Query 027700
Match_columns 220
No_of_seqs 119 out of 514
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 23:45:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027700.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027700hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 1.2E-86 4.1E-91 572.3 20.5 207 4-213 6-212 (236)
2 3uzd_A 14-3-3 protein gamma; s 100.0 5.7E-86 1.9E-90 571.3 21.3 208 3-213 1-210 (248)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 9.9E-86 3.4E-90 572.3 21.5 208 3-213 28-235 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 4.8E-84 1.6E-88 556.6 21.2 208 3-213 2-209 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 4.8E-83 1.6E-87 557.0 21.2 207 4-213 6-214 (260)
6 2npm_A 14-3-3 domain containin 100.0 7.2E-83 2.5E-87 555.6 21.4 205 5-213 27-234 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 7.6E-82 2.6E-86 549.2 15.8 202 5-213 28-236 (268)
8 2o8p_A 14-3-3 domain containin 100.0 1.5E-79 5.2E-84 524.4 19.6 191 5-207 2-198 (227)
9 3u3w_A Transcriptional activat 95.5 0.84 2.9E-05 37.7 17.5 71 127-209 158-228 (293)
10 3edt_B KLC 2, kinesin light ch 95.5 0.7 2.4E-05 36.3 17.4 56 150-206 143-198 (283)
11 3vtx_A MAMA; tetratricopeptide 95.1 0.75 2.6E-05 34.6 17.6 164 7-206 6-170 (184)
12 3n71_A Histone lysine methyltr 94.8 0.22 7.5E-06 46.2 11.3 96 96-205 326-421 (490)
13 3qwp_A SET and MYND domain-con 94.3 0.21 7.2E-06 45.3 9.6 55 150-205 345-399 (429)
14 3qww_A SET and MYND domain-con 94.3 0.38 1.3E-05 43.9 11.3 96 96-205 315-410 (433)
15 4a1s_A PINS, partner of inscut 93.9 2.6 8.8E-05 35.6 19.8 189 7-208 49-254 (411)
16 3u4t_A TPR repeat-containing p 93.9 1.9 6.6E-05 34.0 14.9 54 152-206 197-250 (272)
17 3nf1_A KLC 1, kinesin light ch 93.8 2 7E-05 34.3 20.2 186 7-207 28-225 (311)
18 3edt_B KLC 2, kinesin light ch 93.6 0.59 2E-05 36.8 10.0 56 150-206 101-156 (283)
19 2qfc_A PLCR protein; TPR, HTH, 93.6 2.6 9E-05 34.6 17.1 76 120-207 151-226 (293)
20 3ulq_A Response regulator aspa 93.4 0.8 2.7E-05 39.1 11.2 73 122-207 101-173 (383)
21 3qww_A SET and MYND domain-con 92.8 0.23 7.9E-06 45.3 7.1 54 151-205 315-368 (433)
22 3ro2_A PINS homolog, G-protein 92.6 3.2 0.00011 33.0 19.6 188 7-207 6-213 (338)
23 3sf4_A G-protein-signaling mod 92.6 4 0.00014 33.9 20.4 188 7-207 10-217 (406)
24 3q15_A PSP28, response regulat 92.5 0.8 2.7E-05 39.1 9.9 75 121-208 98-172 (378)
25 3n71_A Histone lysine methyltr 92.1 0.31 1.1E-05 45.1 7.1 54 151-205 326-379 (490)
26 3hym_B Cell division cycle pro 91.6 4.5 0.00015 32.5 17.7 174 8-208 127-301 (330)
27 3ulq_A Response regulator aspa 91.3 6.1 0.00021 33.4 15.2 73 123-207 142-214 (383)
28 4g1t_A Interferon-induced prot 91.1 6.6 0.00023 33.8 14.3 51 150-205 350-400 (472)
29 3sf4_A G-protein-signaling mod 90.3 6.9 0.00024 32.4 17.8 180 8-206 49-256 (406)
30 3qwp_A SET and MYND domain-con 90.1 0.33 1.1E-05 44.0 5.2 54 151-205 304-357 (429)
31 3ro2_A PINS homolog, G-protein 89.8 6.4 0.00022 31.2 15.4 54 150-207 199-253 (338)
32 3ro3_A PINS homolog, G-protein 89.7 3.6 0.00012 28.8 9.7 54 151-207 66-119 (164)
33 3ieg_A DNAJ homolog subfamily 89.7 7 0.00024 31.5 18.8 51 150-209 288-338 (359)
34 2y4t_A DNAJ homolog subfamily 89.4 9.1 0.00031 32.5 16.0 48 150-206 311-358 (450)
35 3u4t_A TPR repeat-containing p 89.0 4.5 0.00015 31.8 10.7 28 7-34 4-31 (272)
36 4a1s_A PINS, partner of inscut 88.9 9.5 0.00033 32.0 16.3 27 8-34 88-114 (411)
37 4abn_A Tetratricopeptide repea 88.7 13 0.00044 33.2 16.9 174 7-206 103-287 (474)
38 2xpi_A Anaphase-promoting comp 88.6 13 0.00043 33.0 19.2 49 150-207 532-580 (597)
39 4gcn_A Protein STI-1; structur 88.6 1.1 3.9E-05 32.4 6.3 48 150-206 24-71 (127)
40 3fp2_A TPR repeat-containing p 87.8 13 0.00044 32.3 16.2 51 150-209 444-494 (537)
41 3fp2_A TPR repeat-containing p 87.8 13 0.00045 32.3 14.3 55 150-207 394-458 (537)
42 3q15_A PSP28, response regulat 87.7 12 0.0004 31.7 16.1 55 150-208 238-292 (378)
43 4i17_A Hypothetical protein; T 87.1 8.8 0.0003 29.6 14.1 60 6-69 7-66 (228)
44 2ho1_A Type 4 fimbrial biogene 86.7 9.5 0.00032 29.5 15.4 57 8-69 39-95 (252)
45 1fch_A Peroxisomal targeting s 86.6 12 0.00041 30.6 15.6 59 6-69 98-156 (368)
46 2q7f_A YRRB protein; TPR, prot 85.8 10 0.00034 28.9 16.6 166 6-207 57-223 (243)
47 4b4t_Q 26S proteasome regulato 85.1 16 0.00056 30.8 17.2 55 150-206 191-245 (434)
48 4gyw_A UDP-N-acetylglucosamine 85.0 28 0.00094 33.5 15.5 57 7-68 10-66 (723)
49 3rkv_A Putative peptidylprolyl 84.7 1.4 4.9E-05 32.6 5.1 56 150-206 27-92 (162)
50 2gw1_A Mitochondrial precursor 84.7 18 0.00062 31.0 16.5 57 150-207 205-267 (514)
51 4eqf_A PEX5-related protein; a 83.9 17 0.00058 30.0 16.5 59 7-70 66-124 (365)
52 3gw4_A Uncharacterized protein 83.5 12 0.0004 27.8 10.1 73 122-207 64-137 (203)
53 2pl2_A Hypothetical conserved 83.4 14 0.00049 28.7 14.0 58 7-69 6-63 (217)
54 1xnf_A Lipoprotein NLPI; TPR, 83.0 15 0.0005 28.6 14.0 31 176-207 215-245 (275)
55 4eqf_A PEX5-related protein; a 82.5 19 0.00066 29.6 15.7 59 6-69 99-157 (365)
56 4gco_A Protein STI-1; structur 82.1 3.6 0.00012 29.7 6.3 46 151-205 30-75 (126)
57 4gcn_A Protein STI-1; structur 81.9 4 0.00014 29.4 6.5 54 150-205 58-111 (127)
58 1elr_A TPR2A-domain of HOP; HO 81.8 4.4 0.00015 27.5 6.4 56 150-207 54-109 (131)
59 2q7f_A YRRB protein; TPR, prot 81.7 15 0.00052 27.9 12.4 165 7-207 24-189 (243)
60 3qky_A Outer membrane assembly 81.5 18 0.00061 28.6 18.0 68 4-73 13-80 (261)
61 2y4t_A DNAJ homolog subfamily 80.8 25 0.00084 29.7 17.8 174 10-206 147-324 (450)
62 2vq2_A PILW, putative fimbrial 80.5 16 0.00054 27.3 16.7 59 7-70 9-67 (225)
63 3ieg_A DNAJ homolog subfamily 80.3 21 0.00072 28.6 18.0 61 6-71 3-63 (359)
64 4g1t_A Interferon-induced prot 80.0 3.5 0.00012 35.6 6.5 54 150-204 67-121 (472)
65 2pl2_A Hypothetical conserved 79.8 19 0.00066 27.9 19.1 47 6-56 39-85 (217)
66 2l6j_A TPR repeat-containing p 79.8 5.9 0.0002 26.4 6.5 50 151-209 21-70 (111)
67 3lf9_A 4E10_D0_1IS1A_001_C (T1 79.3 14 0.00047 28.1 8.6 89 20-113 11-103 (121)
68 3sz7_A HSC70 cochaperone (SGT) 79.1 11 0.00038 27.6 8.3 46 152-206 63-108 (164)
69 3hym_B Cell division cycle pro 79.0 22 0.00076 28.2 17.9 57 150-207 209-266 (330)
70 3nf1_A KLC 1, kinesin light ch 78.8 22 0.00075 28.0 19.4 184 8-206 71-307 (311)
71 2ifu_A Gamma-SNAP; membrane fu 78.4 27 0.00091 28.7 15.7 22 13-34 43-64 (307)
72 3ro3_A PINS homolog, G-protein 78.3 14 0.00049 25.5 16.6 55 150-207 105-159 (164)
73 2gw1_A Mitochondrial precursor 77.6 33 0.0011 29.3 16.0 175 7-208 305-480 (514)
74 1hz4_A MALT regulatory protein 77.5 7 0.00024 32.7 7.5 56 151-207 110-165 (373)
75 1fch_A Peroxisomal targeting s 77.2 28 0.00096 28.3 19.6 58 7-69 65-122 (368)
76 2dba_A Smooth muscle cell asso 77.1 6.5 0.00022 27.5 6.2 34 170-204 59-92 (148)
77 2ifu_A Gamma-SNAP; membrane fu 76.0 31 0.0011 28.3 13.6 51 150-204 171-222 (307)
78 1na3_A Designed protein CTPR2; 76.0 9.1 0.00031 24.4 6.3 49 150-207 25-73 (91)
79 1qqe_A Vesicular transport pro 75.6 31 0.0011 28.1 14.8 50 150-205 174-227 (292)
80 2xev_A YBGF; tetratricopeptide 75.5 11 0.00038 25.8 7.1 50 151-206 56-105 (129)
81 3cv0_A Peroxisome targeting si 75.2 29 0.00099 27.5 17.1 27 8-34 23-49 (327)
82 3u3w_A Transcriptional activat 75.1 22 0.00077 28.8 9.9 52 150-205 131-183 (293)
83 1qqe_A Vesicular transport pro 74.3 34 0.0012 27.8 14.9 55 150-208 134-189 (292)
84 3k9i_A BH0479 protein; putativ 74.1 9.3 0.00032 26.5 6.3 49 150-207 43-91 (117)
85 3ma5_A Tetratricopeptide repea 73.7 7.7 0.00026 26.4 5.7 49 150-207 23-71 (100)
86 2xpi_A Anaphase-promoting comp 72.9 49 0.0017 29.1 20.1 55 150-207 491-546 (597)
87 2kck_A TPR repeat; tetratricop 72.8 11 0.00037 24.6 6.2 50 151-209 23-72 (112)
88 3gyz_A Chaperone protein IPGC; 72.2 7.6 0.00026 29.4 5.8 48 150-206 86-133 (151)
89 2kc7_A BFR218_protein; tetratr 71.5 13 0.00045 24.4 6.4 49 151-207 17-65 (99)
90 3cv0_A Peroxisome targeting si 70.9 37 0.0013 26.8 15.8 29 6-34 55-83 (327)
91 2xev_A YBGF; tetratricopeptide 70.9 8.7 0.0003 26.4 5.5 50 151-206 19-68 (129)
92 2hr2_A Hypothetical protein; a 69.8 14 0.00047 29.0 6.9 54 150-205 27-85 (159)
93 2v5f_A Prolyl 4-hydroxylase su 69.6 22 0.00076 24.6 7.5 54 151-206 22-75 (104)
94 3k9i_A BH0479 protein; putativ 68.3 9 0.00031 26.5 5.1 51 151-207 7-57 (117)
95 3uq3_A Heat shock protein STI1 67.9 37 0.0013 25.7 17.5 56 7-68 6-61 (258)
96 3upv_A Heat shock protein STI1 67.8 15 0.00052 25.3 6.3 24 180-204 42-65 (126)
97 4gco_A Protein STI-1; structur 67.2 15 0.00052 26.2 6.3 48 150-206 63-110 (126)
98 1a17_A Serine/threonine protei 66.9 17 0.00057 25.8 6.5 49 151-208 64-112 (166)
99 2lni_A Stress-induced-phosphop 66.9 17 0.00058 24.6 6.3 50 151-209 67-116 (133)
100 3as5_A MAMA; tetratricopeptide 66.4 32 0.0011 24.4 16.5 163 8-206 10-173 (186)
101 1xi4_A Clathrin heavy chain; a 66.2 31 0.0011 36.7 10.3 30 182-211 1285-1316(1630)
102 1elw_A TPR1-domain of HOP; HOP 66.1 20 0.0007 23.4 6.5 50 151-209 55-104 (118)
103 1elr_A TPR2A-domain of HOP; HO 65.8 19 0.00064 24.1 6.3 50 150-208 20-69 (131)
104 1ihg_A Cyclophilin 40; ppiase 65.5 8.9 0.00031 33.3 5.5 57 150-207 239-303 (370)
105 3q49_B STIP1 homology and U bo 65.4 18 0.00062 25.0 6.3 15 190-204 56-70 (137)
106 3vtx_A MAMA; tetratricopeptide 64.9 17 0.00057 26.8 6.3 50 150-208 21-70 (184)
107 1xnf_A Lipoprotein NLPI; TPR, 64.7 39 0.0013 26.0 8.8 49 150-207 93-141 (275)
108 3upv_A Heat shock protein STI1 64.4 20 0.00067 24.7 6.3 48 151-207 55-102 (126)
109 3rkv_A Putative peptidylprolyl 63.9 38 0.0013 24.4 9.1 48 151-207 80-127 (162)
110 2kat_A Uncharacterized protein 63.5 22 0.00074 24.2 6.3 48 150-206 35-82 (115)
111 2fbn_A 70 kDa peptidylprolyl i 62.1 25 0.00085 26.5 7.0 50 151-206 55-117 (198)
112 2vyi_A SGTA protein; chaperone 61.6 25 0.00086 23.3 6.3 26 180-206 84-109 (131)
113 2vyi_A SGTA protein; chaperone 60.8 26 0.00091 23.2 6.3 22 12-33 18-39 (131)
114 1elw_A TPR1-domain of HOP; HOP 60.7 28 0.00094 22.7 6.3 51 150-209 20-70 (118)
115 2vgx_A Chaperone SYCD; alterna 60.7 20 0.00068 26.3 6.0 47 151-206 72-118 (148)
116 3uq3_A Heat shock protein STI1 59.7 54 0.0018 24.7 16.2 49 150-207 189-237 (258)
117 2yhc_A BAMD, UPF0169 lipoprote 59.6 58 0.002 25.1 18.9 65 7-73 5-69 (225)
118 4gfq_A Ribosome-recycling fact 59.3 27 0.00092 28.9 7.0 73 40-113 127-199 (209)
119 1a17_A Serine/threonine protei 59.2 26 0.00089 24.7 6.3 27 8-34 15-41 (166)
120 4ga2_A E3 SUMO-protein ligase 58.2 26 0.0009 25.5 6.3 47 151-206 48-94 (150)
121 1lyp_A CAP18; lipopolysacchari 57.8 23 0.00079 20.0 4.3 27 85-111 4-30 (32)
122 4gyw_A UDP-N-acetylglucosamine 57.6 1.3E+02 0.0046 28.7 13.8 132 6-206 43-174 (723)
123 1na0_A Designed protein CTPR3; 57.5 33 0.0011 22.5 6.3 26 180-206 81-106 (125)
124 3q49_B STIP1 homology and U bo 57.1 31 0.0011 23.7 6.3 48 151-207 60-107 (137)
125 2dba_A Smooth muscle cell asso 56.7 30 0.001 23.8 6.2 49 151-208 82-130 (148)
126 1na0_A Designed protein CTPR3; 56.6 35 0.0012 22.3 6.3 26 9-34 12-37 (125)
127 2hr2_A Hypothetical protein; a 55.8 23 0.00079 27.7 5.8 54 151-205 74-130 (159)
128 1p5q_A FKBP52, FK506-binding p 55.1 11 0.00039 31.8 4.2 56 150-206 163-225 (336)
129 2e2e_A Formate-dependent nitri 55.1 31 0.0011 25.2 6.3 50 151-209 98-147 (177)
130 1hh8_A P67PHOX, NCF-2, neutrop 53.7 32 0.0011 25.7 6.3 48 150-206 53-100 (213)
131 1kt0_A FKBP51, 51 kDa FK506-bi 53.7 22 0.00077 31.5 6.1 55 150-206 284-346 (457)
132 1w3b_A UDP-N-acetylglucosamine 53.4 94 0.0032 25.6 14.9 28 7-34 68-95 (388)
133 1dd5_A Ribosome recycling fact 53.3 44 0.0015 26.9 7.2 73 40-113 103-175 (185)
134 2c2l_A CHIP, carboxy terminus 52.7 30 0.001 28.2 6.4 25 180-205 76-100 (281)
135 1ya0_A SMG-7 transcript varian 52.6 56 0.0019 30.2 8.7 47 130-188 158-210 (497)
136 2lni_A Stress-induced-phosphop 52.5 18 0.00061 24.5 4.2 47 151-206 33-79 (133)
137 2fbn_A 70 kDa peptidylprolyl i 52.2 36 0.0012 25.6 6.3 47 151-206 105-151 (198)
138 1ise_A Ribosome recycling fact 51.7 46 0.0016 26.8 7.1 73 40-113 103-175 (185)
139 3urz_A Uncharacterized protein 51.4 36 0.0012 26.1 6.3 29 6-34 4-32 (208)
140 1is1_A Ribosome recycling fact 51.3 49 0.0017 26.7 7.1 73 40-113 103-175 (185)
141 2qfc_A PLCR protein; TPR, HTH, 51.1 36 0.0012 27.5 6.6 176 7-204 76-264 (293)
142 3as5_A MAMA; tetratricopeptide 50.5 43 0.0015 23.6 6.3 49 151-208 93-141 (186)
143 1hxi_A PEX5, peroxisome target 50.2 27 0.00093 24.5 5.0 48 150-206 67-114 (121)
144 1wqg_A Ribosome recycling fact 49.8 53 0.0018 26.5 7.1 73 40-113 103-175 (185)
145 1wao_1 Serine/threonine protei 49.3 31 0.0011 30.9 6.3 26 179-205 77-102 (477)
146 3gyz_A Chaperone protein IPGC; 48.7 45 0.0015 24.9 6.3 48 150-206 52-99 (151)
147 3qky_A Outer membrane assembly 48.0 96 0.0033 24.1 11.7 63 10-73 152-223 (261)
148 2ho1_A Type 4 fimbrial biogene 47.7 89 0.0031 23.7 16.9 62 6-72 71-132 (252)
149 1eh1_A Ribosome recycling fact 47.3 47 0.0016 26.8 6.4 73 40-113 104-176 (185)
150 1hh8_A P67PHOX, NCF-2, neutrop 46.9 85 0.0029 23.2 13.4 57 150-207 87-151 (213)
151 2kat_A Uncharacterized protein 45.0 67 0.0023 21.5 11.9 60 5-69 18-77 (115)
152 2vgx_A Chaperone SYCD; alterna 44.7 58 0.002 23.6 6.3 47 151-206 38-84 (148)
153 1ge9_A Ribosome recycling fact 44.6 79 0.0027 25.4 7.4 70 40-113 105-174 (184)
154 3bee_A Putative YFRE protein; 44.2 35 0.0012 23.5 4.7 28 7-34 44-71 (93)
155 2yhc_A BAMD, UPF0169 lipoprote 43.5 73 0.0025 24.5 7.1 50 150-205 20-69 (225)
156 1zu2_A Mitochondrial import re 43.3 46 0.0016 25.9 5.7 71 130-205 42-119 (158)
157 4ga2_A E3 SUMO-protein ligase 43.2 31 0.0011 25.1 4.5 48 150-206 13-60 (150)
158 1hxi_A PEX5, peroxisome target 41.7 75 0.0026 22.1 6.3 49 150-207 33-81 (121)
159 3gw4_A Uncharacterized protein 40.4 1E+02 0.0035 22.3 18.4 73 122-208 105-178 (203)
160 2wb7_A PT26-6P; extra chromoso 39.6 1.1E+02 0.0038 28.6 8.4 65 138-203 436-513 (526)
161 4abn_A Tetratricopeptide repea 38.6 2E+02 0.0069 25.2 17.3 47 6-57 137-183 (474)
162 2wh5_A Acyl-COA-binding domain 36.1 66 0.0023 23.5 5.2 50 20-71 10-75 (106)
163 2g0u_A Type III secretion syst 34.9 22 0.00074 25.7 2.3 58 122-186 6-67 (92)
164 1p5q_A FKBP52, FK506-binding p 34.5 80 0.0027 26.4 6.3 49 150-207 212-260 (336)
165 2l6j_A TPR repeat-containing p 34.0 95 0.0032 20.0 5.8 30 5-34 3-32 (111)
166 2if4_A ATFKBP42; FKBP-like, al 33.9 35 0.0012 28.8 3.9 50 151-206 196-259 (338)
167 1wao_1 Serine/threonine protei 32.5 64 0.0022 28.8 5.6 14 20-33 20-33 (477)
168 3sz7_A HSC70 cochaperone (SGT) 32.4 1.4E+02 0.0046 21.3 10.9 26 9-34 14-39 (164)
169 3ma5_A Tetratricopeptide repea 31.2 1.1E+02 0.0039 20.1 9.8 58 6-68 7-64 (100)
170 3caz_A BAR protein; thermo-aci 30.6 2.3E+02 0.0077 23.3 10.8 108 12-166 100-210 (294)
171 1w3b_A UDP-N-acetylglucosamine 28.1 2.5E+02 0.0084 22.9 16.3 26 179-205 206-231 (388)
172 2pzi_A Probable serine/threoni 27.6 3.7E+02 0.013 24.9 13.0 46 6-55 433-478 (681)
173 2w2u_A Hypothetical P60 katani 27.2 79 0.0027 21.8 4.2 27 8-34 21-47 (83)
174 2e2e_A Formate-dependent nitri 26.3 1.2E+02 0.0042 21.8 5.4 50 150-207 60-111 (177)
175 2vsy_A XCC0866; transferase, g 25.0 1.3E+02 0.0045 26.8 6.3 16 19-34 2-17 (568)
176 2kck_A TPR repeat; tetratricop 24.9 1.3E+02 0.0046 18.9 7.7 26 9-34 9-34 (112)
177 2vsy_A XCC0866; transferase, g 24.2 3.7E+02 0.013 23.7 16.9 29 6-34 23-51 (568)
178 2h6f_A Protein farnesyltransfe 24.1 3.4E+02 0.012 23.3 12.3 58 7-69 98-156 (382)
179 2vq2_A PILW, putative fimbrial 23.6 2.1E+02 0.0072 20.6 16.8 166 6-205 42-210 (225)
180 2if4_A ATFKBP42; FKBP-like, al 23.4 1.4E+02 0.0049 24.9 5.9 47 151-206 247-293 (338)
181 2v6y_A AAA family ATPase, P60 23.3 1E+02 0.0035 21.1 4.2 27 8-34 13-39 (83)
182 3mkr_A Coatomer subunit epsilo 23.2 1.7E+02 0.0057 23.8 6.2 47 151-206 183-229 (291)
183 2r5s_A Uncharacterized protein 23.1 2.2E+02 0.0074 20.6 6.4 45 6-54 6-50 (176)
184 1ouv_A Conserved hypothetical 22.8 1.6E+02 0.0055 22.8 5.9 17 190-206 55-71 (273)
185 2h6f_A Protein farnesyltransfe 21.8 3.8E+02 0.013 23.0 13.5 49 7-59 201-249 (382)
186 1ihg_A Cyclophilin 40; ppiase 21.8 1.2E+02 0.0042 25.9 5.3 48 151-207 290-337 (370)
187 2w9y_A CE-FAR-7, fatty acid/re 21.3 1.1E+02 0.0037 23.6 4.2 75 96-173 60-136 (140)
188 2pmr_A Uncharacterized protein 21.2 1.5E+02 0.0052 20.8 4.7 45 86-138 8-60 (87)
189 1na3_A Designed protein CTPR2; 20.8 1.6E+02 0.0053 18.1 7.1 62 7-73 10-71 (91)
190 3iyk_A VP5; icosahedral virus; 20.7 4.5E+02 0.015 24.5 8.8 74 19-95 120-199 (526)
191 2oo2_A Hypothetical protein AF 20.7 65 0.0022 22.8 2.6 46 85-138 9-56 (86)
192 2r17_C Vacuolar protein sortin 20.7 65 0.0022 27.9 3.2 54 150-204 211-272 (298)
193 2r5s_A Uncharacterized protein 20.4 2.5E+02 0.0084 20.2 7.2 29 6-34 108-136 (176)
194 4i17_A Hypothetical protein; T 20.3 2.7E+02 0.0093 20.7 13.8 60 6-70 42-101 (228)
195 2kc7_A BFR218_protein; tetratr 20.3 1.7E+02 0.006 18.5 6.0 26 9-34 3-28 (99)
196 2c2l_A CHIP, carboxy terminus 20.1 1.8E+02 0.0061 23.4 5.7 23 11-33 9-31 (281)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=1.2e-86 Score=572.29 Aligned_cols=207 Identities=54% Similarity=0.813 Sum_probs=202.1
Q ss_pred CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhh
Q 027700 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH 83 (220)
Q Consensus 4 ~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~ 83 (220)
.+|+++||+|||||||||||||+++||++++ . +++||.||||||||||||+||+||+|||+|+++||+++.+|++.+
T Consensus 6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~--~-~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~ 82 (236)
T 3iqu_A 6 MERASLIQKAKLAEQAERYEDMAAFMKGAVE--K-GEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEK 82 (236)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--T-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHH
Confidence 4799999999999999999999999999998 3 599999999999999999999999999999999999988888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 027700 84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI 163 (220)
Q Consensus 84 ~~~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 163 (220)
++.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||.+|++|++++++|+++|++|+++
T Consensus 83 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~i 162 (236)
T 3iqu_A 83 GPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDI 162 (236)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccccchh
Q 027700 164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHGCQRL 213 (220)
Q Consensus 164 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~ 213 (220)
|+++||||||+|||||||||||||||+|+|++||++||+|||+||+++|-
T Consensus 163 A~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~ 212 (236)
T 3iqu_A 163 SKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHT 212 (236)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999984
No 2
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=5.7e-86 Score=571.34 Aligned_cols=208 Identities=51% Similarity=0.805 Sum_probs=198.6
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 027700 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (220)
Q Consensus 3 ~~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~ 82 (220)
|.+|+++||+|||||||||||||+++||++++ . +++||.||||||||||||+||+||+|||+|+++||+++.+|++.
T Consensus 1 m~~re~lv~~AklaeqaeRyddM~~~Mk~v~~-~--~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~ 77 (248)
T 3uzd_A 1 MVDREQLVQKARLAEQAERYDDMAAAMKNVTE-L--NEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEK 77 (248)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT-T--CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-c--CCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHH
Confidence 45899999999999999999999999999998 3 59999999999999999999999999999999999998788888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--chHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHH
Q 027700 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG--ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (220)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (220)
+++.+++||++|++||..+|++|+++||++|||.++++ +++|||+|||||||||+|||..|++|++++++|+++|++|
T Consensus 78 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A 157 (248)
T 3uzd_A 78 KIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEA 157 (248)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccccchh
Q 027700 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHGCQRL 213 (220)
Q Consensus 161 ~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~ 213 (220)
+++|+++||||||+|||||||||||||||+|+|++||++||+|||+||++||-
T Consensus 158 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~ 210 (248)
T 3uzd_A 158 HEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDT 210 (248)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999984
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=9.9e-86 Score=572.26 Aligned_cols=208 Identities=62% Similarity=0.957 Sum_probs=201.9
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 027700 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (220)
Q Consensus 3 ~~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~ 82 (220)
|.+|++++|+|||||||||||||+++||++++ . +++||.||||||||||||+||+||+|||+|+++||+++.+|++.
T Consensus 28 m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~--~-~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 28 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--M-DVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--T-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhHHHHHHHHHHHHHhccHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 45899999999999999999999999999998 3 59999999999999999999999999999999999998889999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 027700 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (220)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (220)
+++.+++||+||++||..+|++|+++||++|||+++++|++|||+|||||||||+|||.+|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccccchh
Q 027700 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHGCQRL 213 (220)
Q Consensus 163 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~ 213 (220)
+|+++||||||+|||||||||||||||+|+|++||++||+|||+||++||-
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~ 235 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDT 235 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhc
Confidence 999899999999999999999999999999999999999999999999984
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=4.8e-84 Score=556.64 Aligned_cols=208 Identities=62% Similarity=0.957 Sum_probs=201.3
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 027700 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (220)
Q Consensus 3 ~~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~ 82 (220)
|++|++++|+|||++||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++++|++.
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~--~-~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--M-DVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--T-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhc--c-cCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 45799999999999999999999999999998 3 58999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 027700 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (220)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (220)
+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccccchh
Q 027700 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHGCQRL 213 (220)
Q Consensus 163 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~ 213 (220)
+|+++||||||+||||+||||||||||+|+|++||++||+|||+||+++|-
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~ 209 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDT 209 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhc
Confidence 999899999999999999999999999999999999999999999999983
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=4.8e-83 Score=557.02 Aligned_cols=207 Identities=71% Similarity=1.046 Sum_probs=201.7
Q ss_pred CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCC--CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccch
Q 027700 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPA--TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE 81 (220)
Q Consensus 4 ~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~--~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~ 81 (220)
++|++++|+|||++||||||||+++||++++ . + ++||.||||||||||||+||++|+|||+|+++||+++.+|++
T Consensus 6 ~~re~~v~~AkLaeqaeRyddm~~~mk~v~~-~--~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~ 82 (260)
T 1o9d_A 6 TAREENVYMAKLAEQAERYEEMVEFMEKVSN-S--LGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 82 (260)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-T--CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHc-c--CCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcH
Confidence 4799999999999999999999999999998 3 5 899999999999999999999999999999999999888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 027700 82 EHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQ 161 (220)
Q Consensus 82 ~~~~~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 161 (220)
.+++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|+
T Consensus 83 ~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 162 (260)
T 1o9d_A 83 EHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQ 162 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccccchh
Q 027700 162 DIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHGCQRL 213 (220)
Q Consensus 162 ~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~ 213 (220)
++|+++||||||+||||+||||||||||+|+|++||++||+|||+||+++|-
T Consensus 163 ~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~ 214 (260)
T 1o9d_A 163 DIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDT 214 (260)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhc
Confidence 9999899999999999999999999999999999999999999999999983
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=7.2e-83 Score=555.56 Aligned_cols=205 Identities=58% Similarity=0.915 Sum_probs=199.3
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCC---CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccch
Q 027700 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPA---TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE 81 (220)
Q Consensus 5 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~---~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~ 81 (220)
+|++++|+|||++||||||||+++||++++ . + ++||.||||||||||||+||++|+|||+|+++||+++.+|++
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~-~--~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~ 103 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVE-A--RQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAE 103 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-S--CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-c--cCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcH
Confidence 599999999999999999999999999998 3 5 899999999999999999999999999999999999888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHH
Q 027700 82 EHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQ 161 (220)
Q Consensus 82 ~~~~~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 161 (220)
.+++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||.+|++|++++++|+++|++|+
T Consensus 104 ~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 183 (260)
T 2npm_A 104 DASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDAT 183 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccccchh
Q 027700 162 DIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHGCQRL 213 (220)
Q Consensus 162 ~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~~~~~ 213 (220)
++| ++||||||+|||||||||||||||+|+|++||++||+|||+||+++|-
T Consensus 184 ~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~ 234 (260)
T 2npm_A 184 VVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDK 234 (260)
T ss_dssp HHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGG
T ss_pred HHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhc
Confidence 999 899999999999999999999999999999999999999999999983
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=7.6e-82 Score=549.21 Aligned_cols=202 Identities=22% Similarity=0.376 Sum_probs=172.9
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhh-hcccc-hh
Q 027700 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EGRKN-EE 82 (220)
Q Consensus 5 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~-~~~~~-~~ 82 (220)
+|++++|+|||||||||||||+++| ++ . +++||.||||||||||||+||+||+|||+|+++||++ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e--~-~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TE--S-SDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---Hh--c-CCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 6999999999999999999999999 65 3 5999999999999999999999999999999999999 67787 88
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 027700 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (220)
Q Consensus 83 ~~~~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (220)
+++.+++||+||++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||.+|++|++++++|+++|++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhcC--CCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc---ccccchh
Q 027700 163 IALTDL--APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI---PHGCQRL 213 (220)
Q Consensus 163 ~a~~~L--~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~---ai~~~~~ 213 (220)
+|+++| |||||||||||||||||||||+|+|++||++||+|||+ ||+++|-
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~ 236 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQ 236 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--C
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhcc
Confidence 999899 99999999999999999999999999999999999999 9999974
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=1.5e-79 Score=524.44 Aligned_cols=191 Identities=22% Similarity=0.278 Sum_probs=183.2
Q ss_pred cHHhHH---HHHHHHHHhCCHHHHHHHHHHHhhc---cCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcc
Q 027700 5 TREQYV---YLAKLAEQAERYEEMVKFMDSLVTS---STPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGR 78 (220)
Q Consensus 5 ~re~li---~~Aklaeq~eRy~Dm~~~mk~~i~~---~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~ 78 (220)
+|++++ |+||||+||||||||+++||++++. . +++||.||||||||||||+||++|+|||+|+++||++ +
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~--~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k 77 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFE--NSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--L 77 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--C
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--c
Confidence 589999 9999999999999999999999972 2 4899999999999999999999999999999999998 6
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHH
Q 027700 79 KNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYK 158 (220)
Q Consensus 79 ~~~~~~~~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 158 (220)
|++.+++++++||++|++||..+|++|+++||++|||++ |++|||+|||||||||+|||.+|+ +++|+++|+
T Consensus 78 ~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~ 149 (227)
T 2o8p_A 78 NNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQ 149 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHH
Confidence 788899999999999999999999999999999999998 999999999999999999999998 899999999
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 159 AAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 159 ~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+|+++|+++||||||+||||+||||||||||+|+|++||.+||+|||.+
T Consensus 150 ~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 150 DAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999964
No 9
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=95.54 E-value=0.84 Score=37.68 Aligned_cols=71 Identities=8% Similarity=-0.008 Sum_probs=55.5
Q ss_pred HhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 127 LKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 127 ~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+...|..|..+-+ -++|...|++|++.+. .++..+|....+..|.+..|++ +|+.++|+...++|.+.
T Consensus 158 ~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 158 ENAIANIYAENGY----------LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 4455666644322 4678999999999886 4666777777789999999998 79999999999999876
Q ss_pred ccc
Q 027700 207 PHG 209 (220)
Q Consensus 207 ai~ 209 (220)
+..
T Consensus 226 ~~~ 228 (293)
T 3u3w_A 226 SCR 228 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 10
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.46 E-value=0.7 Score=36.31 Aligned_cols=56 Identities=25% Similarity=0.271 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.|...|++|+++.+...++.+|.......|.+..++. .|+.++|....++++..
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 467899999999998888888999988888899888888 79999999999998875
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.11 E-value=0.75 Score=34.58 Aligned_cols=164 Identities=13% Similarity=0.123 Sum_probs=87.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHH
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~ 86 (220)
.-...++.+..+-|+|++++++++++++. +|. +.+=...++.+|-. .+....+...+.......... .......
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~---~p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKA---DPN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTS-AEAYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchh-HHHHHHH
Confidence 45567899999999999999999999983 244 45555666666644 344444544444332221111 1111111
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 027700 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (220)
Q Consensus 87 i~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (220)
..-+.. .-.++-...+...+.+ -|.. .. .+...|..|.-+ |+ -++|.+.|++|+++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~-----~~~~----~~--~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIAL-----NTVY----AD--AYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HH--HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----Cccc----hH--HHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 011111 0011122222222221 1221 11 123345544322 11 35688889988864
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.|.+| ....|.+..|+. +|+.++|+..-++|++.
T Consensus 137 ---~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALEK 170 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred ---cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHhC
Confidence 45554 345566666666 89999999999888754
No 12
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.84 E-value=0.22 Score=46.16 Aligned_cols=96 Identities=10% Similarity=0.052 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q 027700 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (220)
Q Consensus 96 ~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 175 (220)
+|-..+|...+.+-.+.|=|...+ ..=-+.--|..|+..-. -+.|...|++|+++-+..|+|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~---~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLY---VLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHH---HHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 456677778888777666444211 11112223333333211 35689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 176 LGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
+....|.++.|+. .|+.++|..+.++|++
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYA 421 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 9999999999888 7999999999998875
No 13
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=94.29 E-value=0.21 Score=45.32 Aligned_cols=55 Identities=9% Similarity=0.001 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
-+.|...|++|+++-+..++|.||.......|.++.|.. .|+.++|..+-++|++
T Consensus 345 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 345 LEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999888 7999999999988875
No 14
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.27 E-value=0.38 Score=43.86 Aligned_cols=96 Identities=14% Similarity=0.070 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q 027700 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (220)
Q Consensus 96 ~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 175 (220)
+|...+|...+.+-.+.|=|...+ ..=-+.--|.-|+.+ |+ -++|...|++|+++-++.++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g~-----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----QD-----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----cC-----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 455667777777777666444321 111122223333222 11 35689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 176 LGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
.....|.++-|+. .|+.++|..+-++|++
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 9999999999888 7999999999998875
No 15
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=93.90 E-value=2.6 Score=35.61 Aligned_cols=189 Identities=16% Similarity=0.102 Sum_probs=99.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~ 82 (220)
..+..++..+.+.|+|++++.++.++++. ++. +.+ =...+..+|-. .+....+...+....+..+..++..
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQA---GTE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHh---ccc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCch
Confidence 45667888889999999999999999973 233 222 23344444432 3444445444432221111111111
Q ss_pred -hh----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhc-------ccchhHHHH
Q 027700 83 -HV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEF-------KVGDERKAA 149 (220)
Q Consensus 83 -~~----~~i~~yk-~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~ 149 (220)
.. .+..-|. ..--++-...+...+++.... .+.......+...|..|...-+. ...++-...
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 00 1111111 111233344445555544332 12223333444456555544330 001122334
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
.+.|...|++|++++... +.+|.......|.+..|+. .|+.++|+...++|++..-
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYL-LGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHH
Confidence 678889999999888643 2345555556666666666 7999999999888876543
No 16
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=93.86 E-value=1.9 Score=34.02 Aligned_cols=54 Identities=11% Similarity=-0.000 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.|...|++|+++....-.+.++.......+.+.+|+. .|+.++|+...++|+..
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~ 250 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTI-NRDKVKADAAWKNILAL 250 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 4788899999988643333223333455556666655 89999999999988753
No 17
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=93.85 E-value=2 Score=34.25 Aligned_cols=186 Identities=16% Similarity=0.155 Sum_probs=100.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccC--C--CCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhh-hc--cc
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSST--P--ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EG--RK 79 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~--~--~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~-~~--~~ 79 (220)
+-+..++......|+|++++.+++++++... . +.+....-...++.+|-. .+....+...+....... .. ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4566788899999999999999999885210 0 011122223334444322 233333433332211110 00 00
Q ss_pred chh----hhHHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHH
Q 027700 80 NEE----HVSLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTM 154 (220)
Q Consensus 80 ~~~----~~~~i~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~ 154 (220)
.+. ...+..-|.. .=-++-...+...+++.....-+. .......+-..|..|... |+ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 000 0111111110 111233334444444433321111 122233333445544332 11 46789
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 155 LSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 155 ~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|++|+++.....++.+|.......+.+..|+. .|+.++|....+++.+.+
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 9999999999888888899888888888888887 799999999999998753
No 18
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.58 E-value=0.59 Score=36.77 Aligned_cols=56 Identities=16% Similarity=0.055 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.|...|++|+++.+...+|.+|.......|.+..++. +|+.++|....++|++.
T Consensus 101 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 101 YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 356899999999999888888899999999999998887 79999999999999876
No 19
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=93.56 E-value=2.6 Score=34.59 Aligned_cols=76 Identities=8% Similarity=0.012 Sum_probs=52.7
Q ss_pred CchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHH
Q 027700 120 GESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTM 199 (220)
Q Consensus 120 ~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~i 199 (220)
....+..+...|..|...-+ -++|...|++|+++++. .+...........|.+..|+. +|+.++|+..
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~ 218 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQ 218 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHH
Confidence 33344455566776655422 35689999999998863 432222333677888888887 8999999999
Q ss_pred HHHhhccc
Q 027700 200 AKQVCFIP 207 (220)
Q Consensus 200 Ak~Afd~a 207 (220)
.++|.+.+
T Consensus 219 ~~kal~~~ 226 (293)
T 2qfc_A 219 VNKAIEIS 226 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 20
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=93.38 E-value=0.8 Score=39.06 Aligned_cols=73 Identities=15% Similarity=0.142 Sum_probs=50.8
Q ss_pred hHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHH
Q 027700 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (220)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk 201 (220)
-..+|+-.+|.++...-. -+.|...|++|++++.. . |.+|..-....+.+..|+. +|+.++|+...+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~ 167 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-KDRIEKAEFFFKMSESYYY-MKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-CCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345666677877654432 45689999999988763 3 3344344455566777776 899999999999
Q ss_pred Hhhccc
Q 027700 202 QVCFIP 207 (220)
Q Consensus 202 ~Afd~a 207 (220)
+|.+..
T Consensus 168 ~al~~~ 173 (383)
T 3ulq_A 168 QAYEIY 173 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988754
No 21
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.77 E-value=0.23 Score=45.31 Aligned_cols=54 Identities=7% Similarity=-0.004 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
+.|...|++|+++.++.|.|.||-.+...-|.+.-|.. +|+.++|..+.++|+.
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~ 368 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIK 368 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHH
Confidence 56788999999999989999999999999999988888 8999999999998864
No 22
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.63 E-value=3.2 Score=33.04 Aligned_cols=188 Identities=13% Similarity=0.038 Sum_probs=98.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~ 82 (220)
..+...+....+.|+|++++.+++++++. ++. +.+ =...++.+|-. .+....+...+....+.....++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQV---GTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhh---Ccc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 56778899999999999999999999973 233 222 12233444332 2333444444332111111011111
Q ss_pred h-h----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcc----------cchhH
Q 027700 83 H-V----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFK----------VGDER 146 (220)
Q Consensus 83 ~-~----~~i~~yk-~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~ 146 (220)
. . .+..-|. ..--++-...+...+++... ..++......+...|..|...-+.. ..++-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 0 0 1111111 11123334444455554433 2233344445556677776655410 01222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
....+.|...|++|++++... +.+|.......+.+..++. .|+.++|....++|++.+
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 213 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIA 213 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 334677888888888877642 2334444455555655555 799999998888887654
No 23
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=92.55 E-value=4 Score=33.92 Aligned_cols=188 Identities=14% Similarity=0.066 Sum_probs=97.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~ 82 (220)
..+..++..+.+.|+|++++.++.++++. ++. +.+ =...++.+|-. .+....+...+.....-....++..
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQV---GTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhc---Ccc-cHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccH
Confidence 45677888999999999999999999973 233 222 23344444432 3334444444332111111111111
Q ss_pred h-h----HHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhh-------ccc---chhH
Q 027700 83 H-V----SLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE-------FKV---GDER 146 (220)
Q Consensus 83 ~-~----~~i~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE-------~~~---~~~~ 146 (220)
. . ....-|.. .=-++-...+...+++.... .++......+-..|..|...-. ... .++-
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 0 0 11111111 11233344445555544332 1222233334444555544433 111 1233
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
....+.|...|++|++++.. . +.+|.......|.+..++. .|+.++|+...++|...+
T Consensus 160 ~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 217 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIA 217 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-HTBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHH
Confidence 44567788889999888864 3 3445555566666666666 799999999888887653
No 24
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=92.51 E-value=0.8 Score=39.13 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=53.5
Q ss_pred chHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHH
Q 027700 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMA 200 (220)
Q Consensus 121 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iA 200 (220)
.-..+|+-.+|.++...-. -+.|...|++|++++.. . +.+|..-....|.+..|+. +|++++|+...
T Consensus 98 ~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~ 164 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-V-SDDIEKAEFHFKVAEAYYH-MKQTHVSMYHI 164 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-C-CChHHHHHHHHHHHHHHHH-cCCcHHHHHHH
Confidence 3455666778887654432 35689999999988763 3 3345555566677777777 89999999999
Q ss_pred HHhhcccc
Q 027700 201 KQVCFIPH 208 (220)
Q Consensus 201 k~Afd~ai 208 (220)
++|.+..-
T Consensus 165 ~~al~~~~ 172 (378)
T 3q15_A 165 LQALDIYQ 172 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887543
No 25
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=92.05 E-value=0.31 Score=45.15 Aligned_cols=54 Identities=17% Similarity=0.038 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
+.|...|++|+++.++-|.|.||-.+...-|.+..|.. .|+.++|..+.++|++
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~ 379 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVD 379 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 45778899999999989999999999999999999888 7999999999998865
No 26
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=91.58 E-value=4.5 Score=32.47 Aligned_cols=174 Identities=7% Similarity=-0.081 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHH
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLV 87 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i 87 (220)
-+..++.+..+.|+|++++..+++++.. .+. +..-...++.+|-. .+..-.+...+....+..... ......+.
T Consensus 127 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~~~~~~-~~~~~~l~ 200 (330)
T 3hym_B 127 AWIAYGHSFAVESEHDQAMAAYFTAAQL---MKG-CHLPMLYIGLEYGL-TNNSKLAERFFSQALSIAPED-PFVMHEVG 200 (330)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH---TTT-CSHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHh---ccc-cHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHhCCCC-hHHHHHHH
Confidence 4556666777777777777777777652 133 22223334444433 333344444443322221110 01111111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 027700 88 KDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (220)
Q Consensus 88 ~~yk-~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (220)
.-|. ..=-++-.......+++....- .........-.+...|..|... |+ .+.|...|++|+++
T Consensus 201 ~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~la~~~~~~-----g~-----~~~A~~~~~~a~~~--- 265 (330)
T 3hym_B 201 VVAFQNGEWKTAEKWFLDALEKIKAIG--NEVTVDKWEPLLNNLGHVCRKL-----KK-----YAEALDYHRQALVL--- 265 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTTS--CSCTTTTCCHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHHcccHHHHHHHHHHHHHHhhhcc--ccccccHHHHHHHHHHHHHHHh-----cC-----HHHHHHHHHHHHhh---
Confidence 1111 1112333444444444433221 1111111111222345544322 11 45688889998865
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 167 DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 167 ~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
.|.+| ....+.+..++. +|+.++|....++++...-
T Consensus 266 --~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~p 301 (330)
T 3hym_B 266 --IPQNA---STYSAIGYIHSL-MGNFENAVDYFHTALGLRR 301 (330)
T ss_dssp --STTCS---HHHHHHHHHHHH-HTCHHHHHHHHHTTTTTCS
T ss_pred --Cccch---HHHHHHHHHHHH-hccHHHHHHHHHHHHccCC
Confidence 23443 334555666666 7999999999999886543
No 27
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=91.27 E-value=6.1 Score=33.40 Aligned_cols=73 Identities=15% Similarity=0.118 Sum_probs=47.1
Q ss_pred HHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHH
Q 027700 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ 202 (220)
Q Consensus 123 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~ 202 (220)
..-.+-..|..|..+-. -+.|...|++|+++... .+..+|-......|.+..|.. +|+.++|+...++
T Consensus 142 ~a~~~~~lg~~~~~~~~----------~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 209 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQ----------TYFSMDYARQAYEIYKE-HEAYNIRLLQCHSLFATNFLD-LKQYEDAISHFQK 209 (383)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHT-CSTTHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-CccchHHHHHHHHHHHHHHHH-hcCHHHHHHHHHH
Confidence 34444556666655432 35689999999999874 333344333344455555555 7999999998888
Q ss_pred hhccc
Q 027700 203 VCFIP 207 (220)
Q Consensus 203 Afd~a 207 (220)
|.+.+
T Consensus 210 al~~~ 214 (383)
T 3ulq_A 210 AYSMA 214 (383)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 28
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=91.08 E-value=6.6 Score=33.80 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
-++|.+.|++|+++ .|.++..-.+.+++..+.+.-.|+.++|+..-++|+.
T Consensus 350 ~~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~ 400 (472)
T 4g1t_A 350 YEEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVK 400 (472)
T ss_dssp HHHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 35689999999853 4455555566778888877678999999988887764
No 29
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=90.32 E-value=6.9 Score=32.40 Aligned_cols=180 Identities=14% Similarity=0.069 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhcc--CCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh---
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSS--TPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE--- 82 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~--~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~--- 82 (220)
-+..++.+....|+|++++.++++.+... .++++....-...++.+|. ..|....+...+..........++..
T Consensus 49 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 127 (406)
T 3sf4_A 49 IYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK-VLGNFDEAIVCCQRHLDISRELNDKVGEA 127 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccccchH
Confidence 35578888889999999999998876421 0001111112223333332 23444445444432211111111111
Q ss_pred --hhHHHHHHHHH-H--------------------HHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhh
Q 027700 83 --HVSLVKDYRSK-V--------------------ESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE 139 (220)
Q Consensus 83 --~~~~i~~yk~k-i--------------------~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE 139 (220)
...+..-|... - -++-...+...+.+.... .+.......+...|..|...-.
T Consensus 128 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~ 202 (406)
T 3sf4_A 128 RALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL-----GDRAAQGRAFGNLGNTHYLLGN 202 (406)
T ss_dssp HHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-----cCcHHHHHHHHHHHHHHHHccC
Confidence 01111111111 1 233444455555554432 1222233333444555444322
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 140 FKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 140 ~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.|...|++|++++.. . +.++.......|.+..|+. .|+.++|....++|++.
T Consensus 203 ----------~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 256 (406)
T 3sf4_A 203 ----------FRDAVIAHEQRLLIAKE-F-GDKAAERRAYSNLGNAYIF-LGEFETASEYYKKTLLL 256 (406)
T ss_dssp ----------HHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHHHh-c-CCcHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHH
Confidence 34577788888887764 2 2233333344455555555 78888888887777654
No 30
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=90.07 E-value=0.33 Score=43.99 Aligned_cols=54 Identities=13% Similarity=-0.042 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
+.|...|++++++.++-|+|.||-.+...-|.+.-|.. .|+.++|..+.++++.
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTME 357 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Confidence 45677788888777778999999999999999888877 7999999999998764
No 31
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=89.80 E-value=6.4 Score=31.23 Aligned_cols=54 Identities=15% Similarity=0.066 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|++++... .+|...+ ...+.+..+. -.|+.++|....+++++.+
T Consensus 199 ~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~ 253 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLA 253 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHH
Confidence 356788888888887642 2333334 4444444444 4799999998888887653
No 32
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=89.74 E-value=3.6 Score=28.85 Aligned_cols=54 Identities=19% Similarity=0.086 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|...|++|++++... +.+|.......|.+..++. .|+.++|....++|++.+
T Consensus 66 ~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 45677777777776532 1223333444555555555 677777777777766543
No 33
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=89.66 E-value=7 Score=31.54 Aligned_cols=51 Identities=6% Similarity=-0.055 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHG 209 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (220)
.+.|...|++|++. .|.+| ....+.+..++. .|+.++|...-++|.+..-.
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~-~g~~~~A~~~~~~a~~~~p~ 338 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYLI-EEMYDEAIQDYEAAQEHNEN 338 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCC
Confidence 45678888888764 44554 355666666665 89999999999998876433
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=89.41 E-value=9.1 Score=32.48 Aligned_cols=48 Identities=6% Similarity=-0.051 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.|...|++|+++ .|.+| ....+.+..+.. .|+.++|+...++++..
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~al~~ 358 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYLI-EEMYDEAIQDYETAQEH 358 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 45677888888754 44554 344555555555 89999999999998764
No 35
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=89.05 E-value=4.5 Score=31.80 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=25.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+.++.+|...-+.|+|++++..++++++
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 31 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEA 31 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 5788999999999999999999999997
No 36
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=88.88 E-value=9.5 Score=31.99 Aligned_cols=27 Identities=15% Similarity=0.173 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
-+..++.+....|+|++++.++++.++
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLT 114 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 355788888889999999999988875
No 37
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=88.67 E-value=13 Score=33.20 Aligned_cols=174 Identities=16% Similarity=0.139 Sum_probs=93.7
Q ss_pred HhHHHHHHHHHHhCCH-HHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhH
Q 027700 7 EQYVYLAKLAEQAERY-EEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (220)
Q Consensus 7 e~li~~Aklaeq~eRy-~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~ 85 (220)
+-+..++++....|+| ++++.++++.++. +|. +.+=...+..+|-. .+....|...+....+.... ......
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~---~p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~--~~~~~~ 175 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKL---EPE-LVEAWNQLGEVYWK-KGDVTSAHTCFSGALTHCKN--KVSLQN 175 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTCCC--HHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhh---CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCC--HHHHHH
Confidence 4456677777778888 8888888888872 233 45556666666644 24444554444322211110 111111
Q ss_pred HHHHHHH----------HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHH
Q 027700 86 LVKDYRS----------KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (220)
Q Consensus 86 ~i~~yk~----------ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (220)
+..-|.. .=-++-...++..+++ -|.. .. .+-..|..|..+. +..+. ...-.+.|..
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~~--~~~~lg~~~~~~~-~~~~~-~~g~~~~A~~ 242 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----GR--SWYILGNAYLSLY-FNTGQ-NPKISQQALS 242 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----HH--HHHHHHHHHHHHH-HHTTC-CHHHHHHHHH
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----HH--HHHHHHHHHHHHH-Hhhcc-ccchHHHHHH
Confidence 1111111 1112333344444432 1221 12 2334555554431 11122 1123677899
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 156 SYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 156 aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+|++|+++ .|.+|-......|.+..|+. +|+.++|....++|...
T Consensus 243 ~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l 287 (474)
T 4abn_A 243 AYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAAL 287 (474)
T ss_dssp HHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 99999875 34233556677888888887 79999999999988764
No 38
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=88.63 E-value=13 Score=33.05 Aligned_cols=49 Identities=8% Similarity=0.075 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|.+.|++++++ .|.+| ....+.+..|.. .|+.++|.+..+++++..
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~~l~~~ 580 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALVYLH-KKIPGLAITHLHESLAIS 580 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hCCHHHHHHHHHHHHhcC
Confidence 45688888888764 35555 334444444444 899999999999988653
No 39
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=88.56 E-value=1.1 Score=32.41 Aligned_cols=48 Identities=15% Similarity=0.279 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
-+.|.+.|++|+++ .|.+|. ...|.+..|+. +|+.++|+...++|+..
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~~---~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNIT---FYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 46789999999864 456653 55678888888 89999999999888753
No 40
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=87.83 E-value=13 Score=32.29 Aligned_cols=51 Identities=6% Similarity=0.168 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHG 209 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (220)
.+.|...|++|++. .|.+| ....+.+..|+. .|+.++|...-++|.+..-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~ 494 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKLQ-MEKIDEAIELFEDSAILART 494 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCC
Confidence 46678888888764 45555 445666666666 89999999999988875443
No 41
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=87.76 E-value=13 Score=32.26 Aligned_cols=55 Identities=9% Similarity=0.184 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHh----------CChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEIL----------NSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~----------~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|+++.... +.-...+|..++.+..++. . |+.++|+...+++....
T Consensus 394 ~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 458 (537)
T 3fp2_A 394 FDTAIKQYDIAKRLEEVQ--EKIHVGIGPLIGKATILAR-QSSQDPTQLDEEKFNAAIKLLTKACELD 458 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--SSCSSTTHHHHHHHHHHHH-HHTC----CCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCcc--hhhHHHHHHHHHHHHHHHH-HhhccchhhhHhHHHHHHHHHHHHHHhC
Confidence 457899999999887532 2233566767777777666 5 99999999999887654
No 42
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=87.73 E-value=12 Score=31.66 Aligned_cols=55 Identities=7% Similarity=0.043 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
-++|...|++|++++...- +|.......|.+..|+. +|+.++|....++|+..+-
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 4678999999999987543 44444556667777776 8999999999999987643
No 43
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=87.09 E-value=8.8 Score=29.58 Aligned_cols=60 Identities=13% Similarity=0.025 Sum_probs=41.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (220)
-+.+..++....+.|+|++++.++.++++. ++.-+..-...+..+|-. .+....|...+.
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 66 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKL---TNNQDSVTAYNCGVCADN-IKKYKEAADYFD 66 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---TTTCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhc---cCCCCcHHHHHHHHHHHH-hhcHHHHHHHHH
Confidence 367888999999999999999999999973 242344444445555543 455555655554
No 44
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=86.66 E-value=9.5 Score=29.51 Aligned_cols=57 Identities=12% Similarity=0.042 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (220)
-+..+|.+..+.|+|++++.+++++++. ++. +.+-...+..+|-. .+..-.+...+.
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~---~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~ 95 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEI---DPS-SADAHAALAVVFQT-EMEPKLADEEYR 95 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhc---CCC-hHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3567777788888888888888888862 133 34444555555533 344445555554
No 45
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=86.61 E-value=12 Score=30.64 Aligned_cols=59 Identities=17% Similarity=0.201 Sum_probs=36.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (220)
-+-+..++.+....|+|++++.+++++++. +|. +.+-...+..+|-. .+....+...+.
T Consensus 98 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 156 (368)
T 1fch_A 98 MEAWQYLGTTQAENEQELLAISALRRCLEL---KPD-NQTALMALAVSFTN-ESLQRQACEILR 156 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHhc---CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 345567777888888888888888888762 233 44455555555543 344444555544
No 46
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=85.79 E-value=10 Score=28.95 Aligned_cols=166 Identities=14% Similarity=0.084 Sum_probs=83.8
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhH
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~ 85 (220)
-+-+..+|.+..+.|+|++++..+++++.. ++. +.+-...++.+|-. .+....+...+....+..... ......
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~---~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~ 130 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALEL---DSS-AATAYYGAGNVYVV-KEMYKEAKDMFEKALRAGMEN-GDLFYM 130 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTCCS-HHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---CCc-chHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCC-HHHHHH
Confidence 345667788888889999999999888872 233 34444455555543 344455555554333222111 111111
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 027700 86 LVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (220)
Q Consensus 86 ~i~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (220)
...-|.. .--++-...++.++.+ -|. ... .+...|..|.-. |+ .+.|...|++++..
T Consensus 131 ~a~~~~~~~~~~~A~~~~~~~~~~-----~~~----~~~--~~~~l~~~~~~~-----~~-----~~~A~~~~~~~~~~- 188 (243)
T 2q7f_A 131 LGTVLVKLEQPKLALPYLQRAVEL-----NEN----DTE--ARFQFGMCLANE-----GM-----LDEALSQFAAVTEQ- 188 (243)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHH-----CTT----CHH--HHHHHHHHHHHH-----TC-----CHHHHHHHHHHHHH-
T ss_pred HHHHHHHhccHHHHHHHHHHHHHh-----CCc----cHH--HHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh-
Confidence 1111111 1112223333333332 121 111 122334433221 11 24577778877654
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 165 LTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 165 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.|.+| ....+.+..++. .|+.++|....+++.+..
T Consensus 189 ----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~ 223 (243)
T 2q7f_A 189 ----DPGHA---DAFYNAGVTYAY-KENREKALEMLDKAIDIQ 223 (243)
T ss_dssp ----CTTCH---HHHHHHHHHHHH-TTCTTHHHHHHHHHHHHC
T ss_pred ----CcccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHccC
Confidence 33443 345566666655 799999999999887654
No 47
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.15 E-value=16 Score=30.83 Aligned_cols=55 Identities=11% Similarity=-0.135 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
-++|...|++|..++.. .+ ..|.-.|...+.+--+|...++.++|+..-.+||+.
T Consensus 191 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 191 LAKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 35689999999998863 43 233444666666666667789999999998888864
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=85.02 E-value=28 Score=33.50 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=38.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHH
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l 68 (220)
+-+..++.+..+.|+|++++.+.++.++. +|+. .+=.+-|..+|.. .+..-.|...+
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l---~P~~-~~a~~nLg~~l~~-~g~~~eA~~~~ 66 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEV---FPEF-AAAHSNLASVLQQ-QGKLQEALMHY 66 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CSCC-HHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC-HHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 55778999999999999999999999983 3553 4445556666554 23333443333
No 49
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=84.67 E-value=1.4 Score=32.64 Aligned_cols=56 Identities=18% Similarity=0.120 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHhhc---CCCC-------CchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTD---LAPT-------HPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~---L~pt-------~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
-+.|...|++|+++.... -.|+ +|....+..|.+..|+. +|+.++|+..+.+|+..
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHhc
Confidence 356899999999886532 1233 67788889999998888 79999999999988764
No 50
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=84.67 E-value=18 Score=30.96 Aligned_cols=57 Identities=12% Similarity=-0.030 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----chhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDL--APTH----PIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--~pt~----pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|+++++.-...+ .|.+ |-......+.+..++. .|+.++|+...+++....
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~~ 267 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIELF 267 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhhC
Confidence 5667888888887443333 4454 6666667777777776 799999999999887654
No 51
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=83.90 E-value=17 Score=29.98 Aligned_cols=59 Identities=10% Similarity=0.046 Sum_probs=41.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~s 70 (220)
+.+..++....+.|+|++++.++++++.. +|. +.+-...+..+|-. .+....+...+..
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~---~p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQ---DPG-DAEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHh---CcC-CHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 45788999999999999999999999972 243 45556666666653 3555556555543
No 52
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=83.47 E-value=12 Score=27.80 Aligned_cols=73 Identities=10% Similarity=0.046 Sum_probs=48.0
Q ss_pred hHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc-hhHHHHHHHHHHHHHHhCChHHHHHHH
Q 027700 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP-IRLGLALNFSVFYYEILNSSEKACTMA 200 (220)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p-irLgL~LN~SVF~yEi~~~~~~A~~iA 200 (220)
..+..+-..|..|...-+ .+.|...|++|+++++ ..+ .+| .......|.+..++. .|++++|....
T Consensus 64 ~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~ 130 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALH-FGDLAGARQEY 130 (203)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHH-hCCHHHHHHHH
Confidence 344445556666654432 3568999999999987 343 345 334445555666665 89999999999
Q ss_pred HHhhccc
Q 027700 201 KQVCFIP 207 (220)
Q Consensus 201 k~Afd~a 207 (220)
++|++.+
T Consensus 131 ~~al~~~ 137 (203)
T 3gw4_A 131 EKSLVYA 137 (203)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888653
No 53
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=83.36 E-value=14 Score=28.72 Aligned_cols=58 Identities=12% Similarity=0.127 Sum_probs=31.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (220)
+-+..++.+..+.|+|++++..+.+++. . +|. +.+=...+..++-. .+....+...+.
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~--~-~p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALK--E-NPQ-DPEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--T-SSS-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--h-CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4556667777777777777777777765 1 133 34444455554432 333444444443
No 54
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=82.96 E-value=15 Score=28.58 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 176 LGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
....++.+..|+. .|+.++|....++|....
T Consensus 215 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 245 (275)
T 1xnf_A 215 SETNFYLGKYYLS-LGDLDSATALFKLAVANN 245 (275)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHH-cCCHHHHHHHHHHHHhCC
Confidence 4556666777666 799999999999887654
No 55
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=82.53 E-value=19 Score=29.62 Aligned_cols=59 Identities=14% Similarity=0.221 Sum_probs=40.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (220)
-+-+..++.+..+.|+|++++.+++++++. +|. +.+-...+..+|.. .+....+...+.
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 157 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLEL---QPN-NLKALMALAVSYTN-TSHQQDACEALK 157 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc---CCC-CHHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 345678899999999999999999999972 243 34555566666543 344455555554
No 56
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=82.08 E-value=3.6 Score=29.69 Aligned_cols=46 Identities=17% Similarity=0.093 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5677888888753 34444 345666666666 6888888887777765
No 57
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=81.86 E-value=4 Score=29.35 Aligned_cols=54 Identities=6% Similarity=-0.083 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
-+.|.+.|++|+++.. +.++.++.+-....|.+..+.. +|+.++|++.-++|+.
T Consensus 58 ~~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 58 FAECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAFQK-QNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 3568999999999876 3555555544455666776665 8999999998887765
No 58
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=81.76 E-value=4.4 Score=27.49 Aligned_cols=56 Identities=5% Similarity=-0.089 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|++... ..++.+|.......+.+..++. .|+.++|....+++++..
T Consensus 54 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~ 109 (131)
T 1elr_A 54 YNKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLAEH 109 (131)
T ss_dssp HHHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHhC
Confidence 3568889999998775 3455555556677778877776 799999999999888754
No 59
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=81.67 E-value=15 Score=27.87 Aligned_cols=165 Identities=9% Similarity=0.020 Sum_probs=73.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHH
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~ 86 (220)
..+..+|...-+.|+|++++.+++++++ . .+-+.+-...+..+|- ..+....+...+....+..... .......
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~-~---~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l 97 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIE-E---NKEDAIPYINFANLLS-SVNELERALAFYDKALELDSSA-ATAYYGA 97 (243)
T ss_dssp ------------------CCTTHHHHHT-T---CTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTC-HHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHH-h---CcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCcc-hHHHHHH
Confidence 3456778888899999999999999987 2 2334555555555553 3455556666655433322111 1111111
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 027700 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (220)
Q Consensus 87 i~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (220)
..-|.. .--++-...+..++++ -|. + ..+ +...|..|... |+ .+.|...|++|++.
T Consensus 98 a~~~~~~~~~~~A~~~~~~~~~~-----~~~--~--~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~-- 154 (243)
T 2q7f_A 98 GNVYVVKEMYKEAKDMFEKALRA-----GME--N--GDL--FYMLGTVLVKL-----EQ-----PKLALPYLQRAVEL-- 154 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----TCC--S--HHH--HHHHHHHHHHT-----SC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHhccHHHHHHHHHHHHHh-----CCC--C--HHH--HHHHHHHHHHh-----cc-----HHHHHHHHHHHHHh--
Confidence 111211 1112223333333332 122 1 122 23344444322 11 35678888888764
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.|.+| ....+.+..++. .|+.++|+...+++....
T Consensus 155 ---~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~ 189 (243)
T 2q7f_A 155 ---NENDT---EARFQFGMCLAN-EGMLDEALSQFAAVTEQD 189 (243)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-HTCCHHHHHHHHHHHHHC
T ss_pred ---CCccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 33443 244556666666 799999999999887654
No 60
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=81.53 E-value=18 Score=28.56 Aligned_cols=68 Identities=13% Similarity=0.112 Sum_probs=46.8
Q ss_pred CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhh
Q 027700 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (220)
Q Consensus 4 ~~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieq 73 (220)
.+-+.+..+|..+-+.|+|++++..+.+++.. .++.+...+=...+..+|-. .+....|...+....+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~-~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 80 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTY-GRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQ 80 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGG-CSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-CCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 34577889999999999999999999999973 12122335556666666643 4566667666654443
No 61
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=80.82 E-value=25 Score=29.72 Aligned_cols=174 Identities=14% Similarity=0.085 Sum_probs=86.2
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHH
Q 027700 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (220)
Q Consensus 10 i~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~ 89 (220)
..+|....+.|+|++++..+.++++. .+-+..-...+..+|-. .+....+...+....+..... ......+..-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILEV----CVWDAELRELRAECFIK-EGEPRKAISDLKAASKLKNDN-TEAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH----CTTCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh----CCCChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 44577788899999999999999872 23355556666666643 355556666665433322111 1111112122
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhh--hhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 027700 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYL--AEFKVGDERKAAAENTMLSYKAAQDIALT 166 (220)
Q Consensus 90 yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYl--aE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (220)
|.. .=-++-......++.+ -|.. ...... +...+..-.++ +... .+..-.+.|...|++|++
T Consensus 221 ~~~~g~~~~A~~~~~~~~~~-----~p~~--~~~~~~-~~~~~~~~~~~~~~~~~---~~~g~~~~A~~~~~~~l~---- 285 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAH-YKQVKKLNKLIESAEEL---IRDGRYTDATSKYESVMK---- 285 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTC--HHHHHH-HHHHHHHHHHHHHHHHH---HHHTCHHHHHHHHHHHHH----
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCh--HHHHHH-HHHHHHHHHHHHHHHHH---HHcCCHHHHHHHHHHHHh----
Confidence 211 1112222223333221 1221 111111 11111100000 0000 011124567888888875
Q ss_pred cCCCCCchhHH-HHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 167 DLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 167 ~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|.+|.... +..+.+..+.. .|+.++|+...+++...
T Consensus 286 -~~p~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 286 -TEPSIAEYTVRSKERICHCFSK-DEKPVEAIRVCSEVLQM 324 (450)
T ss_dssp -HCCSSHHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred -cCCcchHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 3466775544 44555555555 89999999999998753
No 62
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=80.47 E-value=16 Score=27.25 Aligned_cols=59 Identities=10% Similarity=0.034 Sum_probs=38.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~s 70 (220)
+-+..++....+.|+|++++..++++++. .+. +.+-...++.+|-. .+....+...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~---~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 67 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKS---DPK-NELAWLVRAEIYQY-LKVNDKAQESFRQ 67 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHh---Ccc-chHHHHHHHHHHHH-cCChHHHHHHHHH
Confidence 44567788888999999999999998872 233 34455555555543 3445555555543
No 63
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=80.29 E-value=21 Score=28.61 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=42.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~si 71 (220)
-+.++.++....+.|+|++++.++++++.. +|. +.+-...++.+|-. .+....+...+...
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~---~p~-~~~~~~~~a~~~~~-~~~~~~A~~~~~~~ 63 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDG---DPD-NYIAYYRRATVFLA-MGKSKAALPDLTKV 63 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---Ccc-cHHHHHHHHHHHHH-ccCHHHHHHHHHHH
Confidence 356788899999999999999999999872 233 45555566666543 45556666666543
No 64
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=80.00 E-value=3.5 Score=35.56 Aligned_cols=54 Identities=13% Similarity=0.149 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhh
Q 027700 150 AENTMLSYKAAQDIALT-DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVC 204 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~-~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Af 204 (220)
-+.|.+.|++|+++... .....||-.+...-|.+.-|+. +|+.++|...-++|.
T Consensus 67 ~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 67 NEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence 36689999999999865 3445678777777888888888 899999987766654
No 65
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=79.80 E-value=19 Score=27.91 Aligned_cols=47 Identities=19% Similarity=0.159 Sum_probs=34.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKN 56 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn 56 (220)
-+-+..++.+..+.|++++++..++++++. +|. +.+=...++.+|..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~---~P~-~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVAR---TPR-YLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCC-cHHHHHHHHHHHHH
Confidence 455678899999999999999999999982 244 44555556655544
No 66
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=79.77 E-value=5.9 Score=26.40 Aligned_cols=50 Identities=16% Similarity=0.109 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHG 209 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (220)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+...++|....-.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~ 70 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGLRYTST 70 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSS
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCC
Confidence 5688899999864 45554 345677777777 89999999999998865433
No 67
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=79.29 E-value=14 Score=28.06 Aligned_cols=89 Identities=19% Similarity=0.082 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhh--h--hhhhcccchhhhHHHHHHHHHHH
Q 027700 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI--E--QKEEGRKNEEHVSLVKDYRSKVE 95 (220)
Q Consensus 20 eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~si--e--qk~~~~~~~~~~~~i~~yk~ki~ 95 (220)
+|.|..++.+|.-+..-..|++||.|-|.=|.--.|...-.-|-|.|-+..- . .+.+..+ .+-++-..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 5788888888765521113699999999999888888777777777777421 0 0111111 11234445555
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 027700 96 SELSDVCGSILKLLDSHL 113 (220)
Q Consensus 96 ~EL~~~C~eil~lId~~L 113 (220)
+++..+.+..+.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666665544
No 68
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=79.12 E-value=11 Score=27.59 Aligned_cols=46 Identities=7% Similarity=-0.026 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++++..
T Consensus 63 ~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 63 KAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 455555555443 23332 333444555444 56666666666665543
No 69
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=79.04 E-value=22 Score=28.19 Aligned_cols=57 Identities=11% Similarity=-0.077 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-chhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTH-PIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~-pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|+++....-.+.+ |-......+.+..++. .|+.++|+...+++....
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LKKYAEALDYHRQALVLI 266 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhhC
Confidence 35688999999998754333222 3333455566676666 899999999999987654
No 70
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=78.81 E-value=22 Score=27.96 Aligned_cols=184 Identities=13% Similarity=0.099 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccC----CCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhh-hc--ccc
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSST----PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EG--RKN 80 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~----~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~-~~--~~~ 80 (220)
-+..++.+....|+|++++.++++.+.... ++.+....-...++.+|-. .+....+...+....+.. .. ...
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 355788888899999999999999886210 0112222233334444322 344444544443222211 00 000
Q ss_pred hhhh----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHH
Q 027700 81 EEHV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (220)
Q Consensus 81 ~~~~----~~i~~yk-~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (220)
.... .+..-|. ..=-++-.......+++.....-+. ....+..+...|..|...-. .+.|..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~----------~~~A~~ 216 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---DPNVAKTKNNLASCYLKQGK----------FKQAET 216 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---CHHHHHHHHHHHHHHHHHTC----------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHcCC----------HHHHHH
Confidence 1100 1111111 0112333444445555544332111 12223333344554433211 356788
Q ss_pred HHHHHHHHHhh-----------------------------------------cCCCCCchhHHHHHHHHHHHHHHhCChH
Q 027700 156 SYKAAQDIALT-----------------------------------------DLAPTHPIRLGLALNFSVFYYEILNSSE 194 (220)
Q Consensus 156 aY~~A~~~a~~-----------------------------------------~L~pt~pirLgL~LN~SVF~yEi~~~~~ 194 (220)
.|++|++++.. .....+|-......+.+..|.. .|+.+
T Consensus 217 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 295 (311)
T 3nf1_A 217 LYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFE 295 (311)
T ss_dssp HHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHH
Confidence 88888876532 1122567767777777777777 79999
Q ss_pred HHHHHHHHhhcc
Q 027700 195 KACTMAKQVCFI 206 (220)
Q Consensus 195 ~A~~iAk~Afd~ 206 (220)
+|....++|++.
T Consensus 296 ~A~~~~~~al~l 307 (311)
T 3nf1_A 296 AAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 71
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=78.45 E-value=27 Score=28.72 Aligned_cols=22 Identities=14% Similarity=-0.020 Sum_probs=15.5
Q ss_pred HHHHHHhCCHHHHHHHHHHHhh
Q 027700 13 AKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 13 Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+.+....|+|++++++..+.++
T Consensus 43 ~~~~~~~g~~~~A~~~~~~al~ 64 (307)
T 2ifu_A 43 AVAFKNAKQLEQAKDAYLQEAE 64 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 4556667777777777777765
No 72
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=78.27 E-value=14 Score=25.54 Aligned_cols=55 Identities=15% Similarity=-0.008 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
-+.|...|++|++++... + .+|.......+.+..++. .|+.++|+...++|.+.+
T Consensus 105 ~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQEL-K-DRIGEGRACWSLGNAYTA-LGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-c-chHhHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHH
Confidence 456888999999988642 2 234444455666766666 799999999999887654
No 73
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=77.64 E-value=33 Score=29.31 Aligned_cols=175 Identities=10% Similarity=-0.006 Sum_probs=83.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHH
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~ 86 (220)
+-+..++.+..+.|+|++++..++++++. ++. +.+-...++.+|-. .+....+...+....+..... .......
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~---~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~l 378 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKEL---DPE-NIFPYIQLACLAYR-ENKFDDCETLFSEAKRKFPEA-PEVPNFF 378 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHT---CSS-CSHHHHHHHHHTTT-TTCHHHHHHHHHHHHHHSTTC-SHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHh---Chh-hHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHcccC-HHHHHHH
Confidence 34556777788888888888888888762 233 23333334444322 344445555554332221111 1111111
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 027700 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (220)
Q Consensus 87 i~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (220)
..-|.. .--++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|++.
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-- 444 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-- 444 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH--
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh--
Confidence 111111 11122233333333322 221111111112222333332200 012 145688888888764
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
.|.+| ....+.+..+.. .|+.++|....+++.+..-
T Consensus 445 ---~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~ 480 (514)
T 2gw1_A 445 ---DPRSE---QAKIGLAQMKLQ-QEDIDEAITLFEESADLAR 480 (514)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCS
T ss_pred ---CcccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHhcc
Confidence 34554 334555555555 7999999999998877543
No 74
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=77.53 E-value=7 Score=32.66 Aligned_cols=56 Identities=9% Similarity=-0.022 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|...|++|++++...-.+.+|.......|.+..+++ .|+.++|.....+|.+.+
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHh
Confidence 56889999999998765555567666666778888877 699999999999887654
No 75
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=77.18 E-value=28 Score=28.33 Aligned_cols=58 Identities=12% Similarity=0.004 Sum_probs=39.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (220)
+.+..++....+.|+|++++.++.++++. +|. +.+-...+..+|-. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~---~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQ---DPK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHS---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHh---CCC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 45788999999999999999999999972 233 45555566666543 244444444443
No 76
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.09 E-value=6.5 Score=27.52 Aligned_cols=34 Identities=24% Similarity=0.081 Sum_probs=14.6
Q ss_pred CCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhh
Q 027700 170 PTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVC 204 (220)
Q Consensus 170 pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Af 204 (220)
|.+|.......|.+..++. .|+.++|+...+++.
T Consensus 59 ~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~ 92 (148)
T 2dba_A 59 ATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAI 92 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHH
Confidence 3333333344444444333 344555444444443
No 77
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=75.98 E-value=31 Score=28.27 Aligned_cols=51 Identities=6% Similarity=-0.059 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCChHHHHHHHHHhh
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQVC 204 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Af 204 (220)
-+.|...|++|+++.... +. +| ..+ ..+|....++ -+|+.++|...-+++.
T Consensus 171 ~~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~~~~-~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVLVQL-HRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHHHHH-HcCCHHHHHHHHHHHh
Confidence 456889999999887642 21 22 233 3444444444 4799999998888876
No 78
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=75.97 E-value=9.1 Score=24.43 Aligned_cols=49 Identities=14% Similarity=0.254 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|++. .|.+| ....|.+..++. .|+.++|+...+++....
T Consensus 25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 73 (91)
T 1na3_A 25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALELD 73 (91)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHhcC
Confidence 35688889988864 34444 345566777666 899999999998887643
No 79
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=75.59 E-value=31 Score=28.05 Aligned_cols=50 Identities=6% Similarity=-0.081 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCch-hHH---HHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPI-RLG---LALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pi-rLg---L~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
-+.|...|++|+++ .|.+|. +.+ ..+|.++.+.. +|+.++|+..-++|..
T Consensus 174 ~~~A~~~~~~al~~-----~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 227 (292)
T 1qqe_A 174 YIEASDIYSKLIKS-----SMGNRLSQWSLKDYFLKKGLCQLA-ATDAVAAARTLQEGQS 227 (292)
T ss_dssp HHHHHHHHHHHHHT-----TSSCTTTGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHH-----HhcCCcccHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 35678888888764 334432 222 34555555555 8999999988777754
No 80
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=75.52 E-value=11 Score=25.79 Aligned_cols=50 Identities=18% Similarity=0.156 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|+++++ +.|.+|......++.+..++. +|+.++|+..-+++...
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 567888888875 357777666667777777776 89999999998887653
No 81
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=75.20 E-value=29 Score=27.47 Aligned_cols=27 Identities=4% Similarity=-0.085 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
.++.+|....+.|+|++++..+++++.
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~ 49 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQ 49 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344555555555555555555555554
No 82
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=75.14 E-value=22 Score=28.78 Aligned_cols=52 Identities=17% Similarity=0.115 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
.+.|...|++|+++.. +..++.. +....|.+++|++ +|+.++|+..-++|.+
T Consensus 131 ~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 131 YEYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3568899999988542 2233333 3345666777777 8999999999999985
No 83
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=74.30 E-value=34 Score=27.84 Aligned_cols=55 Identities=7% Similarity=-0.086 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhH-HHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
.+.|...|++|+++.... .+|... ....|.+.++.. +|+.++|+..-+++.+..-
T Consensus 134 ~~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~ 189 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD---QSVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIKSSM 189 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHh
Confidence 467899999999987532 123232 345677888777 7999999999999887553
No 84
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=74.05 E-value=9.3 Score=26.47 Aligned_cols=49 Identities=12% Similarity=0.190 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
-+.|...|++|+++ .|.+ .....|.+..++. +|+.++|+...++++...
T Consensus 43 ~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 43 YRKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 35688888888764 4555 3556777877777 799999999999887653
No 85
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=73.71 E-value=7.7 Score=26.42 Aligned_cols=49 Identities=12% Similarity=0.138 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
-+.|...|++|+++ .|.+|. ...+.+..|+. +|+.++|+...++|...+
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYER-LDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHhhh
Confidence 35688888888864 345543 45666776666 899999999999887643
No 86
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=72.88 E-value=49 Score=29.09 Aligned_cols=55 Identities=11% Similarity=0.078 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|.+.|++++++... . +.+|-. .....+.+..|.. .|+.++|....+++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~ 546 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRK-LKMYDAAIDALNQGLLLS 546 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhC
Confidence 46789999999887653 2 345554 3344445555554 899999999999988643
No 87
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=72.83 E-value=11 Score=24.64 Aligned_cols=50 Identities=16% Similarity=0.148 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHG 209 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (220)
+.|...|++|+++ .|.++ ....|.+..++. .|+.++|+...+++....-.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEES---KYWLMKGKALYN-LERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcc
Confidence 4577788888754 23333 345666777766 78899999888888765433
No 88
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=72.15 E-value=7.6 Score=29.38 Aligned_cols=48 Identities=15% Similarity=-0.013 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
-+.|..+|++|+. +.|.||- ...|.++.|.. +|++++|+..-++|...
T Consensus 86 ~~~Ai~~~~~al~-----l~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 86 FQQAADLYAVAFA-----LGKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHHHHHHHH-----HSSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hCCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 4568999999986 4566763 45677777776 89999999988887654
No 89
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=71.52 E-value=13 Score=24.42 Aligned_cols=49 Identities=14% Similarity=0.074 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|...|++|++. .|.+|.. ...|.+..|+. +|+.++|+...++|....
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHhcC
Confidence 5678888888753 4555431 45667777776 799999999998887654
No 90
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=70.94 E-value=37 Score=26.83 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=25.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
-.-+..++.+..+.|+|++++.+++++++
T Consensus 55 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 83 (327)
T 3cv0_A 55 EEAWRSLGLTQAENEKDGLAIIALNHARM 83 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 34566788899999999999999999997
No 91
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=70.91 E-value=8.7 Score=26.40 Aligned_cols=50 Identities=10% Similarity=0.056 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|+++++ ..|.+|..-...++.+..++. .|+.++|+...+++.+.
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Confidence 456777777764 357888666666777777777 79999999999888764
No 92
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=69.83 E-value=14 Score=29.00 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchh-----HHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIR-----LGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pir-----LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
-+.|..+|++|+++.-. .|+..++. -....|-+.-+.. +|+.++|+.-+.+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 46799999999998753 33222333 3377888887777 8999999998888875
No 93
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=69.58 E-value=22 Score=24.56 Aligned_cols=54 Identities=15% Similarity=0.018 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
..|..-|++|++.....- ...+.+-.+..++++-+|. +|+.++|+...++|...
T Consensus 22 ~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhc
Confidence 457778888887664321 1123445566777777777 89999999999998754
No 94
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=68.28 E-value=9 Score=26.55 Aligned_cols=51 Identities=12% Similarity=-0.054 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|....
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 57 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQF 57 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 346778888875 334577777888888888887 799999999999987653
No 95
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=67.90 E-value=37 Score=25.69 Aligned_cols=56 Identities=11% Similarity=0.048 Sum_probs=35.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHH
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l 68 (220)
+.+..++...-+.|+|++++.++.++++. + -+.+-...++.+|-. .+....+...+
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~---~--~~~~~~~~~~~~~~~-~~~~~~A~~~~ 61 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWEL---H--KDITYLNNRAAAEYE-KGEYETAISTL 61 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---S--CCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHh---h--ccHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 56677888888899999999999988872 2 233444455554433 23333444443
No 96
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=67.85 E-value=15 Score=25.31 Aligned_cols=24 Identities=17% Similarity=-0.011 Sum_probs=11.0
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHhh
Q 027700 180 LNFSVFYYEILNSSEKACTMAKQVC 204 (220)
Q Consensus 180 LN~SVF~yEi~~~~~~A~~iAk~Af 204 (220)
.|.+..++. +|+.++|+...++|.
T Consensus 42 ~~~a~~~~~-~~~~~~A~~~~~~al 65 (126)
T 3upv_A 42 SNRAAALAK-LMSFPEAIADCNKAI 65 (126)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 333333333 455555555544444
No 97
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=67.18 E-value=15 Score=26.19 Aligned_cols=48 Identities=4% Similarity=-0.055 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.|.+.|++|+++ .|.+| ....|.+..|+. +|+.++|+..-++|+..
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 35688889998864 45554 345666676666 89999999998888753
No 98
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=66.92 E-value=17 Score=25.82 Aligned_cols=49 Identities=8% Similarity=-0.126 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++...-
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~p 112 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKVKP 112 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHhCC
Confidence 4567777777654 34444 345566666666 7999999999888876543
No 99
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=66.91 E-value=17 Score=24.58 Aligned_cols=50 Identities=8% Similarity=0.007 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHG 209 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (220)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++...-.
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~p~ 116 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALDLDSS 116 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHhCCC
Confidence 5678888888764 34443 345666666666 79999999999998865433
No 100
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=66.44 E-value=32 Score=24.39 Aligned_cols=163 Identities=15% Similarity=0.137 Sum_probs=82.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHH
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLV 87 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i 87 (220)
-+..++....+.|+|++++..+++++.. .+. +..-...++.+|- ..+....+...+....+..... ........
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~---~~~-~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a 83 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDA---DAF-DVDVALHLGIAYV-KTGAVDRGTELLERSLADAPDN-VKVATVLG 83 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCT---TSC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh---Ccc-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCC-HHHHHHHH
Confidence 3456788888899999999999988762 133 3444444454443 2344455555554332221110 11111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 027700 88 KDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (220)
Q Consensus 88 ~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (220)
.-|.. .=-++-....+.++.+ -|. ...+ +...|..|.-. |+ .+.|...|+++++.
T Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~-----~~~----~~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~--- 139 (186)
T 3as5_A 84 LTYVQVQKYDLAVPLLIKVAEA-----NPI----NFNV--RFRLGVALDNL-----GR-----FDEAIDSFKIALGL--- 139 (186)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH-----CTT----CHHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CcH----hHHH--HHHHHHHHHHc-----Cc-----HHHHHHHHHHHHhc---
Confidence 11111 1112222333333322 121 1122 22334433221 11 35678888888764
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 167 DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 167 ~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.|.+| ....+.+..++. .|+.++|....+++.+.
T Consensus 140 --~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 140 --RPNEG---KVHRAIAFSYEQ-MGRHEEALPHFKKANEL 173 (186)
T ss_dssp --CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred --Cccch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Confidence 24443 344556666665 79999999999888754
No 101
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=66.15 E-value=31 Score=36.65 Aligned_cols=30 Identities=20% Similarity=0.027 Sum_probs=22.8
Q ss_pred HHHHHHHHhCChHHHHHHHHHhh--ccccccc
Q 027700 182 FSVFYYEILNSSEKACTMAKQVC--FIPHGCQ 211 (220)
Q Consensus 182 ~SVF~yEi~~~~~~A~~iAk~Af--d~ai~~~ 211 (220)
--+-+|+-.|..++|+.+..+|. +.|+..+
T Consensus 1285 eli~yYe~~G~feEAI~LlE~aL~LeraH~gm 1316 (1630)
T 1xi4_A 1285 ELINYYQDRGYFEELITMLEAALGLERAHMGM 1316 (1630)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccChhHhHH
Confidence 45677899999999999999984 3444433
No 102
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=66.07 E-value=20 Score=23.37 Aligned_cols=50 Identities=12% Similarity=-0.116 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHG 209 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (220)
+.|...|++|++. .|.+| ....+.+..++. +|+.++|....+++....-.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~ 104 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALEF-LNRFEEAKRTYEEGLKHEAN 104 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHcCCC
Confidence 4577888888764 34454 345666666665 89999999999998875433
No 103
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=65.78 E-value=19 Score=24.10 Aligned_cols=50 Identities=16% Similarity=0.309 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
.+.|...|++|++. .|.+| ....+.+..++. .|+.++|+...+++.+..-
T Consensus 20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 35678888888764 34443 445666777766 7999999999998887643
No 104
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=65.49 E-value=8.9 Score=33.34 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHhhc--------CCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTD--------LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~--------L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
-+.|...|++|+++.... ....+|....+.+|.+..|+. +++.++|+...++|+...
T Consensus 239 ~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 239 WEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHhC
Confidence 356888899998865431 111567778888899988887 799999999999988754
No 105
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=65.38 E-value=18 Score=24.95 Aligned_cols=15 Identities=13% Similarity=0.246 Sum_probs=7.0
Q ss_pred hCChHHHHHHHHHhh
Q 027700 190 LNSSEKACTMAKQVC 204 (220)
Q Consensus 190 ~~~~~~A~~iAk~Af 204 (220)
+|+.++|+...++|.
T Consensus 56 ~~~~~~A~~~~~~al 70 (137)
T 3q49_B 56 MQQPEQALADCRRAL 70 (137)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHH
Confidence 444444444444443
No 106
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=64.89 E-value=17 Score=26.80 Aligned_cols=50 Identities=14% Similarity=0.250 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
-+.|.+.|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++....-
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~ 70 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVVLDT 70 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCc
Confidence 35688999999864 45554 334455555555 7899999888887765443
No 107
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=64.74 E-value=39 Score=26.00 Aligned_cols=49 Identities=12% Similarity=0.019 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|+++ .|.+| ....+.+..|+. +|+.++|+...++++...
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHHhC
Confidence 34567777777653 34443 233444555555 788888888888877643
No 108
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=64.42 E-value=20 Score=24.72 Aligned_cols=48 Identities=6% Similarity=-0.034 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+..-++++...
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5688889988864 45554 345666666666 899999999988887654
No 109
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=63.89 E-value=38 Score=24.43 Aligned_cols=48 Identities=6% Similarity=-0.182 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|...|++|+++ .|.+| ...++.+..|+. +|+.++|+..-++|+...
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhcC
Confidence 5677888888764 45554 345556666666 899999999988887543
No 110
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=63.47 E-value=22 Score=24.18 Aligned_cols=48 Identities=13% Similarity=-0.065 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.|...|++|+.+ .|.++ ....+.+..|.. +|+.++|+...++|+..
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688889988864 34443 344566666666 79999999998888764
No 111
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=62.10 E-value=25 Score=26.48 Aligned_cols=50 Identities=26% Similarity=0.318 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc-------------hhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHP-------------IRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p-------------irLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|++|+++. |.+| +...+..|.+..++. +|+.++|+....+|...
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 45788888887643 3344 123566777887776 79999999998888764
No 112
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=61.56 E-value=25 Score=23.34 Aligned_cols=26 Identities=15% Similarity=0.073 Sum_probs=15.0
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 180 LNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 180 LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.+..++. .|+.++|+...+++...
T Consensus 84 ~~~~~~~~~-~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 84 GRMGLALSS-LNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hCCHHHHHHHHHHHHhc
Confidence 444444444 56777776666666554
No 113
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=60.75 E-value=26 Score=23.21 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=9.6
Q ss_pred HHHHHHHhCCHHHHHHHHHHHh
Q 027700 12 LAKLAEQAERYEEMVKFMDSLV 33 (220)
Q Consensus 12 ~Aklaeq~eRy~Dm~~~mk~~i 33 (220)
++......|+|++++.++++++
T Consensus 18 ~~~~~~~~~~~~~A~~~~~~~~ 39 (131)
T 2vyi_A 18 EGNEQMKVENFEAAVHFYGKAI 39 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHH
Confidence 3344444444444444444443
No 114
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=60.75 E-value=28 Score=22.69 Aligned_cols=51 Identities=18% Similarity=0.166 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHG 209 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (220)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...+++....-.
T Consensus 20 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~ 70 (118)
T 1elw_A 20 IDDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPD 70 (118)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHhCcc
Confidence 35678888888753 34454 345556666666 79999999999998875433
No 115
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=60.69 E-value=20 Score=26.28 Aligned_cols=47 Identities=9% Similarity=-0.010 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|..+|++|+.+ .|.||. ..+|.++.|.. +|+.++|+...++|...
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5688999999864 466663 45677777777 89999999988887653
No 116
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=59.67 E-value=54 Score=24.73 Aligned_cols=49 Identities=6% Similarity=-0.049 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|++. .|.+| ....+.+..++. +|+.++|....++|+...
T Consensus 189 ~~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 189 FPEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CHHHH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHhC
Confidence 35678888888764 34444 345566666666 799999999999887765
No 117
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=59.61 E-value=58 Score=25.08 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=42.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieq 73 (220)
+.+..+|...-+.|+|++++..+++++... ++.+...+-...+..+|-. .+....+...+....+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 466778889999999999999999999731 2223444555556666533 4555666666654433
No 118
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=59.32 E-value=27 Score=28.87 Aligned_cols=73 Identities=16% Similarity=0.121 Sum_probs=45.8
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027700 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (220)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eil~lId~~L 113 (220)
|+||.|-|.=|....|...-.-|.+.|-+..--...- +.-.....+-++-.++.++|+..+.++.+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~l-Kk~~K~~~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDL-KKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888887752111000 000000012244556667777777777777777654
No 119
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=59.16 E-value=26 Score=24.72 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
.+..+|....+.|+|++++..+++++.
T Consensus 15 ~~~~~a~~~~~~~~~~~A~~~~~~al~ 41 (166)
T 1a17_A 15 ELKTQANDYFKAKDYENAIKFYSQAIE 41 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 455667777777888888877777775
No 120
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=58.22 E-value=26 Score=25.53 Aligned_cols=47 Identities=9% Similarity=0.060 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
++|.+.|++|+++ .|.|| ....|.+..|.. +|+.++|+..-++|++.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYEL-EENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCchHHHHHHHHHHHHh
Confidence 4577777777653 44554 233444555554 68888888777777654
No 121
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=57.78 E-value=23 Score=19.98 Aligned_cols=27 Identities=22% Similarity=0.446 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 027700 85 SLVKDYRSKVESELSDVCGSILKLLDS 111 (220)
Q Consensus 85 ~~i~~yk~ki~~EL~~~C~eil~lId~ 111 (220)
+.+..||.+|.+.|..+.+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 456889999999999999988777643
No 122
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=57.62 E-value=1.3e+02 Score=28.65 Aligned_cols=132 Identities=11% Similarity=0.137 Sum_probs=74.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhH
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~ 85 (220)
-+-+..++.+..+.|+|++++.+.++.++. +|+. .+=.+-|..+|.. .|. ..+
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l---~P~~-~~a~~nLg~~l~~---------------------~g~--~~~ 95 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRI---SPTF-ADAYSNMGNTLKE---------------------MQD--VQG 95 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTC-HHHHHHHHHHHHH---------------------TTC--HHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC-HHHHHHHHHHHHH---------------------cCC--HHH
Confidence 345678899999999999999999999983 3553 2222222222211 111 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHh
Q 027700 86 LVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (220)
Q Consensus 86 ~i~~yk~ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (220)
.++.|++-+ ++ -|.. ..+ +...|..|+-+- + .++|..+|++|+++
T Consensus 96 A~~~~~kAl------------~l-----~P~~----~~a--~~~Lg~~~~~~g-----~-----~~eAi~~~~~Al~l-- 140 (723)
T 4gyw_A 96 ALQCYTRAI------------QI-----NPAF----ADA--HSNLASIHKDSG-----N-----IPEAIASYRTALKL-- 140 (723)
T ss_dssp HHHHHHHHH------------HH-----CTTC----HHH--HHHHHHHHHHTT-----C-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHHHH------------Hh-----CCCC----HHH--HHHHHHHHHHcC-----C-----HHHHHHHHHHHHHh--
Confidence 344444432 21 1321 122 222344433221 1 46789999999864
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.|.+|- ...|.+..+.. +|+.++|++..+++.+.
T Consensus 141 ---~P~~~~---a~~~L~~~l~~-~g~~~~A~~~~~kal~l 174 (723)
T 4gyw_A 141 ---KPDFPD---AYCNLAHCLQI-VCDWTDYDERMKKLVSI 174 (723)
T ss_dssp ---CSCCHH---HHHHHHHHHHH-TTCCTTHHHHHHHHHHH
T ss_pred ---CCCChH---HHhhhhhHHHh-cccHHHHHHHHHHHHHh
Confidence 456653 34455555444 79888888877776653
No 123
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=57.52 E-value=33 Score=22.46 Aligned_cols=26 Identities=15% Similarity=0.246 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 180 LNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 180 LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.+..++. .|+.++|....+++++.
T Consensus 81 ~~la~~~~~-~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 81 YNLGNAYYK-QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 344444444 56666666665555543
No 124
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=57.11 E-value=31 Score=23.66 Aligned_cols=48 Identities=10% Similarity=0.128 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++|+...
T Consensus 60 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 107 (137)
T 3q49_B 60 EQALADCRRALEL-----DGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLA 107 (137)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CchhH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHC
Confidence 4578888888764 34444 345666777666 799999999998887654
No 125
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.69 E-value=30 Score=23.81 Aligned_cols=49 Identities=8% Similarity=-0.063 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
++|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++...-
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p 130 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVSLEP 130 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCC
Confidence 5678888888764 34553 344566666666 7999999999998876543
No 126
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=56.57 E-value=35 Score=22.33 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 9 li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+..++.+..+.|+|++++..+++++.
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~ 37 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALE 37 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33445555555555555555555443
No 127
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=55.85 E-value=23 Score=27.68 Aligned_cols=54 Identities=13% Similarity=0.012 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhh--cCCCCCchhH-HHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 151 ENTMLSYKAAQDIALT--DLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~--~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
+.|..+|.+|+++-.. ++.|.++--+ .-..|-++-+.. +|+.++|+.--++|..
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDG-LGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 4578888888886222 4566665211 111344444444 8999999988777754
No 128
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=55.14 E-value=11 Score=31.83 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcC-------CCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDL-------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L-------~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
-+.|...|++|+++....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+..
T Consensus 163 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 163 YKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 3567778888876532110 00134556677777777777 68888888887777653
No 129
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=55.06 E-value=31 Score=25.16 Aligned_cols=50 Identities=8% Similarity=-0.031 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPHG 209 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai~ 209 (220)
+.|...|++|+++ .|.+| ....+.+..++. .|+.++|+...++++...=.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHhhCCC
Confidence 5578888888764 44554 455667777777 79999999999998876543
No 130
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=53.75 E-value=32 Score=25.67 Aligned_cols=48 Identities=8% Similarity=0.077 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.|...|++|+.+ .|.+| ....|.+..|+. +|+.++|+...++|++.
T Consensus 53 ~~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 53 MTEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHHh
Confidence 35688899998865 34444 455677777777 89999999999988874
No 131
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=53.73 E-value=22 Score=31.50 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHhhcCC--------CCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLA--------PTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~--------pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
-+.|...|++|+++... .+ ..+|.+..+.+|.+..|+. +++.++|+...++|+..
T Consensus 284 ~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 284 YMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhc
Confidence 35688899999876532 11 0245677888899998888 79999999999888764
No 132
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=53.43 E-value=94 Score=25.59 Aligned_cols=28 Identities=14% Similarity=0.302 Sum_probs=19.6
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+-+..++.+..+.|+|++++..+++++.
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~ 95 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALR 95 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3455667777777777777777777765
No 133
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=53.28 E-value=44 Score=26.94 Aligned_cols=73 Identities=18% Similarity=0.223 Sum_probs=45.4
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027700 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (220)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eil~lId~~L 113 (220)
|+||.|-|.=|.--.|...-.-|.+.|-+..--...- +.......+-++-.++.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKI-KEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999889888888888888742111000 000000012244555667777777777777776654
No 134
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=52.73 E-value=30 Score=28.20 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 180 LNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 180 LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
.|.+..|+. +|+.++|....++|+.
T Consensus 76 ~~lg~~~~~-~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 76 FFLGQCQLE-MESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 334443333 4555555555555543
No 135
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=52.59 E-value=56 Score=30.16 Aligned_cols=47 Identities=23% Similarity=0.394 Sum_probs=30.2
Q ss_pred hcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH------HHHHHH
Q 027700 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF------SVFYYE 188 (220)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~------SVF~yE 188 (220)
-||..||.... ..|...|++|..+.=.+=.|. -.||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G~~~--nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSNGQPY--NQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTBSHHH--HHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCCCchH--HHHHHHHhcccccHHHHHHHH
Confidence 79999999763 578999999986532111111 456655444 677664
No 136
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=52.53 E-value=18 Score=24.47 Aligned_cols=47 Identities=19% Similarity=0.153 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|++|++ +.|.+ .....+.+..++. .|+.++|+...++|...
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 457788888864 34444 3445666666666 79999999999988764
No 137
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=52.25 E-value=36 Score=25.58 Aligned_cols=47 Identities=9% Similarity=-0.043 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|++|+++ .|.+| ...++.+..|+. +|+.++|+...++|+..
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANMY-FGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHHH
Confidence 5678888888865 34443 445666777666 79999999998888754
No 138
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=51.74 E-value=46 Score=26.83 Aligned_cols=73 Identities=15% Similarity=0.195 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027700 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (220)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eil~lId~~L 113 (220)
|+||.|-|.=|.--.|...-.-|.+.|-+..--...- +.......+-++-.++.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKV-KALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999888888888888888742111000 000000012244555666777777777666666544
No 139
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=51.39 E-value=36 Score=26.12 Aligned_cols=29 Identities=10% Similarity=0.174 Sum_probs=26.2
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
-+.++..+..+-+.|+|++++..+.+++.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA 32 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46788899999999999999999999987
No 140
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=51.30 E-value=49 Score=26.69 Aligned_cols=73 Identities=21% Similarity=0.176 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027700 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (220)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eil~lId~~L 113 (220)
|+||.|-|.=|.--.|...-.-|.+.|-+..--...- +.......+-++-.++.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDL-KALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999888888888888888742111000 000000012244555666777777777777666654
No 141
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=51.14 E-value=36 Score=27.49 Aligned_cols=176 Identities=14% Similarity=0.072 Sum_probs=84.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-----HhhhhhhhhHHHHHHh-hhhhhhcccc
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAY-----KNVIGSLRAAWRIISS-IEQKEEGRKN 80 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvay-----Kn~i~~~R~s~R~l~s-ieqk~~~~~~ 80 (220)
+.+...+...-..|+|+++++..++.++. .+. ..+....+..-+ -...+..-.|...+.. ++........
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 151 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKK---EEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT---CCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcc---ccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch
Confidence 34556677777889999999999998872 133 333322221111 1111233344444322 1111111101
Q ss_pred hhhh----HHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHH
Q 027700 81 EEHV----SLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (220)
Q Consensus 81 ~~~~----~~i~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (220)
.... .+..-|.. .=-++-....+..+++.+. .|. ++...+..+-..|..|..+-+ -++|..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~ 217 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLDSR----------YEESLY 217 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHHhh----------HHHHHH
Confidence 0001 11111111 1123444555566655543 232 111111222334555432221 467899
Q ss_pred HHHHHHHHHhhcCCCCCchhHHH-HHHHHHHHHHHhCChHHH-HHHHHHhh
Q 027700 156 SYKAAQDIALTDLAPTHPIRLGL-ALNFSVFYYEILNSSEKA-CTMAKQVC 204 (220)
Q Consensus 156 aY~~A~~~a~~~L~pt~pirLgL-~LN~SVF~yEi~~~~~~A-~~iAk~Af 204 (220)
.|++|++++.. ..++..++. ..|.+..|+. +|+.++| ...-++|.
T Consensus 218 ~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~-~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 218 QVNKAIEISCR---INSMALIGQLYYQRGECLRK-LEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHH
Confidence 99999999853 233334454 4555665555 8999999 44455554
No 142
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=50.52 E-value=43 Score=23.64 Aligned_cols=49 Identities=10% Similarity=0.035 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIPH 208 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ai 208 (220)
+.|.+.|+++... .|.+| ....+.+..++. .|+.++|+...+++....-
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALDN-LGRFDEAIDSFKIALGLRP 141 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHHH-cCcHHHHHHHHHHHHhcCc
Confidence 4677888888764 33444 344566666665 7999999999999886543
No 143
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=50.24 E-value=27 Score=24.53 Aligned_cols=48 Identities=8% Similarity=0.068 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.+.|..+|++|+++ .|.+|- ...|.++.+.. .|+.++|+...+++...
T Consensus 67 ~~~A~~~~~~al~l-----~P~~~~---~~~~la~~~~~-~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 67 DGLAIIALNHARML-----DPKDIA---VHAALAVSHTN-EHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688999998764 556653 44566666666 79999999988887653
No 144
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=49.83 E-value=53 Score=26.47 Aligned_cols=73 Identities=18% Similarity=0.138 Sum_probs=44.1
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027700 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (220)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eil~lId~~L 113 (220)
|+||.|-|.=|.--.|...-.-|.+.|-+..--...- +.......+-++-.++.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEEL-HRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998888888888888887742111000 000000012244455666677777666666666544
No 145
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=49.26 E-value=31 Score=30.91 Aligned_cols=26 Identities=12% Similarity=-0.123 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 179 ALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 179 ~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
..|.+..|+. +|+.++|....++|..
T Consensus 77 ~~~lg~~~~~-~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 77 YYRRAASNMA-LGKFRAALRDYETVVK 102 (477)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3344444444 4666666665555544
No 146
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=48.68 E-value=45 Score=24.89 Aligned_cols=48 Identities=6% Similarity=0.001 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
-+.|...|++|+. +.|.||- ...|.+..|+. +|+.++|+..-++|...
T Consensus 52 ~~eA~~~~~~al~-----~~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 52 IEEAEVFFRFLCI-----YDFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHhh
Confidence 3568888888875 4566664 34566676776 89999999988888653
No 147
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=47.97 E-value=96 Score=24.10 Aligned_cols=63 Identities=21% Similarity=0.146 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhh---------hhhhhhHHHHHHhhhh
Q 027700 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV---------IGSLRAAWRIISSIEQ 73 (220)
Q Consensus 10 i~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~---------i~~~R~s~R~l~sieq 73 (220)
..+|.+..+.|+|++++..++++++. .++.....+-...+..+|.+. .+....|...+..+.+
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~-~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDA-YPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-CTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHH-CCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 67899999999999999999999973 222334566677778888654 2455556666554433
No 148
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=47.66 E-value=89 Score=23.67 Aligned_cols=62 Identities=8% Similarity=-0.052 Sum_probs=42.0
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIE 72 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sie 72 (220)
.+-+..+|.+..+.|+|+++.+.++++++. ++. +..-...++.+|-. .+....+.+.+....
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALAS---DSR-NARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---CcC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 345667889999999999999999999872 243 34455555555543 455566666665443
No 149
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=47.25 E-value=47 Score=26.82 Aligned_cols=73 Identities=22% Similarity=0.210 Sum_probs=45.9
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027700 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (220)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eil~lId~~L 113 (220)
|+||.|-|.=|.--.|...-.-|.+.|-+..--...- +.......+-++-.++.++|+..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999889888888888888742111100 000000112245556677777777777777777654
No 150
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=46.91 E-value=85 Score=23.21 Aligned_cols=57 Identities=11% Similarity=-0.026 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhhcC--------CCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDL--------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--------~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|+++...+- ...+|-......|.+..|+. +|+.++|....++|....
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATSMK 151 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHHcC
Confidence 3568888998886432100 00334555667788888777 799999999998887653
No 151
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=45.01 E-value=67 Score=21.49 Aligned_cols=60 Identities=10% Similarity=0.069 Sum_probs=42.1
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 027700 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (220)
Q Consensus 5 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (220)
.-.-+..++.+..+.|+|++++.++++++.. +|. +.+=...+..+|.. .+....+...+.
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~-~~~~~~~la~~~~~-~g~~~~A~~~~~ 77 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDF---DPT-YSVAWKWLGKTLQG-QGDRAGARQAWE 77 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHH---CCC-cHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3455678899999999999999999999972 244 34555666777654 455555555554
No 152
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=44.69 E-value=58 Score=23.61 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|++|+. +.|.+|.- ..|.+..++. +|+.++|+...++|...
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 457777887764 45666643 3566666666 89999999999988754
No 153
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=44.63 E-value=79 Score=25.42 Aligned_cols=70 Identities=14% Similarity=0.168 Sum_probs=46.8
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 027700 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (220)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk~ki~~EL~~~C~eil~lId~~L 113 (220)
|+||.|-|.=|.--.|...-.-|.+.|-+..--...-.+ .. +.-++-.++.++|+..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk-~~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEE-LE---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ST---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998888888888874211111000 00 12355556677777777777777777654
No 154
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.15 E-value=35 Score=23.52 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=19.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
.-++.++.++.+.|+|++++.+..++.+
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4456677777777777777777777776
No 155
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=43.52 E-value=73 Score=24.47 Aligned_cols=50 Identities=14% Similarity=0.132 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
-+.|...|+++++ ..|.+|..-...++.+..|+. .|+.++|+...+++.+
T Consensus 20 ~~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 20 WRQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 3557777777764 356777665666666666666 8999999998888765
No 156
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=43.29 E-value=46 Score=25.92 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=43.7
Q ss_pred hcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHHHHHHHHHHH----HHHhCChHHHHHHHHH
Q 027700 130 KGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNFSVFY----YEILNSSEKACTMAKQ 202 (220)
Q Consensus 130 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgL~LN~SVF~----yEi~~~~~~A~~iAk~ 202 (220)
.|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|++.-++
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~k 116 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQ 116 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHH
Confidence 4555555666777777777889999999999864 55555 3455554321111 1112567777776666
Q ss_pred hhc
Q 027700 203 VCF 205 (220)
Q Consensus 203 Afd 205 (220)
|++
T Consensus 117 Al~ 119 (158)
T 1zu2_A 117 AVD 119 (158)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 157
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=43.24 E-value=31 Score=25.14 Aligned_cols=48 Identities=15% Similarity=0.137 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
.++|..+|+.|.. .+|.+| ...++.+..|++ .|+.++|+...++|...
T Consensus 13 ~e~ai~~~~~a~~-----~~p~~~---~~~~~la~~y~~-~~~~~~A~~~~~~al~~ 60 (150)
T 4ga2_A 13 VERYIASVQGSTP-----SPRQKS---IKGFYFAKLYYE-AKEYDLAKKYICTYINV 60 (150)
T ss_dssp HHHHHHHHHHHSC-----SHHHHH---TTHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-----cCcccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 4566666666642 333333 345677888888 79999999999888754
No 158
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=41.72 E-value=75 Score=22.06 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
.+.|...|++|+. +.|.|| ....+.++.+.. +|+.++|+...++|....
T Consensus 33 ~~~A~~~~~~al~-----~~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 81 (121)
T 1hxi_A 33 LAEAALAFEAVCQ-----KEPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARMLD 81 (121)
T ss_dssp HHHHHHHHHHHHH-----HSTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-----HCCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 3567888888875 345554 334556666666 799999999988887653
No 159
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=40.41 E-value=1e+02 Score=22.31 Aligned_cols=73 Identities=7% Similarity=-0.094 Sum_probs=46.4
Q ss_pred hHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHH-HHHHHHHHHhCChHHHHHHH
Q 027700 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLAL-NFSVFYYEILNSSEKACTMA 200 (220)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~L-N~SVF~yEi~~~~~~A~~iA 200 (220)
..+..+-..|..|...-+ .+.|...|++|++++.. . .+|...+.++ |.+..+.. .|++++|....
T Consensus 105 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 170 (203)
T 3gw4_A 105 AASANAYEVATVALHFGD----------LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQ-EKNLLEAQQHW 170 (203)
T ss_dssp HHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHH-CcCHHHHHHHH
Confidence 334444555655544322 45689999999998763 2 2444445444 44544544 89999999999
Q ss_pred HHhhcccc
Q 027700 201 KQVCFIPH 208 (220)
Q Consensus 201 k~Afd~ai 208 (220)
++|++.+-
T Consensus 171 ~~al~~~~ 178 (203)
T 3gw4_A 171 LRARDIFA 178 (203)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887543
No 160
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=39.56 E-value=1.1e+02 Score=28.57 Aligned_cols=65 Identities=18% Similarity=0.004 Sum_probs=42.3
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH-------------hCChHHHHHHHHHh
Q 027700 138 AEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEI-------------LNSSEKACTMAKQV 203 (220)
Q Consensus 138 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi-------------~~~~~~A~~iAk~A 203 (220)
+|...++.-.+.+++|.++|++|++..++--..-+|--.-.+||-|= .||. .|.-+.|-.++++|
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak-~yE~aGDyy~~AA~k~~yG~~eqAe~l~~~A 513 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAK-KHEMAGDYYVNAARKALNGDLEQAKIDAEKA 513 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhh-hhhhccHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 56666777778899999999999999975333445544444444432 3665 45556666666554
No 161
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=38.57 E-value=2e+02 Score=25.16 Aligned_cols=47 Identities=11% Similarity=0.075 Sum_probs=36.8
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV 57 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~ 57 (220)
-+-+..++.+..+.|+|++++.++.++++. +|. .+-...++.+|...
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~--~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALTH---CKN--KVSLQNLSMVLRQL 183 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT---CCC--HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CCC--HHHHHHHHHHHHHh
Confidence 345678899999999999999999999972 365 56667777777654
No 162
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=36.08 E-value=66 Score=23.48 Aligned_cols=50 Identities=16% Similarity=0.238 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhh----------------hhhhHHHHHHhh
Q 027700 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG----------------SLRAAWRIISSI 71 (220)
Q Consensus 20 eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~----------------~~R~s~R~l~si 71 (220)
++|+.+++.++.+-. .+...++.+++-.|-.-||.... .+..||..+..+
T Consensus 10 ~~F~~A~~~vk~l~~--~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gm 75 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPK--NGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKM 75 (106)
T ss_dssp HHHHHHHHHHHHSCS--SCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCC
Confidence 678899999988654 11236899999988888888753 256777776533
No 163
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=34.87 E-value=22 Score=25.71 Aligned_cols=58 Identities=12% Similarity=0.240 Sum_probs=35.4
Q ss_pred hHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH----HHHHHHHHH
Q 027700 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLG----LALNFSVFY 186 (220)
Q Consensus 122 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg----L~LN~SVF~ 186 (220)
+.+|+ .|+.--|+-.+...-+ .-+....+..+.|++-- +..|.||..|+ +.-+|++|+
T Consensus 6 ~~~~~---~~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~R 67 (92)
T 2g0u_A 6 TPLLA---DYEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYR 67 (92)
T ss_dssp CCCTT---SSSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHh---cCcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 44454 3444456655544321 12455667777777543 36899999998 566777764
No 164
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=34.52 E-value=80 Score=26.42 Aligned_cols=49 Identities=12% Similarity=-0.050 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
-+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+...
T Consensus 212 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 212 FSAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHHHC
Confidence 35678888888864 34554 344566666666 799999999888887643
No 165
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=33.98 E-value=95 Score=20.00 Aligned_cols=30 Identities=23% Similarity=0.171 Sum_probs=26.1
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 5 ~re~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+-+.+..++......|+|++++....+++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 345677888999999999999999999997
No 166
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=33.93 E-value=35 Score=28.80 Aligned_cols=50 Identities=18% Similarity=0.139 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------hhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHP--------------IRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p--------------irLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+..
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~ 259 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLTE 259 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 45778888887643 2333 122467888888877 79999999998888754
No 167
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=32.53 E-value=64 Score=28.77 Aligned_cols=14 Identities=29% Similarity=0.672 Sum_probs=5.4
Q ss_pred CCHHHHHHHHHHHh
Q 027700 20 ERYEEMVKFMDSLV 33 (220)
Q Consensus 20 eRy~Dm~~~mk~~i 33 (220)
|+|++++++.++.+
T Consensus 20 g~~~~A~~~~~~Al 33 (477)
T 1wao_1 20 KDYENAIKFYSQAI 33 (477)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 33333333333333
No 168
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=32.44 E-value=1.4e+02 Score=21.35 Aligned_cols=26 Identities=8% Similarity=0.144 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 9 li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+..++.++.+.|+|++++.++.++++
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~ 39 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALS 39 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34445555555555555555555554
No 169
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=31.23 E-value=1.1e+02 Score=20.11 Aligned_cols=58 Identities=14% Similarity=0.118 Sum_probs=39.8
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHH
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l 68 (220)
-.-+..++.+..+.|+|++++.+++++++. +|.. ..=...++.+|.. .+..-.+...+
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~ 64 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVET---DPDY-VGTYYHLGKLYER-LDRTDDAIDTY 64 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---STTC-THHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCc-HHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 345678899999999999999999999983 2553 3345566666644 34444444444
No 170
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=30.62 E-value=2.3e+02 Score=23.32 Aligned_cols=108 Identities=19% Similarity=0.299 Sum_probs=63.3
Q ss_pred HHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHH
Q 027700 12 LAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYR 91 (220)
Q Consensus 12 ~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk 91 (220)
.|++.+....|-.|++-+|.-.. +..|-.|.=.-||=.+... |.+. + . ...|++-.
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdEL----------EK~~--K-d---SeKI~RNQ 155 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDNL----------EKKN--K-D---QERIERNQ 155 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHH----------HHHT--C-C---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHHH----------Hhcc--c-h---HHHHHHhH
Confidence 57888888888888888865332 1346667767777655432 2211 1 1 12223322
Q ss_pred H---HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHHHhh
Q 027700 92 S---KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (220)
Q Consensus 92 ~---ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (220)
. +-+.--..+|-|+|+-.++ +-|.|+|-++|..+. +=...--|-.|++.|..
T Consensus 156 sKLssAEtaYkqvcsDiInkMnk-----------------ll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 156 QKFKDAEAAYSSVCADLIQKMET-----------------VWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred HHhhhHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 3 3344555678777776654 357788888886543 22234457788887753
No 171
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=28.06 E-value=2.5e+02 Score=22.93 Aligned_cols=26 Identities=12% Similarity=0.020 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 179 ALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 179 ~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
..+.+..+.. .|+.++|+...++++.
T Consensus 206 ~~~lg~~~~~-~~~~~~A~~~~~~al~ 231 (388)
T 1w3b_A 206 YINLGNVLKE-ARIFDRAVAAYLRALS 231 (388)
T ss_dssp HHHHHHHHHT-TTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 3344444333 5666666666666554
No 172
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=27.63 E-value=3.7e+02 Score=24.85 Aligned_cols=46 Identities=11% Similarity=-0.096 Sum_probs=33.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYK 55 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayK 55 (220)
.+-+..+|.+..+.|+|++++..+.++++. +|+ +.+-...+..+|-
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~---~p~-~~~a~~~lg~~~~ 478 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAER---VGW-RWRLVWYRAVAEL 478 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---HCC-CHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhcc---Ccc-hHHHHHHHHHHHH
Confidence 456778899999999999999999999972 233 3444455555443
No 173
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=27.21 E-value=79 Score=21.84 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+++..|=-.+++|+|++++.+.++.++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344555556788999999988887775
No 174
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=26.29 E-value=1.2e+02 Score=21.75 Aligned_cols=50 Identities=14% Similarity=0.236 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCh--HHHHHHHHHhhccc
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSS--EKACTMAKQVCFIP 207 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~--~~A~~iAk~Afd~a 207 (220)
.+.|...|++|+++. |.+| ....+.+..+|.-.|+. ++|....+++....
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~ 111 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALALD 111 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhC
Confidence 356889999998754 4454 24456666645457887 99999988887654
No 175
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=25.04 E-value=1.3e+02 Score=26.75 Aligned_cols=16 Identities=6% Similarity=-0.062 Sum_probs=0.0
Q ss_pred hCCHHHHHHHHHHHhh
Q 027700 19 AERYEEMVKFMDSLVT 34 (220)
Q Consensus 19 ~eRy~Dm~~~mk~~i~ 34 (220)
.|++++++..++++++
T Consensus 2 ~g~~~~A~~~~~~al~ 17 (568)
T 2vsy_A 2 TADGPRELLQLRAAVR 17 (568)
T ss_dssp ----------------
T ss_pred CccHHHHHHHHHHHHH
Confidence 4678888888888776
No 176
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=24.90 E-value=1.3e+02 Score=18.87 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 9 li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+..++.+..+.|+|++++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34455555555666666666665554
No 177
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=24.15 E-value=3.7e+02 Score=23.68 Aligned_cols=29 Identities=7% Similarity=-0.116 Sum_probs=25.3
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
-+-+..+|.+..+.|+|+++++++++.++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 51 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLA 51 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34567788999999999999999999997
No 178
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=24.14 E-value=3.4e+02 Score=23.26 Aligned_cols=58 Identities=17% Similarity=0.263 Sum_probs=37.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhh-hhhHHHHHH
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGS-LRAAWRIIS 69 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~-~R~s~R~l~ 69 (220)
+-+.+++.+..+.|+|++++....+++.. +|. +.+=.+.+..++... +. ...+...+.
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l---~P~-~~~a~~~~g~~l~~~-g~d~~eAl~~~~ 156 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIEL---NAA-NYTVWHFRRVLLKSL-QKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHh---Ccc-CHHHHHHHHHHHHHc-ccCHHHHHHHHH
Confidence 44567888888899999999999999983 254 344455555555443 32 444544443
No 179
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=23.55 E-value=2.1e+02 Score=20.65 Aligned_cols=166 Identities=8% Similarity=-0.068 Sum_probs=85.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccc-hhhh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN-EEHV 84 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieqk~~~~~~-~~~~ 84 (220)
.+-+..++.+..+.|+|++++.++.+++.. ++. +.+-...+..+|-...+....+...+....+....... ....
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 117 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSI---KPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANL 117 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHh---CCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHH
Confidence 345667888999999999999999999872 233 44555556666654325556666666544331110000 1111
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 027700 85 SLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI 163 (220)
Q Consensus 85 ~~i~~yk~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 163 (220)
....-|.. .--++-...+...+++ -|. . ...+...|+.|.-. |+ .+.|...|+++++.
T Consensus 118 ~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~-----~-~~~~~~la~~~~~~-----~~-----~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 118 NKGICSAKQGQFGLAEAYLKRSLAA-----QPQ-----F-PPAFKELARTKMLA-----GQ-----LGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-----STT-----C-HHHHHHHHHHHHHH-----TC-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh-----CCC-----C-chHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh
Confidence 11111111 1112223333333332 122 1 11122233333211 11 35678888888764
Q ss_pred HhhcCCC-CCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhc
Q 027700 164 ALTDLAP-THPIRLGLALNFSVFYYEILNSSEKACTMAKQVCF 205 (220)
Q Consensus 164 a~~~L~p-t~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (220)
. | .+|..+ +....+|...|+.++|....+.+..
T Consensus 177 ~-----~~~~~~~~----~~~~~~~~~~~~~~~a~~~~~~~~~ 210 (225)
T 2vq2_A 177 V-----EVLQADDL----LLGWKIAKALGNAQAAYEYEAQLQA 210 (225)
T ss_dssp H-----CSCCHHHH----HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred C-----CCCCHHHH----HHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 2 4 455432 3444455668999999888877653
No 180
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=23.35 E-value=1.4e+02 Score=24.87 Aligned_cols=47 Identities=9% Similarity=-0.026 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|++|+++ .|.|+ ....|.+.-|+. +|+.++|+...++|+..
T Consensus 247 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~a~~~-~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 247 DEAIGHCNIVLTE-----EEKNP---KALFRRGKAKAE-LGQMDSARDDFRKAQKY 293 (338)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHT-TTCHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 4578888888764 44554 344566666666 89999999998888754
No 181
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=23.34 E-value=1e+02 Score=21.09 Aligned_cols=27 Identities=19% Similarity=0.431 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
+++..|=-.+++|+|++++.+.++.++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 355556556788999998888877765
No 182
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=23.24 E-value=1.7e+02 Score=23.79 Aligned_cols=47 Identities=9% Similarity=-0.048 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhcc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFI 206 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (220)
+.|...|+++++. .|.+| .+..|.++.+.. +|+.++|...-++|+..
T Consensus 183 ~eA~~~~~~~l~~-----~p~~~---~~~~~la~~~~~-~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPTL---LLLNGQAACHMA-QGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 4455555555542 34443 344455665555 78888888888887764
No 183
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=23.07 E-value=2.2e+02 Score=20.58 Aligned_cols=45 Identities=9% Similarity=0.007 Sum_probs=32.5
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAY 54 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvay 54 (220)
-+.++.+|....+.|+|++++..++++++. +|. +.+=...+..+|
T Consensus 6 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~---~P~-~~~a~~~la~~~ 50 (176)
T 2r5s_A 6 DEQLLKQVSELLQQGEHAQALNVIQTLSDE---LQS-RGDVKLAKADCL 50 (176)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHTSCHH---HHT-SHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---CCC-cHHHHHHHHHHH
Confidence 356888999999999999999999998862 133 334444455444
No 184
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=22.83 E-value=1.6e+02 Score=22.79 Aligned_cols=17 Identities=18% Similarity=0.315 Sum_probs=9.7
Q ss_pred hCChHHHHHHHHHhhcc
Q 027700 190 LNSSEKACTMAKQVCFI 206 (220)
Q Consensus 190 ~~~~~~A~~iAk~Afd~ 206 (220)
.++.++|+...++|.+.
T Consensus 55 ~~~~~~A~~~~~~a~~~ 71 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDL 71 (273)
T ss_dssp CCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHC
Confidence 45666666665555443
No 185
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=21.80 E-value=3.8e+02 Score=22.95 Aligned_cols=49 Identities=10% Similarity=0.173 Sum_probs=30.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG 59 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~ 59 (220)
+-+..++.+..+.|+|++++.++.++++. +|. +..=.+-+..+|...-+
T Consensus 201 ~a~~~lg~~~~~~g~~~eAl~~~~~al~l---~P~-~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 201 HAWQHRQWVIQEFKLWDNELQYVDQLLKE---DVR-NNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHHHHHH---CTT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHh---CCC-CHHHHHHHHHHHHHhcC
Confidence 34456677777778888888888887762 233 44455555555555433
No 186
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=21.79 E-value=1.2e+02 Score=25.89 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCChHHHHHHHHHhhccc
Q 027700 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQVCFIP 207 (220)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (220)
+.|...|++|++ +.|.+| ....+.+..|+. +|+.++|+..-++|....
T Consensus 290 ~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~~-~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 290 QGAVDSCLEALE-----IDPSNT---KALYRRAQGWQG-LKEYDQALADLKKAQEIA 337 (370)
T ss_dssp HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-----hCchhH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHhC
Confidence 457777888774 455554 334556666666 899999999998887653
No 187
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=21.26 E-value=1.1e+02 Score=23.65 Aligned_cols=75 Identities=15% Similarity=0.169 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhhhcccch--hHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 027700 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGD--ERKAAAENTMLSYKAAQDIALTDLAPTHP 173 (220)
Q Consensus 96 ~EL~~~C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~~~a~~aY~~A~~~a~~~L~pt~p 173 (220)
.+|..-...+.+.|...+ .+.+|+++-|--+|.+-+---.++...|. +..++. ...+.|+.-.+-+++.|..+-|
T Consensus 60 p~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK-~~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 60 PELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAK-RLHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHH-HHHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH-HHHHHHHcCCHHHHHHHHHhCc
Confidence 345555556677777776 66789999999998876655555544432 112222 2236676555555554544444
No 188
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=21.23 E-value=1.5e+02 Score=20.81 Aligned_cols=45 Identities=18% Similarity=0.285 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHH--------HHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhh
Q 027700 86 LVKDYRSKVESELSDV--------CGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLA 138 (220)
Q Consensus 86 ~i~~yk~ki~~EL~~~--------C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYla 138 (220)
.+++|...+++-|..+ ..++++++..++ +.-.+|++ |||+-+=++
T Consensus 8 ki~kYi~~leeaL~~i~~~~l~~~a~~~l~mA~~Y~-------~Da~~fl~-kGD~v~Ala 60 (87)
T 2pmr_A 8 RIEKDLELLEKNLMEMKSIKLSDDEEAVVERALNYR-------DDSVYYLE-KGDHITSFG 60 (87)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHH-------HHHHHHHH-TTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHH-------HHHHHHHH-cCCHHHHHH
Confidence 3455555555554443 477888888887 33344444 588754443
No 189
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=20.79 E-value=1.6e+02 Score=18.07 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=41.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhh
Q 027700 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (220)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~sieq 73 (220)
+-+..++.+..+.|+|++++.++++.+.. ++. +.+-...++.+|-. .+....+...+....+
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALEL---DPN-NAEAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc---CCC-CHHHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 34567888899999999999999999872 233 44445556666643 4556666666654333
No 190
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=20.74 E-value=4.5e+02 Score=24.48 Aligned_cols=74 Identities=19% Similarity=0.420 Sum_probs=48.8
Q ss_pred hCCHHHHHHHHHHHhhccCCCCCCCHH---HHHHHH---HHHHhhhhhhhhHHHHHHhhhhhhhcccchhhhHHHHHHHH
Q 027700 19 AERYEEMVKFMDSLVTSSTPATELTVE---ERNLLS---VAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRS 92 (220)
Q Consensus 19 ~eRy~Dm~~~mk~~i~~~~~~~~Ls~e---ERnLls---vayKn~i~~~R~s~R~l~sieqk~~~~~~~~~~~~i~~yk~ 92 (220)
.++|.+-++-+++++.. ......+ |-.+|- .+|..++..-+..+..|..--++|....+.....+++.||.
T Consensus 120 ~~k~g~~l~~v~~~~~~---~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~ 196 (526)
T 3iyk_A 120 KEKFGKELEEVYNFMNG---EANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRD 196 (526)
T ss_pred HHHHHHHHHHHHHHHHH---hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Confidence 35566777777777641 1334443 444554 45667777888888888777777765555566788888888
Q ss_pred HHH
Q 027700 93 KVE 95 (220)
Q Consensus 93 ki~ 95 (220)
++.
T Consensus 197 k~~ 199 (526)
T 3iyk_A 197 KID 199 (526)
T ss_pred HHH
Confidence 764
No 191
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=20.70 E-value=65 Score=22.79 Aligned_cols=46 Identities=13% Similarity=0.395 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHhhhccCCCCCCCchHHHHHhhhcchhhhhh
Q 027700 85 SLVKDYRSKVESELSDV--CGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLA 138 (220)
Q Consensus 85 ~~i~~yk~ki~~EL~~~--C~eil~lId~~Lip~~~~~eskvfy~KmkgDyyRYla 138 (220)
..+++|...+++-|..+ +.++++++..++ +.-.+|++ |||+-+=++
T Consensus 9 Eki~kYi~~l~eaL~~i~~a~~~l~mA~~Y~-------~Da~~fl~-kGD~v~Ala 56 (86)
T 2oo2_A 9 RETLKWLERIEERVKEIEGDEGFMRNIEAYI-------SDSRYFLE-KGDLVRAFE 56 (86)
T ss_dssp HHHHHHHHHHHHHGGGEEECHHHHHHHHHHH-------HHHHHHHH-TTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-------HHHHHHHH-cCCHHHHHH
Confidence 34566777777776665 688999998887 33344454 599755444
No 192
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=20.70 E-value=65 Score=27.88 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCC-------hHHHHHHHHHhh
Q 027700 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNS-------SEKACTMAKQVC 204 (220)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~-------~~~A~~iAk~Af 204 (220)
-++.+++-|+|+.+|...+.|.-++-|= -+||..+||||- |+ .+.=+++.++-+
T Consensus 211 ~krVleCLqkaLkiA~~~~d~~~~v~LfveILn~ylyff~~-g~~~Vt~~~in~LI~lI~~~l 272 (298)
T 2r17_C 211 GKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEK-ENDAVTIQVLNQLIQKIREDL 272 (298)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHTT-TCTTSCHHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHhhhhC-CCCcccHHHHHHHHHHHHHHh
Confidence 3578999999999999887755444333 379999999995 54 334455555433
No 193
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=20.42 E-value=2.5e+02 Score=20.25 Aligned_cols=29 Identities=24% Similarity=0.166 Sum_probs=23.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
.+-+..++.+..+.|+|++++..+.+++.
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 136 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILK 136 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 45566788888888999999999988886
No 194
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=20.33 E-value=2.7e+02 Score=20.69 Aligned_cols=60 Identities=12% Similarity=0.151 Sum_probs=40.3
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 027700 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (220)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~i~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~s 70 (220)
-.-...++.+..+.|+|++++.++.+++. . +|. +.+=...++.+|.. .+....+...+..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~--~-~p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 101 (228)
T 4i17_A 42 SVTAYNCGVCADNIKKYKEAADYFDIAIK--K-NYN-LANAYIGKSAAYRD-MKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--T-TCS-HHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcHHHHHHHHHHHHH--h-Ccc-hHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 34566788899999999999999999997 2 244 44445556666643 3555555555543
No 195
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=20.33 E-value=1.7e+02 Score=18.48 Aligned_cols=26 Identities=8% Similarity=0.071 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhh
Q 027700 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (220)
Q Consensus 9 li~~Aklaeq~eRy~Dm~~~mk~~i~ 34 (220)
.+.+|....+.|+|++++..++++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~ 28 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQ 28 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35678888899999999999999997
No 196
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=20.14 E-value=1.8e+02 Score=23.35 Aligned_cols=23 Identities=9% Similarity=0.039 Sum_probs=9.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHh
Q 027700 11 YLAKLAEQAERYEEMVKFMDSLV 33 (220)
Q Consensus 11 ~~Aklaeq~eRy~Dm~~~mk~~i 33 (220)
.+|....+.|+|++++..+.+++
T Consensus 9 ~~g~~~~~~g~~~~A~~~~~~al 31 (281)
T 2c2l_A 9 EQGNRLFVGRKYPEAAACYGRAI 31 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Confidence 33333344444444444443333
Done!