Query 027702
Match_columns 220
No_of_seqs 111 out of 219
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 23:48:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1upk_A MO25 protein; transfera 100.0 2.4E-80 8.3E-85 563.1 20.4 216 1-219 1-216 (341)
2 1upk_A MO25 protein; transfera 95.2 0.19 6.4E-06 45.6 11.6 137 73-212 156-301 (341)
3 3grl_A General vesicular trans 85.7 16 0.00054 35.8 14.1 150 46-198 79-243 (651)
4 1xqr_A HSPBP1 protein; armadil 84.9 18 0.00062 31.1 13.9 131 73-208 73-208 (296)
5 4db6_A Armadillo repeat protei 83.6 8.7 0.0003 29.6 9.5 115 75-194 90-207 (210)
6 3qml_C Protein SLS1, nucleotid 82.9 2.8 9.6E-05 37.6 6.9 59 70-136 62-122 (315)
7 4db8_A Armadillo-repeat protei 80.3 7.9 0.00027 30.8 8.3 121 75-200 48-171 (252)
8 4hxt_A De novo protein OR329; 79.9 13 0.00045 29.0 9.4 117 76-197 123-242 (252)
9 1xm9_A Plakophilin 1; armadill 79.4 34 0.0012 30.6 13.1 145 40-200 298-452 (457)
10 4db6_A Armadillo repeat protei 77.0 22 0.00075 27.3 9.8 130 74-208 47-179 (210)
11 4b8j_A Importin subunit alpha- 71.2 30 0.001 30.9 10.4 117 75-197 322-444 (528)
12 4hxt_A De novo protein OR329; 66.4 43 0.0015 25.9 12.7 127 76-207 81-210 (252)
13 3dad_A FH1/FH2 domain-containi 56.6 1.1E+02 0.0038 27.4 14.7 176 13-216 115-312 (339)
14 1jdh_A Beta-catenin; beta-cate 54.7 1.1E+02 0.0037 26.7 10.7 113 80-197 16-131 (529)
15 2prs_A High-affinity zinc upta 54.4 37 0.0013 28.8 7.4 72 10-81 121-223 (284)
16 1xgw_A Epsin 4; ENTH, enthopro 54.4 11 0.00036 31.0 3.7 93 62-166 47-153 (176)
17 3gi1_A LBP, laminin-binding pr 53.3 35 0.0012 29.2 7.1 72 10-81 126-228 (286)
18 4db8_A Armadillo-repeat protei 52.6 81 0.0028 24.6 12.9 128 76-208 91-221 (252)
19 1w9c_A CRM1 protein, exportin 52.4 55 0.0019 29.1 8.3 87 127-215 114-218 (321)
20 2z6g_A B-catenin; FULL-length, 51.7 1.4E+02 0.0048 28.7 11.8 113 80-197 149-264 (780)
21 2jdq_A Importin alpha-1 subuni 49.9 78 0.0027 26.9 8.8 117 76-197 271-391 (450)
22 2z6h_A Catenin beta-1, beta-ca 49.0 1.5E+02 0.0053 27.2 11.3 115 78-197 11-128 (644)
23 1wa5_B Importin alpha subunit; 48.3 1.5E+02 0.0051 26.4 11.4 116 75-196 335-457 (530)
24 3cx3_A Lipoprotein; zinc-bindi 48.2 44 0.0015 28.4 6.8 73 10-82 124-227 (284)
25 2o1e_A YCDH; alpha-beta protei 48.0 36 0.0012 29.5 6.3 72 10-81 137-239 (312)
26 2bnx_A Diaphanous protein homo 47.4 92 0.0032 27.8 9.1 97 117-216 89-210 (386)
27 2yru_A Steroid receptor RNA ac 47.1 32 0.0011 26.2 5.1 45 40-84 35-79 (118)
28 3ujp_A Mn transporter subunit; 45.2 71 0.0024 27.7 7.8 73 10-82 135-240 (307)
29 1pq4_A Periplasmic binding pro 44.1 59 0.002 27.8 7.0 72 10-81 137-237 (291)
30 3hh8_A Metal ABC transporter s 43.6 67 0.0023 27.5 7.3 73 10-82 128-233 (294)
31 3gjx_A Exportin-1; transport, 43.0 58 0.002 33.4 7.8 77 138-216 842-927 (1073)
32 3mfq_A TROA, high-affinity zin 42.0 72 0.0025 27.1 7.2 72 10-81 108-212 (282)
33 1eyh_A Epsin; superhelix of he 41.5 54 0.0019 25.6 5.8 96 63-166 19-123 (144)
34 3ul1_B Importin subunit alpha- 41.3 1E+02 0.0035 27.8 8.5 116 75-194 352-476 (510)
35 3onk_A Epsin-3, ENT3; helix, p 41.1 53 0.0018 26.0 5.8 98 63-166 25-130 (150)
36 1toa_A Tromp-1, protein (perip 40.5 74 0.0025 27.5 7.2 72 10-81 142-246 (313)
37 2jdq_A Importin alpha-1 subuni 39.7 1.7E+02 0.0059 24.7 12.0 117 77-199 145-266 (450)
38 1xqr_A HSPBP1 protein; armadil 39.4 1.4E+02 0.0049 25.4 8.8 122 77-203 120-245 (296)
39 1qgr_A Protein (importin beta 38.6 2E+02 0.0067 26.9 10.2 121 81-207 128-257 (876)
40 4b8j_A Importin subunit alpha- 36.5 2.2E+02 0.0076 25.1 12.6 118 75-197 280-401 (528)
41 1inz_A EPS15-interacting porte 36.5 43 0.0015 26.4 4.5 92 63-164 37-139 (148)
42 1xvl_A Mn transporter, MNTC pr 36.2 96 0.0033 27.0 7.2 72 10-81 149-253 (321)
43 1ddb_A Protein (BID); apoptosi 35.9 18 0.00062 30.1 2.3 73 40-118 80-164 (195)
44 1vdy_A Hypothetical protein (R 35.1 1.4E+02 0.0049 23.2 7.4 95 65-164 27-129 (140)
45 1jdh_A Beta-catenin; beta-cate 33.8 1.5E+02 0.0052 25.7 8.2 31 79-109 141-171 (529)
46 1wa5_C Importin alpha RE-expor 32.9 2.1E+02 0.007 28.0 9.7 100 93-197 49-153 (960)
47 1u6g_C TIP120 protein, CAND1; 32.2 2.9E+02 0.01 27.5 10.8 106 82-197 49-164 (1230)
48 3ul1_B Importin subunit alpha- 31.8 2.8E+02 0.0096 24.8 10.2 117 75-196 268-387 (510)
49 3tpo_A Importin subunit alpha- 31.4 2.9E+02 0.0098 24.8 13.4 117 75-196 287-406 (529)
50 4hat_C Exportin-1; heat repeat 31.2 1.4E+02 0.0047 30.3 8.3 78 138-217 816-904 (1023)
51 1naf_A ADP-ribosylation factor 30.8 1.1E+02 0.0038 24.4 6.1 36 42-77 61-100 (158)
52 1wa5_B Importin alpha subunit; 29.8 2.9E+02 0.01 24.4 11.7 122 78-204 212-336 (530)
53 1oxz_A ADP-ribosylation factor 29.7 2.2E+02 0.0074 23.2 7.9 37 42-78 77-117 (186)
54 2gd5_A Charged multivesicular 29.3 71 0.0024 25.5 4.8 61 12-80 6-66 (179)
55 2jqq_A Conserved oligomeric go 27.8 79 0.0027 26.4 4.8 63 14-79 74-138 (204)
56 2bid_A Protein (BID); programm 27.3 96 0.0033 25.7 5.2 42 40-85 82-123 (197)
57 3now_A UNC-45 protein, SD10334 25.5 5E+02 0.017 25.7 11.2 128 73-206 615-746 (810)
58 1bh9_A TAFII18; histone fold, 24.3 95 0.0033 19.6 3.7 27 51-78 4-31 (45)
59 3frt_A Charged multivesicular 24.1 2.4E+02 0.0081 23.5 7.3 65 8-80 2-66 (218)
60 4fdd_A Transportin-1; heat rep 20.6 2.2E+02 0.0077 27.0 7.3 153 54-208 93-256 (852)
No 1
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=100.00 E-value=2.4e-80 Score=563.14 Aligned_cols=216 Identities=40% Similarity=0.680 Sum_probs=191.6
Q ss_pred CCccCCCCCCCCChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHHhh
Q 027702 1 MSFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKE 80 (220)
Q Consensus 1 M~flf~~k~~~ktP~elVr~~~e~l~~L~~~~~~~~~~~~k~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~ 80 (220)
|++-| +++||||+|+||+++|+|.+|+.++. .+++.+|++|||+|+|++||.||||++|+||+||+|+||++|+|++
T Consensus 1 ~~m~F--~~~~ktP~elVr~l~d~l~~l~~~~~-~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~ 77 (341)
T 1upk_A 1 MPFPF--GKSHKSPADIVKNLKESMAVLEKQDI-SDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNS 77 (341)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHC----CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHH
T ss_pred CCCCC--CCCCCCHHHHHHHHHHHHHHHhcccc-ccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHh
Confidence 33337 45899999999999999999986431 2234478999999999999999999999999999999999999999
Q ss_pred cHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhccCcchhhhhhHHHHHHhhhHHHH
Q 027702 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLA 160 (220)
Q Consensus 81 dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~~~diAl~~G~mLREcik~e~la 160 (220)
|+|++||.+||+||||+|||+++||++++|+++|+++|+|+||++|||||++|++||+++|+|++||+|||||||||++|
T Consensus 78 dll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G~mLRecir~e~la 157 (341)
T 1upk_A 78 GLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLA 157 (341)
T ss_dssp SHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHH
T ss_pred CHHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHHHHHHhcHHHHHHhhhc
Q 027702 161 RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEVYTHLIS 219 (220)
Q Consensus 161 ~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lvaefL~~Nyd~Ff~~y~~ 219 (220)
++||+|+.||+||+||+.|+||||||||+|||||||+||++||+||++|||+||++|+.
T Consensus 158 ~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~ 216 (341)
T 1upk_A 158 KIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEK 216 (341)
T ss_dssp HHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999974
No 2
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=95.24 E-value=0.19 Score=45.65 Aligned_cols=137 Identities=15% Similarity=0.239 Sum_probs=101.2
Q ss_pred HHHHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhccCcchhh-------h
Q 027702 73 LATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVAL-------H 145 (220)
Q Consensus 73 L~~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~~~diAl-------~ 145 (220)
||.-+..++.+..+...+..=.||---|+...|..+|-+. +..+.+||..|-+..+....+-=..+-.. .
T Consensus 156 la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~H---k~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKL 232 (341)
T 1upk_A 156 LAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRH---KLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKL 232 (341)
T ss_dssp HHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSS---HHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcc---HHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHH
Confidence 3444445556667778888889999999999999999864 34678999999877666554432222222 3
Q ss_pred hhHHHHHHhhhHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHh-cChh-HHHHHHHhcHHH
Q 027702 146 CGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLT-KHLT-VVSEYLTAHYDE 212 (220)
Q Consensus 146 ~G~mLREcik~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLt-rHk~-lvaefL~~Nyd~ 212 (220)
.|.+|.+-..+..+.+||-..+.+.-+...+..++=-|..+||..||--.. .||+ -|.+.|..|=++
T Consensus 233 LgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K~~~I~~IL~~Nr~k 301 (341)
T 1upk_A 233 LGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAK 301 (341)
T ss_dssp HHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHH
T ss_pred HHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCCChHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999994332 2222 333555554443
No 3
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=85.72 E-value=16 Score=35.78 Aligned_cols=150 Identities=21% Similarity=0.198 Sum_probs=95.3
Q ss_pred HHHHHHHhhhhhcCCCCCC-------CChHHHHHHHHHHHh-hcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCcc
Q 027702 46 IEKNFVTMRCMLSGDGEVE-------PNADQVLQLATEVCK-EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTY 117 (220)
Q Consensus 46 isK~L~~mK~iL~G~~e~e-------p~~e~~~qL~~ei~~-~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~ 117 (220)
+.-.|.-+-.++.++++.+ ...+...+++.++.+ .+-+..|+..|..=+|..|-.+.++...+++.+...
T Consensus 79 v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~-- 156 (651)
T 3grl_A 79 IGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQ-- 156 (651)
T ss_dssp HHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHH--
T ss_pred HHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHH--
Confidence 3333445555666655432 112344566666654 468899999999999999999999999999855331
Q ss_pred chhHHhhccHHHHHHHHHhccCc-chhhhhhH-HHHHHhh-hHHHHHHHcCchhHHHHhhhhcCCCh----hhhhhhHHH
Q 027702 118 CCVQFIENHFELLDFLVVCYDNK-EVALHCGI-MLRECIK-FPSLARYILESASFELFFKFVELPTF----DVASDAFST 190 (220)
Q Consensus 118 p~v~Yl~~~peil~~L~~gY~~~-diAl~~G~-mLREcik-~e~la~~iL~~~~f~~fF~yv~~~~F----eiasDAf~t 190 (220)
+=++|...|.-+..|+.--+++ |+-=+-+. +|-+-.+ +..+-+++=.-.-|.++|+-++...- .|..|++..
T Consensus 157 -~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~l 235 (651)
T 3grl_A 157 -VQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLIL 235 (651)
T ss_dssp -HHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHH
T ss_pred -HHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHH
Confidence 3478888899999998877654 32222111 1222222 33444444444568888888877665 788888888
Q ss_pred HHHHHhcC
Q 027702 191 FKDLLTKH 198 (220)
Q Consensus 191 fkelLtrH 198 (220)
...||.-+
T Consensus 236 l~nLLr~N 243 (651)
T 3grl_A 236 LQNLLKNN 243 (651)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhcC
Confidence 88887654
No 4
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=84.87 E-value=18 Score=31.13 Aligned_cols=131 Identities=12% Similarity=0.050 Sum_probs=80.0
Q ss_pred HHHHHHhhcHHHHHHh-cCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhcc---HHHHHHHHHhccCcchhhhhhH
Q 027702 73 LATEVCKEDVLILLVH-KLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH---FELLDFLVVCYDNKEVALHCGI 148 (220)
Q Consensus 73 L~~ei~~~dll~~Li~-~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~---peil~~L~~gY~~~diAl~~G~ 148 (220)
-++.+.+.+-+..|+. .|..=+-+.|..++.+.+++...... .-+++... |-++..|-... ++++.-.+-.
T Consensus 73 na~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~----~~~~vv~~g~l~~Ll~LL~~~~-~~~v~~~A~~ 147 (296)
T 1xqr_A 73 NAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAA----IQEQVLGLGALRKLLRLLDRDA-CDTVRVKALF 147 (296)
T ss_dssp HHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHH----HHHHHHHTTHHHHHHHHHHHCS-CHHHHHHHHH
T ss_pred hHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHH----HHHHHHHCCCHHHHHHHHccCC-CHHHHHHHHH
Confidence 4556677788888999 88888888999999999999753211 22333332 33333332221 2333333333
Q ss_pred HHHHHhh-hHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHHHHHHh
Q 027702 149 MLRECIK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTA 208 (220)
Q Consensus 149 mLREcik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lvaefL~~ 208 (220)
-|--.++ +......+.....+-.+...++.+++++-.+|...+..+...+......+.+.
T Consensus 148 ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~ 208 (296)
T 1xqr_A 148 AISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSM 208 (296)
T ss_dssp HHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHT
T ss_pred HHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHc
Confidence 3333344 33434445545566677777888999999999999888876555444444443
No 5
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=83.58 E-value=8.7 Score=29.64 Aligned_cols=115 Identities=14% Similarity=0.085 Sum_probs=81.1
Q ss_pred HHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhcc--CcchhhhhhHHHHH
Q 027702 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLRE 152 (220)
Q Consensus 75 ~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~--~~diAl~~G~mLRE 152 (220)
+.+.+.+.+..|+..|..=+-+.|+.++....++.....+ ..+.+.. ..++..|+.--. ++++-..+-..|..
T Consensus 90 ~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~----~~~~~~~-~~~i~~L~~ll~~~~~~v~~~a~~aL~~ 164 (210)
T 4db6_A 90 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE----QIQAVID-AGALPALVQLLSSPNEQILQEALWALSN 164 (210)
T ss_dssp HHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHH----HHHHHHH-cCcHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 3455667889999999988999999999999999763221 2233332 334444444333 55666777777777
Q ss_pred Hhhh-HHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHH
Q 027702 153 CIKF-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDL 194 (220)
Q Consensus 153 cik~-e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkel 194 (220)
+..+ +.....+.....+..+.+.++.++-+|...|...+..+
T Consensus 165 l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l 207 (210)
T 4db6_A 165 IASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKL 207 (210)
T ss_dssp HHTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred HHcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 7776 77777777777788888888888888888887776654
No 6
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=82.88 E-value=2.8 Score=37.58 Aligned_cols=59 Identities=17% Similarity=0.085 Sum_probs=47.0
Q ss_pred HHHHHH-HHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhc-cHHHHHHHHHh
Q 027702 70 VLQLAT-EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-HFELLDFLVVC 136 (220)
Q Consensus 70 ~~qL~~-ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~-~peil~~L~~g 136 (220)
-.+|+. + -++|..|+ +...+|.+-|.-++.|.+.+||. .+|++++|.+ +|..+..+|..
T Consensus 62 G~KI~~~e---f~lL~nL~-~~~~~~~~~rE~aarII~ssLRN----NP~Al~~V~~~~p~fv~~lf~~ 122 (315)
T 3qml_C 62 GYKIITHE---FALLANLS-LNENLPLTLRELSTRVITSCLRN----NPPVVEFINESFPNFKSKIMAA 122 (315)
T ss_dssp HHHHHHHH---HHHHHHHH-HCTTSCHHHHHHHHHHHHHHHTT----CHHHHHHHHHHCTTHHHHHHHH
T ss_pred hhHHHhCc---HHHHHHHH-hhccCChhHHHHHHHHHHHHHcc----CHHHHHHHHHhChhHHHHHHHH
Confidence 344554 4 36788888 55569999999999999999994 4679999998 59999999854
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=80.27 E-value=7.9 Score=30.76 Aligned_cols=121 Identities=12% Similarity=0.104 Sum_probs=83.7
Q ss_pred HHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhc--cCcchhhhhhHHHHH
Q 027702 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRE 152 (220)
Q Consensus 75 ~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~diAl~~G~mLRE 152 (220)
..+...+.+..|+..|..=+-+.|..++.+..++...... ..+.+.. ..++..|+.-- +++++--.+-..|..
T Consensus 48 ~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~----~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~ 122 (252)
T 4db8_A 48 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE----QIQAVID-AGALPALVQLLSSPNEQILQEALWALSN 122 (252)
T ss_dssp HHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHH----HHHHHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 4566778999999999888888888888888888753322 1233322 23444443333 345666667777777
Q ss_pred HhhhHHHH-HHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChh
Q 027702 153 CIKFPSLA-RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLT 200 (220)
Q Consensus 153 cik~e~la-~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~ 200 (220)
....+... ..+.....+..+.+.++.++-++...|..++..+......
T Consensus 123 l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~ 171 (252)
T 4db8_A 123 IASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE 171 (252)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHH
T ss_pred hhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChH
Confidence 77666655 6777777788888888889999999999888877764433
No 8
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=79.87 E-value=13 Score=28.98 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=84.1
Q ss_pred HHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhcc--CcchhhhhhHHHHHH
Q 027702 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLREC 153 (220)
Q Consensus 76 ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~--~~diAl~~G~mLREc 153 (220)
.+.+.+.+..|+..|..=+-+.|+.++....++.+...+ ..+.+.. ..++..|+.--. ++++-..+-..|...
T Consensus 123 ~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~----~~~~~~~-~~~i~~L~~ll~~~~~~v~~~a~~~L~~l 197 (252)
T 4hxt_A 123 AIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE----AIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANI 197 (252)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHH----HHHHHHH-CcCHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 344557899999999988899999999999999764321 1233333 445555544433 446666666667666
Q ss_pred hh-hHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhc
Q 027702 154 IK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 154 ik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtr 197 (220)
.. .+...+.+.....+..+.+.++.++-++...|..++..+...
T Consensus 198 ~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~ 242 (252)
T 4hxt_A 198 ASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRALENIKSG 242 (252)
T ss_dssp TTSBHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcC
Confidence 65 677777788888888999999999999999999888877654
No 9
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=79.42 E-value=34 Score=30.64 Aligned_cols=145 Identities=12% Similarity=0.114 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHH-hhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccc
Q 027702 40 EKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVC-KEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYC 118 (220)
Q Consensus 40 ~k~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~-~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p 118 (220)
+...|...-.|..+- .|+++ ...++++.+. +.+.+..|+..|..=+++.||.++...+++-+..
T Consensus 298 ~~~~e~a~~aL~nl~---~~~~~------~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~~------ 362 (457)
T 1xm9_A 298 DATLEACAGALQNLT---ASKGL------MSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP------ 362 (457)
T ss_dssp HHHHHHHHHHHHHHT---TCSSS------HHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSG------
T ss_pred HHHHHHHHHHHHHhc---cCcCc------chHHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhcCH------
Confidence 345566666666543 23321 2223445555 4688999999999999999999999999997632
Q ss_pred hhHHhhcc---HHHHHHHHHhcc----CcchhhhhhHHHHHHhh-hHHHHHHHcCchhHHHHhhhhcCC-ChhhhhhhHH
Q 027702 119 CVQFIENH---FELLDFLVVCYD----NKEVALHCGIMLRECIK-FPSLARYILESASFELFFKFVELP-TFDVASDAFS 189 (220)
Q Consensus 119 ~v~Yl~~~---peil~~L~~gY~----~~diAl~~G~mLREcik-~e~la~~iL~~~~f~~fF~yv~~~-~FeiasDAf~ 189 (220)
...++... |.++..|-.+-. .+++...+-..|..+++ ....++.+.+..-+.++.+....+ +=+|.-.|..
T Consensus 363 ~~~~~i~~~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~~~~i~~~g~l~~L~~L~~~~~~~~i~~~A~~ 442 (457)
T 1xm9_A 363 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 442 (457)
T ss_dssp GGHHHHHHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHHcCCCcHHHHHHHHH
Confidence 23333332 333333332211 12454444444555554 456788888888888888888777 7777777777
Q ss_pred HHHHHHhcChh
Q 027702 190 TFKDLLTKHLT 200 (220)
Q Consensus 190 tfkelLtrHk~ 200 (220)
++..+. .|++
T Consensus 443 ~L~~~~-~~~~ 452 (457)
T 1xm9_A 443 LLSDMW-SSKE 452 (457)
T ss_dssp HHHTTS-SSTT
T ss_pred HHHHHH-cchh
Confidence 765444 4443
No 10
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=77.02 E-value=22 Score=27.28 Aligned_cols=130 Identities=12% Similarity=0.090 Sum_probs=87.2
Q ss_pred HHHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhcc--CcchhhhhhHHHH
Q 027702 74 ATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLR 151 (220)
Q Consensus 74 ~~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~--~~diAl~~G~mLR 151 (220)
...+.+.+.+..|+..|..=+-+.|..++....++...... ..+.+.. ..++..|+.--+ ++++--.+-..|.
T Consensus 47 ~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~----~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~ 121 (210)
T 4db6_A 47 IQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE----QIQAVID-AGALPALVQLLSSPNEQILQEALWALS 121 (210)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTCHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcH----HHHHHHH-CCCHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 35566778899999999887888999999999988753321 1222222 223333333322 4455556666666
Q ss_pred HHhh-hHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHHHHHHh
Q 027702 152 ECIK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTA 208 (220)
Q Consensus 152 Ecik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lvaefL~~ 208 (220)
.... .+...+.++....+..+.+.++.++-++...|...+..+..........+...
T Consensus 122 ~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~ 179 (210)
T 4db6_A 122 NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEA 179 (210)
T ss_dssp HHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHC
Confidence 6654 45555667777788889999999999999999999998887655554444443
No 11
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=71.22 E-value=30 Score=30.93 Aligned_cols=117 Identities=10% Similarity=0.127 Sum_probs=80.2
Q ss_pred HHHHhhcHHHHHHhcCCCC-CchhhhcHHHHHHHhhhcccCCccchhHHhhcc---HHHHHHHHHhccCcchhhhhhHHH
Q 027702 75 TEVCKEDVLILLVHKLPIL-GWEARKDLVHCWSILLKQKVDSTYCCVQFIENH---FELLDFLVVCYDNKEVALHCGIML 150 (220)
Q Consensus 75 ~ei~~~dll~~Li~~L~~L-~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~---peil~~L~~gY~~~diAl~~G~mL 150 (220)
+.+.+.+.+..|+..|..= +-+.|+.++.+.+++... ....+.++... |-++..|-.+ ++++-..+-..|
T Consensus 322 ~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~----~~~~~~~~~~~~~i~~L~~lL~~~--~~~v~~~a~~aL 395 (528)
T 4b8j_A 322 QCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAG----NKDQIQAVINAGIIGPLVNLLQTA--EFDIKKEAAWAI 395 (528)
T ss_dssp HHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTS----CHHHHHHHHHTTCHHHHHHHHHHS--CHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCC----CHHHHHHHHHCCCHHHHHHHHhcC--CHHHHHHHHHHH
Confidence 3456677888888888766 788999999999999862 12234455442 5555555443 556666666666
Q ss_pred HHHhhh--HHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhc
Q 027702 151 RECIKF--PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 151 REcik~--e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtr 197 (220)
..+..+ ....+++.....+..+.+.+..++-+|-.-|...+..++..
T Consensus 396 ~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~al~~L~~l~~~ 444 (528)
T 4b8j_A 396 SNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKV 444 (528)
T ss_dssp HHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 666655 56667777777788888888888888777777777766653
No 12
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=66.38 E-value=43 Score=25.90 Aligned_cols=127 Identities=13% Similarity=0.167 Sum_probs=88.7
Q ss_pred HHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhcc--CcchhhhhhHHHHHH
Q 027702 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLREC 153 (220)
Q Consensus 76 ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~--~~diAl~~G~mLREc 153 (220)
.+.+.+.+..|+..|..=+-+.|..++.+..++...... ..+.+.. ..++..|+.--. ++++...+...|...
T Consensus 81 ~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~----~~~~~~~-~~~i~~L~~~l~~~~~~~~~~a~~~L~~l 155 (252)
T 4hxt_A 81 AIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE----AIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANI 155 (252)
T ss_dssp HHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHH----HHHHHHH-CCCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 344557888999999887888888988888888753322 1222222 344555544433 456777777777777
Q ss_pred hh-hHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHHHHHH
Q 027702 154 IK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLT 207 (220)
Q Consensus 154 ik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lvaefL~ 207 (220)
.. .+...+.+.....+..+.+.++.++-++...|..++..+...+......+.+
T Consensus 156 ~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~ 210 (252)
T 4hxt_A 156 ASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVD 210 (252)
T ss_dssp TTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 76 4666677777788888999999999999999999999887755555444443
No 13
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=56.62 E-value=1.1e+02 Score=27.41 Aligned_cols=176 Identities=10% Similarity=0.100 Sum_probs=103.5
Q ss_pred ChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHHhhcHHHHHHhcCCC
Q 027702 13 TPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPI 92 (220)
Q Consensus 13 tP~elVr~~~e~l~~L~~~~~~~~~~~~k~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~dll~~Li~~L~~ 92 (220)
+|.--|+.+.|.|. ++++ +|.-+.|..+|.++..|. .+|+|+.+.|=+..|+.....
T Consensus 115 sps~ra~~iiekL~---~~~~----------~~lr~aLfsLk~~~q~D~----------~Fa~EFI~~~GL~~Li~vi~~ 171 (339)
T 3dad_A 115 QLSVRVNAILEKLY---SSSG----------PELRRSLFSLKQIFQEDK----------DLVPEFVHSEGLSCLIRVGAA 171 (339)
T ss_dssp CHHHHHHHHHHHHH---HCCH----------HHHHHHHHHHHHHHHTCT----------THHHHHHHTTHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHh---cCCc----------HHHHHHHHHHHHHhhcch----------HHHHHHHHhccHHHHHHHHHh
Confidence 46666666665553 3333 477788889999888544 399999999988888888877
Q ss_pred CCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhccCc--chhhhhhHHHHHHhhh-HHHHHHHcCchh-
Q 027702 93 LGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNK--EVALHCGIMLRECIKF-PSLARYILESAS- 168 (220)
Q Consensus 93 L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~~~--diAl~~G~mLREcik~-e~la~~iL~~~~- 168 (220)
-+-+...-+-.-|..++=+-.| .+=+..||+.+..+.+--... .+.-.+..+|.-++-+ |..+..+...-.
T Consensus 172 ~~gN~q~Y~L~AL~~LM~~v~G-----m~gvvs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~ 246 (339)
T 3dad_A 172 ADHNYQSYILRALGQLMLFVDG-----MLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNS 246 (339)
T ss_dssp SCHHHHHHHHHHHHHHTTSHHH-----HHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHhcccc-----ccchhCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHH
Confidence 7666666655556655532111 122455899998886644432 2222344444444333 223332222111
Q ss_pred ---------HHHHhhhhc---CCChhhhhhhHHHHHHHHhc------ChhHHHHHHHhcHHHHHHh
Q 027702 169 ---------FELFFKFVE---LPTFDVASDAFSTFKDLLTK------HLTVVSEYLTAHYDEVYTH 216 (220)
Q Consensus 169 ---------f~~fF~yv~---~~~FeiasDAf~tfkelLtr------Hk~lvaefL~~Nyd~Ff~~ 216 (220)
+....+-++ .++=|+.--|++-+..+|.. -..++.++=..|.+....+
T Consensus 247 v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~amtLIN~lL~~apd~d~~~di~d~Le~~gi~~~i~r 312 (339)
T 3dad_A 247 VASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQR 312 (339)
T ss_dssp HHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hhhccCCCcHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHccHHHHHHH
Confidence 445566665 67777777777777776642 1244444445566554443
No 14
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=54.67 E-value=1.1e+02 Score=26.74 Aligned_cols=113 Identities=16% Similarity=0.065 Sum_probs=78.4
Q ss_pred hcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhc---cCcchhhhhhHHHHHHhhh
Q 027702 80 EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECIKF 156 (220)
Q Consensus 80 ~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY---~~~diAl~~G~mLREcik~ 156 (220)
.+.+..|+..|..=+-+.|..++....++-+.. +...-+...+.++..|+..- +++++-..+-..|+.+.+.
T Consensus 16 ~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~-----~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~ 90 (529)
T 1jdh_A 16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH 90 (529)
T ss_dssp -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSH-----HHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS
T ss_pred HhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCC-----ccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcC
Confidence 455666666666556777888888887776532 12233444555555554432 4677888888889988887
Q ss_pred HHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhc
Q 027702 157 PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 157 e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtr 197 (220)
+.....+......-.+.+.++.++-++...|..++..+...
T Consensus 91 ~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~ 131 (529)
T 1jdh_A 91 REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLH 131 (529)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcC
Confidence 77777777777788888888888888888888888877653
No 15
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=54.44 E-value=37 Score=28.81 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=48.2
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhcC-----------------------------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLSG----------------------------- 59 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~G----------------------------- 59 (220)
.|+.-..+|+.+.+.|.+++..... =.++.++..+++.+.-..++..+-+
T Consensus 121 dp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~ 200 (284)
T 2prs_A 121 SPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFT 200 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCEEEEESCCHHHHHHHTCCCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEECccHHHHHHHCCCeEeEeec
Confidence 5666778899999999999864421 1234455555555555555444321
Q ss_pred -CCCCCCChHHHHHHHHHHHhhc
Q 027702 60 -DGEVEPNADQVLQLATEVCKED 81 (220)
Q Consensus 60 -~~e~ep~~e~~~qL~~ei~~~d 81 (220)
.++.||++..+++|...+-+.+
T Consensus 201 ~~~~~eps~~~l~~l~~~ik~~~ 223 (284)
T 2prs_A 201 VNPEIQPGAQRLHEIRTQLVEQK 223 (284)
T ss_dssp SSTTSCCCHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCHHHHHHHHHHHHHcC
Confidence 2467899999999998886664
No 16
>1xgw_A Epsin 4; ENTH, enthoprotin, clathrin-associated, endocytosis; 1.90A {Homo sapiens} PDB: 2qy7_A 2v8s_E
Probab=54.41 E-value=11 Score=30.97 Aligned_cols=93 Identities=17% Similarity=0.194 Sum_probs=53.3
Q ss_pred CCCCChHHHHHHHHHHHhhcHHHHHHhcCC-CCCchhhhcHHHHHHHhhhcccCCccchhHHhhc------------cHH
Q 027702 62 EVEPNADQVLQLATEVCKEDVLILLVHKLP-ILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN------------HFE 128 (220)
Q Consensus 62 e~ep~~e~~~qL~~ei~~~dll~~Li~~L~-~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~------------~pe 128 (220)
.-.|++.+.++||+..|+.+-+..+..-|. .|-=...|.--+||.+|. .++||.. |-.
T Consensus 47 ~wGPs~~~m~eIa~~T~~~~~~~~Im~~L~kRl~~~~~k~WR~vyKaL~---------LLeYLl~nGse~vv~~~r~~i~ 117 (176)
T 1xgw_A 47 PWGPSGQLMGEIAKATFMYEQFPELMNMLWSRMLKDNKKNWRRVYKSLL---------LLAYLIRNGSERVVTSAREHIY 117 (176)
T ss_dssp SSCCCHHHHHHHHHHTTCTTTHHHHHHHHHHHHHSSCTTCHHHHHHHHH---------HHHHHHHHSCHHHHHHHHHTHH
T ss_pred CCCCCHHHHHHHHHHhcChhhHHHHHHHHHHHHhccCCchhHHHHHHHH---------HHHHHHHhCCHHHHHHHHHhHH
Confidence 346889999999999988776655444442 211124566666666654 4555555 333
Q ss_pred HHHHHHHhccCc-chhhhhhHHHHHHhhhHHHHHHHcCc
Q 027702 129 LLDFLVVCYDNK-EVALHCGIMLRECIKFPSLARYILES 166 (220)
Q Consensus 129 il~~L~~gY~~~-diAl~~G~mLREcik~e~la~~iL~~ 166 (220)
+|..| .-|... +-.--.|.-+|+-. +.++..|-.+
T Consensus 118 ~I~~L-~~F~y~D~~G~D~G~~VR~kA--k~i~~LL~D~ 153 (176)
T 1xgw_A 118 DLRSL-ENYHFVDEHGKDQGINIRQKV--KELVEFAQDD 153 (176)
T ss_dssp HHHGG-GGCCCBCTTSCBCHHHHHHHH--HHHHHHHTCH
T ss_pred HHHhh-ccCeeECCCCCChHHHHHHHH--HHHHHHHCCH
Confidence 44444 334332 12345788888765 5666644443
No 17
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=53.27 E-value=35 Score=29.15 Aligned_cols=72 Identities=19% Similarity=0.066 Sum_probs=48.0
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhcC-----------------------------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLSG----------------------------- 59 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~G----------------------------- 59 (220)
.|+.-..+|+.+.+.|.+++..... =.++.++..+++.+.-..++..+-.
T Consensus 126 dp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~ 205 (286)
T 3gi1_A 126 DPVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLGISG 205 (286)
T ss_dssp SHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEESCCHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHCCCeEeeccc
Confidence 5666778999999999999864421 1234566666666666666655432
Q ss_pred -CCCCCCChHHHHHHHHHHHhhc
Q 027702 60 -DGEVEPNADQVLQLATEVCKED 81 (220)
Q Consensus 60 -~~e~ep~~e~~~qL~~ei~~~d 81 (220)
.++.||++..+++|...+-+.+
T Consensus 206 ~~~~~eps~~~l~~l~~~ik~~~ 228 (286)
T 3gi1_A 206 ISPEQEPSPRQLKEIQDFVKEYN 228 (286)
T ss_dssp SCC---CCHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCHHHHHHHHHHHHHcC
Confidence 2367899999999998887665
No 18
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=52.64 E-value=81 Score=24.62 Aligned_cols=128 Identities=12% Similarity=0.078 Sum_probs=87.6
Q ss_pred HHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhcc--CcchhhhhhHHHHHH
Q 027702 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLREC 153 (220)
Q Consensus 76 ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~--~~diAl~~G~mLREc 153 (220)
.+.+.+.+..|+..|..=+-+.|..++.+..++..... ...+.+.. ..++..|+.--. ++++...+-..|...
T Consensus 91 ~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~----~~~~~~~~-~~~i~~L~~lL~~~~~~v~~~a~~~L~~l 165 (252)
T 4db8_A 91 AVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN----EQIQAVID-AGALPALVQLLSSPNEQILQEALWALSNI 165 (252)
T ss_dssp HHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH----HHHHHHHH-TTHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCc----hHHHHHHH-CCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 34456688889998888788889999999998864221 11133332 344555544433 445666666666666
Q ss_pred hh-hHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHHHHHHh
Q 027702 154 IK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTA 208 (220)
Q Consensus 154 ik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lvaefL~~ 208 (220)
.. .+.....+.....+..+.+.+..++-++...|..++..+...+......+++.
T Consensus 166 ~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~ 221 (252)
T 4db8_A 166 ASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEA 221 (252)
T ss_dssp TTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred HcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHC
Confidence 65 35556667777788889999999999999999999999887666555555443
No 19
>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19
Probab=52.44 E-value=55 Score=29.13 Aligned_cols=87 Identities=13% Similarity=0.254 Sum_probs=65.6
Q ss_pred HHHHHHHHHh---------ccCcchhhhhhHHHHHHhhh--HHHHHHHcCchhHHHHhhh----hcCCChhhhhhhHHHH
Q 027702 127 FELLDFLVVC---------YDNKEVALHCGIMLRECIKF--PSLARYILESASFELFFKF----VELPTFDVASDAFSTF 191 (220)
Q Consensus 127 peil~~L~~g---------Y~~~diAl~~G~mLREcik~--e~la~~iL~~~~f~~fF~y----v~~~~FeiasDAf~tf 191 (220)
|.|++.+..+ .+.||.-.+-=.+||.+..| +.+.. |.++.|..+.+- ++.+.-+||--++.+.
T Consensus 114 p~Il~~VFe~TL~MI~~df~eyPehR~~Ff~LL~ai~~~cF~al~~--lp~~~fklvidsiiWa~kH~~r~V~e~gL~il 191 (321)
T 1w9c_A 114 PQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLA--IPPTQFKLVLDSIIWAFKHTMRNVADTGLQIL 191 (321)
T ss_dssp HHHHHHHHHHHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHH--SCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHc--CCHHHHHHHHHHHHHHcCCCCchHHHHHHHHH
Confidence 7888776544 57899999999999999887 54444 677788888874 6899999999999999
Q ss_pred HHHHhc---ChhHHHHHHHhcHHHHHH
Q 027702 192 KDLLTK---HLTVVSEYLTAHYDEVYT 215 (220)
Q Consensus 192 kelLtr---Hk~lvaefL~~Nyd~Ff~ 215 (220)
.++|.+ +...+.+|..+.|-....
T Consensus 192 ~~ll~n~~~~~~~~~~Fy~~fy~~il~ 218 (321)
T 1w9c_A 192 FTLLQNVAQEEAAAQSFYQTYFCDILQ 218 (321)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 999974 344555666665544443
No 20
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=51.68 E-value=1.4e+02 Score=28.75 Aligned_cols=113 Identities=15% Similarity=0.067 Sum_probs=81.7
Q ss_pred hcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhc---cCcchhhhhhHHHHHHhhh
Q 027702 80 EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECIKF 156 (220)
Q Consensus 80 ~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY---~~~diAl~~G~mLREcik~ 156 (220)
.+.+..|+..|..=+-+.|..++....++-... +...-+...|+++..|+..- +++++-..+-..|+.+.+.
T Consensus 149 ~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~-----~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~ 223 (780)
T 2z6g_A 149 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHH 223 (780)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSH-----HHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS
T ss_pred hCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCC-----hhHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC
Confidence 556777777766556778888888888776532 12234445677888776654 3678888888899988887
Q ss_pred HHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhc
Q 027702 157 PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 157 e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtr 197 (220)
..-...+.....+..+.+.++.++=++-..|..++..|-..
T Consensus 224 ~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~ 264 (780)
T 2z6g_A 224 REGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLH 264 (780)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCC
Confidence 66666666667788888888888888888888888877643
No 21
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=49.89 E-value=78 Score=26.93 Aligned_cols=117 Identities=10% Similarity=0.114 Sum_probs=75.0
Q ss_pred HHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhc--cCcchhhhhhHHHHHH
Q 027702 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLREC 153 (220)
Q Consensus 76 ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~diAl~~G~mLREc 153 (220)
.+...+.+..|+..|..=+.+.|+.+....+++.+.. ....+.+.. ..++..|+... +++++-..+-..|..+
T Consensus 271 ~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~----~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l 345 (450)
T 2jdq_A 271 VILNCSALQSLLHLLSSPKESIKKEACWTISNITAGN----RAQIQTVID-ANIFPALISILQTAEFRTRKEAAWAITNA 345 (450)
T ss_dssp HHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSC----HHHHHHHHH-TTHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC----HHHHHHHHH-CCCHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3455678888998888877889999999999987522 112222322 13333333222 2455555555555555
Q ss_pred hhh--HHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhc
Q 027702 154 IKF--PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 154 ik~--e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtr 197 (220)
..+ +...+.++....+..+.+.++.++.+|-..|...+..++..
T Consensus 346 ~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~ 391 (450)
T 2jdq_A 346 TSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRL 391 (450)
T ss_dssp HHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 543 34455566666788888888888899888888777776653
No 22
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=49.00 E-value=1.5e+02 Score=27.25 Aligned_cols=115 Identities=16% Similarity=0.058 Sum_probs=81.1
Q ss_pred HhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhc---cCcchhhhhhHHHHHHh
Q 027702 78 CKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECI 154 (220)
Q Consensus 78 ~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY---~~~diAl~~G~mLREci 154 (220)
+..+.+..|+..|..=+-+.|..++....++-+.. +...-+..++.++..|+..- +++++-..+-..|+.+.
T Consensus 11 ~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~-----~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls 85 (644)
T 2z6h_A 11 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLS 85 (644)
T ss_dssp -CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTST-----THHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred hhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCC-----hhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 34455666666666556677888888888776533 12334445566666665553 35677777888888888
Q ss_pred hhHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhc
Q 027702 155 KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 155 k~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtr 197 (220)
++......+......-.+.+.++.++-++...|..++..+...
T Consensus 86 ~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~ 128 (644)
T 2z6h_A 86 HHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLH 128 (644)
T ss_dssp TSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHH
T ss_pred cChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhC
Confidence 8877777777777888888888888888888888888887654
No 23
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=48.35 E-value=1.5e+02 Score=26.39 Aligned_cols=116 Identities=13% Similarity=0.144 Sum_probs=74.9
Q ss_pred HHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhc-c--HHHHHHHHHhccCcchhhhhhHHHH
Q 027702 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-H--FELLDFLVVCYDNKEVALHCGIMLR 151 (220)
Q Consensus 75 ~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~-~--peil~~L~~gY~~~diAl~~G~mLR 151 (220)
+.+...+.+..|+..|..=+.+.|+.++...+++.+... ..+.++.. . |.++..|-. .++++--.+-..|.
T Consensus 335 ~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~----~~~~~~~~~~~l~~L~~lL~~--~~~~v~~~a~~aL~ 408 (530)
T 1wa5_B 335 QVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNT----EQIQAVIDANLIPPLVKLLEV--AEYKTKKEACWAIS 408 (530)
T ss_dssp HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH----HHHHHHHHTTCHHHHHHHHHH--SCHHHHHHHHHHHH
T ss_pred HHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCH----HHHHHHHHCCCHHHHHHHHhc--CCHHHHHHHHHHHH
Confidence 445667889999999988889999999999999876321 22334432 1 444444432 34455444545555
Q ss_pred HHhhh--H--HHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHh
Q 027702 152 ECIKF--P--SLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLT 196 (220)
Q Consensus 152 Ecik~--e--~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLt 196 (220)
.++.. . ...+++.....+..+.+.+..++-+|-.-|...+..++.
T Consensus 409 ~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~~al~aL~~l~~ 457 (530)
T 1wa5_B 409 NASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILK 457 (530)
T ss_dssp HHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 44443 1 345566666777788888888888887777777776665
No 24
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=48.22 E-value=44 Score=28.38 Aligned_cols=73 Identities=15% Similarity=0.106 Sum_probs=48.4
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhcC-----------------------------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLSG----------------------------- 59 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~G----------------------------- 59 (220)
.|+.-..+|+.+.+.|.+++..... =.++.++..+++.+.-..++..+-+
T Consensus 124 dp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~ 203 (284)
T 3cx3_A 124 DPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAG 203 (284)
T ss_dssp SHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCEEEEESCCHHHHHHTTCCEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHcCCEEeeccC
Confidence 5666778899999999999864421 1234455555555554444443321
Q ss_pred -CCCCCCChHHHHHHHHHHHhhcH
Q 027702 60 -DGEVEPNADQVLQLATEVCKEDV 82 (220)
Q Consensus 60 -~~e~ep~~e~~~qL~~ei~~~dl 82 (220)
.++.||++..+++|...+-+.+.
T Consensus 204 ~~~~~eps~~~l~~l~~~ik~~~v 227 (284)
T 3cx3_A 204 ISPEQEPSPRQLTEIQEFVKTYKV 227 (284)
T ss_dssp SSTTCCCCSHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCC
Confidence 24678999999999988876653
No 25
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=47.96 E-value=36 Score=29.53 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=47.6
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhc---------------------C--------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLS---------------------G-------- 59 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~---------------------G-------- 59 (220)
.|+.-..+|+.+.+.|.+++..... =.++.+++.+++.+.-..++..+- |
T Consensus 137 dp~n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~ 216 (312)
T 2o1e_A 137 SPVLAQKEVKNITAQIVKQDPDNKEYYEKNSKEYIAKLQDLDKLYRTTAKKAEKKEFITQHTAFGYLAKEYGLKQVPIAG 216 (312)
T ss_dssp SHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCEEEESSCTTHHHHHHTTCEEEECSS
T ss_pred CHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEECCchHHHHHHCCCeEEEeec
Confidence 5666778999999999999864421 123445555555555454444432 2
Q ss_pred -CCCCCCChHHHHHHHHHHHhhc
Q 027702 60 -DGEVEPNADQVLQLATEVCKED 81 (220)
Q Consensus 60 -~~e~ep~~e~~~qL~~ei~~~d 81 (220)
.++.||++.++++|...+-+.+
T Consensus 217 ~~~~~eps~~~l~~l~~~ik~~~ 239 (312)
T 2o1e_A 217 LSPDQEPSAASLAKLKTYAKEHN 239 (312)
T ss_dssp CCSSSCCCHHHHHHHHHHTTSSC
T ss_pred cCCCCCCCHHHHHHHHHHHHHcC
Confidence 2467899999999988876654
No 26
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=47.36 E-value=92 Score=27.81 Aligned_cols=97 Identities=12% Similarity=0.072 Sum_probs=48.7
Q ss_pred cchhHHhhccHHHHHHHHHhccCcchhhhh----------------h--HHHHHHhhhHHHHHHHcCchhHHHHhhhhc-
Q 027702 117 YCCVQFIENHFELLDFLVVCYDNKEVALHC----------------G--IMLRECIKFPSLARYILESASFELFFKFVE- 177 (220)
Q Consensus 117 ~p~v~Yl~~~peil~~L~~gY~~~diAl~~----------------G--~mLREcik~e~la~~iL~~~~f~~fF~yv~- 177 (220)
.+..+++..||+.+..|..+-..+....-+ | ..+.+++.+-.-+ =....||.+.+...
T Consensus 89 ~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~---~e~~RF~~lv~~l~~ 165 (386)
T 2bnx_A 89 KFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEM---DEVERFQPLLDGLKS 165 (386)
T ss_dssp HHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHH---HTSCTTHHHHHHTST
T ss_pred HHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHh---CchhhHHHHHHHHHc
Confidence 356788888888888887776554332110 1 1222233221111 12345777776664
Q ss_pred CCChhhhhhhHHHHHHHHhcCh------hHHHHHHHhcHHHHHHh
Q 027702 178 LPTFDVASDAFSTFKDLLTKHL------TVVSEYLTAHYDEVYTH 216 (220)
Q Consensus 178 ~~~FeiasDAf~tfkelLtrHk------~lvaefL~~Nyd~Ff~~ 216 (220)
..+-|..+-++.-++-++..-. .+-+||.....++.+.+
T Consensus 166 ~~~~e~~~a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~GL~~il~~ 210 (386)
T 2bnx_A 166 GTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQE 210 (386)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHH
Confidence 4444455555555555443222 24455555555555443
No 27
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=47.15 E-value=32 Score=26.23 Aligned_cols=45 Identities=13% Similarity=0.199 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHHhhcHHH
Q 027702 40 EKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLI 84 (220)
Q Consensus 40 ~k~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~dll~ 84 (220)
++..+|++|.|..|-.-|-..+=.++..+...+|++++-+.|+-.
T Consensus 35 k~~~~D~~KRL~~LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~~ 79 (118)
T 2yru_A 35 KQVCDDISRRLALLREQWAGGKLSIPVKKRMALLVQELLHHQWDA 79 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHH
Confidence 456799999999998877755545555677888888888877643
No 28
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=45.24 E-value=71 Score=27.72 Aligned_cols=73 Identities=18% Similarity=0.169 Sum_probs=48.9
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhc------------------------------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLS------------------------------ 58 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~------------------------------ 58 (220)
.|+.-..+|+.+.+.|.+++..... =.++.++..+++.+.-.+++..|-
T Consensus 135 dp~n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~ 214 (307)
T 3ujp_A 135 SPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYM 214 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEe
Confidence 5777788999999999999864421 123445555555555444443332
Q ss_pred -C-CCCCCCChHHHHHHHHHHHhhcH
Q 027702 59 -G-DGEVEPNADQVLQLATEVCKEDV 82 (220)
Q Consensus 59 -G-~~e~ep~~e~~~qL~~ei~~~dl 82 (220)
| ..+.||++..+++|...+-+.+.
T Consensus 215 ~~i~~~~ePs~~~l~~l~~~ik~~~v 240 (307)
T 3ujp_A 215 WPINAEQQFTPKQVQTVIEEVKTNNV 240 (307)
T ss_dssp ESSCCSSCCCHHHHHHHHHHHHTTTC
T ss_pred eccCCCCCCCHHHHHHHHHHHHhcCC
Confidence 1 35688999999999998877663
No 29
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=44.14 E-value=59 Score=27.75 Aligned_cols=72 Identities=18% Similarity=0.143 Sum_probs=48.4
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhcCC----------------------------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLSGD---------------------------- 60 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~G~---------------------------- 60 (220)
.|+.-..+|+.+.+.|.+++..... =.++.++..+++.+.-..++..+-+-
T Consensus 137 dp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~ 216 (291)
T 1pq4_A 137 SPTLVKRQATTIAKELAELDPDNRDQYEANLAAFLAELERLNQELGQILQPLPQRKFIVFHPSWAYFARDYNLVQIPIEV 216 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEESSCCCHHHHHHTTCEEEESCB
T ss_pred CHHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEECCchHHHHHHCCCEEeeccc
Confidence 5777788999999999999864421 12345566666666555555544321
Q ss_pred CCCCCChHHHHHHHHHHHhhc
Q 027702 61 GEVEPNADQVLQLATEVCKED 81 (220)
Q Consensus 61 ~e~ep~~e~~~qL~~ei~~~d 81 (220)
.+.||+|..+++|...+-+.+
T Consensus 217 ~~~eps~~~l~~l~~~ik~~~ 237 (291)
T 1pq4_A 217 EGQEPSAQELKQLIDTAKENN 237 (291)
T ss_dssp TTBCCCHHHHHHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHHHHHHHcC
Confidence 246888888888888776554
No 30
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=43.57 E-value=67 Score=27.53 Aligned_cols=73 Identities=19% Similarity=0.116 Sum_probs=49.0
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhcC-----------------------------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLSG----------------------------- 59 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~G----------------------------- 59 (220)
.|+.-..+|+.+.+.|.+++..... =.++.++..+++.+.-.+++..+-+
T Consensus 128 dp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~ 207 (294)
T 3hh8_A 128 NLENGIIYSKNIAKQLIAKDPKNKETYEKNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYI 207 (294)
T ss_dssp SHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCceeec
Confidence 5677788999999999999864431 1234455666665555555544432
Q ss_pred ---CCCCCCChHHHHHHHHHHHhhcH
Q 027702 60 ---DGEVEPNADQVLQLATEVCKEDV 82 (220)
Q Consensus 60 ---~~e~ep~~e~~~qL~~ei~~~dl 82 (220)
.++.||++..+++|...+-+.+.
T Consensus 208 ~~~~~~~eps~~~l~~l~~~ik~~~v 233 (294)
T 3hh8_A 208 WEINTEEEGTPDQISSLIEKLKVIKP 233 (294)
T ss_dssp ESSCCSCCCCHHHHHHHHHHHHHSCC
T ss_pred cccCCCCCCCHHHHHHHHHHHHHcCC
Confidence 14678999999999888876653
No 31
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=42.98 E-value=58 Score=33.39 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=53.6
Q ss_pred cCcchhhhhhHHHHHHhhhHHHHHHHcC--chhHHHHhh---h-hcCCChhhhhhhHHHHHHHHhc---ChhHHHHHHHh
Q 027702 138 DNKEVALHCGIMLRECIKFPSLARYILE--SASFELFFK---F-VELPTFDVASDAFSTFKDLLTK---HLTVVSEYLTA 208 (220)
Q Consensus 138 ~~~diAl~~G~mLREcik~e~la~~iL~--~~~f~~fF~---y-v~~~~FeiasDAf~tfkelLtr---Hk~lvaefL~~ 208 (220)
++||.-..-=..||.+..|=. ..+|. ++.|..+++ | +..+..+|+.-++.++.++|.. +...+-+|..+
T Consensus 842 ~~Pe~r~~ff~ll~~~~~~~f--~~l~~l~~~~~~~~i~~i~wa~kh~~r~i~~~~l~~~~~ll~~~~~~~~~~~~F~~~ 919 (1073)
T 3gjx_A 842 EYPEHRTNFFLLLQAVNSHCF--PAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQT 919 (1073)
T ss_dssp SCHHHHHHHHHHHHHHHHHCG--GGTTTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHh--HHHHcCCHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHhhcChHHHHHHHHH
Confidence 456655555566666665511 12333 456777775 4 4899999999999999999964 55677788888
Q ss_pred cHHHHHHh
Q 027702 209 HYDEVYTH 216 (220)
Q Consensus 209 Nyd~Ff~~ 216 (220)
.|-.+..+
T Consensus 920 ~~~~~~~~ 927 (1073)
T 3gjx_A 920 YFCDILQH 927 (1073)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777544
No 32
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=41.97 E-value=72 Score=27.09 Aligned_cols=72 Identities=13% Similarity=0.025 Sum_probs=44.4
Q ss_pred CCCChHHHHHHHHHHHHhccccchhh-HHHHHHHHHHHHHHHHHhhhhhcC-----------------------------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVVE-VKALEKAMEEIEKNFVTMRCMLSG----------------------------- 59 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~~-~~~~~k~~eeisK~L~~mK~iL~G----------------------------- 59 (220)
.|+.-..+|+.+.+.|.+++...... .++.++..+++.+.-..++..+-+
T Consensus 108 dp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~ 187 (282)
T 3mfq_A 108 SIPLYKSAVAVASEELQKLLPAKAEMIQKNTEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAP 187 (282)
T ss_dssp SHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECS
T ss_pred CHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecc
Confidence 56777889999999999998644211 133444444444433333332221
Q ss_pred ---CCCCCCChHHHHHHHHHHHhhc
Q 027702 60 ---DGEVEPNADQVLQLATEVCKED 81 (220)
Q Consensus 60 ---~~e~ep~~e~~~qL~~ei~~~d 81 (220)
.++.||++.++++|...+-+.+
T Consensus 188 ~~~~~~~eps~~~l~~l~~~ik~~~ 212 (282)
T 3mfq_A 188 QGVSTDSEVANSDMIETVNLIIDHN 212 (282)
T ss_dssp SCSSSCSCCCHHHHHHHHHHHHHHT
T ss_pred cccCCCCCCCHHHHHHHHHHHHHcC
Confidence 1356788888888888776655
No 33
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=41.49 E-value=54 Score=25.64 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=48.5
Q ss_pred CCCChHHHHHHHHHHHhhcHHH----HHHhcCCCCCchhhhcHHHHHHHhhh--c--ccCCccchhHHhhccHHHHHHHH
Q 027702 63 VEPNADQVLQLATEVCKEDVLI----LLVHKLPILGWEARKDLVHCWSILLK--Q--KVDSTYCCVQFIENHFELLDFLV 134 (220)
Q Consensus 63 ~ep~~e~~~qL~~ei~~~dll~----~Li~~L~~L~FE~RKdv~~If~~llR--~--~~~~~~p~v~Yl~~~peil~~L~ 134 (220)
-.|++....+||+..|+.+-+. .|-..|. +..|.-.+||.+|.= + ..|+.. +|+++..|..+|..|-
T Consensus 19 wGP~~~~m~eIa~~T~~~~~~~~Im~~l~kRL~----d~~k~Wr~vyKaL~lleyLl~nGse~-vv~~~~~~~~~i~~L~ 93 (144)
T 1eyh_A 19 WGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLN----DHGKNWRHVYKAMTLMEYLIKTGSER-VSQQCKENMYAVQTLK 93 (144)
T ss_dssp SCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHS----CCGGGHHHHHHHHHHHHHHHHHSCHH-HHHHHHHTHHHHHGGG
T ss_pred CCCCHHHHHHHHHHhCCHhhHHHHHHHHHHHHc----cCCcchHHHhHHHHHHHHHHHhCCHH-HHHHHHHhhHHHhhhc
Confidence 4577778888888877765333 3333332 234666666665541 0 012221 3444444444444442
Q ss_pred HhccCcc-hhhhhhHHHHHHhhhHHHHHHHcCc
Q 027702 135 VCYDNKE-VALHCGIMLRECIKFPSLARYILES 166 (220)
Q Consensus 135 ~gY~~~d-iAl~~G~mLREcik~e~la~~iL~~ 166 (220)
.|...| -.--.|.-+|+-. +.|...|-.+
T Consensus 94 -~F~y~d~~g~D~G~~VR~ka--k~l~~Ll~D~ 123 (144)
T 1eyh_A 94 -DFQYVDRDGKDQGVNVREKA--KQLVALLRDE 123 (144)
T ss_dssp -GCCCBCTTSCBCHHHHHHHH--HHHHHHHHCH
T ss_pred -cceeeCCCccchHHHHHHHH--HHHHHHHCCH
Confidence 232111 2334788888755 5566644444
No 34
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=41.31 E-value=1e+02 Score=27.80 Aligned_cols=116 Identities=9% Similarity=0.104 Sum_probs=61.7
Q ss_pred HHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhcc--Ccchhhhhh----H
Q 027702 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCG----I 148 (220)
Q Consensus 75 ~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~--~~diAl~~G----~ 148 (220)
+.+...+++..|+..|..=+++.|+.++....|+.... ....+.||... .++..|+.-.+ ++++-..+= .
T Consensus 352 ~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~---~~~~~~~L~~~-g~i~~L~~LL~~~d~~i~~~~L~aL~n 427 (510)
T 3ul1_B 352 QQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGG---TVEQIVYLVHC-GIIEPLMNLLSAKDTKIIQVILDAISN 427 (510)
T ss_dssp HHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC---CHHHHHHHHHT-TCHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccC---CHHHHHHHHHC-CCHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 34666789999999999999999999999999987632 12234444432 22223322222 233222221 2
Q ss_pred HHHHHh---hhHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHH
Q 027702 149 MLRECI---KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDL 194 (220)
Q Consensus 149 mLREci---k~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkel 194 (220)
||+-.- ..+.++..|-+...+.++-+.-..+|=+|..-|+..+...
T Consensus 428 il~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~~A~~iie~y 476 (510)
T 3ul1_B 428 IFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKY 476 (510)
T ss_dssp HHHHHHTTTCHHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHhHhccchHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 222111 1234444444444444444444556666666555554433
No 35
>3onk_A Epsin-3, ENT3; helix, protein transport; 2.09A {Saccharomyces cerevisiae} PDB: 3onl_A
Probab=41.14 E-value=53 Score=25.98 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=56.8
Q ss_pred CCCChHHHHHHHHHHHhhcHHHHHHhcCCC-CCchhhhcHHHHHHHh------hhcccCCccchhHHhhccHHHHHHHHH
Q 027702 63 VEPNADQVLQLATEVCKEDVLILLVHKLPI-LGWEARKDLVHCWSIL------LKQKVDSTYCCVQFIENHFELLDFLVV 135 (220)
Q Consensus 63 ~ep~~e~~~qL~~ei~~~dll~~Li~~L~~-L~FE~RKdv~~If~~l------lR~~~~~~~p~v~Yl~~~peil~~L~~ 135 (220)
-.|++....++|+..|+.+.+..+...|.+ |.=...|.--+||.+| ++. |+ .-+|+.+..|..+|..|-
T Consensus 25 wGp~~~~m~eIa~~T~~~~~~~eIm~~l~kRL~d~~~k~WR~vyKaL~lLeyLl~n--Gs-e~vv~~~r~~~~~i~~L~- 100 (150)
T 3onk_A 25 WGASSTLMDQISQGTYNFREREEILSMIFRRFTEKAGSEWRQIYKALQLLDYLIKH--GS-ERFIDDTRNSINLIRILE- 100 (150)
T ss_dssp SCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHH--SC-HHHHHHHHTTHHHHHGGG-
T ss_pred CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHh--CC-HHHHHHHHHHHHHHHhhh-
Confidence 458888899999988887655544444332 2111245555555544 332 32 235667777777777763
Q ss_pred hccCcc-hhhhhhHHHHHHhhhHHHHHHHcCc
Q 027702 136 CYDNKE-VALHCGIMLRECIKFPSLARYILES 166 (220)
Q Consensus 136 gY~~~d-iAl~~G~mLREcik~e~la~~iL~~ 166 (220)
-|...| -.--.|.-+|+-. +.++..|-.+
T Consensus 101 ~F~~~d~~G~D~G~~VR~ka--k~l~~LL~D~ 130 (150)
T 3onk_A 101 TFHYIDSQGRDQGINVRTRV--KALIELLSDD 130 (150)
T ss_dssp GCCCBCTTSCBCHHHHHHHH--HHHHHHHTCH
T ss_pred cccccCCCCCchHHHHHHHH--HHHHHHHcCH
Confidence 343332 2445788888755 6666644443
No 36
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=40.47 E-value=74 Score=27.53 Aligned_cols=72 Identities=19% Similarity=0.082 Sum_probs=46.4
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhc-----------------------C------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLS-----------------------G------ 59 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~-----------------------G------ 59 (220)
.|+.-..+|+.+.+.|.+++..... =.++.++..+++.+.-..++..+- |
T Consensus 142 dp~n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~ 221 (313)
T 1toa_A 142 DVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGL 221 (313)
T ss_dssp SHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEe
Confidence 5667778999999999999864421 123344454444444333333332 1
Q ss_pred ---CCCCCCChHHHHHHHHHHHhhc
Q 027702 60 ---DGEVEPNADQVLQLATEVCKED 81 (220)
Q Consensus 60 ---~~e~ep~~e~~~qL~~ei~~~d 81 (220)
.++.||++..+++|.+.+-+.+
T Consensus 222 ~~~~~~~eps~~~l~~l~~~ik~~~ 246 (313)
T 1toa_A 222 QGVSTASEASAHDMQELAAFIAQRK 246 (313)
T ss_dssp ECSSCSSCCCHHHHHHHHHHHHHTT
T ss_pred eccCCCCCCCHHHHHHHHHHHHHcC
Confidence 2478899999999998886665
No 37
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=39.71 E-value=1.7e+02 Score=24.69 Aligned_cols=117 Identities=13% Similarity=0.113 Sum_probs=77.4
Q ss_pred HHhhcHHHHHHhcCCC-CCchhhhcHHHHHHHhhhcc-cCCccchhHHhhccHHHHHHHHHhc--cCcchhhhhhHHHHH
Q 027702 77 VCKEDVLILLVHKLPI-LGWEARKDLVHCWSILLKQK-VDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRE 152 (220)
Q Consensus 77 i~~~dll~~Li~~L~~-L~FE~RKdv~~If~~llR~~-~~~~~p~v~Yl~~~peil~~L~~gY--~~~diAl~~G~mLRE 152 (220)
+...+.+..|+..|.. -+-+.|..++..+.++.+.. +..+. ..+ ..++..|+.-- +++++-..+...|+.
T Consensus 145 ~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~---~~~---~~~l~~L~~~l~~~~~~v~~~a~~~L~~ 218 (450)
T 2jdq_A 145 VLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEF---AKV---SPCLNVLSWLLFVSDTDVLADACWALSY 218 (450)
T ss_dssp HHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCG---GGT---GGGHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCH---HHH---HHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 3445788889998885 67889999999999998754 22221 222 33444443333 344555556666666
Q ss_pred Hhhh-HHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcCh
Q 027702 153 CIKF-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHL 199 (220)
Q Consensus 153 cik~-e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk 199 (220)
...+ ....+.+.....+..+.+.+..++-++...|..++..+.+...
T Consensus 219 l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 266 (450)
T 2jdq_A 219 LSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDD 266 (450)
T ss_dssp HTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCCh
Confidence 6654 3444555556677788888888888999999888887766544
No 38
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=39.42 E-value=1.4e+02 Score=25.35 Aligned_cols=122 Identities=11% Similarity=0.095 Sum_probs=76.8
Q ss_pred HHhhcHHHHHHhcCCC-CCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhc--cCcchhhhhhHHHHHH
Q 027702 77 VCKEDVLILLVHKLPI-LGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLREC 153 (220)
Q Consensus 77 i~~~dll~~Li~~L~~-L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~diAl~~G~mLREc 153 (220)
+.+.+.+..|+..|.. -+-+.|+.++-..+++.|... |..+-+... ..+..|+..- .++++-..+-..|...
T Consensus 120 vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~----~~~~~~~~~-ggi~~L~~lL~~~d~~v~~~A~~aLs~L 194 (296)
T 1xqr_A 120 VLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQE----AGLLQFLRL-DGFSVLMRAMQQQVQKLKVKSAFLLQNL 194 (296)
T ss_dssp HHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCH----HHHHHHHHT-THHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCc----HHHHHHHHC-CCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4556777777777753 356789999999999987432 222323322 1333333222 2344433344444443
Q ss_pred hh-hHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHH
Q 027702 154 IK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVS 203 (220)
Q Consensus 154 ik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lva 203 (220)
.. .+...+.+.....+..+.+.+..++.+|-.-|..++..+++-....+.
T Consensus 195 ~~~~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~~~~~~~ 245 (296)
T 1xqr_A 195 LVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVR 245 (296)
T ss_dssp HHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhCChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhCChhHHH
Confidence 33 355666677777888888888999999998999999888887655443
No 39
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=38.60 E-value=2e+02 Score=26.89 Aligned_cols=121 Identities=10% Similarity=0.155 Sum_probs=72.5
Q ss_pred cHHHHHHhcCCCC--CchhhhcHHHHHHHhhhcccCCccchhHHhhcc-HHHHHHHHHhccCc----chhhhhhHHHHHH
Q 027702 81 DVLILLVHKLPIL--GWEARKDLVHCWSILLKQKVDSTYCCVQFIENH-FELLDFLVVCYDNK----EVALHCGIMLREC 153 (220)
Q Consensus 81 dll~~Li~~L~~L--~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~-peil~~L~~gY~~~----diAl~~G~mLREc 153 (220)
+++..|+..+..= +-+.|+.+..++..+...-. | +.+..+ |.++..++.+..++ ++-..+-..|..+
T Consensus 128 ~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~----~--~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~ 201 (876)
T 1qgr_A 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDID----P--EQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNS 201 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSC----H--HHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcC----H--hhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 4677777777655 66788888888888886421 1 223443 88888888887655 3333344444444
Q ss_pred hhh-H-HHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHHHHHH
Q 027702 154 IKF-P-SLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLT 207 (220)
Q Consensus 154 ik~-e-~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lvaefL~ 207 (220)
+.+ + .+......+..+..+++.++.++.++..-|+..+..+..++...+..++.
T Consensus 202 ~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~ 257 (876)
T 1qgr_A 202 LEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMG 257 (876)
T ss_dssp GGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 432 0 11000000011223345667788889888999999988877766555554
No 40
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=36.48 E-value=2.2e+02 Score=25.06 Aligned_cols=118 Identities=11% Similarity=0.073 Sum_probs=75.9
Q ss_pred HHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhcc---CcchhhhhhHHHH
Q 027702 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD---NKEVALHCGIMLR 151 (220)
Q Consensus 75 ~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~---~~diAl~~G~mLR 151 (220)
+.+...+.+..|+..|..=+-+.|..+..+.+++.... ....+.+.. ..++..|+..-. ++++--.+-..|.
T Consensus 280 ~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~----~~~~~~~~~-~~~l~~L~~lL~~~~~~~v~~~A~~~L~ 354 (528)
T 4b8j_A 280 QAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGD----DAQTQCIID-HQALPCLLSLLTQNLKKSIKKEACWTIS 354 (528)
T ss_dssp HHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC----HHHHHHHHT-TTHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCC----HHHHHHHHH-hhhHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 45566688899999998888888888888888887522 122333333 333333333222 4455545555555
Q ss_pred HHhh-hHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhc
Q 027702 152 ECIK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 152 Ecik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtr 197 (220)
.+.. .+.....++....+..+.+.++.+++++-..|...+..+...
T Consensus 355 nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~ 401 (528)
T 4b8j_A 355 NITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSG 401 (528)
T ss_dssp HHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcC
Confidence 5543 444555666666777888888888888888888877776554
No 41
>1inz_A EPS15-interacting portein(epsin); alpha-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.118.9.1
Probab=36.46 E-value=43 Score=26.40 Aligned_cols=92 Identities=14% Similarity=0.173 Sum_probs=48.7
Q ss_pred CCCChHHHHHHHHHHHhhcHHH----HHHhcCCCCCchhhhcHHHHHHHhh------hcccCCccchhHHhhccHHHHHH
Q 027702 63 VEPNADQVLQLATEVCKEDVLI----LLVHKLPILGWEARKDLVHCWSILL------KQKVDSTYCCVQFIENHFELLDF 132 (220)
Q Consensus 63 ~ep~~e~~~qL~~ei~~~dll~----~Li~~L~~L~FE~RKdv~~If~~ll------R~~~~~~~p~v~Yl~~~peil~~ 132 (220)
-.|++...++||+..|+.+-+. .|-..|. +..|.-.+||.+|. +. |+. -+|+++..|..+|..
T Consensus 37 wGP~~~~m~eIa~~T~~~~~~~eIm~~l~kRL~----d~~k~WR~vyKaL~lleyLl~n--Gse-~vv~~~r~~~~~I~~ 109 (148)
T 1inz_A 37 WGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLN----DHGKNWRHVYKAMTLMEYLIKT--GSE-RVSQQCKENMYAVQT 109 (148)
T ss_dssp CCCCSCHHHHHHHHHTSSHHHHHHHHHHHHGGG----CCSSCTHHHHHHHHHHHHHHHT--TCH-HHHHHHHHTHHHHHH
T ss_pred CCcCHHHHHHHHHHhCCHhhHHHHHHHHHHHHc----cCCcchhHhhHHHHHHHHHHHh--CCH-HHHHHHHHhHHHHHh
Confidence 3477778888888887765333 3333332 23455556665543 21 222 245555556555666
Q ss_pred HHHhccCcc-hhhhhhHHHHHHhhhHHHHHHHc
Q 027702 133 LVVCYDNKE-VALHCGIMLRECIKFPSLARYIL 164 (220)
Q Consensus 133 L~~gY~~~d-iAl~~G~mLREcik~e~la~~iL 164 (220)
|-. |...| -.--.|.-+|+-. +.+...|-
T Consensus 110 L~~-F~y~d~~g~D~G~nVR~kA--k~l~~LL~ 139 (148)
T 1inz_A 110 LKD-FQYVDRDGKDQGVNVREKA--KQLVALLR 139 (148)
T ss_dssp HHH-CCCCCSSCCCCCHHHHHHH--HHHHHHHT
T ss_pred hcc-eeeeCCCCcCchHHHHHHH--HHHHHHhC
Confidence 643 22111 2334788888755 45555433
No 42
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=36.21 E-value=96 Score=26.97 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=46.7
Q ss_pred CCCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhc-----------------------C------
Q 027702 10 RPKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLS-----------------------G------ 59 (220)
Q Consensus 10 ~~ktP~elVr~~~e~l~~L~~~~~~-~~~~~~k~~eeisK~L~~mK~iL~-----------------------G------ 59 (220)
.|+.-..+|+.+.+.|.+++..... =.++.++..+++.+.-..++..+- |
T Consensus 149 dp~n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~~~ 228 (321)
T 1xvl_A 149 SPRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYM 228 (321)
T ss_dssp SHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEEEe
Confidence 5667778999999999999864421 123444555554444443333322 1
Q ss_pred ---CCCCCCChHHHHHHHHHHHhhc
Q 027702 60 ---DGEVEPNADQVLQLATEVCKED 81 (220)
Q Consensus 60 ---~~e~ep~~e~~~qL~~ei~~~d 81 (220)
.++.||++..+++|...+-+.+
T Consensus 229 ~~~~~~~eps~~~l~~l~~~ik~~~ 253 (321)
T 1xvl_A 229 WPINAEQQFTPKQVQTVIEEVKTNN 253 (321)
T ss_dssp ESSSSSCSCCHHHHHHHHHHHHTTT
T ss_pred eccCCCCCCCHHHHHHHHHHHHHcC
Confidence 2467899999999988886665
No 43
>1ddb_A Protein (BID); apoptosis, programmed cell death, BCL-2 family, BH3 domain; NMR {Mus musculus} SCOP: f.1.4.1
Probab=35.95 E-value=18 Score=30.12 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHHhhc------------HHHHHHhcCCCCCchhhhcHHHHHHH
Q 027702 40 EKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKED------------VLILLVHKLPILGWEARKDLVHCWSI 107 (220)
Q Consensus 40 ~k~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~d------------ll~~Li~~L~~L~FE~RKdv~~If~~ 107 (220)
+.+.-+|+..|.+|-.-|.+.- .|..|..|+..+.+.+ .+..|++..| -|+|.-| +..+++-
T Consensus 80 ee~ir~IA~qLa~igD~le~sI----~p~~v~~L~~~~~N~slsEEdrr~~LAaaleql~Qt~P-~dmekEk-~~L~lam 153 (195)
T 1ddb_A 80 EEIIHNIARHLAQIGDEMDHNI----QPTLVRQLAAQFMNGSLSEEDKRNCLAKALDEVKTAFP-RDMENDK-AMLIMTM 153 (195)
T ss_dssp CCSHHHHHHHHHHHHHHHGGGC----CSSSHHHHHHHHCCSSSSSSSTTHHHHHHHHHHHHHSC-STHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccc----CHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHcC-chHHHHH-HHHHHHH
Confidence 4566689999999999888833 3467777877776433 4667888888 6776544 5667788
Q ss_pred hhhcccCCccc
Q 027702 108 LLKQKVDSTYC 118 (220)
Q Consensus 108 llR~~~~~~~p 118 (220)
+|-.++-+..|
T Consensus 154 LLaKKVa~htP 164 (195)
T 1ddb_A 154 LLAKKVASHAP 164 (195)
T ss_dssp HHHHHHHHHCT
T ss_pred HHHHHHHHhCh
Confidence 88777655544
No 44
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=35.13 E-value=1.4e+02 Score=23.17 Aligned_cols=95 Identities=6% Similarity=-0.049 Sum_probs=57.0
Q ss_pred CChHHHHHHHHHHHhh------cHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHH--Hh
Q 027702 65 PNADQVLQLATEVCKE------DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLV--VC 136 (220)
Q Consensus 65 p~~e~~~qL~~ei~~~------dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~--~g 136 (220)
|.--...++|+..++. .++..|..-|..=.-..+--+-+|...|++ .+...++..+..|..+|..|. +|
T Consensus 27 ~pgylm~EIA~~T~~s~~~~~~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~---~Gs~~f~~~~r~~~~~Ik~l~~F~g 103 (140)
T 1vdy_A 27 APVYKLEEICDLLRSSHVSIVKEFSEFILKRLDNKSPIVKQKALRLIKYAVG---KSGSEFRREMQRNSVAVRNLFHYKG 103 (140)
T ss_dssp CCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTT---TSCHHHHHHHHHTTHHHHTTTTCCC
T ss_pred CcHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcCCCcceeehHHHHHHHHHH---hCCHHHHHHHHHhHHHHHHHHhcCC
Confidence 4445678888887774 356677777766555544455556666654 223446777777777777774 34
Q ss_pred ccCcchhhhhhHHHHHHhhhHHHHHHHc
Q 027702 137 YDNKEVALHCGIMLRECIKFPSLARYIL 164 (220)
Q Consensus 137 Y~~~diAl~~G~mLREcik~e~la~~iL 164 (220)
..+|--.=.-|...|+-. ..+...|.
T Consensus 104 ~~dp~~G~d~g~~VR~~A--kEl~~ll~ 129 (140)
T 1vdy_A 104 HPDPLKGDALNKAVRETA--HETISAIF 129 (140)
T ss_dssp CCCTTTSSCHHHHHHHHH--HHHHHHHT
T ss_pred CCCcccccchhHHHHHHH--HHHHHHHh
Confidence 434323445778888766 34444443
No 45
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=33.75 E-value=1.5e+02 Score=25.74 Aligned_cols=31 Identities=19% Similarity=0.055 Sum_probs=19.4
Q ss_pred hhcHHHHHHhcCCCCCchhhhcHHHHHHHhh
Q 027702 79 KEDVLILLVHKLPILGWEARKDLVHCWSILL 109 (220)
Q Consensus 79 ~~dll~~Li~~L~~L~FE~RKdv~~If~~ll 109 (220)
+.+.+..|+..|..=+.+.|..++....++-
T Consensus 141 ~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la 171 (529)
T 1jdh_A 141 LAGGLQKMVALLNKTNVKFLAITTDCLQILA 171 (529)
T ss_dssp HHTHHHHHHHGGGCCCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 4567778888877655555555555555554
No 46
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=32.88 E-value=2.1e+02 Score=27.96 Aligned_cols=100 Identities=6% Similarity=-0.007 Sum_probs=49.4
Q ss_pred CCchhhhcHHHHHHHhhhcccCC-----ccchhHHhhccHHHHHHHHHhccCcchhhhhhHHHHHHhhhHHHHHHHcCch
Q 027702 93 LGWEARKDLVHCWSILLKQKVDS-----TYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILESA 167 (220)
Q Consensus 93 L~FE~RKdv~~If~~llR~~~~~-----~~p~v~Yl~~~peil~~L~~gY~~~diAl~~G~mLREcik~e~la~~iL~~~ 167 (220)
.+-+.|--++.++.|.+++.-.. ..|.-+.-.=+..++..|... .+.+....|..+...++++--. =+.+
T Consensus 49 ~~~~vR~~A~i~lkn~i~~~w~~~~~~~~l~~~~k~~ik~~ll~~l~~~--~~~ir~~l~~~ia~ia~~d~p~---~Wp~ 123 (960)
T 1wa5_C 49 LPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISL--PNNLQVQIGEAISSIADSDFPD---RWPT 123 (960)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCHHHHHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHSTT---TCTT
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhhCcc---chhH
Confidence 35667777777777777654321 112111111123344444432 2445555555555555543221 1233
Q ss_pred hHHHHhhhhcCCChhhhhhhHHHHHHHHhc
Q 027702 168 SFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 168 ~f~~fF~yv~~~~FeiasDAf~tfkelLtr 197 (220)
.+-.+++.++.++...---|+.++.+++.+
T Consensus 124 ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~ 153 (960)
T 1wa5_C 124 LLSDLASRLSNDDMVTNKGVLTVAHSIFKR 153 (960)
T ss_dssp HHHHHHTTCCSSCTTHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 445555666666555555566666666553
No 47
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=32.21 E-value=2.9e+02 Score=27.48 Aligned_cols=106 Identities=15% Similarity=0.094 Sum_probs=64.1
Q ss_pred HHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhccCcc--hhhhhhHHHHHHhhhHHH
Q 027702 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKE--VALHCGIMLRECIKFPSL 159 (220)
Q Consensus 82 ll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY~~~d--iAl~~G~mLREcik~e~l 159 (220)
++..|+..|..=+.+.|+-++...+.+...- +. . ..+.|+..|+.+..+++ +-..++.-|..++.+-.-
T Consensus 49 il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~-----~~-~---~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~ 119 (1230)
T 1u6g_C 49 VVKMILKLLEDKNGEVQNLAVKCLGPLVSKV-----KE-Y---QVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPP 119 (1230)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS-----CH-H---HHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC-----CH-H---HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCC
Confidence 3445566666668889999998888887522 11 2 23788888988865443 333344444444321100
Q ss_pred -------HHHHcCchhHHHHhhhhc-CCChhhhhhhHHHHHHHHhc
Q 027702 160 -------ARYILESASFELFFKFVE-LPTFDVASDAFSTFKDLLTK 197 (220)
Q Consensus 160 -------a~~iL~~~~f~~fF~yv~-~~~FeiasDAf~tfkelLtr 197 (220)
.. -.....+-.+++.++ .++.++..-|+.++.+++..
T Consensus 120 ~~~~~~~~~-~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~ 164 (1230)
T 1u6g_C 120 ASSGSALAA-NVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSR 164 (1230)
T ss_dssp ----CCTHH-HHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHH
T ss_pred cccccchHH-HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 00 001123445667777 58899999999999998853
No 48
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=31.79 E-value=2.8e+02 Score=24.79 Aligned_cols=117 Identities=9% Similarity=0.049 Sum_probs=65.3
Q ss_pred HHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHh--ccCcchhhhhhHHHHH
Q 027702 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVC--YDNKEVALHCGIMLRE 152 (220)
Q Consensus 75 ~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~g--Y~~~diAl~~G~mLRE 152 (220)
+.+...+.+..|+..|..=+-+.+..+.....++...... ....+.. ..++..|+.- -.++++--.+-..|..
T Consensus 268 ~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~----~~~~i~~-~g~l~~L~~LL~~~~~~v~~~A~~aL~n 342 (510)
T 3ul1_B 268 EMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE----QTQKVID-AGALAVFPSLLTNPKTNIQKEATWTMSN 342 (510)
T ss_dssp HHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTGGGGCC-CTTCSSHHHHHHHHHHHHH
T ss_pred HHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHH----HHHHHhh-ccchHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 3456677888888888887777888888878777642211 0111111 0111111111 1122332333333333
Q ss_pred Hh-hhHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHh
Q 027702 153 CI-KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLT 196 (220)
Q Consensus 153 ci-k~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLt 196 (220)
+. ..+.....+.....+..+.+.+..+++++-..|..++.-+..
T Consensus 343 l~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~ 387 (510)
T 3ul1_B 343 ITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTS 387 (510)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence 33 345555566666677788888888889888877776665543
No 49
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=31.38 E-value=2.9e+02 Score=24.77 Aligned_cols=117 Identities=9% Similarity=0.070 Sum_probs=69.5
Q ss_pred HHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhcc--HHHHHHHHHhccCcchhhhhhHHHHH
Q 027702 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH--FELLDFLVVCYDNKEVALHCGIMLRE 152 (220)
Q Consensus 75 ~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~--peil~~L~~gY~~~diAl~~G~mLRE 152 (220)
+.+...+.+..|+..|..=+-+.+..+.....++...... ....+... -..|..|+.. .++++--.+...|..
T Consensus 287 ~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~----~~~~i~~~g~l~~L~~LL~~-~~~~i~~~a~~aL~n 361 (529)
T 3tpo_A 287 EMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE----QTQKVIDAGALAVFPSLLTN-PKTNIQKEATWTMSN 361 (529)
T ss_dssp HHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHHTTGGGGHHHHTTC-SSHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchH----HHHHHhhcccHHHHHHHHcC-CCHHHHHHHHHHHHH
Confidence 3456677888888888887888888888888887642211 11222211 1122222221 223333334444444
Q ss_pred Hhh-hHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHh
Q 027702 153 CIK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLT 196 (220)
Q Consensus 153 cik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLt 196 (220)
+.. .+.....+.....+..+...+..+++++-..|..++.-+..
T Consensus 362 l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~ 406 (529)
T 3tpo_A 362 ITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTS 406 (529)
T ss_dssp HHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred HhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 433 45555566666677788888899999988888777766544
No 50
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=31.24 E-value=1.4e+02 Score=30.26 Aligned_cols=78 Identities=17% Similarity=0.186 Sum_probs=55.1
Q ss_pred cCcchhhhhhHHHHHHhhhHHHHHHHcC--chhHHHHhhh----hcCCChhhhhhhHHHHHHHHhc-----ChhHHHHHH
Q 027702 138 DNKEVALHCGIMLRECIKFPSLARYILE--SASFELFFKF----VELPTFDVASDAFSTFKDLLTK-----HLTVVSEYL 206 (220)
Q Consensus 138 ~~~diAl~~G~mLREcik~e~la~~iL~--~~~f~~fF~y----v~~~~FeiasDAf~tfkelLtr-----Hk~lvaefL 206 (220)
++||.-..-=.+|+.++.|-.- .+|. ++.|..+++. +..+.-||+.-++.++.|++.+ ....+-+|.
T Consensus 816 ~~Pe~r~~ff~ll~~~~~~~f~--~~~~~~~~~~~~~~~~~~~a~~h~~r~~~~~~l~~~~~ll~~~~~~~~~~~~~~f~ 893 (1023)
T 4hat_C 816 EYPEHRVEFYKLLKVINEKSFA--AFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEFH 893 (1023)
T ss_dssp SSHHHHHHHHHHHHHHHHHCTH--HHHTSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHChH--HHHcCCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 4677666666666666655222 2444 3478888873 5889999999999999999962 345677888
Q ss_pred HhcHHHHHHhh
Q 027702 207 TAHYDEVYTHL 217 (220)
Q Consensus 207 ~~Nyd~Ff~~y 217 (220)
...|-.++.+.
T Consensus 894 ~~~~~~~~~~~ 904 (1023)
T 4hat_C 894 KNYFFIFVSET 904 (1023)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888775543
No 51
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=30.78 E-value=1.1e+02 Score=24.37 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHhhhhhcC----CCCCCCChHHHHHHHHHH
Q 027702 42 AMEEIEKNFVTMRCMLSG----DGEVEPNADQVLQLATEV 77 (220)
Q Consensus 42 ~~eeisK~L~~mK~iL~G----~~e~ep~~e~~~qL~~ei 77 (220)
..+++..+..-|..+|.. +....+..|.+.+|++.+
T Consensus 61 eLe~V~~nv~LL~EML~~~~pg~~~~~~d~Ell~eL~~~C 100 (158)
T 1naf_A 61 AIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRC 100 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTC-----CCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcCCCcccHHHHHHHHHHH
Confidence 344554445555555653 222111445555555544
No 52
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=29.78 E-value=2.9e+02 Score=24.39 Aligned_cols=122 Identities=7% Similarity=-0.053 Sum_probs=77.1
Q ss_pred HhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHh--ccCcchhhhhhHHHHHHhh
Q 027702 78 CKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVC--YDNKEVALHCGIMLRECIK 155 (220)
Q Consensus 78 ~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~g--Y~~~diAl~~G~mLREcik 155 (220)
...+.+..|+..|..-+-+.|..++....++.+..... +..... ..++..|+.- -+++++-..+-..|.....
T Consensus 212 ~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~--~~~~~~---~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~ 286 (530)
T 1wa5_B 212 LQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQ--PDWSVV---SQALPTLAKLIYSMDTETLVDACWAISYLSD 286 (530)
T ss_dssp HHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSC--CCHHHH---GGGHHHHHHHTTCCCHHHHHHHHHHHHHHHS
T ss_pred HHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCC--CcHHHH---HhHHHHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 44567888888888777888999999999998754111 111122 2233333322 2345555555666666554
Q ss_pred h-HHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHHH
Q 027702 156 F-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSE 204 (220)
Q Consensus 156 ~-e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lvae 204 (220)
. +.....++....+..+.+.+..++-+|...|..++..+.+........
T Consensus 287 ~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 336 (530)
T 1wa5_B 287 GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQV 336 (530)
T ss_dssp SCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHH
Confidence 3 444555666667778888888888888888888888777655443333
No 53
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=29.74 E-value=2.2e+02 Score=23.23 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhhhhhcCC--CCCCC--ChHHHHHHHHHHH
Q 027702 42 AMEEIEKNFVTMRCMLSGD--GEVEP--NADQVLQLATEVC 78 (220)
Q Consensus 42 ~~eeisK~L~~mK~iL~G~--~e~ep--~~e~~~qL~~ei~ 78 (220)
..+++..+..-|..+|..- ++..+ ..|...+|++.+-
T Consensus 77 eLe~V~~nv~LL~EML~~~~pg~~~~~~d~Ell~eL~~~Ck 117 (186)
T 1oxz_A 77 AIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCE 117 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSCSCTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccCccccHHHHHHHHHHHH
Confidence 3344444666666666632 22222 4566666665543
No 54
>2gd5_A Charged multivesicular BODY protein 3; CHMP3, ESCRT-III, protein transport; 2.80A {Homo sapiens} PDB: 3frv_A
Probab=29.35 E-value=71 Score=25.45 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=33.2
Q ss_pred CChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHHhh
Q 027702 12 KTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKE 80 (220)
Q Consensus 12 ktP~elVr~~~e~l~~L~~~~~~~~~~~~k~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~ 80 (220)
+||.|.+|...-.|.+ ....=++...|...+-.|.-..||...-+ .+.+.+..+|.++.+.
T Consensus 6 ~~p~e~lr~~~~~L~~---~~r~Ldr~~~kle~~ekk~~~~Ikka~k~-----g~~~~aki~Ak~lvr~ 66 (179)
T 2gd5_A 6 KPPKELVNEWSLKIRK---EMRVVDRQIRDIQREEEKVKRSVKDAAKK-----GQKDVCIVLAKEMIRS 66 (179)
T ss_dssp --CCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHH
Confidence 4888877655555543 11112233345555555666666665543 3567777788877654
No 55
>2jqq_A Conserved oligomeric golgi complex subunit 2; protein, helical bundle, vesicular transport, tethering, protein transport; NMR {Saccharomyces cerevisiae}
Probab=27.76 E-value=79 Score=26.43 Aligned_cols=63 Identities=14% Similarity=0.091 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHhccccchhhHHHHHH--HHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHHh
Q 027702 14 PLEVVKATKVSLMALDIKTVVEVKALEK--AMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCK 79 (220)
Q Consensus 14 P~elVr~~~e~l~~L~~~~~~~~~~~~k--~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~~ 79 (220)
..|.|....|-|.+||.-.+ .-.+-.+ -.=+++|.|..-=+.++|+++ -.+|.|..|+.++++
T Consensus 74 Tre~v~d~l~YLkkLD~l~~-~Lq~h~~Lse~l~l~kqLs~sLh~mC~~~p--ld~eLc~~l~~qL~~ 138 (204)
T 2jqq_A 74 TQEIIKDVLEYLKKLDEIYG-SLRNHSQLTEALSLGKRLSKSLHEMCGIEP--LEEEICSGLIEQLYK 138 (204)
T ss_dssp THHHHHHHHHHHHHHHHHHH-TCSSSSHHHHHHHHHHHHHHHHHHHHTSSC--CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHhCCCC--CcHHHHHHHHHHHHH
Confidence 36777777777777774110 0000011 123677777777777888875 446788888888764
No 56
>2bid_A Protein (BID); programmed cell death, apoptosis regulation and amplification; NMR {Homo sapiens} SCOP: f.1.4.1
Probab=27.26 E-value=96 Score=25.74 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHHhhcHHHH
Q 027702 40 EKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLIL 85 (220)
Q Consensus 40 ~k~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~dll~~ 85 (220)
+.+.-.|+++|.+|-.-+.+. -.|..|..|+..+.+.++...
T Consensus 82 Eeiir~IA~qLAqiGD~md~s----I~P~lV~~La~qf~N~~lsEE 123 (197)
T 2bid_A 82 EDIIRNIARHLAQVGDSMDRS----IPPGLVNGLALQLRNTSRSEE 123 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----CCTTCHHHHHHHHHSGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc----CChHHHHHHHHHHHhcCccHH
Confidence 667778999999999988883 445788889888888776553
No 57
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=25.50 E-value=5e+02 Score=25.66 Aligned_cols=128 Identities=13% Similarity=0.189 Sum_probs=84.0
Q ss_pred HHHHHHhhcHHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhccHHHHHHHHHhc--cCcchhhhhhHHH
Q 027702 73 LATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIML 150 (220)
Q Consensus 73 L~~ei~~~dll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~diAl~~G~mL 150 (220)
..+.+.+.+.+..|+..|..=+-..|+.++...+|+.... .....+....+.+..|+.-- ++.++--.+...|
T Consensus 615 ~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~-----~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~AL 689 (810)
T 3now_A 615 VRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSE-----DVIKMFEGNNDRVKFLALLCEDEDEETATACAGAL 689 (810)
T ss_dssp HHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSH-----HHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCh-----HHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHH
Confidence 3445666676777776665555667888888888887521 12233333344555554433 3445555566666
Q ss_pred HHHhh-hHHHHHHHcC-chhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHHHHHH
Q 027702 151 RECIK-FPSLARYILE-SASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYL 206 (220)
Q Consensus 151 REcik-~e~la~~iL~-~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lvaefL 206 (220)
.-... ++..++.++. ...+..+.+.+..+++++.--|...+.-+.+.-+. .++++
T Consensus 690 anLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e-~~~~l 746 (810)
T 3now_A 690 AIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGEE-IAKKL 746 (810)
T ss_dssp HHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCHH-HHHHH
T ss_pred HHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCHH-HHHHH
Confidence 66655 6888888888 56777888999999999999999999888773333 34444
No 58
>1bh9_A TAFII18; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_A*
Probab=24.28 E-value=95 Score=19.60 Aligned_cols=27 Identities=26% Similarity=0.657 Sum_probs=18.1
Q ss_pred HHhhhhhcCCCC-CCCChHHHHHHHHHHH
Q 027702 51 VTMRCMLSGDGE-VEPNADQVLQLATEVC 78 (220)
Q Consensus 51 ~~mK~iL~G~~e-~ep~~e~~~qL~~ei~ 78 (220)
..+++++||=|| .+|.+|.+ ++..+|.
T Consensus 4 ~ei~~mMy~fGD~~~P~~ETv-~llEeiV 31 (45)
T 1bh9_A 4 KELRCMMYGFGDDQNPYTESV-DILEDLV 31 (45)
T ss_dssp HHHHHHHHHTTSCSSCCHHHH-HHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcHHHH-HHHHHHH
Confidence 357889999887 56777754 3444543
No 59
>3frt_A Charged multivesicular BODY protein 3; ESCRT, ESCRT-111, CHMP, IST1, coiled coil, cytoplasm, lipoprotein, membrane, myristate, phosphoprotein; 4.00A {Homo sapiens}
Probab=24.12 E-value=2.4e+02 Score=23.52 Aligned_cols=65 Identities=17% Similarity=0.119 Sum_probs=32.0
Q ss_pred CCCCCChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCChHHHHHHHHHHHhh
Q 027702 8 PSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKE 80 (220)
Q Consensus 8 k~~~ktP~elVr~~~e~l~~L~~~~~~~~~~~~k~~eeisK~L~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~ 80 (220)
|..+|||.|.+|.-+-.|.+-... =++...+...+=.|....||...-- -+.+.+.-+|+++++.
T Consensus 2 ~~~~~~p~e~~r~~~r~Lr~~~R~---LdR~~~kle~eEkk~~~~IKkaakk-----g~~~~arilAkelVR~ 66 (218)
T 3frt_A 2 HMQEKPPKELVNEWSLKIRKEMRV---VDRQIRDIQREEEKVKRSVKDAAKK-----GQKDVCIVLAKEMIRS 66 (218)
T ss_dssp ------CHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHH
Confidence 456899999999888777542110 1122233333334444455554331 2346677788887665
No 60
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=20.62 E-value=2.2e+02 Score=26.98 Aligned_cols=153 Identities=11% Similarity=0.099 Sum_probs=0.0
Q ss_pred hhhhcCCCCCCCC-hHHHHHHHHHHHhhc-------HHHHHHhcCCCCCchhhhcHHHHHHHhhhcccCCccchhHHhhc
Q 027702 54 RCMLSGDGEVEPN-ADQVLQLATEVCKED-------VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN 125 (220)
Q Consensus 54 K~iL~G~~e~ep~-~e~~~qL~~ei~~~d-------ll~~Li~~L~~L~FE~RKdv~~If~~llR~~~~~~~p~v~Yl~~ 125 (220)
..++.+=.+.++. -..+++...++.+.+ ++..|+..+..=+...|.-+..+...+.......-.+ +++..
T Consensus 93 ~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~--~~~~~ 170 (852)
T 4fdd_A 93 SECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDS--DVLDR 170 (852)
T ss_dssp HHHHTTTTCSSHHHHHHHHHHHHHHHHHTTTTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHH--CSSSS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhch--hhhcc
Q ss_pred c-HHHHHHHHHhcc--CcchhhhhhHHHHHHhhhHHHHHHHcCchhHHHHhhhhcCCChhhhhhhHHHHHHHHhcChhHH
Q 027702 126 H-FELLDFLVVCYD--NKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVV 202 (220)
Q Consensus 126 ~-peil~~L~~gY~--~~diAl~~G~mLREcik~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~tfkelLtrHk~lv 202 (220)
. +.++..|+.+.. ++++-..+-..|...+++..-.-.-.-++.+..+++.++.++.+|...|+..+-.+...+....
T Consensus 171 ~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~ 250 (852)
T 4fdd_A 171 PLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRL 250 (852)
T ss_dssp CHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHH
Q ss_pred HHHHHh
Q 027702 203 SEYLTA 208 (220)
Q Consensus 203 aefL~~ 208 (220)
..++..
T Consensus 251 ~~~l~~ 256 (852)
T 4fdd_A 251 LPHMHN 256 (852)
T ss_dssp GGGHHH
T ss_pred HHHHHH
Done!