BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027698
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KIP8|HACD2_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Bos taurus GN=PTPLB PE=2 SV=2
Length = 254
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 9/215 (4%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGAC 130
PS V L +Q R + +VQ S+ + +AW + E+IRY FY + +
Sbjct: 101 PSSVVLTSIQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL 160
Query: 131 PHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNV 184
P+ + + RYT+FI LYP+GV GE+L + A P++++ +++ LP F YY
Sbjct: 161 PYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYS---ISLPNKYNFSFDYYAF 217
Query: 185 VQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 219
+ ++ + Y + +LY HM+ QR L +E KK
Sbjct: 218 LILIMISYIPLFPQLYFHMIHQRRKILSHTEEHKK 252
>sp|Q5RBK3|HACD2_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Pongo abelii GN=PTPLB PE=2 SV=1
Length = 255
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 9/215 (4%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 42 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 101
Query: 71 PSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGAC 130
PS V L Q R + +VQ S+ + +AW + E+IRY FY + +
Sbjct: 102 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL 161
Query: 131 PHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNV 184
P+ + + RYT+FI LYP+GV GE+L + A P++++ +++ LP F YY
Sbjct: 162 PYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYS---ISLPNKYNFSFDYYAF 218
Query: 185 VQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 219
+ ++ + Y + +LY HM+ QR L +E KK
Sbjct: 219 LILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKK 253
>sp|Q6Y1H2|HACD2_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Homo sapiens GN=PTPLB PE=1 SV=1
Length = 254
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 9/215 (4%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGAC 130
PS V L Q R + +VQ S+ + +AW + E+IRY FY + +
Sbjct: 101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL 160
Query: 131 PHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNV 184
P+ + + RYT+FI LYP+GV GE+L + A P++++ +++ LP F YY
Sbjct: 161 PYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYS---ISLPNKYNFSFDYYAF 217
Query: 185 VQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 219
+ ++ + Y + +LY HM+ QR L +E KK
Sbjct: 218 LILIMISYIPIFPQLYFHMIHQRRKILSHTEEHKK 252
>sp|Q9D3B1|HACD2_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 2 OS=Mus musculus GN=Ptplb PE=2 SV=1
Length = 254
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 9/215 (4%)
Query: 11 YLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGIL 70
YL YN + AGW+V L+ L+ S + S + QT A LE++H A+GI+
Sbjct: 41 YLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIERPLKFFQTGALLEILHCAIGIV 100
Query: 71 PSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGAC 130
PS V L Q R + +VQ S+ + +AW + E+IRY FY + +
Sbjct: 101 PSSVVLTSFQVMSRVFLIWAVTHSVKEVQSEDSVLLFVIAWTITEIIRYSFYTFSLLNHL 160
Query: 131 PHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FSYYNV 184
P+ + + RYT+FI LYP+GV GE+L + A P++++ +++ LP F Y+
Sbjct: 161 PYIIKWARYTLFIVLYPMGVTGELLTIYAALPFVRQAGLYS---ISLPNKYNFSFDYHAF 217
Query: 185 VQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 219
+ ++ + Y + +LY HM+ QR L +E KK
Sbjct: 218 LILIMISYIPLFPQLYFHMIHQRRKVLSHTEEHKK 252
>sp|Q9QY80|HACD1_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Mus musculus GN=Ptpla PE=2 SV=1
Length = 281
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 3/196 (1%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LEVVH +GI+P+ V
Sbjct: 72 YNIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEVVHCLIGIVPTSV 131
Query: 75 WLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWL 134
+ +Q R + I +Q+ S+ + ++W + E+ RY FY + + PH++
Sbjct: 132 LVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEITRYSFYTFSLLDHLPHFI 191
Query: 135 TYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVM 191
+ RY +FI LYP+GV GE+L + A PY+K+ +F+ + F YY + +
Sbjct: 192 KWARYNLFIILYPVGVAGELLTIYAALPYVKKSGMFSVRLPNKYNVSFDYYYFLLITMAS 251
Query: 192 YPFAWIKLYSHMLKQR 207
Y + +LY HML+QR
Sbjct: 252 YIPLFPQLYFHMLRQR 267
>sp|Q4W1W1|HACD1_CANFA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Canis familiaris GN=PTPLA PE=2 SV=1
Length = 249
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 5/197 (2%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 40 YNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 99
Query: 75 WLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWL 134
+ +Q R + I +Q+ S+ + +AW + E+ RY FY + + P+++
Sbjct: 100 IVAGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFI 159
Query: 135 TYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFA----NFFAGLPFSYYNVVQVVFV 190
+ RY FI LYP+GV+GE+L + A PY+K+ +F+ N + + F YY + +
Sbjct: 160 KWARYNFFIILYPVGVVGELLTIYAALPYVKKTGMFSIRLPNKY-NVSFDYYYFLLITMA 218
Query: 191 MYPFAWIKLYSHMLKQR 207
Y + +LY HML+QR
Sbjct: 219 SYIPLFPQLYFHMLRQR 235
>sp|Q9N1R5|HACD1_SHEEP Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Ovis aries GN=PTPLA PE=2 SV=1
Length = 288
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 5/197 (2%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 79 YNIAMTAGWLVLAIAMVRFYMEKGTHKGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 138
Query: 75 WLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWL 134
+ +Q R + I +Q+ S+ + +AW + E+ RY FY + + P+++
Sbjct: 139 LVAGVQVSSRIFMVWLVTHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFI 198
Query: 135 TYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFA----NFFAGLPFSYYNVVQVVFV 190
+ RY FI LYP+GV GE+L + A PY+K+ +F+ N + + F YY + +
Sbjct: 199 KWARYNFFIILYPVGVAGELLTIYAALPYVKKTGMFSIRLPNKY-NVSFDYYYFLLITMA 257
Query: 191 MYPFAWIKLYSHMLKQR 207
Y + +LY HML+QR
Sbjct: 258 SYIPLFPQLYFHMLRQR 274
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 11/217 (5%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQLLGFSWIFVNLTVRFFILGKESFYDTFHNVADMMYFCQMLALVETLNAA 206
Query: 67 VGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNT 126
+G+ + V +Q+ GR + + ++Q+ +F F +W IE+ RYPFY L+
Sbjct: 207 IGVTSTPVLPALIQFLGRNFILFLVFGTMEEMQNKAVVFFVFYSWSAIEIFRYPFYMLSC 266
Query: 127 IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FS 180
I LT+LRYTM+IPLYP+G L E + + Q+ P E F+ F P FS
Sbjct: 267 IDMDWKVLTWLRYTMWIPLYPLGCLSEAVAVIQSIPVFNESGRFS-FTLPYPVKMKVRFS 325
Query: 181 YYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEK 217
++ +QV VM + H+ KQR + G++++K
Sbjct: 326 FF--LQVYLVMLFLGLYINFRHLYKQRRRRYGQKKKK 360
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 5/203 (2%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K +LF YN +Q G WI + +L S TF + ++++ Q A +EV++ A
Sbjct: 144 KGFLFMYNLVQFLGYSWIFVNMTVRLFILGQDSFYDTFHTIADVMYFCQMLAIMEVINPA 203
Query: 67 VGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNT 126
VG++ +GV F+Q GR V + +Q+ P +F F W IE+ RYPFY L
Sbjct: 204 VGLVKTGVMPAFIQVMGRNFILFVIFGSLEDMQNKPVVFFVFYLWSTIEIFRYPFYMLAC 263
Query: 127 IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFF---AGLPFSYYN 183
I LT+LRYT+++PLYP+GVL E + + Q+ P E + + GL S+
Sbjct: 264 IDTEWKLLTWLRYTIWMPLYPLGVLAEAVAVIQSIPIFDETKLLSIPLPKATGLSLSFSY 323
Query: 184 VVQVVFVMYPFAWIKLYSHMLKQ 206
++Q+ V+ + H+ KQ
Sbjct: 324 ILQLYLVVMFLGLFINFRHLFKQ 346
>sp|B0YJ81|HACD1_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 1 OS=Homo sapiens GN=PTPLA PE=1 SV=1
Length = 288
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 3/196 (1%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
Y+ AGW+V ++ + + G + S + + QT A LE+VH +GI+P+ V
Sbjct: 79 YDIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTFALLEIVHCLIGIVPTSV 138
Query: 75 WLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWL 134
+ +Q R + I +Q+ S+ + +AW + E+ RY FY + + P+++
Sbjct: 139 IVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVAWTVTEITRYSFYTFSLLDHLPYFI 198
Query: 135 TYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYYNVVQVVFVM 191
+ RY FI LYP+GV GE+L + A P++K+ +F+ + F YY + +
Sbjct: 199 KWARYNFFIILYPVGVAGELLTIYAALPHVKKTGMFSIRLPNKYNVSFDYYYFLLITMAS 258
Query: 192 YPFAWIKLYSHMLKQR 207
Y + +LY HML+QR
Sbjct: 259 YIPLFPQLYFHMLRQR 274
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 149 KGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAA 208
Query: 67 VGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNT 126
+G+ S V +Q GR + + ++Q+ +F F W IE+ RY FY L
Sbjct: 209 IGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTC 268
Query: 127 IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FS 180
I LT+LRYT++IPLYP+G L E + + Q+ P E F+ F P FS
Sbjct: 269 IDMDWEVLTWLRYTLWIPLYPLGCLAEAVSVVQSIPIFNETGRFS-FTLPYPVKIKVRFS 327
Query: 181 YYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEK 217
++ +Q+ +M + H+ KQR + G++++K
Sbjct: 328 FF--LQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKK 362
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAA 206
Query: 67 VGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNT 126
+G+ S V +Q GR + + ++Q+ +F F W IE+ RY FY L
Sbjct: 207 IGVTTSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTC 266
Query: 127 IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FS 180
I LT+LRYT++IPLYP+G L E + + Q+ P E F+ F P FS
Sbjct: 267 IDMDWKVLTWLRYTLWIPLYPLGCLAEAVSVIQSIPIFNETGRFS-FTLPYPVKIKVRFS 325
Query: 181 YYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEK 217
++ +Q+ +M + H+ KQR + G++++K
Sbjct: 326 FF--LQIYLIMIFLGLYINFRHLYKQRRRRYGQKKKK 360
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YLF YN +Q G WI + +L +S TF + ++++ Q A +E ++ A
Sbjct: 147 KGYLFMYNLVQFLGFSWIFVNMTVRFFILGKESFYDTFHTVADMMYFCQMLAAVESINAA 206
Query: 67 VGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNT 126
+G+ S V Q GR + + ++Q+ +F F W +E+ RYPFY L+
Sbjct: 207 IGVTKSPVVPSLFQLLGRNFILFIIFGTMEEMQNKAVVFFVFYIWSTVEIFRYPFYMLSC 266
Query: 127 IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLP------FS 180
I LT+LRYT++IPLYP+G L E + + Q+ P E F+ F P FS
Sbjct: 267 IDMDWKVLTWLRYTVWIPLYPMGCLAEAVSVIQSIPVFNETGRFS-FTLPYPVKIKVRFS 325
Query: 181 YYNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEK 217
++ +Q+ ++ + ++ KQR + G++++K
Sbjct: 326 FF--LQIYLILLFLGLYVNFRYLYKQRRRRFGQKKKK 360
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 9 KLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGA 66
K YL YN +Q G WI + +L S TF + ++++ QT A +E+++
Sbjct: 147 KGYLIMYNLVQFLGFSWIFVNMTVRLFILGKDSFYDTFHTIADMMYFCQTLALMEILNSL 206
Query: 67 VGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNT 126
+G++ S + +Q GR V + ++Q +F F W +IE+ RYP+Y L+
Sbjct: 207 IGLVRSPLIPAVIQVFGRNFILFVVLGSLEEMQSKAVVFFLFYFWSIIELFRYPYYMLSC 266
Query: 127 IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQ 186
+G LT+LRYT +IPLYP+G L E + L Q+ P E F+ GLP +Q
Sbjct: 267 MGIEWKPLTWLRYTSWIPLYPLGGLAEAVCLIQSIPIFSETGKFS---LGLPNPLNVTIQ 323
Query: 187 VVFV--MYPFA-WIKL---YSHMLKQRGSKLGKRQEKKK 219
F+ MY A ++ L + ++ KQR LG ++ K K
Sbjct: 324 FSFLLQMYLIALFLGLFVNFRYLYKQRKQHLGPKKRKMK 362
>sp|O17040|HACD_CAEEL Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase hpo-8 OS=Caenorhabditis elegans GN=hpo-8
PE=3 SV=2
Length = 218
Score = 93.6 bits (231), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 8/218 (3%)
Query: 8 IKLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAV 67
++ YL YN LQ GW + + L + + + S + I QTAA LEV+H V
Sbjct: 3 VQTYLVAYNVLQILGWSAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIV 62
Query: 68 GILPSGVWLPFMQWCGRTLFF--LVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALN 125
G++ S V MQ R + ++ C + L + +AW + EVIRY FYAL+
Sbjct: 63 GLVRSPVGTTAMQVTSRVVLVWPILHLCSTARFSIGVPLLL--VAWSVTEVIRYSFYALS 120
Query: 126 TIGA-CPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSY 181
+ P++L YLRYT+F LYP+GV GE+L L + + EK I + S+
Sbjct: 121 VLKQPIPYFLLYLRYTLFYVLYPMGVSGELLTLFASLNEVDEKKILTLEMPNRLNMGISF 180
Query: 182 YNVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKK 219
+ V+ + + Y + +LY +M+ QR LG +KK+
Sbjct: 181 WWVLIIAALSYIPGFPQLYFYMIGQRKKILGGGSKKKQ 218
>sp|Q5VWC8|HACD4_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Homo sapiens GN=PTPLAD2 PE=1 SV=1
Length = 232
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 11 YLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
YLF Y +Q G WI + S+ TF + G ++ + Q+ + LE++H VG
Sbjct: 19 YLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVG 78
Query: 69 ILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTIG 128
I + + F+Q R + V +VQ+ + + F+ W L++++RY + L+ IG
Sbjct: 79 IESNHLLPRFLQLTERIIILFVVITSQEEVQEKYVVCVLFVFWNLLDMVRYTYSMLSVIG 138
Query: 129 ACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFS---YYNVV 185
LT+L T+++P+YP+ VL E + Q+ PY + F + LPF Y+ V
Sbjct: 139 ISYAVLTWLSQTLWMPIYPLCVLAEAFAIYQSLPYFES---FGTYSTKLPFDLSIYFPYV 195
Query: 186 QVVFVMYPFAWIKL-YSHMLKQRGSKLGKRQEKKKK 220
+++M F + YSH+ +R LG KKKK
Sbjct: 196 LKIYLMMLFIGMYFTYSHLYSERRDILGIFPIKKKK 231
>sp|Q8VZB2|PAS2_ARATH Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2 OS=Arabidopsis thaliana GN=PAS2
PE=1 SV=1
Length = 221
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 5/213 (2%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
++YL YN + AGW +++ ++ L T + + + + + QTAA LE++HG VG
Sbjct: 10 RVYLTLYNWIVFAGWAQVLYLAITTLKET-GYENVYDAIEKPLQLAQTAAVLEILHGLVG 68
Query: 69 ILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYAL-NTI 127
++ S V Q R +V+ H + ++W + E+IRY F+ +
Sbjct: 69 LVRSPVSATLPQIGSRLFLTWGILYSFPEVRSHFLVTSLVISWSITEIIRYSFFGFKEAL 128
Query: 128 GACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGL---PFSYYNV 184
G P W +LRY+ F+ LYP G+ E+ L+ A P++K +++ + F ++
Sbjct: 129 GFAPSWHLWLRYSSFLLLYPTGITSEVGLIYLALPHIKTSEMYSVRMPNILNFSFDFFYA 188
Query: 185 VQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEK 217
+V +Y +Y +ML QR L K + +
Sbjct: 189 TILVLAIYVPGSPHMYRYMLGQRKRALSKSKRE 221
>sp|Q5ZEJ0|PAS2B_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2B OS=Oryza sativa subsp.
japonica GN=PAS2B PE=2 SV=1
Length = 221
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 17/209 (8%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
+LYL YN GW ++ ++ LL + A +A+ + QTAAFLE++HG VG
Sbjct: 10 RLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEA-VYAAVERPLQFAQTAAFLEILHGLVG 68
Query: 69 ILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFL--AWCLIEVIRYPFYAL-N 125
++ S V Q R FL + H + +T L +W + E+IRY F+ +
Sbjct: 69 LVRSPVSATLPQIGSR--LFLTWGILWSFPETHSHILVTSLVISWSITEIIRYSFFGMKE 126
Query: 126 TIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFA-------NFFAGLP 178
T G P WL +LRY+ F+ LYP G+ E+ L+ A PYMK + NF
Sbjct: 127 TFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWNF--SFD 184
Query: 179 FSYYNVVQVVFVMYPFAWIKLYSHMLKQR 207
FSY +++ + +Y ++++ML QR
Sbjct: 185 FSYASILSL--AVYVPGSPHMFTYMLAQR 211
>sp|A2AKM2|HACD4_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Mus musculus GN=Ptplad2 PE=2 SV=2
Length = 232
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 13/224 (5%)
Query: 5 RQPIKLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEV 62
R +YLF Y +Q G WI+A + S+A TF + G ++ + Q+ + LE+
Sbjct: 13 RYRKNVYLFIYYLIQFCGHSWILANMTVRFFSFGKDSMADTFYAIGLVMRVCQSISLLEL 72
Query: 63 VHGAVGILPSGVWLPFMQWCGRT--LFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYP 120
+H +GI + ++ F+Q R LF ++T+ E +VQ+ + + F+ W L++++RY
Sbjct: 73 LHIYIGIESNQLFPRFLQLTERVIILFGVITSQE--EVQEKCVVCVLFILWNLLDMVRYT 130
Query: 121 FYALNTIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFS 180
+ L+ IG LT+L T+++P+YP+ VL E + Q+ PY + F LPF
Sbjct: 131 YSMLSVIGTSYAALTWLSQTLWMPIYPLCVLAEAFTIYQSLPYFES---FGTNSTVLPFD 187
Query: 181 YYN----VVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKKK 220
V+++ +M YSH+ +R L K+K
Sbjct: 188 LSTCFPYVLKLYLMMLFIGMYFTYSHLYTERKDFLRVFSVKQKN 231
>sp|Q7XSZ4|PAS2A_ORYSJ Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PASTICCINO 2A OS=Oryza sativa subsp.
japonica GN=PAS2A PE=2 SV=2
Length = 221
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 9 KLYLFGYNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
+LYL YN GW ++ ++ LL + A +A+ + QTAAFLE++HG VG
Sbjct: 10 RLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEA-VYAAVERPLQFAQTAAFLEILHGLVG 68
Query: 69 ILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFL--AWCLIEVIRYPFYAL-N 125
++ S V Q R FL + H + +T L +W + E+IRY F+ +
Sbjct: 69 LVRSPVSATLPQIGSR--LFLTWGILWSFPETHSHILVTSLVISWSITEIIRYSFFGMKE 126
Query: 126 TIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKN 168
G P WL +LRY+ F+ LYP G+ E+ L+ A PYMK
Sbjct: 127 AFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKASE 169
>sp|O14346|HACD_SCHPO Probable very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC19C2.15c PE=3 SV=2
Length = 208
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 24 IVAIFMLLSNLLST-------KSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGVWL 76
+++ F+ +S LL T K A F ++ +QT A EV H G++ S
Sbjct: 15 VISCFLWMSVLLRTGLIWGITKDTAVVFHETNTLVRWVQTLAIAEVFHSIFGLVSSSPLT 74
Query: 77 PFMQWCGRTLFFLVTACEIVQ--VQDHPSLFITFLAWCLIEVIRYPFYALNTIGACPHWL 134
+Q R L+ + C ++ P +AW + E+IRY FYA N G P +L
Sbjct: 75 TIIQVASR-LYLVWGVCYPFSYVIEGSPIYLSMIIAWSITEIIRYAFYAFNLNGDIPAFL 133
Query: 135 TYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVVQVVFVMYPF 194
T+LRY F+ LYPIG E LL+ ++ I A + L + ++ + YP
Sbjct: 134 TWLRYNTFLILYPIGAGSEFLLVLKS-------RIAAQYVWSLNKLLWPILMSI---YPP 183
Query: 195 AWIKLYSHMLKQRGSKLGKRQEKKK 219
+Y+HML QR K+ KR ++
Sbjct: 184 GLYIMYTHMLAQR-RKISKRAAARR 207
>sp|Q0P5C7|HACD4_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 4 OS=Bos taurus GN=PTPLAD2 PE=2 SV=1
Length = 231
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 13/217 (5%)
Query: 11 YLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVG 68
YLF Y +Q G WI + S+ TF + G ++ + Q+ + LE++H VG
Sbjct: 19 YLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMQLCQSISLLELLHIYVG 78
Query: 69 ILPSGVWLPFMQWCGR--TLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNT 126
I + + +Q R LF ++T+ E +VQ+ + + F+ L++++RY + L+
Sbjct: 79 IESNHLLPRILQLTERIIVLFMVITSQE--EVQEKYVVCVLFIFRNLLDMVRYTYSMLSV 136
Query: 127 IGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFAGLPFS---YYN 183
IG LT+ T+++P+YP+ VL E + Q+ PY + F + LPF Y+
Sbjct: 137 IGISYAVLTWFSQTLWMPIYPLCVLAEAFTIYQSLPYFES---FGTYSTKLPFDLSFYFP 193
Query: 184 VVQVVFVMYPFAWIKL-YSHMLKQRGSKLGKRQEKKK 219
V +++M F + Y+H+ +R L KKK
Sbjct: 194 YVLKIYLMMLFVGMYFTYNHLYSERRDILRVFPNKKK 230
>sp|Q6GNB5|HACD_XENLA Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Xenopus laevis GN=ptplad2 PE=2 SV=1
Length = 218
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 5/218 (2%)
Query: 8 IKLYLFGYNSLQAAG--WIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHG 65
+K YL Y +Q G WI + A TF S G ++ Q + LE+ H
Sbjct: 1 MKTYLSIYYLIQFCGHSWIFTNMTTRFLFFGQDAFADTFYSIGLVMQGCQLLSILELAHI 60
Query: 66 AVGILPSGVWLPFMQWCGRTLFFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALN 125
+G+ +G F+Q R + V +VQ + F W L +VIRYP+ L
Sbjct: 61 LLGVEQNGFLPMFLQVAERFIILFVVITSQEEVQSKYIVCALFFIWNLWDVIRYPYDMLA 120
Query: 126 TIGACPHWLTYLRYTMFIPLYPIGVLGEMLLLNQAFPYMKEKNIFANFFA---GLPFSYY 182
+ LT+LR+T +I YP+ VL E + ++ PY + ++ A L F +
Sbjct: 121 AVDTDYSALTWLRHTWWIVAYPLSVLAEAYTIYESLPYFESLGTYSFKMALPVSLSFHFP 180
Query: 183 NVVQVVFVMYPFAWIKLYSHMLKQRGSKLGKRQEKKKK 220
++ + V+ P + + S + +R ++ + KK
Sbjct: 181 YILTLYLVLQPVGMLYICSCLWSERKQYFQRKLKLKKN 218
>sp|P40857|PHS1_YEAST Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase PHS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PHS1 PE=1 SV=1
Length = 217
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 15 YNSLQAAGWIVAIFMLLSNLLSTKSIAGTFASAGEIIWILQTAAFLEVVHGAVGILPSGV 74
YN L A GW +++++S L F + ++Q A +E+++ +G++ S +
Sbjct: 15 YNLLSAVGWSYLLYLVIS-LYPKVGQPAFFYQTKNVATLVQCGAIIEIINSFLGVVRSPL 73
Query: 75 WLPFMQWCGRTL-----FFLVTACEIVQVQDHPSLFITFLAWCLIEVIRYPFYALNTI-- 127
Q R L F L+ VQ + SL LAW + E++RY +Y +
Sbjct: 74 LTTVAQVSSRLLVVLGIFQLLPNTSGVQSVVYISLL---LAWSITEIVRYLYYFFMLVFK 130
Query: 128 GACPHWLTYLRYTMFIPLYPIGVLGEM 154
P L LRY +F LYP GV E+
Sbjct: 131 NGAPKILILLRYNLFWILYPTGVASEL 157
>sp|Q49460|Y468_MYCGE Uncharacterized ABC transporter permease MG468 OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=MG468 PE=3 SV=3
Length = 1783
Score = 37.7 bits (86), Expect = 0.068, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 102 PSLFIT--FLAWCLIEVIRYPFYALNTIGA--CPHWLTYLRYTMFIP------LYPIGVL 151
P +FIT L ++E ++ F +L IG + ++ L T FIP L IGVL
Sbjct: 1667 PFIFITCVVLGISMLEEMKRIFISLKAIGYRDVQNLISLL--TFFIPAFVLALLISIGVL 1724
Query: 152 GEMLLLNQAFPYMKEKNIFANFFAGLPFSYYNVV--QVVFVMYPFAWIKLYSHMLKQ 206
+L+ QA + + N F LP+ V+ +FV+ + WIKL S LK+
Sbjct: 1725 AGVLIGIQAVVFNVAQVFLTNVFEFLPYMVGIVLFGVTIFVIGSYFWIKLRSAELKE 1781
>sp|P75109|Y684_MYCPN Uncharacterized ABC transporter permease MG468 homolog OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_684 PE=1
SV=1
Length = 1882
Score = 35.4 bits (80), Expect = 0.34, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 102 PSLFIT--FLAWCLIEVIRYPFYALNTIGACPHWLTYLRYTMFIP------LYPIGVLGE 153
P +FIT L ++E ++ F +L +IG FIP L I +L
Sbjct: 1766 PFIFITCVVLGISMLEEMKRIFISLKSIGYKDSQNLVSLLCFFIPAFVLSLLISIAILAG 1825
Query: 154 MLLLNQAFPYMKEKNIFANFFAGLPFSYYNVV--QVVFVMYPFAWIKLYSHMLKQ 206
+L+ QA + + N F LP+ V+ +FV+ + WIKL S LK+
Sbjct: 1826 LLVGVQALVFGVAQVFLTNVFEFLPYMVGIVLFGATIFVIGSYFWIKLRSAELKE 1880
>sp|Q6LMF5|FTSW_PHOPR Lipid II flippase FtsW OS=Photobacterium profundum GN=ftsW PE=3
SV=1
Length = 411
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 35 LSTKSIAGTFASAGEIIWI-LQTAAFLEVVHGAVGILPS-GVWLPFMQWCGRTLFFLVTA 92
L + + G F + G W QT L V A+G++P+ G+ LP + + G +LF + TA
Sbjct: 315 LQSGQLFGGFLACGFSFWFAFQT---LVNVGAAIGMVPTKGLTLPLISYGGSSLFIMATA 371
Query: 93 CEIVQVQDH 101
I+ DH
Sbjct: 372 VGILLRIDH 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.143 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,950,957
Number of Sequences: 539616
Number of extensions: 2978541
Number of successful extensions: 7113
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7063
Number of HSP's gapped (non-prelim): 31
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 59 (27.3 bits)