TKQEAKTAYDTLGATHLYGRHLVLEWAQDD 839
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Anolis carolinensis]
Length = 384
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
+ PADA DA M+G L G+ + V A +
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L F ++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETTEKA-----LEQYFSKYGRIVEVILMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTV------VFAEENRKKPSEMRARERFRSR----- 143
+ PADA DA M+G L G+ + V F R+ P +R R R
Sbjct: 55 TFESPADAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPPSNYSRSRGPPRGPRGS 114
Query: 144 --SYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISP 186
G R PPR S P + SR P PP +RG R+ P
Sbjct: 115 RGGPSGMRGPPRGSGDPFFKGMSSRGP----PPLKRGPPLRNGGP 155
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTET-NEKALETV---------FGKYGRIVEVLLIKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTET-NEKALETV---------FGKYGRIVEVLLIKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTET-NEKALETV---------FGKYGRIVEVLLIKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+D+R F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 110 DDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 169
Query: 122 VFAEENRKKPS 132
+A RK P+
Sbjct: 170 NWA--TRKPPA 178
>gi|198424500|ref|XP_002131886.1| PREDICTED: similar to Transformer-2 protein homolog (TRA-2 alpha)
[Ciona intestinalis]
Length = 283
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DLR F ++GR+ DI + D TG RGFGFV + + DAA+AK +G L GR + V
Sbjct: 124 DLRSVFSRYGRITDINVVIDQKTGRSRGFGFVYFDNDDDAAEAKERANGMELDGRNIRVD 183
Query: 123 FAEENR 128
++ R
Sbjct: 184 YSITKR 189
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FGR+ D + +D TG+ +G+GFV + + DA +A M G L GR++
Sbjct: 109 EDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT 168
Query: 122 VFAEENRKKPSEMRARERFRSRS 144
+A RK P+ + F SRS
Sbjct: 169 NWA--TRKPPAP---KSTFESRS 186
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 122 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 181
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 182 NWA--TRKPPAPKSTQEN 197
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF F+
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFI 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG++ D + +D TG+ +G+GFV + + DA +A HM G L GR++
Sbjct: 112 EDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRT 171
Query: 122 VFAEENRKKPSEMRARER 139
+A RK P+ +E
Sbjct: 172 NWA--TRKPPAPKSTQEN 187
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DL G FG +G++ D +LP + TG PRGF FV + PA+A A +DG + GR L V
Sbjct: 16 QDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAIADLDGKEIDGRALRV 75
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTET-NEKALETV---------FGKYGRIVEVLLIKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFVGGLNIET-NEKALEAV---------FGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
+ PADA DA M+G L G+ + V A +
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKSIKVEQATK 86
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
+ PADA DA M+G L G+ + V A +
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|444730998|gb|ELW71366.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Tupaia chinensis]
Length = 194
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L+ ++ + K ++I FG++GR+ ++ L +D+ + RGF FV
Sbjct: 5 DHPGKLFIGELKTET-NEKALEAI---------FGKYGRIVEVLLMKDHEINKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTET-NEKALETV---------FGKYGRIVEVLLIKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Macaca mulatta]
Length = 391
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTET-NEKALETV---------FGKYGRIVEVLLIKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|242033729|ref|XP_002464259.1| hypothetical protein SORBIDRAFT_01g015060 [Sorghum bicolor]
gi|241918113|gb|EER91257.1| hypothetical protein SORBIDRAFT_01g015060 [Sorghum bicolor]
Length = 168
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHAAFVPFGEVKDVKTPLDQSTQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNY 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
++L+ F FG + D+ + RD YTG+ +GFGF+Q+ ++A +A M+G + GRE+ V
Sbjct: 603 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEALTVMNGMEVAGREIKV 662
Query: 122 VFAEENR 128
+A++++
Sbjct: 663 GYAQDSK 669
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K +++ FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTET-NEKALETV---------FGKYGRIVEVLLIKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|336257891|ref|XP_003343767.1| hypothetical protein SMAC_04425 [Sordaria macrospora k-hell]
gi|380091605|emb|CCC10737.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 344
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 9 SPSPPRDYGR---RYRSPSPRGHYGGRGRDLPTSLL-----VRNLRHDSFSTKTYKSICR 60
S SP RD G R RS SP G+ +D S RN + F T + +
Sbjct: 28 SASPRRDDGHDSSRRRSMSPNGNDRAPAKDEGQSKGGEEDGARNPGSNLFVTGIHPRLEE 87
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
E R F ++G ++ + +D +TGE RGFGFV+ + P A AK + G ++ GR L+
Sbjct: 88 AEVTR-LFEKYGEVEKCQIMKDPHTGESRGFGFVKMVTPEQAQAAKDGLQGEVIEGRTLS 146
Query: 121 VVFA 124
+ A
Sbjct: 147 IEMA 150
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Anolis carolinensis]
Length = 374
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
+ PADA DA M+G L G+ + V A +
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 53 KTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGY 112
K + + E+LR F +G + + RD TG RGFGFV + P +AA A M+G
Sbjct: 366 KNLDDLLQDEELREAFTNYGTITSARVMRDS-TGNSRGFGFVCFSTPEEAATAVAEMNGK 424
Query: 113 LLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSRSPDYYS 172
L+ G+ + V FA+ + +++ A+ R+ R P + P Y +P +Y+
Sbjct: 425 LITGKPVYVAFAQRKEVRRAQLEAQHAQRATGVLVNRGMP-MGQPPMYG-----APMFYA 478
Query: 173 PP---PRRGRDS 181
P P +GR +
Sbjct: 479 QPNQMPMQGRQA 490
>gi|355687312|gb|EHH25896.1| hypothetical protein EGK_15753, partial [Macaca mulatta]
Length = 148
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 20/107 (18%)
Query: 36 LPTS----LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 91
LP S L +RN ++S R +DL FG++ + D+Y+P D+YT PRG
Sbjct: 2 LPVSPKVPLFIRNGANNS----------RFKDLWHEFGRYDPIVDVYVPLDFYTHCPRGV 51
Query: 92 GFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
+VQ D DA DA ++D + G ++ + + P++M+A+E
Sbjct: 52 AYVQLEDVRDAEDALPNLDRKWICGCQMRI------GRPPNQMKAKE 92
>gi|225433902|ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera]
gi|297743796|emb|CBI36679.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 24 LHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAAAAMDNMDGAELYGRVLTVNY 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|358393829|gb|EHK43230.1| hypothetical protein TRIATDRAFT_146202 [Trichoderma atroviride IMI
206040]
Length = 297
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 20 YRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYL 79
Y P+ RG GG G + S + + +LR F +FGR+ ++L
Sbjct: 189 YVPPALRGDRGGAGERMGGSKFGERDDFATLRVTNVSEMAEESELRDMFERFGRVTRVFL 248
Query: 80 PRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
+D TG +GF F+ + D +DA A MDG+ L V FA++
Sbjct: 249 AKDRETGMAKGFAFISFADHSDAVTACNKMDGFGFKHLILRVEFAKK 295
>gi|26342521|dbj|BAC25110.1| unnamed protein product [Mus musculus]
Length = 69
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQY
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQY 58
>gi|426397155|ref|XP_004064791.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 isoform 2
[Gorilla gorilla gorilla]
Length = 413
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L + KT + + E FG++G + ++L +D T + RGF FV
Sbjct: 5 DHPEKLFVGGL-----NLKTDEKALKAE-----FGKYGHIIKVFLMKDRKTNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR-------ARERFRSRSYDG 147
+ PADA A M+G L G+ + V A + K S +R RF R+ G
Sbjct: 55 TFESPADAKAAARDMNGKYLDGKAIMVAQAIKPAFKSSRWVPPTPGSGSRSRFSHRTRWG 114
Query: 148 RRSP--PRYSRSPHYARGYSRSPDYY---SPPPRR 177
SP P P+ RGY+ D + +P PR+
Sbjct: 115 GSSPQRPPSQGGPNDGRGYAGYFDLWPYRAPMPRK 149
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 10/72 (13%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAKYHM 109
D DA DA M
Sbjct: 64 DKRDAEDAMDAM 75
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
D+ F FG++ + + +D +T + RG FV Y+ DAA A MD +L GR+LTV
Sbjct: 72 DIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKLTVS 131
Query: 123 FAEENRKKPSEMRARERFRSRSY 145
A +N RA E + R Y
Sbjct: 132 IAADNG------RASEFIKKRVY 148
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR FGQ G + ++ + D+ TG+ RG+GFV+++ AA A+ M+G +L GR + V +
Sbjct: 74 LRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAAARKEMNGQILDGRRIRVSY 133
Query: 124 AEE 126
A +
Sbjct: 134 AHK 136
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ +I L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEILLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA D M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDVARDMNGKSLDGKAIKV----EQATKPS 88
>gi|47939492|gb|AAH71575.1| FUSIP1 protein [Homo sapiens]
Length = 69
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 10/59 (16%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQY 96
TSL VRN+ D+ R EDLR FG++G + D+Y+P D+YT PRGF +VQY
Sbjct: 10 TSLFVRNVADDT----------RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQY 58
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 77 IYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
+Y+PRD YT E RGF FV++ D DA DA MDG +L GREL V A
Sbjct: 30 VYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 77
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED++ F FG +K + L +D T +GF FV+Y P A A HM+G++L GR+L V
Sbjct: 265 EDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKHMNGFMLAGRQLKV 324
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+D++ F FG +K L + TG+ +G+GFV+Y + A +A M+G+ L GR + V
Sbjct: 425 DDIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQMNGWDLGGRPIKV 484
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L F ++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETTEKA-----LEQYFSKYGRIVEVILMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ PADA DA M+G L G+ + V E KP A R +Y R PPR
Sbjct: 55 TFESPADAKDAAREMNGKSLDGKPIKV----EQATKPQFESAGRRGPPSNYSRSRGPPRG 110
Query: 155 SRSPHYARGYSRSP--DYYSPP 174
R R P DYY P
Sbjct: 111 PRGSRGGPSGMRGPPRDYYDSP 132
>gi|390480268|ref|XP_002763353.2| PREDICTED: RNA-binding motif protein, X chromosome-like [Callithrix
jacchus]
Length = 156
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
Length = 388
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ +I L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEILLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA D M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDVARDMNGKSLDGKAIKV----EQATKPS 88
>gi|402860841|ref|XP_003894827.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
Length = 391
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ ++ L +D + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEVLLMKDQKINKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA M+G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARDMNGKSLDGKAIKV----EQATKPS 88
>gi|16944647|emb|CAC28728.2| conserved hypothetical protein [Neurospora crassa]
Length = 343
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 9 SPSPPRDYGR---RYRSPSPRGHYGGRGRDLPTSLL-----VRNLRHDSFSTKTYKSICR 60
S SP RD G R RS SP G+ +D S RN + F T + +
Sbjct: 28 SASPRRDDGHDSSRRRSMSPNGNDRAPAKDEGQSKGGEEDGARNPGSNLFVTGIHPRLEE 87
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
E R F ++G ++ + +D +TGE RGFGFV+ + P A AK + G ++ GR L+
Sbjct: 88 AEVTR-LFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKEGLQGEVIEGRTLS 146
Query: 121 VVFA 124
+ A
Sbjct: 147 IEMA 150
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|336472231|gb|EGO60391.1| hypothetical protein NEUTE1DRAFT_107026 [Neurospora tetrasperma
FGSC 2508]
gi|350294548|gb|EGZ75633.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 343
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 9 SPSPPRDYGR---RYRSPSPRGHYGGRGRDLPTSLL-----VRNLRHDSFSTKTYKSICR 60
S SP RD G R RS SP G+ +D S RN + F T + +
Sbjct: 28 SASPRRDDGHDSSRRRSMSPNGNDRAPAKDEGQSKGGEEDGARNPGSNLFVTGIHPRLEE 87
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
E R F ++G ++ + +D +TGE RGFGFV+ + P A AK + G ++ GR L+
Sbjct: 88 AEVTR-LFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKEGLQGEVIEGRTLS 146
Query: 121 VVFA 124
+ A
Sbjct: 147 IEMA 150
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
Length = 101
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ T+++ +DL F ++G++ DI++PRD +GE RGF FV+Y
Sbjct: 17 SLLVLNI--------TFRTTA--DDLYPLFDRYGKVVDIFIPRDRRSGESRGFAFVRYKH 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRK 129
+A A +DG + GR++ V FA+ R
Sbjct: 67 VDEAQKAIDRLDGMTIDGRQIAVQFAKYGRN 97
>gi|426397153|ref|XP_004064790.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 isoform 1
[Gorilla gorilla gorilla]
Length = 412
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 22/155 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L + KT + + E FG++G + ++L +D T + RGF FV
Sbjct: 5 DHPEKLFVGGL-----NLKTDEKALKAE-----FGKYGHIIKVFLMKDRKTNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMR-------ARERFRSRSYDG 147
+ PADA A M+G L G+ + V A + K S +R RF R+ G
Sbjct: 55 TFESPADAKAAARDMNGKYLDGKAIMVAQAIKPAFKSSRWVPPTPGSGSRSRFSHRTRWG 114
Query: 148 RRSP--PRYSRSPHYARGYSRSPDYY---SPPPRR 177
SP P P+ RGY+ D + +P PR+
Sbjct: 115 GSSPQRPPSQGGPNDGRGYAGYFDLWPYRAPMPRK 149
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 45 LRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
L H + + SI P DLR FG FG L+ + L ++ G RG+GFV+Y DPA+A +
Sbjct: 310 LFHRLYVGNIHFSITEP-DLRTVFGPFGELRFVQLQKED-NGRSRGYGFVEYNDPANARE 367
Query: 105 AKYHMDGYLLLGRELTV 121
A M+G+ L GR + V
Sbjct: 368 ALEKMNGFDLAGRPIRV 384
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|4098580|gb|AAD00327.1| RBM1 [Macropus eugenii]
Length = 402
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DL FG++G + + L +D T + RGF FV + PA A DA M+G L G+ + V
Sbjct: 21 KDLESVFGKYGHIVKVLLMKDQETNKSRGFAFVTFESPAAAKDAARDMNGKALDGKSIKV 80
Query: 122 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
E KPS F S GRR PP RS
Sbjct: 81 ----EQANKPS-------FES----GRRGPPPAPRS 101
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ +F T +DL F ++G++ DI++PRD TG+ RGF F +Y
Sbjct: 17 SLLVLNI---TFRTSA-------DDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAVERLDGKNVDGRYIMVQFAK 93
>gi|81074820|gb|ABB55376.1| putative arginine/serine-rich protein-like [Solanum tuberosum]
Length = 392
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L+ FG FG + + L D+ P+GF +V++ DA A+ HMDG + G+ + F
Sbjct: 126 LKEIFGNFGEILHVQLAIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDGAQIDGKVVHARF 185
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSP 158
RKK A R+ + RR PR +P
Sbjct: 186 TLPERKK-----AASPPRAVATSSRRDAPRTDNAP 215
>gi|1666299|emb|CAA63557.1| RNA-binding protein [Anabaena variabilis]
Length = 102
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL+G F ++G +K + +P+D TG PRGF FV+ A+ A +DG +GR+L V
Sbjct: 16 DLKGVFAEYGTVKRVQVPQDRETGRPRGFAFVEMGTDAEEDAAIEGLDGAEWMGRDLKV- 74
Query: 123 FAEENRKKPSE 133
N+ KP E
Sbjct: 75 ----NKAKPKE 81
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 AEEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 14 RDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGR 73
R++ R+ + GR L +RNL + C ED++ F + G
Sbjct: 380 RNFSRKLKEDEEEEDVSESGR-----LFIRNLPY----------TCTEEDIKELFSKHGP 424
Query: 74 LKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKK 130
L D+ P D T P+GF FV Y+ P +A A +DG++ GR L ++ + ++K
Sbjct: 425 LSDVLFPIDTLTKRPKGFAFVTYMIPENAVTALAQLDGHIFQGRMLHLLPSTAKKEK 481
>gi|428313428|ref|YP_007124405.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428255040|gb|AFZ20999.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 93
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
EDL F ++G +K + +P D TG RGFGFV+ A+ A +DG +GR
Sbjct: 12 VTSEDLSSVFAEYGTVKRVQIPTDRETGRSRGFGFVEMETEAEEDAAIQELDGAEWMGRS 71
Query: 119 LTVVFAEENRKKPSEMRAR 137
L V N+ KP E + R
Sbjct: 72 LKV-----NKAKPREDQKR 85
>gi|391345479|ref|XP_003747013.1| PREDICTED: transformer-2 protein homolog beta-like [Metaseiulus
occidentalis]
Length = 242
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 17 GRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKD 76
G RY + H G R R P+ + F Y + +LR FG++GR++D
Sbjct: 63 GSRYDGDEGKRHAGDRERPHPSRCI------GVFGLSIYTN---ERELRDFFGKYGRVED 113
Query: 77 IYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENR 128
+ + D TG RGFGFV Y DA +AK +G + GR++ V F+ R
Sbjct: 114 VQVVYDAQTGRSRGFGFVYYESEDDAHEAKEKANGLEIDGRKIRVDFSITKR 165
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|56090533|ref|NP_001006120.2| RNA-binding motif protein, Y chromosome, family 1 member D [Homo
sapiens]
gi|190360153|sp|P0C7P1.1|RBY1D_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member D
Length = 496
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S GRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|85099136|ref|XP_960722.1| hypothetical protein NCU04164 [Neurospora crassa OR74A]
gi|28922241|gb|EAA31486.1| predicted protein [Neurospora crassa OR74A]
Length = 396
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 9 SPSPPRDYGR---RYRSPSPRGHYGGRGRDLPTSLL-----VRNLRHDSFSTKTYKSICR 60
S SP RD G R RS SP G+ +D S RN + F T + +
Sbjct: 28 SASPRRDDGHDSSRRRSMSPNGNDRAPAKDEGQSKGGEEDGARNPGSNLFVTGIHPRLEE 87
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
E R F ++G ++ + +D +TGE RGFGFV+ + P A AK + G ++ GR L+
Sbjct: 88 AEVTR-LFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKEGLQGEVIEGRTLS 146
Query: 121 VVFA 124
+ A
Sbjct: 147 IEMA 150
>gi|47124558|gb|AAH70298.1| RBMY1A1 protein [Homo sapiens]
gi|312151036|gb|ADQ32030.1| RNA binding motif protein, Y-linked, family 1, member A1 [synthetic
construct]
Length = 459
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S GRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|60416093|gb|AAH90711.1| Rbm19 protein, partial [Danio rerio]
Length = 802
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C EDL+ F + G L ++ P D T +P+GF FV Y+ P +A A +DG+ GR
Sbjct: 410 CTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQLDGHTFQGRV 469
Query: 119 LTVVFAEENRKKPSE 133
L V+ + ++K +
Sbjct: 470 LHVMASRLKKEKADQ 484
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|56090527|ref|NP_001006118.2| RNA-binding motif protein, Y chromosome, family 1 member E [Homo
sapiens]
gi|190360154|sp|A6NEQ0.1|RBY1E_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member E
gi|182888281|gb|AAI60023.1| RNA binding motif protein, Y-linked, family 1, member E [synthetic
construct]
Length = 496
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S GRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|54633344|ref|NP_001006121.1| RNA-binding motif protein, Y chromosome, family 1 member B [Homo
sapiens]
gi|190360159|sp|A6NDE4.2|RBY1B_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B
Length = 496
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S GRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|219519661|gb|AAI44460.1| Unknown (protein for MGC:178002) [Homo sapiens]
gi|223460910|gb|AAI36863.1| RBMY1D protein [Homo sapiens]
Length = 459
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S GRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|4826974|ref|NP_005049.1| RNA-binding motif protein, Y chromosome, family 1 member A1 [Homo
sapiens]
gi|378522864|sp|P0DJD3.1|RBY1A_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member A1; AltName: Full=RNA-binding motif protein 1;
AltName: Full=RNA-binding motif protein 2; AltName:
Full=Y chromosome RNA recognition motif 1; Short=hRBMY
gi|452367|emb|CAA53659.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S GRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C EDL+ F + G L ++ P D T +P+GF FV Y+ P +A A +DG+ GR
Sbjct: 409 CTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQLDGHTFQGRV 468
Query: 119 LTVVFAEENRKKPSE 133
L V+ + ++K +
Sbjct: 469 LHVMASRLKKEKADQ 483
Score = 37.4 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM-DGYLLLGRELT 120
++LR F FG LK + LP+ G RGFGF+ ++ DA A + L GR L
Sbjct: 818 KELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRLV 877
Query: 121 VVFAE 125
+ +A+
Sbjct: 878 LEWAD 882
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|2625130|gb|AAB86639.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
Length = 388
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L FG++GR+ +I L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETNEKA-----LEAVFGKYGRIVEIILMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
PADA DA M+G L G+ + V A +
Sbjct: 55 TLESPADAKDAARDMNGKSLDGKAIKVEQATK 86
>gi|229485954|sp|P0C8Z4.1|RMXL3_PANTR RecName: Full=RNA-binding motif protein, X-linked-like-3
Length = 992
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L + KT + + E FG++G + ++L +D T + RGF FV
Sbjct: 5 DRPEKLFVGGL-----NLKTDEKALKAE-----FGKYGHIIKVFLIKDRKTNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA-----EENRKKPSE--MRARERFRSRSYDG 147
+ PADA A M+G L G+ + V E +R P +R RF R+ G
Sbjct: 55 TFESPADAKAAARDMNGKYLDGKAIMVAQTIKPAFESSRWVPPTPGSGSRSRFSHRTRGG 114
Query: 148 RRSPPR 153
SP R
Sbjct: 115 GSSPQR 120
>gi|392347178|ref|XP_003749751.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 446
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ +I L +D T + RGF FV + PADA D M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 AEEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|82400144|gb|ABB72811.1| putative arginine/serine-rich protein [Solanum tuberosum]
Length = 392
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L+ FG FG + + L D+ P+GF +V++ DA A+ HMDG + G+ + F
Sbjct: 126 LKEIFGNFGEILHVQLAIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDGAQIDGKVVHARF 185
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSP 158
RKK A R+ + RR PR +P
Sbjct: 186 TLPERKK-----AASPPRAVATSSRRDAPRTDNAP 215
>gi|223461509|gb|AAI40759.1| Unknown (protein for MGC:176435) [Homo sapiens]
Length = 459
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E KKPS F+S GRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLHGKAIKV----EQAKKPS-------FQS---GGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L F ++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETTEKA-----LEQFFSKYGRIAEVILMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTV------VFAEENRKKPSEMRARER 139
+ P+DA DA M+G L G+ + V F R+ P M +R R
Sbjct: 55 TFESPSDAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSR 105
>gi|196000460|ref|XP_002110098.1| hypothetical protein TRIADDRAFT_17694 [Trichoplax adhaerens]
gi|190588222|gb|EDV28264.1| hypothetical protein TRIADDRAFT_17694, partial [Trichoplax
adhaerens]
Length = 89
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V N+ TY++ +DL+ F ++G + D+Y+PRD GE RG+ FV+Y
Sbjct: 7 TSLKVDNI--------TYRTTV--DDLKRIFDKYGEIGDVYIPRDR-RGESRGYAFVRYH 55
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA 124
D DA DA + G GREL VV A
Sbjct: 56 DRRDAEDAMDCVHGKNFDGRELRVVMA 82
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C EDL+ F + G L ++ P D T +P+GF FV Y+ P +A A +DG+ GR
Sbjct: 410 CTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQLDGHTFQGRV 469
Query: 119 LTVVFAEENRKKPSE 133
L V+ + ++K +
Sbjct: 470 LHVMASRLKKEKADQ 484
Score = 37.7 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM-DGYLLLGRELT 120
++LR F FG LK + LP+ G RGFGF+ ++ DA A + L GR L
Sbjct: 819 KELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRLV 878
Query: 121 VVFAE 125
+ +A+
Sbjct: 879 LEWAD 883
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ +F T +DL F ++G++ DI++PRD TG+ RGF FV+Y
Sbjct: 9 SLLVLNI---TFRTSA-------DDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKH 58
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+A A +DG + GR + V FA+ R S
Sbjct: 59 ADEAQKAIERLDGKNVDGRNIVVQFAKYGRNDES 92
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L F ++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETTEKA-----LEQFFSKYGRIAEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTV------VFAEENRKKPSEMRARER 139
+ P+DA DA M+G L G+ + V F R+ P M +R R
Sbjct: 55 TFESPSDAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSR 105
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L F ++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETTEKA-----LEQFFSKYGRIAEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTV------VFAEENRKKPSEMRARER 139
+ P+DA DA M+G L G+ + V F R+ P M +R R
Sbjct: 55 TFESPSDAKDAAREMNGKSLDGKNIKVEQATKPQFESGGRRGPPPMHSRSR 105
>gi|297833586|ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
gi|297330515|gb|EFH60934.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+ L+ F FG + ++ + D +G RGFGFV + + DA AK MDG LLGR L +
Sbjct: 54 QSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRI 113
Query: 122 VFAEE 126
FA E
Sbjct: 114 SFALE 118
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ +I L +D T + RGF FV + PADA D M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|434398406|ref|YP_007132410.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428269503|gb|AFZ35444.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 106
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
EDL F ++G++K +YLP D TG+ RGFGFV+ A A +DG +GRE
Sbjct: 12 VTQEDLNEVFAEYGKVKKVYLPTDRETGKMRGFGFVEMETEAAETAAIEALDGAEWMGRE 71
Query: 119 LTV 121
L V
Sbjct: 72 LKV 74
>gi|358384661|gb|EHK22258.1| hypothetical protein TRIVIDRAFT_71507 [Trichoderma virens Gv29-8]
Length = 297
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 20 YRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFST---KTYKSICRPEDLRGPFGQFGRLKD 76
Y P+ RG GG G + S + D F+T + +LR F +FGR+
Sbjct: 189 YVPPALRGDRGGAGERMGGS---KYGERDDFATLRVTNVSEMAEESELRDMFERFGRVTR 245
Query: 77 IYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
++L +D TG +GF F+ + D +DA A MDG+ L V FA++
Sbjct: 246 VFLAKDRETGMAKGFAFISFADHSDAVTACNKMDGFGFKHLILRVEFAKK 295
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
++L+ F FG + D+ + RD YTG+ +GFGF+Q+ ++A +A M+G + GRE+ V
Sbjct: 434 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 493
Query: 122 VFAEENR 128
+A++++
Sbjct: 494 SYAQDSK 500
>gi|198438021|ref|XP_002129706.1| PREDICTED: similar to cold inducible RNA binding protein [Ciona
intestinalis]
Length = 469
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C +DL FG FG + + + RD T RGF F+ + A +A M G ++GR
Sbjct: 19 CSEQDLEKAFGMFGDISQVMVLRDRETNVSRGFAFMSFESQDSADEAIRRMHGVEIMGRC 78
Query: 119 LTVVFAE 125
+TV AE
Sbjct: 79 VTVRKAE 85
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
L VRNL +D EDL F FG L+ I++P D TG +GF +VQY DP
Sbjct: 308 LFVRNLSYD----------VSYEDLEAEFSSFGNLEQIHIPLDKTTGSSKGFAYVQYTDP 357
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRK 129
A A DG GR + ++ A R+
Sbjct: 358 DSAEKALVDRDGRTFQGRLIHILPATAKRE 387
Score = 40.8 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+D+R FG++G+L+ + +P+ G RGF F + +A A + LLGR L +
Sbjct: 716 KDVRALFGEYGQLRSVRVPKKMDRG-ARGFAFADFTTVKEAQSAMDALKDTHLLGRRLVL 774
Query: 122 VFAEEN 127
FAEE+
Sbjct: 775 DFAEED 780
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
E L FG++G ++ + + RD TG RGFGFV+Y + DA DA M+G L GR
Sbjct: 16 TNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEGMNGKTLDGRA 75
Query: 119 LTV 121
+ V
Sbjct: 76 IRV 78
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA--DAADAKYHMDGYLLLGREL 119
E L FG++G L D+ L RD TG PRGFGFV + PA +AA ++ HM L GR L
Sbjct: 59 EGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVSEAHM----LDGRNL 114
Query: 120 TVVFAEENRKKPSEMRA 136
V A + P+ +RA
Sbjct: 115 DVKKAVPREQAPAPVRA 131
>gi|291384550|ref|XP_002708825.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 359
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAAFGKYGRIIEVLLMKDRETSKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|328771827|gb|EGF81866.1| hypothetical protein BATDEDRAFT_23541 [Batrachochytrium
dendrobatidis JAM81]
Length = 224
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 32 RGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGF 91
R D+P SL N + F + + R EDL G F ++G++ + D T E RGF
Sbjct: 46 RNVDMPCSLNSTNTGTNLFVSGLSMDV-RNEDLEGIFSKYGKVLKCEVMFDPRTRESRGF 104
Query: 92 GFVQYIDPADAADAKYHMDGYLLLGRELTV 121
GFV + + DA DA ++G LLGR L V
Sbjct: 105 GFVNFANVEDADDA-LTLNGADLLGRPLMV 133
>gi|313244257|emb|CBY15081.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMD----GYLLLG 116
PE + F FG ++DI++P D+ T + RGF +V++ + DA A+ H + + G
Sbjct: 99 PEQIAPFFQDFGEIRDIHIPIDFKTQKMRGFCYVEFEELGDAEVAREHYNKPDIKLEICG 158
Query: 117 RELTVVFAEENRKKPSEMRARE 138
++L+V +A +RK P +M+ ++
Sbjct: 159 KQLSVQYAFGDRKTPGQMKGQK 180
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR FG FG + D+ + D TG RGFGFV + P +A A MDG L GR++ V +
Sbjct: 61 LRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVALQEMDGRELAGRQIRVDY 120
Query: 124 AEE 126
A +
Sbjct: 121 ATD 123
>gi|440135805|gb|AGB85016.1| arginine/serine-rich 45 protein [Nicotiana tabacum]
Length = 413
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L+ FG FG + + L D+ P+GF +V++ DA A+ HMDG + G+ + F
Sbjct: 117 LKEIFGNFGEILHVQLVIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDGAQIDGKIVHAKF 176
Query: 124 AEENRKK-PSEMRA 136
RKK PS RA
Sbjct: 177 TLPERKKAPSPPRA 190
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DL+ F FG L+ + L +D TG RG+GFVQ+ DP A +A M+G+ L GR + V
Sbjct: 282 QDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIRV 340
Query: 122 VFAEENRKKPSEMRARERFRSRSYDG 147
+ S +RF+ +++ G
Sbjct: 341 GLGNDKFTPESTANLLQRFQGQNHSG 366
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 5 SYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDL 64
S S S SP GR +PRG D ++ V NL H++ + L
Sbjct: 2 SASLSQSPRSRAGRSPDRETPRGGDADGREDTAGTIFVGNLNHETSERR----------L 51
Query: 65 RGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
R F ++GR+ + + TG +GFGFV++ D DA DA DG + GR + FA
Sbjct: 52 REFFEEYGRVLSTKVVFNPETGRSKGFGFVKFDDARDAEDAIKQADGQTMDGRTIKCNFA 111
Query: 125 --EENRKKPSEMRA 136
+ +R +P R
Sbjct: 112 KYQPHRGQPHAFRG 125
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ +F T +DL F ++G++ DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNI---TFRTSA-------DDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRAR 137
+A A +DG + GR + V A+ R R R
Sbjct: 67 ADEAQKAIERLDGRTVDGRNIVVQSAKYGRNDEPIHRGR 105
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
D+ F FG++ + + +D +T + RG FV Y+ DAA A MD +L GR+LTV
Sbjct: 72 DIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAARSMDAKILNGRKLTVS 131
Query: 123 FAEEN 127
A +N
Sbjct: 132 IAADN 136
>gi|193620317|ref|XP_001945375.1| PREDICTED: hypothetical protein LOC100159253 isoform 1
[Acyrthosiphon pisum]
gi|328716903|ref|XP_003246070.1| PREDICTED: hypothetical protein LOC100159253 isoform 2
[Acyrthosiphon pisum]
Length = 317
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E ++ F FG +K++ +P D + +GF +++Y P +A +A HMDG + G+E+T
Sbjct: 174 EHIQEIFSDFGTIKEVDVPLDRFNKLCKGFSYIEYSSPEEAENAMKHMDGGQIDGQEITC 233
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+ L+ F FG + ++ + D +G RGFGFV + + DA AK MDG LLGR L +
Sbjct: 55 QSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRI 114
Query: 122 VFAEE 126
FA E
Sbjct: 115 SFALE 119
>gi|157417688|gb|ABV54791.1| RNA-binding 1-like protein [Ilyanassa obsoleta]
Length = 149
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 46 RHDSFSTKTYKSI------CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
RH FS + + C ++L FG++G LK++++ R +P GF FV++ DP
Sbjct: 3 RHRDFSVECKVYVGELGHGCAKQELEXKFGKYGSLKNVWVAR-----QPAGFAFVEFDDP 57
Query: 100 ADAADAKYHMDGYLLLGRELTV 121
DA DA +DG + GR + V
Sbjct: 58 RDAEDAVRALDGTRINGRRVRV 79
>gi|224101457|ref|XP_002312289.1| predicted protein [Populus trichocarpa]
gi|222852109|gb|EEE89656.1| predicted protein [Populus trichocarpa]
Length = 174
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +KD+ P D T + R FGFV +++ DAA A +MDG L GR LTV +
Sbjct: 26 LHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAASAMDNMDGAELYGRVLTVNY 85
Query: 124 A 124
A
Sbjct: 86 A 86
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 28/149 (18%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL FG++GR++++ L RDY F+++ DP DA +A+Y++DG + G + V
Sbjct: 26 DLEYLFGRYGRIREVELKRDY--------AFIEFSDPRDADEARYNLDGRDVDGSRILVE 77
Query: 123 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSPPPR 176
FA+ + + SR Y GR PP R H+AR ++ D+ + R
Sbjct: 78 FAKGVPRGAAGG-------SREYMGRGPPPGTGRCFNCGIDGHWARD-CKAGDWKNKCYR 129
Query: 177 ---RGRDSRSI--SPRYRRYRERSYSRSP 200
RG R+ SPR R RERSYSRSP
Sbjct: 130 CGERGHIERNCQNSPRNLR-RERSYSRSP 157
>gi|448878425|gb|AGE46175.1| arginine/serine-rich splicing factor SCL33 transcript III
[Physcomitrella patens subsp. patens]
Length = 95
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 10/50 (20%)
Query: 37 PTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTG 86
PTSLLVRN+ D C +DLR PF ++G +KD+YLPRDYYTG
Sbjct: 55 PTSLLVRNIPRD----------CTADDLRIPFERYGVVKDVYLPRDYYTG 94
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
E L FG++G ++ + + RD TG RGFGFV+Y + DA DA M+G L GR +
Sbjct: 17 NEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEGMNGKTLDGRAI 76
Query: 120 TV 121
V
Sbjct: 77 RV 78
>gi|449452837|ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
sativus]
gi|449529401|ref|XP_004171688.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
sativus]
Length = 171
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F FG +KD+ P D T + R FGFV +++ DA+ A +MDG L GR LTV +
Sbjct: 24 LHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDASAAMDNMDGAELYGRVLTVNY 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|223890219|ref|NP_001138818.1| RNA-binding motif protein, X-linked-like-3 [Homo sapiens]
gi|229485971|sp|Q8N7X1.2|RMXL3_HUMAN RecName: Full=RNA-binding motif protein, X-linked-like-3
Length = 1067
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L + KT + + E FG++G + ++L +D T + RGF FV
Sbjct: 5 DRPEKLFIGGL-----NLKTDEKALKAE-----FGKYGHIIKVFLMKDRKTNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM-------RARERFRSRSYDG 147
+ PADA A M+G L G+ + V + K S +R RF R+ G
Sbjct: 55 TFESPADAKAAARDMNGKYLDGKAIMVAQTIKPAFKSSRWVPPTPGSGSRSRFSHRTRGG 114
Query: 148 RRSPPR 153
SP R
Sbjct: 115 GSSPQR 120
>gi|119609850|gb|EAW89444.1| splicing factor, arginine/serine-rich 2, isoform CRA_e [Homo
sapiens]
Length = 78
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
TSL V NL TY++ P+ LR F ++GR+ D+Y+PRD YT E RGF FV++
Sbjct: 14 TSLKVDNL--------TYRT--SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFH 63
Query: 98 DPADAADAK 106
D DA D +
Sbjct: 64 DKRDAEDVR 72
>gi|194377938|dbj|BAG63332.1| unnamed protein product [Homo sapiens]
Length = 1076
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L + KT + + E FG++G + ++L +D T + RGF FV
Sbjct: 5 DRPEKLFIGGL-----NLKTDEKALKAE-----FGKYGHIIKVFLMKDRKTNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM-------RARERFRSRSYDG 147
+ PADA A M+G L G+ + V + K S +R RF R+ G
Sbjct: 55 TFESPADAKAAARDMNGKYLDGKAIMVAQTIKPAFKSSRWVPPTPGSGSRSRFSHRTRGG 114
Query: 148 RRSPPR 153
SP R
Sbjct: 115 GSSPQR 120
>gi|119623025|gb|EAX02620.1| chromosome X open reading frame 55 [Homo sapiens]
Length = 1066
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L + KT + + E FG++G + ++L +D T + RGF FV
Sbjct: 4 DRPEKLFIGGL-----NLKTDEKALKAE-----FGKYGHIIKVFLMKDRKTNKSRGFAFV 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEM-------RARERFRSRSYDG 147
+ PADA A M+G L G+ + V + K S +R RF R+ G
Sbjct: 54 TFESPADAKAAARDMNGKYLDGKAIMVAQTIKPAFKSSRWVPPTPGSGSRSRFSHRTRGG 113
Query: 148 RRSPPR 153
SP R
Sbjct: 114 GSSPQR 119
>gi|161077984|ref|NP_001097042.1| CG34334 [Drosophila melanogaster]
gi|113205041|gb|ABI34254.1| SD20656p [Drosophila melanogaster]
gi|158031885|gb|ABW09459.1| CG34334 [Drosophila melanogaster]
Length = 708
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 42 VRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPA 100
VRN+R K E + FG FG L + P D + G + RG+ FV+Y P
Sbjct: 532 VRNVR---LHIKGLTRQVTKEHITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPE 588
Query: 101 DAADAKYHMDGYLLLGRELTV-VFAEENRKKP 131
D A A HM+G + G+ + V F E K P
Sbjct: 589 DCASAIKHMNGGQIDGKLIRVSAFQESMLKAP 620
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+D + FG+FG L+++++ D TG+ +GF +VQ+ DP DA +A +D + GR L +
Sbjct: 345 DDFKELFGKFGELEEVHIALDTRTGQSKGFAYVQFKDPKDAVEAYIELDKQIFQGRLLHI 404
Query: 122 VFAEENR 128
+ A +
Sbjct: 405 LPANSQK 411
Score = 43.1 bits (100), Expect = 0.086, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAE 125
F FG+LK + +P+ + RGF FV+++ P +A +A + G LLGR L + +A+
Sbjct: 760 FSSFGQLKSVRVPKKF-DKSARGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQ 816
>gi|358252952|dbj|GAA51023.1| serine/arginine-rich splicing factor 12, partial [Clonorchis
sinensis]
Length = 91
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE 138
+GF F+++ DP DA DA Y+MD +GR++ V F RK P+EMR +E
Sbjct: 2 KGFAFIEFEDPRDAEDAHYNMDHTRFMGRDIEVEFTRGYRKTPAEMRLKE 51
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRDVDGRNIMVQFAK 93
>gi|115646704|gb|ABJ17088.1| SD01194p [Drosophila melanogaster]
Length = 708
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 42 VRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPA 100
VRN+R K E + FG FG L + P D + G + RG+ FV+Y P
Sbjct: 532 VRNVR---LHIKGLTRQVTKEHITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPE 588
Query: 101 DAADAKYHMDGYLLLGRELTV-VFAEENRKKP 131
D A A HM+G + G+ + V F E K P
Sbjct: 589 DCASAIKHMNGGQIDGKLIRVSAFQESMLKAP 620
>gi|378522970|sp|P0DJD4.1|RBY1C_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member C
Length = 496
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 25/123 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + K K++ FG+ G + ++ L +D T + RGF F+
Sbjct: 5 DHPGKLFIGGLNRET-NEKMLKAV---------FGKHGPISEVLLIKDR-TSKSRGFAFI 53
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRY 154
+ +PADA +A M+G L G+ + V E +KPS F+S GRR PP
Sbjct: 54 TFENPADAKNAAKDMNGKSLHGKAIKV----EQAQKPS-------FQS---GGRRRPPAS 99
Query: 155 SRS 157
SR+
Sbjct: 100 SRN 102
>gi|1843458|gb|AAB81555.1| Rbm [Mus musculus]
Length = 380
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
R + L+ FG+FG + + L RD T + RGF F+ + PADA +A M+G +L G+
Sbjct: 19 TRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEMNGVILDGKR 78
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSR 166
+ V A ++PS + + + R PP +SR+ RG SR
Sbjct: 79 IKVKQA----RRPSSLESGSKKR---------PPSFSRT----RGASR 109
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR F FG + + D TG +GFG+V++ + ADAA A+ M Y L GR+L V F
Sbjct: 233 LRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQKEMHEYELDGRQLNVDF 292
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPP 152
+ R KP A R+ Y +RSPP
Sbjct: 293 STP-RAKPD---ANGGARANKYGDKRSPP 317
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C E ++ F ++G + + LP D TG +GFG+V + +A A ++G + GR
Sbjct: 330 CSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRA 389
Query: 119 LTVVFA 124
+ + +A
Sbjct: 390 IRIDYA 395
>gi|443726784|gb|ELU13843.1| hypothetical protein CAPTEDRAFT_222121 [Capitella teleta]
Length = 232
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 23/115 (20%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDI-----YLPRDYYTGEPR--- 89
TSL VRN+ R E+LR FG++G + D + PR + + +
Sbjct: 10 TSLYVRNV----------PDTTRSEELRSLFGKYGPISDTNQEQSFKPRLLQSKQAKCKW 59
Query: 90 -----GFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
+ DP DA DA YH+D G +L + FA +RK PS+MR +ER
Sbjct: 60 QRVNVNVPNSTFEDPRDAEDALYHLDRTRFFGCDLEIEFARGDRKTPSQMRTKER 114
>gi|324510588|gb|ADY44428.1| RNA-binding protein with serine-rich domain 1-B [Ascaris suum]
Length = 361
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 60/143 (41%), Gaps = 29/143 (20%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRD-YYTGEPRGFGFVQYID 98
L VRNL + E L FG +G LK +P D +T RG+G+V++
Sbjct: 220 LCVRNLSRNVTK----------EHLAEIFGVYGALKSCEMPMDRQHTHLGRGYGYVEFES 269
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSP 158
DA A HMDG + G+E+T + R S R SPPRY
Sbjct: 270 ADDADKALKHMDGGQIDGQEITCELTHQPRTAISNGGGRRVL---------SPPRY---- 316
Query: 159 HYARGYSRSPDYYSPPPRRGRDS 181
RG SP Y PPR GR +
Sbjct: 317 ---RGG--SPRRYRSPPRGGRGT 334
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
C EDL+ F + G L ++ P D T +P+GF FV Y+ P +A A +DG GR
Sbjct: 409 CTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALAQLDGQTFQGRV 468
Query: 119 LTVVFAEENRKKPSE 133
L V+ + ++K +
Sbjct: 469 LHVMASRLKKEKADQ 483
Score = 37.4 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM-DGYLLLGRELT 120
++LR F FG LK + LP+ G RGFGF+ ++ DA A + L GR L
Sbjct: 818 KELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRLV 877
Query: 121 VVFAE 125
+ +A+
Sbjct: 878 LEWAD 882
>gi|395394008|ref|NP_001257441.1| RNA-binding motif protein, Y chromosome, family 1 member B [Mus
musculus]
gi|341942161|sp|Q60990.3|RBY1B_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B; AltName: Full=RNA-binding motif protein 1
Length = 380
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
R + L+ FG+FG + + L RD T + RGF F+ + PADA +A M+G +L G+
Sbjct: 19 TRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEMNGVILDGKR 78
Query: 119 LTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRSPHYARGYSR 166
+ V A ++PS + + + R PP +SR+ RG SR
Sbjct: 79 IKVKQA----RRPSSLESGSKKR---------PPSFSRT----RGASR 109
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F + G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F + G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|195568088|ref|XP_002107586.1| GD17555 [Drosophila simulans]
gi|194204997|gb|EDX18573.1| GD17555 [Drosophila simulans]
Length = 631
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 42 VRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPA 100
VRN+R K + FG FG L + P D + G + RG+ FV+Y P
Sbjct: 459 VRNVR---LHIKGLTRQVTKAHITEIFGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPE 515
Query: 101 DAADAKYHMDGYLLLGRELTVVFAEENRKK 130
D A+A HM+G + G+ + V +EN K
Sbjct: 516 DCANAIKHMNGGQIDGKLIRVSAFQENMLK 545
>gi|115449133|ref|NP_001048346.1| Os02g0788300 [Oryza sativa Japonica Group]
gi|47497761|dbj|BAD19861.1| putative initiation factor 3g [Oryza sativa Japonica Group]
gi|113537877|dbj|BAF10260.1| Os02g0788300 [Oryza sativa Japonica Group]
gi|125541408|gb|EAY87803.1| hypothetical protein OsI_09222 [Oryza sativa Indica Group]
gi|125583953|gb|EAZ24884.1| hypothetical protein OsJ_08662 [Oryza sativa Japonica Group]
Length = 289
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 19 RYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIY 78
+Y P PR R R+ S+ V NL D+ R EDLR FG FG L Y
Sbjct: 190 KYVPPKPR-ESEMRRRNDENSVRVTNLSEDT----------REEDLRELFGSFGPLTRAY 238
Query: 79 LPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGY----LLLGRE 118
+ D+ TGE RGFGF+ ++ DA A ++GY L+L E
Sbjct: 239 VALDHRTGESRGFGFLSFVYREDAERAIAKLNGYGYDSLILNVE 282
>gi|384250305|gb|EIE23785.1| hypothetical protein COCSUDRAFT_66096 [Coccomyxa subellipsoidea
C-169]
Length = 406
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
++ F FG +K + L D PRGF +V+Y D +A A+ HMDG L G L+V F
Sbjct: 144 IKEIFSTFGAIKSVELSVDKVVNLPRGFAYVEYKDRDEAEKARVHMDGGQLDGNVLSVQF 203
Query: 124 AEENRKK 130
RK+
Sbjct: 204 VLVPRKR 210
>gi|330843751|ref|XP_003293810.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
gi|325075834|gb|EGC29677.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
Length = 292
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
R EDLR F QFG++ + + D T E RGFGFV ++ +A DA +D L G
Sbjct: 79 TREEDLRDTFAQFGKIAECTILVDPNTKESRGFGFVTFLSSDEATDAISRLDSSKLDGNV 138
Query: 119 LTV 121
+ V
Sbjct: 139 IRV 141
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DL+ F FG L+ + L ++ G +G+GFVQ+IDPA A +A M+G+ L GR + V
Sbjct: 360 DDLKNVFEPFGELEFVQLQKEEQ-GRSKGYGFVQFIDPAQAKEALEKMNGFELAGRPIRV 418
Query: 122 VFAEENRKKPSEMRARERFRSR 143
+ S +RF S+
Sbjct: 419 GLGNDKFTPESTQSLLQRFASQ 440
>gi|194897890|ref|XP_001978743.1| GG19755 [Drosophila erecta]
gi|190650392|gb|EDV47670.1| GG19755 [Drosophila erecta]
Length = 749
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 42 VRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPA 100
VRN+R K E + FG FG L + P D Y G + RG+ FV+Y P
Sbjct: 567 VRNVR---LHIKGLTRQVTKEHVTEIFGHFGPLTAVDFPMDRYQGRQGRGYAFVEYSRPE 623
Query: 101 DAADAKYHMDGYLLLGRELTV-VFAEENRKKP 131
D A A HM+G + G+ + V F E K P
Sbjct: 624 DCASAIKHMNGGQIDGKRIRVSAFQESMLKAP 655
>gi|260787130|ref|XP_002588608.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
gi|229273773|gb|EEN44619.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
Length = 130
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F +FG + + + RD++TG RGFGFV++ P++A A+ M L GR + V +
Sbjct: 16 LCQAFSRFGTVTECKVIRDHWTGRSRGFGFVKFSAPSEADVARKDMHFQHLDGRTIRVDY 75
Query: 124 AEENRKKPSEMRARERFRSRSYDGR-RSPPRYSRSPHYARGYSRSPDY 170
A + + + ER+ R+Y G RS +S +Y GY R Y
Sbjct: 76 A---KYRFGSAASNERYTCRNYSGLGRSHYNSGKSSYYNSGYVRDSYY 120
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 23 PSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRD 82
P+P G +G D + VRNL + +C +D+R F +FG L ++++P D
Sbjct: 489 PAPLGE-DDKGLDETGRIFVRNLAY----------VCTEDDIRALFEKFGPLSEVHMPLD 537
Query: 83 YYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
T +P+G FV ++ P +A A +D + GR L ++ A
Sbjct: 538 TQTKKPKGIAFVTFLHPENAVKAFTQLDASVFKGRLLHLLPA 579
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DL+ F +FGR++ + D T E RGFGFV + D DA DA ++ + GR++ V
Sbjct: 79 QDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAVKELNNQEVQGRKMRV 138
Query: 122 VFAEENR 128
A+ R
Sbjct: 139 EHAKRKR 145
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F + G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA+
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAK 93
>gi|393212747|gb|EJC98246.1| hypothetical protein FOMMEDRAFT_171180 [Fomitiporia mediterranea
MF3/22]
Length = 803
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 3 GRSYSYSPSPPRDYGRRYRSPSPRGHYG---------GRGRDLPTSLLVRNLRHDSFSTK 53
GR S+SPSP R G P + + G P +L V+N+ S
Sbjct: 208 GRGASHSPSPRRMSGPFVHGPGQQVQFAPLSGPGAGSHSGLIDPCNLFVKNIDETIDSGT 267
Query: 54 TYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYL 113
++ F QFG++ + RD +G RGFGFV Y P AA A + M+G +
Sbjct: 268 LFQH----------FTQFGQIVSARVMRDE-SGRSRGFGFVSYQTPDQAALALHSMNGVV 316
Query: 114 LLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPR 153
L +++ V E P ++R +E+ +R G + PR
Sbjct: 317 LGQKQIVVRLHE-----PKQLR-QEKLAARFAGGHNNHPR 350
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea mays]
Length = 248
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F + G++ D+++PRD TG+ RGF FV+Y
Sbjct: 17 SLLVLNI---SFRTTA-------DDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG + GR + V FA
Sbjct: 67 ADEAQKAIDRLDGRNVDGRNIMVQFAN 93
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 33 GRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFG 92
GRD + NL S +T DL FG++G ++ + D ++ EPRGF
Sbjct: 66 GRDAGDNNPGNNLHVSGLSNRTTD-----RDLEDAFGKYGAIERAQVMYDPHSREPRGFA 120
Query: 93 FVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKK 130
FV ++ DA A M+G LGR++TV A R +
Sbjct: 121 FVTFVKAEDAEAAITAMNGTEFLGRKITVDKARRGRAR 158
>gi|442753297|gb|JAA68808.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 110
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA D M+G L G+ + V
Sbjct: 24 LEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|344270020|ref|XP_003406844.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Loxodonta africana]
Length = 477
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 41 LVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPA 100
+V R T + + L FG++GR+ ++ L +D T + RGF FV + A
Sbjct: 87 IVEAGRPGKLFTGGLHTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESSA 146
Query: 101 DAADAKYHMDGYLLLGRELTVVFA 124
DA DA M+G L G+ + V A
Sbjct: 147 DAKDAARDMNGKSLDGKAIKVEQA 170
>gi|426245729|ref|XP_004016657.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Ovis
aries]
Length = 174
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L H++ + L FG++G + ++ L +D T + RGF F+
Sbjct: 5 DRPGKLFIGGLNHET----------DEKSLEAAFGKYGHISEVLLMKDRETNKSRGFAFI 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
+ PADA A M+G L G+ + V A
Sbjct: 55 TFESPADAKAAVRDMNGKSLDGKAIKVAQA 84
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E + FG+ G++ + L D TG+P+GFGF++Y D AA A +++ + L GR L V
Sbjct: 23 EQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVRNLNDFDLKGRTLRV 82
Query: 122 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRY---SRSPHYARGYSRSPDYYSPPP 175
++ +NR ++ +++ D R+PP + P+ R PD + PP
Sbjct: 83 DYSNDNRGTSNQ--------NQTQDNNRAPPTAHFDTNQPNGGR-----PDASAVPP 126
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEEN 127
F ++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V
Sbjct: 28 FSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAREMNGKSLDGKPIKV------ 81
Query: 128 RKKPSEMRARERFRSRSYDGRRSPP 152
E + +F S GRR PP
Sbjct: 82 -----EQATKPQFESA---GRRGPP 98
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL FG++GR++ + + + F FV++ DP DA DA+Y++DG G +
Sbjct: 26 RSRDLEDLFGRYGRVRYVDMKHE--------FAFVEFSDPRDADDARYNLDGRDFDGSRM 77
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYAR 162
V FA+ + R R+R R Y GR PP R H+AR
Sbjct: 78 IVEFAKGVPRGQGGSRDRDRGGDREYMGRGPPPGSGRCFNCGIDGHWAR 126
>gi|148684912|gb|EDL16859.1| mCG120440 [Mus musculus]
Length = 366
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + +PADA A M+G L G+ + V
Sbjct: 55 LETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAARDMNGKSLDGKAIKVAQ 114
Query: 124 A 124
A
Sbjct: 115 A 115
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 24/118 (20%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L +T+T + L F ++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGL-----NTETTEKA-----LEQYFSKYGRIVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPP 152
+ PADA DA M+G L G+ + V E + +F S GRR PP
Sbjct: 55 TFESPADAKDAAREMNGKSLDGKPIKV-----------EQATKPQFESA---GRRGPP 98
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ C+ +GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNTETNEKALEAVFCK----------YGRVVEVLLMKDRETNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
+ PADA DA ++G L G+ + V E KPS
Sbjct: 55 TFESPADAKDAARELNGKALDGKPIKV----EQATKPS 88
>gi|395815171|ref|XP_003781108.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Otolemur
garnettii]
Length = 393
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAAFGKYGRIVEVLLMKDRETSKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|71027799|ref|XP_763543.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350496|gb|EAN31260.1| nucleic acid binding factor, putative [Theileria parva]
Length = 421
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 4 RSYSYSPSPPRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
R+YS +P D R Y + G GR R +P L V + +F T +
Sbjct: 309 RTYSDAPKTYSDGSRTYSN----GSRNGRDRSIP-KLFVGRI---AFETSVHS------- 353
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
LR F QFG + D+Y+P+D +T + +GFGF+ + + A +++ GRE+ V +
Sbjct: 354 LRTYFSQFGEVIDVYIPKDPHTQKGKGFGFITFANKNSIHSALDPSLKHVVDGREIIVDY 413
Query: 124 AE 125
A+
Sbjct: 414 AD 415
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 62 EDLRGPFGQFGRLKDIYLPR-DYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
+DL F +FG + D Y PR + Y+G +GFGF+ + + D+ + ++++GRE+
Sbjct: 132 DDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFISF-ENEDSIRKVFESGPHVIMGREVI 190
Query: 121 VVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR-------SPHYARGYSRSPDYYSP 173
V A + S+ + R + S+S R PP + R S Y R Y PDY S
Sbjct: 191 VDRATGTKYHSSDYK-RLEYSSQSGPKRHYPPPHRRFRDYYPDSYRYKRHYDSYPDYPSK 249
Query: 174 PPRR----GRDS--RSISPRYRRYRERSYSRSPYGSRSYSPSRSRSRSLDYSR 220
PRR RDS +S+ P + ++ + S +S SR+ SR+ YSR
Sbjct: 250 YPRRERHYERDSYYQSVPPYRQSSNSSTFDPNKPVSFVFSGSRNESRNEPYSR 302
>gi|195355643|ref|XP_002044300.1| GM10061 [Drosophila sechellia]
gi|194129611|gb|EDW51654.1| GM10061 [Drosophila sechellia]
Length = 707
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 68 FGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
FG FG L + P D + G + RG+ FV+Y P D A A HM+G + G+ + V +E
Sbjct: 558 FGHFGALTAVDFPMDRFQGRQGRGYAFVEYSRPEDCASAIKHMNGGQIDGKLIRVSAFQE 617
Query: 127 NRKK 130
N K
Sbjct: 618 NMLK 621
>gi|65301143|ref|NP_083936.1| RNA-binding motif protein, X-linked-like-2 [Mus musculus]
gi|12838734|dbj|BAB24311.1| unnamed protein product [Mus musculus]
Length = 385
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L + L ++ + L FG++GR+ ++ L +D T + RGF FV
Sbjct: 5 DRPGKLFIGGLNLETDE----------KGLETAFGKYGRIIEVLLMKDRETSKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
+ +PADA A M+G L G+ + V A
Sbjct: 55 TFENPADAKAAARDMNGKSLDGKAIKVAQA 84
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 61 PED-----LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLL 115
PED L F GRL+D+++ R+ P GFGF+ + DP DA DA MDG +
Sbjct: 10 PEDASRTELEREFECIGRLRDVWVARN-----PPGFGFIIFEDPRDAEDAVREMDGKKIC 64
Query: 116 GRELTVVFA 124
G + V A
Sbjct: 65 GSRIRVELA 73
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++D+ + RDY FV++ DP DA DA+Y++DG + G L
Sbjct: 23 RSRDLERVFSRYGRVRDVDMKRDY--------AFVEFSDPRDADDARYNLDGRDVDGSRL 74
Query: 120 TVVFAE 125
V FA+
Sbjct: 75 IVEFAK 80
>gi|1033165|gb|AAC16917.1| Y-chromosome RNA recognition motif protein, partial [Homo sapiens]
Length = 220
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 15/94 (15%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L+ FG+ G + ++ L +D T + RGF F+ + +PADA +A M+G L G+ + V
Sbjct: 24 LKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKV-- 80
Query: 124 AEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
E +KPS F+S GRR PP SR+
Sbjct: 81 --EQAQKPS-------FQS---GGRRRPPASSRN 102
>gi|332211654|ref|XP_003254929.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Nomascus
leucogenys]
Length = 393
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 AEE 126
A +
Sbjct: 84 ATK 86
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 21 RSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLP 80
+ P+ +GGR + + NL S E++ F +G + D+Y+P
Sbjct: 33 QQPNSNEDHGGRQEEKKGPPDISNLH--SVKIDNLSFDLTQEEITDMFASYGEIGDVYVP 90
Query: 81 RDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPS 132
R+++T RGF FV+Y++ A A M + GR + V AEE KKP
Sbjct: 91 RNHHTQRMRGFAFVRYVEKQSADAAIDAMHEKEIAGRIIRVGMAEE--KKPD 140
>gi|440802669|gb|ELR23598.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 355
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
D+ F Q+GR++D+ RD TG+P+GF F+ Y DP A +++G L+GR L V
Sbjct: 46 DIVAVFEQYGRVRDLNRARDKKTGDPKGFAFLGYQDPRSCILAVDNLNGIQLVGRTLRV 104
>gi|389748305|gb|EIM89482.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 356
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 57 SICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 116
++ +DL F +GR+ ++LP ++ G+P G+GFV+Y DP DA A MDG + G
Sbjct: 124 TLTSSQDLLNYFLPYGRISHVFLPTNH-RGQPAGYGFVEYKDPEDAKYAVEMMDGAEIEG 182
Query: 117 RELTVVFAEENRKKPSEMRARERF 140
R + V +A+ + + + RF
Sbjct: 183 RRVRVSWAKVTGRGQDKTERKARF 206
>gi|357129728|ref|XP_003566513.1| PREDICTED: uncharacterized protein LOC100839501 [Brachypodium
distachyon]
Length = 292
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 27/119 (22%)
Query: 50 FSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHM 109
ST+T R +D+ FG++GR++++ L DY GFV++ DP DA DA+Y +
Sbjct: 46 LSTRT-----RTQDVEYLFGRYGRVRNVELKHDY--------GFVEFSDPRDADDARYEL 92
Query: 110 DGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYAR 162
DG G + V FA+ + P S +Y GR PP R H+AR
Sbjct: 93 DGRDFDGSRIIVEFAKGTPRGPGG--------SFNYVGRSLPPGSGRCFNCGIEGHWAR 143
>gi|148697220|gb|EDL29167.1| RIKEN cDNA 4930595M18 [Mus musculus]
Length = 794
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
T L V NL H + S+ T K + F +G L D+Y+PR++ T E GF F+ +
Sbjct: 14 TCLKVENLAHHT-SSYTLKHV---------FEDYGPLGDVYIPRNHLTEEHYGFAFIHFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA---EENRKKPSEMRARE-RFRSRSYDGRRSPPR 153
+ DA DA + ++G+LL G +L V + + +P R+ +++ ++D + R
Sbjct: 64 NKCDANDALHSLNGFLLDGCKLKVQMVYNDDPHYAQPDCSSGRQYQYKEENHDLQSECER 123
Query: 154 --YSRSPHYARGYSRS 167
+S + R +SRS
Sbjct: 124 QHFSNTRIQTRSHSRS 139
>gi|296217449|ref|XP_002755014.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Callithrix
jacchus]
Length = 394
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRDMNGKTLDGKAIKVAQ 83
Query: 124 AEE 126
A +
Sbjct: 84 ATK 86
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
T++ V+ L ST+T EDLR FG++G ++++ + + TG RGFGFV +
Sbjct: 108 TNMSVKKLFVGGLSTET-----EAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTF- 161
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS 157
D D+ D +++ G+ V +K S++ + R S+ G PP S
Sbjct: 162 DDYDSVDKVVLQRHHMIKGKRTEV------KKALSKIEMEKAKRKDSFMG---PPHNSGP 212
Query: 158 PHYARGYSRSPDYYSPPPRRG 178
H+ RG P +PPP RG
Sbjct: 213 SHHYRG---PP---APPPHRG 227
>gi|226481264|emb|CAX79097.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 165
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 89 RGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARER 139
+G+ F+++ +P DA DA Y+MD +GR++ V F RK P+EMR +ER
Sbjct: 2 KGYAFIEFENPRDAEDAHYYMDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 52
>gi|397467532|ref|XP_003805466.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Pan
paniscus]
Length = 393
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 35 DLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFV 94
D P L V L + KT + + E FG++G + ++L +D T + RGF FV
Sbjct: 5 DRPEKLFVGGL-----NLKTDEKALKAE-----FGKYGHIIKVFLIKDRKTNKSRGFAFV 54
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA-----EENRKKPSE--MRARERFRSRSYDG 147
+ PADA A M+G L G+ + V E +R P +R RF R+ G
Sbjct: 55 TFESPADAKAAARDMNGKYLDGKAIMVAQTIKPAFESSRWVPPTPGSGSRSRFSHRTRGG 114
Query: 148 RRSPPR 153
SP R
Sbjct: 115 GSSPQR 120
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++ + + D F FV++ DP DA DA+Y +DG + G +
Sbjct: 23 RSRDLERVFSRYGRIRGVDMKND--------FAFVEFSDPRDADDARYSLDGRDVEGSRI 74
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSP 173
V FA K +RE GR PP R H+AR ++ D+ +
Sbjct: 75 IVEFA-----KGGPRGSRENL------GRGLPPGSGRCFNCGIDGHWARD-CKAGDWKNK 122
Query: 174 PPR---RGRDSRSI--SPRYRRYRERSYSRSPYGSRSYSPSRSRSRSLDYSR 220
R RG ++ SP+ RS SRSP RS+SP R RSR YSR
Sbjct: 123 CYRCGERGHIEKNCKNSPKKSSRHGRSLSRSPV--RSHSPRRGRSRDRSYSR 172
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF F+ + PADA A M+G L G+ + V
Sbjct: 24 LEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|340370268|ref|XP_003383668.1| PREDICTED: transformer-2 protein homolog beta-like [Amphimedon
queenslandica]
Length = 232
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 17 GRRYRSPSP---RGHYGGR-GRDLPTSLLVRNL-------RHDSFSTKTYKSICRPEDLR 65
GRR RS +P R HY GR G + P S R++ R++ +DLR
Sbjct: 70 GRRRRSYTPPPHRRHYRGRSGSNSPMSSRRRHVGNRFNPERNNVIGVFGLSLYTNDKDLR 129
Query: 66 GPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAE 125
F ++G++ ++ + D+ T RGF FV Y D DA +AK +G + GR++ V ++
Sbjct: 130 DIFEKYGKINEVQVVYDHQTNRSRGFAFVYYNDVEDAVEAKESCNGIEIDGRKIRVDYSI 189
Query: 126 ENR 128
R
Sbjct: 190 TKR 192
>gi|186681440|ref|YP_001864636.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186463892|gb|ACC79693.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 106
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 15/98 (15%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
S+ V NL +D EDL G F ++G +K + +P D TG PRGF FV+
Sbjct: 2 SIYVGNLSYD----------VTQEDLSGIFAEYGTVKRVQVPTDRETGRPRGFAFVEMGT 51
Query: 99 PADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRA 136
A+ A +DG +GR+L V N+ KP E R
Sbjct: 52 EAEETAAIEALDGAEWMGRDLKV-----NKAKPKEDRG 84
>gi|392562711|gb|EIW55891.1| translation initiation factor 3 RNA-binding subunit [Trametes
versicolor FP-101664 SS1]
Length = 292
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 16 YGRRYRSPSPRGHYGGRG------------RDLPTSLLVRNLRHDSFSTKTYKSICRPED 63
G +Y PS RG GGRG DLPT L V N+ D+ + D
Sbjct: 179 IGGKYVPPSMRG--GGRGPGEAMGRPGGNRDDLPT-LRVTNISEDT----------QEND 225
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDG 111
LR FG FGR+ +Y+ RD TG +GF FV + + + A A M G
Sbjct: 226 LRDLFGVFGRVARVYVGRDRETGAGKGFAFVSFEEKSSAQKAMEKMHG 273
>gi|225711114|gb|ACO11403.1| Peptidyl-prolyl cis-trans isomerase E [Caligus rogercresseyi]
Length = 313
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L+G F FG + ++ +P DY T + RGF F++Y +P DAA A +M L GR L V
Sbjct: 24 LKGAFIPFGEITEVQVPIDYQTEKHRGFAFIEYEEPRDAAAAIDNMHDSELYGRTLRVNL 83
Query: 124 AEENRKKPS 132
A+ R K S
Sbjct: 84 AKPLRLKES 92
>gi|35505506|gb|AAH57796.1| RNA binding motif protein, X-linked-like 2 [Homo sapiens]
Length = 392
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|153252068|ref|NP_055284.3| RNA-binding motif protein, X-linked-like-2 [Homo sapiens]
gi|229462965|sp|O75526.3|HNRGT_HUMAN RecName: Full=RNA-binding motif protein, X-linked-like-2; AltName:
Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
Length = 392
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|427727788|ref|YP_007074025.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427363707|gb|AFY46428.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 101
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
EDL+ F ++G++ + LP D TG PRGF FV+ A+ A +DG +GR+
Sbjct: 12 VTEEDLKRAFAEYGKVNRVQLPTDRETGRPRGFAFVEMETEAEETAAIEALDGAEWMGRD 71
Query: 119 LTVVFAEENRKKPSEMRARER 139
L V N+ KP E R+ R
Sbjct: 72 LKV-----NKAKPREERSSSR 87
>gi|8576316|gb|AAC24858.2| testes specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
gi|119589071|gb|EAW68665.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 392
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 29/152 (19%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R +D+ FG++GR++ + L DY GFV++ +P DA DA+Y +DG + G +
Sbjct: 51 RTKDVEYLFGRYGRIRCVELKHDY--------GFVEFSNPRDADDARYELDGQDVDGSRI 102
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSP 173
V FA + P SR Y GR PP R H+AR + + D+ +
Sbjct: 103 IVEFARGTPRGPGG--------SREYLGRGPPPGSGRCFNCGIDGHWARDCN-AGDWKNK 153
Query: 174 PPRRGRDSR-----SISPRYRRYRERSYSRSP 200
R G SP+ + R RSYSRSP
Sbjct: 154 CYRCGEKGHIEKNCQNSPKNLK-RGRSYSRSP 184
>gi|262118195|ref|NP_775611.2| uncharacterized protein LOC245492 [Mus musculus]
gi|124297553|gb|AAI31911.1| RIKEN cDNA 4930595M18 gene [Mus musculus]
gi|124376274|gb|AAI32592.1| RIKEN cDNA 4930595M18 gene [Mus musculus]
Length = 829
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
T L V NL H + S+ T K + F +G L D+Y+PR++ T E GF F+ +
Sbjct: 14 TCLKVENLAHHT-SSYTLKHV---------FEDYGPLGDVYIPRNHLTEEHYGFAFIHFY 63
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFA---EENRKKPSEMRARE-RFRSRSYDGRRSPPR 153
+ DA DA + ++G+LL G +L V + + +P R+ +++ ++D + R
Sbjct: 64 NKCDANDALHSLNGFLLDGCKLKVQMVYNDDPHYAQPDCSSGRQYQYKEENHDLQSECER 123
Query: 154 --YSRSPHYARGYSRS 167
+S + R +SRS
Sbjct: 124 QHFSNTRIQTRSHSRS 139
>gi|426367314|ref|XP_004050678.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Gorilla
gorilla gorilla]
Length = 392
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL F ++GR++++ L RDY F+++ DP DA DA+Y++DG + G + V
Sbjct: 26 DLEYLFSKYGRIREVELKRDY--------AFIEFSDPRDADDAQYNLDGRDVDGSRIIVE 77
Query: 123 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYAR 162
FA + R SR Y+GR PP R H+AR
Sbjct: 78 FA--------KGVPRGSGGSRDYNGRGPPPGTGRCFNCGVDGHWAR 115
>gi|158257974|dbj|BAF84960.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|350534520|ref|NP_001233578.1| RNA-binding motif protein, X-linked-like-2 [Pan troglodytes]
gi|343958222|dbj|BAK62966.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
gi|343961837|dbj|BAK62506.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
Length = 392
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|154341070|ref|XP_001566488.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063811|emb|CAM40000.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 619
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 38 TSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYI 97
T+L VR L S +D+R FGQ+G + L RD YTGE G FV+Y
Sbjct: 67 TNLFVRKL----------ASAVTEDDMRRLFGQYGTIISFALMRDIYTGESLGTAFVRYS 116
Query: 98 DPADAADAKYHMDGYLLLGRELTVVFAE 125
+A A +DG+ L GR +++ +A+
Sbjct: 117 THEEARSAMAALDGHELYGRPISIQWAK 144
>gi|443723982|gb|ELU12200.1| hypothetical protein CAPTEDRAFT_225018 [Capitella teleta]
Length = 891
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
L VRNL + C+ +DL F ++G L +++LP D +T + +GF FV ++ P
Sbjct: 367 LYVRNLAY----------CCKEDDLEQLFTKYGTLSEVHLPIDSFTKKVKGFAFVSFMFP 416
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARERF 140
A A +DG +GR L ++ +E ++ + F
Sbjct: 417 EHAVKAFQELDGKSWMGRILHILPGKEKTEEQEDGNDESNF 457
>gi|300175056|emb|CBK20367.2| unnamed protein product [Blastocystis hominis]
Length = 301
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
D+ F Q+G ++DI L RD+ TG+ +GFGF++Y + A + G LLGR + V
Sbjct: 48 DIICMFSQWGEVEDINLIRDHDTGKSKGFGFLRYENWLSCVLAVDNFSGMELLGRIVCV 106
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFA 124
F ++GR+ ++ L +D T + RGF FV + PADA DA M+G L G+ + V A
Sbjct: 28 FSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAREMNGKSLDGKPIKVEQA 84
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ L FG++G ++ + + RD TG RGFGFV+Y + DA DA M+G L GR
Sbjct: 16 TNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDAMNGKTLDGRA 75
Query: 119 LTV 121
+ V
Sbjct: 76 IRV 78
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
E L FG++G ++ + + RD TG RGFGFV+Y DA DA M+G L GR
Sbjct: 16 TNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTAMNGKSLDGRA 75
Query: 119 LTV 121
+ V
Sbjct: 76 IRV 78
>gi|432881665|ref|XP_004073891.1| PREDICTED: transformer-2 protein homolog alpha-like [Oryzias
latipes]
Length = 268
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 2 RGRSYSYSPSPPRDYGRRYRSPSP----RGHYGGRGRDLPTSLL-VRNLRHDSFSTKTYK 56
R R+ SYSP R RR ++ SP R H G R P++ L V L + ST
Sbjct: 71 RSRTPSYSPDHRR---RRSQNASPMSSRRRHTGTRENPDPSTCLGVFGL---NLSTT--- 121
Query: 57 SICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG 116
DLR F ++GRL I + D TG RGF F+ + DA +A H +G + G
Sbjct: 122 ----ERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDG 177
Query: 117 RELTVVFAEENR 128
R++ V ++ R
Sbjct: 178 RQIRVDYSITKR 189
>gi|413920160|gb|AFW60092.1| hypothetical protein ZEAMMB73_401962 [Zea mays]
Length = 83
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 15 DYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHD----SFSTKTYKSICRPEDLRGPFGQ 70
++G + R P +GGRGR P R D S + CRPE+LR PF +
Sbjct: 8 EWGVQSRVQPPERGHGGRGRSPPPRRGYGGGRGDHGSVSLLVRNIPLRCRPEELRVPFER 67
Query: 71 FGRLKDIYLPRDYYTG 86
FG ++D+YLPRDY+TG
Sbjct: 68 FGPVRDVYLPRDYHTG 83
>gi|237840719|ref|XP_002369657.1| hypothetical protein TGME49_008970 [Toxoplasma gondii ME49]
gi|211967321|gb|EEB02517.1| hypothetical protein TGME49_008970 [Toxoplasma gondii ME49]
gi|221482873|gb|EEE21204.1| serine/arginine rich splicing factor, putative [Toxoplasma gondii
GT1]
gi|221503334|gb|EEE29032.1| polyadenylate-binding protein, putative [Toxoplasma gondii VEG]
Length = 309
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DLR FG+ +KD+Y+P Y T +PRGF F+++ + G LGR L +
Sbjct: 134 DDLRKFFGRCSDVKDVYIPLHYKTKQPRGFAFIEFETEWAMVKVLKQLQGVEFLGRRLML 193
Query: 122 VFAEENRKKPSEM 134
AE EM
Sbjct: 194 EEAEGEPSTAEEM 206
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
+ L FG++G ++ + + RD TG RGFGFV+Y + DA DA M+G L GR
Sbjct: 16 TNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDAMNGKTLDGRA 75
Query: 119 LTV 121
+ V
Sbjct: 76 IRV 78
>gi|15292733|gb|AAK92735.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
Length = 352
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL F + G++ D++L D +T E RGFGF+ DA +D +L GR +TV
Sbjct: 60 DLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITVE 119
Query: 123 FA 124
A
Sbjct: 120 KA 121
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 29/149 (19%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL FG++GR++++ L RDY F+++ D DA +A+Y +DG + G + V
Sbjct: 26 DLEYLFGRYGRIREVELKRDY--------AFIEFSDHRDADEARYQLDGRDVDGSRIVVE 77
Query: 123 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSPPPR 176
FA+ + P SR Y GR PP R H+AR ++ D+ + R
Sbjct: 78 FAKGVPRGPGG--------SREYMGRGPPPGTGRCFNCGIDGHWAR-DCKAGDWKNKCYR 128
Query: 177 ---RGRDSRSI--SPRYRRYRERSYSRSP 200
RG R+ SPR R RERSYSRSP
Sbjct: 129 CGERGHIERNCQNSPRSVR-RERSYSRSP 156
>gi|434393135|ref|YP_007128082.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428264976|gb|AFZ30922.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 103
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
ED+ FG++G +K + +P D TG PRGF FV+ A+ A +DG +GR L V
Sbjct: 15 EDILAVFGEYGNVKQVQVPTDRETGRPRGFCFVEMSSEAEETAAIEALDGAEWMGRSLKV 74
Query: 122 VFAEENRKKPSE 133
N+ KP E
Sbjct: 75 -----NKAKPRE 81
>gi|170031159|ref|XP_001843454.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869230|gb|EDS32613.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 323
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEEN 127
FG +G ++ + P D + RGF +V +++P A +A HMDG + G+E+T
Sbjct: 195 FGTYGEIRSVDFPVDRFQSFTRGFCYVDFVNPDGAENAIKHMDGGQVDGQEITASAILVQ 254
Query: 128 RKKP 131
+++P
Sbjct: 255 KQRP 258
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 45/67 (67%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
++L+ F FG + ++ + RD YTG+ +GFGF+Q+ ++A +A ++G + GREL V
Sbjct: 616 QELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRELKV 675
Query: 122 VFAEENR 128
FA++++
Sbjct: 676 SFAQDSK 682
>gi|342879144|gb|EGU80408.1| hypothetical protein FOXB_09084 [Fusarium oxysporum Fo5176]
Length = 345
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 7 SYSPSPPRDY-GRRYRSPSPRGHYGGRGRDLPTSLL----VRNLRHDSFSTKTYKSICRP 61
S SP P D G R RS SP GH +D+ S N + F T + +
Sbjct: 29 SASPRPRDDNEGSRRRSASPGGHGDSNMKDVSASRDDDDGAINPGSNLFVTGIHPKLSEA 88
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E + F ++G ++ + RD +T E RGFGFV+ + A AK + G + GR L++
Sbjct: 89 E-VSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSEQAEAAKEGLQGEQIEGRTLSI 147
Query: 122 VFA 124
A
Sbjct: 148 EKA 150
>gi|261859212|dbj|BAI46128.1| RNA binding motif protein, X-linked-like 2 [synthetic construct]
Length = 392
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|8927581|gb|AAF82129.1|AF279289_1 testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 386
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 18 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRDMNGKSLDGKAIKVAQ 77
Query: 124 A 124
A
Sbjct: 78 A 78
>gi|402894334|ref|XP_003910320.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Papio
anubis]
Length = 394
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++GR+ ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|296485840|tpg|DAA27955.1| TPA: RNA-binding protein S1, serine-rich domain-like [Bos taurus]
Length = 265
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 24/127 (18%)
Query: 2 RGRSYSYSPSP-PRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
R RS S SP P + RR RSP+P+ PT + V L + + R
Sbjct: 96 RRRSGSKPKSPRPDEKERRRRSPAPK----------PTKVHVARL---------TRKVTR 136
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEP-RGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
E +R F FGR++ I L RD P +G +V++ +P +AA A HMDG + G+++
Sbjct: 137 -EHIREIFSTFGRVRKIDLRRDRMRAHPSQGHAYVEFENPEEAAKALKHMDGGQIDGQQI 195
Query: 120 --TVVFA 124
T V A
Sbjct: 196 MATAVLA 202
>gi|414878627|tpg|DAA55758.1| TPA: hypothetical protein ZEAMMB73_565122 [Zea mays]
Length = 405
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L+ FG FG + ++ L D PRG+G++++ ADA A HMDG + G + + F
Sbjct: 122 LKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRADAEKALLHMDGGQIDGNIVKLRF 181
Query: 124 AEENRKK 130
+ R++
Sbjct: 182 TLQPRQR 188
>gi|195037837|ref|XP_001990367.1| GH18277 [Drosophila grimshawi]
gi|193894563|gb|EDV93429.1| GH18277 [Drosophila grimshawi]
Length = 397
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 68 FGQFGRLKDIYLPRD-YYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEE 126
F FG +K++ P D Y+ RG +V+Y D A HMDG + G+E+TV
Sbjct: 266 FSSFGTVKNVEFPTDRYHPNFGRGMAYVEYATAEDCESAMKHMDGGQIDGQEITVSPVIV 325
Query: 127 NRKKPSEMRARERFRSRSYDGRRSPPRYSR 156
+++P R + R + RSPP+++R
Sbjct: 326 PKQRPPIRRPSPQMRRPQGNRWRSPPQFNR 355
>gi|331284191|ref|NP_001193587.1| ribonucleic acid binding protein S1-like [Bos taurus]
Length = 294
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 24/127 (18%)
Query: 2 RGRSYSYSPSP-PRDYGRRYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICR 60
R RS S SP P + RR RSP+P+ PT + V L + + R
Sbjct: 96 RRRSGSKPKSPRPDEKERRRRSPAPK----------PTKVHVARL---------TRKVTR 136
Query: 61 PEDLRGPFGQFGRLKDIYLPRDYYTGEP-RGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
E +R F FGR++ I L RD P +G +V++ +P +AA A HMDG + G+++
Sbjct: 137 -EHIREIFSTFGRVRKIDLRRDRMRAHPSQGHAYVEFENPEEAAKALKHMDGGQIDGQQI 195
Query: 120 --TVVFA 124
T V A
Sbjct: 196 MATAVLA 202
>gi|414878628|tpg|DAA55759.1| TPA: hypothetical protein ZEAMMB73_565122 [Zea mays]
gi|448878260|gb|AGE46093.1| arginine/serine-rich splicing factor SR45_1 [Zea mays]
Length = 429
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L+ FG FG + ++ L D PRG+G++++ ADA A HMDG + G + + F
Sbjct: 122 LKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRADAEKALLHMDGGQIDGNIVKLRF 181
Query: 124 AEENRKK 130
+ R++
Sbjct: 182 TLQPRQR 188
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+DL F ++G++ D+++PRD TG+ RGF FV+Y +A A +DG + GR + V
Sbjct: 67 DDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMV 126
Query: 122 VFAE 125
FA+
Sbjct: 127 QFAK 130
>gi|125590156|gb|EAZ30506.1| hypothetical protein OsJ_14553 [Oryza sativa Japonica Group]
Length = 684
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L G F QFG + + RD TG+ +G+GFV+Y D + A A M+GY L GR + V
Sbjct: 355 LIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIAAMNGYHLEGRVIAVRV 414
Query: 124 A 124
A
Sbjct: 415 A 415
>gi|125548044|gb|EAY93866.1| hypothetical protein OsI_15642 [Oryza sativa Indica Group]
Length = 684
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L G F QFG + + RD TG+ +G+GFV+Y D + A A M+GY L GR + V
Sbjct: 355 LIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIAAMNGYHLEGRVIAVRV 414
Query: 124 A 124
A
Sbjct: 415 A 415
>gi|42561780|ref|NP_563787.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|28973767|gb|AAO64199.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
gi|332189991|gb|AEE28112.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 382
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL F + G++ D++L D +T E RGFGF+ DA +D +L GR +TV
Sbjct: 90 DLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITVE 149
Query: 123 FA 124
A
Sbjct: 150 KA 151
>gi|380496040|emb|CCF31933.1| RNA-binding protein with serine-rich domain 1 [Colletotrichum
higginsianum]
Length = 313
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+ L FGQ+GR+KD++LP + G RG ++ Y ADA +A HM L G + V
Sbjct: 95 DHLEEIFGQYGRIKDLHLPINGTLGTNRGTAYILYETEADAEEAIAHMHEAQLDGTVINV 154
Query: 122 VFAEENRK 129
RK
Sbjct: 155 SIVLPRRK 162
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 24 SPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDY 83
SP G G RD T L + L + E LR F +FG+L + + D
Sbjct: 32 SPIGL--GAVRDFTTKLFISGLSRQT----------TDEGLRAKFSEFGQLVEARVVTDR 79
Query: 84 YTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAE 125
+G RGFGFV+Y DAA K MDG L G V+FA+
Sbjct: 80 ISGRSRGFGFVRYATLEDAAKGKEGMDGKFLDGW---VIFAD 118
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 29/149 (19%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DL FG++GR++++ L RDY F+++ + DA +A+Y +DG + G + V
Sbjct: 26 DLEYLFGKYGRIREVELKRDY--------AFIEFSEHRDADEARYQLDGRDVDGSRIVVE 77
Query: 123 FAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSPPPR 176
FA+ + P SR Y GR PP R H+AR ++ D+ + R
Sbjct: 78 FAKGVPRGPGG--------SREYMGRGPPPGTGRCFNCGMDGHWARD-CKAGDWKNKCYR 128
Query: 177 ---RGRDSRSI--SPRYRRYRERSYSRSP 200
RG R+ SPR R RERSYSRSP
Sbjct: 129 CGERGHIERNCQNSPRSVR-RERSYSRSP 156
>gi|443683128|gb|ELT87496.1| hypothetical protein CAPTEDRAFT_155471 [Capitella teleta]
Length = 289
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
DLR FG FG + ++ + D+ TG RGF F+ + + DA +AK G + GR++ V
Sbjct: 146 DLREFFGHFGPIDEVQVVYDHQTGRSRGFAFIYFRNEEDAIEAKDRSPGEEIDGRKIRVD 205
Query: 123 FAEENRK----------KPSEMRARERFRSRSYDGRRSPPRY 154
F+ R KP+ RER + S D RRSP Y
Sbjct: 206 FSITERAHTPTPGIYLGKPTSS-GRERRYNNSRDSRRSPSPY 246
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
E+LR F +FGRL+ + D + E RGF FV + D DA+DA ++G + GR + V
Sbjct: 88 EELRQLFEKFGRLEKCEIIIDPISRESRGFAFVTFEDVRDASDAVQELNGKDIQGRRMRV 147
Query: 122 VFA 124
A
Sbjct: 148 EHA 150
>gi|218192579|gb|EEC75006.1| hypothetical protein OsI_11073 [Oryza sativa Indica Group]
Length = 294
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 28/152 (18%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL FG++GR++++ L RDY F+++ D DA +A+Y++DG + G +
Sbjct: 23 RSRDLEYLFGRYGRIREVELKRDY--------AFIEFSDTRDADEARYNLDGRDVDGSRI 74
Query: 120 TVVFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSRS------PHYARGYSRSPDYYSP 173
V FA+ + + SR Y GR PP R H+AR ++ D+ +
Sbjct: 75 LVEFAKGVPRGAAGG-------SREYMGRGPPPGTGRCFNCGIDGHWARD-CKAGDWKNK 126
Query: 174 PPR---RGRDSRSI--SPRYRRYRERSYSRSP 200
R RG R+ SPR R RERSYSRSP
Sbjct: 127 CYRCGERGHIERNCQNSPRNLR-RERSYSRSP 157
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++++ L RDY F+++ DP DA DA+Y++DG + G +
Sbjct: 23 RSRDLEYLFSKYGRIREVELKRDY--------AFIEFSDPHDADDAQYNLDGREVDGSRI 74
Query: 120 TVVFAE 125
V FA+
Sbjct: 75 IVEFAK 80
>gi|298712976|emb|CBJ26878.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 314
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 45 LRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAAD 104
+ H S T+ K+ + L+ FG +G++ + L D P+G+ FV++++ A+A
Sbjct: 1 MLHVSNLTRNVKA----DHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERAEAEQ 56
Query: 105 AKYHMDGYLLLGRELTVVFAEENRKK 130
A+ ++DG L G + V F +K+
Sbjct: 57 AQLYLDGGQLDGNRIKVAFVLVTKKR 82
>gi|32489985|emb|CAE05015.1| OSJNBa0044M19.2 [Oryza sativa Japonica Group]
Length = 650
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L G F QFG + + RD TG+ +G+GFV+Y D + A A M+GY L GR + V
Sbjct: 323 LIGLFSQFGEIVMAKVIRDRITGQSKGYGFVKYSDVSQANAAIAAMNGYHLEGRVIAVRV 382
Query: 124 A 124
A
Sbjct: 383 A 383
>gi|225708540|gb|ACO10116.1| Splicing factor, arginine/serine-rich 5 [Osmerus mordax]
Length = 135
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R +D+ F FGR++DI L R GFGFV++ DP DA DA Y +DG L +
Sbjct: 16 REKDVERFFKGFGRIRDIDLKR--------GFGFVEFDDPRDAEDAVYELDGKELCNERV 67
Query: 120 TVVFA 124
T+ A
Sbjct: 68 TIEHA 72
>gi|163916618|gb|AAI57793.1| LOC100135403 protein [Xenopus (Silurana) tropicalis]
Length = 375
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L F ++GR+ ++ L +D T + RGF FV + PADA DA ++G L G+ + V
Sbjct: 24 LEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARELNGKALDGKPIKV-- 81
Query: 124 AEENRKKPS 132
E KPS
Sbjct: 82 --EQATKPS 88
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
EDL F ++G++ DIY+PR+ + G RGFGFV+Y++ D A +G L G+ + V
Sbjct: 28 EDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFVRYVNE-DEARKALDENGEELNGQTMRV 86
Query: 122 VFAE 125
A+
Sbjct: 87 SMAD 90
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
L VRNL +D+ + EDL F +FG L+++++ D TG +GF F+QY DP
Sbjct: 303 LFVRNLPYDA----------QKEDLEAEFERFGNLEEVHIALDKKTGTAKGFAFIQYSDP 352
Query: 100 ADAADAKYHMDGYLLLGRELTVVFAEENR--------------KKPSEMRARERFRSRSY 145
+ A DG GR L ++ R KK +E+R R S ++
Sbjct: 353 DSSEQAFVDRDGQTFQGRLLHILPGTAKREDKLNDFDLSKLPLKKQNEIRRRREAASSTF 412
Query: 146 D 146
+
Sbjct: 413 N 413
>gi|430811731|emb|CCJ30824.1| unnamed protein product [Pneumocystis jirovecii]
Length = 274
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 19 RYRSPSPRGHYGGRGRDLPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIY 78
R + P P R RD ++ V N+ D+ ED+R F +FGR+ +Y
Sbjct: 175 RTKRPGPGDSMFRRERDEHFTVRVTNVSEDA----------HEEDIRELFERFGRISRLY 224
Query: 79 LPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGY 112
L +D TG +GF F+ Y D DAA A MD Y
Sbjct: 225 LAKDKDTGRGKGFAFISYYDRTDAARAIEKMDKY 258
>gi|291190584|ref|NP_001167385.1| 35 kDa SR repressor protein [Salmo salar]
gi|223648894|gb|ACN11205.1| 35 kDa SR repressor protein [Salmo salar]
Length = 115
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SL +RN+ +S RPE+LR FG++G + D+Y+P D+ T PRGF ++QY
Sbjct: 11 SLFIRNISDES----------RPEELRREFGRYGPIVDVYIPLDFSTRRPRGFAYIQY-- 58
Query: 99 PADAADAKYHM 109
P + + +M
Sbjct: 59 PLYSCNVLMNM 69
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
R +D+ F +GR++DI L R GFGFV++ DP DA DA Y +DG L
Sbjct: 15 AREKDVERFFKGYGRIRDIDLKR--------GFGFVEFDDPRDAEDAVYELDGKELCNER 66
Query: 119 LTVVFAEENRKKPSEMRARERFRSR----SYDGRRSPP 152
+T+ A + RF +R S D RR+PP
Sbjct: 67 VTIEHARVRLRGGRGRGGGGRFPARYGRGSQDSRRNPP 104
>gi|307110149|gb|EFN58385.1| hypothetical protein CHLNCDRAFT_56825 [Chlorella variabilis]
Length = 1521
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
+D+ F Q G +K + + + TG+PRGFGF+++ D A A ++ G GR + +
Sbjct: 1086 QDVIDHFSQVGPVKHVRIVTERDTGKPRGFGFIEFFDIPTAESAIRNLSGKDFKGRTIRI 1145
Query: 122 VFAEENRKKPSEMRARERFRSRSYDGRRSPP 152
V+AE P E R+ R +D +R PP
Sbjct: 1146 VYAEGG---PGEFRS-----GRDFDDQRGPP 1168
>gi|21355069|ref|NP_650473.1| CG5213 [Drosophila melanogaster]
gi|7300034|gb|AAF55205.1| CG5213 [Drosophila melanogaster]
gi|19528057|gb|AAL90143.1| AT22957p [Drosophila melanogaster]
gi|220949694|gb|ACL87390.1| CG5213-PA [synthetic construct]
gi|220958914|gb|ACL92000.1| CG5213-PA [synthetic construct]
Length = 251
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLG--RELTV 121
+R F +G + D+ L R + RG F+Q+ DA AKY MD Y++ G R LTV
Sbjct: 143 VRELFATYGNIVDVNLLRHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTV 202
Query: 122 VFAEENRKKPSEMRARERFRSRSYDGRRSPPRYSR----SPHYARGYSRSPD 169
F E +K S + +++ + + SPP Y R + H+ SR D
Sbjct: 203 KFVEREKKGSSSTSSGSQYKDKR---KSSPPPYKRRERTNDHHVSKRSRDSD 251
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 63 DLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
+L F +FG ++ + R TG +GFV Y+ AA A MDGY G+ L V
Sbjct: 56 ELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDGYETRGKRLKVA 115
Query: 123 FA 124
FA
Sbjct: 116 FA 117
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++++ L RDY F+++ DP DA DA+Y++DG + G +
Sbjct: 23 RSRDLEYLFSKYGRIREVELKRDY--------AFIEFSDPRDADDAQYNLDGREVDGSRI 74
Query: 120 TVVFAE 125
V FA+
Sbjct: 75 IVEFAK 80
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
R DL F FGR+++I + GFGFV++ DP DA DA Y ++G L+G
Sbjct: 14 VRERDLERFFKGFGRIREISIKN--------GFGFVEFDDPRDADDAVYELNGKDLMGDR 65
Query: 119 LTVVFA 124
++V A
Sbjct: 66 VSVELA 71
>gi|393909058|gb|EJD75300.1| hypothetical protein LOAG_17528 [Loa loa]
Length = 296
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 36 LPTSLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRD-YYTGEPRGFGFV 94
LP L VRNL + E L F +G L+ LP D +T RG+G+V
Sbjct: 153 LPRRLCVRNLSRNVTK----------EHLSEIFSVYGTLRTCELPMDRQHTHLGRGYGYV 202
Query: 95 QYIDPADAADAKYHMDGYLLLGRELTVVFA 124
++ P DA A HMDG + G+E+T
Sbjct: 203 EFEQPEDAEKALKHMDGGQIDGQEVTCELT 232
>gi|405963583|gb|EKC29145.1| Putative RNA-binding protein 19 [Crassostrea gigas]
Length = 878
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 40 LLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDP 99
L VRNL ++ C EDL FG+FG + +++L D T + RG+ F+ ++ P
Sbjct: 374 LFVRNLAYN----------CTQEDLEELFGKFGPIAEVHLSIDTITKKIRGYAFILFMMP 423
Query: 100 ADAADAKYHMDGYLLLGRELTVV 122
A A +DG + +GR L ++
Sbjct: 424 EHAVRAYEELDGTIFMGRMLHIL 446
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 39 SLLVRNLRHDSFSTKTYKSICRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYID 98
SLLV N+ SF T +DL F ++G + DI++PRD TGE RGF FV+Y
Sbjct: 17 SLLVLNV---SFRTTA-------DDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNY 66
Query: 99 PADAADAKYHMDGYLLLGRELTVVFA---------------EENRKKPSEMRARERFRSR 143
+A DA +DG GR L V FA EEN K R+R
Sbjct: 67 EDEAQDAIDGLDGMRFGGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRFRSRSPRPRY 126
Query: 144 SYDGRRSPPRYSRSPHYARGYSRSPDYYSPPPRRGRDSRSISPRYRRYRERSYSRSP 200
D + R Y + D Y R +RSISP Y R R +S SP
Sbjct: 127 REDYQDRDYRRRSQSRSRERYEQ--DRYRDGDHRRHRTRSISPDYDRKHNR-HSGSP 180
>gi|225439817|ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
Length = 307
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 60 RPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGREL 119
R DL F ++GR++D+ + D F FV++ DP DA DA+Y+++G G +
Sbjct: 23 RTRDLESLFSRYGRVRDVDMKHD--------FAFVEFSDPRDADDARYNLNGRDFDGSRI 74
Query: 120 TVVFAE 125
V FA+
Sbjct: 75 IVEFAK 80
>gi|395743087|ref|XP_003780683.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked-like-2 [Pongo abelii]
Length = 392
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 64 LRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVF 123
L FG++G + ++ L +D T + RGF FV + PADA A M+G L G+ + V
Sbjct: 24 LEAEFGKYGHIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQ 83
Query: 124 A 124
A
Sbjct: 84 A 84
>gi|158298413|ref|XP_318582.3| AGAP009570-PA [Anopheles gambiae str. PEST]
gi|157013868|gb|EAA14428.3| AGAP009570-PA [Anopheles gambiae str. PEST]
Length = 323
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 68 FGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV--VFAE 125
F +G + + P + + RGF +V+Y+DP A +A HMDG + G+E+T V +
Sbjct: 203 FSSYGEISKVDFPMERFQPFGRGFCYVEYVDPNGAENAMKHMDGGQIDGQEITASPVLVQ 262
Query: 126 ENR 128
+ R
Sbjct: 263 KQR 265
>gi|241609358|ref|XP_002406762.1| RNA binding protein, putative [Ixodes scapularis]
gi|215502709|gb|EEC12203.1| RNA binding protein, putative [Ixodes scapularis]
Length = 226
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 68 FGQFGRLKDIYLPRDYYTGE-PRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVV 122
FG +G +K + LP D G RGF +V++ +PADA A HMDG + G+E+T
Sbjct: 129 FGCYGTVKGVELPPDRTHGHLSRGFAYVEFENPADAERAMRHMDGGQIDGQEVTAA 184
>gi|195330384|ref|XP_002031884.1| GM23813 [Drosophila sechellia]
gi|194120827|gb|EDW42870.1| GM23813 [Drosophila sechellia]
Length = 375
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 68 FGQFGRLKDIYLPRD-YYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTV 121
F FG +K++ P D ++ RG FV+Y P D A HMDG + G+E+TV
Sbjct: 239 FSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITV 293
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 59 CRPEDLRGPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYIDPADAADAKYHMDGYLLLGRE 118
R DL F FGR+++I + GFGFV++ DP DA DA Y ++G L+G
Sbjct: 14 VRERDLERFFKGFGRIREISIKN--------GFGFVEFDDPRDADDAVYELNGKDLMGDR 65
Query: 119 LTVVFA 124
++V A
Sbjct: 66 VSVELA 71
>gi|195482425|ref|XP_002102041.1| GE17950 [Drosophila yakuba]
gi|194189565|gb|EDX03149.1| GE17950 [Drosophila yakuba]
Length = 709
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 62 EDLRGPFGQFGRLKDIYLPRDYYTG-EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELT 120
E + FG FG L + P D + G RG+ FV+Y P D A A HM+G + G+ +
Sbjct: 546 EHITEIFGHFGALTAVDFPMDRFQGRHGRGYAFVEYSRPEDCACAIKHMNGGQIDGKRIR 605
Query: 121 V-VFAEENRKKP 131
V F E K P
Sbjct: 606 VSAFQESMLKAP 617
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,989,956,861
Number of Sequences: 23463169
Number of extensions: 187286571
Number of successful extensions: 630303
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9233
Number of HSP's successfully gapped in prelim test: 10341
Number of HSP's that attempted gapping in prelim test: 499516
Number of HSP's gapped (non-prelim): 89213
length of query: 220
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 83
effective length of database: 9,144,741,214
effective search space: 759013520762
effective search space used: 759013520762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)