Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>027687
MAATFFPFLSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPEDESFP
SPYPNSIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIG
FVIMDFLEKLQGLMERDYGSTALLAKVGELVAERAREEAEVLRDEGKVEERMVTELSRVL
RLMEMDMAMVKAAVKEETLSERLEQAKARCRQAILVANSF

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027687
        (220 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2026068 - symbol:CRR41 "AT1G51100" species:370...   551  3.0e-53   1


>TAIR|locus:2026068 [details] [associations]
            symbol:CRR41 "AT1G51100" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570 EMBL:AC079828
            EMBL:AY087073 EMBL:BT025782 EMBL:AK228877 IPI:IPI00524128
            PIR:C96548 RefSeq:NP_564582.1 UniGene:At.37894 STRING:Q9C685
            PaxDb:Q9C685 PRIDE:Q9C685 EnsemblPlants:AT1G51100.1 GeneID:841533
            KEGG:ath:AT1G51100 TAIR:At1g51100 eggNOG:NOG252764
            HOGENOM:HOG000238164 InParanoid:Q9C685 OMA:YVIMDFL PhylomeDB:Q9C685
            ProtClustDB:CLSN2688665 Genevestigator:Q9C685 Uniprot:Q9C685
        Length = 211

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 121/215 (56%), Positives = 150/215 (69%)

Query:     9 LSQPNSPLFNHFTSKNQTSRNPSQRSYNSIKCSNTSNNSTPVPAQPED-ESFPS--PYPN 65
             ++  ++ L    +SKN     P +   NS     T+  ST   + PE  + F +  P P 
Sbjct:     1 MASTSTLLLPSLSSKNLHIAVPIRT--NSF-VRRTTKFSTKCSSNPESKDQFINLTPAPE 57

Query:    66 SIATESSDTFPIEKRRKSEILRERRARTGLVKPEPPNFEVGWKRTKEISLEKPIGFVIMD 125
             SI T S++ FPIEKRR+SEI+R+R  R G+ KPEPPNFE+GWKRTKEI+LEKP G+VIMD
Sbjct:    58 SINTTSAEKFPIEKRRRSEIIRDRTQR-GIEKPEPPNFEIGWKRTKEINLEKPKGYVIMD 116

Query:   126 FLEKLQGLMERDYGSTALLAKVGXXXXXXXXXXXXXXXDEGKVEERMVTELSRVLRLMEM 185
             FLEK + LM R++GS  LLAK G               DEGKVEERMVTEL RVL+LMEM
Sbjct:   117 FLEKFEALMAREFGSKELLAKAGEIVAERAREEAEVLRDEGKVEERMVTELFRVLKLMEM 176

Query:   186 DMAMVKAAVKEETLSERLEQAKARCRQAILVANSF 220
             D+AMVKA+VK+ETLS+R+EQA+ARCRQAILVANSF
Sbjct:   177 DLAMVKASVKDETLSQRIEQARARCRQAILVANSF 211


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.128   0.358    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      220       205   0.00096  111 3  11 23  0.39    33
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  144 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.83u 0.12s 23.95t   Elapsed:  00:00:02
  Total cpu time:  23.83u 0.12s 23.95t   Elapsed:  00:00:02
  Start:  Sat May 11 04:51:30 2013   End:  Sat May 11 04:51:32 2013

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