BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027689
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96AB6|NTAN1_HUMAN Protein N-terminal asparagine amidohydrolase OS=Homo sapiens
GN=NTAN1 PE=1 SV=3
Length = 310
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 60 PSKYVYVFQREYATVDP--ALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEI-VDI 116
P +YV QRE A P + +G+D+ATTC +V+R+ N T + H D + ++
Sbjct: 43 PQGLLYVQQRELAVTSPKDGSISILGSDDATTCHIVVLRHTGNGATCLTHCDGTDTKAEV 102
Query: 117 GLC-QMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVD 175
L + DH L+V+L+GGF SD S L +L+
Sbjct: 103 PLIMNSIKSFSDHAQCGRLEVHLVGGF-----------------SDDRQLSQKLTHQLLS 145
Query: 176 TLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLCKI 215
R+++ H+ TL V N + +++ N +P+ +G I
Sbjct: 146 EFDRQEDDIHLVTLCVTELNDREENE-NHFPVIYGIAVNI 184
>sp|Q28955|NTAN1_PIG Protein N-terminal asparagine amidohydrolase OS=Sus scrofa GN=NTAN1
PE=1 SV=3
Length = 310
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 60 PSKYVYVFQREYATVDP--ALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEI---V 114
P +YV QRE A P V +G+D+ATTC +V+R+ N T + H D + V
Sbjct: 43 PQGLLYVQQRELAVTSPKDGSVCILGSDDATTCHIVVLRHTGNGATCLTHCDGTDTKAEV 102
Query: 115 DIGLCQMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLV 174
+ + + S DH L V+L+GGF SD S L +L+
Sbjct: 103 SLIMSSIKSF-SDHTQRGRLGVHLVGGF-----------------SDDRQLSQKLTHQLL 144
Query: 175 DTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLCKI 215
R+++ H+ TL V N + +++ N +PI +G +
Sbjct: 145 SEFDRQEDDIHLVTLCVTELNDREENE-NHFPIIYGIAVNV 184
>sp|Q64311|NTAN1_MOUSE Protein N-terminal asparagine amidohydrolase OS=Mus musculus
GN=Ntan1 PE=2 SV=3
Length = 310
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 60 PSKYVYVFQREYATVDP--ALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEI---V 114
P +YV QRE A P + +G+D+ATTC +V+R+ N T + H D + V
Sbjct: 43 PQGLLYVQQRELAVTSPKDGSISILGSDDATTCHIVVLRHTGNGATCLTHCDGSDTKAEV 102
Query: 115 DIGLCQMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLV 174
+ + + S +H L+V+L+GGF SD S L +L+
Sbjct: 103 PLIMSSIKSF-SEHAECGRLEVHLVGGF-----------------SDDRQLSQKLTHQLL 144
Query: 175 DTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLCKI 215
++ + H+ TL V N + +++ N +PI +G I
Sbjct: 145 SEFDKQDDDIHLVTLCVTELNDREENE-NHFPIIYGIAVNI 184
>sp|Q96S66|CLCC1_HUMAN Chloride channel CLIC-like protein 1 OS=Homo sapiens GN=CLCC1 PE=1
SV=1
Length = 551
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 20/83 (24%)
Query: 137 YLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNT 196
Y I G D SP+ + ISECY +D L K+ + ++++E +
Sbjct: 46 YGISGEKDVSPDLSCADEISECYHKLDS----LTYKIDECEKKKREDY------------ 89
Query: 197 KRDSQGNAYPIFHGFLCKILLNG 219
+SQ N P+F +L KIL+
Sbjct: 90 --ESQSN--PVFRRYLNKILIEA 108
>sp|P47599|ACKA_MYCGE Acetate kinase OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 /
NCTC 10195) GN=ackA PE=3 SV=1
Length = 393
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 74 VDPALVDYVGTDEATTCVGLVIR-NRRNRMTSIAH-------MDNPEIVDIGLCQMLSLV 125
+DPA+V Y+ + +C +V N+++ M +I D PEI DI + ++ V
Sbjct: 241 IDPAIVSYIAEQQKLSCNDVVNELNKKSGMFAITGSSDMRDIFDKPEINDIAIKMYVNRV 300
Query: 126 VDH------DLDAELDVYLIGG 141
D+ L E+D + G
Sbjct: 301 ADYIAKYLNQLSGEIDSLVFTG 322
>sp|C3MVH6|SYI_SULIM Isoleucine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=ileS PE=3 SV=1
Length = 1049
Score = 32.0 bits (71), Expect = 3.5, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 25 DILVALLE-HPVLVSASHSFKSMEETKVSVSSETPSPSKYVYVFQREYATVDPALVDYVG 83
D+L++LL + +S FKS + KV P+ S + +EY ++ P ++DY+
Sbjct: 851 DVLLSLLNAKDIEISKIEGFKSFSKYKVE-----PNRS----IIGKEYKSMSPKILDYIR 901
Query: 84 TDEATTCVGLVIRNRRNRMTSIAHMDNPEIV 114
+ + ++ N+ +A +DN +++
Sbjct: 902 NNSDIIAIDIL-----NKKQHVARIDNVDVI 927
>sp|C3N5S5|SYI_SULIA Isoleucine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.27)
GN=ileS PE=3 SV=1
Length = 1049
Score = 32.0 bits (71), Expect = 3.5, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 25 DILVALLE-HPVLVSASHSFKSMEETKVSVSSETPSPSKYVYVFQREYATVDPALVDYVG 83
D+L++LL + +S FKS + KV P+ S + +EY ++ P ++DY+
Sbjct: 851 DVLLSLLNAKDIEISKIEGFKSFSKYKVE-----PNRS----IIGKEYKSMSPKILDYIR 901
Query: 84 TDEATTCVGLVIRNRRNRMTSIAHMDNPEIV 114
+ + ++ N+ +A +DN +++
Sbjct: 902 NNSDIIAIDIL-----NKKQHVARIDNVDVI 927
>sp|P52463|UL32_HHV6U Packaging protein UL32 OS=Human herpesvirus 6A (strain Uganda-1102)
GN=U36 PE=3 SV=1
Length = 484
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 18/126 (14%)
Query: 44 KSMEETKVSVSSETPSPSKYVYVFQREYATVDPALVDYVGTDEATTCVGLVIRNRR--NR 101
K++ + + S S + + +VY+ R+ TV G + C L + N + N
Sbjct: 348 KAIFDNEFSFSDDNFTLDTHVYLILRQTGTV--------GVYKHFFCDPLCLANCKTINP 399
Query: 102 MTSIAHMDNPEIVD--IGLC---QMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTIS 156
D EI D + +C + LS+V H L ++L F PNH N T I+
Sbjct: 400 EVLFNTTDAGEIQDLKVTICYRNEYLSIVEKH---VWLAIHLFKAFQIIKPNHKNKTQIT 456
Query: 157 ECYSDM 162
E D
Sbjct: 457 EFLKDF 462
>sp|Q92JD3|Y134_RICCN Uncharacterized protein RC0134 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=RC0134 PE=4 SV=1
Length = 165
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 27/106 (25%)
Query: 59 SPSKYVYVFQREYATVDPALV------------DYVGTDEATTCVGLVIRNRRNRMTSIA 106
S ++Y Y + + VD V + +GTD CV +++ + + T++A
Sbjct: 19 SIAQYAYSYSLQQGIVDYEAVRVEQHKVGFSDQEKIGTDNIQQCVAVILHDPLTKKTALA 78
Query: 107 HMDNPEIVDIGLCQMLSLVVDHDL------DAELDVYLIGGFDDAS 146
H+D SL HD+ + +L+ YL+GG D ++
Sbjct: 79 HVDR-------FTYAGSLT--HDVISNFPPNTQLEAYLVGGRDRSA 115
>sp|Q0IEW8|KTU_AEDAE Protein kintoun OS=Aedes aegypti GN=AAEL007767 PE=3 SV=1
Length = 898
Score = 30.4 bits (67), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 27 LVALLEHPVLVSASHSFKSMEETKVSVSSETPSPSKYVYVFQREYATVDPALVDYVGTDE 86
LV ++E P+L SA+ ++ ++V + S+ SP+KY + Y ++ TDE
Sbjct: 280 LVLVIELPLLKSANQCTLNVTSSEVHLISD--SPAKYKLEVKLPYTVLEKNGSAKFNTDE 337
Query: 87 ATTCVGL-VIRNRR 99
T V L V RNRR
Sbjct: 338 TTLTVLLPVARNRR 351
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,963,421
Number of Sequences: 539616
Number of extensions: 3355130
Number of successful extensions: 8746
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8737
Number of HSP's gapped (non-prelim): 14
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)