Query 027701
Match_columns 220
No_of_seqs 179 out of 1558
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 13:53:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027701.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027701hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0546 Gph Predicted phosphat 99.9 5.1E-27 1.1E-31 197.2 15.8 159 1-212 3-168 (220)
2 PRK13226 phosphoglycolate phos 99.9 6.9E-24 1.5E-28 179.0 15.1 158 1-213 11-175 (229)
3 PRK13288 pyrophosphatase PpaX; 99.9 7.6E-23 1.6E-27 170.3 14.8 154 1-213 2-162 (214)
4 PLN03243 haloacid dehalogenase 99.9 1.6E-22 3.5E-27 174.4 15.3 157 2-212 24-188 (260)
5 TIGR03351 PhnX-like phosphonat 99.9 2.9E-22 6.2E-27 167.2 15.9 159 2-213 1-170 (220)
6 PLN02770 haloacid dehalogenase 99.9 3.6E-22 7.8E-27 170.6 15.6 161 1-213 21-188 (248)
7 TIGR01449 PGP_bact 2-phosphogl 99.9 5.2E-22 1.1E-26 164.4 14.8 159 5-214 1-166 (213)
8 PRK13223 phosphoglycolate phos 99.9 1.3E-21 2.9E-26 169.5 15.0 164 1-214 12-182 (272)
9 PLN02575 haloacid dehalogenase 99.9 1.7E-21 3.7E-26 175.5 16.1 156 3-212 132-295 (381)
10 PRK13225 phosphoglycolate phos 99.9 1.4E-21 3.1E-26 169.6 15.2 154 2-213 62-219 (273)
11 PRK11587 putative phosphatase; 99.9 2.1E-21 4.6E-26 162.4 15.3 153 2-213 3-162 (218)
12 TIGR01422 phosphonatase phosph 99.9 3.8E-21 8.1E-26 164.2 16.3 168 2-213 2-181 (253)
13 PRK13478 phosphonoacetaldehyde 99.9 6.2E-21 1.3E-25 164.4 16.5 168 2-213 4-183 (267)
14 TIGR01454 AHBA_synth_RP 3-amin 99.9 1.2E-20 2.7E-25 156.0 14.0 148 5-213 1-155 (205)
15 PRK10826 2-deoxyglucose-6-phos 99.8 1.8E-20 4E-25 156.9 14.6 163 1-216 6-175 (222)
16 TIGR02009 PGMB-YQAB-SF beta-ph 99.8 2.8E-20 6E-25 150.6 14.8 156 2-212 1-165 (185)
17 PRK10725 fructose-1-P/6-phosph 99.8 4.1E-20 8.9E-25 150.3 14.9 152 3-212 6-165 (188)
18 TIGR01990 bPGM beta-phosphoglu 99.8 3.2E-20 6.9E-25 150.3 14.1 161 4-216 1-168 (185)
19 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 2.1E-20 4.6E-25 153.9 12.5 167 3-213 1-185 (197)
20 PRK13222 phosphoglycolate phos 99.8 1.3E-19 2.9E-24 151.0 16.7 163 2-215 6-175 (226)
21 PLN02940 riboflavin kinase 99.8 7.6E-20 1.6E-24 165.7 14.2 158 2-214 11-175 (382)
22 PRK10563 6-phosphogluconate ph 99.8 1.6E-19 3.4E-24 150.9 12.6 156 2-213 4-166 (221)
23 COG0637 Predicted phosphatase/ 99.8 3.4E-19 7.4E-24 150.1 13.1 156 1-210 1-163 (221)
24 PRK10748 flavin mononucleotide 99.8 3.5E-19 7.6E-24 151.2 12.6 174 3-216 11-190 (238)
25 TIGR02253 CTE7 HAD superfamily 99.8 8E-19 1.7E-23 146.2 14.0 79 137-216 92-177 (221)
26 TIGR02252 DREG-2 REG-2-like, H 99.8 7.2E-19 1.6E-23 144.9 13.3 172 3-216 1-187 (203)
27 PRK06698 bifunctional 5'-methy 99.8 5.7E-19 1.2E-23 163.3 14.1 160 1-211 240-405 (459)
28 TIGR01993 Pyr-5-nucltdase pyri 99.8 4.5E-19 9.7E-24 144.3 11.6 78 137-215 82-167 (184)
29 PLN02779 haloacid dehalogenase 99.8 7.3E-19 1.6E-23 153.5 13.7 176 3-214 41-227 (286)
30 PRK09449 dUMP phosphatase; Pro 99.8 2.1E-18 4.6E-23 144.2 14.0 75 137-212 93-174 (224)
31 TIGR02254 YjjG/YfnB HAD superf 99.8 8.4E-18 1.8E-22 139.8 13.5 78 137-216 95-180 (224)
32 PHA02597 30.2 hypothetical pro 99.8 2.8E-18 6.1E-23 141.0 10.1 144 1-212 1-151 (197)
33 PLN02919 haloacid dehalogenase 99.8 1.3E-17 2.7E-22 167.4 15.3 160 2-213 75-242 (1057)
34 PF13419 HAD_2: Haloacid dehal 99.7 1.4E-17 3.1E-22 131.7 8.9 79 137-216 75-160 (176)
35 TIGR01428 HAD_type_II 2-haloal 99.7 7E-17 1.5E-21 132.7 12.9 78 138-216 91-175 (198)
36 PRK14988 GMP/IMP nucleotidase; 99.7 6E-17 1.3E-21 136.5 12.8 78 137-215 91-175 (224)
37 TIGR01549 HAD-SF-IA-v1 haloaci 99.7 1.7E-16 3.7E-21 125.1 14.3 74 137-213 62-141 (154)
38 TIGR02247 HAD-1A3-hyp Epoxide 99.7 4.1E-17 8.9E-22 135.3 8.6 75 137-212 92-175 (211)
39 TIGR01493 HAD-SF-IA-v2 Haloaci 99.7 1.2E-16 2.7E-21 128.5 9.5 75 137-216 88-166 (175)
40 PLN02811 hydrolase 99.6 6.7E-15 1.5E-19 123.3 14.1 151 9-213 1-164 (220)
41 PRK09456 ?-D-glucose-1-phospha 99.6 6.2E-15 1.3E-19 121.6 11.8 77 139-215 84-167 (199)
42 TIGR01509 HAD-SF-IA-v3 haloaci 99.6 1.7E-14 3.6E-19 116.0 13.1 76 138-215 84-166 (183)
43 PRK11590 hypothetical protein; 99.6 7E-15 1.5E-19 122.8 11.0 133 3-186 7-144 (211)
44 TIGR00338 serB phosphoserine p 99.6 1E-13 2.3E-18 115.4 14.0 75 138-213 84-175 (219)
45 TIGR01672 AphA HAD superfamily 99.5 2.9E-14 6.3E-19 121.4 10.0 68 135-204 110-186 (237)
46 PLN02954 phosphoserine phospha 99.5 1.3E-13 2.8E-18 115.2 12.5 71 138-211 83-174 (224)
47 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.5 4.9E-14 1.1E-18 115.2 8.6 76 137-213 78-170 (201)
48 COG1011 Predicted hydrolase (H 99.4 4.2E-12 9E-17 105.8 15.7 80 137-217 97-182 (229)
49 PRK13582 thrH phosphoserine ph 99.4 7.7E-13 1.7E-17 108.9 11.0 73 137-212 66-150 (205)
50 PRK09552 mtnX 2-hydroxy-3-keto 99.4 1.9E-12 4.2E-17 108.4 10.5 74 137-212 72-166 (219)
51 TIGR01662 HAD-SF-IIIA HAD-supe 99.4 1.5E-12 3.3E-17 100.4 8.0 76 138-214 24-111 (132)
52 TIGR01489 DKMTPPase-SF 2,3-dik 99.3 2E-11 4.3E-16 98.6 12.7 71 138-212 71-168 (188)
53 KOG2914 Predicted haloacid-hal 99.3 2.1E-11 4.6E-16 102.8 12.4 152 3-210 11-173 (222)
54 TIGR01685 MDP-1 magnesium-depe 99.3 1.2E-11 2.6E-16 100.8 7.9 79 137-216 43-140 (174)
55 TIGR01656 Histidinol-ppas hist 99.2 1.2E-11 2.6E-16 97.6 6.4 75 138-213 26-125 (147)
56 PRK08942 D,D-heptose 1,7-bisph 99.2 3.7E-11 7.9E-16 97.8 7.9 74 138-214 28-128 (181)
57 TIGR01691 enolase-ppase 2,3-di 99.2 3.5E-10 7.6E-15 95.4 12.9 80 136-218 92-181 (220)
58 PRK11133 serB phosphoserine ph 99.2 3.4E-10 7.3E-15 100.6 13.1 75 137-212 179-270 (322)
59 TIGR01545 YfhB_g-proteo haloac 99.2 7E-10 1.5E-14 92.9 13.8 59 109-176 72-134 (210)
60 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.1 1.1E-09 2.4E-14 89.9 13.5 97 109-215 66-180 (202)
61 TIGR01681 HAD-SF-IIIC HAD-supe 99.1 6.8E-11 1.5E-15 91.5 5.0 74 139-213 29-115 (128)
62 TIGR02137 HSK-PSP phosphoserin 99.1 1.9E-09 4.2E-14 89.8 13.3 43 138-181 67-111 (203)
63 PRK11009 aphA acid phosphatase 99.0 6.9E-10 1.5E-14 94.6 6.5 67 134-204 109-186 (237)
64 TIGR03333 salvage_mtnX 2-hydro 99.0 1.7E-09 3.7E-14 90.3 8.7 73 138-211 69-161 (214)
65 TIGR01488 HAD-SF-IB Haloacid D 99.0 1.8E-09 3.9E-14 86.5 8.1 74 138-212 72-164 (177)
66 COG0560 SerB Phosphoserine pho 99.0 1.1E-08 2.4E-13 85.9 12.3 73 138-211 76-165 (212)
67 TIGR01663 PNK-3'Pase polynucle 98.9 4.2E-09 9E-14 99.0 8.5 70 140-212 198-290 (526)
68 TIGR01261 hisB_Nterm histidino 98.9 3.8E-09 8.3E-14 85.0 6.5 74 136-212 26-126 (161)
69 PF00702 Hydrolase: haloacid d 98.9 6.1E-09 1.3E-13 85.4 7.7 72 137-212 125-201 (215)
70 KOG3085 Predicted hydrolase (H 98.9 1.5E-08 3.2E-13 86.1 9.5 179 2-216 7-195 (237)
71 TIGR01664 DNA-3'-Pase DNA 3'-p 98.8 1.3E-08 2.9E-13 82.2 6.9 73 139-214 42-135 (166)
72 TIGR00213 GmhB_yaeD D,D-heptos 98.8 2.4E-08 5.1E-13 81.0 7.9 73 138-213 25-130 (176)
73 TIGR01686 FkbH FkbH-like domai 98.8 1.3E-08 2.9E-13 90.1 6.3 81 137-219 29-116 (320)
74 smart00577 CPDc catalytic doma 98.7 1.2E-08 2.5E-13 80.8 4.3 77 137-215 43-124 (148)
75 PRK06769 hypothetical protein; 98.7 2.2E-08 4.8E-13 81.2 6.0 77 138-215 27-119 (173)
76 PF06888 Put_Phosphatase: Puta 98.6 2.9E-07 6.4E-12 78.3 10.3 49 137-186 69-122 (234)
77 PRK08238 hypothetical protein; 98.5 1.7E-06 3.7E-11 80.9 13.4 45 139-187 72-119 (479)
78 TIGR01533 lipo_e_P4 5'-nucleot 98.5 7.2E-07 1.6E-11 77.4 9.6 67 137-204 116-190 (266)
79 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.5 5.4E-08 1.2E-12 83.8 2.5 76 139-215 120-205 (257)
80 PHA02530 pseT polynucleotide k 98.4 4E-07 8.7E-12 79.4 6.4 74 138-212 186-275 (300)
81 PRK05446 imidazole glycerol-ph 98.4 8.5E-07 1.8E-11 79.8 8.4 75 135-212 26-127 (354)
82 TIGR01668 YqeG_hyp_ppase HAD s 98.4 7.2E-07 1.6E-11 72.1 7.0 72 138-215 42-117 (170)
83 TIGR02726 phenyl_P_delta pheny 98.2 1.5E-06 3.2E-11 70.6 5.1 62 146-213 44-105 (169)
84 TIGR01452 PGP_euk phosphoglyco 98.2 7.5E-07 1.6E-11 77.4 3.2 74 139-214 143-227 (279)
85 PRK10530 pyridoxal phosphate ( 98.2 3.4E-06 7.4E-11 72.1 6.9 71 139-212 137-221 (272)
86 cd01427 HAD_like Haloacid deha 98.2 9E-06 1.9E-10 60.7 7.8 79 137-216 22-123 (139)
87 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.2 3.2E-06 7E-11 71.8 5.7 74 136-211 21-100 (242)
88 KOG3109 Haloacid dehalogenase- 98.1 6.1E-05 1.3E-09 63.2 12.5 74 138-212 99-184 (244)
89 PF12710 HAD: haloacid dehalog 98.1 2.4E-05 5.3E-10 63.0 10.0 68 142-213 92-182 (192)
90 TIGR01670 YrbI-phosphatas 3-de 98.1 6E-06 1.3E-10 65.7 5.3 64 144-213 36-99 (154)
91 TIGR02244 HAD-IG-Ncltidse HAD 98.0 7.9E-06 1.7E-10 73.2 5.4 55 135-190 180-245 (343)
92 PRK00192 mannosyl-3-phosphogly 98.0 1.7E-05 3.6E-10 68.6 6.8 36 150-186 35-70 (273)
93 KOG3120 Predicted haloacid deh 97.9 2.5E-05 5.5E-10 65.5 6.8 48 138-186 83-134 (256)
94 TIGR01684 viral_ppase viral ph 97.9 2.4E-05 5.2E-10 68.6 5.5 46 141-187 148-196 (301)
95 PRK09484 3-deoxy-D-manno-octul 97.7 7.4E-05 1.6E-09 61.0 6.0 59 148-212 60-118 (183)
96 PHA03398 viral phosphatase sup 97.7 7.2E-05 1.6E-09 65.6 5.6 46 141-187 150-198 (303)
97 PF06941 NT5C: 5' nucleotidase 97.7 9E-05 2E-09 60.8 5.8 54 134-187 68-131 (191)
98 PLN02645 phosphoglycolate phos 97.7 3.4E-05 7.4E-10 68.2 3.4 63 152-215 186-256 (311)
99 PF08645 PNK3P: Polynucleotide 97.6 7.1E-05 1.5E-09 60.0 4.7 69 140-211 30-123 (159)
100 TIGR02250 FCP1_euk FCP1-like p 97.6 6.1E-05 1.3E-09 60.3 4.0 77 136-216 55-137 (156)
101 TIGR01544 HAD-SF-IE haloacid d 97.6 0.0012 2.7E-08 57.6 11.9 74 137-211 119-216 (277)
102 PF12689 Acid_PPase: Acid Phos 97.6 0.00025 5.4E-09 57.6 7.0 74 137-212 43-130 (169)
103 PRK10513 sugar phosphate phosp 97.5 0.00029 6.2E-09 60.3 6.8 28 150-178 34-61 (270)
104 TIGR02251 HIF-SF_euk Dullard-l 97.3 0.00016 3.5E-09 58.1 2.8 79 138-218 41-124 (162)
105 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.3 7.2E-05 1.6E-09 63.6 0.4 72 140-213 139-220 (242)
106 COG4229 Predicted enolase-phos 97.2 0.0045 9.7E-08 50.8 10.4 90 126-219 91-190 (229)
107 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.1 0.00024 5.1E-09 60.9 2.1 77 138-216 120-205 (249)
108 KOG1615 Phosphoserine phosphat 97.1 0.028 6.1E-07 46.7 13.8 72 137-211 86-178 (227)
109 COG2179 Predicted hydrolase of 97.1 0.0019 4.2E-08 52.1 6.9 67 140-212 47-116 (175)
110 TIGR02463 MPGP_rel mannosyl-3- 97.1 0.0058 1.3E-07 50.7 9.8 64 150-215 136-204 (221)
111 PRK12702 mannosyl-3-phosphogly 97.0 0.0016 3.4E-08 57.4 5.9 29 150-179 32-60 (302)
112 PLN02177 glycerol-3-phosphate 96.9 0.013 2.8E-07 55.3 11.9 59 109-177 89-147 (497)
113 PRK01158 phosphoglycolate phos 96.9 0.00052 1.1E-08 57.2 2.3 56 154-212 117-179 (230)
114 PRK15126 thiamin pyrimidine py 96.9 0.00056 1.2E-08 58.8 2.3 31 1-31 1-31 (272)
115 TIGR01525 ATPase-IB_hvy heavy 96.9 0.0018 3.9E-08 61.6 5.9 69 135-211 380-452 (556)
116 PRK10976 putative hydrolase; P 96.8 0.00067 1.4E-08 58.0 2.2 31 1-31 1-31 (266)
117 TIGR01512 ATPase-IB2_Cd heavy 96.8 0.0021 4.5E-08 61.0 5.5 69 135-211 358-430 (536)
118 TIGR01675 plant-AP plant acid 96.8 0.0059 1.3E-07 51.9 7.5 42 137-179 118-165 (229)
119 PTZ00174 phosphomannomutase; P 96.7 0.00097 2.1E-08 56.9 2.0 29 3-31 6-34 (247)
120 COG4359 Uncharacterized conser 96.5 0.023 4.9E-07 46.8 8.9 38 137-175 71-111 (220)
121 TIGR01680 Veg_Stor_Prot vegeta 96.4 0.017 3.8E-07 50.2 8.0 47 137-184 143-195 (275)
122 TIGR01487 SPP-like sucrose-pho 96.3 0.0024 5.2E-08 52.9 2.4 59 153-212 108-169 (215)
123 COG4996 Predicted phosphatase 96.3 0.012 2.7E-07 45.8 6.1 75 137-212 39-122 (164)
124 COG0561 Cof Predicted hydrolas 96.3 0.0021 4.6E-08 54.9 2.1 31 1-31 2-32 (264)
125 COG0241 HisB Histidinol phosph 96.3 0.021 4.6E-07 46.9 7.8 71 138-211 30-127 (181)
126 PLN02645 phosphoglycolate phos 96.2 0.017 3.6E-07 51.1 7.5 74 112-187 18-97 (311)
127 PF03767 Acid_phosphat_B: HAD 96.2 0.0045 9.8E-08 52.5 3.7 45 138-183 114-164 (229)
128 TIGR02471 sucr_syn_bact_C sucr 96.2 0.022 4.7E-07 47.9 7.7 17 4-20 1-17 (236)
129 PLN02423 phosphomannomutase 96.1 0.0031 6.8E-08 53.9 2.0 29 3-31 8-36 (245)
130 TIGR01482 SPP-subfamily Sucros 96.1 0.0029 6.4E-08 52.4 1.6 56 154-212 109-171 (225)
131 TIGR01511 ATPase-IB1_Cu copper 96.0 0.021 4.5E-07 54.7 7.4 65 137-211 403-471 (562)
132 PLN02887 hydrolase family prot 95.5 0.0083 1.8E-07 57.6 2.5 31 1-31 307-337 (580)
133 PLN02499 glycerol-3-phosphate 95.3 0.19 4.1E-06 47.3 10.5 63 109-186 75-138 (498)
134 TIGR01681 HAD-SF-IIIC HAD-supe 95.3 0.022 4.7E-07 43.7 3.6 14 3-16 1-14 (128)
135 PRK03669 mannosyl-3-phosphogly 95.3 0.011 2.4E-07 50.9 2.2 30 2-31 7-36 (271)
136 PF08282 Hydrolase_3: haloacid 95.0 0.01 2.2E-07 49.0 1.3 27 5-31 1-27 (254)
137 PF13344 Hydrolase_6: Haloacid 95.0 0.04 8.6E-07 40.7 4.2 48 137-185 12-65 (101)
138 TIGR00099 Cof-subfamily Cof su 94.9 0.014 3E-07 49.6 1.8 23 190-212 188-210 (256)
139 TIGR01689 EcbF-BcbF capsule bi 94.8 0.017 3.6E-07 44.7 1.7 14 3-16 2-15 (126)
140 TIGR01484 HAD-SF-IIB HAD-super 94.7 0.016 3.4E-07 47.4 1.6 23 190-212 163-185 (204)
141 smart00775 LNS2 LNS2 domain. T 94.5 0.019 4.2E-07 45.8 1.7 14 4-17 1-14 (157)
142 PRK09484 3-deoxy-D-manno-octul 94.5 0.018 3.8E-07 47.0 1.4 15 2-16 21-35 (183)
143 TIGR01456 CECR5 HAD-superfamil 94.4 0.029 6.3E-07 49.8 2.5 27 4-31 2-28 (321)
144 TIGR01684 viral_ppase viral ph 94.2 0.031 6.7E-07 49.3 2.4 30 2-31 126-158 (301)
145 PRK10671 copA copper exporting 93.9 0.11 2.3E-06 52.0 5.9 67 137-211 648-717 (834)
146 TIGR01522 ATPase-IIA2_Ca golgi 93.9 0.12 2.6E-06 52.1 6.1 46 139-185 528-576 (884)
147 PHA03398 viral phosphatase sup 93.8 0.038 8.3E-07 48.7 2.2 30 2-31 128-160 (303)
148 cd01427 HAD_like Haloacid deha 93.7 0.026 5.5E-07 41.7 0.7 15 4-18 1-15 (139)
149 COG1778 Low specificity phosph 93.6 0.098 2.1E-06 42.0 4.0 61 146-212 45-105 (170)
150 TIGR02461 osmo_MPG_phos mannos 93.6 0.033 7.2E-07 46.9 1.4 23 190-212 181-205 (225)
151 PF03031 NIF: NLI interacting 93.5 0.03 6.4E-07 44.1 0.9 77 138-217 35-117 (159)
152 TIGR01664 DNA-3'-Pase DNA 3'-p 93.4 0.041 8.9E-07 44.3 1.6 16 2-17 13-28 (166)
153 TIGR01670 YrbI-phosphatas 3-de 93.4 0.035 7.6E-07 43.9 1.2 15 2-16 1-15 (154)
154 PRK10444 UMP phosphatase; Prov 93.3 0.062 1.3E-06 46.1 2.6 25 189-213 174-198 (248)
155 TIGR01486 HAD-SF-IIB-MPGP mann 93.0 0.051 1.1E-06 46.3 1.6 23 190-212 176-200 (256)
156 PRK14502 bifunctional mannosyl 92.8 0.068 1.5E-06 52.1 2.3 29 3-31 417-445 (694)
157 PRK10187 trehalose-6-phosphate 92.6 0.07 1.5E-06 46.1 2.0 14 3-16 15-28 (266)
158 TIGR01452 PGP_euk phosphoglyco 92.0 0.79 1.7E-05 39.6 7.8 49 137-186 16-70 (279)
159 TIGR00685 T6PP trehalose-phosp 91.4 0.097 2.1E-06 44.4 1.4 14 3-16 4-17 (244)
160 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.2 0.4 8.7E-06 40.9 5.0 48 138-186 16-69 (249)
161 TIGR02726 phenyl_P_delta pheny 90.9 0.12 2.6E-06 41.8 1.4 15 2-16 7-21 (169)
162 TIGR01485 SPP_plant-cyano sucr 90.6 0.27 5.8E-06 41.7 3.4 23 190-212 167-189 (249)
163 COG1778 Low specificity phosph 90.5 0.14 3E-06 41.2 1.4 17 1-17 7-23 (170)
164 PF12689 Acid_PPase: Acid Phos 90.5 0.15 3.2E-06 41.4 1.6 17 2-18 3-19 (169)
165 PTZ00445 p36-lilke protein; Pr 90.1 0.43 9.4E-06 40.2 4.1 79 140-219 76-191 (219)
166 smart00577 CPDc catalytic doma 90.0 0.18 3.9E-06 39.5 1.7 17 2-18 2-18 (148)
167 TIGR01460 HAD-SF-IIA Haloacid 89.6 0.14 3E-06 43.3 0.9 25 189-213 188-213 (236)
168 COG2503 Predicted secreted aci 89.3 0.59 1.3E-05 40.2 4.4 40 137-177 120-166 (274)
169 KOG2630 Enolase-phosphatase E- 89.3 1.4 3E-05 37.6 6.5 89 126-218 111-209 (254)
170 PF05761 5_nucleotid: 5' nucle 88.9 0.63 1.4E-05 43.5 4.7 49 141-189 185-244 (448)
171 PF13344 Hydrolase_6: Haloacid 88.8 0.22 4.8E-06 36.6 1.3 19 5-23 1-19 (101)
172 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.7 0.44 9.4E-06 40.9 3.3 46 139-185 21-72 (257)
173 TIGR02245 HAD_IIID1 HAD-superf 88.1 0.27 5.8E-06 40.8 1.5 16 2-17 21-36 (195)
174 PLN02151 trehalose-phosphatase 87.5 0.35 7.5E-06 43.8 1.9 29 3-31 99-132 (354)
175 PLN03017 trehalose-phosphatase 87.4 0.35 7.7E-06 43.9 2.0 29 3-31 112-145 (366)
176 PRK11033 zntA zinc/cadmium/mer 86.7 0.99 2.1E-05 44.8 4.8 58 137-199 566-626 (741)
177 TIGR00213 GmhB_yaeD D,D-heptos 86.5 0.36 7.8E-06 38.7 1.4 14 3-16 2-15 (176)
178 PLN02205 alpha,alpha-trehalose 86.4 0.67 1.5E-05 46.7 3.5 17 1-17 595-611 (854)
179 PF05116 S6PP: Sucrose-6F-phos 86.2 0.81 1.8E-05 39.0 3.5 28 2-29 2-29 (247)
180 PRK14501 putative bifunctional 86.0 0.66 1.4E-05 45.7 3.2 13 3-15 493-505 (726)
181 COG0647 NagD Predicted sugar p 85.8 0.77 1.7E-05 40.0 3.2 51 136-186 21-77 (269)
182 COG1877 OtsB Trehalose-6-phosp 85.6 0.41 8.9E-06 41.7 1.3 17 2-18 18-34 (266)
183 TIGR02463 MPGP_rel mannosyl-3- 85.2 2.1 4.5E-05 35.3 5.4 37 140-177 17-56 (221)
184 COG0647 NagD Predicted sugar p 84.4 0.57 1.2E-05 40.8 1.7 73 137-216 131-217 (269)
185 TIGR02461 osmo_MPG_phos mannos 84.2 2.3 4.9E-05 35.7 5.3 39 139-178 15-56 (225)
186 TIGR02251 HIF-SF_euk Dullard-l 84.0 0.62 1.4E-05 37.2 1.7 16 2-17 1-16 (162)
187 TIGR01261 hisB_Nterm histidino 83.8 0.57 1.2E-05 37.4 1.4 16 3-18 2-17 (161)
188 PF02358 Trehalose_PPase: Treh 83.5 0.87 1.9E-05 38.3 2.4 26 6-31 1-31 (235)
189 COG4996 Predicted phosphatase 82.5 0.69 1.5E-05 36.2 1.3 16 3-18 1-16 (164)
190 PLN02580 trehalose-phosphatase 82.4 0.7 1.5E-05 42.3 1.5 37 159-198 300-339 (384)
191 PRK10444 UMP phosphatase; Prov 82.2 1.5 3.3E-05 37.5 3.5 48 139-186 17-69 (248)
192 PF09419 PGP_phosphatase: Mito 79.7 2.4 5.2E-05 34.4 3.6 13 2-14 41-53 (168)
193 PF03031 NIF: NLI interacting 79.7 2.6 5.6E-05 32.9 3.8 16 3-18 1-16 (159)
194 COG3882 FkbH Predicted enzyme 78.7 3.6 7.9E-05 38.8 4.8 65 150-220 269-341 (574)
195 PRK06769 hypothetical protein; 78.2 1.3 2.9E-05 35.5 1.7 13 2-14 4-16 (173)
196 TIGR01460 HAD-SF-IIA Haloacid 77.8 4.9 0.00011 33.8 5.1 50 137-186 12-67 (236)
197 TIGR01487 SPP-like sucrose-pho 77.5 4.7 0.0001 33.1 4.9 40 139-179 18-60 (215)
198 KOG2134 Polynucleotide kinase 75.8 1.4 3.1E-05 40.2 1.3 19 3-21 76-94 (422)
199 TIGR02250 FCP1_euk FCP1-like p 75.7 1.7 3.6E-05 34.6 1.6 19 3-21 7-25 (156)
200 PRK01158 phosphoglycolate phos 75.7 6.1 0.00013 32.5 5.1 40 139-179 20-62 (230)
201 TIGR01668 YqeG_hyp_ppase HAD s 75.4 1.8 4E-05 34.6 1.8 15 2-16 25-39 (170)
202 COG3769 Predicted hydrolase (H 74.7 1.8 3.8E-05 37.0 1.5 15 1-15 6-20 (274)
203 PF08282 Hydrolase_3: haloacid 72.5 5.1 0.00011 32.7 3.9 38 139-177 15-55 (254)
204 PF09419 PGP_phosphatase: Mito 72.3 17 0.00037 29.4 6.7 68 137-211 57-141 (168)
205 TIGR00099 Cof-subfamily Cof su 71.6 7.8 0.00017 32.6 4.8 38 140-178 17-57 (256)
206 PRK05446 imidazole glycerol-ph 71.6 2.6 5.6E-05 38.2 2.0 17 1-17 1-17 (354)
207 PLN02382 probable sucrose-phos 71.5 2.2 4.7E-05 39.4 1.5 14 4-17 11-24 (413)
208 PRK10530 pyridoxal phosphate ( 71.4 9 0.00019 32.3 5.2 40 139-179 20-62 (272)
209 PRK15126 thiamin pyrimidine py 71.3 8.2 0.00018 32.9 5.0 40 139-179 19-61 (272)
210 COG4030 Uncharacterized protei 70.7 15 0.00033 31.6 6.2 86 100-203 59-151 (315)
211 PLN03063 alpha,alpha-trehalose 70.7 2.3 5E-05 42.6 1.6 16 3-18 508-523 (797)
212 PLN03064 alpha,alpha-trehalose 70.5 2.3 4.9E-05 43.3 1.5 14 3-16 592-605 (934)
213 COG0561 Cof Predicted hydrolas 70.1 9.3 0.0002 32.3 5.0 64 138-202 19-95 (264)
214 PF13242 Hydrolase_like: HAD-h 70.0 3.7 8E-05 28.0 2.1 25 189-213 4-28 (75)
215 TIGR01482 SPP-subfamily Sucros 69.1 11 0.00024 30.8 5.1 39 139-178 15-56 (225)
216 TIGR01686 FkbH FkbH-like domai 68.9 2.6 5.7E-05 37.2 1.4 16 2-17 3-18 (320)
217 TIGR01116 ATPase-IIA1_Ca sarco 68.4 7.7 0.00017 39.5 4.7 39 139-178 537-578 (917)
218 TIGR01486 HAD-SF-IIB-MPGP mann 68.1 12 0.00026 31.6 5.3 37 140-177 17-56 (256)
219 COG5663 Uncharacterized conser 67.7 16 0.00035 29.9 5.5 30 140-169 73-104 (194)
220 PRK10976 putative hydrolase; P 66.7 11 0.00023 31.9 4.7 40 139-179 19-61 (266)
221 PRK03669 mannosyl-3-phosphogly 66.0 14 0.00031 31.5 5.4 38 139-177 24-64 (271)
222 TIGR01485 SPP_plant-cyano sucr 65.6 13 0.00029 31.2 5.0 34 150-185 35-68 (249)
223 PF05152 DUF705: Protein of un 65.5 16 0.00034 32.3 5.4 47 140-187 143-192 (297)
224 COG4087 Soluble P-type ATPase 63.4 31 0.00068 27.1 6.2 70 135-211 26-98 (152)
225 PRK10517 magnesium-transportin 62.7 15 0.00033 37.4 5.6 71 139-217 550-624 (902)
226 TIGR01524 ATPase-IIIB_Mg magne 61.9 22 0.00048 36.0 6.5 47 139-187 515-564 (867)
227 PF08235 LNS2: LNS2 (Lipin/Ned 61.6 4.4 9.6E-05 32.5 1.3 13 4-16 1-13 (157)
228 smart00775 LNS2 LNS2 domain. T 61.3 26 0.00056 27.7 5.7 33 139-171 27-65 (157)
229 COG4502 5'(3')-deoxyribonucleo 59.4 3.7 8.1E-05 32.6 0.5 52 135-187 64-123 (180)
230 KOG2882 p-Nitrophenyl phosphat 59.4 11 0.00023 33.5 3.3 44 133-177 33-81 (306)
231 PTZ00445 p36-lilke protein; Pr 58.6 4.2 9.1E-05 34.3 0.7 14 2-15 43-56 (219)
232 cd04728 ThiG Thiazole synthase 57.4 1.3E+02 0.0028 26.0 9.7 91 111-203 74-175 (248)
233 TIGR01484 HAD-SF-IIB HAD-super 56.1 19 0.00041 29.0 4.2 33 140-172 18-53 (204)
234 TIGR01689 EcbF-BcbF capsule bi 55.5 36 0.00078 26.1 5.4 47 138-186 23-87 (126)
235 TIGR01497 kdpB K+-transporting 55.0 24 0.00053 34.8 5.3 57 139-200 446-506 (675)
236 PRK15122 magnesium-transportin 54.8 25 0.00055 35.8 5.6 71 139-217 550-624 (903)
237 KOG1605 TFIIF-interacting CTD 54.3 7.9 0.00017 33.7 1.7 17 2-18 89-105 (262)
238 PRK14010 potassium-transportin 54.3 29 0.00063 34.3 5.8 41 139-180 441-484 (673)
239 TIGR01517 ATPase-IIB_Ca plasma 54.0 35 0.00076 34.9 6.5 39 139-178 579-620 (941)
240 TIGR01106 ATPase-IIC_X-K sodiu 53.3 45 0.00097 34.4 7.2 38 139-177 568-608 (997)
241 TIGR01647 ATPase-IIIA_H plasma 51.5 31 0.00066 34.4 5.5 39 139-178 442-483 (755)
242 COG2179 Predicted hydrolase of 51.2 8.9 0.00019 31.2 1.4 13 2-14 28-40 (175)
243 KOG3189 Phosphomannomutase [Li 51.0 11 0.00025 31.6 2.1 29 3-31 12-40 (252)
244 PF06117 DUF957: Enterobacteri 50.4 25 0.00053 23.8 3.2 29 2-31 24-52 (65)
245 PF05152 DUF705: Protein of un 50.4 11 0.00024 33.3 1.9 17 2-18 122-138 (297)
246 COG5083 SMP2 Uncharacterized p 50.2 8.8 0.00019 35.9 1.4 15 2-16 375-389 (580)
247 KOG2470 Similar to IMP-GMP spe 49.7 12 0.00025 34.2 2.1 40 150-189 254-295 (510)
248 PHA02530 pseT polynucleotide k 49.5 11 0.00024 32.5 1.9 16 3-18 159-174 (300)
249 COG0474 MgtA Cation transport 49.2 52 0.0011 33.7 6.8 71 139-217 547-625 (917)
250 COG0241 HisB Histidinol phosph 49.0 9.2 0.0002 31.4 1.2 17 3-19 6-22 (181)
251 PRK01122 potassium-transportin 48.4 36 0.00078 33.6 5.4 40 139-179 445-487 (679)
252 TIGR02245 HAD_IIID1 HAD-superf 47.3 31 0.00067 28.6 4.1 35 142-177 48-84 (195)
253 PF08620 RPAP1_C: RPAP1-like, 47.1 6.8 0.00015 27.3 0.1 10 5-14 3-12 (73)
254 COG0731 Fe-S oxidoreductases [ 46.9 45 0.00098 29.5 5.3 70 137-213 90-179 (296)
255 PRK13762 tRNA-modifying enzyme 46.6 1.8E+02 0.0039 25.9 9.2 28 137-164 140-170 (322)
256 TIGR01456 CECR5 HAD-superfamil 46.0 22 0.00048 31.4 3.3 45 137-182 14-69 (321)
257 PRK00208 thiG thiazole synthas 45.4 2E+02 0.0044 24.8 9.7 91 111-203 74-175 (250)
258 PRK10076 pyruvate formate lyas 44.3 1.6E+02 0.0034 24.6 8.0 61 110-171 19-88 (213)
259 PF11019 DUF2608: Protein of u 44.2 1.1E+02 0.0024 26.2 7.2 76 142-217 84-189 (252)
260 PRK00192 mannosyl-3-phosphogly 43.9 40 0.00086 28.7 4.5 60 150-212 146-213 (273)
261 TIGR03278 methan_mark_10 putat 43.8 1.6E+02 0.0034 27.3 8.5 93 110-204 54-165 (404)
262 TIGR02244 HAD-IG-Ncltidse HAD 43.6 12 0.00026 33.8 1.2 17 2-18 12-28 (343)
263 PLN02887 hydrolase family prot 43.0 57 0.0012 31.6 5.8 38 139-177 325-365 (580)
264 PF05690 ThiG: Thiazole biosyn 42.2 1.5E+02 0.0032 25.6 7.5 91 111-205 74-177 (247)
265 PRK14502 bifunctional mannosyl 41.8 46 0.001 33.0 4.9 38 140-178 434-474 (694)
266 PRK11933 yebU rRNA (cytosine-C 40.0 97 0.0021 29.2 6.7 22 193-215 223-244 (470)
267 COG2217 ZntA Cation transport 38.8 58 0.0013 32.4 5.2 57 139-199 537-596 (713)
268 PF04028 DUF374: Domain of unk 38.6 1.3E+02 0.0029 20.8 6.4 54 152-211 11-64 (74)
269 PRK10187 trehalose-6-phosphate 38.3 40 0.00086 28.9 3.6 38 138-176 35-76 (266)
270 KOG0206 P-type ATPase [General 36.2 1.3E+02 0.0029 31.7 7.4 39 138-177 650-691 (1151)
271 cd01615 CIDE_N CIDE_N domain, 36.1 20 0.00044 25.3 1.1 15 4-18 42-56 (78)
272 KOG0202 Ca2+ transporting ATPa 35.8 1.6E+02 0.0034 30.2 7.5 42 139-181 584-628 (972)
273 PF06901 FrpC: RTX iron-regula 35.1 19 0.00041 30.1 1.0 19 3-21 59-77 (271)
274 smart00266 CAD Domains present 33.9 23 0.0005 24.8 1.1 15 4-18 40-54 (74)
275 KOG2832 TFIIF-interacting CTD 33.3 1.2E+02 0.0026 27.8 5.8 76 138-218 213-295 (393)
276 cd06537 CIDE_N_B CIDE_N domain 32.8 25 0.00053 25.1 1.2 15 4-18 41-55 (81)
277 COG3882 FkbH Predicted enzyme 32.7 24 0.00052 33.5 1.4 13 2-14 222-234 (574)
278 PF02017 CIDE-N: CIDE-N domain 32.5 24 0.00051 25.0 1.0 14 5-18 43-56 (78)
279 cd06536 CIDE_N_ICAD CIDE_N dom 32.2 25 0.00055 25.0 1.1 15 4-18 44-58 (80)
280 cd06539 CIDE_N_A CIDE_N domain 31.8 27 0.00058 24.7 1.2 15 4-18 42-56 (78)
281 COG2022 ThiG Uncharacterized e 31.4 3.5E+02 0.0075 23.4 9.3 93 111-205 81-184 (262)
282 KOG2882 p-Nitrophenyl phosphat 31.3 1.9E+02 0.0041 25.8 6.6 24 189-212 224-247 (306)
283 PF03387 Herpes_UL46: Herpesvi 31.3 4E+02 0.0087 25.0 9.0 100 9-128 16-116 (444)
284 smart00497 IENR1 Intron encode 30.5 36 0.00079 21.1 1.6 25 3-31 3-27 (53)
285 PF06189 5-nucleotidase: 5'-nu 30.0 23 0.0005 30.8 0.8 22 150-171 184-205 (264)
286 PF07453 NUMOD1: NUMOD1 domain 29.8 36 0.00079 19.8 1.4 26 2-31 1-26 (37)
287 KOG4549 Magnesium-dependent ph 29.5 1.2E+02 0.0026 23.7 4.5 40 137-177 42-85 (144)
288 PTZ00174 phosphomannomutase; P 28.9 98 0.0021 26.0 4.5 33 139-171 22-57 (247)
289 TIGR01523 ATPase-IID_K-Na pota 28.8 86 0.0019 32.7 4.7 38 139-177 646-686 (1053)
290 PF05822 UMPH-1: Pyrimidine 5' 28.4 2.2E+02 0.0048 24.5 6.5 67 96-177 61-130 (246)
291 TIGR01494 ATPase_P-type ATPase 28.3 98 0.0021 29.0 4.7 38 138-176 346-386 (499)
292 KOG2469 IMP-GMP specific 5'-nu 27.9 29 0.00063 32.1 1.0 13 2-14 27-39 (424)
293 COG2227 UbiG 2-polyprenyl-3-me 27.6 1E+02 0.0023 26.5 4.3 52 161-216 110-164 (243)
294 PRK11840 bifunctional sulfur c 27.4 4.6E+02 0.01 23.6 9.7 91 111-203 148-249 (326)
295 cd06538 CIDE_N_FSP27 CIDE_N do 26.8 36 0.00077 24.1 1.1 15 4-18 41-55 (79)
296 KOG1618 Predicted phosphatase 26.0 33 0.00071 31.0 1.0 27 4-31 37-63 (389)
297 KOG0207 Cation transport ATPas 24.7 2.1E+02 0.0046 29.4 6.4 58 139-201 723-784 (951)
298 CHL00162 thiG thiamin biosynth 24.0 4.9E+02 0.011 22.7 9.4 93 111-205 82-191 (267)
299 PLN02580 trehalose-phosphatase 23.9 1E+02 0.0022 28.3 3.9 35 137-171 139-175 (384)
300 COG2265 TrmA SAM-dependent met 23.7 1.9E+02 0.004 27.0 5.6 24 191-217 376-399 (432)
301 smart00099 btg1 tob/btg1 famil 23.7 3.2E+02 0.0069 20.5 7.4 59 110-177 22-80 (108)
302 PLN02151 trehalose-phosphatase 21.6 1.2E+02 0.0027 27.5 3.8 34 138-171 119-154 (354)
303 PF13720 Acetyltransf_11: Udp 21.6 1.1E+02 0.0023 21.6 2.8 23 105-127 23-45 (83)
304 COG4850 Uncharacterized conser 21.4 2.9E+02 0.0064 25.1 6.0 65 137-202 194-275 (373)
305 KOG3040 Predicted sugar phosph 21.3 2.4E+02 0.0051 24.1 5.2 61 140-206 24-90 (262)
306 COG2442 Uncharacterized conser 21.2 2.9E+02 0.0064 19.4 5.0 29 87-125 43-71 (79)
307 TIGR01652 ATPase-Plipid phosph 20.1 1.3E+02 0.0029 31.2 4.2 39 138-177 630-671 (1057)
No 1
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.95 E-value=5.1e-27 Score=197.23 Aligned_cols=159 Identities=26% Similarity=0.310 Sum_probs=126.7
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|+++|+|||||||+||.+.+..++|.+++++| +++. ....++.+||.|.+..+. +.+...
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~~ig~~~~~~~~-~~~~~~------ 62 (220)
T COG0546 3 MIKAILFDLDGTLVDSAEDILRAFNAALAELG------LPPL-------DEEEIRQLIGLGLDELIE-RLLGEA------ 62 (220)
T ss_pred CCCEEEEeCCCccccChHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhcCCHHHHHH-HHhccc------
Confidence 46899999999999999999999999999994 4432 246899999999877552 322110
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
.. +...+.++.|+++|.+.|.+.. .+.+||||.++|+ ++|++++|
T Consensus 63 --------~~----------------------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i 110 (220)
T COG0546 63 --------DE----------------------EAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGI 110 (220)
T ss_pred --------cc----------------------hhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEE
Confidence 00 0011345566666666655544 4789999999999 89999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEec
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
+|||++..++.+|++ +|+..+|+.++|.+ .||+|+++..++++++.++++++|=
T Consensus 111 ~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~V 168 (220)
T COG0546 111 VTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMV 168 (220)
T ss_pred EeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEE
Confidence 999999999999995 99999999999954 4599999999999999998888884
No 2
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=6.9e-24 Score=179.03 Aligned_cols=158 Identities=20% Similarity=0.167 Sum_probs=121.8
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|.++|||||||||+||.+.+..+++.+++++ |++... .+.++..+|.|.+..+. ..+..
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~------g~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~------- 69 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAAR------GRAPIT-------LAQLRPVVSKGARAMLA-VAFPE------- 69 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHC------CCCCCC-------HHHHHHHhhhHHHHHHH-HHhcc-------
Confidence 7899999999999999999999999999999 444221 35677788888665431 11100
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
.+.+...+....|++.|.+.+ ....++|||+.++|+ ++|++++|
T Consensus 70 -----------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~g~~l~i 116 (229)
T PRK13226 70 -----------------------------LDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECAGCVWGI 116 (229)
T ss_pred -----------------------------CChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHCCCeEEE
Confidence 112222334455566665432 234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
+||++...+..++++ +|+..+|+.++|++ .||+|+++.++++++|.++++++|=-
T Consensus 117 ~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IG 175 (229)
T PRK13226 117 VTNKPEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVG 175 (229)
T ss_pred ECCCCHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeC
Confidence 999999999999995 99999999998875 35999999999999999999998854
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.90 E-value=7.6e-23 Score=170.30 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=115.5
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|.++|+|||||||+||.+.+..+.+.++++++ .+..+ .++++...|......+
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~------~~~~~-------~~~~~~~~G~~~~~~~-------------- 54 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYY------PNQYK-------REDVLPFIGPSLHDTF-------------- 54 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhC------CCCCC-------HHHHHHHhCcCHHHHH--------------
Confidence 36999999999999999999999999999994 22111 1345555565432211
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
.. +.++...+....|+..|.+. .....++|||+.++|+ ++|++++|
T Consensus 55 --------------~~-------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~L~~~g~~~~i 103 (214)
T PRK13288 55 --------------SK-------------IDESKVEEMITTYREFNHEH----HDELVTEYETVYETLKTLKKQGYKLGI 103 (214)
T ss_pred --------------Hh-------------cCHHHHHHHHHHHHHHHHHh----hhhhcccCcCHHHHHHHHHHCCCeEEE
Confidence 00 11222233444555554432 2235689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
+||+++..+..+|+. +|+..+|+.++|++ .||+|+++.+++++++.++++++|=.
T Consensus 104 ~S~~~~~~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iG 162 (214)
T PRK13288 104 VTTKMRDTVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVG 162 (214)
T ss_pred EeCCCHHHHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEEC
Confidence 999999999999995 99999999999976 35999999999999999999998743
No 4
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.89 E-value=1.6e-22 Score=174.36 Aligned_cols=157 Identities=14% Similarity=0.078 Sum_probs=114.7
Q ss_pred CceEEEecCcccccChHHHHH-HHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 2 EDLYALDFDGVICDSCEETAL-SAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~-s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
+++|||||||||+||.+.++. +.+.+++++| ++... .+.++.++|.+....+. ..+..
T Consensus 24 ~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G------~~~~~-------~e~~~~~~G~~~~~~~~-~l~~~------- 82 (260)
T PLN03243 24 WLGVVLEWEGVIVEDDSELERKAWRALAEEEG------KRPPP-------AFLLKRAEGMKNEQAIS-EVLCW------- 82 (260)
T ss_pred ceEEEEeCCCceeCCchHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHHH-HHhcc-------
Confidence 489999999999999877764 8888999994 43211 23556788877655331 22110
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
+.+.+...+....++..|... . ....++|||+.++|+ ++|++++|
T Consensus 83 ----------------------------~~~~~~~~~l~~~~~~~~~~~-~---~~~~~l~pg~~e~L~~L~~~g~~l~I 130 (260)
T PLN03243 83 ----------------------------SRDFLQMKRLAIRKEDLYEYM-Q---GGLYRLRPGSREFVQALKKHEIPIAV 130 (260)
T ss_pred ----------------------------CCCHHHHHHHHHHHHHHHHHH-H---ccCcccCCCHHHHHHHHHHCCCEEEE
Confidence 011122223333344444221 1 124679999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEec
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
+||++...++.+|++ +|+..+|+.|++++ .||+|++++.++++++.++++++|=
T Consensus 131 ~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~I 188 (260)
T PLN03243 131 ASTRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVF 188 (260)
T ss_pred EeCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEE
Confidence 999999999999995 99999999999886 3599999999999999999999874
No 5
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.89 E-value=2.9e-22 Score=167.19 Aligned_cols=159 Identities=13% Similarity=0.093 Sum_probs=119.2
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhccccc-ccccchhHHHHHHHHHhccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRP-VVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~-~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
+++|+|||||||+||.+.+..+.+.+++++| .+..+ +++.. +.|.+....+ .+.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~~~--------~~~~~~~~g~~~~~~~-~~~~--------- 56 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAG------LSPTP--------EEVQSAWMGQSKIEAI-RALL--------- 56 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcC------CCCCH--------HHHHHhhcCCCHHHHH-HHHH---------
Confidence 4799999999999999999999999999984 43211 22223 6776654432 1111
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
+.+|.+.+...+....|++.|.+.|.. ...++|||+.++|+ ++|++++|
T Consensus 57 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~G~~~~L~~L~~~g~~~~i 108 (220)
T TIGR03351 57 -------------------------ALDGADEAEAQAAFADFEERLAEAYDD---GPPVALPGAEEAFRSLRSSGIKVAL 108 (220)
T ss_pred -------------------------hccCCCHHHHHHHHHHHHHHHHHHhcc---cCCccCCCHHHHHHHHHHCCCEEEE
Confidence 112333344445556666666544322 24589999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCC--CCCceEecCC----CCCcHHHHHHHHhhCCCC-CCceEecc
Q 027701 158 VTSNQSRFVETLLRELAGVT--ITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLQRST 213 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~--~~f~~v~G~~----~~pkp~~l~~~l~~~~~~-~~~~~~~~ 213 (220)
+||+++..++.+|++ +|+. .+|+.+++++ .||+|+++..++++++.+ +++++|-.
T Consensus 109 vT~~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~ig 170 (220)
T TIGR03351 109 TTGFDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAG 170 (220)
T ss_pred EeCCchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeC
Confidence 999999999999995 9998 9999999985 249999999999999997 68888754
No 6
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.89 E-value=3.6e-22 Score=170.63 Aligned_cols=161 Identities=11% Similarity=0.028 Sum_probs=115.3
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|.++|||||||||+||.+.+..+++.+++++|.. .|.+. . .....+.++|.+.+..+. ..+..
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~--~g~~~-~------~~~~~~~~~G~~~~~~~~-~~~~~------- 83 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFN--GGVPI-T------EEFFVENIAGKHNEDIAL-GLFPD------- 83 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccc--cCCCC-C------HHHHHHHcCCCCHHHHHH-HHcCc-------
Confidence 3589999999999999999999999999999421 01221 1 011245667776654331 11100
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
. . +...+....++.+|.+.+ .....+|||+.++|+ ++|++++|
T Consensus 84 ------~--~----------------------~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~g~~l~I 129 (248)
T PLN02770 84 ------D--L----------------------ERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDRGLKRAA 129 (248)
T ss_pred ------c--h----------------------hhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHcCCeEEE
Confidence 0 0 001112223344443321 234689999999999 88999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
+||++...++..|++ +|+..+|+.|++++ .||+|+++++++++++.++++++|--
T Consensus 130 ~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vg 188 (248)
T PLN02770 130 VTNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFE 188 (248)
T ss_pred EeCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEc
Confidence 999999999999995 99999999998876 35999999999999999999998853
No 7
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.88 E-value=5.2e-22 Score=164.36 Aligned_cols=159 Identities=18% Similarity=0.201 Sum_probs=117.4
Q ss_pred EEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccccccc
Q 027701 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (220)
Q Consensus 5 viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~~~~ 84 (220)
|||||||||+||.+.+..+++.+++++| .++.+ .+.++.++|.+....+. ..+...
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~g~~~~~~~~-~~~~~~---------- 56 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALG------LPPAT-------LARVIGFIGNGVPVLME-RVLAWA---------- 56 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhcccHHHHHH-HHhhcc----------
Confidence 6999999999999999999999999994 43211 24556667777543321 111100
Q ss_pred ccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCC
Q 027701 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (220)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~TnK 161 (220)
+. ..+.+...+....|.++|.+. .....++|||+.++|+ ++|++++|+||+
T Consensus 57 --~~--------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~ 110 (213)
T TIGR01449 57 --GQ--------------------EPDAQRVAELRKLFDRHYEEV----AGELTSVFPGVEATLGALRAKGLRLGLVTNK 110 (213)
T ss_pred --cc--------------------ccChHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 00 112233334445555555443 2335689999999999 789999999999
Q ss_pred chHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccC
Q 027701 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTC 214 (220)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~ 214 (220)
+...++.++++ +|+..+|+.++|++ .||+|+++.+++++++.++++++|-.-
T Consensus 111 ~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igD 166 (213)
T TIGR01449 111 PTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGD 166 (213)
T ss_pred CHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCC
Confidence 99999999995 99999999999976 359999999999999999999988543
No 8
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.87 E-value=1.3e-21 Score=169.54 Aligned_cols=164 Identities=20% Similarity=0.214 Sum_probs=124.4
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|+++|+|||||||+||.+.+..+.+.+++++| .+.. ..+.++.++|.|...+. ...+..
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g------~~~~-------~~~~~~~~~g~~~~~~~-~~~l~~------- 70 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLELG------RPPA-------GLEAVRHWVGNGAPVLV-RRALAG------- 70 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHcC------CCCC-------CHHHHHHHhChhHHHHH-HHHhcc-------
Confidence 67999999999999999999999999999994 4321 12456778888865433 122210
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
. ...++.+++..++....|++.|.+. .....+|||+.++|+ ++|++++|
T Consensus 71 ------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~g~~l~i 122 (272)
T PRK13223 71 ------S-----------------IDHDGVDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQGVEMAL 122 (272)
T ss_pred ------c-----------------ccccCCCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHCCCeEEE
Confidence 0 0011334444555566666666542 124689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccC
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTC 214 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~ 214 (220)
+||++...++.++++ +|+..+|+.+++++ .||+|++++.+++++|.++++++|=.-
T Consensus 123 vTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD 182 (272)
T PRK13223 123 ITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGD 182 (272)
T ss_pred EECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECC
Confidence 999999999999995 99999999999876 359999999999999999999988543
No 9
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.87 E-value=1.7e-21 Score=175.46 Aligned_cols=156 Identities=12% Similarity=0.085 Sum_probs=115.8
Q ss_pred ceEEEecCcccccChHHHHH-HHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 3 DLYALDFDGVICDSCEETAL-SAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~-s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
++|||||||||+||.+.++. +.+.+++++| .+... .+.++.++|.+.+..+. ..+..
T Consensus 132 ~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G------~~~~~-------~e~~~~~~G~~~~~~l~-~ll~~-------- 189 (381)
T PLN02575 132 LGAIFEWEGVIIEDNPDLENQAWLTLAQEEG------KSPPP-------AFILRRVEGMKNEQAIS-EVLCW-------- 189 (381)
T ss_pred CEEEEcCcCcceeCHHHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHHH-HHhhc--------
Confidence 78999999999999998887 5555667774 43211 23467788877654331 11100
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~ 158 (220)
..+++..++....+++.|.+.. .....+|||+.++|+ ++|++++|+
T Consensus 190 ---------------------------~~~~~~~e~l~~~~~~~y~~~~----~~~~~l~pGa~ElL~~Lk~~GiklaIa 238 (381)
T PLN02575 190 ---------------------------SRDPAELRRMATRKEEIYQALQ----GGIYRLRTGSQEFVNVLMNYKIPMALV 238 (381)
T ss_pred ---------------------------cCCHHHHHHHHHHHHHHHHHHh----ccCCCcCcCHHHHHHHHHHCCCeEEEE
Confidence 0122333344455566555432 234689999999999 889999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEecCCC----CCcHHHHHHHHhhCCCCCCceEec
Q 027701 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT----GPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
||++...++.+|++ +|+..||+.|+|++. ||+|++++.++++++.++++++|=
T Consensus 239 Sn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 239 STRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred eCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 99999999999995 999999999999863 599999999999999999999874
No 10
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.87 E-value=1.4e-21 Score=169.57 Aligned_cols=154 Identities=21% Similarity=0.154 Sum_probs=116.1
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
.++|+|||||||+||.+.+..+++.+++++| ++..+ .+.++.++|...+.++
T Consensus 62 ~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G------~~~~~-------~~~~~~~~g~~~~~i~--------------- 113 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLPTVVAIANAHAPDFG------YDPID-------ERDYAQLRQWSSRTIV--------------- 113 (273)
T ss_pred cCEEEECCcCccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhCccHHHHH---------------
Confidence 4789999999999999999999999999994 43221 1334555554432211
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~ 158 (220)
+.++.++++..+....|+++|... ....++||||.++|+ ++|++++|+
T Consensus 114 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~pg~~e~L~~L~~~gi~laIv 164 (273)
T PRK13225 114 ------------------------RRAGLSPWQQARLLQRVQRQLGDC-----LPALQLFPGVADLLAQLRSRSLCLGIL 164 (273)
T ss_pred ------------------------HHcCCCHHHHHHHHHHHHHHHHhh-----cccCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 111233333444455566655332 345689999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCceEecc
Q 027701 159 TSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
||+++..++.+|++ +|+..+|+.|++++. .+||+++.+++++++.++++++|=-
T Consensus 165 Sn~~~~~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 165 SSNSRQNIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred eCCCHHHHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 99999999999995 999999999988764 4889999999999999999988743
No 11
>PRK11587 putative phosphatase; Provisional
Probab=99.87 E-value=2.1e-21 Score=162.41 Aligned_cols=153 Identities=15% Similarity=0.093 Sum_probs=107.6
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
+++|||||||||+||.+.+..+++.+++++ |++.. +..+.+.|.+....+ +.+..
T Consensus 3 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~------g~~~~---------~~~~~~~g~~~~~~~--~~~~~-------- 57 (218)
T PRK11587 3 CKGFLFDLDGTLVDSLPAVERAWSNWADRH------GIAPD---------EVLNFIHGKQAITSL--RHFMA-------- 57 (218)
T ss_pred CCEEEEcCCCCcCcCHHHHHHHHHHHHHHc------CCCHH---------HHHHHHcCCCHHHHH--HHHhc--------
Confidence 489999999999999999999999999999 45421 122334566554322 11110
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~ 158 (220)
+.+.+.+.+.+..++ .|... .....++|||+.++|+ ++|++++|+
T Consensus 58 ---------------------------~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~pg~~e~L~~L~~~g~~~~iv 105 (218)
T PRK11587 58 ---------------------------GASEAEIQAEFTRLE-QIEAT----DTEGITALPGAIALLNHLNKLGIPWAIV 105 (218)
T ss_pred ---------------------------cCCcHHHHHHHHHHH-HHHHh----hhcCceeCcCHHHHHHHHHHcCCcEEEE
Confidence 011122222222111 12111 1235689999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
||++...+...++. +|+. +|+.+++++ .||+|+++..+++++|.++++++|=-
T Consensus 106 Tn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ig 162 (218)
T PRK11587 106 TSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVE 162 (218)
T ss_pred cCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEe
Confidence 99999999889995 8885 567777764 36999999999999999999998853
No 12
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.87 E-value=3.8e-21 Score=164.18 Aligned_cols=168 Identities=11% Similarity=0.023 Sum_probs=119.3
Q ss_pred CceEEEecCcccccChH-HHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 2 EDLYALDFDGVICDSCE-ETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~-~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
.++|||||||||+||.. .+..+++.+++++| .+. + .++++..+|.+....+. ..+ .
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g------~~~-~-------~~~~~~~~G~~~~~~~~-~~~-~------- 58 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFG------VQI-T-------LEEARGPMGLGKWDHIR-ALL-K------- 58 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcC------CCc-c-------HHHHHHhcCccHHHHHH-HHh-c-------
Confidence 37899999999999964 35788999999984 431 1 23456667776544331 111 0
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhc--CCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l 155 (220)
..... ..+.+.+| .+++...+....|++.|.+.+ ....++|||+.++|+ ++|+++
T Consensus 59 ---------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~e~L~~L~~~g~~l 118 (253)
T TIGR01422 59 ---------MPAVA-------ERWRAKFGRLPTEADIEAIYEAFEPLQLAKL----AEYSSPIPGVIEVIAYLRARGIKI 118 (253)
T ss_pred ---------CHHHH-------HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----HhcCccCCCHHHHHHHHHHCCCeE
Confidence 00111 12223333 245555566666766654432 235789999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCC-ceEecCC----CCCcHHHHHHHHhhCCCC-CCceEecc
Q 027701 156 YIVTSNQSRFVETLLRELAGVTITP-DRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLQRST 213 (220)
Q Consensus 156 ~I~TnK~~~~a~~iL~~~~gl~~~f-~~v~G~~----~~pkp~~l~~~l~~~~~~-~~~~~~~~ 213 (220)
+|+||+++..++.+|++ +|+..+| +.|+|++ .||+|+++.+++++++.. +++++|=-
T Consensus 119 ~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IG 181 (253)
T TIGR01422 119 GSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACVKVG 181 (253)
T ss_pred EEECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheEEEC
Confidence 99999999999999995 9999885 8998876 359999999999999995 88888743
No 13
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.87 E-value=6.2e-21 Score=164.39 Aligned_cols=168 Identities=13% Similarity=0.052 Sum_probs=116.9
Q ss_pred CceEEEecCcccccChHH-HHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 2 EDLYALDFDGVICDSCEE-TALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~-i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
.++|||||||||+||... +..+++.+++++| ++. . .++++..+|.+....+ +.+..
T Consensus 4 ~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g------~~~-~-------~~~~~~~~G~~~~~~~--~~~~~------- 60 (267)
T PRK13478 4 IQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFG------VEI-T-------LEEARGPMGLGKWDHI--RALLK------- 60 (267)
T ss_pred eEEEEEcCCCCeecCCCccHHHHHHHHHHHcC------CCC-C-------HHHHHHhcCCCHHHHH--HHHHh-------
Confidence 489999999999999654 3688999999984 431 1 2345666776643322 11100
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcC--CHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l 155 (220)
.. .+...+...+|. +.++..+....|+++|.+.+ .....+|||+.++|+ ++|+++
T Consensus 61 ---------~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~elL~~L~~~g~~l 120 (267)
T PRK13478 61 ---------MP-------RVAARWQAVFGRLPTEADVDALYAAFEPLQIAKL----ADYATPIPGVLEVIAALRARGIKI 120 (267)
T ss_pred ---------cH-------HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----hhcCCCCCCHHHHHHHHHHCCCEE
Confidence 00 011122223332 34445555566666655432 335689999999999 789999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCC-CceEecCC----CCCcHHHHHHHHhhCCCC-CCceEecc
Q 027701 156 YIVTSNQSRFVETLLRELAGVTIT-PDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRLQRST 213 (220)
Q Consensus 156 ~I~TnK~~~~a~~iL~~~~gl~~~-f~~v~G~~----~~pkp~~l~~~l~~~~~~-~~~~~~~~ 213 (220)
+|+||+++..+..+|+. +|+..+ |+.|+|++ .||+|+++.+++++++.. +++++|=-
T Consensus 121 ~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IG 183 (267)
T PRK13478 121 GSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVD 183 (267)
T ss_pred EEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceEEEc
Confidence 99999999999999995 998876 48888875 359999999999999996 68888743
No 14
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.85 E-value=1.2e-20 Score=155.99 Aligned_cols=148 Identities=18% Similarity=0.226 Sum_probs=109.5
Q ss_pred EEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccccccc
Q 027701 5 YALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSV 84 (220)
Q Consensus 5 viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~~~~ 84 (220)
|+|||||||+||.+.+..+++.+++++. |.+.. +.+.++.++|.+++..+. .+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~g~~~~~~~~--~~------------- 53 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVV-----GDGPA-------PFEEYRRHLGRYFPDIMR--IM------------- 53 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhc-----CCCCC-------CHHHHHHHhCccHHHHHH--Hc-------------
Confidence 6999999999999999999999999862 22211 134667777776654331 11
Q ss_pred ccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCC
Q 027701 85 AEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSN 161 (220)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~TnK 161 (220)
|.+.+..... ++..|. .....++|||+.++|+ ++|++++|+||+
T Consensus 54 ------------------------~~~~~~~~~~---~~~~~~------~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~ 100 (205)
T TIGR01454 54 ------------------------GLPLEMEEPF---VRESYR------LAGEVEVFPGVPELLAELRADGVGTAIATGK 100 (205)
T ss_pred ------------------------CCCHHHHHHH---HHHHHH------hhcccccCCCHHHHHHHHHHCCCeEEEEeCC
Confidence 1111000001 112221 1235789999999999 789999999999
Q ss_pred chHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 162 QSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 162 ~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
+...++..+++ +|+..+|+.++|++ .||+|+++++++++++.++++++|=-
T Consensus 101 ~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ig 155 (205)
T TIGR01454 101 SGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVG 155 (205)
T ss_pred chHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEc
Confidence 99999999995 99999999999875 35999999999999999999998854
No 15
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.85 E-value=1.8e-20 Score=156.90 Aligned_cols=163 Identities=17% Similarity=0.098 Sum_probs=115.3
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|.++|+|||||||+||-+.+..+.+.+++++| .+... ..+++..+|...+..+ +.+.+
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~--~~~~~------- 63 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLG------VDISR-------REELPDTLGLRIDQVV--DLWYA------- 63 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCC------CCCCH-------HHHHHHhhCCCHHHHH--HHHHH-------
Confidence 46899999999999999999999999999994 33211 1244555565543322 11110
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
..++......+....+++.+.+. ......+|||+.++|+ ++|++++|
T Consensus 64 --------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i 113 (222)
T PRK10826 64 --------------------------RQPWNGPSRQEVVQRIIARVISL----IEETRPLLPGVREALALCKAQGLKIGL 113 (222)
T ss_pred --------------------------hcCCCCCCHHHHHHHHHHHHHHH----HhcCCCCCCCHHHHHHHHHHCCCeEEE
Confidence 00000001112223333333322 1234689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccCCC
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTCNP 216 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~~~ 216 (220)
+||+....++.++++ +|+..+|+.+++++ .||+|++++.+++++|.++++++|-.-++
T Consensus 114 ~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~ 175 (222)
T PRK10826 114 ASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSF 175 (222)
T ss_pred EeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCh
Confidence 999999999999995 99999999999875 35999999999999999999999865443
No 16
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.85 E-value=2.8e-20 Score=150.63 Aligned_cols=156 Identities=14% Similarity=0.101 Sum_probs=113.2
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
+++|+|||||||+||.+....+.+.+++++| ++. . .+....+.|.+....+ ...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g------~~~-~-------~~~~~~~~g~~~~~~~-~~~~---------- 55 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYG------IEF-D-------KQYNTSLGGLSREDIL-RAIL---------- 55 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcC------CCC-C-------HHHHHHcCCCCHHHHH-HHHH----------
Confidence 4789999999999999999999999999984 331 1 1223344554433222 1111
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhh--cCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIY 156 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~ 156 (220)
..+ +++++++.+....+.++|.+... .....+|||+.++|+ ++|++++
T Consensus 56 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~ 108 (185)
T TIGR02009 56 ------------------------KLRKPGLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVG 108 (185)
T ss_pred ------------------------HhcCCCCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEE
Confidence 111 24445555555555555543221 124689999999999 7899999
Q ss_pred EEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEec
Q 027701 157 IVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 157 I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
|+||+ ..++.+|++ +|+..+|+.++|++ .||+|+++.+++++++.++++++|=
T Consensus 109 i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~I 165 (185)
T TIGR02009 109 LGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVF 165 (185)
T ss_pred EEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 99999 668999995 99999999999875 3599999999999999999999884
No 17
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.84 E-value=4.1e-20 Score=150.33 Aligned_cols=152 Identities=13% Similarity=0.045 Sum_probs=107.2
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccccc
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~~ 82 (220)
++|+|||||||+||.+.+..+.+.+++++| .+. + ...++.+.|......+ +.+..
T Consensus 6 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~-~-------~~~~~~~~g~~~~~~~--~~~~~--------- 60 (188)
T PRK10725 6 AGLIFDMDGTILDTEPTHRKAWREVLGRYG------LQF-D-------EQAMVALNGSPTWRIA--QAIIE--------- 60 (188)
T ss_pred eEEEEcCCCcCccCHHHHHHHHHHHHHHcC------CCC-C-------HHHHHHhcCCCHHHHH--HHHHH---------
Confidence 799999999999999999999999999994 331 1 1244555665433222 11111
Q ss_pred ccccCcchHHHhhhhhhhhHHHHHhhc--CCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH--hCCCcEEEE
Q 027701 83 SVAEGLTVEGILENWLKIKPVIMEEWS--ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIV 158 (220)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~--~~g~~l~I~ 158 (220)
.++ .+.+.+.+. +..+|.+.+ .....+|||+ ++|+ .++++++|+
T Consensus 61 ------------------------~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~-e~L~~L~~~~~l~I~ 108 (188)
T PRK10725 61 ------------------------LNQADLDPHALARE---KTEAVKSML----LDSVEPLPLI-EVVKAWHGRRPMAVG 108 (188)
T ss_pred ------------------------HhCCCCCHHHHHHH---HHHHHHHHH----hccCCCccHH-HHHHHHHhCCCEEEE
Confidence 111 112222221 222222211 2245789975 7777 566999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEec
Q 027701 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
||+++..++..|++ +|+..+|+.|++++ .||+|+++..++++++.++++++|=
T Consensus 109 T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 165 (188)
T PRK10725 109 TGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVF 165 (188)
T ss_pred cCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 99999999999995 99999999999986 3599999999999999999998884
No 18
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.84 E-value=3.2e-20 Score=150.27 Aligned_cols=161 Identities=17% Similarity=0.149 Sum_probs=113.0
Q ss_pred eEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccccc
Q 027701 4 LYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSS 83 (220)
Q Consensus 4 ~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~~~ 83 (220)
+|+|||||||+||.+.+..+++.+++++ |++. . .+..+.+.|.+....+ .+.+...
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~------g~~~-~-------~~~~~~~~g~~~~~~~-~~~~~~~--------- 56 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADEL------GIPF-D-------EEFNESLKGVSREDSL-ERILDLG--------- 56 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHc------CCCC-C-------HHHHHHhcCCChHHHH-HHHHHhc---------
Confidence 5899999999999999999999999999 4442 1 1233455555443322 1221110
Q ss_pred cccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEEcC
Q 027701 84 VAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTS 160 (220)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~Tn 160 (220)
+. .++++...+..+.+.++|.+.+.. .....+||||.++|+ ++|++++|+||
T Consensus 57 ---~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pg~~~~L~~L~~~g~~~~i~s~ 111 (185)
T TIGR01990 57 ---GK--------------------KYSEEEKEELAERKNDYYVELLKE--LTPADVLPGIKNLLDDLKKNNIKIALASA 111 (185)
T ss_pred ---CC--------------------CCCHHHHHHHHHHHHHHHHHHHHh--cCCcccCccHHHHHHHHHHCCCeEEEEeC
Confidence 00 123344444455555555443221 123589999999999 78999999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccCCC
Q 027701 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTCNP 216 (220)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~~~ 216 (220)
+.. ...+|++ +|+..+|+.+++++ .||+|+++.+++++++.++++++|=.-++
T Consensus 112 ~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~ 168 (185)
T TIGR01990 112 SKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQ 168 (185)
T ss_pred Ccc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCH
Confidence 754 4678995 99999999998875 35999999999999999999999865544
No 19
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.84 E-value=2.1e-20 Score=153.92 Aligned_cols=167 Identities=14% Similarity=0.072 Sum_probs=112.1
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhH-------HHHHHHHHhcc
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDT-------LLLVRLLLEMR 75 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~-------~~~~~~l~~~~ 75 (220)
++|+|||||||+||.+.+..+++.+++++| ..... .++++.++|.|... ..+.+.+...
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 66 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFG------GVSVT-------HADIDHTKLAGNANNDWQLTHRLVVDGLNSA- 66 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHc------CCCCC-------HHHHHHHHHccCccCchHHHHHHHHHhhhcc-
Confidence 479999999999999999999999999994 22111 24567778765320 0111111100
Q ss_pred cccccccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhc--cccc---cccCCCCCccHHHHHH-
Q 027701 76 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDT--DFTT---WIGANRLYPGVSDALK- 149 (220)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~--y~~~---~~~~~~lypGv~elL~- 149 (220)
. . .. ..+.....+....|++.|... |... ......+.+++.++|+
T Consensus 67 -----------~--~---------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 117 (197)
T TIGR01548 67 -----------S--S---------------ER-VRDAPTLEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRE 117 (197)
T ss_pred -----------c--c---------------hh-ccCCccHHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHH
Confidence 0 0 00 000111223334455555431 1000 0012345566699999
Q ss_pred --hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCC---CCcHHHHHHHHhhCCCCCCceEecc
Q 027701 150 --LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 150 --~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~---~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
++|++++|+||+++..++.+|++ +|+..+|+.+++++. ||+|+++.+++++++.++++++|=-
T Consensus 118 l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 118 LHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred HHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence 78999999999999999999995 999999999998763 6999999999999999999988743
No 20
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.84 E-value=1.3e-19 Score=151.03 Aligned_cols=163 Identities=25% Similarity=0.262 Sum_probs=122.5
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
.++|+|||||||+||.+....+.+.++++++ .+..+ .+.++.++|.|...++ .+.+...
T Consensus 6 ~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~g~~~~~~~-~~~~~~~------- 64 (226)
T PRK13222 6 IRAVAFDLDGTLVDSAPDLAAAVNAALAALG------LPPAG-------EERVRTWVGNGADVLV-ERALTWA------- 64 (226)
T ss_pred CcEEEEcCCcccccCHHHHHHHHHHHHHHCC------CCCCC-------HHHHHHHhCccHHHHH-HHHHhhc-------
Confidence 5899999999999999999999999999984 33211 2456677887765433 1222110
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~ 158 (220)
+ ...+.++..+....+.++|.+. ......++||+.++|+ ++|++++|+
T Consensus 65 -----~--------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~g~~~~i~ 115 (226)
T PRK13222 65 -----G--------------------REPDEELLEKLRELFDRHYAEN----VAGGSRLYPGVKETLAALKAAGYPLAVV 115 (226)
T ss_pred -----c--------------------CCccHHHHHHHHHHHHHHHHHh----ccccCccCCCHHHHHHHHHHCCCeEEEE
Confidence 0 0123344445555566666542 2234689999999999 789999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccCC
Q 027701 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTCN 215 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~~ 215 (220)
||+....++.++++ +|+..+|+.+++++ .||+|++++.++++++.++++++|=.-+
T Consensus 116 S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~ 175 (226)
T PRK13222 116 TNKPTPFVAPLLEA-LGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDS 175 (226)
T ss_pred eCCCHHHHHHHHHH-cCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEEECCC
Confidence 99999999999995 99999999999875 3599999999999999999999886544
No 21
>PLN02940 riboflavin kinase
Probab=99.83 E-value=7.6e-20 Score=165.68 Aligned_cols=158 Identities=9% Similarity=0.046 Sum_probs=114.5
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
.++|||||||||+||.+.+..+++.+++++| .+.. .++++..+|.+....+ ...+.
T Consensus 11 ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G------~~~~--------~~~~~~~~G~~~~~~~-~~~~~--------- 66 (382)
T PLN02940 11 VSHVILDLDGTLLNTDGIVSDVLKAFLVKYG------KQWD--------GREAQKIVGKTPLEAA-ATVVE--------- 66 (382)
T ss_pred CCEEEECCcCcCCcCHHHHHHHHHHHHHHcC------CCCC--------HHHHHHhcCCCHHHHH-HHHHH---------
Confidence 3789999999999999999999999999994 3321 1345667776554322 12111
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~ 158 (220)
.++.+. ...+....+++.|.++ + ....+|||+.++|+ ++|++++|+
T Consensus 67 -------------------------~~~~~~-~~~~~~~~~~~~~~~~----~-~~~~l~pGv~elL~~Lk~~g~~l~Iv 115 (382)
T PLN02940 67 -------------------------DYGLPC-STDEFNSEITPLLSEQ----W-CNIKALPGANRLIKHLKSHGVPMALA 115 (382)
T ss_pred -------------------------HhCCCC-CHHHHHHHHHHHHHHH----H-ccCCCCcCHHHHHHHHHHCCCcEEEE
Confidence 111110 0112223344444332 1 24689999999999 899999999
Q ss_pred cCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccC
Q 027701 159 TSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTC 214 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~ 214 (220)
||+++..++..++.++|+..+|+.|++++ .||+|+++..++++++.++++++|=--
T Consensus 116 Tn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGD 175 (382)
T PLN02940 116 SNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIED 175 (382)
T ss_pred eCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeC
Confidence 99999999988872389999999999986 359999999999999999999988543
No 22
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.82 E-value=1.6e-19 Score=150.86 Aligned_cols=156 Identities=12% Similarity=0.044 Sum_probs=109.1
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
.++|+|||||||+||.+.+..+.+.+++++| .+... .+..+.+.|......+ +.+
T Consensus 4 ~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g------~~~~~-------~~~~~~~~g~~~~~~~--~~~---------- 58 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEFG------ITLSL-------EEVFKRFKGVKLYEII--DII---------- 58 (221)
T ss_pred CCEEEECCCCCCCCChHHHHHHHHHHHHHcC------CCCCH-------HHHHHHhcCCCHHHHH--HHH----------
Confidence 4899999999999999999999999999984 43111 1122344444332211 111
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcC--CHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHHhCCCcEEEEc
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSE--NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVT 159 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~~~g~~l~I~T 159 (220)
...+|+ +.++ ....|++.+...+ ....++||||.++|+..+++++|+|
T Consensus 59 -----------------------~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~~~ivT 108 (221)
T PRK10563 59 -----------------------SKEHGVTLAKAE---LEPVYRAEVARLF----DSELEPIAGANALLESITVPMCVVS 108 (221)
T ss_pred -----------------------HHHhCCCCCHHH---HHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCCEEEEe
Confidence 112222 1122 2233444443221 2357899999999996579999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCc-eEecCC----CCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 160 SNQSRFVETLLRELAGVTITPD-RLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 160 nK~~~~a~~iL~~~~gl~~~f~-~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
|++...++..|++ +|+..+|+ .|++++ .||+|+++..++++++.++++++|=.
T Consensus 109 n~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ig 166 (221)
T PRK10563 109 NGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVD 166 (221)
T ss_pred CCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEe
Confidence 9999999999995 99999995 566653 46999999999999999999998854
No 23
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.81 E-value=3.4e-19 Score=150.12 Aligned_cols=156 Identities=17% Similarity=0.181 Sum_probs=107.0
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|.++||||||||||||.+-...+.+.+++++| ++.. .+..+...|.+....+ ..+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g------~~~~--------~~~~~~~~g~~~~~~~--~~~~~~~----- 59 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYG------IEIS--------DEEIRELHGGGIARII--DLLRKLA----- 59 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcC------CCCC--------HHHHHHHHCCChHHHH--HHHHHHh-----
Confidence 67999999999999999999999999999994 3321 1344455554322111 1111100
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
. +....+.......++.... ......+++|||.++|+ ++|+++++
T Consensus 60 ------~---------------------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~pGv~~~l~~L~~~~i~~av 107 (221)
T COG0637 60 ------A---------------------GEDPADLAELERLLYEAEA-----LELEGLKPIPGVVELLEQLKARGIPLAV 107 (221)
T ss_pred ------c---------------------CCcccCHHHHHHHHHHHHH-----hhhcCCCCCccHHHHHHHHHhcCCcEEE
Confidence 0 0000000000111111111 12345789999999999 77899999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceE
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~ 210 (220)
+||.++..++.+|+. +|+..+|+.++.++ .||+|++.+++++++|..|++++
T Consensus 108 aS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 108 ASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred ecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 999999999999995 99999999977764 46999999999999998888765
No 24
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.81 E-value=3.5e-19 Score=151.24 Aligned_cols=174 Identities=11% Similarity=0.056 Sum_probs=110.2
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccccc
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~~ 82 (220)
++|+|||||||+||.+.+..+.+.+++.++...+ ++.... ....+.++..++.......
T Consensus 11 k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~---------------- 69 (238)
T PRK10748 11 SALTFDLDDTLYDNRPVILRTEQEALAFVQNYHP-ALRSFQ----NEDLQRLRQALREAEPEIY---------------- 69 (238)
T ss_pred eeEEEcCcccccCChHHHHHHHHHHHHHHHHhCc-chhhCC----HHHHHHHHHHHHHhCchhh----------------
Confidence 7999999999999999999999998877721100 000000 0111122221111110000
Q ss_pred ccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH--hCCCcEEEEcC
Q 027701 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTS 160 (220)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~--~~g~~l~I~Tn 160 (220)
..+..........+.+.+|++.+...+..+.+...|.. |.....+|||+.++|+ +++++++|+||
T Consensus 70 --------~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn 136 (238)
T PRK10748 70 --------HDVTRWRWRAIEQAMLDAGLSAEEASAGADAAMINFAK-----WRSRIDVPQATHDTLKQLAKKWPLVAITN 136 (238)
T ss_pred --------CcHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----HhhcCCCCccHHHHHHHHHcCCCEEEEEC
Confidence 00000011122334556677655543333333333322 2234689999999999 66799999999
Q ss_pred CchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccCCC
Q 027701 161 NQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTCNP 216 (220)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~~~ 216 (220)
++.. ++ ++|+..+|+.|++++ .||+|+++.+++++++.++++++|=.-++
T Consensus 137 ~~~~-----~~-~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~ 190 (238)
T PRK10748 137 GNAQ-----PE-LFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDL 190 (238)
T ss_pred CCch-----HH-HCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCc
Confidence 9875 47 499999999999875 35999999999999999999999976553
No 25
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.80 E-value=8e-19 Score=146.18 Aligned_cols=79 Identities=20% Similarity=0.121 Sum_probs=70.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCce
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~ 209 (220)
...+|||+.++|+ ++|++++|+||++...+...+++ +|+..+|+.|++++ .||+|++++.++++++.+++++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 4689999999999 78999999999999999999995 99999999998875 3599999999999999999999
Q ss_pred EeccCCC
Q 027701 210 QRSTCNP 216 (220)
Q Consensus 210 ~~~~~~~ 216 (220)
+|=--++
T Consensus 171 ~~igDs~ 177 (221)
T TIGR02253 171 VMVGDRL 177 (221)
T ss_pred EEECCCh
Confidence 8865444
No 26
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.80 E-value=7.2e-19 Score=144.92 Aligned_cols=172 Identities=15% Similarity=0.140 Sum_probs=110.8
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhc-ccccc------cccchhHHHHHHHHHhcc
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMH-TLRPV------VETGYDTLLLVRLLLEMR 75 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~-~ir~~------Ig~G~~~~~~~~~l~~~~ 75 (220)
++|+|||||||+||.+.+..+.+.+++++| ++... .++...+. ..+.+ .|.+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------------- 59 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYG------VEVSP-DELEQAFRRAFKAMSEAFPNFGFS-------------- 59 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhC------CCCCH-HHHHHHHHHHHHHHHhhCCCCCCC--------------
Confidence 689999999999999999999999999994 44211 11111110 01100 0000
Q ss_pred cccccccccccCcchHHHhhhhhhhhHHHHHhhcC-CHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hC
Q 027701 76 LPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSE-NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LA 151 (220)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~ 151 (220)
.+.+..++ |..+........|. +.+.+.+.+..++++|... ...++|||+.++|+ ++
T Consensus 60 ----------~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~l~~L~~~ 120 (203)
T TIGR02252 60 ----------SGLTPQQW---WQKLVRDTFGRAGVPDPESFEKIFEELYSYFATP------EPWQVYPDAIKLLKDLRER 120 (203)
T ss_pred ----------CCCCHHHH---HHHHHHHHHHhcCCCCchhHHHHHHHHHHHhcCC------CcceeCcCHHHHHHHHHHC
Confidence 01111100 11111111122221 2334444555555554321 23579999999999 68
Q ss_pred CCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccCCC
Q 027701 152 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTCNP 216 (220)
Q Consensus 152 g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~~~ 216 (220)
|++++|+||++.. .+..|++ +|+..+|+.|++++ .||+|+++.+++++++.++++++|=.-++
T Consensus 121 g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~ 187 (203)
T TIGR02252 121 GLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSL 187 (203)
T ss_pred CCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCc
Confidence 9999999999876 4788995 99999999999875 35999999999999999999999865443
No 27
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.80 E-value=5.7e-19 Score=163.28 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=109.3
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|.++|||||||||+||.+.+..+++.++++++.....+... +.+.++.++|....... ..+..
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~--------~~~~~~~~~G~~~~~~~--~~l~~------- 302 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVT--------PIDKYREIMGVPLPKVW--EALLP------- 302 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCC--------CHHHHHHHcCCChHHHH--HHHhh-------
Confidence 66899999999999999999999999999983110000010 12356667776654422 11110
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I 157 (220)
..+ .+...+....|+++|.+.. .....++|||+.++|+ ++|++++|
T Consensus 303 --------------------------~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~l~pG~~e~L~~Lk~~g~~l~I 351 (459)
T PRK06698 303 --------------------------DHS--LEIREQTDAYFLERLIENI---KSGKGALYPNVKEIFTYIKENNCSIYI 351 (459)
T ss_pred --------------------------hcc--hhHHHHHHHHHHHHhHHHH---hhcCCCcCCCHHHHHHHHHHCCCeEEE
Confidence 000 0111122233334332211 1224689999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecCCC---CCcHHHHHHHHhhCCCCCCceEe
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~---~pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
+||++...++.+|++ +|+..+|+.+++++. +|||+++..++++++ +++++|
T Consensus 352 vS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~ 405 (459)
T PRK06698 352 ASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAV 405 (459)
T ss_pred EeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEE
Confidence 999999999999995 999999999998762 489999999999864 456665
No 28
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.80 E-value=4.5e-19 Score=144.29 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=68.0
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC---C-----CCcHHHHHHHHhhCCCCCCc
Q 027701 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---T-----GPKVNVLKQLQKKPEHQGLR 208 (220)
Q Consensus 137 ~~~lypGv~elL~~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~---~-----~pkp~~l~~~l~~~~~~~~~ 208 (220)
..++|||+.++|+....+++|+||++...+..++++ +|+..+|+.|++++ . ||+|++++++++++|.++++
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 457999999999933368999999999999999995 99999999998874 2 79999999999999999999
Q ss_pred eEeccCC
Q 027701 209 LQRSTCN 215 (220)
Q Consensus 209 ~~~~~~~ 215 (220)
++|=--+
T Consensus 161 ~l~vgD~ 167 (184)
T TIGR01993 161 AIFFDDS 167 (184)
T ss_pred eEEEeCC
Confidence 8875443
No 29
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.80 E-value=7.3e-19 Score=153.50 Aligned_cols=176 Identities=15% Similarity=0.120 Sum_probs=105.6
Q ss_pred ceEEEecCcccccCh-HHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 3 DLYALDFDGVICDSC-EETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 3 ~~viFDlDGTLvDS~-~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
++|||||||||+||. +.+..+++.+++++| +++... -......++. +|.|...+. +.+...
T Consensus 41 k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G------~~~~~~--~~~~~~~~~~-~g~~~~~~~--~~~~~~------- 102 (286)
T PLN02779 41 EALLFDCDGVLVETERDGHRVAFNDAFKEFG------LRPVEW--DVELYDELLN-IGGGKERMT--WYFNEN------- 102 (286)
T ss_pred cEEEEeCceeEEccccHHHHHHHHHHHHHcC------CCCCCC--CHHHHHHHHc-cCCChHHHH--HHHHHc-------
Confidence 789999999999999 888899999999994 421100 0011112334 776654322 222110
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhcccccccc-CCCCCccHHHHHH---hCCCcEEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIG-ANRLYPGVSDALK---LASSRIYI 157 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~-~~~lypGv~elL~---~~g~~l~I 157 (220)
+.+.... .....+++...+....+.+.+...|...+.. ..++|||+.++|+ ++|++++|
T Consensus 103 -----~~~~~~~------------~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~I 165 (286)
T PLN02779 103 -----GWPTSTI------------EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAV 165 (286)
T ss_pred -----CCCcccc------------ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEE
Confidence 0000000 0000011111112222222111112211111 2489999999999 78999999
Q ss_pred EcCCchHHHHHHHHHhhCCC---CCCceEecCC---CCCcHHHHHHHHhhCCCCCCceEeccC
Q 027701 158 VTSNQSRFVETLLRELAGVT---ITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLQRSTC 214 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~---~~f~~v~G~~---~~pkp~~l~~~l~~~~~~~~~~~~~~~ 214 (220)
+||++...+..++++ ++.. .+|+.+.|.+ .||+|+++.+++++++.++++++|=--
T Consensus 166 vTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGD 227 (286)
T PLN02779 166 CSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVED 227 (286)
T ss_pred EeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEEEeC
Confidence 999999999999995 6433 3445554443 359999999999999999999988543
No 30
>PRK09449 dUMP phosphatase; Provisional
Probab=99.79 E-value=2.1e-18 Score=144.19 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=67.1
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCC-CCce
Q 027701 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (220)
Q Consensus 137 ~~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~-~~~~ 209 (220)
..++|||+.++|+ .+|++++|+||++...++..|++ +|+..+|+.|++++ .||+|+++.++++++|.. ++++
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3679999999999 77899999999999999999995 99999999998875 369999999999999975 4788
Q ss_pred Eec
Q 027701 210 QRS 212 (220)
Q Consensus 210 ~~~ 212 (220)
+|=
T Consensus 172 ~~v 174 (224)
T PRK09449 172 LMV 174 (224)
T ss_pred EEE
Confidence 883
No 31
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.76 E-value=8.4e-18 Score=139.80 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=70.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhC-CCCCCc
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKP-EHQGLR 208 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~-~~~~~~ 208 (220)
..++|||+.++|+ ++ ++++|+||++...++.++++ +|+..+|+.|++++ .||+|+++.++++++ +.++++
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 4689999999999 55 99999999999999999995 99999999999875 359999999999999 999999
Q ss_pred eEeccCCC
Q 027701 209 LQRSTCNP 216 (220)
Q Consensus 209 ~~~~~~~~ 216 (220)
++|=.-++
T Consensus 173 ~v~igD~~ 180 (224)
T TIGR02254 173 VLMIGDSL 180 (224)
T ss_pred eEEECCCc
Confidence 99976554
No 32
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.76 E-value=2.8e-18 Score=141.02 Aligned_cols=144 Identities=13% Similarity=0.057 Sum_probs=96.7
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccc
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLR 80 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~ 80 (220)
|.++|||||||||+|+. .+++.+++++ |++. ++++..+|.+....+ ..
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~------g~~~----------~~~~~~~g~~~~~~~-~~----------- 48 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKY------NIPT----------DHILKMIQDERFRDP-GE----------- 48 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhc------CCCH----------HHHHHHHhHhhhcCH-HH-----------
Confidence 88999999999999954 4567788888 4431 345555664422111 00
Q ss_pred ccccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH--hCCCcEEEE
Q 027701 81 KSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIV 158 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~--~~g~~l~I~ 158 (220)
.++.++++..+.+..|++. .+....++|||+.++|+ .++++++++
T Consensus 49 --------------------------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~pG~~e~L~~L~~~~~~~i~ 95 (197)
T PHA02597 49 --------------------------LFGCDQELAKKLIEKYNNS-------DFIRYLSAYDDALDVINKLKEDYDFVAV 95 (197)
T ss_pred --------------------------HhcccHHHHHHHhhhhhHH-------HHHHhccCCCCHHHHHHHHHhcCCEEEE
Confidence 1122233334444444421 22335679999999999 444688999
Q ss_pred cCCchHHHHHHHHHhhCCCC----CCceEecCC-CCCcHHHHHHHHhhCCCCCCceEec
Q 027701 159 TSNQSRFVETLLRELAGVTI----TPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~----~f~~v~G~~-~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
||++......++++ +|+.. +|+.++|.+ .+|||+++..++++++ +++++|=
T Consensus 96 Tn~~~~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~v 151 (197)
T PHA02597 96 TALGDSIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFV 151 (197)
T ss_pred eCCccchhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEe
Confidence 99988877777774 77764 567777765 4599999999999999 6777663
No 33
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.75 E-value=1.3e-17 Score=167.44 Aligned_cols=160 Identities=16% Similarity=0.162 Sum_probs=112.6
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
.++|+|||||||+||.+.+..+++.+++++ |++. . .++++.++|.+....+ ..+.
T Consensus 75 ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~------G~~i-t-------~e~~~~~~G~~~~~~~--~~~~--------- 129 (1057)
T PLN02919 75 VSAVLFDMDGVLCNSEEPSRRAAVDVFAEM------GVEV-T-------VEDFVPFMGTGEANFL--GGVA--------- 129 (1057)
T ss_pred CCEEEECCCCCeEeChHHHHHHHHHHHHHc------CCCC-C-------HHHHHHHhCCCHHHHH--HHHH---------
Confidence 379999999999999999999999999999 4432 1 1345566676643322 1111
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIV 158 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~ 158 (220)
+.+++......+..+.+.+.|.+.|... ....+|||+.++|+ ++|++++|+
T Consensus 130 ------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~Iv 183 (1057)
T PLN02919 130 ------------------------SVKGVKGFDPDAAKKRFFEIYLEKYAKP--NSGIGFPGALELITQCKNKGLKVAVA 183 (1057)
T ss_pred ------------------------HhcCCCCCCHHHHHHHHHHHHHHHhhhc--ccCccCccHHHHHHHHHhCCCeEEEE
Confidence 0111100000111222333333322211 12358999999999 889999999
Q ss_pred cCCchHHHHHHHHHhhCCC-CCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 159 TSNQSRFVETLLRELAGVT-ITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~-~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
||+....++.+|++ +|+. .+|+.+++++ .||+|+++++++++++..+++++|=-
T Consensus 184 Sn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~Ig 242 (1057)
T PLN02919 184 SSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIE 242 (1057)
T ss_pred eCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEEc
Confidence 99999999999995 9996 7899999886 35999999999999999999998843
No 34
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.73 E-value=1.4e-17 Score=131.66 Aligned_cols=79 Identities=18% Similarity=0.230 Sum_probs=71.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCce
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~ 209 (220)
..++|||+.++|+ ++|++++|+||.+...++..+++ +|+..+|+.+++++ .||+|+++..++++++++++++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4689999999999 69999999999999999999996 99999999998875 3599999999999999999999
Q ss_pred EeccCCC
Q 027701 210 QRSTCNP 216 (220)
Q Consensus 210 ~~~~~~~ 216 (220)
+|=.-++
T Consensus 154 ~~vgD~~ 160 (176)
T PF13419_consen 154 LFVGDSP 160 (176)
T ss_dssp EEEESSH
T ss_pred EEEeCCH
Confidence 9866554
No 35
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.72 E-value=7e-17 Score=132.68 Aligned_cols=78 Identities=17% Similarity=0.192 Sum_probs=70.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceE
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~ 210 (220)
.++|||+.++|+ ++|++++|+||.+...++.++++ +|+..+|+.|++++ .||+|+++..++++++.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 579999999999 77999999999999999999995 99999999999876 35999999999999999999999
Q ss_pred eccCCC
Q 027701 211 RSTCNP 216 (220)
Q Consensus 211 ~~~~~~ 216 (220)
|-.-++
T Consensus 170 ~vgD~~ 175 (198)
T TIGR01428 170 FVASNP 175 (198)
T ss_pred EEeCCH
Confidence 865443
No 36
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.72 E-value=6e-17 Score=136.55 Aligned_cols=78 Identities=12% Similarity=0.079 Sum_probs=70.2
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCce
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRL 209 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~ 209 (220)
..++|||+.++|+ ++|++++|+||++...++..+++ +|+..+|+.|++++ .||+|+++++++++++.+++++
T Consensus 91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 169 (224)
T PRK14988 91 RAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERT 169 (224)
T ss_pred cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 4789999999999 78999999999999999999995 99999999999875 3599999999999999999999
Q ss_pred EeccCC
Q 027701 210 QRSTCN 215 (220)
Q Consensus 210 ~~~~~~ 215 (220)
+|=--+
T Consensus 170 l~igDs 175 (224)
T PRK14988 170 LFIDDS 175 (224)
T ss_pred EEEcCC
Confidence 885433
No 37
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.72 E-value=1.7e-16 Score=125.15 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=65.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC---CCCcHHHHHHHHhhCCCCCCceE
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---TGPKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~---~~pkp~~l~~~l~~~~~~~~~~~ 210 (220)
....+||+.++|+ ++|++++|+||++...+...+++ + +..+|+.|++++ .||+|+++.+++++++.++ +++
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 3457899999999 78999999999999999999995 7 888999998876 3699999999999999998 888
Q ss_pred ecc
Q 027701 211 RST 213 (220)
Q Consensus 211 ~~~ 213 (220)
|=.
T Consensus 139 ~iG 141 (154)
T TIGR01549 139 HVG 141 (154)
T ss_pred EEe
Confidence 743
No 38
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.70 E-value=4.1e-17 Score=135.34 Aligned_cols=75 Identities=13% Similarity=0.074 Sum_probs=63.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH--HHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGL 207 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~--a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~ 207 (220)
..++|||+.++|+ ++|++++|+||++... ....+.+ +++..+|+.|++++ .||+|+++..+++++|.+++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4679999999999 7899999999997654 4444553 68888999998875 36999999999999999999
Q ss_pred ceEec
Q 027701 208 RLQRS 212 (220)
Q Consensus 208 ~~~~~ 212 (220)
+++|=
T Consensus 171 ~~l~i 175 (211)
T TIGR02247 171 ECVFL 175 (211)
T ss_pred HeEEE
Confidence 99984
No 39
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.69 E-value=1.2e-16 Score=128.55 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=66.3
Q ss_pred CCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEec
Q 027701 137 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 137 ~~~lypGv~elL~~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
...+|||+.++|+ +++|+||++....+..+++ +|+..+|+.|++++ .||+|++.+.+++++|.++++++|=
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 3579999999997 5899999999999999995 99999999988875 3599999999999999999999986
Q ss_pred cCCC
Q 027701 213 TCNP 216 (220)
Q Consensus 213 ~~~~ 216 (220)
.-++
T Consensus 163 gD~~ 166 (175)
T TIGR01493 163 AAHQ 166 (175)
T ss_pred ecCh
Confidence 5543
No 40
>PLN02811 hydrolase
Probab=99.63 E-value=6.7e-15 Score=123.30 Aligned_cols=151 Identities=13% Similarity=0.050 Sum_probs=100.1
Q ss_pred cCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccccccccCc
Q 027701 9 FDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGL 88 (220)
Q Consensus 9 lDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~~~~~~~~ 88 (220)
|||||+||.+.+..+++.+++++| ++. . .+.++.++|.+....+. ..+... +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g------~~~-~-------~~~~~~~~G~~~~~~~~-~~~~~~------------~~ 53 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYG------KTF-D-------WSLKAKMMGKKAIEAAR-IFVEES------------GL 53 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcC------CCC-C-------HHHHHHccCCCHHHHHH-HHHHHh------------CC
Confidence 799999999999999999999994 431 1 23466678876543221 111110 00
Q ss_pred chHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHH
Q 027701 89 TVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRF 165 (220)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~ 165 (220)
+. ....+.+.+....+...+ .....+||||.++|+ ++|++++|+||++...
T Consensus 54 ~~------------------~~~~~~~~~~~~~~~~~~--------~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 54 SD------------------SLSPEDFLVEREAMLQDL--------FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CC------------------CCCHHHHHHHHHHHHHHH--------HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 00 001112212112121111 124689999999999 8899999999998764
Q ss_pred HH-HHHHHhhCCCCCCceEecCC------CCCcHHHHHHHHhhCC---CCCCceEecc
Q 027701 166 VE-TLLRELAGVTITPDRLYGLG------TGPKVNVLKQLQKKPE---HQGLRLQRST 213 (220)
Q Consensus 166 a~-~iL~~~~gl~~~f~~v~G~~------~~pkp~~l~~~l~~~~---~~~~~~~~~~ 213 (220)
.. .+++ +.++..+|+.+++++ .||+|+++..++++++ .++++++|=-
T Consensus 108 ~~~~~~~-~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~Ig 164 (220)
T PLN02811 108 FDLKTQR-HGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFE 164 (220)
T ss_pred HHHHHcc-cHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEe
Confidence 44 4555 367888999888876 2599999999999996 8888888743
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.61 E-value=6.2e-15 Score=121.61 Aligned_cols=77 Identities=13% Similarity=0.161 Sum_probs=66.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEe
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
.+||||.++|+ ++|++++|+||++......++..+.++..+|+.|++++ .||+|++++.+++++|.++++++|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 58999999999 78999999999999988777763247888999998875 369999999999999999999998
Q ss_pred ccCC
Q 027701 212 STCN 215 (220)
Q Consensus 212 ~~~~ 215 (220)
=--+
T Consensus 164 vgD~ 167 (199)
T PRK09456 164 FDDN 167 (199)
T ss_pred eCCC
Confidence 6544
No 42
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.60 E-value=1.7e-14 Score=116.04 Aligned_cols=76 Identities=17% Similarity=0.146 Sum_probs=66.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceE
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~ 210 (220)
.++|||+.++|+ ++|++++|+||.+... ..++.+ +|+..+|+.|++++ .||+|+++..++++++.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 689999999999 7899999999999998 777774 99999999988754 35999999999999999999999
Q ss_pred eccCC
Q 027701 211 RSTCN 215 (220)
Q Consensus 211 ~~~~~ 215 (220)
|=.-+
T Consensus 162 ~vgD~ 166 (183)
T TIGR01509 162 FVDDS 166 (183)
T ss_pred EEcCC
Confidence 85443
No 43
>PRK11590 hypothetical protein; Provisional
Probab=99.60 E-value=7e-15 Score=122.77 Aligned_cols=133 Identities=15% Similarity=0.164 Sum_probs=90.6
Q ss_pred ceEEEecCcccccChHHHHHHHHHHH-HHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAA-RVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~-~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
|+++|||||||+ .+++..+++..+ +++ |++... ...++.++|.|.......+.+
T Consensus 7 k~~iFD~DGTL~--~~d~~~~~~~~~~~~~------g~~~~~-------~~~~~~~ig~~l~~~~~~~~~---------- 61 (211)
T PRK11590 7 RVVFFDLDGTLH--QQDMFGSFLRYLLRRQ------PLNLLL-------VLPLLPVIGLGLLVKGRAARW---------- 61 (211)
T ss_pred eEEEEecCCCCc--ccchHHHHHHHHHHhc------chhhHH-------HhHHHHHhccCcccchhhhhh----------
Confidence 799999999999 666889998888 777 343221 356788888876432210000
Q ss_pred cccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHH-H---hCCCcEEE
Q 027701 82 SSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-K---LASSRIYI 157 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL-~---~~g~~l~I 157 (220)
+ ...+ .+....|++++++++..+.|+++|.+. ..+|||+.++| + ++|++++|
T Consensus 62 -----~--~~~~---------~~~~~~g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~I 117 (211)
T PRK11590 62 -----P--MSLL---------LWGCTFGHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWL 117 (211)
T ss_pred -----h--HHHH---------HHHHHcCCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEE
Confidence 0 0000 001112667777888888888877532 57799999999 4 57999999
Q ss_pred EcCCchHHHHHHHHHhhCCCCCCceEecC
Q 027701 158 VTSNQSRFVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 158 ~TnK~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
||||++..++.++++ +|+.. .+.++|.
T Consensus 118 vSas~~~~~~~il~~-l~~~~-~~~~i~t 144 (211)
T PRK11590 118 ITGSPQPLVEQVYFD-TPWLP-RVNLIAS 144 (211)
T ss_pred EeCCcHHHHHHHHHH-ccccc-cCceEEE
Confidence 999999999999995 88632 3334444
No 44
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.55 E-value=1e-13 Score=115.39 Aligned_cols=75 Identities=15% Similarity=0.077 Sum_probs=62.9
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE------------ecCCC--CCcHHHHHHHHh
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------------YGLGT--GPKVNVLKQLQK 200 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v------------~G~~~--~pkp~~l~~~l~ 200 (220)
.+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .|... +|||+++.++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 579999999999 78999999999999999999995 9998877531 22221 279999999999
Q ss_pred hCCCCCCceEecc
Q 027701 201 KPEHQGLRLQRST 213 (220)
Q Consensus 201 ~~~~~~~~~~~~~ 213 (220)
+++.++++++|=.
T Consensus 163 ~~~~~~~~~i~iG 175 (219)
T TIGR00338 163 KEGISPENTVAVG 175 (219)
T ss_pred HcCCCHHHEEEEE
Confidence 9999999998843
No 45
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.54 E-value=2.9e-14 Score=121.44 Aligned_cols=68 Identities=9% Similarity=0.013 Sum_probs=55.8
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCC----chHHHHHHHHHhhCCCCCCceEecCCCC--CcHHHHHHHHhhCCC
Q 027701 135 IGANRLYPGVSDALK---LASSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEH 204 (220)
Q Consensus 135 ~~~~~lypGv~elL~---~~g~~l~I~TnK----~~~~a~~iL~~~~gl~~~f~~v~G~~~~--pkp~~l~~~l~~~~~ 204 (220)
...+.+++|+.++|+ ++|++++|+||| ++..++.++++ +|+..+|+.|+|++.. +||+.. .++++++.
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~~i 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKT-QWIQDKNI 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHH-HHHHhCCC
Confidence 345789999999999 899999999998 88899999994 9999999999998742 555554 45666654
No 46
>PLN02954 phosphoserine phosphatase
Probab=99.53 E-value=1.3e-13 Score=115.25 Aligned_cols=71 Identities=18% Similarity=0.364 Sum_probs=56.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC--CCCce---------EecCC-------CCCcHHHHH
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG-------TGPKVNVLK 196 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~--~~f~~---------v~G~~-------~~pkp~~l~ 196 (220)
..+|||+.++|+ ++|++++|+||+.+..++.++++ +|+. .+|+. +.|.+ .++||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 469999999999 88999999999999999999995 9997 34532 33332 137999999
Q ss_pred HHHhhCCCCCCceEe
Q 027701 197 QLQKKPEHQGLRLQR 211 (220)
Q Consensus 197 ~~l~~~~~~~~~~~~ 211 (220)
+++++++. .+++|
T Consensus 162 ~~~~~~~~--~~~i~ 174 (224)
T PLN02954 162 HIKKKHGY--KTMVM 174 (224)
T ss_pred HHHHHcCC--CceEE
Confidence 99998874 45655
No 47
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.51 E-value=4.9e-14 Score=115.22 Aligned_cols=76 Identities=7% Similarity=-0.011 Sum_probs=62.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC-C-------------CCcHHHHHHHH
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-T-------------GPKVNVLKQLQ 199 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~-------------~pkp~~l~~~l 199 (220)
..++|||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.++..+ . .+|++.+.+++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 3579999999999 78999999999999999999995 99987776544321 1 14457899999
Q ss_pred hhCCCCCCceEecc
Q 027701 200 KKPEHQGLRLQRST 213 (220)
Q Consensus 200 ~~~~~~~~~~~~~~ 213 (220)
++++.++++++|-.
T Consensus 157 ~~~~~~~~~~i~iG 170 (201)
T TIGR01491 157 RELNPSLTETVAVG 170 (201)
T ss_pred HHhCCCHHHEEEEc
Confidence 99999999988753
No 48
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.45 E-value=4.2e-12 Score=105.82 Aligned_cols=80 Identities=19% Similarity=0.101 Sum_probs=70.0
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceE
Q 027701 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 137 ~~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~ 210 (220)
..++||++.+.|+ .+.++++|+||-........|++ +|+..+||.|+.++ .||+|++...+++++|.++++++
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 3689999999999 33388999999988999999996 99999999998876 35999999999999999999999
Q ss_pred eccCCCC
Q 027701 211 RSTCNPE 217 (220)
Q Consensus 211 ~~~~~~~ 217 (220)
|=.-+++
T Consensus 176 ~VgD~~~ 182 (229)
T COG1011 176 FVGDSLE 182 (229)
T ss_pred EECCChh
Confidence 9766554
No 49
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.45 E-value=7.7e-13 Score=108.95 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=53.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE---------ecCCCCCcHHHHHHHHhhCCC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL---------YGLGTGPKVNVLKQLQKKPEH 204 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v---------~G~~~~pkp~~l~~~l~~~~~ 204 (220)
..++|||+.++|+ ++ ++++|+||+....++.++++ +|+..+|+.. +|.. .++|+....+++.++.
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~-~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYD-LRQPDGKRQAVKALKS 142 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECcc-ccccchHHHHHHHHHH
Confidence 4679999999999 55 99999999999999999995 9998777542 2322 2344444555666655
Q ss_pred CCCceEec
Q 027701 205 QGLRLQRS 212 (220)
Q Consensus 205 ~~~~~~~~ 212 (220)
.+.+++|-
T Consensus 143 ~~~~~v~i 150 (205)
T PRK13582 143 LGYRVIAA 150 (205)
T ss_pred hCCeEEEE
Confidence 66677663
No 50
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.40 E-value=1.9e-12 Score=108.40 Aligned_cols=74 Identities=15% Similarity=0.084 Sum_probs=54.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC--CC--ceEecCC----CCCcHHHH----------
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--TP--DRLYGLG----TGPKVNVL---------- 195 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~--~f--~~v~G~~----~~pkp~~l---------- 195 (220)
...+|||+.++|+ ++|++++|+||+....++.+|++ + +.. .+ +..++++ .+|+|...
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 4689999999999 89999999999999999999995 7 643 22 2223322 23555432
Q ss_pred HHHHhhCCCCCCceEec
Q 027701 196 KQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 196 ~~~l~~~~~~~~~~~~~ 212 (220)
..++++++.++.+++|=
T Consensus 150 ~~~l~~~~~~~~~~i~i 166 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVI 166 (219)
T ss_pred HHHHHHhccCCCCEEEE
Confidence 46788888888888774
No 51
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.38 E-value=1.5e-12 Score=100.40 Aligned_cols=76 Identities=29% Similarity=0.216 Sum_probs=63.5
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc--------hHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhC-CCC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP-EHQ 205 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~--------~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~-~~~ 205 (220)
..+|||+.++|+ ++|++++|+||++ ...++.++++ +|+..++..+.+...||+|+++.++++++ +.+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 468999999999 8999999999999 8899999995 99975554444423469999999999999 599
Q ss_pred CCceEeccC
Q 027701 206 GLRLQRSTC 214 (220)
Q Consensus 206 ~~~~~~~~~ 214 (220)
+++++|=--
T Consensus 103 ~~~~v~IGD 111 (132)
T TIGR01662 103 PEESVYVGD 111 (132)
T ss_pred hhheEEEcC
Confidence 999998544
No 52
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.34 E-value=2e-11 Score=98.63 Aligned_cols=71 Identities=14% Similarity=0.213 Sum_probs=59.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCC-----------------------C-C
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----------------------G-P 190 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-----------------------~-p 190 (220)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|+|.+. + +
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 589999999999 78999999999999999999995 999999999997421 1 5
Q ss_pred cHHHHHHHHhhCCCCCCceEec
Q 027701 191 KVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 191 kp~~l~~~l~~~~~~~~~~~~~ 212 (220)
|++++.++.++. +.+++|=
T Consensus 150 K~~~~~~~~~~~---~~~~i~i 168 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYI 168 (188)
T ss_pred HHHHHHHHHhhc---CceEEEE
Confidence 888888887764 6777764
No 53
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.33 E-value=2.1e-11 Score=102.75 Aligned_cols=152 Identities=13% Similarity=0.099 Sum_probs=101.9
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhccccccccc
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKS 82 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~~ 82 (220)
.+++||+||||+||-..++.+.+.-+.++|.+ . + ........|.+..... +.+.. ..+
T Consensus 11 ~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~------~-~-------~~~~~~~mG~~~~eaa--~~~~~-~~~----- 68 (222)
T KOG2914|consen 11 SACLFDMDGTLVDTEDLYTEAWQELLDRYGKP------Y-P-------WDVKVKSMGKRTSEAA--RLFVK-KLP----- 68 (222)
T ss_pred eeEEEecCCcEEecHHHHHHHHHHHHHHcCCC------C-h-------HHHHHHHcCCCHHHHH--HHHHh-hcC-----
Confidence 58999999999999999999999999999532 1 1 2233446666655433 33321 000
Q ss_pred ccccCcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEEc
Q 027701 83 SVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVT 159 (220)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~T 159 (220)
+. ++.+++......-... ......+.||+..++. ..|++++++|
T Consensus 69 ---dp----------------------~s~ee~~~e~~~~~~~--------~~~~~~~~PGa~kLv~~L~~~gip~alat 115 (222)
T KOG2914|consen 69 ---DP----------------------VSREEFNKEEEEILDR--------LFMNSILMPGAEKLVNHLKNNGIPVALAT 115 (222)
T ss_pred ---CC----------------------CCHHHHHHHHHHHHHH--------hccccccCCcHHHHHHHHHhCCCCeeEEe
Confidence 01 1223222222212221 2345789999999999 8999999999
Q ss_pred CCchHHHHHHHHHhhC-CCCCCceEec-CC-----CCCcHHHHHHHHhhCCCCC-CceE
Q 027701 160 SNQSRFVETLLRELAG-VTITPDRLYG-LG-----TGPKVNVLKQLQKKPEHQG-LRLQ 210 (220)
Q Consensus 160 nK~~~~a~~iL~~~~g-l~~~f~~v~G-~~-----~~pkp~~l~~~l~~~~~~~-~~~~ 210 (220)
|-++.....-+.+ ++ +...|..++- .+ -||+|++.+.+++.+|..+ +..+
T Consensus 116 ~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~l 173 (222)
T KOG2914|consen 116 SSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCL 173 (222)
T ss_pred cCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCccceE
Confidence 9999998888885 65 6665665443 32 2399999999999999998 4443
No 54
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.28 E-value=1.2e-11 Score=100.84 Aligned_cols=79 Identities=14% Similarity=0.040 Sum_probs=64.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhhCCC---------CCCceEecCCCC----CcHHHHHHHH
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG----PKVNVLKQLQ 199 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK-~~~~a~~iL~~~~gl~---------~~f~~v~G~~~~----pkp~~l~~~l 199 (220)
...+||||.++|+ ++|++++|+||+ +...++.+|+. +|+. .+|+.++|++.. |.|+++..+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~ 121 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVN 121 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhh
Confidence 4689999999999 899999999999 99999999994 9998 999999998642 3345555555
Q ss_pred hhC--CCCCCceEeccCCC
Q 027701 200 KKP--EHQGLRLQRSTCNP 216 (220)
Q Consensus 200 ~~~--~~~~~~~~~~~~~~ 216 (220)
+.+ +.++++++|=--+|
T Consensus 122 ~~~~~gl~p~e~l~VgDs~ 140 (174)
T TIGR01685 122 KVDPSVLKPAQILFFDDRT 140 (174)
T ss_pred hcccCCCCHHHeEEEcChh
Confidence 555 79999999865443
No 55
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.25 E-value=1.2e-11 Score=97.59 Aligned_cols=75 Identities=24% Similarity=0.195 Sum_probs=59.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCC--CceEec-CC----CCCcH
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LG----TGPKV 192 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~---------------~~a~~iL~~~~gl~~~--f~~v~G-~~----~~pkp 192 (220)
.++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ ++ .||+|
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCH
Confidence 368999999999 89999999999984 677888995 998632 222222 22 36999
Q ss_pred HHHHHHHhhCCCCCCceEecc
Q 027701 193 NVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 193 ~~l~~~l~~~~~~~~~~~~~~ 213 (220)
+++.+++++++.++++++|=-
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IG 125 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVG 125 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEc
Confidence 999999999999999998843
No 56
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.22 E-value=3.7e-11 Score=97.80 Aligned_cols=74 Identities=18% Similarity=0.157 Sum_probs=58.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEecC-----C----CCC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----G----TGP 190 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~-----~----~~p 190 (220)
..+|||+.++|+ ++|++++|+||++. +....++++ +|+ +|+.++++ + .||
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCCC
Confidence 468999999999 88999999999973 445567774 777 46665532 1 359
Q ss_pred cHHHHHHHHhhCCCCCCceEeccC
Q 027701 191 KVNVLKQLQKKPEHQGLRLQRSTC 214 (220)
Q Consensus 191 kp~~l~~~l~~~~~~~~~~~~~~~ 214 (220)
+|+++.++++.++.++++++|=.-
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgD 128 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGD 128 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeC
Confidence 999999999999999999998543
No 57
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.19 E-value=3.5e-10 Score=95.45 Aligned_cols=80 Identities=15% Similarity=0.095 Sum_probs=66.3
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh---CCCCCCc----eEecCCCCCcHHHHHHHHhhCCCC
Q 027701 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---GVTITPD----RLYGLGTGPKVNVLKQLQKKPEHQ 205 (220)
Q Consensus 136 ~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~---gl~~~f~----~v~G~~~~pkp~~l~~~l~~~~~~ 205 (220)
....+|||+.++|+ ++|++++|+||++....+.+++ ++ ++..+|+ .++| .||+|+++.++++++|.+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~-~~~~~~L~~~f~~~fd~~~g--~KP~p~~y~~i~~~lgv~ 168 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFG-HSDAGNLTPYFSGYFDTTVG--LKTEAQSYVKIAGQLGSP 168 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh-hccccchhhhcceEEEeCcc--cCCCHHHHHHHHHHhCcC
Confidence 35789999999999 8899999999999999998888 46 4444444 4444 479999999999999999
Q ss_pred CCceEeccCCCCC
Q 027701 206 GLRLQRSTCNPEE 218 (220)
Q Consensus 206 ~~~~~~~~~~~~~ 218 (220)
+++++|=.-++.+
T Consensus 169 p~e~lfVgDs~~D 181 (220)
T TIGR01691 169 PREILFLSDIINE 181 (220)
T ss_pred hhHEEEEeCCHHH
Confidence 9999997766544
No 58
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.19 E-value=3.4e-10 Score=100.64 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=61.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc----e--------EecC--CCCCcHHHHHHHH
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD----R--------LYGL--GTGPKVNVLKQLQ 199 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~----~--------v~G~--~~~pkp~~l~~~l 199 (220)
..+++||+.++|+ +.|++++|+||....+++.++++ +|++..+. . +.|. ..+||++.+++++
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la 257 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLA 257 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHH
Confidence 3679999999999 88999999999999999999995 99875332 1 1221 1349999999999
Q ss_pred hhCCCCCCceEec
Q 027701 200 KKPEHQGLRLQRS 212 (220)
Q Consensus 200 ~~~~~~~~~~~~~ 212 (220)
+++|.+++++++=
T Consensus 258 ~~lgi~~~qtIaV 270 (322)
T PRK11133 258 QEYEIPLAQTVAI 270 (322)
T ss_pred HHcCCChhhEEEE
Confidence 9999999998874
No 59
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.17 E-value=7e-10 Score=92.88 Aligned_cols=59 Identities=17% Similarity=0.354 Sum_probs=50.1
Q ss_pred cCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH----hCCCcEEEEcCCchHHHHHHHHHhhCC
Q 027701 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK----LASSRIYIVTSNQSRFVETLLRELAGV 176 (220)
Q Consensus 109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~----~~g~~l~I~TnK~~~~a~~iL~~~~gl 176 (220)
|.+++++++..+.|++.|.+ .+.+|||+.++|+ ++|++++|||||++..++.+.+. .++
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~ 134 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNF 134 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccc
Confidence 78888888888888887753 2468999999994 47999999999999999999984 665
No 60
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.15 E-value=1.1e-09 Score=89.87 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=74.1
Q ss_pred cCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCce-Ee
Q 027701 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDR-LY 184 (220)
Q Consensus 109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~-v~ 184 (220)
|++.+++.+..+.+.+.+. ...+|||+.++|+ ++|++++|+|++++..++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 7888888777765554432 2479999999999 78999999999999999999995 999877654 22
Q ss_pred c-CC-------C------CCcHHHHHHHHhhCCCCCCceEeccCC
Q 027701 185 G-LG-------T------GPKVNVLKQLQKKPEHQGLRLQRSTCN 215 (220)
Q Consensus 185 G-~~-------~------~pkp~~l~~~l~~~~~~~~~~~~~~~~ 215 (220)
. .+ . ++|++.+.+++++.+.+++++++-+-+
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs 180 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDS 180 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCC
Confidence 1 11 1 157888999999999888887765543
No 61
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.12 E-value=6.8e-11 Score=91.47 Aligned_cols=74 Identities=15% Similarity=-0.014 Sum_probs=68.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCC-chHHHHHHHHHhhC-------CCCCCceEecCCCCCcHHHHHHHHhhCC--CC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVLKQLQKKPE--HQ 205 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK-~~~~a~~iL~~~~g-------l~~~f~~v~G~~~~pkp~~l~~~l~~~~--~~ 205 (220)
++|||+.++|+ ++|++++|+||+ +...+..++++ ++ +..+|+.+++++.+|||+++.++++++| ++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 78999999999 789999999999 99999999995 88 7899999999877799999999999999 99
Q ss_pred CCceEecc
Q 027701 206 GLRLQRST 213 (220)
Q Consensus 206 ~~~~~~~~ 213 (220)
+++++|=-
T Consensus 108 p~~~l~ig 115 (128)
T TIGR01681 108 PKSILFVD 115 (128)
T ss_pred cceEEEEC
Confidence 99999843
No 62
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.10 E-value=1.9e-09 Score=89.83 Aligned_cols=43 Identities=14% Similarity=0.211 Sum_probs=38.2
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc
Q 027701 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD 181 (220)
Q Consensus 138 ~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~ 181 (220)
.++|||+.++|+ +++.+++|+||+...+++.++++ +|++.+|.
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~a 111 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLC 111 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhc
Confidence 579999999999 44469999999999999999995 99997775
No 63
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.00 E-value=6.9e-10 Score=94.64 Aligned_cols=67 Identities=12% Similarity=0.093 Sum_probs=52.6
Q ss_pred cccCCCCCccHHHHHH---hCCCcEEEEcC----CchHHHHHHHHHhhCC--CCCCceEecCCC--CCcHHHHHHHHhhC
Q 027701 134 WIGANRLYPGVSDALK---LASSRIYIVTS----NQSRFVETLLRELAGV--TITPDRLYGLGT--GPKVNVLKQLQKKP 202 (220)
Q Consensus 134 ~~~~~~lypGv~elL~---~~g~~l~I~Tn----K~~~~a~~iL~~~~gl--~~~f~~v~G~~~--~pkp~~l~~~l~~~ 202 (220)
+...+.||||+.++|+ ++|++++++|| |.+..++.++++ +|+ ..+|+.++|++. |+++.. +++++
T Consensus 109 ~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~---~l~~~ 184 (237)
T PRK11009 109 WDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQ---WLKKK 184 (237)
T ss_pred ccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHH---HHHhc
Confidence 3446889999999999 89999999999 567789999984 999 899999999874 344432 44555
Q ss_pred CC
Q 027701 203 EH 204 (220)
Q Consensus 203 ~~ 204 (220)
+.
T Consensus 185 ~i 186 (237)
T PRK11009 185 NI 186 (237)
T ss_pred CC
Confidence 54
No 64
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.00 E-value=1.7e-09 Score=90.28 Aligned_cols=73 Identities=12% Similarity=0.035 Sum_probs=52.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC---ceEecCC----CCCcHHHH----------HH
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLG----TGPKVNVL----------KQ 197 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f---~~v~G~~----~~pkp~~l----------~~ 197 (220)
..++||+.++|+ ++|++++|+||+....++.++++ ++...++ +.+++++ .+|+|+.. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 689999999999 78999999999999999999995 7543333 2333333 23655543 35
Q ss_pred HHhhCCCCCCceEe
Q 027701 198 LQKKPEHQGLRLQR 211 (220)
Q Consensus 198 ~l~~~~~~~~~~~~ 211 (220)
++++++..+.+++|
T Consensus 148 ~l~~~~~~~~~~i~ 161 (214)
T TIGR03333 148 LIRKLSEPNDYHIV 161 (214)
T ss_pred HHHHHhhcCCcEEE
Confidence 66666666677766
No 65
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.99 E-value=1.8e-09 Score=86.53 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=59.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEe---------cC-----CC--CCcHHHHHHH
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GL-----GT--GPKVNVLKQL 198 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~---------G~-----~~--~pkp~~l~~~ 198 (220)
..++||+.++|+ ++|++++|+|+.....++.++++ +|+...|...+ |. .. ..|+..+.++
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 468999999999 88999999999999999999995 99986654322 21 11 1678899999
Q ss_pred HhhCCCCCCceEec
Q 027701 199 QKKPEHQGLRLQRS 212 (220)
Q Consensus 199 l~~~~~~~~~~~~~ 212 (220)
+++++.++.+++|=
T Consensus 151 ~~~~~~~~~~~~~i 164 (177)
T TIGR01488 151 LEESKITLKKIIAV 164 (177)
T ss_pred HHHhCCCHHHEEEE
Confidence 99998888887764
No 66
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.96 E-value=1.1e-08 Score=85.87 Aligned_cols=73 Identities=16% Similarity=0.223 Sum_probs=59.6
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC--------------CCCcHHHHHHHHh
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG--------------TGPKVNVLKQLQK 200 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~--------------~~pkp~~l~~~l~ 200 (220)
.+++||..++++ ++|++++|+|+-+..+++++.+. +|++..+....-.+ ...|.+.+.++++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 689999999999 99999999999999999999996 99986655432211 1158899999999
Q ss_pred hCCCCCCceEe
Q 027701 201 KPEHQGLRLQR 211 (220)
Q Consensus 201 ~~~~~~~~~~~ 211 (220)
++|.+.+++++
T Consensus 155 ~~g~~~~~~~a 165 (212)
T COG0560 155 ELGIPLEETVA 165 (212)
T ss_pred HcCCCHHHeEE
Confidence 99998666554
No 67
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.90 E-value=4.2e-09 Score=99.04 Aligned_cols=70 Identities=19% Similarity=0.310 Sum_probs=59.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch------------HHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHh
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQK 200 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~------------~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~ 200 (220)
+||||.+.|+ ++|++++|+|||+. ..+..+|++ +|+. |+.++|.+ .||+|.++.++++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 6999999999 89999999999998 468899995 9884 88888875 3599999999999
Q ss_pred hCC----CCCCceEec
Q 027701 201 KPE----HQGLRLQRS 212 (220)
Q Consensus 201 ~~~----~~~~~~~~~ 212 (220)
+++ +.+++.+|=
T Consensus 275 ~~~~~~~Id~~~S~~V 290 (526)
T TIGR01663 275 EANDGTEIQEDDCFFV 290 (526)
T ss_pred hcCcccCCCHHHeEEe
Confidence 985 677777763
No 68
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.88 E-value=3.8e-09 Score=84.97 Aligned_cols=74 Identities=24% Similarity=0.240 Sum_probs=62.0
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCc-eEec----CC----C
Q 027701 136 GANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPD-RLYG----LG----T 188 (220)
Q Consensus 136 ~~~~lypGv~elL~---~~g~~l~I~TnK---------------~~~~a~~iL~~~~gl~~~f~-~v~G----~~----~ 188 (220)
...++||||.++|+ ++|++++|+||| +...+..+|++ +|+. |+ .++| ++ .
T Consensus 26 ~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~ 102 (161)
T TIGR01261 26 EKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCR 102 (161)
T ss_pred HHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCC
Confidence 34689999999999 889999999998 46788999995 9997 65 4555 22 3
Q ss_pred CCcHHHHHHHHhhCCCCCCceEec
Q 027701 189 GPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 189 ~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
||+|+++..++++++.++++++|=
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~I 126 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYVI 126 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEE
Confidence 599999999999999999988874
No 69
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.88 E-value=6.1e-09 Score=85.40 Aligned_cols=72 Identities=17% Similarity=0.278 Sum_probs=61.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCC--CCcHHHHHHHHhhCCCCCCceEe
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~--~pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
...++||+.++|+ ++|++++|+|+-....+..+.+. +|+. +.++-+.. +|.+.++.+++++++.++.+++|
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi~---~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGIF---DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTSC---SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccc-cccc---cccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 4478999999999 88999999999999999999995 9993 33333333 68899999999999999889888
Q ss_pred c
Q 027701 212 S 212 (220)
Q Consensus 212 ~ 212 (220)
-
T Consensus 201 v 201 (215)
T PF00702_consen 201 V 201 (215)
T ss_dssp E
T ss_pred E
Confidence 4
No 70
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.86 E-value=1.5e-08 Score=86.12 Aligned_cols=179 Identities=13% Similarity=0.130 Sum_probs=108.4
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHhCCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccc
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVRWPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRK 81 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~ 81 (220)
.|+|.||++|||..+.+......-.+.+++ |++-.. +.+.......... +.. ..|.-
T Consensus 7 iravtfD~~~tLl~~~~~~~~~y~~i~~~~------gl~~~~--------~~~~~~~~~~~~~------~~~-~~p~~-- 63 (237)
T KOG3085|consen 7 IRAVTFDAGGTLLATLPPVMEVYCEIAEAY------GLEYDD--------SLIETIFRKDFKK------MSE-KGPFF-- 63 (237)
T ss_pred eEEEEEeCCCceeecCCccHHHHHHHHHHh------CCCCCH--------HHHhHhhhHHHHh------hcc-cCCcc--
Confidence 389999999999999999999888889999 454111 1222222211110 000 00000
Q ss_pred cccccC-cchHHHhhhhhh-hhHHHHHhhcC-CHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcE
Q 027701 82 SSVAEG-LTVEGILENWLK-IKPVIMEEWSE-NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRI 155 (220)
Q Consensus 82 ~~~~~~-~~~~~~~~~~~~-~~~~~~~~~g~-~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l 155 (220)
....+ ++. .+|-+ +.. ..|+- ..+..++..+.+...+...+. ....++.+|+.++|+ ++|..+
T Consensus 64 -~~~~g~l~~----~~ww~~lv~---~~f~~~~~~~~~~~~~~~~~~~~s~~~---~~~~~~~~~~~~~lq~lR~~g~~l 132 (237)
T KOG3085|consen 64 -GLYSGELTL----SQWWPKLVE---STFGKAGIDYEEELLENFSFRLFSTFA---PSAWKYLDGMQELLQKLRKKGTIL 132 (237)
T ss_pred -cccCCcccH----HHHHHHHHH---HHhccccchhHHHHHhhhhhheecccc---ccCceeccHHHHHHHHHHhCCeEE
Confidence 00001 111 12222 221 12211 112222223333333222211 224578899999999 889999
Q ss_pred EEEcCCchHHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCceEeccCCC
Q 027701 156 YIVTSNQSRFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLRLQRSTCNP 216 (220)
Q Consensus 156 ~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~~~~~~~~~ 216 (220)
+|+||=..+.= .++.. +|+..+||.|+-+. .||+|++...+++.++.+|++++|=--+.
T Consensus 133 ~iisN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l 195 (237)
T KOG3085|consen 133 GIISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLL 195 (237)
T ss_pred EEecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecCcc
Confidence 99999887654 77885 99999999998764 46999999999999999999998854443
No 71
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.80 E-value=1.3e-08 Score=82.18 Aligned_cols=73 Identities=22% Similarity=0.215 Sum_probs=59.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchH------------HHHHHHHHhhCCCCCCceEecC-C---CCCcHHHHHHHH
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGL-G---TGPKVNVLKQLQ 199 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~------------~a~~iL~~~~gl~~~f~~v~G~-~---~~pkp~~l~~~l 199 (220)
.+||||.++|+ ++|++++|+|||+.. .++.+|++ +|+.. +.+++. . .||+|+++..++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~ 118 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQ 118 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHH
Confidence 37999999999 899999999999974 57889995 99964 444443 3 359999999999
Q ss_pred hhCC--CCCCceEeccC
Q 027701 200 KKPE--HQGLRLQRSTC 214 (220)
Q Consensus 200 ~~~~--~~~~~~~~~~~ 214 (220)
++++ ..+++++|=.-
T Consensus 119 ~~~~~~~~~~~~v~VGD 135 (166)
T TIGR01664 119 SQYNSPIKMTRSFYVGD 135 (166)
T ss_pred HHcCCCCCchhcEEEEC
Confidence 9999 88888888543
No 72
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.78 E-value=2.4e-08 Score=80.98 Aligned_cols=73 Identities=23% Similarity=0.223 Sum_probs=58.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEecC------------C
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL------------G 187 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~------------~ 187 (220)
.++||||.++|+ ++|++++|+|||+. .....++++ +|+. |+.++.. +
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccCC
Confidence 468999999999 89999999999995 455567774 7776 5555421 1
Q ss_pred ---CCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 188 ---TGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 188 ---~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
.||+|+++..++++++.++++++|=-
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VG 130 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVG 130 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEc
Confidence 36999999999999999999999843
No 73
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.76 E-value=1.3e-08 Score=90.14 Aligned_cols=81 Identities=16% Similarity=0.069 Sum_probs=72.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHh----hCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCce
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLREL----AGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~----~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~ 209 (220)
...+|||+.++|+ ++|++++|+|||++..+..+++ + +|+..+|+.+.+. .+|||+.+.++++++|+.++++
T Consensus 29 ~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~-~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~ 106 (320)
T TIGR01686 29 LSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE-RRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSF 106 (320)
T ss_pred cCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-hCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcE
Confidence 4568999999999 8999999999999999999999 7 7888899998776 3599999999999999999999
Q ss_pred EeccCCCCCC
Q 027701 210 QRSTCNPEEC 219 (220)
Q Consensus 210 ~~~~~~~~~~ 219 (220)
+|---||-+|
T Consensus 107 vfidD~~~d~ 116 (320)
T TIGR01686 107 LFIDDNPAER 116 (320)
T ss_pred EEECCCHHHH
Confidence 9987776554
No 74
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.72 E-value=1.2e-08 Score=80.77 Aligned_cols=77 Identities=12% Similarity=-0.050 Sum_probs=64.9
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEecCCCC--CcHHHHHHHHhhCCCCCCceEe
Q 027701 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 137 ~~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~~~--pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
...++||+.|+|+ .++++++|+||++...++.+|++ +++.. +|+.|++.+.. .||. +.++++.++.++++++|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 4678999999999 77899999999999999999995 99964 56988887632 5665 88999999999999987
Q ss_pred ccCC
Q 027701 212 STCN 215 (220)
Q Consensus 212 ~~~~ 215 (220)
=--+
T Consensus 121 i~Ds 124 (148)
T smart00577 121 IDDS 124 (148)
T ss_pred EECC
Confidence 5433
No 75
>PRK06769 hypothetical protein; Validated
Probab=98.72 E-value=2.2e-08 Score=81.20 Aligned_cols=77 Identities=14% Similarity=0.002 Sum_probs=59.7
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH--------HHHHHHHHhhCCCCCCceEe-cCC----CCCcHHHHHHHHhh
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLG----TGPKVNVLKQLQKK 201 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~--------~a~~iL~~~~gl~~~f~~v~-G~~----~~pkp~~l~~~l~~ 201 (220)
.++||||.++|+ ++|++++|+|||+.. .+...++. +|++.+|..+. +++ .||+|+++++++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 478999999999 789999999999852 23445774 88876554332 222 46999999999999
Q ss_pred CCCCCCceEeccCC
Q 027701 202 PEHQGLRLQRSTCN 215 (220)
Q Consensus 202 ~~~~~~~~~~~~~~ 215 (220)
++.++++++|=-.+
T Consensus 106 l~~~p~~~i~IGD~ 119 (173)
T PRK06769 106 HGLDLTQCAVIGDR 119 (173)
T ss_pred cCCCHHHeEEEcCC
Confidence 99999999986543
No 76
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.62 E-value=2.9e-07 Score=78.34 Aligned_cols=49 Identities=20% Similarity=0.375 Sum_probs=44.2
Q ss_pred CCCCCccHHHHHH-----hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecC
Q 027701 137 ANRLYPGVSDALK-----LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 137 ~~~lypGv~elL~-----~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
..++-||+.++++ ..|+.+.|+|.-..-+++.+|++ +|+...|+.|+..
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TN 122 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTN 122 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeC
Confidence 4688999999999 36999999999999999999995 9999999888875
No 77
>PRK08238 hypothetical protein; Validated
Probab=98.53 E-value=1.7e-06 Score=80.90 Aligned_cols=45 Identities=18% Similarity=0.321 Sum_probs=41.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (220)
+++||+.++|+ ++|++++|+||+++..++.++++ +|+ |+.++|++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd 119 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASD 119 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCC
Confidence 57799999999 89999999999999999999994 987 89999886
No 78
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.50 E-value=7.2e-07 Score=77.36 Aligned_cols=67 Identities=18% Similarity=0.171 Sum_probs=52.1
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCch---HHHHHHHHHhhCCCC-CCceEecCCC-CCcHHHHHHHHhhCCC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGT-GPKVNVLKQLQKKPEH 204 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~---~~a~~iL~~~~gl~~-~f~~v~G~~~-~pkp~~l~~~l~~~~~ 204 (220)
...++||+.++|+ ++|++++|+||+++ +.+...|++ +|+.. .++.|+..+. .+|+.....+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE
Confidence 4679999999999 89999999999884 456688885 99974 4566766543 4888888888776554
No 79
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.50 E-value=5.4e-08 Score=83.80 Aligned_cols=76 Identities=8% Similarity=-0.068 Sum_probs=63.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC-------CCCcHHHHHHHHhhCCCCCCc
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLR 208 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-------~~pkp~~l~~~l~~~~~~~~~ 208 (220)
-.|+++.+++. +.+++++|+|||+..+....+. ++|+..+|+.+.+.. .||+|+++..++++++.++++
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~-~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~ 198 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGL-ALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEE 198 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCC-CCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhh
Confidence 45899999888 6788999999999998887887 488888888776542 269999999999999999999
Q ss_pred eEeccCC
Q 027701 209 LQRSTCN 215 (220)
Q Consensus 209 ~~~~~~~ 215 (220)
++|=-.+
T Consensus 199 ~~~vGD~ 205 (257)
T TIGR01458 199 AVMIGDD 205 (257)
T ss_pred EEEECCC
Confidence 9986544
No 80
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.43 E-value=4e-07 Score=79.40 Aligned_cols=74 Identities=19% Similarity=0.064 Sum_probs=65.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEecCC----------C-CCcHHHHHHHHhhC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------T-GPKVNVLKQLQKKP 202 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~----------~-~pkp~~l~~~l~~~ 202 (220)
..+|||+.++|+ ++|++++|+|||+...++.+++. +|+.. +|+.++|.+ . +|+|++++++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 579999999999 88999999999999999999995 99996 999999976 2 49999999999998
Q ss_pred CC-CCCceEec
Q 027701 203 EH-QGLRLQRS 212 (220)
Q Consensus 203 ~~-~~~~~~~~ 212 (220)
+. .+++++|=
T Consensus 265 ~~~~~~~~~~v 275 (300)
T PHA02530 265 IAPKYDVLLAV 275 (300)
T ss_pred hccCceEEEEE
Confidence 87 46777764
No 81
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.43 E-value=8.5e-07 Score=79.84 Aligned_cols=75 Identities=16% Similarity=0.203 Sum_probs=61.7
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCceE-ecC----C----
Q 027701 135 IGANRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----G---- 187 (220)
Q Consensus 135 ~~~~~lypGv~elL~---~~g~~l~I~TnK---------------~~~~a~~iL~~~~gl~~~f~~v-~G~----~---- 187 (220)
....++||||.++|+ ++|++++|+||| +...+..++++ +|+. |+.+ ++. +
T Consensus 26 ~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~~ 102 (354)
T PRK05446 26 LDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCSC 102 (354)
T ss_pred cccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCCC
Confidence 446799999999999 789999999997 46778889995 8884 5544 442 2
Q ss_pred CCCcHHHHHHHHhhCCCCCCceEec
Q 027701 188 TGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 188 ~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
.||+|+++.+++++++..+++++|=
T Consensus 103 rKP~p~~l~~a~~~l~v~~~~svmI 127 (354)
T PRK05446 103 RKPKTGLVEEYLAEGAIDLANSYVI 127 (354)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEE
Confidence 3599999999999999999999884
No 82
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.42 E-value=7.2e-07 Score=72.13 Aligned_cols=72 Identities=15% Similarity=0.284 Sum_probs=60.4
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~-~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
..+|||+.++|+ ++|++++|+||++ ...++.++++ +|+..++ ...||+|+++..++++++.++++++|=-
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 7888888884 8875432 2347999999999999999999998854
Q ss_pred CC
Q 027701 214 CN 215 (220)
Q Consensus 214 ~~ 215 (220)
-+
T Consensus 116 Ds 117 (170)
T TIGR01668 116 DR 117 (170)
T ss_pred Cc
Confidence 43
No 83
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.25 E-value=1.5e-06 Score=70.59 Aligned_cols=62 Identities=16% Similarity=0.110 Sum_probs=53.9
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 146 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 146 elL~~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
.+|+++|++++|+|||++..++.++++ +|+..+|+.+ +|||+++..++++++.++++++|--
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iG 105 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVG 105 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEEC
Confidence 344478999999999999999999995 9999888743 6999999999999999999988743
No 84
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.23 E-value=7.5e-07 Score=77.38 Aligned_cols=74 Identities=11% Similarity=0.067 Sum_probs=55.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHH-HHHHHHhhCCCCCCceEe---cCC----CCCcHHHHHHHHhhCCCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFV-ETLLRELAGVTITPDRLY---GLG----TGPKVNVLKQLQKKPEHQGL 207 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a-~~iL~~~~gl~~~f~~v~---G~~----~~pkp~~l~~~l~~~~~~~~ 207 (220)
--|+|+.++|+ ++|+ ++|+|||+.... ...+. ..|+..+|+.+. |.+ .||+|+++..++++++.+++
T Consensus 143 ~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~-~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~ 220 (279)
T TIGR01452 143 FSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSR-TPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPA 220 (279)
T ss_pred CCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCc-ccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChh
Confidence 35999999999 4676 899999997554 22334 256666666654 333 25999999999999999999
Q ss_pred ceEeccC
Q 027701 208 RLQRSTC 214 (220)
Q Consensus 208 ~~~~~~~ 214 (220)
+++|=--
T Consensus 221 ~~lmIGD 227 (279)
T TIGR01452 221 RTLMVGD 227 (279)
T ss_pred hEEEECC
Confidence 9998543
No 85
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.21 E-value=3.4e-06 Score=72.14 Aligned_cols=71 Identities=11% Similarity=0.044 Sum_probs=47.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCc-----hHHHHHHHHHhhCCCC------CCceEecCCCCCcHHHHHHHHhhCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQ-----SRFVETLLRELAGVTI------TPDRLYGLGTGPKVNVLKQLQKKPEH 204 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~-----~~~a~~iL~~~~gl~~------~f~~v~G~~~~pkp~~l~~~l~~~~~ 204 (220)
..|+++.++++ ..+..+.|+|+++ +...+.++++ +++.. +++.+..+ ..|+..++++++.+|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~--~~K~~~l~~l~~~~gi 213 (272)
T PRK10530 137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKG--NSKGKRLTQWVEAQGW 213 (272)
T ss_pred cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCC--CChHHHHHHHHHHcCC
Confidence 34778888776 4566777888765 4556666663 66541 12222111 1689999999999999
Q ss_pred CCCceEec
Q 027701 205 QGLRLQRS 212 (220)
Q Consensus 205 ~~~~~~~~ 212 (220)
+++++++=
T Consensus 214 ~~~e~i~~ 221 (272)
T PRK10530 214 SMKNVVAF 221 (272)
T ss_pred CHHHeEEe
Confidence 99888764
No 86
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.18 E-value=9e-06 Score=60.75 Aligned_cols=79 Identities=24% Similarity=0.195 Sum_probs=68.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC----C----------------CCcHH
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG----T----------------GPKVN 193 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~----~----------------~pkp~ 193 (220)
..+++||+.++|+ ++|++++|+||.....++..++. +|+..+|+.+++.. . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 4689999999999 77999999999999999999996 99988888888754 1 68899
Q ss_pred HHHHHHhhCCCCCCceEeccCCC
Q 027701 194 VLKQLQKKPEHQGLRLQRSTCNP 216 (220)
Q Consensus 194 ~l~~~l~~~~~~~~~~~~~~~~~ 216 (220)
.+..+++.++.++++++|-.-++
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~ 123 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSL 123 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCH
Confidence 99999999999888888865444
No 87
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.16 E-value=3.2e-06 Score=71.82 Aligned_cols=74 Identities=18% Similarity=0.341 Sum_probs=58.8
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHH--HHHHHhhCCCC-CCceEecCCCCCcHHHHHHHHhhCCCCCCce
Q 027701 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 209 (220)
Q Consensus 136 ~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~--~iL~~~~gl~~-~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~ 209 (220)
....+|||+.++|+ ++|++++|+|||++.... ..|++ +|+.. +|+.|+++... ..+.+..++++++.++.++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~-~~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEI-AVQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHH-HHHHHHhhhhhccCCCceE
Confidence 35689999999999 789999999999998876 78895 99997 99999997631 1256667777777766666
Q ss_pred Ee
Q 027701 210 QR 211 (220)
Q Consensus 210 ~~ 211 (220)
++
T Consensus 99 ~~ 100 (242)
T TIGR01459 99 YL 100 (242)
T ss_pred EE
Confidence 55
No 88
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.14 E-value=6.1e-05 Score=63.17 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=61.9
Q ss_pred CCCCccHHHHHH-hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCC----------CCcHHHHHHHHhhCCCC-
Q 027701 138 NRLYPGVSDALK-LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT----------GPKVNVLKQLQKKPEHQ- 205 (220)
Q Consensus 138 ~~lypGv~elL~-~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~----------~pkp~~l~~~l~~~~~~- 205 (220)
.+|=|-.+++|- -+..+..|.||.....|.++|+. +||...|+.|++-+. ||.++....+++..|+.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 466677778887 23333899999999999999995 999999999988641 38899999999999999
Q ss_pred CCceEec
Q 027701 206 GLRLQRS 212 (220)
Q Consensus 206 ~~~~~~~ 212 (220)
+.+++|=
T Consensus 178 p~~t~Ff 184 (244)
T KOG3109|consen 178 PRNTYFF 184 (244)
T ss_pred cCceEEE
Confidence 9999884
No 89
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.13 E-value=2.4e-05 Score=63.03 Aligned_cols=68 Identities=19% Similarity=0.335 Sum_probs=49.0
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC-------------CCC----cHHHHHHH---
Q 027701 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------------TGP----KVNVLKQL--- 198 (220)
Q Consensus 142 pGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-------------~~p----kp~~l~~~--- 198 (220)
|++.++|+ ++|+++.|+|+.+...++.+++. +|+...+ ++|.. ... |...+.++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44459998 88999999999999999999995 9987422 22211 011 88888888
Q ss_pred HhhCCCCCCceEecc
Q 027701 199 QKKPEHQGLRLQRST 213 (220)
Q Consensus 199 l~~~~~~~~~~~~~~ 213 (220)
... +....+++|-.
T Consensus 169 ~~~-~~~~~~~~~iG 182 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIG 182 (192)
T ss_dssp HHH-THTCCEEEEEE
T ss_pred hhc-CCCCCeEEEEE
Confidence 554 66677776644
No 90
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.08 E-value=6e-06 Score=65.67 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=54.9
Q ss_pred HHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEecc
Q 027701 144 VSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 144 v~elL~~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
+.+.|+++|++++|+|||+...+..++++ +|+..+|+. .+|||+++.+++++++.++++++|-.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vG 99 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIG 99 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEEC
Confidence 44555588999999999999999999995 999877752 25899999999999999999998864
No 91
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.01 E-value=7.9e-06 Score=73.25 Aligned_cols=55 Identities=11% Similarity=0.056 Sum_probs=48.3
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh-C-------CCCCCceEecCCCCC
Q 027701 135 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA-G-------VTITPDRLYGLGTGP 190 (220)
Q Consensus 135 ~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~-g-------l~~~f~~v~G~~~~p 190 (220)
.....++||+.++|+ ++|++++|+|||+...++.+|+. + | |..+||.|+++..||
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP 245 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKP 245 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCC
Confidence 345677999999999 88999999999999999999995 6 7 899999999987543
No 92
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.99 E-value=1.7e-05 Score=68.58 Aligned_cols=36 Identities=22% Similarity=0.063 Sum_probs=30.0
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecC
Q 027701 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 150 ~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
++|++++|+|+++...+..++++ +|+..++-...|+
T Consensus 35 ~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~~nGa 70 (273)
T PRK00192 35 EKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIVENGA 70 (273)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEEEcCc
Confidence 57899999999999999999995 9988666555554
No 93
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.95 E-value=2.5e-05 Score=65.52 Aligned_cols=48 Identities=23% Similarity=0.358 Sum_probs=42.3
Q ss_pred CCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCCCCCCceEecC
Q 027701 138 NRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 138 ~~lypGv~elL~---~~g-~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
.+.-||+.++++ +.| +.+.|+|-...-|++.+|++ +|+...|+.|+..
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTN 134 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTN 134 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcC
Confidence 577899999999 555 48999999999999999995 9999999988765
No 94
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.86 E-value=2.4e-05 Score=68.57 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=42.9
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC
Q 027701 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (220)
Q Consensus 141 ypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (220)
=||+.|+|+ ++|++++|+||++++.+...|++ +|++.+|+.|++++
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~G 196 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGG 196 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECC
Confidence 399999999 88999999999999999999995 99999999998875
No 95
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.72 E-value=7.4e-05 Score=61.05 Aligned_cols=59 Identities=20% Similarity=0.227 Sum_probs=51.6
Q ss_pred HHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEec
Q 027701 148 LKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 148 L~~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
|+++|++++|+||++...++.++++ +|+..+|+ |. ++|++.+.+++++++.++++++|=
T Consensus 60 L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~--~~k~~~l~~~~~~~gl~~~ev~~V 118 (183)
T PRK09484 60 LLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQ--SNKLIAFSDLLEKLAIAPEQVAYI 118 (183)
T ss_pred HHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CC--CcHHHHHHHHHHHhCCCHHHEEEE
Confidence 3478999999999999999999995 99987775 32 378999999999999999999884
No 96
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.68 E-value=7.2e-05 Score=65.64 Aligned_cols=46 Identities=20% Similarity=0.105 Sum_probs=42.6
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC
Q 027701 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (220)
Q Consensus 141 ypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (220)
=|||.++|+ ++|++++|+|||+++.+..+|++ +|+..+|+.|+|++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECC
Confidence 499999999 88999999999999999999995 99999999888875
No 97
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.66 E-value=9e-05 Score=60.76 Aligned_cols=54 Identities=17% Similarity=0.150 Sum_probs=35.2
Q ss_pred cccCCCCCccHHHHHH---hCCCcEEEEcCCch-------HHHHHHHHHhhCCCCCCceEecCC
Q 027701 134 WIGANRLYPGVSDALK---LASSRIYIVTSNQS-------RFVETLLRELAGVTITPDRLYGLG 187 (220)
Q Consensus 134 ~~~~~~lypGv~elL~---~~g~~l~I~TnK~~-------~~a~~iL~~~~gl~~~f~~v~G~~ 187 (220)
.....+|+||+.|+|+ +.|..+.++|+.+. +....-|++|||...+-..+++.+
T Consensus 68 ~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~ 131 (191)
T PF06941_consen 68 FFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD 131 (191)
T ss_dssp TTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS
T ss_pred hhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC
Confidence 3446789999999999 77877777777553 466778887666544455666654
No 98
>PLN02645 phosphoglycolate phosphatase
Probab=97.66 E-value=3.4e-05 Score=68.19 Aligned_cols=63 Identities=13% Similarity=0.100 Sum_probs=48.0
Q ss_pred CCcEEEEcCCchHH-HHHHHHHhhCCCCCCceEecCC-------CCCcHHHHHHHHhhCCCCCCceEeccCC
Q 027701 152 SSRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLG-------TGPKVNVLKQLQKKPEHQGLRLQRSTCN 215 (220)
Q Consensus 152 g~~l~I~TnK~~~~-a~~iL~~~~gl~~~f~~v~G~~-------~~pkp~~l~~~l~~~~~~~~~~~~~~~~ 215 (220)
+-.++|+|||+... ....+. +.|+..+|+.+.+.. .||+|.++..++++++.++++++|=--+
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~-~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~ 256 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQE-WAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDR 256 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCC-ccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCC
Confidence 34689999999854 334445 367777888887653 1699999999999999999999985443
No 99
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.64 E-value=7.1e-05 Score=60.05 Aligned_cols=69 Identities=22% Similarity=0.248 Sum_probs=45.8
Q ss_pred CCccHHHHHH---hCCCcEEEEcCC---ch-----------HHHHHHHHHhhCCCCCCceEecCC----CCCcHHHHHHH
Q 027701 140 LYPGVSDALK---LASSRIYIVTSN---QS-----------RFVETLLRELAGVTITPDRLYGLG----TGPKVNVLKQL 198 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK---~~-----------~~a~~iL~~~~gl~~~f~~v~G~~----~~pkp~~l~~~ 198 (220)
++|||.+.|. +.|+.++|+||- .. .-.+.+++. +|+. +.+.+... .||.+-|+..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 4578999999 899999999995 22 334566774 6665 33333322 45999999999
Q ss_pred HhhCCC----CCCceEe
Q 027701 199 QKKPEH----QGLRLQR 211 (220)
Q Consensus 199 l~~~~~----~~~~~~~ 211 (220)
+++++. .-++.+|
T Consensus 107 ~~~~~~~~~id~~~Sf~ 123 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFY 123 (159)
T ss_dssp CCCTSTT--S-CCC-EE
T ss_pred HHhccccccccccceEE
Confidence 999875 5555555
No 100
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.62 E-value=6.1e-05 Score=60.30 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=55.0
Q ss_pred cCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC-CCC-ceEecCCC--CCcHHHHHHHHhhCCCCCCce
Q 027701 136 GANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGT--GPKVNVLKQLQKKPEHQGLRL 209 (220)
Q Consensus 136 ~~~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~-~~f-~~v~G~~~--~pkp~~l~~~l~~~~~~~~~~ 209 (220)
..++++||+.++|+ .+++.++|+|||++..|..+++. ++.. .+| +.|+|.+. ++...-|..+ ++...+.+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~~i---~~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLLRL---FPADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHHHH---cCCCcccE
Confidence 35789999999999 77799999999999999999995 9988 588 77787653 2222122222 34455556
Q ss_pred EeccCCC
Q 027701 210 QRSTCNP 216 (220)
Q Consensus 210 ~~~~~~~ 216 (220)
+.--.+|
T Consensus 131 vivDd~~ 137 (156)
T TIGR02250 131 VIIDDRE 137 (156)
T ss_pred EEEeCCH
Confidence 5544444
No 101
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.58 E-value=0.0012 Score=57.60 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=56.5
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE------ecCC---C-CC--------cHHH-
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL------YGLG---T-GP--------KVNV- 194 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v------~G~~---~-~p--------kp~~- 194 (220)
..++.||+.++|+ ++|++++|+|+.....++.+|++ +|+...+..| +..+ . +| |.+.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 4689999999999 89999999999999999999996 9997666666 4222 1 13 3444
Q ss_pred HHHHHhhCC--CCCCceEe
Q 027701 195 LKQLQKKPE--HQGLRLQR 211 (220)
Q Consensus 195 l~~~l~~~~--~~~~~~~~ 211 (220)
+..+.+.++ .+++++++
T Consensus 198 ~~~~~~~~~~~~~~~~vI~ 216 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIIL 216 (277)
T ss_pred HHHHHHHhCccCCcceEEE
Confidence 445777777 66777765
No 102
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.57 E-value=0.00025 Score=57.61 Aligned_cols=74 Identities=16% Similarity=0.239 Sum_probs=51.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEc-CCchHHHHHHHHHhhCCC----------CCCceEecCCCCCcHHHHHHHHhhC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVNVLKQLQKKP 202 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~T-nK~~~~a~~iL~~~~gl~----------~~f~~v~G~~~~pkp~~l~~~l~~~ 202 (220)
..++||+|.++|+ .+|+++|||| +...+-|+.+|+. +++. .+|+.+-=. ...|..-+.++.+..
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~~~t 120 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIHRKT 120 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHHHhc
Confidence 4689999999999 8999999999 4556799999995 9999 777764111 227888999999999
Q ss_pred CCCCCceEec
Q 027701 203 EHQGLRLQRS 212 (220)
Q Consensus 203 ~~~~~~~~~~ 212 (220)
|++.++++|=
T Consensus 121 gI~y~eMlFF 130 (169)
T PF12689_consen 121 GIPYEEMLFF 130 (169)
T ss_dssp ---GGGEEEE
T ss_pred CCChhHEEEe
Confidence 9999999983
No 103
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.49 E-value=0.00029 Score=60.34 Aligned_cols=28 Identities=14% Similarity=0.110 Sum_probs=24.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 027701 150 LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (220)
Q Consensus 150 ~~g~~l~I~TnK~~~~a~~iL~~~~gl~~ 178 (220)
++|++++|+|+.+...+..+++. +|++.
T Consensus 34 ~~G~~~~iaTGR~~~~~~~~~~~-l~~~~ 61 (270)
T PRK10513 34 AKGVNVVLTTGRPYAGVHRYLKE-LHMEQ 61 (270)
T ss_pred HCCCEEEEecCCChHHHHHHHHH-hCCCC
Confidence 57889999999999999999995 88764
No 104
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=97.32 E-value=0.00016 Score=58.08 Aligned_cols=79 Identities=10% Similarity=-0.044 Sum_probs=62.8
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCC-CCceEecCCCC--CcHHHHHHHHhhCCCCCCceEec
Q 027701 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 138 ~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~~-~f~~v~G~~~~--pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
...=||+.|+|+ .+.+.++|.|++++..|+.++++ ++... +|+.+++.++. .++. +.+.+..+|.+++++++=
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEE
Confidence 345699999999 56699999999999999999995 98775 88988887642 2222 567788888899999987
Q ss_pred cCCCCC
Q 027701 213 TCNPEE 218 (220)
Q Consensus 213 ~~~~~~ 218 (220)
--+|..
T Consensus 119 DD~~~~ 124 (162)
T TIGR02251 119 DNSPYS 124 (162)
T ss_pred eCChhh
Confidence 766654
No 105
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.27 E-value=7.2e-05 Score=63.56 Aligned_cols=72 Identities=8% Similarity=0.014 Sum_probs=59.0
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceE--ecCC----CCCcHHHHHHHHhhCCCC-CCce
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLG----TGPKVNVLKQLQKKPEHQ-GLRL 209 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v--~G~~----~~pkp~~l~~~l~~~~~~-~~~~ 209 (220)
-|||+.++|+ ++|+++ |+|||+.......+.+ +|...+|..+ +|.+ .||+|+++..++++++.. ++++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3899999998 679997 9999999999888884 8888788766 5654 259999999999999875 5678
Q ss_pred Eecc
Q 027701 210 QRST 213 (220)
Q Consensus 210 ~~~~ 213 (220)
+|=-
T Consensus 217 ~~vG 220 (242)
T TIGR01459 217 LMVG 220 (242)
T ss_pred EEEC
Confidence 7743
No 106
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=97.24 E-value=0.0045 Score=50.84 Aligned_cols=90 Identities=18% Similarity=0.206 Sum_probs=64.7
Q ss_pred HhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhh---C----CCCCCceEecCCCCCcHHHH
Q 027701 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELA---G----VTITPDRLYGLGTGPKVNVL 195 (220)
Q Consensus 126 y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~---g----l~~~f~~v~G~~~~pkp~~l 195 (220)
|..-|+.+-+ ...+||.+.+.|+ ++|+++.|-||-+-..-+-+.. |. . ++.|||.-+|.. .....-
T Consensus 91 Wa~Gy~sgel-kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fg-hs~agdL~~lfsGyfDttiG~K--rE~~SY 166 (229)
T COG4229 91 WAHGYESGEL-KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFG-HSDAGDLNSLFSGYFDTTIGKK--RESQSY 166 (229)
T ss_pred HHhccccCcc-ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhc-ccccccHHhhhcceeecccccc--ccchhH
Confidence 4444555544 5689999999999 8999999999987665444433 22 1 235566554432 334567
Q ss_pred HHHHhhCCCCCCceEeccCCCCCC
Q 027701 196 KQLQKKPEHQGLRLQRSTCNPEEC 219 (220)
Q Consensus 196 ~~~l~~~~~~~~~~~~~~~~~~~~ 219 (220)
.++....|.+|.+++|-+-||+|-
T Consensus 167 ~kIa~~iGl~p~eilFLSDn~~EL 190 (229)
T COG4229 167 AKIAGDIGLPPAEILFLSDNPEEL 190 (229)
T ss_pred HHHHHhcCCCchheEEecCCHHHH
Confidence 789999999999999999999984
No 107
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.13 E-value=0.00024 Score=60.86 Aligned_cols=77 Identities=12% Similarity=0.071 Sum_probs=47.7
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHH--HH-HHhhCCCCCCceEecCC----CCCcHHHHHHHHhhCCCCCCc
Q 027701 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLG----TGPKVNVLKQLQKKPEHQGLR 208 (220)
Q Consensus 138 ~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~--iL-~~~~gl~~~f~~v~G~~----~~pkp~~l~~~l~~~~~~~~~ 208 (220)
.-.|+-+...+. ++|.+ .|+||.....-.. ++ .. -.+...+..+.|.+ .||+|+++..+++.++.++++
T Consensus 120 ~~~y~~l~~a~~~l~~g~~-~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~ 197 (249)
T TIGR01457 120 QIDYEKFATATLAIRKGAH-FIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREE 197 (249)
T ss_pred CCCHHHHHHHHHHHHCCCe-EEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCccc
Confidence 346777777776 67776 8889865533211 00 00 00111223333433 269999999999999999999
Q ss_pred eEeccCCC
Q 027701 209 LQRSTCNP 216 (220)
Q Consensus 209 ~~~~~~~~ 216 (220)
++|=.-++
T Consensus 198 ~~~VGD~~ 205 (249)
T TIGR01457 198 TLMVGDNY 205 (249)
T ss_pred EEEECCCc
Confidence 99865443
No 108
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.10 E-value=0.028 Score=46.65 Aligned_cols=72 Identities=18% Similarity=0.402 Sum_probs=54.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC--C------Cc---eEecCC-------CCCcHHHH
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI--T------PD---RLYGLG-------TGPKVNVL 195 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~--~------f~---~v~G~~-------~~pkp~~l 195 (220)
..++=|||+|+.. ++|.+++++|+--..++..+-.+ +||+. . |+ -..|.+ +..|+++|
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 4678899999999 99999999999999999999996 99974 1 11 122212 23789999
Q ss_pred HHHHhhCCCCCCceEe
Q 027701 196 KQLQKKPEHQGLRLQR 211 (220)
Q Consensus 196 ~~~l~~~~~~~~~~~~ 211 (220)
..+.+ +.+-..++|
T Consensus 165 ~~lrk--~~~~~~~~m 178 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVM 178 (227)
T ss_pred HHHHh--CCChheeEE
Confidence 98888 555555444
No 109
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=97.09 E-value=0.0019 Score=52.07 Aligned_cols=67 Identities=16% Similarity=0.169 Sum_probs=55.4
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEec
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
.=|.+.+-++ ++|+++.|+||+.+.-+...+++ +|+. +|.++ .||-+..+.+++++++.++.+++|-
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmV 116 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMV 116 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEE
Confidence 3466666666 89999999999999999999995 9874 45443 3699999999999999999999873
No 110
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.06 E-value=0.0058 Score=50.73 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=46.4
Q ss_pred hCCCcEEE-EcCCchHHHHHHHHHhhCCC----CCCceEecCCCCCcHHHHHHHHhhCCCCCCceEeccCC
Q 027701 150 LASSRIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQRSTCN 215 (220)
Q Consensus 150 ~~g~~l~I-~TnK~~~~a~~iL~~~~gl~----~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~~~~~ 215 (220)
..++.+.+ .|++....+...+++ .|+. .+|..|.+.+. .|+..+.++++.+|.+++++++--.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~ 204 (221)
T TIGR02463 136 EASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDG 204 (221)
T ss_pred cCCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCC
Confidence 34555566 677888888888885 7776 45555555443 57889999999999999998875443
No 111
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.98 E-value=0.0016 Score=57.36 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=21.0
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 027701 150 LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (220)
Q Consensus 150 ~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~ 179 (220)
++|++++++|+|....+..+.+. +|+..+
T Consensus 32 ~~GI~vVlaTGRt~~ev~~l~~~-Lgl~~p 60 (302)
T PRK12702 32 RRSIPLVLYSLRTRAQLEHLCRQ-LRLEHP 60 (302)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHH-hCCCCe
Confidence 46777788888887777777775 777543
No 112
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=96.93 E-value=0.013 Score=55.33 Aligned_cols=59 Identities=17% Similarity=0.271 Sum_probs=42.6
Q ss_pred cCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 109 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 109 g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
|++.+++++...++...|.. ..++|...+.+++.|.. +|+|.-++..++.+++.++|++
T Consensus 89 G~~~~el~~~~r~~l~~f~~---------~~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 89 GLKIRDIELVSRSVLPKFYA---------EDVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CCCHHHHHHHHHHHHHHHHH---------HhcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC
Confidence 77788776666555554432 23788888877766654 9999999999999997447875
No 113
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=96.91 E-value=0.00052 Score=57.20 Aligned_cols=56 Identities=18% Similarity=0.076 Sum_probs=39.7
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC------CC-CcHHHHHHHHhhCCCCCCceEec
Q 027701 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------TG-PKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 154 ~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------~~-pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
.+.+.++++.+.+..++++ ++.. +..+.+.. .+ .|+..+.++++.++.+++++++-
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 4566777887888888885 6642 33333322 11 78999999999999998888763
No 114
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.88 E-value=0.00056 Score=58.79 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=25.3
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
|+|+++|||||||+++-..|......+++++
T Consensus 1 m~kli~~DlDGTLl~~~~~i~~~~~~ai~~l 31 (272)
T PRK15126 1 MARLAAFDMDGTLLMPDHHLGEKTLSTLARL 31 (272)
T ss_pred CccEEEEeCCCcCcCCCCcCCHHHHHHHHHH
Confidence 8899999999999998666666666666666
No 115
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=96.88 E-value=0.0018 Score=61.64 Aligned_cols=69 Identities=20% Similarity=0.306 Sum_probs=52.9
Q ss_pred ccCCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceE
Q 027701 135 IGANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 135 ~~~~~lypGv~elL~---~~g-~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~ 210 (220)
.....+|||+.++|+ ++| ++++|+||+++..++.++++ +|++.+|..+.. .+|++.+.++.+ .+.+++
T Consensus 380 ~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~~p---~~K~~~v~~l~~----~~~~v~ 451 (556)
T TIGR01525 380 ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAELLP---EDKLAIVKELQE----EGGVVA 451 (556)
T ss_pred EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccCCH---HHHHHHHHHHHH----cCCEEE
Confidence 335689999999999 789 99999999999999999995 999887765421 256666665544 344555
Q ss_pred e
Q 027701 211 R 211 (220)
Q Consensus 211 ~ 211 (220)
|
T Consensus 452 ~ 452 (556)
T TIGR01525 452 M 452 (556)
T ss_pred E
Confidence 5
No 116
>PRK10976 putative hydrolase; Provisional
Probab=96.81 E-value=0.00067 Score=58.01 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=25.4
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
|+|+|+||+||||+|+-..|......+++++
T Consensus 1 mikli~~DlDGTLl~~~~~is~~~~~ai~~l 31 (266)
T PRK10976 1 MYQVVASDLDGTLLSPDHTLSPYAKETLKLL 31 (266)
T ss_pred CceEEEEeCCCCCcCCCCcCCHHHHHHHHHH
Confidence 7899999999999998766766666666666
No 117
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.78 E-value=0.0021 Score=61.03 Aligned_cols=69 Identities=16% Similarity=0.282 Sum_probs=52.9
Q ss_pred ccCCCCCccHHHHHH---hCCC-cEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceE
Q 027701 135 IGANRLYPGVSDALK---LASS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 135 ~~~~~lypGv~elL~---~~g~-~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~ 210 (220)
....++|||+.++|+ ++|+ +++|+||+++..++.++++ +|++.+|..+.. .+|++.+.++.+ +..+++
T Consensus 358 ~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~p---~~K~~~i~~l~~----~~~~v~ 429 (536)
T TIGR01512 358 LLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELLP---EDKLEIVKELRE----KYGPVA 429 (536)
T ss_pred EEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccCc---HHHHHHHHHHHh----cCCEEE
Confidence 345689999999999 8899 9999999999999999995 999888764421 256665555543 335555
Q ss_pred e
Q 027701 211 R 211 (220)
Q Consensus 211 ~ 211 (220)
|
T Consensus 430 ~ 430 (536)
T TIGR01512 430 M 430 (536)
T ss_pred E
Confidence 5
No 118
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.76 E-value=0.0059 Score=51.91 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=36.0
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTIT 179 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~---a~~iL~~~~gl~~~ 179 (220)
.+++.||+.++++ ++|+++.++|+.++.. +..-|.+ .|+..+
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~ 165 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW 165 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc
Confidence 4688999999999 8999999999999877 7777875 888765
No 119
>PTZ00174 phosphomannomutase; Provisional
Probab=96.66 E-value=0.00097 Score=56.86 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=25.1
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
|+|+|||||||+|+-..|......+++++
T Consensus 6 klia~DlDGTLL~~~~~is~~~~~ai~~l 34 (247)
T PTZ00174 6 TILLFDVDGTLTKPRNPITQEMKDTLAKL 34 (247)
T ss_pred eEEEEECcCCCcCCCCCCCHHHHHHHHHH
Confidence 89999999999999887777777777776
No 120
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.50 E-value=0.023 Score=46.82 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=34.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG 175 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~g 175 (220)
..++=||..|..+ ++++++.|+|+--..++.+++++ ++
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-iv 111 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IV 111 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hc
Confidence 4678899999999 89999999999999999999996 65
No 121
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.38 E-value=0.017 Score=50.23 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=34.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhhCCCCCCceEe
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY 184 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~---~a~~iL~~~~gl~~~f~~v~ 184 (220)
..++.||+.++++ ++|+++.++||.++. .+..-|.+ .|+..+-..+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~~~LiL 195 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTWEKLIL 195 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCcceeee
Confidence 5678999999999 899999999999864 45555664 67764433333
No 122
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.33 E-value=0.0024 Score=52.93 Aligned_cols=59 Identities=10% Similarity=0.027 Sum_probs=39.6
Q ss_pred CcEEEEcCCchHHHHHHHHHhhCCCCCCc---eEecCCCCCcHHHHHHHHhhCCCCCCceEec
Q 027701 153 SRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLGTGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 153 ~~l~I~TnK~~~~a~~iL~~~~gl~~~f~---~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
..+.+++++....+...++. .|+..++. .-+......|...+..+++.++.+.+++++-
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~i 169 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAI 169 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 34567788888888888884 77643211 0111111278889999999999998887753
No 123
>COG4996 Predicted phosphatase [General function prediction only]
Probab=96.33 E-value=0.012 Score=45.83 Aligned_cols=75 Identities=16% Similarity=0.053 Sum_probs=61.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhC------CCCCC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP------EHQGL 207 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~------~~~~~ 207 (220)
...+||.|.++|+ ..|+-++.+|=+-..-|-+.|+. +++..||..++-....-|-.|+.+++.+. .++|+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 4689999999999 88999999999999999999996 99999999988754334557777777664 45688
Q ss_pred ceEec
Q 027701 208 RLQRS 212 (220)
Q Consensus 208 ~~~~~ 212 (220)
+++|-
T Consensus 118 ~Ivy~ 122 (164)
T COG4996 118 EIVYL 122 (164)
T ss_pred eEEEE
Confidence 88874
No 124
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.32 E-value=0.0021 Score=54.91 Aligned_cols=31 Identities=29% Similarity=0.334 Sum_probs=28.0
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
|+|+|+||+||||+++-..|......+++++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~ 32 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARL 32 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHH
Confidence 5699999999999999999998888888866
No 125
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.32 E-value=0.021 Score=46.86 Aligned_cols=71 Identities=25% Similarity=0.243 Sum_probs=54.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCC---------------chHHHHHHHHHhhCCCCCCceE-ecCC--------CCC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGLG--------TGP 190 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK---------------~~~~a~~iL~~~~gl~~~f~~v-~G~~--------~~p 190 (220)
..+.||+.+.|. +.|++++|+||. .+.....+|+. .|+ .|+.| ++.. .||
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRKP 106 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRKP 106 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccCC
Confidence 467999999999 899999999994 34455666774 676 34444 3432 359
Q ss_pred cHHHHHHHHhhCCCCCCceEe
Q 027701 191 KVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 191 kp~~l~~~l~~~~~~~~~~~~ 211 (220)
+|.++..++++++...++.++
T Consensus 107 ~~gm~~~~~~~~~iD~~~s~~ 127 (181)
T COG0241 107 KPGMLLSALKEYNIDLSRSYV 127 (181)
T ss_pred ChHHHHHHHHHhCCCccceEE
Confidence 999999999999988877765
No 126
>PLN02645 phosphoglycolate phosphatase
Probab=96.25 E-value=0.017 Score=51.07 Aligned_cols=74 Identities=22% Similarity=0.370 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHH---HHHhhCCCCCCceEec
Q 027701 112 REALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYG 185 (220)
Q Consensus 112 ~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~i---L~~~~gl~~~f~~v~G 185 (220)
.+.+.+++..|+-...+.+-.-|. ...+|||+.+.|+ ++|+++.++||++....+.+ |++ +|+...++.|++
T Consensus 18 ~~~~~~~~~~~~~~~~D~DGtl~~-~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~t 95 (311)
T PLN02645 18 LENADELIDSVETFIFDCDGVIWK-GDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFS 95 (311)
T ss_pred HHHHHHHHHhCCEEEEeCcCCeEe-CCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEee
Confidence 344445555555444443322222 3479999999998 88999999999994444444 363 899888888888
Q ss_pred CC
Q 027701 186 LG 187 (220)
Q Consensus 186 ~~ 187 (220)
+.
T Consensus 96 s~ 97 (311)
T PLN02645 96 SS 97 (311)
T ss_pred hH
Confidence 64
No 127
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=96.25 E-value=0.0045 Score=52.54 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=34.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH---HHHHHHHHhhCCCCCCceE
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSR---FVETLLRELAGVTITPDRL 183 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~---~a~~iL~~~~gl~~~f~~v 183 (220)
.++.||+.++++ ++|+++.++||.++. .+..-|++ .|+...-..+
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~ 164 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLI 164 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhc
Confidence 378899999999 999999999997755 55666774 7876433333
No 128
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.21 E-value=0.022 Score=47.91 Aligned_cols=17 Identities=24% Similarity=0.260 Sum_probs=13.1
Q ss_pred eEEEecCcccccChHHH
Q 027701 4 LYALDFDGVICDSCEET 20 (220)
Q Consensus 4 ~viFDlDGTLvDS~~~i 20 (220)
+|++||||||.|+-..+
T Consensus 1 li~~DlDgTLl~~~~~~ 17 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGL 17 (236)
T ss_pred CeEEeccccccCCHHHH
Confidence 47889999999865443
No 129
>PLN02423 phosphomannomutase
Probab=96.10 E-value=0.0031 Score=53.86 Aligned_cols=29 Identities=14% Similarity=0.193 Sum_probs=24.0
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
.+++||+||||+|+-..+-.....+++++
T Consensus 8 ~i~~~D~DGTLl~~~~~i~~~~~~ai~~l 36 (245)
T PLN02423 8 VIALFDVDGTLTAPRKEATPEMLEFMKEL 36 (245)
T ss_pred eEEEEeccCCCcCCCCcCCHHHHHHHHHH
Confidence 45669999999999888877777777777
No 130
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.06 E-value=0.0029 Score=52.38 Aligned_cols=56 Identities=13% Similarity=0.006 Sum_probs=37.8
Q ss_pred cEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC------C-CCcHHHHHHHHhhCCCCCCceEec
Q 027701 154 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------T-GPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 154 ~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------~-~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
...+.+....+.+..++++ ++... ..+.+.. . .+|...|.++++.++.+.+++++-
T Consensus 109 ~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~ 171 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKE-LGLNL--VAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVC 171 (225)
T ss_pred eEEEeecCCHHHHHHHHHh-cCceE--EEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 3456666667778888885 77531 1111111 1 288999999999999999888764
No 131
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.03 E-value=0.021 Score=54.66 Aligned_cols=65 Identities=15% Similarity=0.296 Sum_probs=49.6
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCC-CCcHHHHHHHHhhCCCCCCceEe
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-GPKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~-~pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
..+++||+.++|+ ++|++++|+||+++..++.++++ +|++ ++..-. .+|++.+.++.+ ++.+++|
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~----~~~~v~~ 471 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQE----KGRVVAM 471 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHH----cCCEEEE
Confidence 4579999999999 78999999999999999999995 9996 222222 266776666554 4456655
No 132
>PLN02887 hydrolase family protein
Probab=95.51 E-value=0.0083 Score=57.57 Aligned_cols=31 Identities=19% Similarity=0.181 Sum_probs=25.0
Q ss_pred CCceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 1 MEDLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
|+|+|+||+||||+|+-..|......|++++
T Consensus 307 ~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl 337 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKSQISETNAKALKEA 337 (580)
T ss_pred CccEEEEeCCCCCCCCCCccCHHHHHHHHHH
Confidence 4699999999999998766766666666666
No 133
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=95.28 E-value=0.19 Score=47.29 Aligned_cols=63 Identities=16% Similarity=0.193 Sum_probs=40.6
Q ss_pred cCCHHHHHHHHHHHHHHH-hhccccccccCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecC
Q 027701 109 SENREALIELSGKVRDEW-MDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 109 g~~~e~~~~~~~~~r~~y-~~~y~~~~~~~~~lypGv~elL~~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
|+..+++++.-.++-..| .+. +=|...+....+| +.+|+|.-|+-+++..++.++|. |.|+|.
T Consensus 75 Gl~~~die~vaRavlpkf~~~d----------v~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGT 138 (498)
T PLN02499 75 GVHESEIESVARAVLPKFYMDD----------VDMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGS 138 (498)
T ss_pred CCCHHHHHHHHHHHhhHHHHhh----------CCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEee
Confidence 777777766555554443 221 1122333334666 99999999999999999975776 455554
No 134
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.26 E-value=0.022 Score=43.75 Aligned_cols=14 Identities=14% Similarity=0.422 Sum_probs=13.2
Q ss_pred ceEEEecCcccccC
Q 027701 3 DLYALDFDGVICDS 16 (220)
Q Consensus 3 ~~viFDlDGTLvDS 16 (220)
|+++|||||||.+.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 68999999999998
No 135
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.25 E-value=0.011 Score=50.92 Aligned_cols=30 Identities=23% Similarity=0.060 Sum_probs=21.6
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
+++|++|+||||+|+-..+......+++++
T Consensus 7 ~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l 36 (271)
T PRK03669 7 PLLIFTDLDGTLLDSHTYDWQPAAPWLTRL 36 (271)
T ss_pred CeEEEEeCccCCcCCCCcCcHHHHHHHHHH
Confidence 378999999999998554544455555555
No 136
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.05 E-value=0.01 Score=49.04 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=21.4
Q ss_pred EEEecCcccccChHHHHHHHHHHHHHh
Q 027701 5 YALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 5 viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
|+|||||||+++-..|......+++++
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l 27 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKEL 27 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHH
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhh
Confidence 689999999998777666666666666
No 137
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.97 E-value=0.04 Score=40.69 Aligned_cols=48 Identities=25% Similarity=0.412 Sum_probs=31.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEec
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYG 185 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~---a~~iL~~~~gl~~~f~~v~G 185 (220)
..+++||+.|.|+ ++|+++.++||.+... ..+-|+. +|+..-.+.|+.
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~t 65 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIIT 65 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEEC
Confidence 3578999999999 8899999999987333 2233363 888755555554
No 138
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=94.91 E-value=0.014 Score=49.61 Aligned_cols=23 Identities=13% Similarity=-0.062 Sum_probs=20.2
Q ss_pred CcHHHHHHHHhhCCCCCCceEec
Q 027701 190 PKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 190 pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
.|...+..+++.++.+++++++-
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~ 210 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAF 210 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEe
Confidence 78999999999999998887764
No 139
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=94.78 E-value=0.017 Score=44.72 Aligned_cols=14 Identities=21% Similarity=0.335 Sum_probs=12.8
Q ss_pred ceEEEecCcccccC
Q 027701 3 DLYALDFDGVICDS 16 (220)
Q Consensus 3 ~~viFDlDGTLvDS 16 (220)
|+|+||+||||++.
T Consensus 2 K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 2 KRLVMDLDNTITLT 15 (126)
T ss_pred CEEEEeCCCCcccC
Confidence 79999999999975
No 140
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=94.71 E-value=0.016 Score=47.40 Aligned_cols=23 Identities=17% Similarity=0.063 Sum_probs=20.6
Q ss_pred CcHHHHHHHHhhCCCCCCceEec
Q 027701 190 PKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 190 pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
+|+..+..++++++.++.++++-
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~ 185 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAF 185 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEE
Confidence 89999999999999988888774
No 141
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.54 E-value=0.019 Score=45.81 Aligned_cols=14 Identities=36% Similarity=0.449 Sum_probs=12.6
Q ss_pred eEEEecCcccccCh
Q 027701 4 LYALDFDGVICDSC 17 (220)
Q Consensus 4 ~viFDlDGTLvDS~ 17 (220)
+|+||+||||++|-
T Consensus 1 iVisDIDGTL~~sd 14 (157)
T smart00775 1 IVISDIDGTITKSD 14 (157)
T ss_pred CEEEecCCCCcccc
Confidence 58999999999985
No 142
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=94.52 E-value=0.018 Score=46.97 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=13.9
Q ss_pred CceEEEecCcccccC
Q 027701 2 EDLYALDFDGVICDS 16 (220)
Q Consensus 2 ~~~viFDlDGTLvDS 16 (220)
+|+|+||+||||+|+
T Consensus 21 ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 21 IRLLICDVDGVFSDG 35 (183)
T ss_pred ceEEEEcCCeeeecC
Confidence 589999999999996
No 143
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=94.35 E-value=0.029 Score=49.80 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=22.1
Q ss_pred eEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 4 ~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
+|+||+||||+++-.- +..+..+++.+
T Consensus 2 ~~ifD~DGvL~~g~~~-i~ga~eal~~L 28 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKP-IAGASDALRRL 28 (321)
T ss_pred EEEEeCcCceECCccc-cHHHHHHHHHH
Confidence 6899999999999886 55666777777
No 144
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=94.23 E-value=0.031 Score=49.26 Aligned_cols=30 Identities=10% Similarity=0.093 Sum_probs=22.7
Q ss_pred CceEEEecCcccccChHHH---HHHHHHHHHHh
Q 027701 2 EDLYALDFDGVICDSCEET---ALSAVKAARVR 31 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i---~~s~~~a~~~~ 31 (220)
.++|+|||||||++.-..+ -..+..+++++
T Consensus 126 ~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~L 158 (301)
T TIGR01684 126 PHVVVFDLDSTLITDEEPVRIRDPRIYDSLTEL 158 (301)
T ss_pred ceEEEEecCCCCcCCCCccccCCHHHHHHHHHH
Confidence 3799999999999997654 35566666666
No 145
>PRK10671 copA copper exporting ATPase; Provisional
Probab=93.94 E-value=0.11 Score=52.04 Aligned_cols=67 Identities=19% Similarity=0.270 Sum_probs=48.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEe
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
..+++||+.++|+ ++|++++|+|++++..++.++++ +|++.+|..+ ...+|.+.+ ++++.++.+++|
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~---~p~~K~~~i----~~l~~~~~~v~~ 717 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV---LPDGKAEAI----KRLQSQGRQVAM 717 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC---CHHHHHHHH----HHHhhcCCEEEE
Confidence 4478999999999 88999999999999999999995 9997544322 111455544 444444555555
No 146
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=93.91 E-value=0.12 Score=52.12 Aligned_cols=46 Identities=20% Similarity=0.340 Sum_probs=40.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEec
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G 185 (220)
+++||+.++++ ++|+++.++|++....+..+.++ .|+...++.++.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~ 576 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVS 576 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeE
Confidence 78999999999 89999999999999999999995 999876654433
No 147
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=93.84 E-value=0.038 Score=48.72 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=22.2
Q ss_pred CceEEEecCcccccChHHH---HHHHHHHHHHh
Q 027701 2 EDLYALDFDGVICDSCEET---ALSAVKAARVR 31 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i---~~s~~~a~~~~ 31 (220)
.++|+||+||||+++-..+ -..+..+++++
T Consensus 128 ~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eL 160 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPVRIRDPFVYDSLDEL 160 (303)
T ss_pred ccEEEEecCCCccCCCCccccCChhHHHHHHHH
Confidence 4799999999999996655 34455555555
No 148
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=93.66 E-value=0.026 Score=41.69 Aligned_cols=15 Identities=33% Similarity=0.472 Sum_probs=13.4
Q ss_pred eEEEecCcccccChH
Q 027701 4 LYALDFDGVICDSCE 18 (220)
Q Consensus 4 ~viFDlDGTLvDS~~ 18 (220)
+++||+||||+++-.
T Consensus 1 ~~vfD~D~tl~~~~~ 15 (139)
T cd01427 1 AVLFDLDGTLLDSEP 15 (139)
T ss_pred CeEEccCCceEccCc
Confidence 589999999999875
No 149
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=93.63 E-value=0.098 Score=41.99 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=50.6
Q ss_pred HHHHhCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEec
Q 027701 146 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 146 elL~~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
.+|.+.|++++|+|.+....+++=.+. +|+..+|. |.. -|-..+.++++++++.++++.|-
T Consensus 45 k~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q---G~~--dK~~a~~~L~~~~~l~~e~~ayi 105 (170)
T COG1778 45 KLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ---GIS--DKLAAFEELLKKLNLDPEEVAYV 105 (170)
T ss_pred HHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee---chH--hHHHHHHHHHHHhCCCHHHhhhh
Confidence 344489999999999999999999996 99975543 433 57889999999999999998874
No 150
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.60 E-value=0.033 Score=46.92 Aligned_cols=23 Identities=13% Similarity=0.011 Sum_probs=16.8
Q ss_pred CcHHHHHHHHhhCCC--CCCceEec
Q 027701 190 PKVNVLKQLQKKPEH--QGLRLQRS 212 (220)
Q Consensus 190 pkp~~l~~~l~~~~~--~~~~~~~~ 212 (220)
.|+..+..+++.++. ...++++=
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~ 205 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGL 205 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEE
Confidence 688888888888865 55566553
No 151
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=93.50 E-value=0.03 Score=44.14 Aligned_cols=77 Identities=16% Similarity=0.059 Sum_probs=50.1
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCC-CCCCceEecCCCC---CcHHHHHHHHhhCCCCCCceEe
Q 027701 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 138 ~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl-~~~f~~v~G~~~~---pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
..+-||+.++|+ .+.+.++|.|+-.+..++.+++. +.- ..+|+.++..+.. .+.. .+-+..++.+.+++++
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~--~KdL~~l~~~~~~vvi 111 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY--IKDLSKLGRDLDNVVI 111 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE--E--GGGSSS-GGGEEE
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc--ccchHHHhhccccEEE
Confidence 345799999998 77799999999999999999995 765 4678877765421 1111 1556666667777776
Q ss_pred ccCCCC
Q 027701 212 STCNPE 217 (220)
Q Consensus 212 ~~~~~~ 217 (220)
=--+|.
T Consensus 112 vDD~~~ 117 (159)
T PF03031_consen 112 VDDSPR 117 (159)
T ss_dssp EES-GG
T ss_pred EeCCHH
Confidence 655554
No 152
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=93.44 E-value=0.041 Score=44.26 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=14.1
Q ss_pred CceEEEecCcccccCh
Q 027701 2 EDLYALDFDGVICDSC 17 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~ 17 (220)
.|+++||+||||+++-
T Consensus 13 ~k~~~~D~Dgtl~~~~ 28 (166)
T TIGR01664 13 SKVAAFDLDGTLITTR 28 (166)
T ss_pred CcEEEEeCCCceEecC
Confidence 5899999999999864
No 153
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=93.43 E-value=0.035 Score=43.90 Aligned_cols=15 Identities=47% Similarity=0.691 Sum_probs=13.3
Q ss_pred CceEEEecCcccccC
Q 027701 2 EDLYALDFDGVICDS 16 (220)
Q Consensus 2 ~~~viFDlDGTLvDS 16 (220)
+|+|+||+||||+|.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 479999999999993
No 154
>PRK10444 UMP phosphatase; Provisional
Probab=93.32 E-value=0.062 Score=46.05 Aligned_cols=25 Identities=8% Similarity=0.019 Sum_probs=22.6
Q ss_pred CCcHHHHHHHHhhCCCCCCceEecc
Q 027701 189 GPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 189 ~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
||+|+++..++++++.++++++|=-
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IG 198 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVG 198 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEEC
Confidence 6999999999999999999999844
No 155
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=92.99 E-value=0.051 Score=46.29 Aligned_cols=23 Identities=9% Similarity=0.078 Sum_probs=18.7
Q ss_pred CcHHHHHHHHhhCCCC--CCceEec
Q 027701 190 PKVNVLKQLQKKPEHQ--GLRLQRS 212 (220)
Q Consensus 190 pkp~~l~~~l~~~~~~--~~~~~~~ 212 (220)
.|...+.++++.++.+ .+++++-
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~ 200 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGL 200 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEE
Confidence 7888899999999888 7777653
No 156
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=92.81 E-value=0.068 Score=52.10 Aligned_cols=29 Identities=21% Similarity=0.291 Sum_probs=19.5
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
|+|++||||||+|+-..+......+++++
T Consensus 417 KLIfsDLDGTLLd~d~~i~~~t~eAL~~L 445 (694)
T PRK14502 417 KIVYTDLDGTLLNPLTYSYSTALDALRLL 445 (694)
T ss_pred eEEEEECcCCCcCCCCccCHHHHHHHHHH
Confidence 89999999999996443333334445444
No 157
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=92.65 E-value=0.07 Score=46.13 Aligned_cols=14 Identities=21% Similarity=0.525 Sum_probs=12.3
Q ss_pred ceEEEecCcccccC
Q 027701 3 DLYALDFDGVICDS 16 (220)
Q Consensus 3 ~~viFDlDGTLvDS 16 (220)
.+|+|||||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 48899999999983
No 158
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=92.02 E-value=0.79 Score=39.64 Aligned_cols=49 Identities=20% Similarity=0.296 Sum_probs=36.3
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCc---hHHHHHHHHHhhCCCCCCceEecC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~---~~~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
...+|||+.++|+ ++|++++++||.+ ......-|+. +|+....+.|+.+
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~ts 70 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFSS 70 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEecH
Confidence 3468999999998 7899999999954 4444455674 8987656666553
No 159
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.37 E-value=0.097 Score=44.44 Aligned_cols=14 Identities=21% Similarity=0.672 Sum_probs=12.5
Q ss_pred ceEEEecCcccccC
Q 027701 3 DLYALDFDGVICDS 16 (220)
Q Consensus 3 ~~viFDlDGTLvDS 16 (220)
++++|||||||+..
T Consensus 4 ~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 4 RAFFFDYDGTLSEI 17 (244)
T ss_pred EEEEEecCccccCC
Confidence 68999999999984
No 160
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.21 E-value=0.4 Score=40.89 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=40.2
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcC---CchHHHHHHHHHhhCCCCCCceEecC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~Tn---K~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
..++||..+.|+ ++|+++.++|| ++.......|+. +|++...+.|+.+
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~ 69 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTA 69 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeH
Confidence 467899999998 89999999998 667888888885 9998777777665
No 161
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=90.87 E-value=0.12 Score=41.84 Aligned_cols=15 Identities=47% Similarity=0.678 Sum_probs=13.9
Q ss_pred CceEEEecCcccccC
Q 027701 2 EDLYALDFDGVICDS 16 (220)
Q Consensus 2 ~~~viFDlDGTLvDS 16 (220)
.|+++||+||||.|.
T Consensus 7 i~~~v~d~dGv~tdg 21 (169)
T TIGR02726 7 IKLVILDVDGVMTDG 21 (169)
T ss_pred CeEEEEeCceeeECC
Confidence 479999999999998
No 162
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=90.61 E-value=0.27 Score=41.66 Aligned_cols=23 Identities=17% Similarity=0.018 Sum_probs=20.5
Q ss_pred CcHHHHHHHHhhCCCCCCceEec
Q 027701 190 PKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 190 pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
+|...+..+++.++.+++++++-
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~ 189 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVC 189 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEE
Confidence 89999999999999998888764
No 163
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=90.54 E-value=0.14 Score=41.16 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=15.3
Q ss_pred CCceEEEecCcccccCh
Q 027701 1 MEDLYALDFDGVICDSC 17 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~ 17 (220)
|+|++|||.||||.|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 56999999999999975
No 164
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=90.50 E-value=0.15 Score=41.40 Aligned_cols=17 Identities=18% Similarity=0.215 Sum_probs=12.1
Q ss_pred CceEEEecCcccccChH
Q 027701 2 EDLYALDFDGVICDSCE 18 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~ 18 (220)
+++|+||||+||-+---
T Consensus 3 PklvvFDLD~TlW~~~~ 19 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWM 19 (169)
T ss_dssp -SEEEE-STTTSSSS-T
T ss_pred CcEEEEcCcCCCCchhH
Confidence 48999999999976544
No 165
>PTZ00445 p36-lilke protein; Provisional
Probab=90.09 E-value=0.43 Score=40.19 Aligned_cols=79 Identities=18% Similarity=0.178 Sum_probs=58.2
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCch---------------HHHHHHHHHhhCCCCCCceEecCC--------------
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG-------------- 187 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~---------------~~a~~iL~~~~gl~~~f~~v~G~~-------------- 187 (220)
+=|....++. +.|++++|||=-++ ++++..|+. .+-+.-...|++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 4566666666 78999999996554 468888884 66665555565431
Q ss_pred -CCCcHHH--H--HHHHhhCCCCCCceEeccCCCCCC
Q 027701 188 -TGPKVNV--L--KQLQKKPEHQGLRLQRSTCNPEEC 219 (220)
Q Consensus 188 -~~pkp~~--l--~~~l~~~~~~~~~~~~~~~~~~~~ 219 (220)
.||.|+. . .+++++.|+.+++++|=--+++.|
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NV 191 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNC 191 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHH
Confidence 1377877 6 999999999999999977666655
No 166
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=89.98 E-value=0.18 Score=39.49 Aligned_cols=17 Identities=24% Similarity=0.401 Sum_probs=14.9
Q ss_pred CceEEEecCcccccChH
Q 027701 2 EDLYALDFDGVICDSCE 18 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~ 18 (220)
+..+++||||||+++..
T Consensus 2 k~~lvldld~tl~~~~~ 18 (148)
T smart00577 2 KKTLVLDLDETLVHSTH 18 (148)
T ss_pred CcEEEEeCCCCeECCCC
Confidence 46899999999999965
No 167
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=89.63 E-value=0.14 Score=43.31 Aligned_cols=25 Identities=8% Similarity=-0.012 Sum_probs=21.2
Q ss_pred CCcHHHHHHHHhhCCCCCCce-Eecc
Q 027701 189 GPKVNVLKQLQKKPEHQGLRL-QRST 213 (220)
Q Consensus 189 ~pkp~~l~~~l~~~~~~~~~~-~~~~ 213 (220)
||+|+++..++++++.++.+. +|=-
T Consensus 188 KP~~~~~~~~~~~~~~~~~~~~~~IG 213 (236)
T TIGR01460 188 KPSPAIYRAALNLLQARPERRDVMVG 213 (236)
T ss_pred CCCHHHHHHHHHHhCCCCccceEEEC
Confidence 699999999999999888776 6643
No 168
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=89.35 E-value=0.59 Score=40.19 Aligned_cols=40 Identities=15% Similarity=0.357 Sum_probs=33.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHH----HHHHHHHhhCCC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRF----VETLLRELAGVT 177 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~----a~~iL~~~~gl~ 177 (220)
.+++-||+.|.|+ ++|.++.-+||..++. +..-|.+ +|+.
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~ 166 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLP 166 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcc
Confidence 4689999999999 8999999999988776 5566664 7775
No 169
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=89.30 E-value=1.4 Score=37.63 Aligned_cols=89 Identities=18% Similarity=0.181 Sum_probs=65.1
Q ss_pred HhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhC-------CCCCCceEecCCCCCcHHHH
Q 027701 126 WMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTGPKVNVL 195 (220)
Q Consensus 126 y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~g-------l~~~f~~v~G~~~~pkp~~l 195 (220)
|..-|..+-+ ...+|+.|...++ .+|++++|-|+-+...-+.+-. |.+ ++.|||.-+|.- .-....
T Consensus 111 w~~gy~sg~l-k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg-~s~~gdl~~y~~gyfDt~iG~K--~e~~sy 186 (254)
T KOG2630|consen 111 WAAGYESGEL-KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFG-YSDAGDLRKYISGYFDTTIGLK--VESQSY 186 (254)
T ss_pred HHhhcccccc-cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHc-ccCcchHHHHhhhhhhccccce--ehhHHH
Confidence 4444555544 3479999999999 8999999998887665555544 232 346677666532 345788
Q ss_pred HHHHhhCCCCCCceEeccCCCCC
Q 027701 196 KQLQKKPEHQGLRLQRSTCNPEE 218 (220)
Q Consensus 196 ~~~l~~~~~~~~~~~~~~~~~~~ 218 (220)
.++.+..+.++.+++|-|-+|.|
T Consensus 187 ~~I~~~Ig~s~~eiLfLTd~~~E 209 (254)
T KOG2630|consen 187 KKIGHLIGKSPREILFLTDVPRE 209 (254)
T ss_pred HHHHHHhCCChhheEEeccChHH
Confidence 89999999999999999988755
No 170
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=88.95 E-value=0.63 Score=43.47 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=36.6
Q ss_pred CccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCC--------CCCCceEecCCCC
Q 027701 141 YPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGV--------TITPDRLYGLGTG 189 (220)
Q Consensus 141 ypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl--------~~~f~~v~G~~~~ 189 (220)
=|.+..+|+ ++|.++.++||-+-.+++.+++..+|- ..+||.|+....|
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~K 244 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARK 244 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--C
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCC
Confidence 378889998 889999999999999999999954444 4899999876544
No 171
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=88.75 E-value=0.22 Score=36.64 Aligned_cols=19 Identities=26% Similarity=0.525 Sum_probs=14.1
Q ss_pred EEEecCcccccChHHHHHH
Q 027701 5 YALDFDGVICDSCEETALS 23 (220)
Q Consensus 5 viFDlDGTLvDS~~~i~~s 23 (220)
++||+||||.+.-..|-.|
T Consensus 1 ~l~D~dGvl~~g~~~ipga 19 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGA 19 (101)
T ss_dssp EEEESTTTSEETTEE-TTH
T ss_pred CEEeCccEeEeCCCcCcCH
Confidence 6899999999876554444
No 172
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.73 E-value=0.44 Score=40.89 Aligned_cols=46 Identities=26% Similarity=0.381 Sum_probs=33.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEec
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYG 185 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~---a~~iL~~~~gl~~~f~~v~G 185 (220)
.++||..+.|+ ++|++++++||.+... ....|+. +|++.-.+.|+.
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~t 72 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFT 72 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEc
Confidence 37999999999 7899999999966654 5556664 787643444443
No 173
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=88.14 E-value=0.27 Score=40.83 Aligned_cols=16 Identities=31% Similarity=0.428 Sum_probs=13.9
Q ss_pred CceEEEecCcccccCh
Q 027701 2 EDLYALDFDGVICDSC 17 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~ 17 (220)
++++++||||||+|+.
T Consensus 21 kklLVLDLDeTLvh~~ 36 (195)
T TIGR02245 21 KKLLVLDIDYTLFDHR 36 (195)
T ss_pred CcEEEEeCCCceEccc
Confidence 3799999999999863
No 174
>PLN02151 trehalose-phosphatase
Probab=87.45 E-value=0.35 Score=43.79 Aligned_cols=29 Identities=21% Similarity=0.232 Sum_probs=19.4
Q ss_pred ceEEEecCcccc----cChH-HHHHHHHHHHHHh
Q 027701 3 DLYALDFDGVIC----DSCE-ETALSAVKAARVR 31 (220)
Q Consensus 3 ~~viFDlDGTLv----DS~~-~i~~s~~~a~~~~ 31 (220)
.+++|||||||+ |.-. .+...+..+++++
T Consensus 99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~L 132 (354)
T PLN02151 99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKL 132 (354)
T ss_pred eEEEEecCccCCCCCCCcccccCCHHHHHHHHHH
Confidence 477889999999 3333 3445555666666
No 175
>PLN03017 trehalose-phosphatase
Probab=87.43 E-value=0.35 Score=43.92 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=18.4
Q ss_pred ceEEEecCcccc---c-ChH-HHHHHHHHHHHHh
Q 027701 3 DLYALDFDGVIC---D-SCE-ETALSAVKAARVR 31 (220)
Q Consensus 3 ~~viFDlDGTLv---D-S~~-~i~~s~~~a~~~~ 31 (220)
.+++||+||||+ + .-. .+...+..+++++
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~L 145 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKL 145 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHH
Confidence 467779999999 3 332 3444555555555
No 176
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=86.72 E-value=0.99 Score=44.75 Aligned_cols=58 Identities=17% Similarity=0.262 Sum_probs=44.9
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHH
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQ 199 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l 199 (220)
..+++||+.++++ ++|++++|+|+++...++.+.++ +|++.++. ....-|++.+.++-
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~ 626 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELN 626 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHh
Confidence 3479999999999 78999999999999999999995 99974332 11113677666543
No 177
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=86.46 E-value=0.36 Score=38.74 Aligned_cols=14 Identities=36% Similarity=0.287 Sum_probs=12.2
Q ss_pred ceEEEecCcccccC
Q 027701 3 DLYALDFDGVICDS 16 (220)
Q Consensus 3 ~~viFDlDGTLvDS 16 (220)
++++||+||||+..
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (176)
T TIGR00213 2 KAIFLDRDGTINID 15 (176)
T ss_pred CEEEEeCCCCEeCC
Confidence 68999999999953
No 178
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=86.39 E-value=0.67 Score=46.68 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=14.4
Q ss_pred CCceEEEecCcccccCh
Q 027701 1 MEDLYALDFDGVICDSC 17 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~ 17 (220)
|.++++||+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 45899999999999655
No 179
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=86.22 E-value=0.81 Score=39.03 Aligned_cols=28 Identities=25% Similarity=0.305 Sum_probs=20.8
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHH
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAAR 29 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~ 29 (220)
.++++.||||||+|.-.......+.-++
T Consensus 2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~ 29 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDEALARLEELLE 29 (247)
T ss_dssp SEEEEEETBTTTBHCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCcCCCHHHHHHHHHHHH
Confidence 3689999999999766666666655555
No 180
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=86.02 E-value=0.66 Score=45.73 Aligned_cols=13 Identities=38% Similarity=0.761 Sum_probs=12.4
Q ss_pred ceEEEecCccccc
Q 027701 3 DLYALDFDGVICD 15 (220)
Q Consensus 3 ~~viFDlDGTLvD 15 (220)
++++||+||||++
T Consensus 493 rLi~~D~DGTL~~ 505 (726)
T PRK14501 493 RLLLLDYDGTLVP 505 (726)
T ss_pred eEEEEecCccccC
Confidence 7999999999998
No 181
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=85.84 E-value=0.77 Score=40.03 Aligned_cols=51 Identities=35% Similarity=0.552 Sum_probs=36.6
Q ss_pred cCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHH---HHHhhCCCCCCceEecC
Q 027701 136 GANRLYPGVSDALK---LASSRIYIVTSNQSRFVETL---LRELAGVTITPDRLYGL 186 (220)
Q Consensus 136 ~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~i---L~~~~gl~~~f~~v~G~ 186 (220)
...++|||+.+.|+ ++|+++.++||++....+.+ |+.+.+++-..+.|+.+
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS 77 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS 77 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH
Confidence 35689999999999 89999999999776554433 22124565556666655
No 182
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=85.59 E-value=0.41 Score=41.66 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=14.7
Q ss_pred CceEEEecCcccccChH
Q 027701 2 EDLYALDFDGVICDSCE 18 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~ 18 (220)
+++++||+||||++-.+
T Consensus 18 ~~~~~lDyDGTl~~i~~ 34 (266)
T COG1877 18 KRLLFLDYDGTLTEIVP 34 (266)
T ss_pred ceEEEEecccccccccc
Confidence 37999999999999765
No 183
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=85.15 E-value=2.1 Score=35.27 Aligned_cols=37 Identities=24% Similarity=0.216 Sum_probs=31.2
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
..+-..+.|+ ++|++++|+||++...++.+++. +|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 3444667777 89999999999999999999995 9986
No 184
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=84.42 E-value=0.57 Score=40.82 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=46.1
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHH------------HHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhC
Q 027701 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRF------------VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKP 202 (220)
Q Consensus 137 ~~~lypGv~elL~--~~g~~l~I~TnK~~~~------------a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~ 202 (220)
...-|.-..+.+. .+| -..|+||...-. .-..++..-|-.. .++| ||.|.+...+++.+
T Consensus 131 ~~~~~e~l~~a~~~i~~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~---~~~G---KP~~~i~~~al~~~ 203 (269)
T COG0647 131 RTLTYEKLAEALLAIAAG-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREP---TVIG---KPSPAIYEAALEKL 203 (269)
T ss_pred CCCCHHHHHHHHHHHHcC-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcc---cccC---CCCHHHHHHHHHHh
Confidence 3445666666666 666 568888876433 2233332122211 3333 58899999999999
Q ss_pred CCCCCceEeccCCC
Q 027701 203 EHQGLRLQRSTCNP 216 (220)
Q Consensus 203 ~~~~~~~~~~~~~~ 216 (220)
+...++++|=--|.
T Consensus 204 ~~~~~~~~mVGD~~ 217 (269)
T COG0647 204 GLDRSEVLMVGDRL 217 (269)
T ss_pred CCCcccEEEEcCCc
Confidence 99999988855443
No 185
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=84.25 E-value=2.3 Score=35.72 Aligned_cols=39 Identities=23% Similarity=0.054 Sum_probs=34.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~ 178 (220)
...|+..+.|+ ++|+++.++|+++...+..++++ +|+..
T Consensus 15 ~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~ 56 (225)
T TIGR02461 15 YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEP 56 (225)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 46778889988 78999999999999999999996 99854
No 186
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=83.98 E-value=0.62 Score=37.15 Aligned_cols=16 Identities=25% Similarity=0.418 Sum_probs=13.9
Q ss_pred CceEEEecCcccccCh
Q 027701 2 EDLYALDFDGVICDSC 17 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~ 17 (220)
++.+++|||+|||.|-
T Consensus 1 k~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 1 KKTLVLDLDETLVHST 16 (162)
T ss_pred CcEEEEcCCCCcCCCC
Confidence 3679999999999994
No 187
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=83.77 E-value=0.57 Score=37.43 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=13.9
Q ss_pred ceEEEecCcccccChH
Q 027701 3 DLYALDFDGVICDSCE 18 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~ 18 (220)
++++||.||||.++.+
T Consensus 2 ~~~~~d~dg~l~~~~~ 17 (161)
T TIGR01261 2 KILFIDRDGTLIEEPP 17 (161)
T ss_pred CEEEEeCCCCccccCC
Confidence 6899999999999654
No 188
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=83.53 E-value=0.87 Score=38.26 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=14.1
Q ss_pred EEecCcccccChH-----HHHHHHHHHHHHh
Q 027701 6 ALDFDGVICDSCE-----ETALSAVKAARVR 31 (220)
Q Consensus 6 iFDlDGTLvDS~~-----~i~~s~~~a~~~~ 31 (220)
+||+||||++-.+ -....+..+|++|
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~L 31 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRAL 31 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHH
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHH
Confidence 5899999998776 3344555666666
No 189
>COG4996 Predicted phosphatase [General function prediction only]
Probab=82.51 E-value=0.69 Score=36.25 Aligned_cols=16 Identities=19% Similarity=0.247 Sum_probs=13.4
Q ss_pred ceEEEecCcccccChH
Q 027701 3 DLYALDFDGVICDSCE 18 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~ 18 (220)
++++||+||||-|--.
T Consensus 1 ~~i~~d~d~t~wdhh~ 16 (164)
T COG4996 1 RAIVFDADKTLWDHHN 16 (164)
T ss_pred CcEEEeCCCccccccc
Confidence 4799999999999643
No 190
>PLN02580 trehalose-phosphatase
Probab=82.37 E-value=0.7 Score=42.31 Aligned_cols=37 Identities=22% Similarity=0.188 Sum_probs=21.2
Q ss_pred cCCchHHHHHHHHHhhCCCCC---CceEecCCCCCcHHHHHHH
Q 027701 159 TSNQSRFVETLLRELAGVTIT---PDRLYGLGTGPKVNVLKQL 198 (220)
Q Consensus 159 TnK~~~~a~~iL~~~~gl~~~---f~~v~G~~~~pkp~~l~~~ 198 (220)
.||. ..++.++++ +|+... +-..+|.+ ..+-+++..+
T Consensus 300 ~~KG-~Av~~Ll~~-~g~~~~d~~~pi~iGDD-~TDedmF~~L 339 (384)
T PLN02580 300 WNKG-KAVEFLLES-LGLSNCDDVLPIYIGDD-RTDEDAFKVL 339 (384)
T ss_pred CCHH-HHHHHHHHh-cCCCcccceeEEEECCC-chHHHHHHhh
Confidence 3555 445678884 888643 12455644 3566666544
No 191
>PRK10444 UMP phosphatase; Provisional
Probab=82.23 E-value=1.5 Score=37.47 Aligned_cols=48 Identities=21% Similarity=0.275 Sum_probs=35.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--hhCCCCCCceEecC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDRLYGL 186 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~--~~gl~~~f~~v~G~ 186 (220)
+++||+.+.|+ ++|+++.++||.+....+.+.++ .+|++.-.+.|+.+
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecH
Confidence 68999999998 88999999999888665555552 15775445555543
No 192
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=79.73 E-value=2.4 Score=34.37 Aligned_cols=13 Identities=15% Similarity=0.171 Sum_probs=12.0
Q ss_pred CceEEEecCcccc
Q 027701 2 EDLYALDFDGVIC 14 (220)
Q Consensus 2 ~~~viFDlDGTLv 14 (220)
+|+|+||+|.||+
T Consensus 41 ik~li~DkDNTL~ 53 (168)
T PF09419_consen 41 IKALIFDKDNTLT 53 (168)
T ss_pred ceEEEEcCCCCCC
Confidence 4899999999998
No 193
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=79.71 E-value=2.6 Score=32.91 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.2
Q ss_pred ceEEEecCcccccChH
Q 027701 3 DLYALDFDGVICDSCE 18 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~ 18 (220)
|+++|||||||+++..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 5799999999999865
No 194
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=78.67 E-value=3.6 Score=38.81 Aligned_cols=65 Identities=17% Similarity=0.217 Sum_probs=54.8
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC------C--CCcHHHHHHHHhhCCCCCCceEeccCCCCCCC
Q 027701 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG------T--GPKVNVLKQLQKKPEHQGLRLQRSTCNPEECD 220 (220)
Q Consensus 150 ~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~------~--~pkp~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 220 (220)
++|+-++|+|-+....++.+.+. + -+.|.-.+ - .||.+-++++++++|+-.+.++|-.-||-||+
T Consensus 269 kqGVlLav~SKN~~~da~evF~k-h-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE 341 (574)
T COG3882 269 KQGVLLAVCSKNTEKDAKEVFRK-H-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERE 341 (574)
T ss_pred hccEEEEEecCCchhhHHHHHhh-C-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHH
Confidence 88999999999999999999885 3 34454433 1 29999999999999999999999999998884
No 195
>PRK06769 hypothetical protein; Validated
Probab=78.24 E-value=1.3 Score=35.49 Aligned_cols=13 Identities=31% Similarity=0.299 Sum_probs=11.6
Q ss_pred CceEEEecCcccc
Q 027701 2 EDLYALDFDGVIC 14 (220)
Q Consensus 2 ~~~viFDlDGTLv 14 (220)
+|+++||.||||.
T Consensus 4 ~~~~~~d~d~~~~ 16 (173)
T PRK06769 4 IQAIFIDRDGTIG 16 (173)
T ss_pred CcEEEEeCCCccc
Confidence 4899999999993
No 196
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=77.78 E-value=4.9 Score=33.83 Aligned_cols=50 Identities=24% Similarity=0.426 Sum_probs=34.8
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCC---chHHHHHHHHHhhCCCCCCceEecC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSN---QSRFVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK---~~~~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
...+|||+.+.|. ++|+++.++||. +.......|.+++|+....+.|+-+
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 4568999999998 789999999964 4444444444247876556655554
No 197
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=77.54 E-value=4.7 Score=33.06 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=34.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~ 179 (220)
++-|...+.|+ ++|++++|+|+++...++.+++. ++++.+
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l~~~~~ 60 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVL-IGTSGP 60 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHH-hCCCCc
Confidence 56788888888 89999999999999999999995 887643
No 198
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=75.79 E-value=1.4 Score=40.22 Aligned_cols=19 Identities=21% Similarity=0.522 Sum_probs=16.5
Q ss_pred ceEEEecCcccccChHHHH
Q 027701 3 DLYALDFDGVICDSCEETA 21 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~ 21 (220)
+.+.||+||||+|+.....
T Consensus 76 K~i~FD~dgtlI~t~sg~v 94 (422)
T KOG2134|consen 76 KIIMFDYDGTLIDTKSGKV 94 (422)
T ss_pred ceEEEecCCceeecCCcce
Confidence 7899999999999988544
No 199
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=75.73 E-value=1.7 Score=34.64 Aligned_cols=19 Identities=16% Similarity=0.288 Sum_probs=16.0
Q ss_pred ceEEEecCcccccChHHHH
Q 027701 3 DLYALDFDGVICDSCEETA 21 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~ 21 (220)
..+++|||.||+.|...-.
T Consensus 7 l~LVLDLDeTLihs~~~~~ 25 (156)
T TIGR02250 7 LHLVLDLDQTLIHTTKDPT 25 (156)
T ss_pred eEEEEeCCCCcccccccCc
Confidence 5789999999999988643
No 200
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=75.67 E-value=6.1 Score=32.48 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=33.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~ 179 (220)
.+-|...+.|. ++|++++|+|+++...+..+++. +|+..+
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKL-IGTSGP 62 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCc
Confidence 35567777777 79999999999999999999995 998754
No 201
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=75.39 E-value=1.8 Score=34.55 Aligned_cols=15 Identities=20% Similarity=0.076 Sum_probs=12.9
Q ss_pred CceEEEecCcccccC
Q 027701 2 EDLYALDFDGVICDS 16 (220)
Q Consensus 2 ~~~viFDlDGTLvDS 16 (220)
.++|+||+||||.+.
T Consensus 25 v~~vv~D~Dgtl~~~ 39 (170)
T TIGR01668 25 IKGVVLDKDNTLVYP 39 (170)
T ss_pred CCEEEEecCCccccC
Confidence 379999999999954
No 202
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=74.66 E-value=1.8 Score=36.96 Aligned_cols=15 Identities=33% Similarity=0.403 Sum_probs=12.5
Q ss_pred CCceEEEecCccccc
Q 027701 1 MEDLYALDFDGVICD 15 (220)
Q Consensus 1 ~~~~viFDlDGTLvD 15 (220)
|+.+|..|+||||++
T Consensus 6 ~~~lIFtDlD~TLl~ 20 (274)
T COG3769 6 MPLLIFTDLDGTLLP 20 (274)
T ss_pred cceEEEEcccCcccC
Confidence 456777799999999
No 203
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=72.55 E-value=5.1 Score=32.65 Aligned_cols=38 Identities=26% Similarity=0.441 Sum_probs=33.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
.+-|...+.|+ ++|++++|+|+++...+..+++. +++.
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~~~ 55 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKE-LGID 55 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHH-TTHC
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCccccccccccc-ccch
Confidence 46688888888 79999999999999999999995 8886
No 204
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=72.31 E-value=17 Score=29.38 Aligned_cols=68 Identities=16% Similarity=0.215 Sum_probs=42.4
Q ss_pred CCCCCccHHHHHH---hCCC--cEEEEcCC-------chHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCC
Q 027701 137 ANRLYPGVSDALK---LASS--RIYIVTSN-------QSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEH 204 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~--~l~I~TnK-------~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~ 204 (220)
...+.|.+.+.++ +.+. ++.|+||. ....++.+-+. +|+. ++.-... ||....++++.++.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~k--KP~~~~~i~~~~~~ 129 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAK--KPGCFREILKYFKC 129 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCC--CCccHHHHHHHHhh
Confidence 3567788888887 4444 59999997 47778888784 8863 2322223 34444455555543
Q ss_pred -----CCCceEe
Q 027701 205 -----QGLRLQR 211 (220)
Q Consensus 205 -----~~~~~~~ 211 (220)
+++++++
T Consensus 130 ~~~~~~p~eiav 141 (168)
T PF09419_consen 130 QKVVTSPSEIAV 141 (168)
T ss_pred ccCCCCchhEEE
Confidence 3777665
No 205
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=71.59 E-value=7.8 Score=32.62 Aligned_cols=38 Identities=21% Similarity=0.399 Sum_probs=31.4
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~ 178 (220)
+-+...+.|+ ++|++++|+|+.+...+..+++. +|+..
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~~ 57 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKE-LGLDT 57 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 3455666776 78999999999999999999996 88764
No 206
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=71.58 E-value=2.6 Score=38.21 Aligned_cols=17 Identities=24% Similarity=0.473 Sum_probs=15.4
Q ss_pred CCceEEEecCcccccCh
Q 027701 1 MEDLYALDFDGVICDSC 17 (220)
Q Consensus 1 ~~~~viFDlDGTLvDS~ 17 (220)
|.++++||.||||+...
T Consensus 1 ~~k~l~lDrDgtl~~~~ 17 (354)
T PRK05446 1 MQKILFIDRDGTLIEEP 17 (354)
T ss_pred CCcEEEEeCCCCccCCC
Confidence 67999999999999974
No 207
>PLN02382 probable sucrose-phosphatase
Probab=71.50 E-value=2.2 Score=39.38 Aligned_cols=14 Identities=21% Similarity=0.377 Sum_probs=11.0
Q ss_pred eEEEecCcccccCh
Q 027701 4 LYALDFDGVICDSC 17 (220)
Q Consensus 4 ~viFDlDGTLvDS~ 17 (220)
+|+-||||||+|+-
T Consensus 11 lI~sDLDGTLL~~~ 24 (413)
T PLN02382 11 MIVSDLDHTMVDHH 24 (413)
T ss_pred EEEEcCCCcCcCCC
Confidence 44559999999973
No 208
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=71.42 E-value=9 Score=32.31 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=33.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~ 179 (220)
.+-|...+.|+ ++|++++|+|+.+...+..+++. ++++.+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQA-LALDTP 62 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCC
Confidence 45666777777 89999999999999999999996 888643
No 209
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=71.31 E-value=8.2 Score=32.85 Aligned_cols=40 Identities=10% Similarity=0.028 Sum_probs=34.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~ 179 (220)
.+-+-..+.|+ ++|++++|+|+++...+..+++. +|++.+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGA-LSLDAY 61 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCc
Confidence 46677778888 89999999999999999999996 988754
No 210
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=70.70 E-value=15 Score=31.56 Aligned_cols=86 Identities=12% Similarity=0.186 Sum_probs=58.7
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 100 IKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 100 ~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
+...|+-.+|++.+++++.-+ ...++-||..++++ ++-.+=.|+|...+..++++.. +.|+.
T Consensus 59 LivPFL~ahGVt~~dlrr~sE---------------~sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~-~ig~P 122 (315)
T COG4030 59 LIVPFLAAHGVTNRDLRRISE---------------LSAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTAS-MIGVP 122 (315)
T ss_pred hHHHHHHHhcCcHHHHHHHHH---------------hhcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHH-hcCCC
Confidence 445677788998887754332 13689999999999 7777889999999999999999 58873
Q ss_pred CCCceEecCC----CCCcHHHHH-HHHhhCC
Q 027701 178 ITPDRLYGLG----TGPKVNVLK-QLQKKPE 203 (220)
Q Consensus 178 ~~f~~v~G~~----~~pkp~~l~-~~l~~~~ 203 (220)
-..+.|-. +-+-|+-.+ +++..+.
T Consensus 123 --rg~~~~Te~~lD~~~~PeeeR~E~L~~~~ 151 (315)
T COG4030 123 --RGELHGTEVDLDSIAVPEEEREELLSIID 151 (315)
T ss_pred --ccccccccccCccccCChHHHHHHHHhcC
Confidence 23344432 224444444 5555543
No 211
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=70.67 E-value=2.3 Score=42.58 Aligned_cols=16 Identities=25% Similarity=0.457 Sum_probs=13.2
Q ss_pred ceEEEecCcccccChH
Q 027701 3 DLYALDFDGVICDSCE 18 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~ 18 (220)
++++||+||||+.-.+
T Consensus 508 rll~LDyDGTL~~~~~ 523 (797)
T PLN03063 508 RLLILGFYGTLTEPRN 523 (797)
T ss_pred eEEEEecCccccCCCC
Confidence 6899999999996543
No 212
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=70.51 E-value=2.3 Score=43.32 Aligned_cols=14 Identities=21% Similarity=0.527 Sum_probs=12.3
Q ss_pred ceEEEecCcccccC
Q 027701 3 DLYALDFDGVICDS 16 (220)
Q Consensus 3 ~~viFDlDGTLvDS 16 (220)
++++||+||||+.-
T Consensus 592 RLlfLDyDGTLap~ 605 (934)
T PLN03064 592 RLLILGFNATLTEP 605 (934)
T ss_pred eEEEEecCceeccC
Confidence 68899999999974
No 213
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=70.09 E-value=9.3 Score=32.29 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=46.1
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC---C-C------CcHHHHHHHHhhC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---T-G------PKVNVLKQLQKKP 202 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~---~-~------pkp~~l~~~l~~~ 202 (220)
.++-+-..+.|+ ++|++++|+|+.+-..+..+++. ++++.++-..-|+- . + -.++.+.++++..
T Consensus 19 ~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~ 95 (264)
T COG0561 19 KTISPETKEALARLREKGVKVVLATGRPLPDVLSILEE-LGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELL 95 (264)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHH
Confidence 347788888888 89999999999999999999996 99986433333331 1 1 2356666666555
No 214
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=70.04 E-value=3.7 Score=28.00 Aligned_cols=25 Identities=20% Similarity=0.106 Sum_probs=22.7
Q ss_pred CCcHHHHHHHHhhCCCCCCceEecc
Q 027701 189 GPKVNVLKQLQKKPEHQGLRLQRST 213 (220)
Q Consensus 189 ~pkp~~l~~~l~~~~~~~~~~~~~~ 213 (220)
||+|.++..++++++.++++++|=.
T Consensus 4 KP~p~~~~~a~~~~~~~~~~~~~VG 28 (75)
T PF13242_consen 4 KPSPGMLEQALKRLGVDPSRCVMVG 28 (75)
T ss_dssp TTSHHHHHHHHHHHTSGGGGEEEEE
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEEc
Confidence 6999999999999999999998754
No 215
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=69.14 E-value=11 Score=30.79 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=32.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~ 178 (220)
.+-|...+.|+ ++|++++++|+++...+..+++. +|+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l~~~~ 56 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKL-IGTPD 56 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCC
Confidence 45677778887 79999999999999999999995 88643
No 216
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=68.88 E-value=2.6 Score=37.22 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=14.4
Q ss_pred CceEEEecCcccccCh
Q 027701 2 EDLYALDFDGVICDSC 17 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~ 17 (220)
+|+|+||||+||....
T Consensus 3 ~k~~v~DlDnTlw~gv 18 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGV 18 (320)
T ss_pred eEEEEEcCCCCCCCCE
Confidence 5899999999998875
No 217
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=68.38 E-value=7.7 Score=39.49 Aligned_cols=39 Identities=26% Similarity=0.424 Sum_probs=36.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~ 178 (220)
+|+||+.+.++ ++|+++.++|+.....+..+.++ .|+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~ 578 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFS 578 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCC
Confidence 68999999999 99999999999999999999995 99853
No 218
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=68.15 E-value=12 Score=31.62 Aligned_cols=37 Identities=22% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
..+...+.|+ ++|++++|+|+++...+..+++. +|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKE-LGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 4455677777 88999999999999999999996 8875
No 219
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=67.67 E-value=16 Score=29.86 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=22.3
Q ss_pred CCccHHHHHH--hCCCcEEEEcCCchHHHHHH
Q 027701 140 LYPGVSDALK--LASSRIYIVTSNQSRFVETL 169 (220)
Q Consensus 140 lypGv~elL~--~~g~~l~I~TnK~~~~a~~i 169 (220)
+=.+|...|. +...+++-+|+....+.+..
T Consensus 73 ~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT 104 (194)
T COG5663 73 LAQLVKQVLPSLKEEHRLIYITARKADLTRIT 104 (194)
T ss_pred HHHHHHHHhHHHHhhceeeeeehhhHHHHHHH
Confidence 3467777777 67778999999888776644
No 220
>PRK10976 putative hydrolase; Provisional
Probab=66.71 E-value=11 Score=31.87 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=33.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~ 179 (220)
++=|...+.|+ ++|++++|+|+.+...+..+++. +|++.+
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDN-LEIKSY 61 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCe
Confidence 35566777777 89999999999999999999995 888643
No 221
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=65.99 E-value=14 Score=31.48 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=32.3
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
.+.+-..+.|+ ++|++++|+|+++...+..+++. +|++
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCC
Confidence 34566667777 89999999999999999999996 9985
No 222
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=65.59 E-value=13 Score=31.24 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=27.2
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEec
Q 027701 150 LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 185 (220)
Q Consensus 150 ~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G 185 (220)
++|++++++|+++...++.+++. +++.. .+.+++
T Consensus 35 ~~gi~fv~aTGR~~~~~~~~~~~-~~~~~-p~~~I~ 68 (249)
T TIGR01485 35 GEDSLLVYSTGRSPHSYKELQKQ-KPLLT-PDIWVT 68 (249)
T ss_pred ccCceEEEEcCCCHHHHHHHHhc-CCCCC-CCEEEE
Confidence 78999999999999999999995 88753 334444
No 223
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=65.46 E-value=16 Score=32.30 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=41.3
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (220)
.=|.|.+-|. +.|.-+.+=|.-.++-+...|+. +++..+|+.|++++
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGG 192 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCC
Confidence 3478888887 88999999999999999999996 99999999998764
No 224
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=63.42 E-value=31 Score=27.13 Aligned_cols=70 Identities=13% Similarity=0.258 Sum_probs=49.7
Q ss_pred ccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEe
Q 027701 135 IGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 135 ~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
...-++|+.|.+.++ +. +.+.|+|.-...++.++++- .|+. .+.+... .++++=.+++++++-+...++|
T Consensus 26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~-~gi~--~~rv~a~---a~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEF-VGIP--VERVFAG---ADPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred ccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHH-cCCc--eeeeecc---cCHHHHHHHHHHhcCCCcEEEE
Confidence 334589999999999 66 99999999999999999994 8875 2333221 3455556666666655444444
No 225
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=62.69 E-value=15 Score=37.41 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=48.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCceEeccC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLQRSTC 214 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~~pkp~~l~~~l~~~~~~~~~~~~~~~ 214 (220)
+|=|++.+.++ ++|+++.++|+-....+..+-++ .|+.. -..+.|.+ ..=..+-+.+++++. .+|+-+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~-~~v~~G~el~~l~~~el~~~~~~~------~VfAr~ 621 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDA-GEVLIGSDIETLSDDELANLAERT------TLFARL 621 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCc-cCceeHHHHHhCCHHHHHHHHhhC------cEEEEc
Confidence 45588899998 89999999999999999999996 99952 23445543 111223344444432 367777
Q ss_pred CCC
Q 027701 215 NPE 217 (220)
Q Consensus 215 ~~~ 217 (220)
+||
T Consensus 622 sPe 624 (902)
T PRK10517 622 TPM 624 (902)
T ss_pred CHH
Confidence 776
No 226
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=61.87 E-value=22 Score=36.04 Aligned_cols=47 Identities=15% Similarity=0.240 Sum_probs=38.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 187 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~ 187 (220)
+|=|++.+.++ ++|+++.++|+-....+..+-++ .|+.. -+.+.|.+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~-~~v~~g~~ 564 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDA-NDFLLGAD 564 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCC-CCeeecHh
Confidence 56689999999 89999999999999999999996 99963 23455544
No 227
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=61.58 E-value=4.4 Score=32.48 Aligned_cols=13 Identities=38% Similarity=0.562 Sum_probs=11.5
Q ss_pred eEEEecCcccccC
Q 027701 4 LYALDFDGVICDS 16 (220)
Q Consensus 4 ~viFDlDGTLvDS 16 (220)
+|++|.||||.=|
T Consensus 1 VVvsDIDGTiT~S 13 (157)
T PF08235_consen 1 VVVSDIDGTITKS 13 (157)
T ss_pred CEEEeccCCcCcc
Confidence 4899999999877
No 228
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=61.35 E-value=26 Score=27.68 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=28.6
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHH---HHHH
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVE---TLLR 171 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~---~iL~ 171 (220)
...||+.++++ ++|+++.++|+.+...+. ..|+
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~ 65 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLS 65 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHH
Confidence 46799999999 889999999999988874 6666
No 229
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=59.39 E-value=3.7 Score=32.59 Aligned_cols=52 Identities=17% Similarity=0.080 Sum_probs=35.8
Q ss_pred ccCCCCCccHHHHHH--hCCCcEEEEcCC---chHH---HHHHHHHhhCCCCCCceEecCC
Q 027701 135 IGANRLYPGVSDALK--LASSRIYIVTSN---QSRF---VETLLRELAGVTITPDRLYGLG 187 (220)
Q Consensus 135 ~~~~~lypGv~elL~--~~g~~l~I~TnK---~~~~---a~~iL~~~~gl~~~f~~v~G~~ 187 (220)
+.+..+-|+..++++ -..+.+.|||.. |..+ .+=+++ .|.+-++-..|+++.
T Consensus 64 FRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E-~FPFi~~qn~vfCgn 123 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKE-KFPFISYQNIVFCGN 123 (180)
T ss_pred hhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHH-HCCCCChhhEEEecC
Confidence 345578899999999 677888998865 2222 233556 477767777787775
No 230
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=59.37 E-value=11 Score=33.50 Aligned_cols=44 Identities=25% Similarity=0.514 Sum_probs=34.6
Q ss_pred ccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--hhCCC
Q 027701 133 TWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVT 177 (220)
Q Consensus 133 ~~~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~--~~gl~ 177 (220)
-|. ...+-||+.|.|+ +.|.++.++||.+...-+..+++ ++|+.
T Consensus 33 lW~-g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 33 LWL-GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred eee-cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 355 5689999999999 88999999999988777777662 14554
No 231
>PTZ00445 p36-lilke protein; Provisional
Probab=58.59 E-value=4.2 Score=34.34 Aligned_cols=14 Identities=29% Similarity=0.301 Sum_probs=13.1
Q ss_pred CceEEEecCccccc
Q 027701 2 EDLYALDFDGVICD 15 (220)
Q Consensus 2 ~~~viFDlDGTLvD 15 (220)
+|+|++|||=||++
T Consensus 43 Ik~Va~D~DnTlI~ 56 (219)
T PTZ00445 43 IKVIASDFDLTMIT 56 (219)
T ss_pred CeEEEecchhhhhh
Confidence 58999999999999
No 232
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=57.38 E-value=1.3e+02 Score=26.04 Aligned_cols=91 Identities=14% Similarity=0.157 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHHHHhhcc--ccccccCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc-
Q 027701 111 NREALIELSGKVRDEWMDTD--FTTWIGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD- 181 (220)
Q Consensus 111 ~~e~~~~~~~~~r~~y~~~y--~~~~~~~~~lypGv~elL~------~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~- 181 (220)
+.+++.+....-|+.+-..+ .+-..+.-.|+|.+.++++ +.|+.+.-+++..-..++++.+ +|-+...-
T Consensus 74 ta~eAv~~a~lare~~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPl 151 (248)
T cd04728 74 TAEEAVRTARLAREALGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPL 151 (248)
T ss_pred CHHHHHHHHHHHHHHhCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCC
Confidence 45555555555566543221 1222345578999999999 5699888677777788888887 67663322
Q ss_pred -eEecCCCC-CcHHHHHHHHhhCC
Q 027701 182 -RLYGLGTG-PKVNVLKQLQKKPE 203 (220)
Q Consensus 182 -~v~G~~~~-pkp~~l~~~l~~~~ 203 (220)
.-+|+... .+|+.|..+.+..+
T Consensus 152 g~pIGsg~Gi~~~~~I~~I~e~~~ 175 (248)
T cd04728 152 GSPIGSGQGLLNPYNLRIIIERAD 175 (248)
T ss_pred CcCCCCCCCCCCHHHHHHHHHhCC
Confidence 44555433 47999988877643
No 233
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=56.08 E-value=19 Score=29.01 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=28.5
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE 172 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~ 172 (220)
+-|.+.+.|+ ++|++++|+|+++...+..+++.
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~ 53 (204)
T TIGR01484 18 LSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQ 53 (204)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHh
Confidence 4577778887 78899999999999999999984
No 234
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=55.55 E-value=36 Score=26.12 Aligned_cols=47 Identities=19% Similarity=0.159 Sum_probs=35.0
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchH---------------HHHHHHHHhhCCCCCCceEecC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSR---------------FVETLLRELAGVTITPDRLYGL 186 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~---------------~a~~iL~~~~gl~~~f~~v~G~ 186 (220)
..+-+++.+.|+ ++|+.+.++|+.+.. .+...|++ +++. |-..++|.
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k-~~ip-Yd~l~~~k 87 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ-HNVP-YDEIYVGK 87 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-cCCC-CceEEeCC
Confidence 457889999997 789999999999876 45567774 6774 34445565
No 235
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=54.95 E-value=24 Score=34.80 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=43.0
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCC-CcHHHHHHHHh
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQK 200 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~ 200 (220)
.+=||+.+.++ +.|+++.++|.-....+..+.++ +|++.++ ..-+. .|-+.++...+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v~----a~~~PedK~~~v~~lq~ 506 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDFI----AEATPEDKIALIRQEQA 506 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEEE----cCCCHHHHHHHHHHHHH
Confidence 55699999999 88999999999999999999996 9996433 32221 35566655433
No 236
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=54.75 E-value=25 Score=35.80 Aligned_cols=71 Identities=13% Similarity=0.126 Sum_probs=48.9
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCC-CCCcHHHHHHHHhhCCCCCCceEeccC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TGPKVNVLKQLQKKPEHQGLRLQRSTC 214 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~-~~pkp~~l~~~l~~~~~~~~~~~~~~~ 214 (220)
+|=|++.+.++ ++|+++.++|+-....+..+-++ +|+.. -..+.|.+ ..=..+-+.+++++. -+|+.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~-~~vi~G~el~~~~~~el~~~v~~~------~VfAr~ 621 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEP-GEPLLGTEIEAMDDAALAREVEER------TVFAKL 621 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCC-CCccchHhhhhCCHHHHHHHhhhC------CEEEEe
Confidence 56689999999 89999999999999999999996 99962 23444543 111223344444322 266666
Q ss_pred CCC
Q 027701 215 NPE 217 (220)
Q Consensus 215 ~~~ 217 (220)
+||
T Consensus 622 sPe 624 (903)
T PRK15122 622 TPL 624 (903)
T ss_pred CHH
Confidence 665
No 237
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=54.31 E-value=7.9 Score=33.67 Aligned_cols=17 Identities=24% Similarity=0.335 Sum_probs=14.7
Q ss_pred CceEEEecCcccccChH
Q 027701 2 EDLYALDFDGVICDSCE 18 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~ 18 (220)
+|.+++|||.||+-|.-
T Consensus 89 kk~lVLDLDeTLvHss~ 105 (262)
T KOG1605|consen 89 RKTLVLDLDETLVHSSL 105 (262)
T ss_pred CceEEEeCCCccccccc
Confidence 58899999999998874
No 238
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=54.27 E-value=29 Score=34.25 Aligned_cols=41 Identities=17% Similarity=0.218 Sum_probs=36.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITP 180 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f 180 (220)
++=||+.+.++ +.|+++.++|+-....+..+-++ +|++.+|
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~ 484 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFV 484 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEE
Confidence 56699999999 78999999999999999999996 9997544
No 239
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=54.01 E-value=35 Score=34.91 Aligned_cols=39 Identities=26% Similarity=0.444 Sum_probs=35.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~ 178 (220)
++=|++.+.++ ++|+++.++|+-....+..+-++ .|+..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~ 620 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILT 620 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCC
Confidence 56789999999 88999999999999999999996 99963
No 240
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=53.29 E-value=45 Score=34.41 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=34.7
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
+|=|++++.++ ++|+++.++|+.+...+..+.++ .|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 56789999999 89999999999999999999996 9984
No 241
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=51.49 E-value=31 Score=34.43 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=35.5
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~ 178 (220)
++=|++.+.++ ++|+++.++|+-....++.+-++ .|+..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~ 483 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGT 483 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCC
Confidence 56799999999 89999999999999999999996 99964
No 242
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=51.22 E-value=8.9 Score=31.20 Aligned_cols=13 Identities=23% Similarity=0.261 Sum_probs=11.9
Q ss_pred CceEEEecCcccc
Q 027701 2 EDLYALDFDGVIC 14 (220)
Q Consensus 2 ~~~viFDlDGTLv 14 (220)
.+.|++|||-|||
T Consensus 28 ikgvi~DlDNTLv 40 (175)
T COG2179 28 IKGVILDLDNTLV 40 (175)
T ss_pred CcEEEEeccCcee
Confidence 4799999999998
No 243
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=50.95 E-value=11 Score=31.64 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=19.5
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
-+++||.||||.=+...+.--+...++++
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~l 40 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQKL 40 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHHH
Confidence 38999999999877655544444444444
No 244
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=50.45 E-value=25 Score=23.84 Aligned_cols=29 Identities=21% Similarity=-0.004 Sum_probs=21.7
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
..-++||=|+.-+||+- +.-++.++++.+
T Consensus 24 es~iiFDNded~tdSa~-llp~ie~a~~~~ 52 (65)
T PF06117_consen 24 ESDIIFDNDEDKTDSAA-LLPAIEQARADV 52 (65)
T ss_pred CCCeeecCCCcccchHH-HHHHHHHHHHHH
Confidence 45799999999999987 445555555555
No 245
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=50.37 E-value=11 Score=33.26 Aligned_cols=17 Identities=12% Similarity=0.262 Sum_probs=14.0
Q ss_pred CceEEEecCcccccChH
Q 027701 2 EDLYALDFDGVICDSCE 18 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~ 18 (220)
+.+|+||||-||+.+..
T Consensus 122 phVIVfDlD~TLItd~~ 138 (297)
T PF05152_consen 122 PHVIVFDLDSTLITDEG 138 (297)
T ss_pred CcEEEEECCCcccccCC
Confidence 46899999999996643
No 246
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=50.24 E-value=8.8 Score=35.89 Aligned_cols=15 Identities=33% Similarity=0.547 Sum_probs=13.1
Q ss_pred CceEEEecCcccccC
Q 027701 2 EDLYALDFDGVICDS 16 (220)
Q Consensus 2 ~~~viFDlDGTLvDS 16 (220)
.+.|++|+||||.-|
T Consensus 375 ~kiVVsDiDGTITkS 389 (580)
T COG5083 375 KKIVVSDIDGTITKS 389 (580)
T ss_pred CcEEEEecCCcEEeh
Confidence 479999999999766
No 247
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=49.73 E-value=12 Score=34.21 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=31.7
Q ss_pred hCCCcEEEEcCCchHHHHHHHHHhhC--CCCCCceEecCCCC
Q 027701 150 LASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG 189 (220)
Q Consensus 150 ~~g~~l~I~TnK~~~~a~~iL~~~~g--l~~~f~~v~G~~~~ 189 (220)
++|.++.++||.|-.++..-+....| |..+||+|+-...|
T Consensus 254 ~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~K 295 (510)
T KOG2470|consen 254 DHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANK 295 (510)
T ss_pred HhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCC
Confidence 78999999999999999988884223 44889998875433
No 248
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=49.50 E-value=11 Score=32.50 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=13.8
Q ss_pred ceEEEecCcccccChH
Q 027701 3 DLYALDFDGVICDSCE 18 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~ 18 (220)
++++||+||||.+...
T Consensus 159 ~~~~~D~dgtl~~~~~ 174 (300)
T PHA02530 159 KAVIFDIDGTLAKMGG 174 (300)
T ss_pred CEEEEECCCcCcCCCC
Confidence 6899999999999753
No 249
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=49.24 E-value=52 Score=33.67 Aligned_cols=71 Identities=15% Similarity=0.279 Sum_probs=51.1
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc---eEecCC-CC-CcHHHHHHHHhhCCCCCCceE
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD---RLYGLG-TG-PKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~---~v~G~~-~~-pkp~~l~~~l~~~~~~~~~~~ 210 (220)
+|=|++++.++ ++|+++.++|+-....|..|-++ .|+..--. ++-|.+ .. .+. -+.+.+++.. +
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~-el~~~~~~~~------V 618 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDE-ELAELVEELS------V 618 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHH-HHHHHhhhCc------E
Confidence 56799999999 99999999999999999999996 99874432 444654 22 333 3334444332 7
Q ss_pred eccCCCC
Q 027701 211 RSTCNPE 217 (220)
Q Consensus 211 ~~~~~~~ 217 (220)
|.-++||
T Consensus 619 fARvsP~ 625 (917)
T COG0474 619 FARVSPE 625 (917)
T ss_pred EEEcCHH
Confidence 7777776
No 250
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=49.01 E-value=9.2 Score=31.39 Aligned_cols=17 Identities=29% Similarity=0.233 Sum_probs=14.8
Q ss_pred ceEEEecCcccccChHH
Q 027701 3 DLYALDFDGVICDSCEE 19 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~ 19 (220)
++++||-||||..--++
T Consensus 6 k~lflDRDGtin~d~~~ 22 (181)
T COG0241 6 KALFLDRDGTINIDKGD 22 (181)
T ss_pred cEEEEcCCCceecCCCc
Confidence 69999999999877775
No 251
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=48.39 E-value=36 Score=33.63 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=35.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTIT 179 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~ 179 (220)
.+=||+.+.++ +.|+++.++|+-....++.+-++ .|++.+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~v 487 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDF 487 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcEE
Confidence 45699999999 88999999999999999999996 999653
No 252
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=47.28 E-value=31 Score=28.56 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=32.0
Q ss_pred ccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 142 PGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 142 pGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
||+.+.|+ .+.+.++|-|+-....++.+++. +|+.
T Consensus 48 P~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~ 84 (195)
T TIGR02245 48 PYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVL 84 (195)
T ss_pred CCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hccc
Confidence 99999999 78999999999999999999995 8753
No 253
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=47.07 E-value=6.8 Score=27.34 Aligned_cols=10 Identities=40% Similarity=0.783 Sum_probs=8.7
Q ss_pred EEEecCcccc
Q 027701 5 YALDFDGVIC 14 (220)
Q Consensus 5 viFDlDGTLv 14 (220)
+=|||+|.|+
T Consensus 3 ~RFdf~G~l~ 12 (73)
T PF08620_consen 3 LRFDFDGNLL 12 (73)
T ss_pred ccccCCCCEe
Confidence 3499999999
No 254
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=46.94 E-value=45 Score=29.54 Aligned_cols=70 Identities=20% Similarity=0.274 Sum_probs=43.7
Q ss_pred CCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCCCCCCceEecC----C-------CCCc-H---HHHHH
Q 027701 137 ANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL----G-------TGPK-V---NVLKQ 197 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g-~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~----~-------~~pk-p---~~l~~ 197 (220)
.-+|||.+.|+++ +.| ++++|+||-..+ .+++. +. .+|.++=+ + ..|. + +-+.+
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslp---dv~~~-L~---~~dql~~sLdA~~~~~~~~InRP~~~~~~e~ile 162 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLP---DVLEE-LK---LPDQLYVSLDAPDEKTFRRINRPHKKDSWEKILE 162 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChH---HHHHH-hc---cCCEEEEEeccCCHHHHHHhcCCCCcchHHHHHH
Confidence 4589999999999 778 799999999984 44443 32 23444332 1 1153 2 44555
Q ss_pred HHhhCCCC-CCceEecc
Q 027701 198 LQKKPEHQ-GLRLQRST 213 (220)
Q Consensus 198 ~l~~~~~~-~~~~~~~~ 213 (220)
.++.+.-. ..+++..|
T Consensus 163 ~L~~~~~~~~~~~vir~ 179 (296)
T COG0731 163 GLEIFRSEYKGRTVIRT 179 (296)
T ss_pred HHHHhhhcCCCcEEEEE
Confidence 55555555 56666543
No 255
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=46.56 E-value=1.8e+02 Score=25.86 Aligned_cols=28 Identities=18% Similarity=0.360 Sum_probs=23.4
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCchH
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQSR 164 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~~~ 164 (220)
...+||.+.++++ ++|+.++|.||-...
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 3457899999999 789999999998653
No 256
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=45.95 E-value=22 Score=31.41 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=32.4
Q ss_pred CCCCCccHHHHHH---hC----CCcEEEEcCCc---h-HHHHHHHHHhhCCCCCCce
Q 027701 137 ANRLYPGVSDALK---LA----SSRIYIVTSNQ---S-RFVETLLRELAGVTITPDR 182 (220)
Q Consensus 137 ~~~lypGv~elL~---~~----g~~l~I~TnK~---~-~~a~~iL~~~~gl~~~f~~ 182 (220)
...++||+.|.|+ .+ |+++.++||.. . ..++.+.++ +|++.-.+.
T Consensus 14 g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~-lG~~~~~~~ 69 (321)
T TIGR01456 14 GKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSL-LGVDVSPLQ 69 (321)
T ss_pred CccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHH-cCCCCCHHH
Confidence 3467999999998 55 99999999986 3 345555574 887643333
No 257
>PRK00208 thiG thiazole synthase; Reviewed
Probab=45.40 E-value=2e+02 Score=24.85 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHHHHhhcc--ccccccCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc-
Q 027701 111 NREALIELSGKVRDEWMDTD--FTTWIGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPD- 181 (220)
Q Consensus 111 ~~e~~~~~~~~~r~~y~~~y--~~~~~~~~~lypGv~elL~------~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~- 181 (220)
+.+++.+....-|+.+-..+ .+-..+.-.++|.+.++++ +.|+.+.-+++..-..++++.+ +|-+...-
T Consensus 74 ta~eAv~~a~lare~~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPl 151 (250)
T PRK00208 74 TAEEAVRTARLAREALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPL 151 (250)
T ss_pred CHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCC
Confidence 45555555555666553321 1222345568999999999 5599888566667778888887 67763322
Q ss_pred -eEecCCCC-CcHHHHHHHHhhCC
Q 027701 182 -RLYGLGTG-PKVNVLKQLQKKPE 203 (220)
Q Consensus 182 -~v~G~~~~-pkp~~l~~~l~~~~ 203 (220)
..+|+... .+|+.+..+.+..+
T Consensus 152 g~pIGsg~gi~~~~~i~~i~e~~~ 175 (250)
T PRK00208 152 GAPIGSGLGLLNPYNLRIIIEQAD 175 (250)
T ss_pred CcCCCCCCCCCCHHHHHHHHHhcC
Confidence 44565433 46888888877644
No 258
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=44.29 E-value=1.6e+02 Score=24.56 Aligned_cols=61 Identities=15% Similarity=-0.034 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHHHHHHHhhcccccc---ccCCCCCcc-HHHHHH---hCCCcEEEEcCC--chHHHHHHHH
Q 027701 110 ENREALIELSGKVRDEWMDTDFTTW---IGANRLYPG-VSDALK---LASSRIYIVTSN--QSRFVETLLR 171 (220)
Q Consensus 110 ~~~e~~~~~~~~~r~~y~~~y~~~~---~~~~~lypG-v~elL~---~~g~~l~I~TnK--~~~~a~~iL~ 171 (220)
++.+++.+.+.+.+.+|...- .+. .....+++. +.++++ +.|+.++|.||- +.+..+.++.
T Consensus 19 ~t~eel~~~~~~~~~f~~~sg-gGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~ 88 (213)
T PRK10076 19 ITLDALEREVMKDDIFFRTSG-GGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAK 88 (213)
T ss_pred cCHHHHHHHHHhhhHhhcCCC-CEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 566777677777777774310 011 112346676 678888 889999999997 5566666766
No 259
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=44.18 E-value=1.1e+02 Score=26.19 Aligned_cols=76 Identities=18% Similarity=0.206 Sum_probs=51.4
Q ss_pred ccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH--hhCCCCCCce------E-----ecC-C------------CC-Cc
Q 027701 142 PGVSDALK---LASSRIYIVTSNQSRFVETLLRE--LAGVTITPDR------L-----YGL-G------------TG-PK 191 (220)
Q Consensus 142 pGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~--~~gl~~~f~~------v-----~G~-~------------~~-pk 191 (220)
+.++++++ ++|+++..+|.-+..+....+++ .+|++.--.. + ... . .+ +|
T Consensus 84 ~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~K 163 (252)
T PF11019_consen 84 SDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDK 163 (252)
T ss_pred hhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCcc
Confidence 45555555 89999999999877665554442 1577622111 0 011 1 11 78
Q ss_pred HHHHHHHHhhCCCCCCceEeccCCCC
Q 027701 192 VNVLKQLQKKPEHQGLRLQRSTCNPE 217 (220)
Q Consensus 192 p~~l~~~l~~~~~~~~~~~~~~~~~~ 217 (220)
-++|..++...|..|+.++|=.-+++
T Consensus 164 G~~L~~fL~~~~~~pk~IIfIDD~~~ 189 (252)
T PF11019_consen 164 GEVLKYFLDKINQSPKKIIFIDDNKE 189 (252)
T ss_pred HHHHHHHHHHcCCCCCeEEEEeCCHH
Confidence 89999999999999999999776654
No 260
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=43.85 E-value=40 Score=28.75 Aligned_cols=60 Identities=15% Similarity=0.054 Sum_probs=43.1
Q ss_pred hCCCcEEEE---cCCchHHHHHHHHHhhCCC----CCCceEecCCCCCcHHHHHHHHhhCCCCC-CceEec
Q 027701 150 LASSRIYIV---TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLQRS 212 (220)
Q Consensus 150 ~~g~~l~I~---TnK~~~~a~~iL~~~~gl~----~~f~~v~G~~~~pkp~~l~~~l~~~~~~~-~~~~~~ 212 (220)
..++...++ |++....+...++. +++. .++..|.+.. .|...+.++++.++.++ +++++-
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~ 213 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIAL 213 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEE
Confidence 334554444 77777777888874 7775 4555666655 57888999999999999 888764
No 261
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=43.80 E-value=1.6e+02 Score=27.30 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHHHHHHhhccc-ccc--ccCCCCCccHHHHHH---hCCCcEEEE-cCC----chHHHHHHHHHhhCCCC
Q 027701 110 ENREALIELSGKVRDEWMDTDF-TTW--IGANRLYPGVSDALK---LASSRIYIV-TSN----QSRFVETLLRELAGVTI 178 (220)
Q Consensus 110 ~~~e~~~~~~~~~r~~y~~~y~-~~~--~~~~~lypGv~elL~---~~g~~l~I~-TnK----~~~~a~~iL~~~~gl~~ 178 (220)
++.+++.+.+.+...+|..... -.+ ......||.+.++|+ +.|++++|. ||- ..+.++++++ +|++.
T Consensus 54 ~t~~evl~ev~~d~~~~~~~~ggVtisGGGepl~~~~l~eLl~~lk~~gi~taI~~TnG~~l~~~e~~~~L~~--~gld~ 131 (404)
T TIGR03278 54 IPPQVVLGEVQTSLGFRTGRDTKVTISGGGDVSCYPELEELTKGLSDLGLPIHLGYTSGKGFDDPEIAEFLID--NGVRE 131 (404)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCHHHHHHHHHHHhCCCCEEEeCCCCcccCCHHHHHHHHH--cCCCE
Confidence 4566666666666666632100 001 113457899999999 679999996 883 5567788877 57764
Q ss_pred CCceEecCC-------CC-CcHHHHHHHHhhCCC
Q 027701 179 TPDRLYGLG-------TG-PKVNVLKQLQKKPEH 204 (220)
Q Consensus 179 ~f~~v~G~~-------~~-pkp~~l~~~l~~~~~ 204 (220)
..-.|-+.+ .+ |.++.+++.++.+..
T Consensus 132 v~iSvka~dpe~h~kl~G~~~a~~ILe~L~~L~e 165 (404)
T TIGR03278 132 VSFTVFATDPELRREWMKDPTPEASLQCLRRFCE 165 (404)
T ss_pred EEEecccCCHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 322233333 11 555666666665543
No 262
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=43.62 E-value=12 Score=33.78 Aligned_cols=17 Identities=12% Similarity=0.282 Sum_probs=13.9
Q ss_pred CceEEEecCcccccChH
Q 027701 2 EDLYALDFDGVICDSCE 18 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~ 18 (220)
++++-||+|.||+-=-.
T Consensus 12 i~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 12 IQVFGFDMDYTLAQYKS 28 (343)
T ss_pred CCEEEECccccccccCh
Confidence 48999999999996433
No 263
>PLN02887 hydrolase family protein
Probab=43.00 E-value=57 Score=31.61 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=32.8
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
++-+...+.|+ ++|++++|+|+++...+..+++. +++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKM-VDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCcc
Confidence 45677778887 89999999999999999999995 8875
No 264
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=42.23 E-value=1.5e+02 Score=25.58 Aligned_cols=91 Identities=14% Similarity=0.169 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHHHHhhcc--ccccccCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCce
Q 027701 111 NREALIELSGKVRDEWMDTD--FTTWIGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTITPDR 182 (220)
Q Consensus 111 ~~e~~~~~~~~~r~~y~~~y--~~~~~~~~~lypGv~elL~------~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~ 182 (220)
+.++..+....-|+.+-..+ .+-..+.-.|+|...|+|+ +.|+.+.--+|-.-..++++.+ .|-. .-.
T Consensus 74 tA~EAv~~A~laRe~~~t~wIKLEVi~D~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~d--~Gca--avM 149 (247)
T PF05690_consen 74 TAEEAVRTARLAREAFGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLED--AGCA--AVM 149 (247)
T ss_dssp SHHHHHHHHHHHHHTTS-SEEEE--BS-TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHHH--TT-S--EBE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--CCCC--EEE
Confidence 55555555555666553322 1223445678999999999 8999999999999999999888 5753 111
Q ss_pred EecC----CCC-CcHHHHHHHHhhCCCC
Q 027701 183 LYGL----GTG-PKVNVLKQLQKKPEHQ 205 (220)
Q Consensus 183 v~G~----~~~-pkp~~l~~~l~~~~~~ 205 (220)
-.|+ ..+ -.|..|+.++++.+++
T Consensus 150 PlgsPIGSg~Gi~n~~~l~~i~~~~~vP 177 (247)
T PF05690_consen 150 PLGSPIGSGRGIQNPYNLRIIIERADVP 177 (247)
T ss_dssp EBSSSTTT---SSTHHHHHHHHHHGSSS
T ss_pred ecccccccCcCCCCHHHHHHHHHhcCCc
Confidence 2233 223 6789999999887654
No 265
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=41.76 E-value=46 Score=32.95 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=31.8
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCC
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTI 178 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~ 178 (220)
.++-..+.|+ ++|++++|+|+++...+..+++. +|+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~-Lgl~~ 474 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE-LGIKD 474 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 4566667777 88999999999999999999995 88753
No 266
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=40.00 E-value=97 Score=29.22 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=14.7
Q ss_pred HHHHHHHhhCCCCCCceEeccCC
Q 027701 193 NVLKQLQKKPEHQGLRLQRSTCN 215 (220)
Q Consensus 193 ~~l~~~l~~~~~~~~~~~~~~~~ 215 (220)
++|..+.+.+ -+.-.++||||+
T Consensus 223 ~iL~~A~~~L-kpGG~LVYSTCT 244 (470)
T PRK11933 223 ELIESAFHAL-KPGGTLVYSTCT 244 (470)
T ss_pred HHHHHHHHHc-CCCcEEEEECCC
Confidence 4444555544 246799999997
No 267
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=38.81 E-value=58 Score=32.42 Aligned_cols=57 Identities=21% Similarity=0.408 Sum_probs=44.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHH
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQ 199 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l 199 (220)
++=|+..+.++ +.|+++.++|+-.+..++.+-++ +||+.++..+.- .-|.+.++++-
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~AellP---edK~~~V~~l~ 596 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAELLP---EDKAEIVRELQ 596 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccCCc---HHHHHHHHHHH
Confidence 56789999998 89999999999999999999996 999654443311 13566666655
No 268
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=38.62 E-value=1.3e+02 Score=20.78 Aligned_cols=54 Identities=11% Similarity=0.259 Sum_probs=38.6
Q ss_pred CCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCCCceEe
Q 027701 152 SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLQR 211 (220)
Q Consensus 152 g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~~~~~~ 211 (220)
++.+.|--||.-+.+-.+++. +|+ ..|-|+.++.-...++++++.+. +...+.+
T Consensus 11 ~~~~lvS~s~DGe~ia~~~~~-~G~----~~iRGSs~rgg~~Alr~~~~~lk-~G~~~~i 64 (74)
T PF04028_consen 11 KIAALVSRSRDGELIARVLER-FGF----RTIRGSSSRGGARALREMLRALK-EGYSIAI 64 (74)
T ss_pred CEEEEEccCcCHHHHHHHHHH-cCC----CeEEeCCCCcHHHHHHHHHHHHH-CCCeEEE
Confidence 344445557888999999995 986 67999887777778888888776 3334433
No 269
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=38.28 E-value=40 Score=28.94 Aligned_cols=38 Identities=5% Similarity=0.085 Sum_probs=31.7
Q ss_pred CCCCccHHHHHH---h-CCCcEEEEcCCchHHHHHHHHHhhCC
Q 027701 138 NRLYPGVSDALK---L-ASSRIYIVTSNQSRFVETLLRELAGV 176 (220)
Q Consensus 138 ~~lypGv~elL~---~-~g~~l~I~TnK~~~~a~~iL~~~~gl 176 (220)
..+-|.+.+.|+ + .|+.++|+|+.+...+..+++. +++
T Consensus 35 ~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~-~~~ 76 (266)
T PRK10187 35 VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKP-YRF 76 (266)
T ss_pred ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCc-ccc
Confidence 467788999888 4 6999999999999999988874 553
No 270
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=36.16 E-value=1.3e+02 Score=31.67 Aligned_cols=39 Identities=15% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
-+|=+||+|.++ ++|+|+-|.|+-..+.|..|--. .++-
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s-C~Ll 691 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS-CRLL 691 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh-hcCC
Confidence 478899999999 99999999999999999888774 6553
No 271
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=36.05 E-value=20 Score=25.32 Aligned_cols=15 Identities=33% Similarity=0.357 Sum_probs=12.5
Q ss_pred eEEEecCcccccChH
Q 027701 4 LYALDFDGVICDSCE 18 (220)
Q Consensus 4 ~viFDlDGTLvDS~~ 18 (220)
.++++=|||.||+-+
T Consensus 42 ~lvL~eDGTeVddEe 56 (78)
T cd01615 42 TLVLEEDGTEVDDEE 56 (78)
T ss_pred EEEEeCCCcEEccHH
Confidence 478899999999854
No 272
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=35.81 E-value=1.6e+02 Score=30.18 Aligned_cols=42 Identities=26% Similarity=0.434 Sum_probs=36.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPD 181 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~ 181 (220)
+|=|+|.+.++ ++|+++.++|+-....|+.|.++ .|+...-+
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~e 628 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDE 628 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCc
Confidence 56688998888 99999999999999999999996 99865444
No 273
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=35.15 E-value=19 Score=30.07 Aligned_cols=19 Identities=16% Similarity=0.044 Sum_probs=14.4
Q ss_pred ceEEEecCcccccChHHHH
Q 027701 3 DLYALDFDGVICDSCEETA 21 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~ 21 (220)
+.|-||||||+.----++.
T Consensus 59 ~~v~~D~~GT~m~iPYGYL 77 (271)
T PF06901_consen 59 HTVTFDFQGTKMVIPYGYL 77 (271)
T ss_pred eeEEEeccceEEEeechhh
Confidence 6789999999876544444
No 274
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=33.90 E-value=23 Score=24.78 Aligned_cols=15 Identities=40% Similarity=0.505 Sum_probs=12.2
Q ss_pred eEEEecCcccccChH
Q 027701 4 LYALDFDGVICDSCE 18 (220)
Q Consensus 4 ~viFDlDGTLvDS~~ 18 (220)
.++++=|||.||+-+
T Consensus 40 ~l~L~eDGT~VddEe 54 (74)
T smart00266 40 TLVLEEDGTIVDDEE 54 (74)
T ss_pred EEEEecCCcEEccHH
Confidence 467889999999854
No 275
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=33.34 E-value=1.2e+02 Score=27.82 Aligned_cols=76 Identities=17% Similarity=0.060 Sum_probs=54.9
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCc-eEecCCCC----CcHHHHHHHHhhCCCCCCceE
Q 027701 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLRELAGVTITPD-RLYGLGTG----PKVNVLKQLQKKPEHQGLRLQ 210 (220)
Q Consensus 138 ~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~-~v~G~~~~----pkp~~l~~~l~~~~~~~~~~~ 210 (220)
.+-=|||.-.|. .+.+.+.|.|+-..-.+..+++. +.-..+.. .++++.++ +| .+=+..+|...++++
T Consensus 213 f~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~-lDP~g~IsYkLfr~~t~y~~G~H----vKdls~LNRdl~kVi 287 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDA-LDPKGYISYKLFRGATKYEEGHH----VKDLSKLNRDLQKVI 287 (393)
T ss_pred eccCchHHHHHHhhcccceEEEEecCCccchhhhHhh-cCCcceEEEEEecCcccccCccc----hhhhhhhccccceeE
Confidence 345589999999 78899999999999999999996 54333332 23444432 33 122566788999999
Q ss_pred eccCCCCC
Q 027701 211 RSTCNPEE 218 (220)
Q Consensus 211 ~~~~~~~~ 218 (220)
+-.|++.+
T Consensus 288 vVd~d~~~ 295 (393)
T KOG2832|consen 288 VVDFDANS 295 (393)
T ss_pred EEEccccc
Confidence 99998764
No 276
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=32.85 E-value=25 Score=25.07 Aligned_cols=15 Identities=33% Similarity=0.417 Sum_probs=12.5
Q ss_pred eEEEecCcccccChH
Q 027701 4 LYALDFDGVICDSCE 18 (220)
Q Consensus 4 ~viFDlDGTLvDS~~ 18 (220)
.++++=|||.|||-+
T Consensus 41 ~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 41 TLVLEEDGTAVDSED 55 (81)
T ss_pred EEEEecCCCEEccHH
Confidence 467899999999854
No 277
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=32.74 E-value=24 Score=33.51 Aligned_cols=13 Identities=23% Similarity=0.468 Sum_probs=11.6
Q ss_pred CceEEEecCcccc
Q 027701 2 EDLYALDFDGVIC 14 (220)
Q Consensus 2 ~~~viFDlDGTLv 14 (220)
+|++++|||+||.
T Consensus 222 kK~LVLDLDNTLW 234 (574)
T COG3882 222 KKALVLDLDNTLW 234 (574)
T ss_pred cceEEEecCCccc
Confidence 4899999999996
No 278
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=32.53 E-value=24 Score=24.97 Aligned_cols=14 Identities=36% Similarity=0.413 Sum_probs=11.5
Q ss_pred EEEecCcccccChH
Q 027701 5 YALDFDGVICDSCE 18 (220)
Q Consensus 5 viFDlDGTLvDS~~ 18 (220)
++++=|||.||+-+
T Consensus 43 lvL~eDGT~VddEe 56 (78)
T PF02017_consen 43 LVLEEDGTEVDDEE 56 (78)
T ss_dssp EEETTTTCBESSCH
T ss_pred EEEeCCCcEEccHH
Confidence 57788999999754
No 279
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=32.21 E-value=25 Score=24.96 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=12.2
Q ss_pred eEEEecCcccccChH
Q 027701 4 LYALDFDGVICDSCE 18 (220)
Q Consensus 4 ~viFDlDGTLvDS~~ 18 (220)
-++++=|||.||+-+
T Consensus 44 ~lvL~eDGT~VddEe 58 (80)
T cd06536 44 TLVLAEDGTIVEDED 58 (80)
T ss_pred EEEEecCCcEEccHH
Confidence 467899999999854
No 280
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=31.76 E-value=27 Score=24.72 Aligned_cols=15 Identities=33% Similarity=0.507 Sum_probs=12.3
Q ss_pred eEEEecCcccccChH
Q 027701 4 LYALDFDGVICDSCE 18 (220)
Q Consensus 4 ~viFDlDGTLvDS~~ 18 (220)
.++++=|||.||+-+
T Consensus 42 ~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 42 TLVLEEDGTVVDTEE 56 (78)
T ss_pred EEEEeCCCCEEccHH
Confidence 467899999999854
No 281
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=31.36 E-value=3.5e+02 Score=23.43 Aligned_cols=93 Identities=15% Similarity=0.147 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHHHHHhhcc--ccccccCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCCC--CC
Q 027701 111 NREALIELSGKVRDEWMDTD--FTTWIGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVTI--TP 180 (220)
Q Consensus 111 ~~e~~~~~~~~~r~~y~~~y--~~~~~~~~~lypGv~elL~------~~g~~l~I~TnK~~~~a~~iL~~~~gl~~--~f 180 (220)
+.++......--|+.+...| .+-+.+.-.|+|...|+|+ +.|+.+.--||-.--.++++.+ .|-.- ..
T Consensus 81 taeEAv~tArlARE~~~t~wiKlEVi~d~~tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLee--~GcaavMPl 158 (262)
T COG2022 81 TAEEAVRTARLAREALGTNWIKLEVIGDEKTLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLEE--AGCAAVMPL 158 (262)
T ss_pred CHHHHHHHHHHHHHHccCCeEEEEEecCCcccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHHh--cCceEeccc
Confidence 34444444444455443221 1233455679999999999 8899999999999999999888 46431 11
Q ss_pred ceEecCCCC-CcHHHHHHHHhhCCCC
Q 027701 181 DRLYGLGTG-PKVNVLKQLQKKPEHQ 205 (220)
Q Consensus 181 ~~v~G~~~~-pkp~~l~~~l~~~~~~ 205 (220)
..=+|+.-+ -.|..|+-++++..++
T Consensus 159 ~aPIGSg~G~~n~~~l~iiie~a~VP 184 (262)
T COG2022 159 GAPIGSGLGLQNPYNLEIIIEEADVP 184 (262)
T ss_pred cccccCCcCcCCHHHHHHHHHhCCCC
Confidence 122344433 6788888888887654
No 282
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=31.31 E-value=1.9e+02 Score=25.79 Aligned_cols=24 Identities=17% Similarity=0.055 Sum_probs=21.9
Q ss_pred CCcHHHHHHHHhhCCCCCCceEec
Q 027701 189 GPKVNVLKQLQKKPEHQGLRLQRS 212 (220)
Q Consensus 189 ~pkp~~l~~~l~~~~~~~~~~~~~ 212 (220)
||.+.+...++++.++.+++++|-
T Consensus 224 KP~~~m~~~l~~~~~i~psRt~mv 247 (306)
T KOG2882|consen 224 KPSTFMFEYLLEKFNIDPSRTCMV 247 (306)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEE
Confidence 488999999999999999999984
No 283
>PF03387 Herpes_UL46: Herpesvirus UL46 protein; InterPro: IPR005051 The UL46 protein (VP11/12) is produced in the late phase of Herpes virus infection in a manner highly dependent on viral DNA synthesis, and is mainly distributed at the edge of the nucleus in the cytoplasm. It is a tegument phosphoprotein reported to modulate the activity of UL48 (anti-TNF) protein.; GO: 0006355 regulation of transcription, DNA-dependent
Probab=31.29 E-value=4e+02 Score=25.04 Aligned_cols=100 Identities=20% Similarity=0.121 Sum_probs=63.1
Q ss_pred cCcccccChHHHHHHHHHHHHHh-CCCCCCCCCchhhhHHhhhhcccccccccchhHHHHHHHHHhcccccccccccccC
Q 027701 9 FDGVICDSCEETALSAVKAARVR-WPSLFDGVDSALEDWIVDQMHTLRPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEG 87 (220)
Q Consensus 9 lDGTLvDS~~~i~~s~~~a~~~~-~~~~~~g~~~~~~~~~~~~~~~ir~~Ig~G~~~~~~~~~l~~~~~~~~~~~~~~~~ 87 (220)
.+|-|+.+-.++..|+-.|+++. -...|.++-.. .....+...-.+....-++...+. +
T Consensus 16 ~~gClLptp~~~~~aAv~AL~~~ae~~~p~~L~~~------~R~~~L~~~~~N~VPEs~Iv~~~~--------------~ 75 (444)
T PF03387_consen 16 EKGCLLPTPEDLLEAAVRALRDRAEEVLPAGLFSA------DRASALAARRDNTVPESLIVRCVA--------------G 75 (444)
T ss_pred cCceecCCchhHHHHHHHHHHHHHHhcCCcccccH------HHHHHHhcCCCCCCChHHHHHhhc--------------c
Confidence 47999999999999999999887 21112233221 122333333345555544444432 3
Q ss_pred cchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhh
Q 027701 88 LTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMD 128 (220)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~ 128 (220)
...+++...|.......++.-+++...+.+.+..-+-.|..
T Consensus 76 D~~~eY~r~Y~~a~k~~l~~~~ls~~~v~r~~~a~YwkyL~ 116 (444)
T PF03387_consen 76 DTNGEYRRHYDAAAKRRLARAGLSRDAVWRAYLASYWKYLQ 116 (444)
T ss_pred CchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 34678888888888888888899999888876544444443
No 284
>smart00497 IENR1 Intron encoded nuclease repeat motif. Repeat of unknown function, but possibly DNA-binding via helix-turn-helix motif (Ponting, unpublished).
Probab=30.55 E-value=36 Score=21.08 Aligned_cols=25 Identities=28% Similarity=0.414 Sum_probs=18.2
Q ss_pred ceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 3 DLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 3 ~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
.+.++|.||+++...+ |+..|.+.+
T Consensus 3 ~V~~~d~~~~~i~~f~----S~~eAa~~l 27 (53)
T smart00497 3 PVYVYDLDGNLIGEFS----SIREAAKYL 27 (53)
T ss_pred cEEEEeCCCCEEEEec----CHHHHHHHh
Confidence 5788999999987554 455555666
No 285
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=30.00 E-value=23 Score=30.78 Aligned_cols=22 Identities=23% Similarity=0.267 Sum_probs=16.1
Q ss_pred hCCCcEEEEcCCchHHHHHHHH
Q 027701 150 LASSRIYIVTSNQSRFVETLLR 171 (220)
Q Consensus 150 ~~g~~l~I~TnK~~~~a~~iL~ 171 (220)
..-++++|||..+...-+++++
T Consensus 184 ~~piRtalVTAR~apah~RvI~ 205 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIR 205 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHH
Confidence 3567999999877666666655
No 286
>PF07453 NUMOD1: NUMOD1 domain; InterPro: IPR010896 This helix-turn-helix-containing DNA-binding domain is found associated in homing nucleases [].
Probab=29.85 E-value=36 Score=19.80 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=18.5
Q ss_pred CceEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 2 EDLYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 2 ~~~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
+++.++|+||..+-+.+-+. .|.+.+
T Consensus 1 k~V~~yd~~~~~i~~F~Si~----eAa~~l 26 (37)
T PF07453_consen 1 KPVYVYDLNTNEIKSFDSIR----EAARYL 26 (37)
T ss_pred CeEEEEECCCCeEEEEcCHH----HHHHHh
Confidence 35789999999986666554 444566
No 287
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=29.53 E-value=1.2e+02 Score=23.71 Aligned_cols=40 Identities=10% Similarity=0.074 Sum_probs=31.7
Q ss_pred CCCCCccHHHHHH---hCCCcEEEEcCCc-hHHHHHHHHHhhCCC
Q 027701 137 ANRLYPGVSDALK---LASSRIYIVTSNQ-SRFVETLLRELAGVT 177 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g~~l~I~TnK~-~~~a~~iL~~~~gl~ 177 (220)
....|+.+.-.|. ++|+.+++||+-. ...+...|+. +.+.
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~-fkvk 85 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLET-FKVK 85 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHH-hccC
Confidence 3568999988888 9999999999865 4567888884 7664
No 288
>PTZ00174 phosphomannomutase; Provisional
Probab=28.89 E-value=98 Score=25.97 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=27.4
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHH
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLR 171 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~ 171 (220)
++-|...+.|+ ++|++++|+|+.+...+...++
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 45567778888 8999999999999988877776
No 289
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=28.83 E-value=86 Score=32.67 Aligned_cols=38 Identities=13% Similarity=0.201 Sum_probs=35.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
+|-||+.+.++ ++|+++.++|+-....+..+-++ .|+.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~ 686 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGII 686 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCC
Confidence 56799999999 89999999999999999999996 9995
No 290
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=28.39 E-value=2.2e+02 Score=24.51 Aligned_cols=67 Identities=19% Similarity=0.293 Sum_probs=41.2
Q ss_pred hhhhhhHHHHHhhcCCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHH
Q 027701 96 NWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRE 172 (220)
Q Consensus 96 ~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~ 172 (220)
.|-.....+....+++.+++.+++.. ....+=+|+.++++ +.++|+.|.|.--.+.++.+|++
T Consensus 61 EWw~kah~llv~~~l~k~~i~~~V~~--------------s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q 126 (246)
T PF05822_consen 61 EWWTKAHELLVEQGLTKSEIEEAVKE--------------SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ 126 (246)
T ss_dssp HHHHHHHHHHHHHT-BGGGHHHHHHC--------------S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcCHHHHHHHHHh--------------cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH
Confidence 33333334444556666655555441 23456688888888 89999999999999999999996
Q ss_pred hhCCC
Q 027701 173 LAGVT 177 (220)
Q Consensus 173 ~~gl~ 177 (220)
.|..
T Consensus 127 -~~~~ 130 (246)
T PF05822_consen 127 -AGVF 130 (246)
T ss_dssp -TT--
T ss_pred -cCCC
Confidence 6653
No 291
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=28.32 E-value=98 Score=28.98 Aligned_cols=38 Identities=16% Similarity=0.331 Sum_probs=34.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGV 176 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl 176 (220)
..+.|++.++++ ++|+++.++|......+..+-+. +|+
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi 386 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI 386 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc
Confidence 478899999999 88999999999999999999995 886
No 292
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=27.93 E-value=29 Score=32.10 Aligned_cols=13 Identities=15% Similarity=0.307 Sum_probs=0.0
Q ss_pred CceEEEecCcccc
Q 027701 2 EDLYALDFDGVIC 14 (220)
Q Consensus 2 ~~~viFDlDGTLv 14 (220)
+.+|-||+|+||+
T Consensus 27 i~~~GfdmDyTL~ 39 (424)
T KOG2469|consen 27 IGIVGFDMDYTLA 39 (424)
T ss_pred CcEEeeccccchh
No 293
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=27.63 E-value=1e+02 Score=26.47 Aligned_cols=52 Identities=25% Similarity=0.102 Sum_probs=38.9
Q ss_pred CchHHHHHHHHHhhCCCCCCceEecCCC---CCcHHHHHHHHhhCCCCCCceEeccCCC
Q 027701 161 NQSRFVETLLRELAGVTITPDRLYGLGT---GPKVNVLKQLQKKPEHQGLRLQRSTCNP 216 (220)
Q Consensus 161 K~~~~a~~iL~~~~gl~~~f~~v~G~~~---~pkp~~l~~~l~~~~~~~~~~~~~~~~~ 216 (220)
-....++.+.. .| ..||+|++.+. -|+|+.+...|.++=-+...+++||-|-
T Consensus 110 y~~~~~edl~~--~~--~~FDvV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~STinr 164 (243)
T COG2227 110 YRQATVEDLAS--AG--GQFDVVTCMEVLEHVPDPESFLRACAKLVKPGGILFLSTINR 164 (243)
T ss_pred chhhhHHHHHh--cC--CCccEEEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEecccc
Confidence 34444555554 23 57999999873 3999999999998877889999999874
No 294
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=27.40 E-value=4.6e+02 Score=23.60 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=60.5
Q ss_pred CHHHHHHHHHHHHHHHhhcc--ccccccCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCCC--CCC
Q 027701 111 NREALIELSGKVRDEWMDTD--FTTWIGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGVT--ITP 180 (220)
Q Consensus 111 ~~e~~~~~~~~~r~~y~~~y--~~~~~~~~~lypGv~elL~------~~g~~l~I~TnK~~~~a~~iL~~~~gl~--~~f 180 (220)
+.+++.+...--|+.+-..+ .+-..+.-.++|.+.++++ +.|+.+.++++..-..++++.+ +|-. ...
T Consensus 148 ta~eAv~~a~lare~~~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~avmPl 225 (326)
T PRK11840 148 TAEEAVRTLRLAREAGGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVAVMPL 225 (326)
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEEEeec
Confidence 56666666666676543221 1222444578999999999 5699997888888888888887 5642 011
Q ss_pred ceEecCCCC-CcHHHHHHHHhhCC
Q 027701 181 DRLYGLGTG-PKVNVLKQLQKKPE 203 (220)
Q Consensus 181 ~~v~G~~~~-pkp~~l~~~l~~~~ 203 (220)
...+|+... .+|+.|..+.+...
T Consensus 226 ~~pIGsg~gv~~p~~i~~~~e~~~ 249 (326)
T PRK11840 226 GAPIGSGLGIQNPYTIRLIVEGAT 249 (326)
T ss_pred cccccCCCCCCCHHHHHHHHHcCC
Confidence 334454433 69999999998743
No 295
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=26.76 E-value=36 Score=24.14 Aligned_cols=15 Identities=40% Similarity=0.366 Sum_probs=12.4
Q ss_pred eEEEecCcccccChH
Q 027701 4 LYALDFDGVICDSCE 18 (220)
Q Consensus 4 ~viFDlDGTLvDS~~ 18 (220)
.++++=|||.||+-+
T Consensus 41 ~lvL~eDGT~Vd~Ee 55 (79)
T cd06538 41 SLVLDEDGTGVDTEE 55 (79)
T ss_pred EEEEecCCcEEccHH
Confidence 377899999999854
No 296
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=25.96 E-value=33 Score=30.97 Aligned_cols=27 Identities=30% Similarity=0.326 Sum_probs=21.2
Q ss_pred eEEEecCcccccChHHHHHHHHHHHHHh
Q 027701 4 LYALDFDGVICDSCEETALSAVKAARVR 31 (220)
Q Consensus 4 ~viFDlDGTLvDS~~~i~~s~~~a~~~~ 31 (220)
.++||.||+|+=.-.-|..+. .||+.+
T Consensus 37 gfafDIDGVL~RG~~~i~~~~-~Alr~L 63 (389)
T KOG1618|consen 37 GFAFDIDGVLFRGHRPIPGAL-KALRRL 63 (389)
T ss_pred eEEEecccEEEecCCCCcchH-HHHHHH
Confidence 689999999998877766655 566666
No 297
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=24.73 E-value=2.1e+02 Score=29.38 Aligned_cols=58 Identities=17% Similarity=0.311 Sum_probs=45.2
Q ss_pred CCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCCCCCceEecCCCC-CcHHHHHHHHhh
Q 027701 139 RLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKK 201 (220)
Q Consensus 139 ~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~~~f~~v~G~~~~-pkp~~l~~~l~~ 201 (220)
++=||+...+. ..|+++.++|+-....++.+-++ .| ++.|++.-.. .|.+.++++-++
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~ 784 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKN 784 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhc
Confidence 45577777776 88999999999999999999996 88 5667765432 567777777664
No 298
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=24.04 E-value=4.9e+02 Score=22.74 Aligned_cols=93 Identities=14% Similarity=0.111 Sum_probs=60.5
Q ss_pred CHHHHHHHHHHHHHHHh------hcc--ccccccCCCCCccHHHHHH------hCCCcEEEEcCCchHHHHHHHHHhhCC
Q 027701 111 NREALIELSGKVRDEWM------DTD--FTTWIGANRLYPGVSDALK------LASSRIYIVTSNQSRFVETLLRELAGV 176 (220)
Q Consensus 111 ~~e~~~~~~~~~r~~y~------~~y--~~~~~~~~~lypGv~elL~------~~g~~l~I~TnK~~~~a~~iL~~~~gl 176 (220)
+.+++.+...--|+.+. ..+ .+-..+.-.++|...|+|+ +.|+.+.--||-.-..++++.+ .|-
T Consensus 82 tA~EAv~~A~laRe~~~~~~~~~~~wIKLEVi~D~~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed--~Gc 159 (267)
T CHL00162 82 TAEEAIRMAFLGRELAKQLGQEDNNFVKLEVISDPKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLED--IGC 159 (267)
T ss_pred CHHHHHHHHHHHHHHhccccccCCCeEEEEEeCCCcccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--cCC
Confidence 45555555555566541 111 1222345679999999999 8899999999999999998887 565
Q ss_pred CC--CCceEecCCCC-CcHHHHHHHHhhCCCC
Q 027701 177 TI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQ 205 (220)
Q Consensus 177 ~~--~f~~v~G~~~~-pkp~~l~~~l~~~~~~ 205 (220)
.- ....=+|+..+ ..|..|+.+++...++
T Consensus 160 ~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~vp 191 (267)
T CHL00162 160 ATVMPLGSPIGSGQGLQNLLNLQIIIENAKIP 191 (267)
T ss_pred eEEeeccCcccCCCCCCCHHHHHHHHHcCCCc
Confidence 31 11112233333 6888898888876543
No 299
>PLN02580 trehalose-phosphatase
Probab=23.93 E-value=1e+02 Score=28.29 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=29.3
Q ss_pred CCCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHH
Q 027701 137 ANRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLR 171 (220)
Q Consensus 137 ~~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~ 171 (220)
.+.+-|++.++|+ .+..+++|+|+.+.+.+++++.
T Consensus 139 ~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~ 175 (384)
T PLN02580 139 RALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVG 175 (384)
T ss_pred cccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhC
Confidence 3456789999999 5557999999999999998886
No 300
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=23.74 E-value=1.9e+02 Score=27.02 Aligned_cols=24 Identities=38% Similarity=0.573 Sum_probs=16.9
Q ss_pred cHHHHHHHHhhCCCCCCceEeccCCCC
Q 027701 191 KVNVLKQLQKKPEHQGLRLQRSTCNPE 217 (220)
Q Consensus 191 kp~~l~~~l~~~~~~~~~~~~~~~~~~ 217 (220)
+++.+..+. ...+.+++|.+|||.
T Consensus 376 ~~~~lk~l~---~~~p~~IvYVSCNP~ 399 (432)
T COG2265 376 DREVLKQLA---KLKPKRIVYVSCNPA 399 (432)
T ss_pred CHHHHHHHH---hcCCCcEEEEeCCHH
Confidence 345554444 347899999999996
No 301
>smart00099 btg1 tob/btg1 family. The tob/btg1 is a family of proteins that inhibit cell proliferation.
Probab=23.72 E-value=3.2e+02 Score=20.49 Aligned_cols=59 Identities=14% Similarity=0.254 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHHHHHHhhccccccccCCCCCccHHHHHHhCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 110 ENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 110 ~~~e~~~~~~~~~r~~y~~~y~~~~~~~~~lypGv~elL~~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
++.+++....+.......++|..||.. .+|.-| +|++...+-.|..+.+...... .|+.
T Consensus 22 l~~~~v~~F~~~L~~~L~~~y~~HWyP-~~P~kG-------qayRCIrIn~~~Dp~l~~Aa~~-sGl~ 80 (108)
T smart00099 22 LSKRRVEIFAEKLTRLLKEKYKNHWYP-EKPYKG-------SGFRCIRINQKVDPVIEQACKE-SGLD 80 (108)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCC-------cceEEEEECCcCCHHHHHHHHH-hCCC
Confidence 555555555556666666677778873 456654 7788887777777777777774 7775
No 302
>PLN02151 trehalose-phosphatase
Probab=21.64 E-value=1.2e+02 Score=27.51 Aligned_cols=34 Identities=9% Similarity=0.121 Sum_probs=29.4
Q ss_pred CCCCccHHHHHH--hCCCcEEEEcCCchHHHHHHHH
Q 027701 138 NRLYPGVSDALK--LASSRIYIVTSNQSRFVETLLR 171 (220)
Q Consensus 138 ~~lypGv~elL~--~~g~~l~I~TnK~~~~a~~iL~ 171 (220)
+.+-|++.+.|+ .++.+++|+|+.+...+..++.
T Consensus 119 A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 119 AFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred ccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 367789999999 7778999999999999888775
No 303
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=21.58 E-value=1.1e+02 Score=21.59 Aligned_cols=23 Identities=13% Similarity=0.118 Sum_probs=16.3
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHh
Q 027701 105 MEEWSENREALIELSGKVRDEWM 127 (220)
Q Consensus 105 ~~~~g~~~e~~~~~~~~~r~~y~ 127 (220)
+++.|++.+++......|+..|.
T Consensus 23 LrR~Gfs~~~i~~l~~ayr~l~~ 45 (83)
T PF13720_consen 23 LRRRGFSKEEISALRRAYRILFR 45 (83)
T ss_dssp HHHTTS-HHHHHHHHHHHHHHHT
T ss_pred HHHcCCCHHHHHHHHHHHHHHHh
Confidence 35668888888877788888774
No 304
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=21.37 E-value=2.9e+02 Score=25.06 Aligned_cols=65 Identities=17% Similarity=0.253 Sum_probs=40.7
Q ss_pred CCCCCccHHHHHH---hCC-CcEEEEcCCchHHHHHHHHHhhCC-------------CCCCceEecCCCCCcHHHHHHHH
Q 027701 137 ANRLYPGVSDALK---LAS-SRIYIVTSNQSRFVETLLRELAGV-------------TITPDRLYGLGTGPKVNVLKQLQ 199 (220)
Q Consensus 137 ~~~lypGv~elL~---~~g-~~l~I~TnK~~~~a~~iL~~~~gl-------------~~~f~~v~G~~~~pkp~~l~~~l 199 (220)
..+++|||....+ +.| .++.-+||-|-.+-..+-+ .++- ...++.++++....|-..++.++
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~e-fi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil 272 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQE-FITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNIL 272 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHH-HHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHH
Confidence 4689999999998 445 8999999999776543332 2221 12345555544224555666666
Q ss_pred hhC
Q 027701 200 KKP 202 (220)
Q Consensus 200 ~~~ 202 (220)
.++
T Consensus 273 ~~~ 275 (373)
T COG4850 273 RRY 275 (373)
T ss_pred HhC
Confidence 654
No 305
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=21.32 E-value=2.4e+02 Score=24.14 Aligned_cols=61 Identities=16% Similarity=0.291 Sum_probs=37.8
Q ss_pred CCccHHHHHH---hCCCcEEEEcCCchHH---HHHHHHHhhCCCCCCceEecCCCCCcHHHHHHHHhhCCCCC
Q 027701 140 LYPGVSDALK---LASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQG 206 (220)
Q Consensus 140 lypGv~elL~---~~g~~l~I~TnK~~~~---a~~iL~~~~gl~~~f~~v~G~~~~pkp~~l~~~l~~~~~~~ 206 (220)
.-||..|.|+ .++.++-.+||-..+. +..-|.+ +|++-.-+.|+. |-|. ...++++-+.+|
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~r-lgf~v~eeei~t----sl~a-a~~~~~~~~lrP 90 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQR-LGFDVSEEEIFT----SLPA-ARQYLEENQLRP 90 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHH-hCCCccHHHhcC----ccHH-HHHHHHhcCCCc
Confidence 6799999999 6899999999955444 4444453 676644444443 3332 344555555544
No 306
>COG2442 Uncharacterized conserved protein [Function unknown]
Probab=21.20 E-value=2.9e+02 Score=19.36 Aligned_cols=29 Identities=21% Similarity=0.244 Sum_probs=21.0
Q ss_pred CcchHHHhhhhhhhhHHHHHhhcCCHHHHHHHHHHHHHH
Q 027701 87 GLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDE 125 (220)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~r~~ 125 (220)
|.+.++++.+|. +++.+++.++...+.+.
T Consensus 43 G~s~eeil~dyp----------~Lt~~dI~aal~ya~~~ 71 (79)
T COG2442 43 GESIEEILADYP----------DLTLEDIRAALRYAADR 71 (79)
T ss_pred CCCHHHHHHhCC----------CCCHHHHHHHHHHHHHH
Confidence 667777777666 57888888887766554
No 307
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=20.10 E-value=1.3e+02 Score=31.21 Aligned_cols=39 Identities=15% Similarity=0.326 Sum_probs=34.8
Q ss_pred CCCCccHHHHHH---hCCCcEEEEcCCchHHHHHHHHHhhCCC
Q 027701 138 NRLYPGVSDALK---LASSRIYIVTSNQSRFVETLLRELAGVT 177 (220)
Q Consensus 138 ~~lypGv~elL~---~~g~~l~I~TnK~~~~a~~iL~~~~gl~ 177 (220)
-+|=|||+++++ ++|+++.++|+-..+.|..+-.+ .|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 367899999999 89999999999999999999885 8874
Done!