Query 027708
Match_columns 220
No_of_seqs 170 out of 1400
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 23:58:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027708.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027708hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hcj_A THIJ/PFPI domain protei 100.0 5.2E-43 1.8E-47 269.2 15.2 168 8-196 8-175 (177)
2 3efe_A THIJ/PFPI family protei 100.0 8.3E-42 2.8E-46 270.3 13.0 190 8-220 5-208 (212)
3 3er6_A Putative transcriptiona 100.0 8.5E-42 2.9E-46 269.6 12.8 187 1-209 1-200 (209)
4 3ewn_A THIJ/PFPI family protei 100.0 3.3E-41 1.1E-45 272.9 14.3 183 8-212 23-209 (253)
5 3l18_A Intracellular protease 100.0 9.9E-41 3.4E-45 254.9 13.1 166 8-194 2-167 (168)
6 3noq_A THIJ/PFPI family protei 100.0 7.9E-41 2.7E-45 267.7 13.0 181 9-212 6-189 (231)
7 3gra_A Transcriptional regulat 100.0 4.8E-41 1.6E-45 264.0 10.9 179 8-209 5-192 (202)
8 4e08_A DJ-1 beta; flavodoxin-l 100.0 1.1E-40 3.6E-45 259.7 11.1 178 9-207 6-187 (190)
9 3mgk_A Intracellular protease/ 100.0 2.3E-40 7.8E-45 261.8 13.1 189 8-218 4-201 (211)
10 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 7.5E-41 2.6E-45 264.1 9.0 190 8-220 9-205 (208)
11 2vrn_A Protease I, DR1199; cys 100.0 1.1E-39 3.7E-44 253.9 14.9 172 8-200 9-187 (190)
12 4gdh_A DJ-1, uncharacterized p 100.0 6.8E-40 2.3E-44 255.9 11.3 180 9-207 5-193 (194)
13 1oi4_A Hypothetical protein YH 100.0 4.9E-39 1.7E-43 250.9 15.0 167 8-195 23-192 (193)
14 2rk3_A Protein DJ-1; parkinson 100.0 1.5E-39 5.2E-44 254.5 12.0 180 8-207 3-187 (197)
15 3fse_A Two-domain protein cont 100.0 1.2E-38 4.1E-43 268.8 15.7 172 8-199 10-182 (365)
16 3f5d_A Protein YDEA; unknow pr 100.0 6.5E-38 2.2E-42 246.7 12.8 166 8-201 3-174 (206)
17 3uk7_A Class I glutamine amido 100.0 3.2E-37 1.1E-41 265.1 16.9 201 8-209 12-212 (396)
18 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 5.3E-38 1.8E-42 247.2 8.2 182 9-210 3-190 (205)
19 2fex_A Conserved hypothetical 100.0 3E-37 1E-41 239.8 11.4 170 9-200 2-175 (188)
20 3bhn_A THIJ/PFPI domain protei 100.0 2.6E-37 8.9E-42 247.6 10.1 176 8-209 20-201 (236)
21 1u9c_A APC35852; structural ge 100.0 2.4E-36 8.1E-41 240.8 15.4 172 9-197 6-223 (224)
22 3uk7_A Class I glutamine amido 100.0 1.7E-35 5.9E-40 254.3 15.4 190 8-198 205-394 (396)
23 3cne_A Putative protease I; st 100.0 1E-35 3.5E-40 228.6 9.4 159 9-195 3-175 (175)
24 3kkl_A Probable chaperone prot 100.0 4.9E-35 1.7E-39 235.5 13.6 191 8-198 3-239 (244)
25 1rw7_A YDR533CP; alpha-beta sa 100.0 8.7E-35 3E-39 234.5 12.9 184 9-196 4-237 (243)
26 3n7t_A Macrophage binding prot 100.0 2.5E-34 8.7E-39 231.5 13.9 186 8-197 9-244 (247)
27 1n57_A Chaperone HSP31, protei 100.0 2E-34 6.8E-39 237.8 11.4 189 8-199 48-282 (291)
28 1vhq_A Enhancing lycopene bios 100.0 2.7E-33 9.2E-38 224.3 9.7 179 8-198 6-211 (232)
29 3l3b_A ES1 family protein; ssg 100.0 1E-31 3.4E-36 215.8 9.3 167 9-182 24-217 (242)
30 1sy7_A Catalase 1; heme oxidat 99.9 2.2E-24 7.5E-29 194.8 10.4 151 8-196 534-698 (715)
31 3ttv_A Catalase HPII; heme ori 99.8 1E-20 3.5E-25 169.7 10.4 112 8-137 600-711 (753)
32 2iuf_A Catalase; oxidoreductas 99.7 4.3E-17 1.5E-21 145.9 12.1 129 8-195 529-676 (688)
33 3ej6_A Catalase-3; heme, hydro 99.7 4.4E-16 1.5E-20 139.1 11.6 104 8-137 537-649 (688)
34 3d54_D Phosphoribosylformylgly 99.3 6.9E-12 2.4E-16 98.3 6.4 93 9-140 3-101 (213)
35 3l7n_A Putative uncharacterize 98.6 4.6E-07 1.6E-11 71.9 10.8 92 10-134 2-100 (236)
36 3m3p_A Glutamine amido transfe 98.6 2.7E-07 9.1E-12 74.0 9.1 93 9-134 4-98 (250)
37 1q7r_A Predicted amidotransfer 98.6 5.3E-08 1.8E-12 76.5 4.9 86 8-134 23-110 (219)
38 2nv0_A Glutamine amidotransfer 98.5 6.5E-08 2.2E-12 74.6 4.9 85 9-134 2-88 (196)
39 1ka9_H Imidazole glycerol phos 98.5 4E-07 1.4E-11 70.4 7.8 86 9-134 3-91 (200)
40 3ugj_A Phosphoribosylformylgly 98.4 1.3E-06 4.3E-11 84.1 11.5 99 8-140 1047-1159(1303)
41 2iss_D Glutamine amidotransfer 98.4 1.7E-07 5.8E-12 73.0 4.4 86 8-134 20-107 (208)
42 2ywd_A Glutamine amidotransfer 98.4 2.6E-07 8.9E-12 70.8 4.5 85 9-134 3-90 (191)
43 1wl8_A GMP synthase [glutamine 98.3 1.6E-06 5.6E-11 66.3 7.1 86 11-134 3-88 (189)
44 2abw_A PDX2 protein, glutamina 98.3 5E-07 1.7E-11 71.2 3.9 85 9-134 4-96 (227)
45 2ywj_A Glutamine amidotransfer 98.1 6.8E-06 2.3E-10 62.6 6.4 81 10-134 2-84 (186)
46 1gpw_B Amidotransferase HISH; 98.1 7E-06 2.4E-10 63.3 6.4 51 85-135 41-94 (201)
47 1qdl_B Protein (anthranilate s 98.0 5.7E-06 1.9E-10 63.6 5.0 89 11-134 4-93 (195)
48 4gud_A Imidazole glycerol phos 98.0 1.7E-06 5.8E-11 67.3 1.7 86 9-134 3-88 (211)
49 1o1y_A Conserved hypothetical 97.9 2.3E-05 7.8E-10 62.2 7.3 93 11-134 13-109 (239)
50 1a9x_B Carbamoyl phosphate syn 97.9 3.1E-05 1.1E-09 65.5 8.0 87 9-134 191-277 (379)
51 3fij_A LIN1909 protein; 11172J 97.7 5.3E-05 1.8E-09 60.7 6.6 49 86-134 61-124 (254)
52 2vpi_A GMP synthase; guanine m 97.7 8.4E-06 2.9E-10 63.9 1.5 87 9-134 25-112 (218)
53 2a9v_A GMP synthase; structura 97.6 0.00014 4.7E-09 56.6 7.3 87 8-134 13-101 (212)
54 1jvn_A Glutamine, bifunctional 97.5 9.5E-05 3.3E-09 65.7 5.2 88 9-134 5-95 (555)
55 3tqi_A GMP synthase [glutamine 97.4 0.00019 6.6E-09 63.4 6.3 89 8-134 10-98 (527)
56 3l4e_A Uncharacterized peptida 97.4 4.7E-05 1.6E-09 59.1 2.1 48 86-133 79-128 (206)
57 1l9x_A Gamma-glutamyl hydrolas 97.4 0.00029 1E-08 58.1 6.7 96 9-134 31-140 (315)
58 2v4u_A CTP synthase 2; pyrimid 97.4 0.00015 5.1E-09 59.1 4.8 45 86-133 90-134 (289)
59 1fy2_A Aspartyl dipeptidase; s 97.3 5E-05 1.7E-09 59.9 1.4 49 86-134 79-129 (229)
60 3r75_A Anthranilate/para-amino 97.1 0.0029 9.8E-08 57.1 10.2 89 8-134 446-537 (645)
61 2h2w_A Homoserine O-succinyltr 97.0 0.0031 1.1E-07 51.8 9.1 56 78-133 103-162 (312)
62 2w7t_A CTP synthetase, putativ 97.0 0.00062 2.1E-08 55.0 4.6 45 86-133 67-111 (273)
63 3uow_A GMP synthetase; structu 97.0 0.0025 8.6E-08 56.6 8.8 91 9-134 8-99 (556)
64 1gpm_A GMP synthetase, XMP ami 96.7 0.00098 3.4E-08 58.8 4.0 89 8-134 7-95 (525)
65 2vdj_A Homoserine O-succinyltr 96.7 0.0025 8.4E-08 52.2 5.8 50 83-132 96-149 (301)
66 3nva_A CTP synthase; rossman f 96.4 0.0038 1.3E-07 54.6 5.6 48 84-134 348-395 (535)
67 1i1q_B Anthranilate synthase c 96.2 0.01 3.5E-07 45.0 6.5 45 87-134 48-92 (192)
68 1s1m_A CTP synthase; CTP synth 96.1 0.0084 2.9E-07 52.9 6.1 46 85-133 342-387 (545)
69 1vco_A CTP synthetase; tetrame 96.1 0.0058 2E-07 53.9 5.0 47 85-134 354-400 (550)
70 2ywb_A GMP synthase [glutamine 95.3 0.016 5.6E-07 50.7 4.8 46 86-134 42-87 (503)
71 2vxo_A GMP synthase [glutamine 95.2 0.0056 1.9E-07 55.7 1.5 89 8-134 29-117 (697)
72 3en0_A Cyanophycinase; serine 93.9 0.026 9E-07 45.8 2.5 48 86-133 110-160 (291)
73 3rht_A (gatase1)-like protein; 89.6 1.3 4.4E-05 35.1 7.6 84 8-126 4-87 (259)
74 2zuv_A Lacto-N-biose phosphory 79.3 8.1 0.00028 34.9 8.3 88 8-127 438-545 (759)
75 1u0t_A Inorganic polyphosphate 75.1 9 0.00031 30.9 7.1 103 9-128 5-109 (307)
76 4e5v_A Putative THUA-like prot 74.8 30 0.001 27.5 12.2 42 84-129 56-97 (281)
77 2a5l_A Trp repressor binding p 70.4 7.2 0.00025 28.7 5.2 103 9-127 6-117 (200)
78 3bio_A Oxidoreductase, GFO/IDH 68.8 29 0.001 27.7 8.8 30 85-122 64-93 (304)
79 2qv7_A Diacylglycerol kinase D 67.7 9.5 0.00032 31.0 5.7 37 8-44 24-64 (337)
80 2r47_A Uncharacterized protein 67.6 2.4 8.3E-05 30.7 1.8 50 85-135 83-133 (157)
81 3tty_A Beta-GAL, beta-galactos 67.0 20 0.00069 32.3 8.1 61 23-125 426-486 (675)
82 1z0s_A Probable inorganic poly 64.4 14 0.00048 29.5 5.9 31 8-41 29-59 (278)
83 1t0b_A THUA-like protein; treh 60.8 23 0.00078 27.7 6.5 42 85-128 66-107 (252)
84 1jg7_A BGT, DNA beta-glucosylt 59.1 12 0.0004 29.1 4.2 59 10-95 2-67 (351)
85 3f6r_A Flavodoxin; FMN binding 58.1 32 0.0011 23.7 6.4 84 9-127 2-94 (148)
86 2ark_A Flavodoxin; FMN, struct 57.4 15 0.00051 26.9 4.7 83 9-126 5-96 (188)
87 3hly_A Flavodoxin-like domain; 57.2 8.5 0.00029 27.6 3.2 38 86-127 51-91 (161)
88 3s40_A Diacylglycerol kinase; 55.2 14 0.00047 29.6 4.5 41 1-43 3-47 (304)
89 3l49_A ABC sugar (ribose) tran 52.6 18 0.0006 27.9 4.7 37 8-44 5-44 (291)
90 3fni_A Putative diflavin flavo 52.0 24 0.00082 25.2 4.9 90 9-127 5-96 (159)
91 2an1_A Putative kinase; struct 52.0 13 0.00045 29.4 3.8 90 9-128 6-97 (292)
92 2zki_A 199AA long hypothetical 51.6 15 0.0005 27.0 3.8 41 85-127 69-116 (199)
93 2bon_A Lipid kinase; DAG kinas 48.9 13 0.00043 30.2 3.3 35 9-43 30-65 (332)
94 1ydg_A Trp repressor binding p 47.3 20 0.00069 26.5 4.1 37 8-44 6-44 (211)
95 2i0f_A 6,7-dimethyl-8-ribityll 44.7 28 0.00095 25.2 4.2 93 9-123 13-115 (157)
96 3b6i_A Flavoprotein WRBA; flav 43.1 30 0.001 25.2 4.4 102 9-128 2-115 (198)
97 3m9w_A D-xylose-binding peripl 42.8 23 0.00078 27.8 3.9 37 8-44 2-41 (313)
98 1f4p_A Flavodoxin; electron tr 40.5 31 0.0011 23.8 3.9 42 85-128 46-94 (147)
99 2gk3_A Putative cytoplasmic pr 40.1 17 0.00057 28.4 2.6 76 22-125 40-125 (256)
100 1kwg_A Beta-galactosidase; TIM 39.9 56 0.0019 29.1 6.3 62 23-128 426-487 (645)
101 3jx9_A Putative phosphoheptose 38.9 44 0.0015 24.4 4.6 39 83-126 74-112 (170)
102 3dmn_A Putative DNA helicase; 38.4 64 0.0022 23.2 5.5 63 9-96 62-124 (174)
103 4ici_A Putative flavoprotein; 36.9 29 0.00099 25.1 3.4 42 84-127 85-126 (171)
104 3kuu_A Phosphoribosylaminoimid 36.8 46 0.0016 24.5 4.3 42 1-45 8-51 (174)
105 3i9v_6 NADH-quinone oxidoreduc 36.5 28 0.00097 25.8 3.2 41 84-128 72-112 (181)
106 1tk9_A Phosphoheptose isomeras 36.5 58 0.002 23.3 5.1 37 86-127 110-146 (188)
107 3uug_A Multiple sugar-binding 35.6 22 0.00076 28.0 2.8 87 8-126 3-92 (330)
108 1x92_A APC5045, phosphoheptose 35.2 64 0.0022 23.5 5.1 38 85-127 112-149 (199)
109 2xbl_A Phosphoheptose isomeras 35.2 64 0.0022 23.3 5.1 36 86-126 116-151 (198)
110 3klb_A Putative flavoprotein; 35.1 28 0.00096 24.8 3.0 41 84-126 76-116 (162)
111 2yva_A DNAA initiator-associat 34.1 68 0.0023 23.2 5.1 38 85-127 108-145 (196)
112 2b99_A Riboflavin synthase; lu 33.6 24 0.00083 25.5 2.4 90 9-123 3-97 (156)
113 1tlt_A Putative oxidoreductase 33.4 66 0.0023 25.4 5.3 30 85-122 64-93 (319)
114 1hqk_A 6,7-dimethyl-8-ribityll 33.4 46 0.0016 23.9 3.8 91 8-123 12-113 (154)
115 3c24_A Putative oxidoreductase 33.3 38 0.0013 26.4 3.8 113 9-148 12-125 (286)
116 1f0k_A MURG, UDP-N-acetylgluco 32.8 46 0.0016 26.4 4.3 36 9-45 7-44 (364)
117 3nq4_A 6,7-dimethyl-8-ribityll 32.4 40 0.0014 24.3 3.4 90 8-122 12-113 (156)
118 2fn9_A Ribose ABC transporter, 32.2 25 0.00084 27.1 2.4 35 9-43 3-40 (290)
119 1ydm_A Hypothetical protein YQ 31.9 1E+02 0.0035 22.5 5.8 82 8-94 41-123 (187)
120 3re1_A Uroporphyrinogen-III sy 31.8 37 0.0013 26.4 3.4 97 8-136 14-113 (269)
121 1m3s_A Hypothetical protein YC 31.6 82 0.0028 22.5 5.2 38 85-127 78-115 (186)
122 2hna_A Protein MIOC, flavodoxi 31.2 1.3E+02 0.0043 20.6 8.8 72 85-163 45-120 (147)
123 3qjg_A Epidermin biosynthesis 31.1 69 0.0024 23.4 4.6 37 8-44 5-41 (175)
124 2obn_A Hypothetical protein; s 31.0 1.2E+02 0.0041 24.8 6.5 105 8-127 7-112 (349)
125 1rvv_A Riboflavin synthase; tr 30.9 46 0.0016 24.0 3.4 91 8-123 12-113 (154)
126 3i83_A 2-dehydropantoate 2-red 30.8 44 0.0015 26.6 3.8 39 85-128 70-108 (320)
127 2c92_A 6,7-dimethyl-8-ribityll 30.8 44 0.0015 24.2 3.3 89 8-123 17-114 (160)
128 3trj_A Phosphoheptose isomeras 30.7 91 0.0031 23.0 5.3 38 85-127 113-150 (201)
129 3cvj_A Putative phosphoheptose 30.6 66 0.0023 24.4 4.7 39 85-128 107-145 (243)
130 3gbv_A Putative LACI-family tr 30.6 32 0.0011 26.5 2.9 35 8-42 8-47 (304)
131 2i2w_A Phosphoheptose isomeras 30.6 67 0.0023 23.8 4.6 37 86-127 131-167 (212)
132 3lua_A Response regulator rece 30.3 94 0.0032 20.4 5.1 31 9-42 5-36 (140)
133 1vim_A Hypothetical protein AF 30.1 73 0.0025 23.4 4.7 37 85-126 88-124 (200)
134 1di0_A Lumazine synthase; tran 29.6 40 0.0014 24.4 3.0 91 8-123 10-111 (158)
135 3l6u_A ABC-type sugar transpor 29.3 27 0.00093 26.8 2.3 37 8-44 8-47 (293)
136 1y80_A Predicted cobalamin bin 29.2 73 0.0025 23.6 4.6 35 9-43 89-124 (210)
137 2xhz_A KDSD, YRBH, arabinose 5 29.1 85 0.0029 22.3 4.9 37 85-126 95-131 (183)
138 3tb6_A Arabinose metabolism tr 29.0 63 0.0021 24.7 4.4 37 8-44 15-54 (298)
139 3eag_A UDP-N-acetylmuramate:L- 28.7 2.2E+02 0.0075 22.6 7.7 33 8-43 4-36 (326)
140 3zqu_A Probable aromatic acid 28.7 1.2E+02 0.004 22.9 5.6 35 9-43 5-39 (209)
141 3eod_A Protein HNR; response r 28.5 1.2E+02 0.0041 19.5 6.2 31 8-41 7-37 (130)
142 5nul_A Flavodoxin; electron tr 28.4 62 0.0021 21.9 3.8 69 85-163 44-114 (138)
143 2xgg_A Microneme protein 2; A/ 28.2 83 0.0028 22.3 4.7 38 8-45 122-161 (178)
144 3h75_A Periplasmic sugar-bindi 28.2 64 0.0022 25.6 4.4 87 8-127 3-95 (350)
145 1ccw_A Protein (glutamate muta 28.0 37 0.0013 23.6 2.5 35 9-43 4-39 (137)
146 3g1w_A Sugar ABC transporter; 27.9 26 0.0009 27.2 1.9 34 8-41 4-40 (305)
147 3kto_A Response regulator rece 27.8 80 0.0027 20.8 4.3 31 9-42 7-37 (136)
148 2wmy_A WZB, putative acid phos 27.8 98 0.0034 21.7 4.8 36 9-44 9-44 (150)
149 2i2x_B MTAC, methyltransferase 27.7 62 0.0021 25.1 4.1 36 8-43 123-159 (258)
150 3lqk_A Dipicolinate synthase s 27.7 1.1E+02 0.0039 22.8 5.3 38 8-45 7-45 (201)
151 3jy6_A Transcriptional regulat 27.6 64 0.0022 24.5 4.2 37 8-44 7-46 (276)
152 3hn2_A 2-dehydropantoate 2-red 27.4 46 0.0016 26.4 3.3 39 85-128 68-106 (312)
153 2iyf_A OLED, oleandomycin glyc 27.3 51 0.0017 27.1 3.7 37 8-44 7-44 (430)
154 4ggj_A Mitochondrial cardiolip 27.2 1.8E+02 0.0063 21.2 7.8 67 102-180 69-140 (196)
155 1l1s_A Hypothetical protein MT 26.9 78 0.0027 20.8 4.0 56 86-142 34-92 (113)
156 1p3y_1 MRSD protein; flavoprot 26.8 73 0.0025 23.7 4.1 36 8-43 8-43 (194)
157 1sqs_A Conserved hypothetical 26.5 60 0.002 24.6 3.7 40 85-127 78-125 (242)
158 2q62_A ARSH; alpha/beta, flavo 26.5 68 0.0023 24.8 4.1 37 8-44 34-74 (247)
159 3bbl_A Regulatory protein of L 26.4 1.4E+02 0.0047 22.7 5.9 36 8-43 4-46 (287)
160 1jeo_A MJ1247, hypothetical pr 26.3 83 0.0028 22.4 4.3 37 85-126 81-117 (180)
161 3d3j_A Enhancer of mRNA-decapp 25.8 2.5E+02 0.0087 22.3 10.6 110 9-128 133-244 (306)
162 3sho_A Transcriptional regulat 25.5 1.1E+02 0.0037 21.8 4.9 36 86-126 87-122 (187)
163 3ff4_A Uncharacterized protein 24.8 1.6E+02 0.0056 19.8 8.1 81 8-120 4-84 (122)
164 2iuy_A Avigt4, glycosyltransfe 24.3 82 0.0028 24.7 4.3 38 9-46 4-58 (342)
165 1tzb_A Glucose-6-phosphate iso 24.3 1E+02 0.0035 24.3 4.8 44 85-134 78-121 (302)
166 3s2y_A Chromate reductase; ura 30.0 16 0.00055 27.3 0.0 43 85-127 72-118 (199)
167 3p9y_A CG14216, LD40846P; phos 24.2 2.2E+02 0.0077 21.2 6.2 35 8-44 9-43 (198)
168 2yxb_A Coenzyme B12-dependent 24.1 39 0.0013 24.2 2.1 35 9-43 19-54 (161)
169 1c2y_A Protein (lumazine synth 24.0 42 0.0015 24.2 2.2 91 8-123 13-113 (156)
170 3ty2_A 5'-nucleotidase SURE; s 23.8 1.3E+02 0.0045 23.6 5.2 37 8-45 11-47 (261)
171 3mcu_A Dipicolinate synthase, 23.7 1.4E+02 0.0048 22.4 5.2 37 8-44 5-42 (207)
172 2dri_A D-ribose-binding protei 23.6 64 0.0022 24.4 3.5 35 9-43 2-39 (271)
173 3edo_A Flavoprotein, putative 23.5 50 0.0017 23.0 2.6 40 84-125 74-113 (151)
174 2fz5_A Flavodoxin; alpha/beta 23.3 1.1E+02 0.0039 20.2 4.4 40 85-126 45-88 (137)
175 3ius_A Uncharacterized conserv 22.9 1.4E+02 0.0047 22.7 5.3 32 9-44 6-37 (286)
176 4hv4_A UDP-N-acetylmuramate--L 22.9 2.8E+02 0.0096 23.5 7.7 32 8-42 22-53 (494)
177 2p2s_A Putative oxidoreductase 22.5 2.8E+02 0.0097 21.8 8.0 30 85-122 65-94 (336)
178 1qzu_A Hypothetical protein MD 22.3 86 0.0029 23.6 3.8 37 8-44 19-56 (206)
179 4hqf_A Thrombospondin-related 22.2 1.2E+02 0.004 23.5 4.7 37 8-44 128-166 (281)
180 3k1t_A Glutamate--cysteine lig 21.9 1E+02 0.0034 26.0 4.3 37 9-45 96-136 (432)
181 2phj_A 5'-nucleotidase SURE; S 21.6 1.5E+02 0.0052 23.0 5.2 36 9-45 2-37 (251)
182 3g85_A Transcriptional regulat 21.4 2.4E+02 0.0082 21.2 6.5 35 8-42 11-49 (289)
183 2ane_A ATP-dependent protease 21.3 53 0.0018 22.4 2.3 37 88-125 25-61 (125)
184 3qk7_A Transcriptional regulat 21.2 95 0.0032 23.8 4.0 37 8-44 6-49 (294)
185 3dnf_A ISPH, LYTB, 4-hydroxy-3 21.1 1.1E+02 0.0037 24.6 4.3 31 8-38 156-186 (297)
186 3kbq_A Protein TA0487; structu 21.0 72 0.0025 23.3 3.0 83 9-116 4-107 (172)
187 3gv0_A Transcriptional regulat 20.9 80 0.0027 24.1 3.5 37 8-44 8-49 (288)
188 3k4h_A Putative transcriptiona 20.9 98 0.0034 23.5 4.1 36 8-43 8-51 (292)
189 2pd2_A Hypothetical protein ST 20.8 1.3E+02 0.0043 19.4 4.1 57 86-143 29-88 (108)
190 3etn_A Putative phosphosugar i 20.7 1.6E+02 0.0056 21.8 5.2 36 86-126 106-143 (220)
191 3tx1_A UDP-N-acetylenolpyruvoy 20.6 1.3E+02 0.0044 24.2 4.8 82 86-193 54-135 (322)
192 3hcw_A Maltose operon transcri 20.5 86 0.0029 24.1 3.6 36 8-43 7-50 (295)
193 2ejb_A Probable aromatic acid 20.5 1.8E+02 0.0062 21.3 5.2 35 9-43 2-36 (189)
194 1g63_A Epidermin modifying enz 20.5 1.2E+02 0.0042 22.1 4.2 36 9-44 3-38 (181)
195 3soz_A ORF 245 protein, cytopl 20.3 80 0.0027 24.5 3.3 75 23-125 34-118 (248)
196 1wui_S Periplasmic [NIFE] hydr 20.3 62 0.0021 25.5 2.7 43 85-128 68-115 (267)
197 4e12_A Diketoreductase; oxidor 20.1 53 0.0018 25.6 2.3 36 1-44 1-36 (283)
No 1
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=100.00 E-value=5.2e-43 Score=269.18 Aligned_cols=168 Identities=20% Similarity=0.260 Sum_probs=159.1
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+++|.|++.+||++.|+..|+++|+++|++|+++|++++ +++++.|..+.+|..++++++.+|
T Consensus 8 ~~~v~il~~~gFe~~E~~~p~~~l~~ag~~V~~~s~~~~-----------------~v~~~~G~~v~~d~~l~~v~~~~y 70 (177)
T 4hcj_A 8 NNILYVMSGQNFQDEEYFESKKIFESAGYKTKVSSTFIG-----------------TAQGKLGGMTNIDLLFSEVDAVEF 70 (177)
T ss_dssp CEEEEECCSEEECHHHHHHHHHHHHHTTCEEEEEESSSE-----------------EEEETTSCEEEECEEGGGCCGGGC
T ss_pred CCEEEEECCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-----------------eEeeCCCCEEecCccHHHCCHhHC
Confidence 366888889999999999999999999999999999876 899999999999999999988899
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCCce
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAA 167 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~ 167 (220)
|+|+||||+++..+..++.+.+||+++++++|+|++||+|+++|+++|||+||++|+||..++.+++.|+.|++++
T Consensus 71 D~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~---- 146 (177)
T 4hcj_A 71 DAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMANAKILEEINVTCLSADESHVRHGNANIMSEN---- 146 (177)
T ss_dssp SEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSS----
T ss_pred CEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCC----
Confidence 9999999998877889999999999999999999999999999999999999999999999999999999998876
Q ss_pred EEEcCCEEeCCCCCCHHHHHHHHHHHHcc
Q 027708 168 CVVDGNIITGATYEGHPEFIRLFLKALGG 196 (220)
Q Consensus 168 ~v~dg~iiTs~g~~s~~~~~~~li~~l~~ 196 (220)
+|+|||+|||+|+.++.+|++++|+.|.+
T Consensus 147 vV~Dg~liTs~g~~~~~~~a~~lve~L~s 175 (177)
T 4hcj_A 147 VVVSGNIVTANGPTSSKDFANAVVGVLNS 175 (177)
T ss_dssp EEEETTEEEECSGGGHHHHHHHHHHHHHT
T ss_pred EEEECCEEECCCHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999865
No 2
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=8.3e-42 Score=270.30 Aligned_cols=190 Identities=18% Similarity=0.190 Sum_probs=167.4
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHH--------hCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALL--------AFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATF 79 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~--------~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l 79 (220)
++||+|+++|||+..|+..|.++|+ .+++++.++|++++ ++.+++|+.+.+|..+
T Consensus 5 m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~-----------------~v~~~~G~~i~~d~~~ 67 (212)
T 3efe_A 5 TKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKE-----------------MITTMGGLRIKPDISL 67 (212)
T ss_dssp CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSC-----------------CEECTTCCEECCSEEG
T ss_pred ccEEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCC-----------------eEEcCCCCEEecCcCH
Confidence 4799999999999999999999999 66788999988765 7899999999999999
Q ss_pred CCCCCCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCC-CCHHHHHH-CCC
Q 027708 80 DEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYP-PVKPVLIA-AGA 157 (220)
Q Consensus 80 ~~~~~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~-~~~~~l~~-~g~ 157 (220)
+++++.+||+||||||.+.. +..++.+++||+++++++++|++||+|+++|+++|||+||++|+|| ...+.+++ +|.
T Consensus 68 ~~~~~~~~D~livpGG~~~~-~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~ 146 (212)
T 3efe_A 68 DECTLESKDLLILPGGTTWS-EEIHQPILERIGQALKIGTIVAAICGATDALANMGYLDTRKHTSNNLEYTKMVCPNYKG 146 (212)
T ss_dssp GGCCCCTTCEEEECCCSCTT-SGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHHTTTTSSSCBCCSCHHHHHHHCTTCCC
T ss_pred HHCCccCCCEEEECCCCccc-cccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHHcCCCCCCeeecCCHHHHHHHHhhCCC
Confidence 99877799999999998754 4678999999999999999999999999999999999999999997 67777755 543
Q ss_pred --eEecCCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccccccc--ccceeeecCCchhhhcccC
Q 027708 158 --SWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTITGS--DKRILFLCGVSFCFQNLLE 220 (220)
Q Consensus 158 --~~~~~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~a~~--~~~~~~~~~~~~~~~~~~~ 220 (220)
.+.+. .+|+|||+|||+|+. ++||++++|++++++.+.+ .+..++..+++.+|++||+
T Consensus 147 ~~~~~~~----~~V~Dg~iiTs~G~~-~~d~al~li~~l~g~~a~~va~~~~~~~~g~~~~~~~~~~ 208 (212)
T 3efe_A 147 EKFYELG----PAVSDANLVTASGIA-PLEFAMEVLKKIDVFTLDALHSWYNLNKTHKPEYFFQLMN 208 (212)
T ss_dssp TTTBCCC----SEEEETTEEEECTTC-HHHHHHHHHHHHTCSCHHHHHHHHHHHHHCCTHHHHHHHT
T ss_pred ccccCCC----cEEEECCEEECCCch-HHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 24443 499999999999985 9999999999999986655 6677778899999999986
No 3
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=8.5e-42 Score=269.63 Aligned_cols=187 Identities=13% Similarity=0.140 Sum_probs=157.7
Q ss_pred CCCCCCCCCeEEEEecCCCCchhhHHHHHHHHhCC-------CeEEEEcCCCCCCCCCCcccccCCCcccccccccCccc
Q 027708 1 MANSKGGKRSVLLLCGDYMEDYEAMVPFQALLAFG-------VSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNF 73 (220)
Q Consensus 1 ~~~~~~~~~kI~il~~~g~~~~e~~~~~~~l~~ag-------~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i 73 (220)
|+.|++.++||+|+++|||+..|+..|.++|+.+| +++.++|++++ ++.+++|+.+
T Consensus 1 m~~~~~~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~-----------------~v~~~~G~~v 63 (209)
T 3er6_A 1 MSLTNKKNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNR-----------------PLIGRGGISV 63 (209)
T ss_dssp ------CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSS-----------------CEEETTTEEE
T ss_pred CCCCCCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCC-----------------ceecCCCeEE
Confidence 67777778999999999999999999999999875 88999988764 8999999999
Q ss_pred ccCcCcCCCCCCCccEEEEcCCCCccc--ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHH
Q 027708 74 ALNATFDEIDPTKYDGLVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPV 151 (220)
Q Consensus 74 ~~~~~l~~~~~~~~D~liipGG~~~~~--~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~ 151 (220)
.+|..++++ ++||+||||||.++.. +..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.
T Consensus 64 ~~d~~~~~~--~~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~ 141 (209)
T 3er6_A 64 QPTAQWQSF--DFTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKAGLLQQNKAVMHSYFAHL 141 (209)
T ss_dssp ECSSCGGGC--SCCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHTCCSSCEECCCHHHHHH
T ss_pred eCCcCcccc--CCCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHcCCCCCCeeEECHHHHHH
Confidence 999999986 4899999999987643 357999999999999999999999999999999999999999999999999
Q ss_pred HHH-CCCe-EecCCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccc-cccc-ccceeeec
Q 027708 152 LIA-AGAS-WIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGT-ITGS-DKRILFLC 209 (220)
Q Consensus 152 l~~-~g~~-~~~~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~-~a~~-~~~~~~~~ 209 (220)
+++ +|.. +.... .+|+|||+|||+|+++++||++++|+++.|+ .+.+ ++.+++..
T Consensus 142 l~~~~p~~~~~~~~---~~v~Dg~iiTs~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~ 200 (209)
T 3er6_A 142 FGELFPEIMLMTEQ---KALIDGNVYLSSGPYSHSSVMLEIVEEYFGKHTRNLGNQFLSTIE 200 (209)
T ss_dssp HHHHCTTSEECTTC---SEEEETTEEEECCSSCCHHHHHHHHHHHHCHHHHHHHHHHTTC--
T ss_pred HHHHCCCcEEecCC---EEEEeCCEEECCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhccCc
Confidence 976 6654 44443 4999999999999999999999999987777 4555 55555544
No 4
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=3.3e-41 Score=272.86 Aligned_cols=183 Identities=22% Similarity=0.234 Sum_probs=163.4
Q ss_pred CCeEEEEecCCCCchhhHHHHHHH-HhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQAL-LAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l-~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
++||+|+++|||+..|+..|+++| +.+++++.++|++++ +|.+++|+.+.++..+++++ ..
T Consensus 23 ~~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~-----------------~V~~~~G~~i~~d~~l~~~~-~~ 84 (253)
T 3ewn_A 23 DEQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLD-----------------PVTSDAGLAIVPTATFGTCP-RD 84 (253)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSS-----------------CEECTTSCEECCSEETTTSC-SS
T ss_pred CeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCC-----------------eEEcCCCCEEeCCcCHHHcC-CC
Confidence 379999999999999999999999 578999999999875 78999999999999999875 47
Q ss_pred ccEEEEcCCC-CcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCC
Q 027708 87 YDGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETM 165 (220)
Q Consensus 87 ~D~liipGG~-~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~ 165 (220)
||+||||||. ++..+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.++++|.++++..
T Consensus 85 yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~-- 162 (253)
T 3ewn_A 85 LTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILGAAGLLKGYKATSHWSCRDALAGFGAIPTEAR-- 162 (253)
T ss_dssp CSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSS--
T ss_pred CCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCc--
Confidence 8999999998 7666678999999999999999999999999999999999999999999999999988888887543
Q ss_pred ceEEEcCCEEeCCCCCCHHHHHHHHHHHHcccc-ccc-ccceeeecCCc
Q 027708 166 AACVVDGNIITGATYEGHPEFIRLFLKALGGTI-TGS-DKRILFLCGVS 212 (220)
Q Consensus 166 ~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~-a~~-~~~~~~~~~~~ 212 (220)
+|+|||+|||+|+++++||+++||+++.|+. +.+ ++.++|..+.+
T Consensus 163 --vV~Dg~iiTs~G~~a~idlaL~lv~~l~G~~~A~~va~~l~~~~~~p 209 (253)
T 3ewn_A 163 --VVRDRNRITGAGVTAGLDFGLSMVAELRDQTYAECAQLMSEYDPDPP 209 (253)
T ss_dssp --EEEETTEEEECSTTHHHHHHHHHHHHHSCHHHHHHHHHHTTCCCCCS
T ss_pred --EEEECCEEECCCHHHHHHHHHHHHHHHcCHHHHHHHHHhcccCCCCC
Confidence 8999999999999999999999999888874 444 66666655443
No 5
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=9.9e-41 Score=254.93 Aligned_cols=166 Identities=35% Similarity=0.612 Sum_probs=154.5
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+|||+|+++|||+..|+..|+++|+.+|+++.++|++++ ++.++.|+.+.++..++++++.+|
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-----------------~v~~~~g~~i~~~~~~~~~~~~~~ 64 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEGHEVYVASFQRG-----------------KITGKHGYSVNVDLTFEEVDPDEF 64 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSE-----------------EEECTTSCEEEECEEGGGCCGGGC
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEECCCC-----------------EEecCCCcEEeccCChhHCCHhhC
Confidence 579999999999999999999999999999999999775 889999999999999999876789
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCCce
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAA 167 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~ 167 (220)
|+|+||||.++..+..++.+.+||+++++++|+|+++|+|+++|+++|||+||++|+||...+.+++.+..+++. .
T Consensus 65 D~livpGG~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~----~ 140 (168)
T 3l18_A 65 DALVLPGGKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILISAKVLKGRRGTSTITIRDDVINAGAEWIDA----E 140 (168)
T ss_dssp SEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCS----S
T ss_pred CEEEECCCcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHHCCccCCCEEEeCccHHHHHHhCCCEEecC----C
Confidence 999999998766667899999999999999999999999999999999999999999999999999987787654 3
Q ss_pred EEEcCCEEeCCCCCCHHHHHHHHHHHH
Q 027708 168 CVVDGNIITGATYEGHPEFIRLFLKAL 194 (220)
Q Consensus 168 ~v~dg~iiTs~g~~s~~~~~~~li~~l 194 (220)
+++|||+|||+|+.++.+|++++|+++
T Consensus 141 ~v~dg~iiT~~g~~~~~d~~l~li~~l 167 (168)
T 3l18_A 141 VVVDGNWVSSRHPGDLYAWMREFVKLL 167 (168)
T ss_dssp CEEETTEEEECSGGGHHHHHHHHGGGC
T ss_pred EEEeCCEEEcCCHHHHHHHHHHHHHhh
Confidence 899999999999999999999999865
No 6
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=7.9e-41 Score=267.75 Aligned_cols=181 Identities=18% Similarity=0.264 Sum_probs=162.9
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHh-CCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~-ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+||+|+++|||+..|+..|+++|+. .++++.++|++++ +|.+++|+.+.++..+++++ +|
T Consensus 6 ~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~-----------------~V~~~~G~~v~~d~~l~~~~--~~ 66 (231)
T 3noq_A 6 VQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPG-----------------PVVASSGLVLQATTSFADCP--PL 66 (231)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSE-----------------EEECTTSCEEEECEETTTCC--CC
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCC-----------------cEEcCCCCEEecccChhHCC--cC
Confidence 7999999999999999999999998 7999999999765 89999999999999999874 79
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCCce
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAA 167 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~ 167 (220)
|+||||||.++..+..++.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.++++|..+++..
T Consensus 67 D~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~---- 142 (231)
T 3noq_A 67 DVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHER---- 142 (231)
T ss_dssp SEEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSS----
T ss_pred CEEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCc----
Confidence 9999999988766678999999999999999999999999999999999999999999999999988888886543
Q ss_pred EEEcCCEEeCCCCCCHHHHHHHHHHHHcccc-ccc-ccceeeecCCc
Q 027708 168 CVVDGNIITGATYEGHPEFIRLFLKALGGTI-TGS-DKRILFLCGVS 212 (220)
Q Consensus 168 ~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~-a~~-~~~~~~~~~~~ 212 (220)
+|+|||+|||+|+++++||++++|+++.|+. +++ ++.++|..+.+
T Consensus 143 vV~Dg~iiTs~G~~a~~d~aL~li~~~~G~~~A~~va~~l~~~~~~p 189 (231)
T 3noq_A 143 VVRDGNLLTGGGITAGIDFALTLAAELFDAATAQRVQLQLEYAPAPP 189 (231)
T ss_dssp EEEETTEEEECSTTHHHHHHHHHHHHHSCHHHHHHHHHHTTCCCCCS
T ss_pred EEEeCCEEECCCHHHHHHHHHHHHHHHcCHHHHHHHHHhceeCCCCC
Confidence 8999999999999999999999999888774 444 66666655443
No 7
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=4.8e-41 Score=264.01 Aligned_cols=179 Identities=15% Similarity=0.216 Sum_probs=155.8
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCC------CeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFG------VSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDE 81 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag------~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~ 81 (220)
++||+|+++|||+..|+..|+++|+.+| +++.++|++++ ++.+++|+.+.++ ++++
T Consensus 5 ~~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~-----------------~v~~~~G~~i~~d-~l~~ 66 (202)
T 3gra_A 5 PYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGD-----------------RVLSDLGLELVAT-ELSA 66 (202)
T ss_dssp CEEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSS-----------------EEEBTTSCEEECE-ECCS
T ss_pred cEEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC-----------------ceEcCCCCEEECC-Cccc
Confidence 5899999999999999999999999987 89999998765 8999999999999 9998
Q ss_pred CCCCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHH-CCCeEe
Q 027708 82 IDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGASWI 160 (220)
Q Consensus 82 ~~~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~-~g~~~~ 160 (220)
++.++||+||||||.+.... . +.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.+++ +|...+
T Consensus 67 ~~~~~~D~livpGG~~~~~~-~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~ 144 (202)
T 3gra_A 67 AALKELDLLVVCGGLRTPLK-Y-PELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRI 144 (202)
T ss_dssp GGGTTCSEEEEECCTTCCSC-C-TTHHHHHHHHHHHTCEEEEETTHHHHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEE
T ss_pred ccCCCCCEEEEeCCCchhhc-c-HHHHHHHHHHHhhCCEEEEECHHHHHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEe
Confidence 66678999999999876543 4 89999999999999999999999999999999999999999999999977 665544
Q ss_pred cCCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccc-cccc-ccceeeec
Q 027708 161 EPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGT-ITGS-DKRILFLC 209 (220)
Q Consensus 161 ~~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~-~a~~-~~~~~~~~ 209 (220)
.++ .+++|||+|||+|+++++||++++|+++.|+ .+.+ ++.+++..
T Consensus 145 ~~~---~~v~dg~iiTs~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~ 192 (202)
T 3gra_A 145 TPA---SFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEILSFSG 192 (202)
T ss_dssp CSS---SEEEETTEEEESSHHHHHHHHHHHHHHHHCHHHHHHHHHHHC---
T ss_pred cCC---eEEEeCCEEECCCHHHHHHHHHHHHHHHhCHHHHHHHHHHhCcCc
Confidence 444 4999999999999999999999999987776 4555 55555544
No 8
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=1.1e-40 Score=259.72 Aligned_cols=178 Identities=26% Similarity=0.417 Sum_probs=157.2
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCC-CCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGK-KSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~-~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
|||+|+++|||+..|+..|+++|+.+|+++.++|+++ + ++.++.|+.+.++..+++++..+|
T Consensus 6 kkv~ill~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~-----------------~v~~~~g~~i~~d~~l~~~~~~~~ 68 (190)
T 4e08_A 6 KSALVILAPGAEEMEFIIAADVLRRAGIKVTVAGLNGGE-----------------AVKCSRDVQILPDTSLAQVASDKF 68 (190)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSSS-----------------CEECTTSCEEECSEETGGGTTCCC
T ss_pred cEEEEEECCCchHHHHHHHHHHHHHCCCEEEEEECCCCc-----------------ceecCCCcEEECCCCHHHCCcccC
Confidence 7999999999999999999999999999999999976 3 788999999999999999877789
Q ss_pred cEEEEcCCC-CcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCCc
Q 027708 88 DGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMA 166 (220)
Q Consensus 88 D~liipGG~-~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~ 166 (220)
|+||||||. +...+..++.+++||+++++++|+|+++|+|+++|+++|||+||++|+||...+.+++ +..+++..
T Consensus 69 D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~-~~~~~~~~--- 144 (190)
T 4e08_A 69 DVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAKHGVASGKSLTSYPSMKPQLVN-NYSYVDDK--- 144 (190)
T ss_dssp SEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGGGGSSS-SSEECSSC---
T ss_pred CEEEECCCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCeEEeCcCHHHHHhc-CCcccCCC---
Confidence 999999995 4444667999999999999999999999999999999999999999999999888866 34566433
Q ss_pred eEEEcCCEEeCCCCCCHHHHHHHHHHHHcccc-ccc-ccceee
Q 027708 167 ACVVDGNIITGATYEGHPEFIRLFLKALGGTI-TGS-DKRILF 207 (220)
Q Consensus 167 ~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~-a~~-~~~~~~ 207 (220)
.+++|||+|||+|+.+++||++++|+++.|+. +.+ ++.+++
T Consensus 145 ~~v~dg~iiTs~g~~a~~d~al~li~~~~g~~~a~~va~~l~~ 187 (190)
T 4e08_A 145 TVVKDGNLITSRGPGTAYEFALKIAEELAGKEKVQEVAKGLLV 187 (190)
T ss_dssp SEEEETTEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHHHHTC
T ss_pred cEEEECCEEECCChHHHHHHHHHHHHHhcCHHHHHHHHHhhCc
Confidence 49999999999999999999999999887774 444 544443
No 9
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=2.3e-40 Score=261.75 Aligned_cols=189 Identities=16% Similarity=0.244 Sum_probs=164.0
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhC--CCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAF--GVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPT 85 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~a--g~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~ 85 (220)
++||+|+++|||+..|+..|+++|+.+ ++++.++|++++ +|.++.|+.+.+|..+++.+
T Consensus 4 ~~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~-----------------~V~~~~G~~v~~d~~~~~~~-- 64 (211)
T 3mgk_A 4 SYRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGG-----------------LVESSQKVRVETSLYTRDEN-- 64 (211)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCE-----------------EEECTTCCEEEEBCCCCCSS--
T ss_pred ceEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCC-----------------eEecCCCcEEEeccchhhCC--
Confidence 379999999999999999999999998 489999998765 89999999999999998864
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHC-CC-eEecCC
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAA-GA-SWIEPE 163 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~-g~-~~~~~~ 163 (220)
+||+||||||.++..+..++.+++||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++. |. .+....
T Consensus 65 ~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~ 144 (211)
T 3mgk_A 65 IEKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEA 144 (211)
T ss_dssp SEEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSC
T ss_pred CCCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCC
Confidence 6999999999876666789999999999999999999999999999999999999999999999999884 54 555444
Q ss_pred CCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccc-cccc-ccceeeec---CCchhhhcc
Q 027708 164 TMAACVVDGNIITGATYEGHPEFIRLFLKALGGT-ITGS-DKRILFLC---GVSFCFQNL 218 (220)
Q Consensus 164 ~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~-~a~~-~~~~~~~~---~~~~~~~~~ 218 (220)
.+|+|||+|||+|+++++||++++|+++.|+ .+.+ ++.+++.. +.+.+|..+
T Consensus 145 ---~~v~Dg~iiTs~G~~a~~dlal~lv~~~~G~~~A~~va~~l~~~~~r~~~q~~f~~~ 201 (211)
T 3mgk_A 145 ---RWVKDGNIYTSSGVSAGIDMTLGFIEDLIGKEKALEISRSIEYFWNEDSNYDPFSKI 201 (211)
T ss_dssp ---SEEEETTEEEECSHHHHHHHHHHHHHHHHCHHHHHHHHHHHTCCCCCCCSCCGGGTT
T ss_pred ---eEEEeCCEEECCCHHHHHHHHHHHHHHHhCHHHHHHHHHhcEECCcCCCCCchhHHH
Confidence 4999999999999999999999999988777 4455 55555542 456666654
No 10
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=7.5e-41 Score=264.08 Aligned_cols=190 Identities=18% Similarity=0.313 Sum_probs=164.5
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCC-CCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGK-KSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~-~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
++||+|+++|||+..|+..|+++|+.+|+++.++|+++ . ++.+++|+.+.++..++++++.+
T Consensus 9 ~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~g~~-----------------~v~~~~G~~v~~d~~l~~~~~~~ 71 (208)
T 3ot1_A 9 SKRILVPVAHGSEEMETVIIVDTLVRAGFQVTMAAVGDKL-----------------QVQGSRGVWLTAEQTLEACSAEA 71 (208)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESSSCS-----------------EEECTTSCEEECSEEGGGCCGGG
T ss_pred CCeEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCc-----------------ceecCCCcEEeCCCCHHHCCCcC
Confidence 48999999999999999999999999999999999975 3 78899999999999999987779
Q ss_pred ccEEEEcCCC-CcccccCChHHHHHHHHHHhCCCeEEEEehHH-HHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCC
Q 027708 87 YDGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQ-LILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPET 164 (220)
Q Consensus 87 ~D~liipGG~-~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~-~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~ 164 (220)
||+||||||. ++..+..++.+++||+++++++|+|++||+|+ ++|+++|||+||++|+||...+.+. +..|.++.
T Consensus 72 ~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l~--~~~~~~~~- 148 (208)
T 3ot1_A 72 FDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHIP--SERLSRQR- 148 (208)
T ss_dssp CSEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGSC--TTTBCCSS-
T ss_pred CCEEEECCCchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHcc--CCccccCc-
Confidence 9999999997 45556789999999999999999999999999 9999999999999999999887662 24455443
Q ss_pred CceEEE--cCCEEeCCCCCCHHHHHHHHHHHHccc-cccc-ccceeeecCCchhhhcccC
Q 027708 165 MAACVV--DGNIITGATYEGHPEFIRLFLKALGGT-ITGS-DKRILFLCGVSFCFQNLLE 220 (220)
Q Consensus 165 ~~~~v~--dg~iiTs~g~~s~~~~~~~li~~l~~~-~a~~-~~~~~~~~~~~~~~~~~~~ 220 (220)
+++ |||+|||+|+.+++||++++|+++.|+ .+.+ ++.+++..+...+|..+++
T Consensus 149 ---vv~d~dg~iiTs~g~~a~~d~al~lv~~l~G~~~a~~va~~l~~~~~~~~q~~~~l~ 205 (208)
T 3ot1_A 149 ---VCYYATQHLLTSQGPGTALEFALAMIALLAGVELAQHVAAPMVLHPQQLTELSGFID 205 (208)
T ss_dssp ---EEEEGGGTEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHGGGTCCHHHHHHHHTTTT
T ss_pred ---EEEeCCCCEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHhheeCCCCCCccchhhc
Confidence 565 569999999999999999999988777 4455 7777776677777777653
No 11
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=1.1e-39 Score=253.93 Aligned_cols=172 Identities=27% Similarity=0.548 Sum_probs=154.8
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCccccccc-----ccCcccccCcCcCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSE-----TRGHNFALNATFDEI 82 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~-----~~g~~i~~~~~l~~~ 82 (220)
++||+|+++|||+..|+..|+++|+.+|+++.+++++++ ++.+ +.|..+.++..++++
T Consensus 9 ~~~v~il~~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-----------------~v~~~~~~~~~g~~v~~~~~~~~~ 71 (190)
T 2vrn_A 9 GKKIAILAADGVEEIELTSPRAAIEAAGGTTELISLEPG-----------------EIQSMKGDIEPQEKYRVDHVVSEV 71 (190)
T ss_dssp TCEEEEECCTTCBHHHHHHHHHHHHHTTCEEEEEESSSS-----------------EEEEEETTTEEEEEEECSEEGGGC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHCCCEEEEEecCCC-----------------ccccccccccCCcEEeCCCChhhC
Confidence 579999999999999999999999999999999999765 5655 678999999999988
Q ss_pred CCCCccEEEEcCCC-CcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEec
Q 027708 83 DPTKYDGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIE 161 (220)
Q Consensus 83 ~~~~~D~liipGG~-~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~ 161 (220)
++.+||+||||||. ++..+..++.+++||+++++++++|+++|+|+++|+++|||+||++|+||...+.+++.+.++++
T Consensus 72 ~~~~~D~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~ 151 (190)
T 2vrn_A 72 QVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSETGIAQGLKMTSWSSLKRELTLAGAQWVD 151 (190)
T ss_dssp CGGGCSEEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECC
T ss_pred ChhhCCEEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHhCcccCCcEEecCccHHHHHHHcCCeEEC
Confidence 66789999999997 55556789999999999999999999999999999999999999999999999999998888887
Q ss_pred CCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHH-cccccc
Q 027708 162 PETMAACVVDGNIITGATYEGHPEFIRLFLKAL-GGTITG 200 (220)
Q Consensus 162 ~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l-~~~~a~ 200 (220)
++ +++|||+|||+|+.++.+|++++|+++ .|+...
T Consensus 152 ~~----~v~Dg~iiTs~g~~s~~~~~l~li~~l~~g~~~a 187 (190)
T 2vrn_A 152 EE----CVTDKGVVTSRKPDDLPAFNKKIVEEFAEGDHSS 187 (190)
T ss_dssp CS----CEEETTEEECSSGGGHHHHHHHHHHHHHHCCCGG
T ss_pred CC----EEEcCCEEEcCChhhHHHHHHHHHHHHhcccccc
Confidence 76 566999999999999999999999988 666543
No 12
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=6.8e-40 Score=255.87 Aligned_cols=180 Identities=22% Similarity=0.340 Sum_probs=156.2
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCC----
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDP---- 84 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~---- 84 (220)
+||+|+++|||++.|+..|+++|+++|+++++++...... .++.++.|+.+.+|..+++++.
T Consensus 5 ~kV~ill~dGfe~~E~~~p~~vl~~ag~~v~~~s~~~~~~--------------~~v~~~~g~~v~~d~~~~~~~~~d~~ 70 (194)
T 4gdh_A 5 VKVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKD--------------RLVKMSRDVEMYANRSYKEIPSADDF 70 (194)
T ss_dssp CCEEEEEETTCCHHHHHHHHHHHHHTTCCEEEEEESSCTT--------------CEEECTTSCEEECSEEGGGSCCHHHH
T ss_pred CEEEEEECCCcCHHHHHHHHHHHHHCCCeEEEEEEcCCCC--------------ceEecCCCceeeccccHhhCCccccc
Confidence 5999999999999999999999999999999888754321 1688899999999999988753
Q ss_pred -CCccEEEEcCCC-CcccccCChHHHHHHHHHHhC-CCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEec
Q 027708 85 -TKYDGLVIPGGR-APEYLAMNDSVIDLVRKFSNS-GKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIE 161 (220)
Q Consensus 85 -~~~D~liipGG~-~~~~~~~~~~l~~~l~~~~~~-g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~ 161 (220)
.+||+||||||. ++..+..++.+++||++++++ +|+|+++|+|+ +|+++|+|+||++|+||..++.+++.+..|++
T Consensus 71 ~~~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~-~l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d 149 (194)
T 4gdh_A 71 AKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGT-LTAKTSGLPNKQITGHPSVRGQLEEGGYKYLD 149 (194)
T ss_dssp HHHCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGG-HHHHHTTCCCSEECCCGGGHHHHHHTTCEECC
T ss_pred cccCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccc-cchhhceecCCceEecCcHHHHHHhcCCeeec
Confidence 359999999996 466678899999999999875 79999999998 56778889999999999999999999999987
Q ss_pred CCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccccc-cc-ccceee
Q 027708 162 PETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTIT-GS-DKRILF 207 (220)
Q Consensus 162 ~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~a-~~-~~~~~~ 207 (220)
++ +|+|||+|||+|+.+++||++++|+++.|++. .+ ++.+++
T Consensus 150 ~~----vV~Dg~iiTs~g~~~~~d~al~lve~l~G~~~a~~va~~l~~ 193 (194)
T 4gdh_A 150 QP----VVLEENLITSQGPGTAMLFGLKLLEQVASKDKYNAVYKSLSM 193 (194)
T ss_dssp SS----EEEETTEEEECSGGGHHHHHHHHHHHHSCHHHHHHHHHHTTC
T ss_pred ce----EEEcCCEEECCCHhHHHHHHHHHHHHHcCHHHHHHHHhhccC
Confidence 75 89999999999999999999999999988854 44 555544
No 13
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=4.9e-39 Score=250.89 Aligned_cols=167 Identities=33% Similarity=0.584 Sum_probs=154.4
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccc-cccccCc-ccccCcCcCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQT-YSETRGH-NFALNATFDEIDPT 85 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~-v~~~~g~-~i~~~~~l~~~~~~ 85 (220)
++||+|+++|||+..|+..|.++|+.+|+++.+++++++ + +.+++|+ .+.++..+++++..
T Consensus 23 ~~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~-----------------~~v~~~~g~~~v~~~~~l~~~~~~ 85 (193)
T 1oi4_A 23 SKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAG-----------------KTVKGKKGEASVTIDKSIDEVTPA 85 (193)
T ss_dssp CCEEEEECCTTBCTHHHHHHHHHHHHTTCEEEEEESSTT-----------------CEEECTTSSCEEECCEEGGGCCGG
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCC-----------------cceecCCCCeEEECCCChHHCCcc
Confidence 479999999999999999999999999999999998765 5 8888999 99999999988667
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCC
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETM 165 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~ 165 (220)
+||+||||||.++..+..++.+.+||+++++++++|++||+|+++|+++|||+||++|+||...+.+++.+.++++..
T Consensus 86 ~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~-- 163 (193)
T 1oi4_A 86 EFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQE-- 163 (193)
T ss_dssp GCSEEEECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSS--
T ss_pred cCCEEEECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCC--
Confidence 899999999977655667899999999999999999999999999999999999999999999999998888888765
Q ss_pred ceEEEcCC-EEeCCCCCCHHHHHHHHHHHHc
Q 027708 166 AACVVDGN-IITGATYEGHPEFIRLFLKALG 195 (220)
Q Consensus 166 ~~~v~dg~-iiTs~g~~s~~~~~~~li~~l~ 195 (220)
+++||| +|||+|+.++.||++++|+++.
T Consensus 164 --~v~Dg~~iiTs~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 164 --VVVDKDQLVTSRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp --CEEETTTEEEESSGGGHHHHHHHHHHHHC
T ss_pred --EEEECCEEEECCCcchHHHHHHHHHHHhh
Confidence 688999 9999999999999999999875
No 14
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=1.5e-39 Score=254.53 Aligned_cols=180 Identities=23% Similarity=0.357 Sum_probs=156.9
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCC-CCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEI-DPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~-~~~~ 86 (220)
++||+|+++|||+..|+..|+++|+.+|+++.+++++++. ++.++.|+.+.++..++++ ++.+
T Consensus 3 ~~~v~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~----------------~v~~~~g~~v~~d~~l~~~~~~~~ 66 (197)
T 2rk3_A 3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKD----------------PVQCSRDVVICPDASLEDAKKEGP 66 (197)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEETTCSS----------------CEECTTSCEECCSEEHHHHHTTCC
T ss_pred CCEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEEcCCCC----------------ccccCCCCEEeCCcCHHHcCCccC
Confidence 3699999999999999999999999999999999987631 6888999999999999887 6678
Q ss_pred ccEEEEcCCC-CcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHC-CCeEecCCC
Q 027708 87 YDGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAA-GASWIEPET 164 (220)
Q Consensus 87 ~D~liipGG~-~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~-g~~~~~~~~ 164 (220)
||+||||||. ++..+..++.+.+||+++++++|+|++||+|+++|+++|+|+||++|+||...+.+++. +..+.+.
T Consensus 67 ~D~livpGG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~-- 144 (197)
T 2rk3_A 67 YDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSEN-- 144 (197)
T ss_dssp CSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCC--
T ss_pred CCEEEECCCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCC--
Confidence 9999999997 34446679999999999999999999999999999999999999999999999999864 4344433
Q ss_pred CceEEEcCCEEeCCCCCCHHHHHHHHHHHHcccc-ccc-ccceee
Q 027708 165 MAACVVDGNIITGATYEGHPEFIRLFLKALGGTI-TGS-DKRILF 207 (220)
Q Consensus 165 ~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~-a~~-~~~~~~ 207 (220)
.+++|||+|||+|+.+++||++++|+++.|+. +++ ++.+++
T Consensus 145 --~~v~Dg~iiTs~g~~a~~d~al~li~~l~g~~~a~~va~~~~~ 187 (197)
T 2rk3_A 145 --RVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVL 187 (197)
T ss_dssp --SEEEETTEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHGGGTC
T ss_pred --CEEEeCCEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 49999999999999999999999999887774 444 554444
No 15
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=1.2e-38 Score=268.84 Aligned_cols=172 Identities=28% Similarity=0.493 Sum_probs=158.1
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCc-ccccCcCcCCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGH-NFALNATFDEIDPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~i~~~~~l~~~~~~~ 86 (220)
++||+|+++|||+..|+..|+++|+.+|+++.++|+++++ .+.+++|+ .+.++..++++++.+
T Consensus 10 mkkV~ILl~dgf~~~El~~p~dvL~~Ag~~v~vvS~~~g~----------------~V~ss~G~~~i~~d~~l~~v~~~~ 73 (365)
T 3fse_A 10 KKKVAILIEQAVEDTEFIIPCNGLKQAGFEVVVLGSRMNE----------------KYKGKRGRLSTQADGTTTEAIASE 73 (365)
T ss_dssp -CEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESSSSC----------------CEECTTSCCEECCSEETTTCCGGG
T ss_pred ceEEEEEECCCCcHHHHHHHHHHHHHCCCEEEEEECCCCc----------------eeecCCCceEEeCCCCHhhCCCcC
Confidence 5799999999999999999999999999999999998751 38899999 999999999987678
Q ss_pred ccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCCc
Q 027708 87 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMA 166 (220)
Q Consensus 87 ~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~ 166 (220)
||+||||||.++..+..++.+.+||+++++++++|++||+|+++|+++|||+||++|+||...+.+++.++.+.+..
T Consensus 74 ~DaLiVPGG~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~--- 150 (365)
T 3fse_A 74 FDAVVIPGGMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIEGDLLRGKQATGFIAISKDMMNAGADYLDEA--- 150 (365)
T ss_dssp CSEEEECCBTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSS---
T ss_pred CCEEEEECCcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCc---
Confidence 99999999987666678999999999999999999999999999999999999999999999999998778887653
Q ss_pred eEEEcCCEEeCCCCCCHHHHHHHHHHHHccccc
Q 027708 167 ACVVDGNIITGATYEGHPEFIRLFLKALGGTIT 199 (220)
Q Consensus 167 ~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~a 199 (220)
+|+|||+|||+|+.++.+|++++|+.+++...
T Consensus 151 -vV~DGniITs~G~~a~~d~al~lIe~L~g~~~ 182 (365)
T 3fse_A 151 -LVVDGNLITSREPGDLAIFTTAILSRLGYGGK 182 (365)
T ss_dssp -CEEETTEEEECSGGGHHHHHHHHHHHTTCCCS
T ss_pred -EEEECCEEECCCHHHHHHHHHHHHHHhcCchH
Confidence 89999999999999999999999999988744
No 16
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=6.5e-38 Score=246.66 Aligned_cols=166 Identities=21% Similarity=0.226 Sum_probs=145.8
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhC-CCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAF-GVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~a-g~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
++||+|+++|||+..|+..|.++|+.+ ++++.++|+++ .+.+++|+.+.++..++++ +.+
T Consensus 3 m~kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~------------------~V~~~~G~~v~~d~~l~~~-~~~ 63 (206)
T 3f5d_A 3 LKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDP------------------IVSSIGGFKTSVDYIIGLE-PAN 63 (206)
T ss_dssp CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSS------------------EEEBTTSCEEECSEETTSS-CSC
T ss_pred ccEEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCC------------------CEEecCCcEEecCcChhhC-CcC
Confidence 379999999999999999999999998 99999999865 3778899999999999987 468
Q ss_pred ccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHH----C-CCeEec
Q 027708 87 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA----A-GASWIE 161 (220)
Q Consensus 87 ~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~----~-g~~~~~ 161 (220)
||+||||||.++.. .++.+++||+++++++++|++||+|+++|+++|||+||++|+||. +.+++ . ++++.+
T Consensus 64 ~D~livpGG~~~~~--~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGLL~Gr~aTthw~--~~~~~~~~~~~~~~~~~ 139 (206)
T 3f5d_A 64 FNLLVMIGGDSWSN--DNKKLLHFVKTAFQKNIPIAAICGAVDFLAKNGLLNNHSHTGNFV--YLWKDYKQYKPISSFVE 139 (206)
T ss_dssp CSEEEECCBSCCCC--CCHHHHHHHHHHHHTTCCEEEETHHHHHHHHTTTTTTSCBCCSCG--GGGTTCTTCCCSSCBCC
T ss_pred CCEEEEcCCCChhh--cCHHHHHHHHHHHHcCCEEEEECHHHHHHHHcCCCCCCEEEccCH--HHhhhhHhhcCCCeEcc
Confidence 99999999987654 899999999999999999999999999999999999999999993 23332 2 455654
Q ss_pred CCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccccccc
Q 027708 162 PETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTITGS 201 (220)
Q Consensus 162 ~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~a~~ 201 (220)
. .+|+|||+|||+|+. ++||++++|++++.+.+.+
T Consensus 140 ~----~~V~Dg~iiTs~G~a-~id~al~li~~l~~~~a~~ 174 (206)
T 3f5d_A 140 K----QAVRDKNLVTANGTA-PIEFTNLILEMIDFDTPEN 174 (206)
T ss_dssp S----SEEEETTEEEECTTC-HHHHHHHHHHHTTCSCHHH
T ss_pred C----CEEEECCEEECCCch-HHHHHHHHHHHhCcchHHH
Confidence 4 399999999999985 9999999999998777766
No 17
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=100.00 E-value=3.2e-37 Score=265.12 Aligned_cols=201 Identities=75% Similarity=1.285 Sum_probs=170.6
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+|||+|+++|||+..|+..|+++|+++|++++++|+++.+.++.....+...+. ..+.++.|..+.++..++++++.+|
T Consensus 12 ~~kv~ill~dg~e~~E~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~~~ 90 (396)
T 3uk7_A 12 SRTVLILCGDYMEDYEVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGH-QTYFESRGHNFTLNATFDEVDLSKY 90 (396)
T ss_dssp CCEEEEECCTTEEHHHHHHHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSS-SSCEEEECCCEECCSCGGGCCGGGC
T ss_pred CCeEEEEeCCCccHHHHHHHHHHHHHCCCEEEEEcCCCcCCCcccccccccccc-hhhhhccCceeeccCChhhcCcccC
Confidence 479999999999999999999999999999999999865433222222222222 2677888999999999999877899
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCCce
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAA 167 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~ 167 (220)
|+||||||.++..+..++.+.+||+++++++|+|+++|+|+++|+++|||+||++|+||...+.+++.|..|++.+.+..
T Consensus 91 D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~ 170 (396)
T 3uk7_A 91 DGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPDV 170 (396)
T ss_dssp SEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSSTTC
T ss_pred CEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhccccCCCEeecCcchHHHHHHCCCEEECCCCCcc
Confidence 99999999876656789999999999999999999999999999999999999999999999999988899988765456
Q ss_pred EEEcCCEEeCCCCCCHHHHHHHHHHHHcccccccccceeeec
Q 027708 168 CVVDGNIITGATYEGHPEFIRLFLKALGGTITGSDKRILFLC 209 (220)
Q Consensus 168 ~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~a~~~~~~~~~~ 209 (220)
+++|||+|||+|+.++.+|++++|+++.++.......+.++.
T Consensus 171 ~v~Dg~iiT~~g~~~~~d~al~li~~l~g~~~~~~~ki~ill 212 (396)
T 3uk7_A 171 CVVDGSLITAATYEGHPEFIQLFVKALGGKITGANKRILFLC 212 (396)
T ss_dssp EEEETTEEEESSGGGHHHHHHHHHHHTTCEEECCCCEEEEEC
T ss_pred eEecCCEEEecCcccHHHHHHHHHHHHhccchhccceEEEEe
Confidence 999999999999999999999999999998654433333333
No 18
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=5.3e-38 Score=247.24 Aligned_cols=182 Identities=23% Similarity=0.382 Sum_probs=154.8
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
+||+|+++|||+..|+..|+++|+.+|+++.++|++++... ++.+++|+.+.++..++++++.+||
T Consensus 3 ~kV~ill~~g~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~--------------~v~~~~g~~v~~~~~l~~~~~~~~D 68 (205)
T 2ab0_A 3 ASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNL--------------AITCSRGVKLLADAPLVEVADGEYD 68 (205)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEECSSTTCC--------------EEECTTSCEEECSEEHHHHTTSCCS
T ss_pred cEEEEEEcCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCCCc--------------eeecCCCeEEecCCCHHHCCcccCC
Confidence 69999999999999999999999999999999998764100 5788899999999999887667899
Q ss_pred EEEEcCCC-CcccccCChHHHHHHHHHHhCCCeEEEEehHH-HHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCCc
Q 027708 89 GLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQ-LILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMA 166 (220)
Q Consensus 89 ~liipGG~-~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~-~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~ 166 (220)
+||||||. ++..+..++.+.+||+++++++|+|++||+|+ ++|+++|||+||++|+||...+.+.+ ..+.+.
T Consensus 69 ~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~~~--~~~~~~---- 142 (205)
T 2ab0_A 69 VIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPA--EQWLDK---- 142 (205)
T ss_dssp EEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGSCT--TTBCCC----
T ss_pred EEEECCCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHccC--CEEecC----
Confidence 99999997 34556679999999999999999999999999 99999999999999999987654432 345443
Q ss_pred eEEEcCCE--EeCCCCCCHHHHHHHHHHHHcccc-ccc-ccceeeecC
Q 027708 167 ACVVDGNI--ITGATYEGHPEFIRLFLKALGGTI-TGS-DKRILFLCG 210 (220)
Q Consensus 167 ~~v~dg~i--iTs~g~~s~~~~~~~li~~l~~~~-a~~-~~~~~~~~~ 210 (220)
.+++|||+ |||+|+.++.+|++++|+++.|.. +.+ ++.+++...
T Consensus 143 ~vv~Dg~i~viTs~g~~s~~d~al~li~~l~g~~~a~~va~~l~~~~~ 190 (205)
T 2ab0_A 143 RVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAG 190 (205)
T ss_dssp SEEEETTTTEEEECSGGGHHHHHHHHHHHHTCHHHHHHHHTTTTCCTT
T ss_pred CEEEeCCcCeEECcChhhHHHHHHHHHHHhcChHHHHHHHHhcccCCC
Confidence 38899999 999999999999999999988774 455 665666543
No 19
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=100.00 E-value=3e-37 Score=239.78 Aligned_cols=170 Identities=22% Similarity=0.328 Sum_probs=149.1
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHh-CCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~-ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+||+|+++|||++.|+..|.++|+. +++++.++|++++ ++.+++|+.+.++..++++++.+|
T Consensus 2 ~~i~ill~~g~~~~e~~~~~~~l~~a~~~~v~~vs~~~~-----------------~v~~~~g~~v~~~~~~~~~~~~~~ 64 (188)
T 2fex_A 2 TRIAIALAQDFADWEPALLAAAARSYLGVEIVHATPDGM-----------------PVTSMGGLKVTPDTSYDALDPVDI 64 (188)
T ss_dssp CEEEEECCTTBCTTSSHHHHHHHHHHSCCEEEEEETTSS-----------------CEECTTCCEEECSEEGGGCCTTTC
T ss_pred cEEEEEeCCCchHHHHHHHHHHHhhcCCceEEEEeCCCC-----------------ceeeCCCcEEeccccHHHCCcccC
Confidence 6999999999999999999999999 9999999999865 788899999999999998876789
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHH-CCC--eEecCCC
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGA--SWIEPET 164 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~-~g~--~~~~~~~ 164 (220)
|+||||||.+.. ...++.+++||+++++++++|++||+|+++|+++|||+||++|+||.....+++ ++. .+.++.
T Consensus 65 D~livpGG~~~~-~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~- 142 (188)
T 2fex_A 65 DALVIPGGLSWE-KGTAADLGGLVKRFRDRDRLVAGICAAASALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQP- 142 (188)
T ss_dssp SEEEECCBSHHH-HTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCS-
T ss_pred CEEEECCCCccc-ccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCC-
Confidence 999999997643 357899999999999999999999999999999999999999999986655544 443 344443
Q ss_pred CceEEEcCCEEeCCCCCCHHHHHHHHHHHHcccccc
Q 027708 165 MAACVVDGNIITGATYEGHPEFIRLFLKALGGTITG 200 (220)
Q Consensus 165 ~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~a~ 200 (220)
++|+|||+|||+|+. ++||++++|+++.+....
T Consensus 143 --~~v~Dg~iiTs~g~~-~~d~al~lv~~l~~~~~~ 175 (188)
T 2fex_A 143 --RAVSDGGVVTAAGSA-PVSFAVEILKSLGLFGPE 175 (188)
T ss_dssp --SCEEETTEEEECTTC-HHHHHHHHHHHTTCCSHH
T ss_pred --CEEEECCEEECCCcc-HHHHHHHHHHHccCCCHH
Confidence 189999999999985 899999999999877543
No 20
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=100.00 E-value=2.6e-37 Score=247.65 Aligned_cols=176 Identities=19% Similarity=0.235 Sum_probs=153.8
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCC--CeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFG--VSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPT 85 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag--~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~ 85 (220)
++||+|+++|||+..|+..|+++|+.++ +++.+++ +++ ++.++.|+.+.++..+++. .
T Consensus 20 ~~kV~ill~dGf~~~e~~~p~dvl~~~~~~~~v~~vs-~~~-----------------~V~ss~G~~v~~d~~l~~~--~ 79 (236)
T 3bhn_A 20 MYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILG-TKP-----------------EHHSQLGMTVKTDGHVSEV--K 79 (236)
T ss_dssp CEEEEEECCTTBCHHHHHHHHHHHTTCSSSEEEEEEE-SSS-----------------EEEBTTCCEEECSEEGGGG--G
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHHcCCCCEEEEEEE-CCC-----------------cEEecCCcEEecCcccccc--c
Confidence 5799999999999999999999999976 7999999 654 7889999999999988873 5
Q ss_pred CccEEEEcCC-CCcccccCChHHHHHHHHHHhCCC-eEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCC
Q 027708 86 KYDGLVIPGG-RAPEYLAMNDSVIDLVRKFSNSGK-TIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPE 163 (220)
Q Consensus 86 ~~D~liipGG-~~~~~~~~~~~l~~~l~~~~~~g~-~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~ 163 (220)
+||+|||||| .++..+..++.+++|| ++++++ +|++||+|+++|+++|||+||++|+||...+.+++.+..+.+.
T Consensus 80 ~~D~liVPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~- 156 (236)
T 3bhn_A 80 EQDVVLITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGSFVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDL- 156 (236)
T ss_dssp GCSEEEECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSS-
T ss_pred CCCEEEEcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHHHHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCC-
Confidence 8999999999 6665567899999999 667777 9999999999999999999999999999999999976677444
Q ss_pred CCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccccc-cc-ccceeeec
Q 027708 164 TMAACVVDGNIITGATYEGHPEFIRLFLKALGGTIT-GS-DKRILFLC 209 (220)
Q Consensus 164 ~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~a-~~-~~~~~~~~ 209 (220)
.+|+|||+|||+|+++++||++++|+++.|+.. .+ ++.+++..
T Consensus 157 ---~vV~Dg~iiTs~G~~a~~dlal~lIe~l~G~~~A~~va~~l~~~~ 201 (236)
T 3bhn_A 157 ---PLVIEGNIATAGGCLSLLYLVGWLAERLFDSVKRKQIQNQLIPAG 201 (236)
T ss_dssp ---SEEEETTEEEECSGGGHHHHHHHHHHHHSCHHHHHHHHTTTSCTT
T ss_pred ---cEEEeCCEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHhcccCC
Confidence 499999999999999999999999998887744 54 55555543
No 21
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=100.00 E-value=2.4e-36 Score=240.81 Aligned_cols=172 Identities=23% Similarity=0.364 Sum_probs=149.1
Q ss_pred CeEEEEec----------CCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccc--------cC
Q 027708 9 RSVLLLCG----------DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSET--------RG 70 (220)
Q Consensus 9 ~kI~il~~----------~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~--------~g 70 (220)
+||+|+++ +||+..|+..|+++|+.+|+++.++|+++++ +..+ .|
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~~-----------------v~~~~~~~~~~~~~ 68 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGGE-----------------VPLDPRSINEKDPS 68 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCBC-----------------CCBCGGGSSSCCGG
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCCc-----------------cccCccccccHHHH
Confidence 79999999 9999999999999999999999999998752 2221 13
Q ss_pred -----cccccCcCcCCCCCCCccEEEEcCCCCcc-cccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCc------ccC
Q 027708 71 -----HNFALNATFDEIDPTKYDGLVIPGGRAPE-YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD------VVK 138 (220)
Q Consensus 71 -----~~i~~~~~l~~~~~~~~D~liipGG~~~~-~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ag------lL~ 138 (220)
..+.++..+++++..+||+||||||.+.. .+..++.+.+||+++++++|+|++||+|+++|+++| ||+
T Consensus 69 ~~~~~~~i~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La~ag~~~g~~lL~ 148 (224)
T 1u9c_A 69 WAEAEAALKHTARLSKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNATYKDGTPIVK 148 (224)
T ss_dssp GHHHHHHTTSBEECCGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTSCBTTT
T ss_pred HhhhhHhhcCCCChHHcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHHHccccCCCceec
Confidence 56888888988766789999999998764 467899999999999999999999999999999999 999
Q ss_pred CceEecCCCCHH---------------HHHHCCCeEecCCC-CceEEEcCCEEeCCCCCCHHHHHHHHHHHHccc
Q 027708 139 GRKCTAYPPVKP---------------VLIAAGASWIEPET-MAACVVDGNIITGATYEGHPEFIRLFLKALGGT 197 (220)
Q Consensus 139 g~~~T~~~~~~~---------------~l~~~g~~~~~~~~-~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~ 197 (220)
||++|+||..++ .+++.+..+++.+. ...+|+|||+|||+|+.++.+|++++|+++.++
T Consensus 149 Gr~~T~~~~~~~~~~~~~~~~p~~~~~~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~ 223 (224)
T 1u9c_A 149 GKTVTSFTDEEEREVGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEER 223 (224)
T ss_dssp TCEECCSCHHHHHHHTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTT
T ss_pred CcEEecCCCHHHhhccccccCCccHHHHHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhcc
Confidence 999999998655 46667888876641 124999999999999999999999999998775
No 22
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-35 Score=254.30 Aligned_cols=190 Identities=57% Similarity=1.083 Sum_probs=163.3
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
++||+|+++|||++.|+..|+++|+++|+++.++++++++....+..+....+. ..+.++.|..+.++..+++++..+|
T Consensus 205 ~~ki~ill~dg~~~~e~~~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~~~ 283 (396)
T 3uk7_A 205 NKRILFLCGDYMEDYEVKVPFQSLQALGCQVDAVCPEKKAGDRCPTAIHDFEGD-QTYSEKPGHTFALTTNFDDLVSSSY 283 (396)
T ss_dssp CCEEEEECCTTEEHHHHHHHHHHHHHHTCEEEEECTTCCTTCEECEEEEECCSS-SSCEEEECCCEECCSCGGGCCGGGC
T ss_pred cceEEEEecCCCcchhHHHHHHHHHHCCCEEEEECCCCCCCccccccccccccc-chhhhcCCceeeccCCHHHCCcccC
Confidence 479999999999999999999999999999999999876422111222222222 2577889999999999999877899
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCCce
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAA 167 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~ 167 (220)
|+|+||||.++..+..++.+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.++..+..|++.+....
T Consensus 284 D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~ 363 (396)
T 3uk7_A 284 DALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAAAGVLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDR 363 (396)
T ss_dssp SEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSSTTC
T ss_pred CEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHHcCCcCCCEEecCccHHHHHHHCCCEEEcCCCcee
Confidence 99999999876666789999999999999999999999999999999999999999999999999888889988752113
Q ss_pred EEEcCCEEeCCCCCCHHHHHHHHHHHHcccc
Q 027708 168 CVVDGNIITGATYEGHPEFIRLFLKALGGTI 198 (220)
Q Consensus 168 ~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~ 198 (220)
+|+|||+|||+|+.++.||++++|++++++.
T Consensus 364 ~v~Dg~iiTs~g~~~~~d~~l~li~~l~~~~ 394 (396)
T 3uk7_A 364 CFTDGNLVTGAAWPGHPEFVSQLMALLGIQV 394 (396)
T ss_dssp EEEETTEEEESSGGGHHHHHHHHHHHHTCEE
T ss_pred EEEcCCEEECCCchhHHHHHHHHHHHhcccc
Confidence 8999999999999999999999999998864
No 23
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1e-35 Score=228.58 Aligned_cols=159 Identities=19% Similarity=0.341 Sum_probs=140.1
Q ss_pred CeEEEEecC---C---CCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCC
Q 027708 9 RSVLLLCGD---Y---MEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEI 82 (220)
Q Consensus 9 ~kI~il~~~---g---~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~ 82 (220)
+||+|+++| | |+..|+.. ++++++.+++++++. ++.+++|+.+.++..++++
T Consensus 3 ~~v~ill~~~~~g~~~~~~~e~~~------~~~~~v~~vs~~~~~----------------~v~~~~g~~v~~d~~~~~~ 60 (175)
T 3cne_A 3 KKVAVLAVNPVNGCGLFQYLEAFF------ENGISYKVFAVSDTK----------------EIKTNSGMVLIVDDVIANL 60 (175)
T ss_dssp CEEEEEECSSBCHHHHHHHHHHHH------HTTCEEEEEESSSSS----------------EEEBTTSCEEECSEEGGGG
T ss_pred cEEEEEEecCcCCCccchhhheee------eCCCEEEEEECCCCC----------------ceecCCCeEEEeccCHHHh
Confidence 799999999 9 77777666 689999999987421 7889999999999999887
Q ss_pred --CCCCccEEEEcCC--C-Cccccc---CChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHH
Q 027708 83 --DPTKYDGLVIPGG--R-APEYLA---MNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA 154 (220)
Q Consensus 83 --~~~~~D~liipGG--~-~~~~~~---~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~ 154 (220)
++.+||+|||||| . ++..+. .++.+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++
T Consensus 61 ~~~~~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~G~~~T~~~~~~~~l~~ 140 (175)
T 3cne_A 61 KGHEDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFTGITKGKKVAVHPLAKPAIQN 140 (175)
T ss_dssp TTCGGGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTTTTTCEEECCGGGGGGCCS
T ss_pred ccCcccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCEEEeCccHHHHhhc
Confidence 5678999999999 5 665555 6789999999999999999999999999999999999999999998888866
Q ss_pred CCCeEecCCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHc
Q 027708 155 AGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALG 195 (220)
Q Consensus 155 ~g~~~~~~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~ 195 (220)
..+.+. .+++|||+|||+|+.+++||++++|+++.
T Consensus 141 --~~~~~~----~~v~Dg~iiTs~g~~~~~d~al~li~~l~ 175 (175)
T 3cne_A 141 --GIATDE----KSEIDGNFFTAQDENTIWTMLPKVIEALK 175 (175)
T ss_dssp --SEEESS----SEEEETTEEEESSGGGGGGTHHHHHHHHC
T ss_pred --CEEeCC----CEEEeCCEEeCCChHHHHHHHHHHHHHhC
Confidence 667654 39999999999999999999999999873
No 24
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=100.00 E-value=4.9e-35 Score=235.54 Aligned_cols=191 Identities=19% Similarity=0.258 Sum_probs=148.3
Q ss_pred CCeEEEEecC------------CCCchhhHHHHHHHHhCCCeEEEEcCCCCC-CCCCCcccccCCCc-cccc---ccccC
Q 027708 8 KRSVLLLCGD------------YMEDYEAMVPFQALLAFGVSVDAACPGKKS-GDVCPTAVHQSTGH-QQTY---SETRG 70 (220)
Q Consensus 8 ~~kI~il~~~------------g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~-~~~~~~~~~~~~~~-~~~v---~~~~g 70 (220)
|+||+|++.+ ||+..|+..|+++|+++|++|+++|++++. .++..+......+. .+.+ .++.+
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 82 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFN 82 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSSCCCBCTTC--------------------CH
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcCCccccccccCHHHHHHHHHhhHHHH
Confidence 4699999973 788899999999999999999999998653 11111110000000 0011 12345
Q ss_pred cccccCcCcCCCCCCCccEEEEcCCCCc-ccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC-------cccCCceE
Q 027708 71 HNFALNATFDEIDPTKYDGLVIPGGRAP-EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA-------DVVKGRKC 142 (220)
Q Consensus 71 ~~i~~~~~l~~~~~~~~D~liipGG~~~-~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a-------glL~g~~~ 142 (220)
..+.++..++++++.+||+||||||.++ ..+..++.+.+||+++++++|+|++||+|+++|+++ |||+||++
T Consensus 83 ~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a~~~~~g~gll~G~~~ 162 (244)
T 3kkl_A 83 KALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAI 162 (244)
T ss_dssp HHHHTCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCEE
T ss_pred HHhcCCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhhccccCCceeCCcee
Confidence 6788899999998889999999999875 457789999999999999999999999999999999 99999999
Q ss_pred ecCCCCHH-------------------HHHHCCCeEecC--CCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHcccc
Q 027708 143 TAYPPVKP-------------------VLIAAGASWIEP--ETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 198 (220)
Q Consensus 143 T~~~~~~~-------------------~l~~~g~~~~~~--~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~ 198 (220)
|+||..++ .+++.|+.|++. +.+..+|+|||+||++|+.++.+|++++|+.+..-+
T Consensus 163 T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~~ 239 (244)
T 3kkl_A 163 TGFPLEGEIALGVDDILRSRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSVE 239 (244)
T ss_dssp CCSCHHHHHHHTTHHHHHHTTCCCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC--
T ss_pred cCCCcHHHHhhhhhhhccccccccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhhh
Confidence 99998743 345568999874 112259999999999999999999999999987643
No 25
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=100.00 E-value=8.7e-35 Score=234.49 Aligned_cols=184 Identities=21% Similarity=0.288 Sum_probs=146.5
Q ss_pred CeEEEEec------------CCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCc-----cccc----cc
Q 027708 9 RSVLLLCG------------DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGH-----QQTY----SE 67 (220)
Q Consensus 9 ~kI~il~~------------~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~-----~~~v----~~ 67 (220)
+||+|++. +|++..|+..|+++|+.+|++|+++|+++++. +...+.... ...+ .+
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g~~~----~d~~s~~~~~~~~~~~~~~~~~~~ 79 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFG----WDEHSLAKDFLNGQDETDFKNKDS 79 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSSCCC----BCGGGGSTTTSCHHHHHHHHCTTS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCCCCC----cCcccccccccChHHHHHHHhhhH
Confidence 58999997 68888999999999999999999999987521 111111000 0000 11
Q ss_pred ccCcccccCcCcCCCCCCCccEEEEcCCCCc-ccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCc-------ccCC
Q 027708 68 TRGHNFALNATFDEIDPTKYDGLVIPGGRAP-EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD-------VVKG 139 (220)
Q Consensus 68 ~~g~~i~~~~~l~~~~~~~~D~liipGG~~~-~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ag-------lL~g 139 (220)
+.|..+.++..+++++..+||+||||||.++ ..+..++.+.+||+++++++|+|++||+|+++|+++| ||+|
T Consensus 80 ~~g~~l~~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~ag~~~~g~~lL~G 159 (243)
T 1rw7_A 80 DFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEG 159 (243)
T ss_dssp HHHHHHHTCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTT
T ss_pred HHHhhhccCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHHhcCcccCCceeeCC
Confidence 3466788888999887778999999999875 3467899999999999999999999999999999999 9999
Q ss_pred ceEecCCCCHHH-------------------HHHCCCeEecC--CCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHcc
Q 027708 140 RKCTAYPPVKPV-------------------LIAAGASWIEP--ETMAACVVDGNIITGATYEGHPEFIRLFLKALGG 196 (220)
Q Consensus 140 ~~~T~~~~~~~~-------------------l~~~g~~~~~~--~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~ 196 (220)
|++|+||..++. +++.|+.++.. +-+..+|+|||+|||+|+.++++|++++|+++..
T Consensus 160 ~~~T~~~~~~e~~~~~~~~~p~~~~~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 160 KSITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp CEECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred cEEeecCCHHHhhccccccccccccccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 999999986554 55568888742 0022599999999999999999999999997753
No 26
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=100.00 E-value=2.5e-34 Score=231.54 Aligned_cols=186 Identities=23% Similarity=0.331 Sum_probs=148.9
Q ss_pred CCeEEEEecC------------CCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCc-----c-ccccc--
Q 027708 8 KRSVLLLCGD------------YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGH-----Q-QTYSE-- 67 (220)
Q Consensus 8 ~~kI~il~~~------------g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~-----~-~~v~~-- 67 (220)
|+||+|++.+ ||+..|+..|+++|+++|++|+++|++++. .+..++.... . ..+..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g~~----~~d~~s~~~~~~~~~~~~~~~~~~ 84 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETGTF----GWDEHSLTQEYLSKEDEKVLHSEH 84 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSSCC----CBCSGGGSGGGCCHHHHHHHTCSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCCCc----ccCcccccccccCHHHHHHHHhhh
Confidence 3799999986 888999999999999999999999998652 1111111100 0 00111
Q ss_pred -ccCccccc-CcCcCCCCCCCccEEEEcCCCCc-ccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC------cccC
Q 027708 68 -TRGHNFAL-NATFDEIDPTKYDGLVIPGGRAP-EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA------DVVK 138 (220)
Q Consensus 68 -~~g~~i~~-~~~l~~~~~~~~D~liipGG~~~-~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a------glL~ 138 (220)
+.+..+.+ +..+++++..+||+||||||+++ ..+..++.+.+||+++++++|+|++||+|+++|+++ |||+
T Consensus 85 ~~~~~~l~~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~a~~~~g~gll~ 164 (247)
T 3n7t_A 85 NHFMEKMNKQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGIHDENGDSVIK 164 (247)
T ss_dssp CHHHHHHHHCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGCBCTTSSBTTT
T ss_pred HHHHHHHhccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHhhcccCCcccc
Confidence 12334666 88899988889999999999986 457889999999999999999999999999999999 9999
Q ss_pred CceEecCCCCHH-------------------HHHHCCCeEecCC--CCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccc
Q 027708 139 GRKCTAYPPVKP-------------------VLIAAGASWIEPE--TMAACVVDGNIITGATYEGHPEFIRLFLKALGGT 197 (220)
Q Consensus 139 g~~~T~~~~~~~-------------------~l~~~g~~~~~~~--~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~ 197 (220)
||++|+||..++ .+++.|+.|++.. .+..+|+|||+||++|+.++.+|++++|+.|...
T Consensus 165 G~~~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~~ 244 (247)
T 3n7t_A 165 DKTVTGFTTKGEIMIKVIDKMREDHLHTIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEGI 244 (247)
T ss_dssp TCEECCCCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHHH
T ss_pred CceecCCCcHHHhhhhhhhhccccchhhHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhhh
Confidence 999999998753 3555789998741 1235999999999999999999999999988653
No 27
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=100.00 E-value=2e-34 Score=237.77 Aligned_cols=189 Identities=16% Similarity=0.221 Sum_probs=151.3
Q ss_pred CCeEEEEecC--------------CCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCccccccccc---C
Q 027708 8 KRSVLLLCGD--------------YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETR---G 70 (220)
Q Consensus 8 ~~kI~il~~~--------------g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~---g 70 (220)
+|||+|++.+ ||+..|+..|+++|+.+|++|+++|+++++.....++ ....+..+.++. |
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~~v~~d~~s---~~~~~~~~~~~~~~~g 124 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWA---MPHKDEKVMPFFEQHK 124 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSCCCCBCGGG---CCTTCTTHHHHHHHHH
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccc---cccccHHHHHHHHhcc
Confidence 4799999985 7999999999999999999999999987632111121 111111333333 7
Q ss_pred cccccCcCcCCC-----CCCCccEEEEcCCCCcc-cccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCc----ccCCc
Q 027708 71 HNFALNATFDEI-----DPTKYDGLVIPGGRAPE-YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD----VVKGR 140 (220)
Q Consensus 71 ~~i~~~~~l~~~-----~~~~~D~liipGG~~~~-~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ag----lL~g~ 140 (220)
..+.++..++++ +..+||+||||||+++. .+..++.+++||+++++++++|++||+|+++|++++ ||+||
T Consensus 125 ~~l~~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a~~~~GLL~Gr 204 (291)
T 1n57_A 125 SLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGY 204 (291)
T ss_dssp HHHHSCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGGTTSCCTTTTC
T ss_pred ceecCCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhhcccCccCCCC
Confidence 788898888873 45789999999998876 577899999999999999999999999999988874 99999
Q ss_pred eEecCCCCHHHH-------------------HHCCCeEecCCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHccccc
Q 027708 141 KCTAYPPVKPVL-------------------IAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTIT 199 (220)
Q Consensus 141 ~~T~~~~~~~~l-------------------~~~g~~~~~~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~~~~a 199 (220)
++|+||...+.+ ++.|+.+++.+.+..+|+|||+|||+|+.++++|++++|+.+.++..
T Consensus 205 ~~Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~~ 282 (291)
T 1n57_A 205 SICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYA 282 (291)
T ss_dssp EECCCCGGGGGTTTTTTSSSSCCSSCHHHHHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCCHHHhhhccccccccccchhHHHHHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCchh
Confidence 999999877654 34577887422223599999999999999999999999999887744
No 28
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=100.00 E-value=2.7e-33 Score=224.33 Aligned_cols=179 Identities=20% Similarity=0.248 Sum_probs=144.4
Q ss_pred CCeEEEEec-----CCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccC------
Q 027708 8 KRSVLLLCG-----DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALN------ 76 (220)
Q Consensus 8 ~~kI~il~~-----~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~------ 76 (220)
++||+|+++ +||+..|+..|+++|+.+|+++.++|+++++.. .+. ..++. ++.++.|+.+.++
T Consensus 6 m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g~~~~--v~d--~~s~~--~~~~~~g~~i~~~~~~~~~ 79 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVD--VIN--HLTGE--AMTETRNVLIEAARITRGE 79 (232)
T ss_dssp CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSC--CBC--TTTCC--BCSCCCBHHHHHTTTTTTC
T ss_pred CCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCCCc--ccc--ccccc--chhhhhhhhHHHHHhhhcC
Confidence 479999999 999999999999999999999999999875310 000 11111 4567778877776
Q ss_pred -cCcCCCCCCCccEEEEcCCCCcc-----------cccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccC-CceEe
Q 027708 77 -ATFDEIDPTKYDGLVIPGGRAPE-----------YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVK-GRKCT 143 (220)
Q Consensus 77 -~~l~~~~~~~~D~liipGG~~~~-----------~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~-g~~~T 143 (220)
..+++++..+||+||||||.++. .+..++.+.+||++++++|++|++||+|+++|+++ |+ ||++|
T Consensus 80 ~~~l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a--L~~Gr~~T 157 (232)
T 1vhq_A 80 IRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI--FDFPLRLT 157 (232)
T ss_dssp CEEGGGCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH--CSSCCEEC
T ss_pred CCCHHHcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH--hcCCCEEe
Confidence 78888766789999999998652 12248999999999999999999999999999999 79 99999
Q ss_pred cC-C-CCHHHHHHCCCeEecCCCCceEEE-cCCEEeCCCCCCHHHHHHHHHHHHcccc
Q 027708 144 AY-P-PVKPVLIAAGASWIEPETMAACVV-DGNIITGATYEGHPEFIRLFLKALGGTI 198 (220)
Q Consensus 144 ~~-~-~~~~~l~~~g~~~~~~~~~~~~v~-dg~iiTs~g~~s~~~~~~~li~~l~~~~ 198 (220)
+| | ..++.+++.|+.|++.+.+..+++ |||+|||+ ++++++++|+++.|..
T Consensus 158 th~~~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liTs~----~~d~al~lv~~~~G~~ 211 (232)
T 1vhq_A 158 IGTDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTP----AYMLAQNIAEAASGID 211 (232)
T ss_dssp CCSCHHHHHHHHHTTCEECCCCTTCCEEETTTTEEEEC----GGGTCSSHHHHHHHHH
T ss_pred ccCCHHHHHHHHHcCCEEecCCCCceEEecCCCEEECC----CHHHHHHHHHHHcCHH
Confidence 99 5 667888888999887532223554 59999997 8899999999888774
No 29
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.97 E-value=1e-31 Score=215.77 Aligned_cols=167 Identities=20% Similarity=0.234 Sum_probs=135.6
Q ss_pred CeEEEEec-----CCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccC-------
Q 027708 9 RSVLLLCG-----DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALN------- 76 (220)
Q Consensus 9 ~kI~il~~-----~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~------- 76 (220)
+||+|++. |||+..|+..|+++|+++|++|+++|+++++.. .+. ...+ .++.++.|+.+.++
T Consensus 24 kkV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~g~~~--~~~--~~~g--~~v~~s~g~~v~~d~~~~~~~ 97 (242)
T 3l3b_A 24 LNSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNKNQKQ--VVD--HKKK--ESVGEVRNILVESARIARGSV 97 (242)
T ss_dssp CEEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSSBCSC--EEE--TTTT--EEESCCCBHHHHHHHHTTTCE
T ss_pred CEEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCCCccc--ccc--cccC--ccccccCCeEEecchhccccC
Confidence 79999998 999999999999999999999999999875311 010 1111 15777888888887
Q ss_pred cCcCCCCCCCccEEEEcCCCCcc----c--------ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCc-ccCCceEe
Q 027708 77 ATFDEIDPTKYDGLVIPGGRAPE----Y--------LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD-VVKGRKCT 143 (220)
Q Consensus 77 ~~l~~~~~~~~D~liipGG~~~~----~--------~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ag-lL~g~~~T 143 (220)
..++++++.+||+||||||.+.. . +..++.+.+||+++++++|+|++||+|+++|+++| ||+||++|
T Consensus 98 ~~l~dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag~lL~Gr~~T 177 (242)
T 3l3b_A 98 YDIEQIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALLKDIAKVKVT 177 (242)
T ss_dssp EEGGGCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHHTTTCCCEEC
T ss_pred CChHHCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhCcccCCCEEE
Confidence 67888877899999999997631 1 25689999999999999999999999999999999 99999999
Q ss_pred cCCCCHHHHHHCCCeEecCCCCceEEEc--CCEEeCCCCCC
Q 027708 144 AYPPVKPVLIAAGASWIEPETMAACVVD--GNIITGATYEG 182 (220)
Q Consensus 144 ~~~~~~~~l~~~g~~~~~~~~~~~~v~d--g~iiTs~g~~s 182 (220)
+||.....+++.|+.|++.+. ..+|+| ||+|||++...
T Consensus 178 ~~~~~~~~l~~~Ga~~~~~~~-~~vVvD~~g~liTs~a~~~ 217 (242)
T 3l3b_A 178 IGEDSNGLIDKMGGVHVDCPT-IKSVKDDVNRIFSCSAYMR 217 (242)
T ss_dssp CCC----CHHHHTCEECCCCT-TCCEEETTTTEEEECGGGS
T ss_pred ecCChHHHHHHCCCEEEcCCC-CeEEEECCCCEEECcCccc
Confidence 999988778888999998531 137888 99999998754
No 30
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.91 E-value=2.2e-24 Score=194.76 Aligned_cols=151 Identities=18% Similarity=0.230 Sum_probs=131.5
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
++||+||++||++..|+..++++|+.+|+++.+++++++ +|.++.|..+.++..+++++..+|
T Consensus 534 ~rkVaILl~dGfe~~El~~p~dvL~~AG~~V~ivS~~gg-----------------~V~ss~G~~v~~d~~l~~v~~~~y 596 (715)
T 1sy7_A 534 SRRVAIIIADGYDNVAYDAAYAAISANQAIPLVIGPRRS-----------------KVTAANGSTVQPHHHLEGFRSTMV 596 (715)
T ss_dssp TCEEEEECCTTBCHHHHHHHHHHHHHTTCEEEEEESCSS-----------------CEEBTTSCEECCSEETTTCCGGGS
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHhcCCEEEEEECCCC-----------------ceecCCCceEecccccccCCcccC
Confidence 579999999999999999999999999999999999875 788889999999999998877789
Q ss_pred cEEEEcCCC-CcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC-cccCCceEecCCCCHHHHHHCCCeEecCCCC
Q 027708 88 DGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA-DVVKGRKCTAYPPVKPVLIAAGASWIEPETM 165 (220)
Q Consensus 88 D~liipGG~-~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a-glL~g~~~T~~~~~~~~l~~~g~~~~~~~~~ 165 (220)
|+||||||. ++..+..++.+++||+++++++|+|++||+|+++|+++ ||.+-+. .|+ .
T Consensus 597 DaViVPGG~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlGL~~L~~-------------aGa----~--- 656 (715)
T 1sy7_A 597 DAIFIPGGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIALPQVTV-------------SSE----A--- 656 (715)
T ss_dssp SEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHCCTTSCC-------------CCS----S---
T ss_pred CEEEEcCCcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccCcHhHHh-------------cCC----C---
Confidence 999999995 45556789999999999999999999999999999999 9843222 222 2
Q ss_pred ceEEEcCCEEeCCCCC------------CHHHHHHHHHHHHcc
Q 027708 166 AACVVDGNIITGATYE------------GHPEFIRLFLKALGG 196 (220)
Q Consensus 166 ~~~v~dg~iiTs~g~~------------s~~~~~~~li~~l~~ 196 (220)
.+|+||++||++|+. +..+++..+++.+..
T Consensus 657 -~VVvDg~lITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~~ 698 (715)
T 1sy7_A 657 -EVHESYGVVTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIAQ 698 (715)
T ss_dssp -SCEEETTEEEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHHT
T ss_pred -cEEEeCCEEECCCCcccccccccccccCHHHHHHHHHHHHHc
Confidence 389999999999986 667899999988864
No 31
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.83 E-value=1e-20 Score=169.69 Aligned_cols=112 Identities=20% Similarity=0.199 Sum_probs=106.2
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+|||+||+.|||+..|+..++++|+++|.+|.+++++.+ +|.++.|..+.+|.+++++++.+|
T Consensus 600 grKVaILlaDGfEe~El~~pvdaLr~AG~~V~vVS~~~g-----------------~V~gs~G~~V~aD~t~~~v~s~~f 662 (753)
T 3ttv_A 600 GRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMG-----------------EVTADDGTVLPIAATFAGAPSLTV 662 (753)
T ss_dssp TCEEEEECCTTCCHHHHHHHHHHHHHHTCEEEEEESSSS-----------------EEECTTSCEEECCEETTTSCGGGC
T ss_pred CCEEEEEecCCCCHHHHHHHHHHHHHCCCEEEEEEcCCC-----------------eEEeCCCCEEecccchhhCCCcCC
Confidence 589999999999999999999999999999999999765 789999999999999999987889
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCccc
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVV 137 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL 137 (220)
|+|||||| ++..+..++.+++||+++++++|+|++||+|+++|+++||-
T Consensus 663 DALVVPGG-g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa~AGL~ 711 (753)
T 3ttv_A 663 DAVIVPCG-NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIA 711 (753)
T ss_dssp SEEEECCS-CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGGGGTCC
T ss_pred CEEEECCC-ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHHHcCCC
Confidence 99999999 87778899999999999999999999999999999999974
No 32
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.71 E-value=4.3e-17 Score=145.89 Aligned_cols=129 Identities=18% Similarity=0.218 Sum_probs=110.1
Q ss_pred CCeEEEEec--CCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCC
Q 027708 8 KRSVLLLCG--DYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPT 85 (220)
Q Consensus 8 ~~kI~il~~--~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~ 85 (220)
++||+||+. +|++..|+..+.+.|+++|.+|.+++++.+ . .+|.++++++..
T Consensus 529 g~kVaIL~a~~dGfe~~E~~~~~~~L~~aG~~V~vVs~~~g-----------------~---------~vD~t~~~~~s~ 582 (688)
T 2iuf_A 529 GLKVGLLASVNKPASIAQGAKLQVALSSVGVDVVVVAERXA-----------------N---------NVDETYSASDAV 582 (688)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHHGGGTCEEEEEESSCC-----------------T---------TCCEESTTCCGG
T ss_pred CCEEEEEecCCCCCcHHHHHHHHHHHHHCCCEEEEEeccCC-----------------c---------ccccchhcCCcc
Confidence 589999999 999999999999999999999999998532 1 677888888888
Q ss_pred CccEEEEcCCC-C----------------cccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCC
Q 027708 86 KYDGLVIPGGR-A----------------PEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPV 148 (220)
Q Consensus 86 ~~D~liipGG~-~----------------~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~ 148 (220)
+||+||||||. + +..+..+++++++|++++++||+|++||+|+.+|.++|+..
T Consensus 583 ~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~~aGi~~---------- 652 (688)
T 2iuf_A 583 QFDAVVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALESGQISS---------- 652 (688)
T ss_dssp GCSEEEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHHHTTCCT----------
T ss_pred ccCeEEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHHHcCCCC----------
Confidence 99999999995 4 55688899999999999999999999999999999999854
Q ss_pred HHHHHHCCCeEecCCCCceEEEcCCEEeCCCCCCHHHHHHHHHHHHc
Q 027708 149 KPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALG 195 (220)
Q Consensus 149 ~~~l~~~g~~~~~~~~~~~~v~dg~iiTs~g~~s~~~~~~~li~~l~ 195 (220)
.|+++||+.++ .-+++..+++.+.
T Consensus 653 ---------------------~d~GVvts~~~--~~~f~~~fi~~la 676 (688)
T 2iuf_A 653 ---------------------ERQGVYTGKNA--GDAFAKDIKSGLS 676 (688)
T ss_dssp ---------------------TSTTEEEESSS--SHHHHHHHHHHHH
T ss_pred ---------------------CCCCEEEcCCc--cHHHHHHHHHHHH
Confidence 15667887776 4457777777654
No 33
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.66 E-value=4.4e-16 Score=139.10 Aligned_cols=104 Identities=18% Similarity=0.151 Sum_probs=93.6
Q ss_pred CCeEEEEecCC-CCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 8 KRSVLLLCGDY-MEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g-~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
+|||+||+.+| ++..|+..+.+.|+++|..|.+++++.+ .| +|.+++++++.+
T Consensus 537 grKVaILvadG~fE~~El~~p~~aL~~aGa~V~vVsp~~g----------------------~G----vD~t~~~~~s~~ 590 (688)
T 3ej6_A 537 TLRVGVLSTTKGGSLDKAKALKEQLEKDGLKVTVIAEYLA----------------------SG----VDQTYSAADATA 590 (688)
T ss_dssp TCEEEEECCSSSSHHHHHHHHHHHHHHTTCEEEEEESSCC----------------------TT----CCEETTTCCGGG
T ss_pred CCEEEEEccCCCccHHHHHHHHHHHHHCCCEEEEEeCCCC----------------------CC----cccCcccCChhc
Confidence 68999999999 9999999999999999999999998642 13 688899988889
Q ss_pred ccEEEEcCCCCc--------ccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCccc
Q 027708 87 YDGLVIPGGRAP--------EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVV 137 (220)
Q Consensus 87 ~D~liipGG~~~--------~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL 137 (220)
||+|+||||... ..+..++++++||+++++++|+|++||+|+++|.++|+-
T Consensus 591 fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~~AGI~ 649 (688)
T 3ej6_A 591 FDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQSIGVE 649 (688)
T ss_dssp CSEEEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHHHTTCC
T ss_pred CcEEEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHHHcCCC
Confidence 999999999642 567889999999999999999999999999999999973
No 34
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.25 E-value=6.9e-12 Score=98.26 Aligned_cols=93 Identities=23% Similarity=0.307 Sum_probs=73.3
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
+||+|+.++++... ..+.+.|+.+|+++.+++.. + ...++|
T Consensus 3 ~~i~il~~~~~~~~--~~~~~~l~~~g~~~~~~~~~-----------------------------------~--~~~~~d 43 (213)
T 3d54_D 3 PRACVVVYPGSNCD--RDAYHALEINGFEPSYVGLD-----------------------------------D--KLDDYE 43 (213)
T ss_dssp CEEEEECCTTEEEH--HHHHHHHHTTTCEEEEECTT-----------------------------------C--CCSSCS
T ss_pred cEEEEEEcCCCCcc--HHHHHHHHHCCCEEEEEecC-----------------------------------C--CcccCC
Confidence 69999999998741 23589999999988776421 1 124799
Q ss_pred EEEEcCCCCcc-c-----ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCc
Q 027708 89 GLVIPGGRAPE-Y-----LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGR 140 (220)
Q Consensus 89 ~liipGG~~~~-~-----~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~ 140 (220)
.||||||.+.. . +..++.+.+||+++.+++++|.+||.|.++|+.+|+|+|+
T Consensus 44 ~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~ 101 (213)
T 3d54_D 44 LIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGA 101 (213)
T ss_dssp EEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSE
T ss_pred EEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCC
Confidence 99999996532 2 1234678999999999999999999999999999999984
No 35
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=98.57 E-value=4.6e-07 Score=71.93 Aligned_cols=92 Identities=17% Similarity=0.265 Sum_probs=66.9
Q ss_pred eEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccE
Q 027708 10 SVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDG 89 (220)
Q Consensus 10 kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~ 89 (220)
||++|..+.++ .+..+.+.|...|.++.++....+ - .+.+ +..+||+
T Consensus 2 ~i~vi~h~~~e--~~g~~~~~l~~~g~~~~~~~~~~~------------------------~------~~p~-~~~~~d~ 48 (236)
T 3l7n_A 2 RIHFILHETFE--APGAYLAWAALRGHDVSMTKVYRY------------------------E------KLPK-DIDDFDM 48 (236)
T ss_dssp EEEEEECCTTS--CCHHHHHHHHHTTCEEEEEEGGGT------------------------C------CCCS-CGGGCSE
T ss_pred eEEEEeCCCCC--CchHHHHHHHHCCCeEEEEeeeCC------------------------C------CCCC-CccccCE
Confidence 89999988877 445556778999999888754221 0 1111 1247999
Q ss_pred EEEcCCCCc-ccccCC------hHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 90 LVIPGGRAP-EYLAMN------DSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 90 liipGG~~~-~~~~~~------~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|||+||++. .....+ ..+.++|+++.+.++||.+||.|.++|+.+
T Consensus 49 lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~ 100 (236)
T 3l7n_A 49 LILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVA 100 (236)
T ss_dssp EEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHH
T ss_pred EEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHH
Confidence 999999753 211111 348899999999999999999999999875
No 36
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=98.56 E-value=2.7e-07 Score=73.98 Aligned_cols=93 Identities=17% Similarity=0.181 Sum_probs=67.4
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
|+|+||..+.++ ........|+..|+++.++....+. .+ | ++ ..++|
T Consensus 4 ~~vliiqh~~~e--~~~~i~~~l~~~G~~v~v~~~~~~~------------------------~~-p----~~--~~~~d 50 (250)
T 3m3p_A 4 KPVMIIQFSASE--GPGHFGDFLAGEHIPFQVLRMDRSD------------------------PL-P----AE--IRDCS 50 (250)
T ss_dssp CCEEEEESSSSC--CCHHHHHHHHHTTCCEEEEEGGGTC------------------------CC-C----SC--GGGSS
T ss_pred CeEEEEECCCCC--CHHHHHHHHHHCCCeEEEEeccCCC------------------------cC-c----Cc--cccCC
Confidence 579999888777 4555566799999998887643210 00 0 11 24799
Q ss_pred EEEEcCCCCc-cc-ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 89 GLVIPGGRAP-EY-LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 89 ~liipGG~~~-~~-~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.|||+||... .. ......+.++|+++.+.++||.+||.|..+|+.+
T Consensus 51 ~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~ 98 (250)
T 3m3p_A 51 GLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKA 98 (250)
T ss_dssp EEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred EEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 9999999752 21 2223567899999999999999999999999875
No 37
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.56 E-value=5.3e-08 Score=76.53 Aligned_cols=86 Identities=22% Similarity=0.381 Sum_probs=62.4
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
.++|+|+.+++ .+....+.|+.+|.++.+++.. +++ .++
T Consensus 23 ~~~I~il~~~~----~~~~~~~~l~~~G~~~~~~~~~-----------------------------------~~l--~~~ 61 (219)
T 1q7r_A 23 NMKIGVLGLQG----AVREHVRAIEACGAEAVIVKKS-----------------------------------EQL--EGL 61 (219)
T ss_dssp CCEEEEESCGG----GCHHHHHHHHHTTCEEEEECSG-----------------------------------GGG--TTC
T ss_pred CCEEEEEeCCC----CcHHHHHHHHHCCCEEEEECCH-----------------------------------HHH--hhC
Confidence 46899997654 2333568899999987776420 112 369
Q ss_pred cEEEEcCCCCcc--cccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 88 DGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 88 D~liipGG~~~~--~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|.||+|||.... .+..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 62 Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~ 110 (219)
T 1q7r_A 62 DGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKR 110 (219)
T ss_dssp SEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEE
T ss_pred CEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHH
Confidence 999999997422 12223455789999999999999999999999875
No 38
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.54 E-value=6.5e-08 Score=74.59 Aligned_cols=85 Identities=24% Similarity=0.358 Sum_probs=60.8
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
+||+|+-+.+ .+....+.|+++|.++.++++. ++ ..++|
T Consensus 2 m~I~il~~~~----~~~~~~~~l~~~g~~~~~~~~~-----------------------------------~~--l~~~d 40 (196)
T 2nv0_A 2 LTIGVLGLQG----AVREHIHAIEACGAAGLVVKRP-----------------------------------EQ--LNEVD 40 (196)
T ss_dssp CEEEEECSSS----CCHHHHHHHHHTTCEEEEECSG-----------------------------------GG--GGGCS
T ss_pred cEEEEEEccC----CcHHHHHHHHHCCCEEEEeCCh-----------------------------------HH--HhhCC
Confidence 5899997522 2333458999999887766420 11 23699
Q ss_pred EEEEcCCCCcc--cccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 89 GLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 89 ~liipGG~~~~--~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.|++|||.... .+..+..+.++|+++.++++||.+||.|..+|+.+
T Consensus 41 ~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~ 88 (196)
T 2nv0_A 41 GLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKE 88 (196)
T ss_dssp EEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBC
T ss_pred EEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHH
Confidence 99999996421 12223445789999999999999999999999875
No 39
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=98.48 E-value=4e-07 Score=70.40 Aligned_cols=86 Identities=24% Similarity=0.226 Sum_probs=61.9
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
+||+|+-+ ++. .+....+.|+.+|.++.+++.. ++ ..++|
T Consensus 3 ~~I~iid~-~~~--~~~~~~~~l~~~G~~~~~~~~~-----------------------------------~~--l~~~d 42 (200)
T 1ka9_H 3 MKALLIDY-GSG--NLRSAAKALEAAGFSVAVAQDP-----------------------------------KA--HEEAD 42 (200)
T ss_dssp CEEEEECS-SCS--CHHHHHHHHHHTTCEEEEESST-----------------------------------TS--CSSCS
T ss_pred cEEEEEeC-CCc--cHHHHHHHHHHCCCeEEEecCh-----------------------------------HH--cccCC
Confidence 58988844 322 3455689999999887776320 11 23699
Q ss_pred EEEEcCCCCccc---ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 89 GLVIPGGRAPEY---LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 89 ~liipGG~~~~~---~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.|++||+..+.. ...+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 43 ~lil~G~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~ 91 (200)
T 1ka9_H 43 LLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEG 91 (200)
T ss_dssp EEEECCCSCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSE
T ss_pred EEEECCCCcHHHHHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHh
Confidence 999999544321 1123557899999999999999999999999987
No 40
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.43 E-value=1.3e-06 Score=84.05 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=71.8
Q ss_pred CCeEEEEecCCCCc-hhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 8 KRSVLLLCGDYMED-YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g~~~-~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
++||+|+.|+|.+- .+ ....|+.+|+++.++..+. +..+ -. ...+
T Consensus 1047 ~pkVaIi~~~G~N~~~~---~~~A~~~aG~~~~~v~~~d---------------------------l~~~--~~--~l~~ 1092 (1303)
T 3ugj_A 1047 RPKVAVLREQGVNSHVE---MAAAFHRAGFDAIDVHMSD---------------------------LLGG--RI--GLGN 1092 (1303)
T ss_dssp CCEEEEEECTTCCCHHH---HHHHHHHTTCEEEEEEHHH---------------------------HHTT--SC--CGGG
T ss_pred CCEEEEEecCCcCCHHH---HHHHHHHhCCceEEEeecc---------------------------cccC--cc--cHhh
Confidence 46999999999884 44 4457888999877653210 0000 01 1247
Q ss_pred ccEEEEcCCCCccc-----------ccCChHHHHHHHHHH-hCCCeEEEEehHHHHHHhC-cccCCc
Q 027708 87 YDGLVIPGGRAPEY-----------LAMNDSVIDLVRKFS-NSGKTIASICHGQLILAAA-DVVKGR 140 (220)
Q Consensus 87 ~D~liipGG~~~~~-----------~~~~~~l~~~l~~~~-~~g~~i~aic~G~~~La~a-glL~g~ 140 (220)
+|.|++|||....+ ...++.+.+.+++++ ++++++.+||+|.++|.++ |||.|.
T Consensus 1093 ~d~lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1093 FHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIPGS 1159 (1303)
T ss_dssp CSEEEECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGSTTC
T ss_pred CCEEEECCCCcchhhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHHHhcCcCCCC
Confidence 99999999964211 235677888899876 6899999999999999999 999986
No 41
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=98.42 E-value=1.7e-07 Score=73.01 Aligned_cols=86 Identities=20% Similarity=0.305 Sum_probs=61.7
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
.+||+|+-+++ .+....+.|+.+|.++.+++.. +++ .++
T Consensus 20 ~~~I~ii~~~~----~~~~~~~~l~~~g~~~~~~~~~-----------------------------------~~l--~~~ 58 (208)
T 2iss_D 20 HMKIGVLGVQG----DVREHVEALHKLGVETLIVKLP-----------------------------------EQL--DMV 58 (208)
T ss_dssp CCEEEEECSSS----CHHHHHHHHHHTTCEEEEECSG-----------------------------------GGG--GGC
T ss_pred CcEEEEEECCC----chHHHHHHHHHCCCEEEEeCCh-----------------------------------HHH--hhC
Confidence 46899996533 5566778888899887766421 012 369
Q ss_pred cEEEEcCCCCccc--ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 88 DGLVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 88 D~liipGG~~~~~--~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|.||+|||..... +..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 59 d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~ 107 (208)
T 2iss_D 59 DGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKR 107 (208)
T ss_dssp SEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEE
T ss_pred CEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHH
Confidence 9999999843211 1112346789999999999999999999999875
No 42
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.38 E-value=2.6e-07 Score=70.77 Aligned_cols=85 Identities=24% Similarity=0.299 Sum_probs=62.6
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
++|+|+..++ .+....+.|+.+|.++.+++.. ++ .+++|
T Consensus 3 p~Igi~~~~~----~~~~~~~~l~~~G~~~~~~~~~-----------------------------------~~--l~~~d 41 (191)
T 2ywd_A 3 GVVGVLALQG----DFREHKEALKRLGIEAKEVRKK-----------------------------------EH--LEGLK 41 (191)
T ss_dssp CCEEEECSSS----CHHHHHHHHHTTTCCCEEECSG-----------------------------------GG--GTTCS
T ss_pred cEEEEEecCC----chHHHHHHHHHCCCEEEEeCCh-----------------------------------hh--hccCC
Confidence 5899998864 4567788999999876665320 01 13689
Q ss_pred EEEEcCCCCc--ccccCChHHHHHHHHHHhCC-CeEEEEehHHHHHHhC
Q 027708 89 GLVIPGGRAP--EYLAMNDSVIDLVRKFSNSG-KTIASICHGQLILAAA 134 (220)
Q Consensus 89 ~liipGG~~~--~~~~~~~~l~~~l~~~~~~g-~~i~aic~G~~~La~a 134 (220)
.|++|||... ..+..+..+.++|+++.+++ +||.+||.|.++|+.+
T Consensus 42 glil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~ 90 (191)
T 2ywd_A 42 ALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKE 90 (191)
T ss_dssp EEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEE
T ss_pred EEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHH
Confidence 9999999521 22222345688999999999 9999999999999875
No 43
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=98.29 E-value=1.6e-06 Score=66.29 Aligned_cols=86 Identities=16% Similarity=0.302 Sum_probs=61.1
Q ss_pred EEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccEE
Q 027708 11 VLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDGL 90 (220)
Q Consensus 11 I~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~l 90 (220)
|+|+=+.+-. ...+.+.|+.+|.++.++.... .++++...++|.|
T Consensus 3 i~iid~~~~~---~~~~~~~l~~~G~~~~~~~~~~--------------------------------~~~~~~~~~~dgl 47 (189)
T 1wl8_A 3 IVIMDNGGQY---VHRIWRTLRYLGVETKIIPNTT--------------------------------PLEEIKAMNPKGI 47 (189)
T ss_dssp EEEEECSCTT---HHHHHHHHHHTTCEEEEEETTC--------------------------------CHHHHHHTCCSEE
T ss_pred EEEEECCCch---HHHHHHHHHHCCCeEEEEECCC--------------------------------ChHHhcccCCCEE
Confidence 6666554432 5577889999999887775421 1111111259999
Q ss_pred EEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 91 VIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 91 iipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
++|||..+. +...+.++++++.+.++||.+||.|.++|+.+
T Consensus 48 il~Gg~~~~---~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~ 88 (189)
T 1wl8_A 48 IFSGGPSLE---NTGNCEKVLEHYDEFNVPILGICLGHQLIAKF 88 (189)
T ss_dssp EECCCSCTT---CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHH
T ss_pred EECCCCChh---hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHH
Confidence 999997332 24556889987778999999999999999875
No 44
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=98.27 E-value=5e-07 Score=71.23 Aligned_cols=85 Identities=19% Similarity=0.300 Sum_probs=61.2
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhC---CCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCC
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAF---GVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPT 85 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~a---g~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~ 85 (220)
++|+|+.+++. +....+.|+.+ |.++..++. + +++ +
T Consensus 4 ~~I~Il~~~~~----~~~~~~~l~~~~~~G~~~~~~~~--------------------~---------------~~l--~ 42 (227)
T 2abw_A 4 ITIGVLSLQGD----FEPHINHFIKLQIPSLNIIQVRN--------------------V---------------HDL--G 42 (227)
T ss_dssp EEEEEECTTSC----CHHHHHHHHTTCCTTEEEEEECS--------------------H---------------HHH--H
T ss_pred cEEEEEeCCCC----cHHHHHHHHHhccCCeEEEEEcC--------------------c---------------ccc--c
Confidence 58999987742 33467888887 766555431 0 111 2
Q ss_pred CccEEEEcCCCCcc--cccCC--hHHHHHHHHHHhC-CCeEEEEehHHHHHHhC
Q 027708 86 KYDGLVIPGGRAPE--YLAMN--DSVIDLVRKFSNS-GKTIASICHGQLILAAA 134 (220)
Q Consensus 86 ~~D~liipGG~~~~--~~~~~--~~l~~~l~~~~~~-g~~i~aic~G~~~La~a 134 (220)
++|.||+|||.... .+..+ ..+.++|+++.++ ++||.+||.|.++|+.+
T Consensus 43 ~~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~ 96 (227)
T 2abw_A 43 LCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKN 96 (227)
T ss_dssp TCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEE
T ss_pred cCCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHH
Confidence 69999999986321 22233 5688999999999 99999999999999875
No 45
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=98.07 E-value=6.8e-06 Score=62.58 Aligned_cols=81 Identities=20% Similarity=0.307 Sum_probs=55.6
Q ss_pred eEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccE
Q 027708 10 SVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDG 89 (220)
Q Consensus 10 kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~ 89 (220)
||+|+-.++ .+....+.|+.+|.++.+++.. ++ ..++|.
T Consensus 2 ~i~vl~~~g----~~~~~~~~l~~~G~~~~~~~~~-----------------------------------~~--~~~~dg 40 (186)
T 2ywj_A 2 IIGVLAIQG----DVEEHEEAIKKAGYEAKKVKRV-----------------------------------ED--LEGIDA 40 (186)
T ss_dssp EEEEECSSS----CCHHHHHHHHHTTSEEEEECSG-----------------------------------GG--GTTCSE
T ss_pred EEEEEecCc----chHHHHHHHHHCCCEEEEECCh-----------------------------------HH--hccCCE
Confidence 799996644 3445578999999877665310 11 236899
Q ss_pred EEEcCCCCccc--ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 90 LVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 90 liipGG~~~~~--~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|++|||.+... +.....+.++++ ++++||.+||.|.++|+.+
T Consensus 41 lil~GG~~~~~~~~~~~~~~~~~i~---~~~~PilGIC~G~Qll~~~ 84 (186)
T 2ywj_A 41 LIIPGGESTAIGKLMKKYGLLEKIK---NSNLPILGTCAGMVLLSKG 84 (186)
T ss_dssp EEECCSCHHHHHHHHHHTTHHHHHH---TCCCCEEEETHHHHHHSSC
T ss_pred EEECCCCchhhhhhhhccCHHHHHH---hcCCcEEEECHHHHHHHHH
Confidence 99999965221 111122455555 7899999999999999987
No 46
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=98.06 E-value=7e-06 Score=63.32 Aligned_cols=51 Identities=27% Similarity=0.455 Sum_probs=38.2
Q ss_pred CCccEEEEcCCCCccc-cc--CChHHHHHHHHHHhCCCeEEEEehHHHHHHhCc
Q 027708 85 TKYDGLVIPGGRAPEY-LA--MNDSVIDLVRKFSNSGKTIASICHGQLILAAAD 135 (220)
Q Consensus 85 ~~~D~liipGG~~~~~-~~--~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ag 135 (220)
.++|.||+||+..... .. .+..+.++|+++.++++||.+||.|.++|+.+.
T Consensus 41 ~~~dglilpG~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~ 94 (201)
T 1gpw_B 41 DLYDLLFIPGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEES 94 (201)
T ss_dssp SCCSEEEECCCSCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEE
T ss_pred cCCCEEEECCCCcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhh
Confidence 3699999999643221 10 111367899999999999999999999999864
No 47
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=98.01 E-value=5.7e-06 Score=63.62 Aligned_cols=89 Identities=15% Similarity=0.130 Sum_probs=57.9
Q ss_pred EEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccEE
Q 027708 11 VLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDGL 90 (220)
Q Consensus 11 I~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~l 90 (220)
|+|+=..+.. ...+.+.|+++|.++.++..... .++++...++|.|
T Consensus 4 i~iid~~~s~---~~~~~~~l~~~G~~~~v~~~~~~-------------------------------~~~~~~~~~~dgl 49 (195)
T 1qdl_B 4 TLIIDNYDSF---VYNIAQIVGELGSYPIVIRNDEI-------------------------------SIKGIERIDPDRL 49 (195)
T ss_dssp EEEEECSCSS---HHHHHHHHHHTTCEEEEEETTTS-------------------------------CHHHHHHHCCSEE
T ss_pred EEEEECCCch---HHHHHHHHHhCCCEEEEEeCCCC-------------------------------CHHHHhhCCCCEE
Confidence 7777643322 34678899999998877754210 1112211259999
Q ss_pred EEcCCCCccccc-CChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 91 VIPGGRAPEYLA-MNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 91 iipGG~~~~~~~-~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|++||.+..... +.+...++++++ +.++||.+||.|.++|+.+
T Consensus 50 il~gG~~~~~~~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~ 93 (195)
T 1qdl_B 50 IISPGPGTPEKREDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYA 93 (195)
T ss_dssp EECCCSSCTTSHHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHH
T ss_pred EECCCCCChhhhhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHH
Confidence 998886532211 112346888875 7899999999999999875
No 48
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=97.99 E-value=1.7e-06 Score=67.30 Aligned_cols=86 Identities=19% Similarity=0.215 Sum_probs=57.9
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
+||+|+=|-. --+......|+..|.++.++.. . +++ .++|
T Consensus 3 ~~I~iiD~g~---~n~~si~~al~~~G~~~~v~~~-~----------------------------------~~l--~~~D 42 (211)
T 4gud_A 3 QNVVIIDTGC---ANISSVKFAIERLGYAVTISRD-P----------------------------------QVV--LAAD 42 (211)
T ss_dssp CCEEEECCCC---TTHHHHHHHHHHTTCCEEEECC-H----------------------------------HHH--HHCS
T ss_pred CEEEEEECCC---ChHHHHHHHHHHCCCEEEEECC-H----------------------------------HHH--hCCC
Confidence 6788874432 2456677889999998776531 0 111 2589
Q ss_pred EEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 89 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 89 ~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.||+||+..+...........+++...+.++||.+||.|.++|+.+
T Consensus 43 ~lilPG~g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~ 88 (211)
T 4gud_A 43 KLFLPGVGTASEAMKNLTERDLIELVKRVEKPLLGICLGMQLLGKL 88 (211)
T ss_dssp EEEECCCSCHHHHHHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSE
T ss_pred EEEECCCCCHHHHHHHHHhcChHHHHHHcCCCEEEEchhHhHHHHH
Confidence 9999986554322122233345677778899999999999999865
No 49
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.93 E-value=2.3e-05 Score=62.25 Aligned_cols=93 Identities=18% Similarity=0.150 Sum_probs=62.2
Q ss_pred EEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccEE
Q 027708 11 VLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDGL 90 (220)
Q Consensus 11 I~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~l 90 (220)
|-|++..............+|+..|.++.++.... + + .+.+ ...++|.|
T Consensus 13 ~~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~------------------------~-----~-~~~~-~l~~~Dgl 61 (239)
T 1o1y_A 13 VRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPK------------------------G-----E-KLER-PLEEYSLV 61 (239)
T ss_dssp CEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGG------------------------T-----C-CCSS-CGGGCSEE
T ss_pred eEEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcC------------------------c-----c-cccc-chhcCCEE
Confidence 44445455555566688889999998876543210 0 0 1111 12379999
Q ss_pred EEcCCCC-cccccCC---hHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 91 VIPGGRA-PEYLAMN---DSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 91 iipGG~~-~~~~~~~---~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|+|||.. +..-... ..+.++|+++.++++||.+||.|.++|+.+
T Consensus 62 il~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~a 109 (239)
T 1o1y_A 62 VLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKV 109 (239)
T ss_dssp EECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred EECCCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHH
Confidence 9999973 2111112 367899999999999999999999999875
No 50
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.90 E-value=3.1e-05 Score=65.46 Aligned_cols=87 Identities=20% Similarity=0.241 Sum_probs=63.6
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
+||+++=+ |+. ......|..+|..+.++..+. ..+++...++|
T Consensus 191 ~~V~viD~-G~k----~ni~r~L~~~G~~v~vvp~~~--------------------------------~~e~i~~~~~D 233 (379)
T 1a9x_B 191 FHVVAYDF-GAK----RNILRMLVDRGCRLTIVPAQT--------------------------------SAEDVLKMNPD 233 (379)
T ss_dssp EEEEEEES-SCC----HHHHHHHHHTTEEEEEEETTC--------------------------------CHHHHHTTCCS
T ss_pred CEEEEEEC-CCh----HHHHHHHHHCCCEEEEEeccC--------------------------------CHHHHhhcCCC
Confidence 47887777 554 457888999998887763321 01111112699
Q ss_pred EEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 89 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 89 ~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.||++||++.. .......++|+++.++++||.+||.|.++|+.+
T Consensus 234 GliLsGGPgdp--~~~~~~~~~Ir~~~~~~~PILGIClG~QLLa~A 277 (379)
T 1a9x_B 234 GIFLSNGPGDP--APCDYAITAIQKFLETDIPVFGICLGHQLLALA 277 (379)
T ss_dssp EEEECCCSBCS--TTCHHHHHHHHHHTTSCCCEEEETHHHHHHHHH
T ss_pred EEEEeCCCCCh--HHHHHHHHHHHHHHHcCCCEEEECchHHHHHHH
Confidence 99999997532 245788899999999999999999999999875
No 51
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=97.75 E-value=5.3e-05 Score=60.65 Aligned_cols=49 Identities=33% Similarity=0.556 Sum_probs=38.5
Q ss_pred CccEEEEcCCCCc--ccc-------------cCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 86 KYDGLVIPGGRAP--EYL-------------AMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 86 ~~D~liipGG~~~--~~~-------------~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.+|.|+++||.+. ..+ .++...+++|+++.++++||.+||.|.++|+.+
T Consensus 61 ~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a 124 (254)
T 3fij_A 61 LVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVA 124 (254)
T ss_dssp TCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 6999999999651 111 012347899999999999999999999999875
No 52
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=97.72 E-value=8.4e-06 Score=63.89 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=52.3
Q ss_pred CeEEEEecC-CCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 9 RSVLLLCGD-YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 9 ~kI~il~~~-g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+||+||=+. ++. ..+...|+.+|.++.++..+.. .+++...++
T Consensus 25 ~~I~iiD~g~~~~----~~i~~~l~~~G~~~~vv~~~~~--------------------------------~~~l~~~~~ 68 (218)
T 2vpi_A 25 GAVVILDAGAQYG----KVIDRRVRELFVQSEIFPLETP--------------------------------AFAIKEQGF 68 (218)
T ss_dssp TCEEEEECSTTTT----HHHHHHHHHTTCCEEEECTTCC--------------------------------HHHHHHHTC
T ss_pred CeEEEEECCCchH----HHHHHHHHHCCCEEEEEECCCC--------------------------------hHHHhhcCC
Confidence 689999654 442 4567889999988877643210 011111369
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|.||+|||.+...-...+ .+.++..+.++||.+||.|.++|+.+
T Consensus 69 dglil~Gg~~~~~~~~~~---~~~~~~~~~~~PilGIC~G~Qll~~~ 112 (218)
T 2vpi_A 69 RAIIISGGPNSVYAEDAP---WFDPAIFTIGKPVLGICYGMQMMNKV 112 (218)
T ss_dssp SEEEEEC---------CC---CCCGGGGTSSCCEEEETHHHHHHHHH
T ss_pred CEEEECCCCcccccccch---hHHHHHHHcCCCEEEEcHHHHHHHHH
Confidence 999999997532101111 12234456899999999999999874
No 53
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.63 E-value=0.00014 Score=56.59 Aligned_cols=87 Identities=21% Similarity=0.256 Sum_probs=55.0
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
++||.++-+.+-. .......|+.+|.++.++.... ..+++ .++
T Consensus 13 ~~~i~~id~~~~~---~~~~~~~l~~~G~~~~vv~~~~--------------------------------~~~~l--~~~ 55 (212)
T 2a9v_A 13 MLKIYVVDNGGQW---THREWRVLRELGVDTKIVPNDI--------------------------------DSSEL--DGL 55 (212)
T ss_dssp CCBEEEEEESCCT---TCHHHHHHHHTTCBCCEEETTS--------------------------------CGGGG--TTC
T ss_pred cceEEEEeCCCcc---HHHHHHHHHHCCCEEEEEeCCC--------------------------------CHHHH--hCC
Confidence 4578877654332 3346678888887665553210 12222 249
Q ss_pred cEEEEcCC-CCccc-ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 88 DGLVIPGG-RAPEY-LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 88 D~liipGG-~~~~~-~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|.||+||| ++... ....+.+.+++ .++++||.+||.|.++|+.+
T Consensus 56 DglIl~GG~p~~~~~~~~~~~l~~~~---~~~~~PiLGIC~G~Qll~~~ 101 (212)
T 2a9v_A 56 DGLVLSGGAPNIDEELDKLGSVGKYI---DDHNYPILGICVGAQFIALH 101 (212)
T ss_dssp SEEEEEEECSCGGGTGGGHHHHHHHH---HHCCSCEEEETHHHHHHHHH
T ss_pred CEEEECCCCCCCCcccccchhHHHHH---HhCCCCEEEEChHHHHHHHH
Confidence 99999999 54322 11223444444 47899999999999999875
No 54
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.50 E-value=9.5e-05 Score=65.69 Aligned_cols=88 Identities=20% Similarity=0.181 Sum_probs=61.0
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
++|+|+-+.. ..+....+.|+.+|..+.++.... + .. ...+|
T Consensus 5 ~~I~Iid~~~---g~~~~~~~~l~~~G~~~~vv~~~~------------------------------~---~~--l~~~D 46 (555)
T 1jvn_A 5 PVVHVIDVES---GNLQSLTNAIEHLGYEVQLVKSPK------------------------------D---FN--ISGTS 46 (555)
T ss_dssp CEEEEECCSC---SCCHHHHHHHHHTTCEEEEESSGG------------------------------G---CC--STTCS
T ss_pred CEEEEEECCC---CCHHHHHHHHHHCCCEEEEECCcc------------------------------c---cc--cccCC
Confidence 4899997641 233567788999998877764210 0 11 23699
Q ss_pred EEEEcCCCCcccc---cCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 89 GLVIPGGRAPEYL---AMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 89 ~liipGG~~~~~~---~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.||+|||..+... ..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 47 glILpGgG~~~~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a 95 (555)
T 1jvn_A 47 RLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAG 95 (555)
T ss_dssp CEEEEECSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEE
T ss_pred EEEECCCCchHhHhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhh
Confidence 9999995442211 112235789999999999999999999999885
No 55
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=97.43 E-value=0.00019 Score=63.35 Aligned_cols=89 Identities=16% Similarity=0.152 Sum_probs=55.0
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
..||+|+=|..- -.......|+..|..+.++..+. ..+++....+
T Consensus 10 ~~~I~IlD~g~~---~~~~i~r~lr~~Gv~~~i~p~~~--------------------------------~~~~i~~~~~ 54 (527)
T 3tqi_A 10 QHRILILDFGSQ---YAQLIARRVREIGVYCELMPCDI--------------------------------DEETIRDFNP 54 (527)
T ss_dssp CSEEEEEECSCT---THHHHHHHHHHHTCEEEEEETTC--------------------------------CSSSSTTTCC
T ss_pred CCeEEEEECCCc---cHHHHHHHHHHCCCeEEEEECCC--------------------------------CHHHHHhcCC
Confidence 358888866322 22456778888898777763221 1122222257
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|.||+|||++..+ +.......++.++.++||.+||.|.++|+.+
T Consensus 55 dgIILsGGp~sv~---~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~ 98 (527)
T 3tqi_A 55 HGIILSGGPETVT---LSHTLRAPAFIFEIGCPVLGICYGMQTMAYQ 98 (527)
T ss_dssp SEEEECCCCC------------CCCSTTTSSSCEEEETHHHHHHHHH
T ss_pred CEEEECCcCcccc---cCCChhhHHHHHhcCCCEEEEChHHHHHHHH
Confidence 9999999975321 2222333455677899999999999999865
No 56
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=97.43 E-value=4.7e-05 Score=59.09 Aligned_cols=48 Identities=19% Similarity=0.144 Sum_probs=39.5
Q ss_pred CccEEEEcCCCCcc--cccCChHHHHHHHHHHhCCCeEEEEehHHHHHHh
Q 027708 86 KYDGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 133 (220)
Q Consensus 86 ~~D~liipGG~~~~--~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ 133 (220)
+.|.|++|||.... .......+.+.|+++.++|++++++|.|+.++++
T Consensus 79 ~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~~ 128 (206)
T 3l4e_A 79 KNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSP 128 (206)
T ss_dssp HSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTSS
T ss_pred hCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhcc
Confidence 68999999986432 2234567889999999999999999999999975
No 57
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=97.40 E-value=0.00029 Score=58.11 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=59.6
Q ss_pred CeEEEEecCCCCc--------hhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcC
Q 027708 9 RSVLLLCGDYMED--------YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFD 80 (220)
Q Consensus 9 ~kI~il~~~g~~~--------~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~ 80 (220)
+.|+|+...+... .-.....+.|+.+|..+.++..... + ..+.
T Consensus 31 P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~----------------------------~-~~i~ 81 (315)
T 1l9x_A 31 PIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLT----------------------------E-KDYE 81 (315)
T ss_dssp CEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCC----------------------------H-HHHH
T ss_pred CEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCC----------------------------H-HHHH
Confidence 5899987643211 1123467888899988877754210 0 0111
Q ss_pred CCCCCCccEEEEcCCCC-cccc---cCChHHHHHHHHHHhCC--CeEEEEehHHHHHHhC
Q 027708 81 EIDPTKYDGLVIPGGRA-PEYL---AMNDSVIDLVRKFSNSG--KTIASICHGQLILAAA 134 (220)
Q Consensus 81 ~~~~~~~D~liipGG~~-~~~~---~~~~~l~~~l~~~~~~g--~~i~aic~G~~~La~a 134 (220)
+. ..++|.||+|||.+ +... .....+.++++++.++| +||.+||.|.++|+.+
T Consensus 82 ~~-l~~~dglil~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a 140 (315)
T 1l9x_A 82 IL-FKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLL 140 (315)
T ss_dssp HH-HHHSSEEEECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHH
T ss_pred HH-HhcCCEEEEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHH
Confidence 10 13689999999973 2110 01135677777777665 9999999999999754
No 58
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=97.39 E-value=0.00015 Score=59.15 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=39.1
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHh
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 133 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ 133 (220)
++|.||+|||++... ...+.++++++.+.++||.+||.|.++|+.
T Consensus 90 ~~dgiil~GG~~~~~---~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~ 134 (289)
T 2v4u_A 90 KADGILVPGGFGIRG---TLGKLQAISWARTKKIPFLGVXLGMQLAVI 134 (289)
T ss_dssp HCSEEEECSCCSSTT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred hCCEEEecCCCCchh---HHHHHHHHHHHHHcCCcEEEECccHHHHHH
Confidence 689999999976532 367889999999999999999999999987
No 59
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=97.34 E-value=5e-05 Score=59.86 Aligned_cols=49 Identities=10% Similarity=0.150 Sum_probs=39.3
Q ss_pred CccEEEEcCCCCcc--cccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 86 KYDGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 86 ~~D~liipGG~~~~--~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
+.|.||+|||.... .......+.+.|+++.++|++++++|.|+.+|++.
T Consensus 79 ~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~~~ 129 (229)
T 1fy2_A 79 KAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPT 129 (229)
T ss_dssp HCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTSSB
T ss_pred cCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhccc
Confidence 68999999986432 22334568889999999999999999999999764
No 60
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=97.10 E-value=0.0029 Score=57.13 Aligned_cols=89 Identities=19% Similarity=0.256 Sum_probs=59.9
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
.|+|+|+=+.. .=...+...|+..|..+.++..+. + . ...++
T Consensus 446 Gk~IlviD~gd---sf~~~l~~~l~~~G~~v~Vv~~d~------------------~---------------~--~~~~~ 487 (645)
T 3r75_A 446 GCRALIVDAED---HFTAMIAQQLSSLGLATEVCGVHD------------------A---------------V--DLARY 487 (645)
T ss_dssp TCEEEEEESSC---THHHHHHHHHHHTTCEEEEEETTC------------------C---------------C--CGGGC
T ss_pred CCEEEEEECCc---cHHHHHHHHHHHCCCEEEEEECCC------------------c---------------c--cccCC
Confidence 35666554322 123456778888998887764321 0 0 12368
Q ss_pred cEEEEcCCCCcccccCCh---HHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 88 DGLVIPGGRAPEYLAMND---SVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~---~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|.|||+||++...-..++ .+.++|++..+.++||.+||-|.++|+.+
T Consensus 488 DgIIlsGGPg~p~d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~a 537 (645)
T 3r75_A 488 DVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAI 537 (645)
T ss_dssp SEEEECCCSSCTTCTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred CEEEECCCCCChhhhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
Confidence 999999998643212222 46788899888999999999999999865
No 61
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=97.04 E-value=0.0031 Score=51.77 Aligned_cols=56 Identities=16% Similarity=0.248 Sum_probs=40.9
Q ss_pred CcCCCCCCCccEEEEcCCCC-ccc---ccCChHHHHHHHHHHhCCCeEEEEehHHHHHHh
Q 027708 78 TFDEIDPTKYDGLVIPGGRA-PEY---LAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 133 (220)
Q Consensus 78 ~l~~~~~~~~D~liipGG~~-~~~---~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ 133 (220)
++++....+||.+||.|++- ... ..--.++.++++...++++++.+||-|+.+++.
T Consensus 103 ~f~~~~~~~~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~ 162 (312)
T 2h2w_A 103 TFSAVKDRKFDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLY 162 (312)
T ss_dssp CGGGTTTCCEEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHH
T ss_pred CcccccccCcCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHH
Confidence 34554456899999999973 211 112257888888888899999999999998443
No 62
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=97.00 E-value=0.00062 Score=54.98 Aligned_cols=45 Identities=16% Similarity=0.198 Sum_probs=37.9
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHh
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 133 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ 133 (220)
++|.||+|||++.. ..+...++++++.+.++||.+||.|.++|+.
T Consensus 67 ~~dgiil~GG~~~~---~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~ 111 (273)
T 2w7t_A 67 GCDGIFVPGGFGNR---GVDGKCAAAQVARMNNIPYFGVXLGMQVAVI 111 (273)
T ss_dssp TCSEEEECCCCTTT---THHHHHHHHHHHHHHTCCEEEETHHHHHHHH
T ss_pred hCCEEEecCCCCCc---CchhHHHHHHHHHHCCCcEEEECcCHHHHHH
Confidence 68999999997642 2345778999998899999999999999975
No 63
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.99 E-value=0.0025 Score=56.56 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=57.1
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
.+|+||=|-.- -.......|+..|..+.++..+. .++++....+|
T Consensus 8 ~~IlilD~Gs~---~~~~I~r~lre~Gv~~eiv~~~~--------------------------------~~~~i~~~~~d 52 (556)
T 3uow_A 8 DKILVLNFGSQ---YFHLIVKRLNNIKIFSETKDYGV--------------------------------ELKDIKDMNIK 52 (556)
T ss_dssp CEEEEEESSCT---THHHHHHHHHHTTCCEEEEETTC--------------------------------CGGGTTTSCEE
T ss_pred CEEEEEECCCc---cHHHHHHHHHHCCCeEEEEECCC--------------------------------CHHHHhhcCCC
Confidence 57777755321 23456778888998777764321 12222223799
Q ss_pred EEEEcCCCCcccccCChHHH-HHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 89 GLVIPGGRAPEYLAMNDSVI-DLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 89 ~liipGG~~~~~~~~~~~l~-~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.||+|||++.......+.+. .+++.+.++++||.+||.|.++|+.+
T Consensus 53 gIIlsGGp~s~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~ 99 (556)
T 3uow_A 53 GVILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQ 99 (556)
T ss_dssp EEEECCCSCCTTSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred EEEECCCCCcccccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHH
Confidence 99999997532211112222 33444566799999999999999875
No 64
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=96.74 E-value=0.00098 Score=58.79 Aligned_cols=89 Identities=15% Similarity=0.190 Sum_probs=55.5
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
.++|+|+=+.+-. .......|+.+|..+.++..+.. + ..+.+. .+
T Consensus 7 ~~~IlIlD~g~~~---~~~i~r~lr~~G~~~~i~p~~~~----------------------------~-~~i~~~---~~ 51 (525)
T 1gpm_A 7 KHRILILDFGSQY---TQLVARRVRELGVYCELWAWDVT----------------------------E-AQIRDF---NP 51 (525)
T ss_dssp SSEEEEEECSCTT---HHHHHHHHHHTTCEEEEEESCCC----------------------------H-HHHHHH---CC
T ss_pred CCEEEEEECCCcc---HHHHHHHHHHCCCEEEEEECCCC----------------------------H-HHHhcc---CC
Confidence 3579888665322 24566889999987777643210 0 011111 46
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|.||+|||++..+-...+.+ .++..+.++||.+||.|.++|+.+
T Consensus 52 dgiILsGGp~s~~~~~~~~~---~~~~~~~g~PvLGIC~G~Qlla~~ 95 (525)
T 1gpm_A 52 SGIILSGGPESTTEENSPRA---PQYVFEAGVPVFGVCYGMQTMAMQ 95 (525)
T ss_dssp SEEEECCCSSCTTSTTCCCC---CGGGGTSSSCEEEETHHHHHHHHH
T ss_pred CEEEECCcCccccccCCcch---HHHHHHCCCCEEEEChHHHHHHHH
Confidence 99999999753221111211 244567899999999999999875
No 65
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=96.69 E-value=0.0025 Score=52.15 Aligned_cols=50 Identities=18% Similarity=0.302 Sum_probs=37.8
Q ss_pred CCCCccEEEEcCCCC-ccc---ccCChHHHHHHHHHHhCCCeEEEEehHHHHHH
Q 027708 83 DPTKYDGLVIPGGRA-PEY---LAMNDSVIDLVRKFSNSGKTIASICHGQLILA 132 (220)
Q Consensus 83 ~~~~~D~liipGG~~-~~~---~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La 132 (220)
....||.+||.|++. ... ..--.++.++++...++++++.+||-|+.+++
T Consensus 96 ~~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l 149 (301)
T 2vdj_A 96 ENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGL 149 (301)
T ss_dssp TTSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHH
T ss_pred cccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHH
Confidence 345799999999973 211 11225788888888889999999999999843
No 66
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=96.45 E-value=0.0038 Score=54.57 Aligned_cols=48 Identities=13% Similarity=0.239 Sum_probs=40.3
Q ss_pred CCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 84 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 84 ~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
..++|.|++|||++.. ......++++.+.++++|+.+||.|.++|+.+
T Consensus 348 L~~~DgIIlpGG~G~~---~~~g~i~~ir~a~~~~~PiLGIClG~Qll~va 395 (535)
T 3nva_A 348 LGNVNGIIVLPGFGSR---GAEGKIKAIKYAREHNIPFLGICFGFQLSIVE 395 (535)
T ss_dssp TTSCSEEEECCCCSST---THHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred ccCCCEEEECCCCCCc---cHHHHHHHHHHHHHcCCcEEEECcchhHHHHH
Confidence 3589999999998743 34678899999999999999999999988654
No 67
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=96.24 E-value=0.01 Score=45.03 Aligned_cols=45 Identities=18% Similarity=0.218 Sum_probs=29.6
Q ss_pred ccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 87 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 87 ~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.|.+|+.||.+... +.....++++ ..++++||.+||.|.++|+.+
T Consensus 48 ~~~iil~gGpg~~~--~~~~~~~l~~-~~~~~~PilGIC~G~Qll~~~ 92 (192)
T 1i1q_B 48 NPVLMLSPGPGVPS--EAGCMPELLT-RLRGKLPIIGICLGHQAIVEA 92 (192)
T ss_dssp SEEEEECCCSSCGG--GSTTHHHHHH-HHBTTBCEEEETHHHHHHHHH
T ss_pred CCeEEECCCCcCch--hCchHHHHHH-HHhcCCCEEEECcChHHHHHH
Confidence 34477777765322 1222333444 456899999999999999875
No 68
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=96.10 E-value=0.0084 Score=52.87 Aligned_cols=46 Identities=20% Similarity=0.318 Sum_probs=38.9
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHh
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 133 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ 133 (220)
..+|.||+|||++... .....++++++.+.++|+.+||.|-++|+.
T Consensus 342 ~~~DGIilsGGpg~~~---~~g~~~~i~~a~~~~~PiLGIClG~Qll~v 387 (545)
T 1s1m_A 342 KGLDAILVPGGFGYRG---VEGMITTARFARENNIPYLGICLGMQVALI 387 (545)
T ss_dssp TTCSEEEECCCCSSTT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHH
T ss_pred hcCCEEEECCCCCCcc---chhhHHHHHHHHHCCCcEEEECChHHHHHH
Confidence 4799999999986432 356778999999899999999999999985
No 69
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=96.09 E-value=0.0058 Score=53.95 Aligned_cols=47 Identities=17% Similarity=0.279 Sum_probs=38.8
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
..+|.||+|||++... ....+++++.+.++++|+.+||-|-++|+.+
T Consensus 354 ~~~DGIILpGGfGd~~---~~g~i~~ir~a~e~~iPiLGICLGmQlL~~a 400 (550)
T 1vco_A 354 RDVSGILVPGGFGVRG---IEGKVRAAQYARERKIPYLGICLGLQIAVIE 400 (550)
T ss_dssp TTCSCEEECCCCSSTT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hcCCEEEECCCCCCcc---hhhhHHHHHHHHHCCCcEEEECcCHHHHHHH
Confidence 4799999999976432 3456788998888999999999999998764
No 70
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=95.33 E-value=0.016 Score=50.69 Aligned_cols=46 Identities=22% Similarity=0.371 Sum_probs=32.0
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.+|.||+|||++..+-...+.+ .++..+.++||.+||.|.++|+.+
T Consensus 42 ~~dgiIlsGGp~s~~~~~~~~~---~~~~~~~~~PvLGIC~G~Qlla~~ 87 (503)
T 2ywb_A 42 RPQALILSGGPRSVFDPDAPRP---DPRLFSSGLPLLGICYGMQLLAQE 87 (503)
T ss_dssp CCSEEEECCCSSCSSCTTCCCC---CGGGGCSSCCEEEETHHHHHHHHT
T ss_pred CCCEEEECCCCchhccCCCcch---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 4799999999753221111111 244557899999999999999876
No 71
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=95.20 E-value=0.0056 Score=55.72 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=52.1
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
..+|+||-+.+-. .+ .....|+..|..+.++..+. ..+++...++
T Consensus 29 ~~~I~VLDfg~q~-~~--liar~lre~Gv~~~ivp~~~--------------------------------~~e~i~~~~~ 73 (697)
T 2vxo_A 29 EGAVVILDAGAQY-GK--VIDRRVRELFVQSEIFPLET--------------------------------PAFAIKEQGF 73 (697)
T ss_dssp CCCEEEEEEC--C-HH--HHHHHHHHTTCCEEEEETTC--------------------------------CHHHHHHHTC
T ss_pred CCEEEEEECCCch-HH--HHHHHHHHCCCEEEEEECCC--------------------------------CHHHHhhcCC
Confidence 3578888776522 12 24578888898777764321 1111111368
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
|.||++||++..+-...+.+ .++..+.++||.+||.|.++|+.+
T Consensus 74 dGIILsGGp~s~~~~~~~~~---~~~i~~~g~PvLGIC~G~QlLa~~ 117 (697)
T 2vxo_A 74 RAIIISGGPNSVYAEDAPWF---DPAIFTIGKPVLGICYGMQMMNKV 117 (697)
T ss_dssp SEEEEEECC-------CCCC---CGGGTTSSCCEEEEEHHHHHHHHH
T ss_pred CEEEECCCCCcccCccchhH---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 99999999863211111111 133456899999999999999875
No 72
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=93.92 E-value=0.026 Score=45.81 Aligned_cols=48 Identities=19% Similarity=0.416 Sum_probs=40.0
Q ss_pred CccEEEEcCCCCcc--cccCChHHHHHHHHHHhCC-CeEEEEehHHHHHHh
Q 027708 86 KYDGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSG-KTIASICHGQLILAA 133 (220)
Q Consensus 86 ~~D~liipGG~~~~--~~~~~~~l~~~l~~~~~~g-~~i~aic~G~~~La~ 133 (220)
+.|+|+|+||.... .......+.+.|++.+++| .++++.|+|+.+++.
T Consensus 110 ~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~~ 160 (291)
T 3en0_A 110 QCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMGH 160 (291)
T ss_dssp HCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTSS
T ss_pred cCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhhH
Confidence 68999999996532 2346778999999999999 899999999998753
No 73
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=89.61 E-value=1.3 Score=35.15 Aligned_cols=84 Identities=14% Similarity=0.016 Sum_probs=53.4
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
|+||+|+- ..........+.+.|+..|++|++++...-+ . +.++ ..+|
T Consensus 4 m~~vLiV~-g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~---------------------------~--~~~~--L~~y 51 (259)
T 3rht_A 4 MTRVLYCG-DTSLETAAGYLAGLMTSWQWEFDYIPSHVGL---------------------------D--VGEL--LAKQ 51 (259)
T ss_dssp --CEEEEE-SSCTTTTHHHHHHHHHHTTCCCEEECTTSCB---------------------------C--SSHH--HHTC
T ss_pred CceEEEEC-CCCchhHHHHHHHHHHhCCceEEEecccccc---------------------------c--ChhH--HhcC
Confidence 47888883 2223446667788999999999988754210 0 1122 2489
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
|+||++.- .... -++...+.|+++.++|.-++.+..
T Consensus 52 DvIIl~d~-~~~~--l~~~~~~~L~~yV~~GGgLi~~gG 87 (259)
T 3rht_A 52 DLVILSDY-PAER--MTAQAIDQLVTMVKAGCGLVMLGG 87 (259)
T ss_dssp SEEEEESC-CGGG--BCHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEcCC-cccc--CCHHHHHHHHHHHHhCCeEEEecC
Confidence 99999842 2222 356777888888888887777653
No 74
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=79.32 E-value=8.1 Score=34.86 Aligned_cols=88 Identities=14% Similarity=0.091 Sum_probs=60.9
Q ss_pred CCeEEEEecCCC------Cc----------hhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCc
Q 027708 8 KRSVLLLCGDYM------ED----------YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGH 71 (220)
Q Consensus 8 ~~kI~il~~~g~------~~----------~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ 71 (220)
+.||+||=.-|- .. .+..++++.|..++++|+.++-+- +.
T Consensus 438 ~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIsfdD-------------------I~----- 493 (759)
T 2zuv_A 438 ELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDD-------------------VL----- 493 (759)
T ss_dssp CSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHHH-------------------HH-----
T ss_pred CceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEecHHH-------------------hc-----
Confidence 478999975321 11 255779999999999999986531 11
Q ss_pred ccccCcCcCCCCCCCccEEEEcCCC-Cc---ccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 72 NFALNATFDEIDPTKYDGLVIPGGR-AP---EYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 72 ~i~~~~~l~~~~~~~~D~liipGG~-~~---~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
.+ + ...+||+||-+|-- .+ .....++...+.||++..+|.-+++++.=
T Consensus 494 ---e~----e-~L~d~DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGep 545 (759)
T 2zuv_A 494 ---AH----G-IDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEP 545 (759)
T ss_dssp ---HH----C-CCTTCCEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEEST
T ss_pred ---cc----c-ccccCCEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeCCc
Confidence 10 1 13589999999822 11 12345799999999999999988888743
No 75
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=75.13 E-value=9 Score=30.86 Aligned_cols=103 Identities=13% Similarity=0.124 Sum_probs=46.8
Q ss_pred CeEEEEecCCCC--chhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 9 RSVLLLCGDYME--DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 9 ~kI~il~~~g~~--~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
+||+|+.-++-. ...+....+.|++.|.++.+.......... ... ... ... ..|..+.. ..-.+....+
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~--~~~---~~~--~~~-~~g~~~~~-~~~~~~~~~~ 75 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGS--LHL---APD--DMR-AMGVEIEV-VDADQHAADG 75 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC--------------------------------------------
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhhhc--ccc---ccc--ccc-cccccccc-cccccccccC
Confidence 689988865432 123556777888899988765443210000 000 000 000 00100100 0001112347
Q ss_pred ccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 87 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 87 ~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
+|++|+.||.| .+...++.+...+.|+.+|-.|.
T Consensus 76 ~d~vi~~GGDG--------T~l~a~~~~~~~~~pvlgi~~G~ 109 (307)
T 1u0t_A 76 CELVLVLGGDG--------TFLRAAELARNASIPVLGVNLGR 109 (307)
T ss_dssp CCCEEEEECHH--------HHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEEeCCH--------HHHHHHHHhccCCCCEEEEeCCC
Confidence 89999999855 33444455555578888886654
No 76
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=74.76 E-value=30 Score=27.47 Aligned_cols=42 Identities=7% Similarity=0.091 Sum_probs=30.0
Q ss_pred CCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHH
Q 027708 84 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQL 129 (220)
Q Consensus 84 ~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~ 129 (220)
..+||+||+-- .+ . .-.+...+-|+++.++|+.++++.++..
T Consensus 56 L~~~D~vV~~~-~~-~--~l~~~~~~~l~~yV~~Ggglv~~H~a~~ 97 (281)
T 4e5v_A 56 FSPYQLVVLDY-NG-D--SWPEETNRRFLEYVQNGGGVVIYHAADN 97 (281)
T ss_dssp CTTCSEEEECC-CS-S--CCCHHHHHHHHHHHHTTCEEEEEGGGGG
T ss_pred hhcCCEEEEeC-CC-C--cCCHHHHHHHHHHHHcCCCEEEEecccc
Confidence 35799999633 21 1 1256777888888889999999988653
No 77
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=70.41 E-value=7.2 Score=28.71 Aligned_cols=103 Identities=17% Similarity=0.074 Sum_probs=50.0
Q ss_pred CeEEEEecCCCCch--hhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 9 RSVLLLCGDYMEDY--EAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 9 ~kI~il~~~g~~~~--e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
+||.|+.+....-. =.-.+.+.+...|.+++++...... .++... .. .. ... ..+....++ ..+
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~-~~~~~~------~~-~~--~~~--~~~~~~~~~--l~~ 71 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAVS-TECEAV------AP-DI--PAE--GALYATLED--LKN 71 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCCEE-C------------------------CCBCCHHH--HHT
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhhcc-chhhhh------cc-cc--ccc--cCchhhHHH--HHH
Confidence 58988887642222 2223455666678888887664320 000000 00 00 000 111111222 237
Q ss_pred ccEEEEcCCCCcccccCChHHHHHHHHHHh-------CCCeEEEEehH
Q 027708 87 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSN-------SGKTIASICHG 127 (220)
Q Consensus 87 ~D~liipGG~~~~~~~~~~~l~~~l~~~~~-------~g~~i~aic~G 127 (220)
+|+||+..-... ..-.+.+..||.+... ++|+++.++++
T Consensus 72 aD~ii~gsP~y~--~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~ 117 (200)
T 2a5l_A 72 CAGLALGSPTRF--GNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTST 117 (200)
T ss_dssp CSEEEEEEECBT--TBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEB
T ss_pred CCEEEEEcChhc--cCccHHHHHHHHHHHHHhhccccCCCEEEEEEec
Confidence 999999542111 1235667777776543 67888777754
No 78
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=68.77 E-value=29 Score=27.66 Aligned_cols=30 Identities=13% Similarity=0.035 Sum_probs=19.5
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEE
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIA 122 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~ 122 (220)
++.|+|+++.... ...+.+.+..+.|+.|.
T Consensus 64 ~~~DvViiatp~~--------~h~~~~~~al~aG~~Vi 93 (304)
T 3bio_A 64 ESVDVALVCSPSR--------EVERTALEILKKGICTA 93 (304)
T ss_dssp SSCCEEEECSCHH--------HHHHHHHHHHTTTCEEE
T ss_pred CCCCEEEECCCch--------hhHHHHHHHHHcCCeEE
Confidence 4799999976422 23455566666777765
No 79
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=67.71 E-value=9.5 Score=31.02 Aligned_cols=37 Identities=11% Similarity=-0.004 Sum_probs=23.9
Q ss_pred CCeEEEEecCCCC---c-hhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYME---D-YEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~---~-~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
++|++|++-+.-- . ..+......|+.+|.++.+...+
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~ 64 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATE 64 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECC
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEec
Confidence 3688888865332 1 22456678888899888776443
No 80
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=67.56 E-value=2.4 Score=30.72 Aligned_cols=50 Identities=24% Similarity=0.313 Sum_probs=35.8
Q ss_pred CCccEEEEcCCCCccccc-CChHHHHHHHHHHhCCCeEEEEehHHHHHHhCc
Q 027708 85 TKYDGLVIPGGRAPEYLA-MNDSVIDLVRKFSNSGKTIASICHGQLILAAAD 135 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~-~~~~l~~~l~~~~~~g~~i~aic~G~~~La~ag 135 (220)
.+.|+|++-||....... .-..+.+.|.+....++.|.++|-=. ++.++|
T Consensus 83 ~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCFms-~F~kag 133 (157)
T 2r47_A 83 GNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCYMD-MFARAG 133 (157)
T ss_dssp CCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEETT-HHHHTT
T ss_pred CCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHH-HHHHcC
Confidence 379999999998654433 34567788888876677799999654 334555
No 81
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=67.00 E-value=20 Score=32.30 Aligned_cols=61 Identities=18% Similarity=0.267 Sum_probs=45.8
Q ss_pred hhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccEEEEcCCCCccccc
Q 027708 23 EAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLA 102 (220)
Q Consensus 23 e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~liipGG~~~~~~~ 102 (220)
++...+..|...|..+++++++. + ...|++||+|.-. .
T Consensus 426 ~~~~~y~aL~~~gi~vD~v~~~~-----------------------------------d--L~~Yklvv~P~~~-----~ 463 (675)
T 3tty_A 426 EVHKYYDALYKQNIQTDMISVEE-----------------------------------D--LSKYKVVIAPVMY-----M 463 (675)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTS-----------------------------------C--CTTCSEEEETTCC-----B
T ss_pred HHHHHHHHHHHcCceEEEecCcC-----------------------------------C--cccCCEEEEeccE-----e
Confidence 56788899999999999986531 2 2479999999742 2
Q ss_pred CChHHHHHHHHHHhCCCeEEEEe
Q 027708 103 MNDSVIDLVRKFSNSGKTIASIC 125 (220)
Q Consensus 103 ~~~~l~~~l~~~~~~g~~i~aic 125 (220)
-++.+.+.|+++.++|..+.+-+
T Consensus 464 ~~~~~~~~L~~yV~~GG~lv~t~ 486 (675)
T 3tty_A 464 VKPGFAERVERFVAQGGTFVTTF 486 (675)
T ss_dssp CCTTHHHHHHHHHHTTCEEEEET
T ss_pred cCHHHHHHHHHHHhcCCEEEEEc
Confidence 36778888898988887766554
No 82
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=64.38 E-value=14 Score=29.46 Aligned_cols=31 Identities=13% Similarity=-0.051 Sum_probs=22.0
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEE
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAA 41 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~ 41 (220)
.+||+|+.-++-. .....+.|++.|.++.+.
T Consensus 29 ~mki~iv~~~~~~---~~~l~~~L~~~g~~v~~~ 59 (278)
T 1z0s_A 29 GMRAAVVYKTDGH---VKRIEEALKRLEVEVELF 59 (278)
T ss_dssp -CEEEEEESSSTT---HHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEEeCCcHH---HHHHHHHHHHCCCEEEEc
Confidence 3578887765543 666788899999987654
No 83
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=60.77 E-value=23 Score=27.65 Aligned_cols=42 Identities=24% Similarity=0.291 Sum_probs=29.8
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
.+||+||.-|-..... -+++..+-|+++.++|+-++++-.|.
T Consensus 66 ~~~DvvV~~~~~~~~~--l~~~~~~al~~~V~~GgG~vgiH~a~ 107 (252)
T 1t0b_A 66 DRCDVLVWWGHIAHDE--VKDEVVERVHRRVLEGMGLIVLHSGH 107 (252)
T ss_dssp HTCSEEEEECSSCGGG--SCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred hcCCEEEEecCCCCCc--CCHHHHHHHHHHHHcCCCEEEEcccC
Confidence 4799999853211122 36677778888889999999997764
No 84
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=59.05 E-value=12 Score=29.08 Aligned_cols=59 Identities=20% Similarity=0.389 Sum_probs=42.2
Q ss_pred eEEEEecC----CC---CchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCC
Q 027708 10 SVLLLCGD----YM---EDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEI 82 (220)
Q Consensus 10 kI~il~~~----g~---~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~ 82 (220)
||+|+-.. || ...|-..+.+.+..-|.+|+++|.+.+ +. ..+++++
T Consensus 2 kiai~n~gnni~~fkt~p~setiyl~~~~~~mgl~vd~is~k~~------------------iy---------~~~fd~v 54 (351)
T 1jg7_A 2 KIAIINMGNNVINFKTVPSSETIYLFKVISEMGLNVDIISLKNG------------------VY---------TKSFDEV 54 (351)
T ss_dssp CEEEEESSSCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEESSCC------------------SS---------EEEGGGS
T ss_pred ceEEEecCCccccceecCccceeeHHHHHHHcCCCeeEEEeccc------------------ee---------eeecccC
Confidence 68887642 22 246788888999999999999998643 11 2256677
Q ss_pred CCCCccEEEEcCC
Q 027708 83 DPTKYDGLVIPGG 95 (220)
Q Consensus 83 ~~~~~D~liipGG 95 (220)
++..||-++|...
T Consensus 55 d~n~ydr~~vvn~ 67 (351)
T 1jg7_A 55 DVNDYDRLIVVNS 67 (351)
T ss_dssp CGGGCSEEEEECC
T ss_pred CccccceEEEEec
Confidence 7788998888643
No 85
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=58.05 E-value=32 Score=23.72 Aligned_cols=84 Identities=19% Similarity=0.274 Sum_probs=46.0
Q ss_pred CeEEEEecCCCCc--hhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCC-
Q 027708 9 RSVLLLCGDYMED--YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPT- 85 (220)
Q Consensus 9 ~kI~il~~~g~~~--~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~- 85 (220)
+||.|+-+...-- .=.-.+.+.+...|.++++...... ..++ ..
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~-------------------------------~~~~--l~~ 48 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA-------------------------------SAEN--LAD 48 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB-------------------------------CCTT--TTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC-------------------------------CHhH--hcc
Confidence 4788877653322 2222344556677888777654321 0111 23
Q ss_pred CccEEEEcCCC-Cc--ccccCChHHHHHHHHHHh---CCCeEEEEehH
Q 027708 86 KYDGLVIPGGR-AP--EYLAMNDSVIDLVRKFSN---SGKTIASICHG 127 (220)
Q Consensus 86 ~~D~liipGG~-~~--~~~~~~~~l~~~l~~~~~---~g~~i~aic~G 127 (220)
++|.|++.... +. .. -.+.+.+|+.+... +++.++.+++|
T Consensus 49 ~~d~ii~g~pty~~~~G~--~p~~~~~fl~~l~~~~l~~k~~~vfg~G 94 (148)
T 3f6r_A 49 GYDAVLFGCSAWGMEDLE--MQDDFLSLFEEFDRIGLAGRKVAAFASG 94 (148)
T ss_dssp TCSEEEEEECEECSSSCE--ECHHHHHHHTTGGGTCCTTCEEEEEEEE
T ss_pred cCCEEEEEecccCCCCCC--CcHHHHHHHHHhhccCCCCCEEEEEEeC
Confidence 68988885421 11 11 23456677766543 57888888765
No 86
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=57.42 E-value=15 Score=26.88 Aligned_cols=83 Identities=13% Similarity=0.115 Sum_probs=47.7
Q ss_pred CeEEEEecCCCCchh--hHHHHHHHHh-CCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCC
Q 027708 9 RSVLLLCGDYMEDYE--AMVPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPT 85 (220)
Q Consensus 9 ~kI~il~~~g~~~~e--~~~~~~~l~~-ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~ 85 (220)
+||.|+.+....-.+ .-...+.+.. .|.+++++..... ..+++ .
T Consensus 5 ~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~-------------------------------~~~~l--~ 51 (188)
T 2ark_A 5 GKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDEA-------------------------------TKEDV--L 51 (188)
T ss_dssp EEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTTC-------------------------------CHHHH--H
T ss_pred CEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC-------------------------------CHHHH--H
Confidence 688888876433222 2234455555 6777766644210 01222 3
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHh------CCCeEEEEeh
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSN------SGKTIASICH 126 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~------~g~~i~aic~ 126 (220)
++|.||+..-.. ...-.+.+.+|+.+... ++|+++.+++
T Consensus 52 ~aD~ii~gsP~y--~g~~~~~lk~fld~~~~~~~~~l~gk~~~~~~t 96 (188)
T 2ark_A 52 WADGLAVGSPTN--MGLVSWKMKRFFDDVLGDLWGEIDGKIACAFSS 96 (188)
T ss_dssp HCSEEEEEEECB--TTBCCHHHHHHHHHTGGGTTTSCTTCEEEEEEE
T ss_pred hCCEEEEEeCcc--CCcCCHHHHHHHHHHhhhhHHHhCCCeEEEEEE
Confidence 689999854211 11235678888887664 6788877776
No 87
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=57.15 E-value=8.5 Score=27.62 Aligned_cols=38 Identities=8% Similarity=0.034 Sum_probs=22.0
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHH---hCCCeEEEEehH
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFS---NSGKTIASICHG 127 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~---~~g~~i~aic~G 127 (220)
++|.|++....... .-|. .+++.+.. -++|+++.++++
T Consensus 51 ~~d~ii~Gspty~g---~~p~-~~fl~~l~~~~l~gk~v~~fgs~ 91 (161)
T 3hly_A 51 SARGIVLGTPPSQP---SEAV-ATALSTIFAAAHNKQAIGLFDSY 91 (161)
T ss_dssp HCSEEEEECCBSSC---CHHH-HHHHHHHHHHCCTTSEEEEECCC
T ss_pred hCCEEEEEcCCcCC---chhH-HHHHHHHHhhhhCCCEEEEEEcC
Confidence 68999885432211 1222 44444443 378999988864
No 88
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=55.24 E-value=14 Score=29.57 Aligned_cols=41 Identities=20% Similarity=0.092 Sum_probs=24.9
Q ss_pred CCCCCCCCCeEEEEecCCC--Cc--hhhHHHHHHHHhCCCeEEEEcC
Q 027708 1 MANSKGGKRSVLLLCGDYM--ED--YEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 1 ~~~~~~~~~kI~il~~~g~--~~--~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
|++.+ ++|+.|++-+.- .. .-+......|..+|.++.+...
T Consensus 3 m~~~~--m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t 47 (304)
T 3s40_A 3 MTKTK--FEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHT 47 (304)
T ss_dssp --CCS--CSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEEC
T ss_pred CccCC--CCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEc
Confidence 54444 579998886632 11 2234566788888988877644
No 89
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=52.57 E-value=18 Score=27.93 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=25.3
Q ss_pred CCeEEEEecCCCCc---hhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYMED---YEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~~---~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+++|++++.+-.+. .-+.+..+.+...|+++.+....
T Consensus 5 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 44 (291)
T 3l49_A 5 GKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAG 44 (291)
T ss_dssp TCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 47999999853332 23456667777889998887543
No 90
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=52.04 E-value=24 Score=25.16 Aligned_cols=90 Identities=17% Similarity=0.124 Sum_probs=46.2
Q ss_pred CeEEEEecCCCCc--hhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 9 RSVLLLCGDYMED--YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 9 ~kI~il~~~g~~~--~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
++|.|+-+...-- .=.-.+.+.|...|.++.+......+ .++..+.++ .+
T Consensus 5 ~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~~--------------------------~~~~~~~~~--~~ 56 (159)
T 3fni_A 5 TSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAAV--------------------------DLQELRELV--GR 56 (159)
T ss_dssp CEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSSCC--------------------------CHHHHHHHH--HT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcCcC--------------------------CHHHHHHHH--Hh
Confidence 6788887654332 22334566777788887776542100 000001122 36
Q ss_pred ccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 87 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 87 ~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
+|.||+........+. ...+++.+....-.+|+++.++++
T Consensus 57 ~d~ii~Gspty~g~~p-~~~~l~~l~~~~~~~k~va~fgs~ 96 (159)
T 3fni_A 57 CTGLVIGMSPAASAAS-IQGALSTILGSVNEKQAVGIFETG 96 (159)
T ss_dssp EEEEEEECCBTTSHHH-HHHHHHHHHHHCCTTSEEEEECCS
T ss_pred CCEEEEEcCcCCCCcc-HHHHHHHHHhhcccCCEEEEEEcC
Confidence 9999985432211122 123333333333478999888864
No 91
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=52.04 E-value=13 Score=29.45 Aligned_cols=90 Identities=14% Similarity=0.141 Sum_probs=47.7
Q ss_pred CeEEEEecCCCC--chhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 9 RSVLLLCGDYME--DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 9 ~kI~il~~~g~~--~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
+||+|+.-++-. ...+....+.|.+.|+++.+...... .. ...+.... ..+.. ..+
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~-----------------~~-~~~~~~~~---~~~~~-~~~ 63 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAH-----------------EL-QLKNVPTG---TLAEI-GQQ 63 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHH-----------------HT-TCSSCCEE---CHHHH-HHH
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhh-----------------hc-cccccccc---chhhc-ccC
Confidence 689998865421 22355677888899998766432110 00 00000000 00111 135
Q ss_pred ccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 87 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 87 ~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
+|+||+.||.| .+.+.++.+...+.|+.+|=.|.
T Consensus 64 ~D~vi~~GGDG--------T~l~a~~~~~~~~~P~lGI~~Gt 97 (292)
T 2an1_A 64 ADLAVVVGGDG--------NMLGAARTLARYDINVIGINRGN 97 (292)
T ss_dssp CSEEEECSCHH--------HHHHHHHHHTTSSCEEEEBCSSS
T ss_pred CCEEEEEcCcH--------HHHHHHHHhhcCCCCEEEEECCC
Confidence 89999999854 44455555655678888885443
No 92
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=51.58 E-value=15 Score=26.99 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=24.0
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHH-------hCCCeEEEEehH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFS-------NSGKTIASICHG 127 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~-------~~g~~i~aic~G 127 (220)
.++|+||+..-... ..-.+.+..||.+.. -++|+++.++++
T Consensus 69 ~~aD~ii~gsP~y~--~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~ 116 (199)
T 2zki_A 69 RWADGFAIGSPTRY--GNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEA 116 (199)
T ss_dssp HHCSEEEEEEECBT--TBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEB
T ss_pred HhCCEEEEECCccc--cCccHHHHHHHHHhhhcccccccCCCEEEEEEeC
Confidence 36899988432111 123556777777652 257777766654
No 93
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=48.88 E-value=13 Score=30.24 Aligned_cols=35 Identities=14% Similarity=0.141 Sum_probs=22.4
Q ss_pred CeEEEEecCCCCc-hhhHHHHHHHHhCCCeEEEEcC
Q 027708 9 RSVLLLCGDYMED-YEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 9 ~kI~il~~~g~~~-~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
+|++|++-+.--. ..+......|+.+|.++.+...
T Consensus 30 ~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t 65 (332)
T 2bon_A 30 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVT 65 (332)
T ss_dssp CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEEC
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEe
Confidence 5888888653221 2344567788888988776543
No 94
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=47.32 E-value=20 Score=26.55 Aligned_cols=37 Identities=14% Similarity=-0.130 Sum_probs=22.6
Q ss_pred CCeEEEEecCCCC--chhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYME--DYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~--~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
++||+|+.+.... ..=.-.+.+.+...|.+++++...
T Consensus 6 mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 6 PVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 3689888875422 222233455666678888887654
No 95
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=44.68 E-value=28 Score=25.20 Aligned_cols=93 Identities=18% Similarity=0.179 Sum_probs=53.4
Q ss_pred CeEEEEecCCCCc---hhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCC--CC
Q 027708 9 RSVLLLCGDYMED---YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDE--ID 83 (220)
Q Consensus 9 ~kI~il~~~g~~~---~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~--~~ 83 (220)
.||+|+....... .-+.+..+.|.+.|.+++++...+. ++ +++....-... ..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGa------fE----------------iP~aa~~la~~~~~~ 70 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGA------LE----------------IPATISFALDGADNG 70 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSG------GG----------------HHHHHHHHHHHHHTT
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------HH----------------HHHHHHHHHhhcccc
Confidence 5899999875443 5677888999999977777755331 11 11111111110 01
Q ss_pred CCCccEEEEcCCC--C--ccc-ccCChHHHHHHHHHHhCCCeEEE
Q 027708 84 PTKYDGLVIPGGR--A--PEY-LAMNDSVIDLVRKFSNSGKTIAS 123 (220)
Q Consensus 84 ~~~~D~liipGG~--~--~~~-~~~~~~l~~~l~~~~~~g~~i~a 123 (220)
..+||+++..|-. | +.+ +..+.....+.+-..+.++||+.
T Consensus 71 ~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl~~vsl~~~vPV~~ 115 (157)
T 2i0f_A 71 GTEYDGFVALGTVIRGETYHFDIVSNESCRALTDLSVEESIAIGN 115 (157)
T ss_dssp CCCCSEEEEEEEEECCSSSTTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 2479999987742 2 211 22344555566666678888763
No 96
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=43.06 E-value=30 Score=25.15 Aligned_cols=102 Identities=18% Similarity=0.076 Sum_probs=49.8
Q ss_pred CeEEEEecCCCCc--hhhHHHHHHHHh-CCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCc--ccccCcCcCCCC
Q 027708 9 RSVLLLCGDYMED--YEAMVPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGH--NFALNATFDEID 83 (220)
Q Consensus 9 ~kI~il~~~g~~~--~e~~~~~~~l~~-ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~--~i~~~~~l~~~~ 83 (220)
+||.|+.+....- .=.-...+.+.. .|.+++++..... .+ + .+....+. ...+....++
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~--~~-~-----------~~~~~~~~~~~~~~~~~~~~-- 65 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPET--MP-P-----------QLFEKAGGKTQTAPVATPQE-- 65 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCCC--SC-H-----------HHHHHTTCCCCCSCBCCGGG--
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEcccc--Cc-h-----------hhhhhcccccccCchhhHHH--
Confidence 4888888763222 222334556666 7888888765431 00 0 00000110 0111111233
Q ss_pred CCCccEEEEcCCCCcccccCChHHHHHHHHHH-------hCCCeEEEEehHH
Q 027708 84 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFS-------NSGKTIASICHGQ 128 (220)
Q Consensus 84 ~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~-------~~g~~i~aic~G~ 128 (220)
..++|+||+..-... ..-.+.+..||.+.. -++|+++.++++.
T Consensus 66 l~~aD~ii~gsP~y~--~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g 115 (198)
T 3b6i_A 66 LADYDAIIFGTPTRF--GNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTG 115 (198)
T ss_dssp GGGCSEEEEEEEEET--TEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEES
T ss_pred HHHCCEEEEEeChhc--CCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCC
Confidence 347999999542111 122455666666543 3678877777653
No 97
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=42.79 E-value=23 Score=27.75 Aligned_cols=37 Identities=8% Similarity=-0.011 Sum_probs=26.5
Q ss_pred CCeEEEEecC---CCCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGD---YMEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~---g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
.++|++++.+ .|...-+.+..+.+...|+++.+....
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 41 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN 41 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECT
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 3689999974 444455667777888889998887653
No 98
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=40.52 E-value=31 Score=23.75 Aligned_cols=42 Identities=19% Similarity=0.346 Sum_probs=22.8
Q ss_pred CC-ccEEEEcCCCC-ccc--ccCChHHHHHHHHHH---hCCCeEEEEehHH
Q 027708 85 TK-YDGLVIPGGRA-PEY--LAMNDSVIDLVRKFS---NSGKTIASICHGQ 128 (220)
Q Consensus 85 ~~-~D~liipGG~~-~~~--~~~~~~l~~~l~~~~---~~g~~i~aic~G~ 128 (220)
.+ +|.|++..... ... + .+.+.+|+.+.. -.++.++.+|+|.
T Consensus 46 ~~~~d~ii~~~p~y~~g~~~~--p~~~~~fl~~l~~~~l~~k~~~v~~~g~ 94 (147)
T 1f4p_A 46 FEGFDLVLLGCSTWGDDSIEL--QDDFIPLFDSLEETGAQGRKVACFGCGD 94 (147)
T ss_dssp TTTCSEEEEEECEECSSSCEE--CTTTHHHHHTGGGSCCTTCEEEEEEEEC
T ss_pred cCcCCEEEEEeCCCCCCCcCC--ChhHHHHHHHHHhcccCCCEEEEEeecC
Confidence 36 89888854211 111 1 224455555443 3578888888753
No 99
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=40.10 E-value=17 Score=28.38 Aligned_cols=76 Identities=18% Similarity=0.275 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccEEEEcCCCCcccc
Q 027708 22 YEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYL 101 (220)
Q Consensus 22 ~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~liipGG~~~~~~ 101 (220)
.+.....+.|+..+++|++......+ .. +. .+.++ ..+||+||+.+... ..+
T Consensus 40 ~~~~~l~~aL~~~~~~v~~~~~~~~~---------------------~~--fp--~~~~~--L~~yDvIIl~~~~~-~~l 91 (256)
T 2gk3_A 40 EGATWLLECLRKGGVDIDYMPAHTVQ---------------------IA--FP--ESIDE--LNRYDVIVISDIGS-NTF 91 (256)
T ss_dssp ESCHHHHHHHHHTTCEEEEECHHHHH---------------------HC--CC--CSHHH--HHTCSEEEEESCCH-HHH
T ss_pred ccHHHHHHHHHhcCceEEEEecccch---------------------hh--CC--cChhH--HhcCCEEEEeCCch-hhc
Confidence 35667888999999998887432100 00 00 01122 24799999987432 111
Q ss_pred c----------CChHHHHHHHHHHhCCCeEEEEe
Q 027708 102 A----------MNDSVIDLVRKFSNSGKTIASIC 125 (220)
Q Consensus 102 ~----------~~~~l~~~l~~~~~~g~~i~aic 125 (220)
. ..+...+.|+++.++|.-+..+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~V~~GGgll~ig 125 (256)
T 2gk3_A 92 LLQNETFYQLKIKPNALESIKEYVKNGGGLLMIG 125 (256)
T ss_dssp HSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred ccccccccccccChHHHHHHHHHHHhCCEEEEEC
Confidence 1 11566788888888899888884
No 100
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=39.94 E-value=56 Score=29.05 Aligned_cols=62 Identities=21% Similarity=0.344 Sum_probs=44.2
Q ss_pred hhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccEEEEcCCCCccccc
Q 027708 23 EAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLA 102 (220)
Q Consensus 23 e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~liipGG~~~~~~~ 102 (220)
++...+..|...|..+++++++. + ...|++||+|+-. .
T Consensus 426 ~~~~~y~al~~~g~~vd~v~~~~-----------------------------------~--l~~y~lvv~P~~~-----~ 463 (645)
T 1kwg_A 426 LVYLFYSALRRLGLDVDVVPPGA-----------------------------------S--LRGYAFAVVPSLP-----I 463 (645)
T ss_dssp HHHHHHHHHHTTTCCEEEECTTS-----------------------------------C--CTTCSEEEESCCS-----S
T ss_pred HHHHHHHHHHHhCCCeeEECCCC-----------------------------------C--cccCCEEEEechh-----h
Confidence 46678889999999999986531 1 2379999999742 2
Q ss_pred CChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 103 MNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 103 ~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
-++.+.+.|++ +-|..|++-.+|.
T Consensus 464 ~~~~~~~~L~~--~GG~lv~~~~sg~ 487 (645)
T 1kwg_A 464 VREEALEAFRE--AEGPVLFGPRSGS 487 (645)
T ss_dssp CCHHHHHHHHT--CSSCEEECTTTTC
T ss_pred cCHHHHHHHHh--CCCEEEEeccCCc
Confidence 36678888877 5566676666654
No 101
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=38.94 E-value=44 Score=24.41 Aligned_cols=39 Identities=8% Similarity=0.065 Sum_probs=32.5
Q ss_pred CCCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 83 DPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 83 ~~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
+..+-|.++|.+-. .+|+..++..++..++|.++.+||+
T Consensus 74 ~i~~~D~vii~S~S-----g~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPD-----TERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESC-----SCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCC-----CCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 34578888887633 3688999999999999999999997
No 102
>3dmn_A Putative DNA helicase; APC89291.2, lactobacillus plantarum WCFS1, STR genomics, PSI-2, midwest center for structural genomics; HET: MSE; 1.66A {Lactobacillus plantarum}
Probab=38.44 E-value=64 Score=23.17 Aligned_cols=63 Identities=13% Similarity=0.109 Sum_probs=34.5
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
..|+||...+. +...+.+.|...|..+..+..... . ...++.+.+-.....+ +||
T Consensus 62 ~~iAVL~r~~~---~~~~l~~~L~~~gi~~~~l~~~~~-----------------~--~~~~v~v~t~~~~KGl---Ef~ 116 (174)
T 3dmn_A 62 DTTAIIGKSLA---ECEALTKALKARGEQVTLIQTENQ-----------------R--LAPGVIVVPSFLAKGL---EFD 116 (174)
T ss_dssp CCEEEEESSHH---HHHHHHHHHHTTTCCEEECSSCC------------------C--CCSSEEEEEGGGCTTC---CEE
T ss_pred CcEEEEecCHH---HHHHHHHHHHHcCCcceeeccccc-----------------c--cCCCeEEEEccccCCc---CCC
Confidence 45777766542 344556677777766655543221 0 1123334333334443 799
Q ss_pred EEEEcCCC
Q 027708 89 GLVIPGGR 96 (220)
Q Consensus 89 ~liipGG~ 96 (220)
.|++++-.
T Consensus 117 ~V~~~~~~ 124 (174)
T 3dmn_A 117 AVIVWNAN 124 (174)
T ss_dssp EEEEETCB
T ss_pred EEEEecCC
Confidence 99999853
No 103
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=36.89 E-value=29 Score=25.07 Aligned_cols=42 Identities=17% Similarity=0.048 Sum_probs=28.5
Q ss_pred CCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 84 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 84 ~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
..+||.|++...... ..-.+.+..||.+..-+||.++.+|+.
T Consensus 85 l~~yD~iilg~Pvy~--g~~~~~~~~fl~~~~l~gk~v~~f~t~ 126 (171)
T 4ici_A 85 IGTYDVVFIGYPIWW--DLAPRIINTFIEGHSLKGKTVVPFATS 126 (171)
T ss_dssp GGGCSEEEEEEECBT--TBCCHHHHHHHHHSCCTTSEEEEEEEC
T ss_pred HhHCCEEEEeccccc--CCchHHHHHHHHHcCCCcCEEEEEEec
Confidence 358999999432211 123567889998876678888887764
No 104
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=36.76 E-value=46 Score=24.46 Aligned_cols=42 Identities=7% Similarity=0.084 Sum_probs=28.0
Q ss_pred CCCCCCCCCeEEEEecCCCCchhhHHHHHHHHhCC--CeEEEEcCCC
Q 027708 1 MANSKGGKRSVLLLCGDYMEDYEAMVPFQALLAFG--VSVDAACPGK 45 (220)
Q Consensus 1 ~~~~~~~~~kI~il~~~g~~~~e~~~~~~~l~~ag--~~v~~~s~~~ 45 (220)
|+.|. ++|+|+.-...+..-.-...++|+..| +++.++|..+
T Consensus 8 ~~~m~---~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR 51 (174)
T 3kuu_A 8 AYAAG---VKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHR 51 (174)
T ss_dssp SSCCC---CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred cccCC---CcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccC
Confidence 45565 579998876555444556667888777 5667776654
No 105
>3i9v_6 NADH-quinone oxidoreductase subunit 6; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_6* 2fug_6* 3iam_6* 3ias_6* 3m9s_6*
Probab=36.52 E-value=28 Score=25.80 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=29.5
Q ss_pred CCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 84 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 84 ~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
+.+.|+++|-|... ......++.+.++..+-|.|.|+++=+
T Consensus 72 PrqaDiliVeG~Vt----~~m~~~l~~~~e~~p~pk~VIAvGsCA 112 (181)
T 3i9v_6 72 PRQADVMIVAGRLS----KKMAPVMRRVWEQMPDPKWVISMGACA 112 (181)
T ss_dssp --CCCCEEEESCCB----TTTHHHHHHHHHSSCSSCCEEEEHHHH
T ss_pred CCCceEEEEeccCC----cccHHHHHHHHHHcCCCceEEEeeccc
Confidence 46799999998643 234566777888888889999887644
No 106
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=36.50 E-value=58 Score=23.32 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=29.9
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
+=|++|+.+..| .++.+.+.++.+.++|.++.+++.-
T Consensus 110 ~~Dvvi~iS~sG-----~t~~~~~~~~~ak~~g~~vi~iT~~ 146 (188)
T 1tk9_A 110 EKDVLIGISTSG-----KSPNVLEALKKAKELNMLCLGLSGK 146 (188)
T ss_dssp TTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 568888877544 5788999999999999999999864
No 107
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=35.55 E-value=22 Score=27.97 Aligned_cols=87 Identities=13% Similarity=0.083 Sum_probs=48.4
Q ss_pred CCeEEEEecCC---CCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCC
Q 027708 8 KRSVLLLCGDY---MEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDP 84 (220)
Q Consensus 8 ~~kI~il~~~g---~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~ 84 (220)
+++|++++.+- |...-+.+..+.++..|+++.+......+ -.. . ..++.+-.
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~-----------------~~~-----~---~~i~~~~~ 57 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDI-----------------PNQ-----L---SQIENMVT 57 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCH-----------------HHH-----H---HHHHHHHH
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCH-----------------HHH-----H---HHHHHHHH
Confidence 47899999753 22334455667777889988777543210 000 0 01111111
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
..+|+||+.+.. .......+++..+.|.|++.+..
T Consensus 58 ~~vdgiIi~~~~-------~~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 58 KGVKVLVIASID-------GTTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp HTCSEEEECCSS-------GGGGHHHHHHHHHTTCEEEEESS
T ss_pred cCCCEEEEEcCC-------chhHHHHHHHHHHCCCCEEEECC
Confidence 368999986532 12233455666677888877653
No 108
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=35.21 E-value=64 Score=23.48 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=30.6
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
.+-|++|+.+..+ ..+.+.+.++.+.++|.++.+|+.-
T Consensus 112 ~~~DvvI~iS~SG-----~t~~~i~~~~~ak~~g~~vI~IT~~ 149 (199)
T 1x92_A 112 QPGDVLLAISTSG-----NSANVIQAIQAAHDREMLVVALTGR 149 (199)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3568888877544 5788999999999999999998763
No 109
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=35.19 E-value=64 Score=23.34 Aligned_cols=36 Identities=14% Similarity=0.110 Sum_probs=29.0
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
+=|++|+.+..| ..+.+.+.++.+.++|.++.+|+.
T Consensus 116 ~~d~vI~iS~SG-----~t~~~~~~~~~ak~~g~~vI~IT~ 151 (198)
T 2xbl_A 116 EGDVLIGYSTSG-----KSPNILAAFREAKAKGMTCVGFTG 151 (198)
T ss_dssp TTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCeEEEEEC
Confidence 567888876544 467889999999999999999985
No 110
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=35.11 E-value=28 Score=24.81 Aligned_cols=41 Identities=15% Similarity=0.176 Sum_probs=27.7
Q ss_pred CCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 84 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 84 ~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
..+||.|++....... .-.+.+.+||.+..-+||+++.+|+
T Consensus 76 l~~yd~iilG~P~~~g--~~~~~~~~fl~~~~l~gk~v~~f~t 116 (162)
T 3klb_A 76 PEKYEVLFVGFPVWWY--IAPTIINTFLESYDFAGKIVVPFAT 116 (162)
T ss_dssp GGGCSEEEEEEECBTT--BCCHHHHHHHHTSCCTTCEEEEEEE
T ss_pred hhhCCEEEEEcccccC--CCCHHHHHHHHhcCCCCCEEEEEEE
Confidence 3589999994321111 2356788898876557888888875
No 111
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=34.13 E-value=68 Score=23.20 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=30.5
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
.+-|++|+.+..| ..+.+.+.++.+.++|.++.+|+.-
T Consensus 108 ~~~DvvI~iS~SG-----~t~~~i~~~~~ak~~g~~vI~IT~~ 145 (196)
T 2yva_A 108 HAGDVLLAISTRG-----NSRDIVKAVEAAVTRDMTIVALTGY 145 (196)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3568888877544 5788999999999999999999863
No 112
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=33.65 E-value=24 Score=25.50 Aligned_cols=90 Identities=10% Similarity=0.068 Sum_probs=50.5
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCC--eEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGV--SVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~--~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
.||+|+........=+.+..+.|.+.|. ++.++... ++.-+++....-.. ..+
T Consensus 3 ~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VP----------------------GafEiP~aak~la~---~~~ 57 (156)
T 2b99_A 3 KKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVP----------------------GIKDLPVACKKLLE---EEG 57 (156)
T ss_dssp CEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEES----------------------SGGGHHHHHHHHHH---HSC
T ss_pred cEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECC----------------------cHHHHHHHHHHHHh---cCC
Confidence 5899999765545566888999998874 33223222 12222222221111 137
Q ss_pred ccEEEEcCCCCc--cc-ccCChHHHHHHHHHHhCCCeEEE
Q 027708 87 YDGLVIPGGRAP--EY-LAMNDSVIDLVRKFSNSGKTIAS 123 (220)
Q Consensus 87 ~D~liipGG~~~--~~-~~~~~~l~~~l~~~~~~g~~i~a 123 (220)
||+||..|-.|. .+ +..+.....+.+-....++||..
T Consensus 58 yDavIaLG~VG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~ 97 (156)
T 2b99_A 58 CDIVMALGMPGKAEKDKVCAHEASLGLMLAQLMTNKHIIE 97 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEEecccCCcchhHHHHHHHHHHHHHHHhhhCCCEEE
Confidence 999999886532 11 22344444555555567787764
No 113
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=33.41 E-value=66 Score=25.42 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=21.0
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEE
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIA 122 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~ 122 (220)
++.|+|+|+-. +....+++.+..++|+.|.
T Consensus 64 ~~~D~V~i~tp--------~~~h~~~~~~al~~G~~v~ 93 (319)
T 1tlt_A 64 ASCDAVFVHSS--------TASHFDVVSTLLNAGVHVC 93 (319)
T ss_dssp TTCSEEEECSC--------TTHHHHHHHHHHHTTCEEE
T ss_pred cCCCEEEEeCC--------chhHHHHHHHHHHcCCeEE
Confidence 47999999753 2244566677778898776
No 114
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=33.39 E-value=46 Score=23.92 Aligned_cols=91 Identities=9% Similarity=0.007 Sum_probs=52.1
Q ss_pred CCeEEEEecCCCCc---hhhHHHHHHHHhCCC---eEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCC
Q 027708 8 KRSVLLLCGDYMED---YEAMVPFQALLAFGV---SVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDE 81 (220)
Q Consensus 8 ~~kI~il~~~g~~~---~e~~~~~~~l~~ag~---~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~ 81 (220)
+.||+|+....... .=+.+..+.|.+.|. +++++...+ +.-+++....-..
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPG----------------------afEiP~aa~~la~- 68 (154)
T 1hqk_A 12 GLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPG----------------------SWEIPVAAGELAR- 68 (154)
T ss_dssp TCCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESS----------------------GGGHHHHHHHHHT-
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCc----------------------HHHHHHHHHHHHh-
Confidence 46899999875543 556788899998884 345554322 1112222221111
Q ss_pred CCCCCccEEEEcCCC--C--cc-cccCChHHHHHHHHHHhCCCeEEE
Q 027708 82 IDPTKYDGLVIPGGR--A--PE-YLAMNDSVIDLVRKFSNSGKTIAS 123 (220)
Q Consensus 82 ~~~~~~D~liipGG~--~--~~-~~~~~~~l~~~l~~~~~~g~~i~a 123 (220)
..+||+++..|-. | +. .+..+.....+.+-....++||..
T Consensus 69 --~~~yDavIalG~VIrG~T~Hfd~Va~~vs~gl~~v~l~~~vPV~~ 113 (154)
T 1hqk_A 69 --KEDIDAVIAIGVLIRGATPHFDYIASEVSKGLANLSLELRKPITF 113 (154)
T ss_dssp --CTTCCEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred --cCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 2479999987742 2 21 123344555566666667888764
No 115
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=33.32 E-value=38 Score=26.41 Aligned_cols=113 Identities=10% Similarity=-0.035 Sum_probs=54.5
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCcc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYD 88 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D 88 (220)
+||+|+=..|..... ....|...|++|.+...+....+ .... .|... . +..+. ..+.|
T Consensus 12 m~I~iIG~tG~mG~~---la~~l~~~g~~V~~~~r~~~~~~--------------~~~~-~g~~~--~-~~~~~-~~~aD 69 (286)
T 3c24_A 12 KTVAILGAGGKMGAR---ITRKIHDSAHHLAAIEIAPEGRD--------------RLQG-MGIPL--T-DGDGW-IDEAD 69 (286)
T ss_dssp CEEEEETTTSHHHHH---HHHHHHHSSSEEEEECCSHHHHH--------------HHHH-TTCCC--C-CSSGG-GGTCS
T ss_pred CEEEEECCCCHHHHH---HHHHHHhCCCEEEEEECCHHHHH--------------HHHh-cCCCc--C-CHHHH-hcCCC
Confidence 689988554433222 23456778998877655321000 1111 23222 1 22221 24689
Q ss_pred EEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEe-cCCCC
Q 027708 89 GLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCT-AYPPV 148 (220)
Q Consensus 89 ~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T-~~~~~ 148 (220)
+||++-... . -..+.+-+....+.++.|..+++|.-+-....+..|.++. .||..
T Consensus 70 vVi~av~~~--~---~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~~~~~~~~v~~~P~~ 125 (286)
T 3c24_A 70 VVVLALPDN--I---IEKVAEDIVPRVRPGTIVLILDAAAPYAGVMPERADITYFIGHPCH 125 (286)
T ss_dssp EEEECSCHH--H---HHHHHHHHGGGSCTTCEEEESCSHHHHHTCSCCCTTSEEEEEEECC
T ss_pred EEEEcCCch--H---HHHHHHHHHHhCCCCCEEEECCCCchhHHHHhhhCCCeEEecCCCC
Confidence 999864211 1 1233333333345677888766665332112234444444 55543
No 116
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=32.79 E-value=46 Score=26.41 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=24.4
Q ss_pred CeEEEEecCCCCchh--hHHHHHHHHhCCCeEEEEcCCC
Q 027708 9 RSVLLLCGDYMEDYE--AMVPFQALLAFGVSVDAACPGK 45 (220)
Q Consensus 9 ~kI~il~~~g~~~~e--~~~~~~~l~~ag~~v~~~s~~~ 45 (220)
+||+++.. +....+ .......|.+.|++|.+++...
T Consensus 7 mkIl~~~~-~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 44 (364)
T 1f0k_A 7 KRLMVMAG-GTGGHVFPGLAVAHHLMAQGWQVRWLGTAD 44 (364)
T ss_dssp CEEEEECC-SSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred cEEEEEeC-CCccchhHHHHHHHHHHHcCCEEEEEecCC
Confidence 69998863 332222 2356677888899999998754
No 117
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=32.43 E-value=40 Score=24.32 Aligned_cols=90 Identities=18% Similarity=0.165 Sum_probs=51.5
Q ss_pred CCeEEEEecCCCCc---hhhHHHHHHHHhCC-C---eEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcC
Q 027708 8 KRSVLLLCGDYMED---YEAMVPFQALLAFG-V---SVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFD 80 (220)
Q Consensus 8 ~~kI~il~~~g~~~---~e~~~~~~~l~~ag-~---~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~ 80 (220)
..||+|+....... .-+.+..+.|.+.| . +++++...+ +.-+++....-..
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPG----------------------afEiP~aa~~la~ 69 (156)
T 3nq4_A 12 DARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPG----------------------AYELPLATEALAK 69 (156)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESS----------------------TTTHHHHHHHHHH
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCc----------------------HHHHHHHHHHHHh
Confidence 47899999875543 55678889999888 3 566654432 1112222221111
Q ss_pred CCCCCCccEEEEcCCC--C--ccc-ccCChHHHHHHHHHHhCCCeEE
Q 027708 81 EIDPTKYDGLVIPGGR--A--PEY-LAMNDSVIDLVRKFSNSGKTIA 122 (220)
Q Consensus 81 ~~~~~~~D~liipGG~--~--~~~-~~~~~~l~~~l~~~~~~g~~i~ 122 (220)
..+||+++..|-. | +.+ +..+.....+.+-..+.++||+
T Consensus 70 ---~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~ 113 (156)
T 3nq4_A 70 ---SGKYDAVVALGTVIRGGTAHFEYVAGGASNGLASVAQDSGVPVA 113 (156)
T ss_dssp ---HCSCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred ---cCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhccCCCEE
Confidence 1369999988742 2 221 2234444555555556788865
No 118
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=32.25 E-value=25 Score=27.11 Aligned_cols=35 Identities=9% Similarity=-0.069 Sum_probs=22.6
Q ss_pred CeEEEEecCCCC---chhhHHHHHHHHhCCCeEEEEcC
Q 027708 9 RSVLLLCGDYME---DYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 9 ~kI~il~~~g~~---~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
++|++++.+--+ ..-+.+..+.+...|+++.+...
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 40 (290)
T 2fn9_A 3 GKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDS 40 (290)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 689999875322 22344556667778998876644
No 119
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=31.92 E-value=1e+02 Score=22.50 Aligned_cols=82 Identities=11% Similarity=0.064 Sum_probs=40.2
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCc-CCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATF-DEIDPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l-~~~~~~~ 86 (220)
.++|++.+.-+ .+.+...+.+.+...|..|.+=-...... ...+..+.....-..+..|+. .|.... ...+..+
T Consensus 41 a~~I~~y~~~~-~Evdt~~li~~~~~~gk~v~lP~~~~~~~---~m~f~~~~~~~~L~~~~~gi~-EP~~~~~~~~~~~~ 115 (187)
T 1ydm_A 41 AGTIAVTISRG-LEIPTRPVIEQAWEEGKQVCIPKCHPDTK---KMQFRTYQTDDQLETVYAGLL-EPVIEKTKEVNPSQ 115 (187)
T ss_dssp CSEEECCCCCT-TSCCCHHHHHHHHHTTCEEEEECC---CC---CCCEEECCCCTTHHHHHTTSC-CCC--CCCCCCGGG
T ss_pred CCEEEEECCCC-CCCCHHHHHHHHHHCCCEEEEeEEecCCC---cEEEEEeCCCCccCcCCCCCC-CCCCcccccCCccC
Confidence 35777776544 36667777778888888765432210000 111222221111233445542 332211 1223357
Q ss_pred ccEEEEcC
Q 027708 87 YDGLVIPG 94 (220)
Q Consensus 87 ~D~liipG 94 (220)
.|++||||
T Consensus 116 iDlvivP~ 123 (187)
T 1ydm_A 116 IDLMIVPG 123 (187)
T ss_dssp CCEEECCC
T ss_pred CCEEEeCC
Confidence 89999997
No 120
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=31.84 E-value=37 Score=26.42 Aligned_cols=97 Identities=15% Similarity=0.098 Sum_probs=50.2
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+++|+|-=.. .......+.|++.|+++..+..- ++. +..... ..+..+.++ .+|
T Consensus 14 g~~IlvTRp~----~~a~~l~~~L~~~G~~~~~~P~i---------~i~-------~~~~~~----~l~~~l~~l--~~~ 67 (269)
T 3re1_A 14 AWRLLLTRPA----EESAALARVLADAGIFSSSLPLL---------ETE-------PLPLTP----AQRSIIFEL--LNY 67 (269)
T ss_dssp CCEEEECSCH----HHHHHHHHHHHTTTCEEEECCCC---------EEE-------ECCCHH----HHHHHHHTG--GGS
T ss_pred CCEEEEeCCh----HHHHHHHHHHHHCCCCEEEcCCE---------EEe-------cCCCcH----HHHHHHHhc--cCC
Confidence 5777654332 24566788999999987665221 010 000000 000112222 479
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHh--CCCeEEEEehHHH-HHHhCcc
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSN--SGKTIASICHGQL-ILAAADV 136 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~--~g~~i~aic~G~~-~La~agl 136 (220)
|+||+.+..+... +.+.+++... +...+++|+.++. .|.+.|+
T Consensus 68 d~vifTS~naV~~------~~~~l~~~~~~~~~~~i~aVG~~Ta~aL~~~G~ 113 (269)
T 3re1_A 68 SAVIVVSKPAARL------AIELIDEVWPQPPMQPWFSVGSATGQILLDYGL 113 (269)
T ss_dssp SEEEECSHHHHHH------HHHHHHHHCSSCCCSCEEESSHHHHHHHHHTTC
T ss_pred CEEEEECHHHHHH------HHHHHHHhCCCcccCEEEEECHHHHHHHHHcCC
Confidence 9999987655432 2233333211 1367888887764 5666664
No 121
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=31.59 E-value=82 Score=22.52 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=29.8
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
.+-|++|+....+ ..+.+.+.++.+.++|.++.+|+.-
T Consensus 78 ~~~d~vI~iS~sG-----~t~~~~~~~~~ak~~g~~vi~IT~~ 115 (186)
T 1m3s_A 78 AEGDLVIIGSGSG-----ETKSLIHTAAKAKSLHGIVAALTIN 115 (186)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEEcCCC-----CcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3567888877544 4578899999999999999999853
No 122
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=31.18 E-value=1.3e+02 Score=20.58 Aligned_cols=72 Identities=11% Similarity=0.056 Sum_probs=36.4
Q ss_pred CCccEEEEcCCCC-ccccc-CChHHHHHHHHH--HhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEe
Q 027708 85 TKYDGLVIPGGRA-PEYLA-MNDSVIDLVRKF--SNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWI 160 (220)
Q Consensus 85 ~~~D~liipGG~~-~~~~~-~~~~l~~~l~~~--~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~ 160 (220)
.++|.|++..... ...+. .-..+.++++.. .-+++.++.++.|---- +.-+.+-....+.+++.|...+
T Consensus 45 ~~~d~vi~g~pt~g~g~~p~~~~~f~~~l~~~~~~l~~~~~avfg~G~~~y-------~~~~~a~~~l~~~l~~~G~~~~ 117 (147)
T 2hna_A 45 PASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREY-------DTFCGAIDKLEAELKNSGAKQT 117 (147)
T ss_dssp CSEEEEEEECCTTTTCCTTSSCHHHHHHHHHHCCCTTEEEEEEESCCHHHH-------SCSSSCTTHHHHHHHHHTCEEC
T ss_pred ccCCeEEEEECccCCCCCChhHHHHHHHHHhhccccCCCEEEEEecccCCH-------HHHHHHHHHHHHHHHHcCCeEe
Confidence 4689888854322 22222 235666777653 23467777777664311 1001111223455666677766
Q ss_pred cCC
Q 027708 161 EPE 163 (220)
Q Consensus 161 ~~~ 163 (220)
.+.
T Consensus 118 ~~~ 120 (147)
T 2hna_A 118 GET 120 (147)
T ss_dssp SSC
T ss_pred eee
Confidence 554
No 123
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=31.06 E-value=69 Score=23.42 Aligned_cols=37 Identities=11% Similarity=-0.042 Sum_probs=30.1
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
.|||.+-+.-+..........+.|++.|++|.++-.+
T Consensus 5 ~k~IllgvTGs~aa~k~~~ll~~L~~~g~~V~vv~T~ 41 (175)
T 3qjg_A 5 GENVLICLCGSVNSINISHYIIELKSKFDEVNVIAST 41 (175)
T ss_dssp CCEEEEEECSSGGGGGHHHHHHHHTTTCSEEEEEECT
T ss_pred CCEEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3799999988877777788888999999999877543
No 124
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=31.05 E-value=1.2e+02 Score=24.85 Aligned_cols=105 Identities=10% Similarity=-0.046 Sum_probs=62.5
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEE-EEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVD-AACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTK 86 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~-~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~ 86 (220)
.++++|+..+++.....-....+++...+++. ++..+. ...+-+.+... ...+....+++++-...
T Consensus 7 ~~~~vi~~~g~~~~~~aKta~gl~r~~~~~iVgvid~~~------------~G~d~ge~~g~-~~gipi~~~l~~al~~~ 73 (349)
T 2obn_A 7 NQRVAILLHEGTTGTIGKTGLALLRYSEAPIVAVIDRNC------------AGQSLREITGI-YRYVPIVKSVEAALEYK 73 (349)
T ss_dssp CCCEEEECTTTSSSSSCHHHHHHHHHCCSCEEEEECGGG------------TTSCHHHHHCC-CSCCCEESSHHHHGGGC
T ss_pred CCcEEEEeCCCCCcHHHHHhHHhhhcCCCcEEEEEeCCC------------CCCcHHHhcCC-cCCCCccCCHHHHHhCC
Confidence 47899999999998888888888988777652 222211 00000112111 11222223344332236
Q ss_pred ccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 87 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 87 ~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
+|++++.-.+.-.. -.+...+.|.++.+.|.-|++-|+-
T Consensus 74 ~d~lvig~a~~gG~--l~~~~~~~i~~Al~~G~~Vvsglh~ 112 (349)
T 2obn_A 74 PQVLVIGIAPKGGG--IPDDYWIELKTALQAGMSLVNGLHT 112 (349)
T ss_dssp CSEEEECCCCCCC---SCGGGHHHHHHHHHTTCEEEECSSS
T ss_pred CCEEEEEecCCCCC--CCHHHHHHHHHHHHcCCcEEeCccc
Confidence 89999953221111 2347778889999999999999985
No 125
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=30.85 E-value=46 Score=23.96 Aligned_cols=91 Identities=18% Similarity=0.207 Sum_probs=52.1
Q ss_pred CCeEEEEecCCCCc---hhhHHHHHHHHhCCC---eEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCC
Q 027708 8 KRSVLLLCGDYMED---YEAMVPFQALLAFGV---SVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDE 81 (220)
Q Consensus 8 ~~kI~il~~~g~~~---~e~~~~~~~l~~ag~---~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~ 81 (220)
..||+|+....... .=+.+..+.|.+.|. +++++...+ +.-+++....-..
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPG----------------------afEiP~aa~~la~- 68 (154)
T 1rvv_A 12 GLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPG----------------------AFEIPFAAKKMAE- 68 (154)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESS----------------------GGGHHHHHHHHHH-
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCc----------------------HHHHHHHHHHHHh-
Confidence 46899999875543 556788899998884 345553322 1112222221111
Q ss_pred CCCCCccEEEEcCCC--C--cc-cccCChHHHHHHHHHHhCCCeEEE
Q 027708 82 IDPTKYDGLVIPGGR--A--PE-YLAMNDSVIDLVRKFSNSGKTIAS 123 (220)
Q Consensus 82 ~~~~~~D~liipGG~--~--~~-~~~~~~~l~~~l~~~~~~g~~i~a 123 (220)
..+||+++..|-. | +. .+..+.....+.+-....++||..
T Consensus 69 --~~~yDavIaLG~VIrG~T~Hfd~V~~~vs~Gl~~v~l~~~vPV~~ 113 (154)
T 1rvv_A 69 --TKKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIF 113 (154)
T ss_dssp --TSCCSEEEEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred --cCCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhhCCCEEE
Confidence 2479999987742 2 22 123344555566666677888764
No 126
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=30.80 E-value=44 Score=26.61 Aligned_cols=39 Identities=21% Similarity=0.145 Sum_probs=25.2
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
.++|+||++==. ...+.+.+.|+.....+..|.++++|.
T Consensus 70 ~~~DlVilavK~-----~~~~~~l~~l~~~l~~~t~Iv~~~nGi 108 (320)
T 3i83_A 70 TKPDCTLLCIKV-----VEGADRVGLLRDAVAPDTGIVLISNGI 108 (320)
T ss_dssp SCCSEEEECCCC-----CTTCCHHHHHTTSCCTTCEEEEECSSS
T ss_pred CCCCEEEEecCC-----CChHHHHHHHHhhcCCCCEEEEeCCCC
Confidence 379999995311 122345566666666678888888875
No 127
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=30.79 E-value=44 Score=24.24 Aligned_cols=89 Identities=11% Similarity=0.013 Sum_probs=50.8
Q ss_pred CCeEEEEecCCCCc---hhhHHHHHHHHhCCC-eEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCC
Q 027708 8 KRSVLLLCGDYMED---YEAMVPFQALLAFGV-SVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEID 83 (220)
Q Consensus 8 ~~kI~il~~~g~~~---~e~~~~~~~l~~ag~-~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~ 83 (220)
+.||+|+....... .=+.+..+.|.+.|. +++++...+ +.-+++....-..
T Consensus 17 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPG----------------------afEiP~aak~la~--- 71 (160)
T 2c92_A 17 GVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLG----------------------AIEIPVVAQELAR--- 71 (160)
T ss_dssp TCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESS----------------------GGGHHHHHHHHHT---
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCc----------------------HHHHHHHHHHHHh---
Confidence 46899999875443 556778899998886 444443322 1112222211111
Q ss_pred CCCccEEEEcCCC--C--cc-cccCChHHHHHHHHHHhCCCeEEE
Q 027708 84 PTKYDGLVIPGGR--A--PE-YLAMNDSVIDLVRKFSNSGKTIAS 123 (220)
Q Consensus 84 ~~~~D~liipGG~--~--~~-~~~~~~~l~~~l~~~~~~g~~i~a 123 (220)
.||+++..|-. | +. .+..+.....+.+-....++||..
T Consensus 72 --~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~ 114 (160)
T 2c92_A 72 --NHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIAN 114 (160)
T ss_dssp --SCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred --cCCEEEEEeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 49999987742 2 21 123344555566666677888764
No 128
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=30.75 E-value=91 Score=22.98 Aligned_cols=38 Identities=11% Similarity=0.191 Sum_probs=30.7
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
.+-|++|+.+..| ..+.+++.++.+.++|.++.+++..
T Consensus 113 ~~~Dvvi~iS~SG-----~t~~~~~~~~~ak~~g~~vi~iT~~ 150 (201)
T 3trj_A 113 NEDDILLVITTSG-----DSENILSAVEEAHDLEMKVIALTGG 150 (201)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCcEEEEECC
Confidence 3578888877544 5788999999999999999999853
No 129
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=30.59 E-value=66 Score=24.37 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=31.7
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
.+=|++|+....+ .++.+++.++.+.++|.++.+|+.-.
T Consensus 107 ~~~Dv~I~iS~SG-----~t~~~i~~~~~Ak~~G~~vI~IT~~~ 145 (243)
T 3cvj_A 107 TNKDVIMIISNSG-----RNTVPVEMAIESRNIGAKVIAMTSMK 145 (243)
T ss_dssp CTTCEEEEECSSC-----CSHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4568888887544 57889999999999999999998654
No 130
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=30.57 E-value=32 Score=26.52 Aligned_cols=35 Identities=11% Similarity=-0.023 Sum_probs=22.0
Q ss_pred CCeEEEEecCC-CC---chhhHHHHHHHHhC-CCeEEEEc
Q 027708 8 KRSVLLLCGDY-ME---DYEAMVPFQALLAF-GVSVDAAC 42 (220)
Q Consensus 8 ~~kI~il~~~g-~~---~~e~~~~~~~l~~a-g~~v~~~s 42 (220)
+++|++++.+. .+ ..-+.+..+.+... |+.+.+..
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~ 47 (304)
T 3gbv_A 8 KYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANI 47 (304)
T ss_dssp CEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEE
T ss_pred cceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 57899998764 22 22344555666667 78776653
No 131
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=30.55 E-value=67 Score=23.78 Aligned_cols=37 Identities=14% Similarity=0.114 Sum_probs=29.4
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
+-|++|+....+ .++.+++.++.+.++|.++.+|+.-
T Consensus 131 ~~DvvI~iS~SG-----~t~~~i~~~~~ak~~G~~vIaIT~~ 167 (212)
T 2i2w_A 131 EGDVLLGISTSG-----NSANVIKAIAAAREKGMKVITLTGK 167 (212)
T ss_dssp TTCEEEEECSSS-----CCHHHHHHHHHHHHHTCEEEEEEET
T ss_pred CCCEEEEEECCC-----CCHHHHHHHHHHHHCCCeEEEEECC
Confidence 567888776544 4688999999999999999999863
No 132
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=30.31 E-value=94 Score=20.45 Aligned_cols=31 Identities=16% Similarity=-0.090 Sum_probs=19.1
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHh-CCCeEEEEc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLA-FGVSVDAAC 42 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~-ag~~v~~~s 42 (220)
++|.|+=-+ ..........|.. .|+++..++
T Consensus 5 ~~ilivdd~---~~~~~~l~~~L~~~~~~~v~~~~ 36 (140)
T 3lua_A 5 GTVLLIDYF---EYEREKTKIIFDNIGEYDFIEVE 36 (140)
T ss_dssp CEEEEECSC---HHHHHHHHHHHHHHCCCEEEEEC
T ss_pred CeEEEEeCC---HHHHHHHHHHHHhccCccEEEEC
Confidence 466555322 3345566778888 899887554
No 133
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=30.14 E-value=73 Score=23.35 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=29.8
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
.+-|++|+.+..+ ..+.+++.++.+.++|.++.+|..
T Consensus 88 ~~~DvvI~iS~SG-----~t~~~i~~~~~ak~~g~~vI~IT~ 124 (200)
T 1vim_A 88 TDQDVLVGISGSG-----ETTSVVNISKKAKDIGSKLVAVTG 124 (200)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCEEEEEeCCC-----CcHHHHHHHHHHHHCCCeEEEEEC
Confidence 3568888887544 577889999999999999999875
No 134
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=29.64 E-value=40 Score=24.37 Aligned_cols=91 Identities=8% Similarity=-0.026 Sum_probs=51.6
Q ss_pred CCeEEEEecCCCCc---hhhHHHHHHHHhCCC---eEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCC
Q 027708 8 KRSVLLLCGDYMED---YEAMVPFQALLAFGV---SVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDE 81 (220)
Q Consensus 8 ~~kI~il~~~g~~~---~e~~~~~~~l~~ag~---~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~ 81 (220)
+.||+|+....... .-+.+..+.|.+.|. +++++...+ +.-+++....-..
T Consensus 10 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPG----------------------afEiP~aa~~la~- 66 (158)
T 1di0_A 10 SFKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPG----------------------AYEIPLHAKTLAR- 66 (158)
T ss_dssp CEEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESS----------------------GGGHHHHHHHHHH-
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCc----------------------HHHHHHHHHHHHh-
Confidence 46999999875443 456777888888763 355554322 1112222221111
Q ss_pred CCCCCccEEEEcCCC--C--ccc-ccCChHHHHHHHHHHhCCCeEEE
Q 027708 82 IDPTKYDGLVIPGGR--A--PEY-LAMNDSVIDLVRKFSNSGKTIAS 123 (220)
Q Consensus 82 ~~~~~~D~liipGG~--~--~~~-~~~~~~l~~~l~~~~~~g~~i~a 123 (220)
..+||+++..|-. | +.+ +..+.....+.+-....++||+.
T Consensus 67 --~~~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~ 111 (158)
T 1di0_A 67 --TGRYAAIVGAAFVIDGGIYDHDFVATAVINGMMQVQLETEVPVLS 111 (158)
T ss_dssp --TSCCSEEEEEEECCCCSSBCCHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred --cCCCCEEEEeeccccCCCcHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 2479999998753 2 111 22344455555666677888764
No 135
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=29.34 E-value=27 Score=26.83 Aligned_cols=37 Identities=8% Similarity=-0.244 Sum_probs=23.8
Q ss_pred CCeEEEEecCCCC---chhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYME---DYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~---~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+++|++++.+-.+ ..-+.+..+.+...|+++.+....
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 47 (293)
T 3l6u_A 8 RNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQ 47 (293)
T ss_dssp -CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 5789999976333 223445566677789988776543
No 136
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=29.16 E-value=73 Score=23.63 Aligned_cols=35 Identities=14% Similarity=-0.017 Sum_probs=26.4
Q ss_pred CeEEEEecC-CCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 9 RSVLLLCGD-YMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 9 ~kI~il~~~-g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
++|.+...+ ...+.........|+..|++|..++.
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~ 124 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV 124 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCC
Confidence 466666554 56677888889999999999887754
No 137
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=29.10 E-value=85 Score=22.31 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=29.5
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
.+-|++|+.+..| ..+.+.+.++.+.++|.++.+|+.
T Consensus 95 ~~~d~vI~iS~sG-----~t~~~~~~~~~ak~~g~~vi~IT~ 131 (183)
T 2xhz_A 95 TPQDVVIAISNSG-----ESSEITALIPVLKRLHVPLICITG 131 (183)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCCEEEEEC
Confidence 3568888877544 577899999999999999988875
No 138
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=28.98 E-value=63 Score=24.67 Aligned_cols=37 Identities=11% Similarity=-0.105 Sum_probs=25.3
Q ss_pred CCeEEEEecCC---CCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDY---MEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g---~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
.++|++++.+- |...-+.+..+.+...|+.+.+....
T Consensus 15 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 54 (298)
T 3tb6_A 15 NKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTN 54 (298)
T ss_dssp CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899998753 33334556667777889998887654
No 139
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=28.70 E-value=2.2e+02 Score=22.59 Aligned_cols=33 Identities=6% Similarity=-0.138 Sum_probs=23.3
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
++||.|+=.- ....+.....|...|++|.....
T Consensus 4 ~~~i~~iGiG---g~Gms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIG---GTFMGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCC---SHHHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEEC---HHHHHHHHHHHHhCCCEEEEEcC
Confidence 3688777544 34566677899999999877644
No 140
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=28.70 E-value=1.2e+02 Score=22.92 Aligned_cols=35 Identities=9% Similarity=-0.046 Sum_probs=29.2
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
|||.+-+.-+.-..-.....+.|.+.|++|.++-.
T Consensus 5 k~IllgvTGaiaa~k~~~ll~~L~~~g~eV~vv~T 39 (209)
T 3zqu_A 5 ERITLAMTGASGAQYGLRLLDCLVQEEREVHFLIS 39 (209)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 59999998888777777888899999999987744
No 141
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.48 E-value=1.2e+02 Score=19.50 Aligned_cols=31 Identities=10% Similarity=0.091 Sum_probs=19.6
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEE
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAA 41 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~ 41 (220)
++||.|+=-+ ..........|...|+.+..+
T Consensus 7 ~~~ilivdd~---~~~~~~l~~~L~~~g~~v~~~ 37 (130)
T 3eod_A 7 GKQILIVEDE---QVFRSLLDSWFSSLGATTVLA 37 (130)
T ss_dssp TCEEEEECSC---HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEeCC---HHHHHHHHHHHHhCCceEEEe
Confidence 4666655332 334556677888889987654
No 142
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=28.39 E-value=62 Score=21.86 Aligned_cols=69 Identities=14% Similarity=0.117 Sum_probs=36.2
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHh--CCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecC
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSN--SGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEP 162 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~--~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~ 162 (220)
.++|.|++...........+..+.+|+.+... ++|+++.++++.. -.| .+.....+.+++.|...+.+
T Consensus 44 ~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t~g~-------~~~---~a~~~l~~~l~~~G~~~v~~ 113 (138)
T 5nul_A 44 LNEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGW-------GDG---KWMRDFEERMNGYGCVVVET 113 (138)
T ss_dssp TTCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEEEEEEEESS-------SCS---HHHHHHHHHHHHTTCEECSC
T ss_pred hhCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEEEEEEecCC-------CCC---hHHHHHHHHHHHCCCEEECC
Confidence 37998888543211111111146677776653 7888888886421 001 11122335566667777754
Q ss_pred C
Q 027708 163 E 163 (220)
Q Consensus 163 ~ 163 (220)
.
T Consensus 114 ~ 114 (138)
T 5nul_A 114 P 114 (138)
T ss_dssp C
T ss_pred c
Confidence 3
No 143
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=28.25 E-value=83 Score=22.33 Aligned_cols=38 Identities=13% Similarity=0.124 Sum_probs=29.7
Q ss_pred CCeEEEEecCCCCchh--hHHHHHHHHhCCCeEEEEcCCC
Q 027708 8 KRSVLLLCGDYMEDYE--AMVPFQALLAFGVSVDAACPGK 45 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e--~~~~~~~l~~ag~~v~~~s~~~ 45 (220)
.+++.|++.||....+ +....+.++..|..+..++...
T Consensus 122 ~~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG~ 161 (178)
T 2xgg_A 122 VPKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVGH 161 (178)
T ss_dssp SCEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC-
T ss_pred CCEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcCC
Confidence 3689999999987655 6677788888899888887643
No 144
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=28.19 E-value=64 Score=25.62 Aligned_cols=87 Identities=14% Similarity=0.065 Sum_probs=48.4
Q ss_pred CCeEEEEecCCCC----chhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCC
Q 027708 8 KRSVLLLCGDYME----DYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEID 83 (220)
Q Consensus 8 ~~kI~il~~~g~~----~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~ 83 (220)
+++|++++.+-.. ..-..+..+.+...|+++.+......+ -.. . ..+.++-
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~~-----------------~~~-----~---~~i~~~i 57 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERDP-----------------QNT-----L---QQARELF 57 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTCH-----------------HHH-----H---HHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECCCCH-----------------HHH-----H---HHHHHHH
Confidence 4689999976433 233445556666679988776443210 000 0 0011110
Q ss_pred C--CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehH
Q 027708 84 P--TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 127 (220)
Q Consensus 84 ~--~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G 127 (220)
. ..+|+||+.+. .......++++.+.|.+++.+...
T Consensus 58 ~~~~~vDgiIi~~~--------~~~~~~~~~~~~~~giPvV~~~~~ 95 (350)
T 3h75_A 58 QGRDKPDYLMLVNE--------QYVAPQILRLSQGSGIKLFIVNSP 95 (350)
T ss_dssp HSSSCCSEEEEECC--------SSHHHHHHHHHTTSCCEEEEEESC
T ss_pred hcCCCCCEEEEeCc--------hhhHHHHHHHHHhCCCcEEEEcCC
Confidence 1 36899999641 113345667777788888887643
No 145
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=28.00 E-value=37 Score=23.56 Aligned_cols=35 Identities=11% Similarity=-0.014 Sum_probs=25.1
Q ss_pred CeEEEEecC-CCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 9 RSVLLLCGD-YMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 9 ~kI~il~~~-g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
+||.+.... .............|+..||+|..++.
T Consensus 4 ~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 4 KTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 466666554 35556667777999999999987754
No 146
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=27.92 E-value=26 Score=27.15 Aligned_cols=34 Identities=15% Similarity=-0.021 Sum_probs=22.1
Q ss_pred CCeEEEEecCCCCc---hhhHHHHHHHHhCCCeEEEE
Q 027708 8 KRSVLLLCGDYMED---YEAMVPFQALLAFGVSVDAA 41 (220)
Q Consensus 8 ~~kI~il~~~g~~~---~e~~~~~~~l~~ag~~v~~~ 41 (220)
+++|++++.+.-+. .-+.+..+.+...|+++.+.
T Consensus 4 ~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~ 40 (305)
T 3g1w_A 4 NETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYR 40 (305)
T ss_dssp -CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEe
Confidence 36899999764332 23345556666779988774
No 147
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=27.84 E-value=80 Score=20.78 Aligned_cols=31 Identities=13% Similarity=0.153 Sum_probs=18.3
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAAC 42 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s 42 (220)
++|.|+ +. +..........|...|+++..+.
T Consensus 7 ~~iliv--dd-~~~~~~~l~~~L~~~g~~v~~~~ 37 (136)
T 3kto_A 7 PIIYLV--DH-QKDARAALSKLLSPLDVTIQCFA 37 (136)
T ss_dssp CEEEEE--CS-CHHHHHHHHHHHTTSSSEEEEES
T ss_pred CeEEEE--cC-CHHHHHHHHHHHHHCCcEEEEeC
Confidence 455544 32 23345556677888888876553
No 148
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=27.79 E-value=98 Score=21.72 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=22.5
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+||+++...+..-.-++..+--=...++++..++..
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~~~~~v~SAGt~ 44 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLLPSKKINSAGVG 44 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCTTSEEEEEETT
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhcCCCEEEecccc
Confidence 699999998877655554332222245777666653
No 149
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=27.72 E-value=62 Score=25.10 Aligned_cols=36 Identities=19% Similarity=0.093 Sum_probs=27.4
Q ss_pred CCeEEEEecC-CCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 8 KRSVLLLCGD-YMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 8 ~~kI~il~~~-g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
.+||.+...+ ...+.........|+..|++|..++.
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~ 159 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGR 159 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 3567666654 55678888889999999999987765
No 150
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=27.68 E-value=1.1e+02 Score=22.79 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=30.9
Q ss_pred CCeEEEEecCCCCch-hhHHHHHHHHhCCCeEEEEcCCC
Q 027708 8 KRSVLLLCGDYMEDY-EAMVPFQALLAFGVSVDAACPGK 45 (220)
Q Consensus 8 ~~kI~il~~~g~~~~-e~~~~~~~l~~ag~~v~~~s~~~ 45 (220)
+|||.+-+.-+.... ......+.|++.|++|.++-...
T Consensus 7 ~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp TCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 589999998877777 78888899999999998775443
No 151
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=27.64 E-value=64 Score=24.47 Aligned_cols=37 Identities=5% Similarity=-0.168 Sum_probs=24.6
Q ss_pred CCeEEEEecCCCC---chhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYME---DYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~---~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+++|++++.+-.+ ..-+.+..+.+...|+++.+....
T Consensus 7 s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 46 (276)
T 3jy6_A 7 SKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDAN 46 (276)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999976322 233445566677789998877654
No 152
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=27.44 E-value=46 Score=26.41 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=27.0
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
.++|+||++== . ...+.+.+.|+.....+..|.++++|.
T Consensus 68 ~~~D~vilavk----~-~~~~~~l~~l~~~l~~~~~iv~l~nGi 106 (312)
T 3hn2_A 68 GPMDLVLVGLK----T-FANSRYEELIRPLVEEGTQILTLQNGL 106 (312)
T ss_dssp CCCSEEEECCC----G-GGGGGHHHHHGGGCCTTCEEEECCSSS
T ss_pred CCCCEEEEecC----C-CCcHHHHHHHHhhcCCCCEEEEecCCC
Confidence 37899999531 1 123456677777777788899999886
No 153
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=27.33 E-value=51 Score=27.05 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=25.3
Q ss_pred CCeEEEEecCCCC-chhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYME-DYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~-~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
++||+++...+.- ..-+......|.+.|++|.++++.
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~ 44 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPP 44 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCH
Confidence 4689987654321 223566777888899999999764
No 154
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=27.19 E-value=1.8e+02 Score=21.19 Aligned_cols=67 Identities=12% Similarity=0.097 Sum_probs=39.5
Q ss_pred cCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeE-ecCC----CCceEEEcCCEEe
Q 027708 102 AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASW-IEPE----TMAACVVDGNIIT 176 (220)
Q Consensus 102 ~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~-~~~~----~~~~~v~dg~iiT 176 (220)
..++.+.+.|.++.++|..|--+.. .............+.+.|... .... ....+++||+++.
T Consensus 69 ~~~~~i~~aL~~aa~rGV~Vrii~D------------~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~H~K~~viD~~~~~ 136 (196)
T 4ggj_A 69 FSSPQLGRAVQLLHQRGVRVRVITD------------CDYMALNGSQIGLLRKAGIQVRHDQDLGYMHHKFAIVDKKVLI 136 (196)
T ss_dssp BCCHHHHHHHHHHHHTTCEEEEEES------------SCCC---CCHHHHHHHTTCEEEECCSSSCCCCEEEEETTTEEE
T ss_pred eCCHHHHHHHHHHHHcCCcEEEEEe------------cccccccHHHHHHHHhcCCCcccccccccccCcEEEEcceEEE
Confidence 4678899999999999988877642 222222223345566655432 2222 1456888998666
Q ss_pred CCCC
Q 027708 177 GATY 180 (220)
Q Consensus 177 s~g~ 180 (220)
.+|.
T Consensus 137 ~GS~ 140 (196)
T 4ggj_A 137 TGSL 140 (196)
T ss_dssp EESC
T ss_pred ecCc
Confidence 5554
No 155
>1l1s_A Hypothetical protein MTH1491; structural genomics, PSI, protein STRU initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.114.1.1
Probab=26.94 E-value=78 Score=20.81 Aligned_cols=56 Identities=14% Similarity=0.200 Sum_probs=36.5
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHH---HHhCcccCCceE
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLI---LAAADVVKGRKC 142 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~---La~aglL~g~~~ 142 (220)
+.|+.+|.=|.+...+..+..+.+.|+++.+.|..+ .+|.-+.- +.+..|++|-+.
T Consensus 34 ~~~i~vv~~G~av~~~~~~~~~~~~i~~L~~~gV~~-~~C~~~l~~~~i~~~~L~~~v~i 92 (113)
T 1l1s_A 34 SVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGVRF-CACSNTLRASGMDGDDLLEGVDV 92 (113)
T ss_dssp SEEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTCEE-EEEHHHHHHTTCCGGGBCTTCEE
T ss_pred CCcEEEEEechHHHHHHcCChHHHHHHHHHHCCCEE-EecHHHHHHcCCCHHHcCCCCEE
Confidence 578888888777655556677889999888877654 46766522 112235665553
No 156
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=26.78 E-value=73 Score=23.70 Aligned_cols=36 Identities=6% Similarity=-0.004 Sum_probs=29.6
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
++||.+.+.-+....-.....+.|++.|++|.++-.
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T 43 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMT 43 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEEC
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEc
Confidence 478999998888777778888899889999987744
No 157
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=26.50 E-value=60 Score=24.63 Aligned_cols=40 Identities=15% Similarity=0.325 Sum_probs=24.5
Q ss_pred CCccEEEEcCCCCccc-ccCChHHHHHHHHHH-------hCCCeEEEEehH
Q 027708 85 TKYDGLVIPGGRAPEY-LAMNDSVIDLVRKFS-------NSGKTIASICHG 127 (220)
Q Consensus 85 ~~~D~liipGG~~~~~-~~~~~~l~~~l~~~~-------~~g~~i~aic~G 127 (220)
.++|+||+.. |.+ ..-.+.+..||-+.. -.||+++.++++
T Consensus 78 ~~AD~iI~~s---P~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~ 125 (242)
T 1sqs_A 78 LESDIIIISS---PVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVA 125 (242)
T ss_dssp HHCSEEEEEE---EECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEE
T ss_pred HHCCEEEEEc---cccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeC
Confidence 4789999954 222 123556667776652 257777777665
No 158
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=26.47 E-value=68 Score=24.75 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=23.1
Q ss_pred CCeEEEEecCC----CCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDY----MEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g----~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
++||++|...- ....=+-.+.+.+...|.+++++...
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~ 74 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPS 74 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 57898888642 22222333456666778888887654
No 159
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=26.41 E-value=1.4e+02 Score=22.74 Aligned_cols=36 Identities=8% Similarity=-0.307 Sum_probs=23.1
Q ss_pred CCeEEEEecC-C------CCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 8 KRSVLLLCGD-Y------MEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 8 ~~kI~il~~~-g------~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
+++|++++.+ - |...-+.+..+.++..|+.+.+...
T Consensus 4 s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 46 (287)
T 3bbl_A 4 SFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFPF 46 (287)
T ss_dssp CCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred eeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 3689999865 2 2223344556677788998877543
No 160
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=26.30 E-value=83 Score=22.35 Aligned_cols=37 Identities=27% Similarity=0.374 Sum_probs=28.7
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
.+-|++|+.+..| ..+.+.+.++.+.++|.++.+|+.
T Consensus 81 ~~~d~vi~iS~sG-----~t~~~~~~~~~ak~~g~~vi~IT~ 117 (180)
T 1jeo_A 81 EKDDLLILISGSG-----RTESVLTVAKKAKNINNNIIAIVC 117 (180)
T ss_dssp CTTCEEEEEESSS-----CCHHHHHHHHHHHTTCSCEEEEES
T ss_pred CCCCEEEEEeCCC-----CcHHHHHHHHHHHHCCCcEEEEeC
Confidence 3567777776443 467889999999999999998875
No 161
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=25.77 E-value=2.5e+02 Score=22.33 Aligned_cols=110 Identities=13% Similarity=0.012 Sum_probs=61.4
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCC-CCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDV-CPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~-~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
++|.|++-+|-+.-+-......|...|++|.++-+....... ..... ......|..+.+.. ..+....+
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~~~a~~~~--------~~~~~~g~~~~~~~--~~l~~~~~ 202 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNEL--------SLFSKTQGQQVSSL--KDLPTSPV 202 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCCHHHHHHH--------HHHHTSSCEEESCS--TTSCSSCC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCCCCCHHHHHHH--------HHHHHcCCccccch--hhhccCCC
Confidence 589999999999999999999999999999987654211000 00000 00011122222110 11110235
Q ss_pred cEEEEcCCCCc-ccccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 88 DGLVIPGGRAP-EYLAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 88 D~liipGG~~~-~~~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
|+||=.=|.+- ..+...+.+.++|+...+.+.+|.||..-+
T Consensus 203 dlIIDALG~G~~~~l~~~~~~~~lI~~iN~~~~~VvAVDiPS 244 (306)
T 3d3j_A 203 DLVINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPV 244 (306)
T ss_dssp SEEEEECCCTTCGGGGGCHHHHHHHHHHHHSCCCEEEESCCC
T ss_pred CEEEECCCCCCCCccCcchHHHHHHHHHHhcCCCEEEEECCC
Confidence 55442213332 222212577777777777889999998554
No 162
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=25.45 E-value=1.1e+02 Score=21.80 Aligned_cols=36 Identities=6% Similarity=-0.016 Sum_probs=28.8
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEeh
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 126 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~ 126 (220)
+-|++|+.+..| ..+.+.+.++.+.++|.++.+|..
T Consensus 87 ~~d~~i~iS~sG-----~t~~~~~~~~~ak~~g~~vi~IT~ 122 (187)
T 3sho_A 87 PTDLMIGVSVWR-----YLRDTVAALAGAAERGVPTMALTD 122 (187)
T ss_dssp TTEEEEEECCSS-----CCHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCCEEEEeC
Confidence 467888876544 467899999999999999998875
No 163
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=24.80 E-value=1.6e+02 Score=19.83 Aligned_cols=81 Identities=11% Similarity=0.014 Sum_probs=44.7
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKY 87 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~ 87 (220)
+++|+|+=...-..---......|...||++..+.|+.+ .+ .|.+ .-.++.+++ . .
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~-----------------~i---~G~~--~y~sl~dlp-~-v 59 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKG-----------------EV---LGKT--IINERPVIE-G-V 59 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCS-----------------EE---TTEE--CBCSCCCCT-T-C
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCC-----------------cC---CCee--ccCChHHCC-C-C
Confidence 478999854322222233455667777998888877543 12 2322 223566664 3 8
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCe
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKT 120 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~ 120 (220)
|+++|.= ..+.+.+.+++..+.|..
T Consensus 60 Dlavi~~--------p~~~v~~~v~e~~~~g~k 84 (122)
T 3ff4_A 60 DTVTLYI--------NPQNQLSEYNYILSLKPK 84 (122)
T ss_dssp CEEEECS--------CHHHHGGGHHHHHHHCCS
T ss_pred CEEEEEe--------CHHHHHHHHHHHHhcCCC
Confidence 8888742 223444555555555533
No 164
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=24.27 E-value=82 Score=24.69 Aligned_cols=38 Identities=16% Similarity=0.019 Sum_probs=26.2
Q ss_pred CeEEEEecC---------------CCC--chhhHHHHHHHHhCCCeEEEEcCCCC
Q 027708 9 RSVLLLCGD---------------YME--DYEAMVPFQALLAFGVSVDAACPGKK 46 (220)
Q Consensus 9 ~kI~il~~~---------------g~~--~~e~~~~~~~l~~ag~~v~~~s~~~~ 46 (220)
+||+++... ..- ..-+......|.+.|++|.+++....
T Consensus 4 mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 58 (342)
T 2iuy_A 4 LKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGS 58 (342)
T ss_dssp CEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTS
T ss_pred cEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 589998865 111 12344567788889999999987643
No 165
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=24.27 E-value=1e+02 Score=24.33 Aligned_cols=44 Identities=14% Similarity=0.000 Sum_probs=35.0
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhC
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 134 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~a 134 (220)
.+-|++|+.+-.| ..+++++.++.+.++|.++.+|++.. -|++.
T Consensus 78 ~~~dlvI~iS~SG-----~T~e~~~a~~~ak~~g~~~iaIT~~~-~La~~ 121 (302)
T 1tzb_A 78 ARDGLLIAVSYSG-----NTIETLYTVEYAKRRRIPAVAITTGG-RLAQM 121 (302)
T ss_dssp CSSSEEEEECSSS-----CCHHHHHHHHHHHHTTCCEEEEESST-TGGGS
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCeEEEECCCc-hHHHC
Confidence 3578888877544 57889999999999998899999887 77766
No 166
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=30.04 E-value=16 Score=27.26 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=23.4
Q ss_pred CCccEEEEcCCCCcccc-cCChHHHHHHHHH---HhCCCeEEEEehH
Q 027708 85 TKYDGLVIPGGRAPEYL-AMNDSVIDLVRKF---SNSGKTIASICHG 127 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~-~~~~~l~~~l~~~---~~~g~~i~aic~G 127 (220)
.+.|+||+..-.....+ ..-+.+++|+... .-+||+++.++++
T Consensus 72 ~~AD~iIi~tP~Y~~s~p~~lK~~iD~l~~~~~~~l~gK~v~~v~ts 118 (199)
T 3s2y_A 72 ATADAVVIVTPEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTAS 118 (199)
Confidence 47999998542111111 1234555666543 2358888877754
No 167
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=24.19 E-value=2.2e+02 Score=21.21 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=27.3
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+.|++++.....+- -.....+|+++|+.|...+..
T Consensus 9 ~l~~avVCaSN~NR--SMEaH~~L~k~G~~V~SfGTG 43 (198)
T 3p9y_A 9 KLAVAVVDSSNMNR--SMEAHNFLAKKGFNVRSYGTG 43 (198)
T ss_dssp CCEEEEEESSSSSH--HHHHHHHHHHTTCEEEEEECS
T ss_pred CceEEEEcCCCCcc--cHHHHHHHHhCCCceeecCCC
Confidence 57999999987763 255667999999998877654
No 168
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=24.06 E-value=39 Score=24.24 Aligned_cols=35 Identities=26% Similarity=0.014 Sum_probs=24.0
Q ss_pred CeEEEEecC-CCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 9 RSVLLLCGD-YMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 9 ~kI~il~~~-g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
+||.+.... .............|+..||+|.....
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~ 54 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL 54 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 466665544 34456667788899999999876543
No 169
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=24.05 E-value=42 Score=24.20 Aligned_cols=91 Identities=14% Similarity=0.128 Sum_probs=51.0
Q ss_pred CCeEEEEecCCCCc---hhhHHHHHHHHhCCC--eEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCC
Q 027708 8 KRSVLLLCGDYMED---YEAMVPFQALLAFGV--SVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEI 82 (220)
Q Consensus 8 ~~kI~il~~~g~~~---~e~~~~~~~l~~ag~--~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~ 82 (220)
+.||+|+....... .-+.+..+.|.+.|. +++++...+ +.-+++....-..
T Consensus 13 ~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPG----------------------afEiP~aa~~la~-- 68 (156)
T 1c2y_A 13 SFRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPG----------------------AYELGVTAQALGK-- 68 (156)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESS----------------------HHHHHHHHHHHHH--
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCc----------------------HHHHHHHHHHHHh--
Confidence 46899999875443 556778889988884 444443322 1112222221111
Q ss_pred CCCCccEEEEcCCC--C--ccc-ccCChHHHHHHHHHHhCCCeEEE
Q 027708 83 DPTKYDGLVIPGGR--A--PEY-LAMNDSVIDLVRKFSNSGKTIAS 123 (220)
Q Consensus 83 ~~~~~D~liipGG~--~--~~~-~~~~~~l~~~l~~~~~~g~~i~a 123 (220)
..+||+++..|-. | +.+ +..+.....+.+-..+.++||..
T Consensus 69 -~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl~~v~L~~~vPV~~ 113 (156)
T 1c2y_A 69 -SGKYHAIVCLGAVVKGDTSHYDAVVNSASSGVLSAGLNSGVPCVF 113 (156)
T ss_dssp -TTCCSEEEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred -cCCCCEEEEecccccCCchHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 2479999998753 2 211 22344445555555667888763
No 170
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=23.75 E-value=1.3e+02 Score=23.58 Aligned_cols=37 Identities=22% Similarity=0.147 Sum_probs=30.0
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGK 45 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~ 45 (220)
++||+|-==||+....+..+.+.|+. +.+|.++.|..
T Consensus 11 ~m~ILlTNDDGi~apGi~aL~~~l~~-~~~V~VVAP~~ 47 (261)
T 3ty2_A 11 KLRLLLSNDDGVYAKGLAILAKTLAD-LGEVDVVAPDR 47 (261)
T ss_dssp CCEEEEECSSCTTCHHHHHHHHHHTT-TSEEEEEEESS
T ss_pred CCeEEEEcCCCCCCHHHHHHHHHHHh-cCCEEEEecCC
Confidence 35665555689999999999999988 67999998865
No 171
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=23.72 E-value=1.4e+02 Score=22.43 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=29.4
Q ss_pred CCeEEEEecCCCCchh-hHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYMEDYE-AMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e-~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+|||.+-+.-+..... .....+.|++.|++|.++-..
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 4799999988766664 778889999999999877543
No 172
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=23.57 E-value=64 Score=24.43 Aligned_cols=35 Identities=6% Similarity=-0.065 Sum_probs=21.6
Q ss_pred CeEEEEecCCCCc---hhhHHHHHHHHhCCCeEEEEcC
Q 027708 9 RSVLLLCGDYMED---YEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 9 ~kI~il~~~g~~~---~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
++|++++.+--+. .-+.+..+.++..|+++.+...
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~ 39 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDS 39 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcCcEEEEeCC
Confidence 6899998753222 2334445566677998877643
No 173
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=23.54 E-value=50 Score=23.02 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=22.9
Q ss_pred CCCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEe
Q 027708 84 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASIC 125 (220)
Q Consensus 84 ~~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic 125 (220)
..+||.|++....... .-.+.+..|+.+....++.++++|
T Consensus 74 l~~~d~iilG~P~~~g--~~~~~~~~fl~~~~~~~~k~~~~~ 113 (151)
T 3edo_A 74 YNNYDLILIGSPVWSG--YPATPIKTLLDQMKNYRGEVASFF 113 (151)
T ss_dssp GGGCSEEEEEEEEETT--EECTHHHHHHHHTTTCCSEEEEEE
T ss_pred HhhCCEEEEEcceecc--cccHHHHHHHHhchhcCCEEEEEE
Confidence 3589999995321111 235678888887654344444444
No 174
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=23.32 E-value=1.1e+02 Score=20.19 Aligned_cols=40 Identities=10% Similarity=0.107 Sum_probs=25.0
Q ss_pred CCccEEEEcCCCCcccccCChH--HHHHHHHHHh--CCCeEEEEeh
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSN--SGKTIASICH 126 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~--l~~~l~~~~~--~g~~i~aic~ 126 (220)
.++|.|++....... ...+. +.+|+.+... ++|+++.+++
T Consensus 45 ~~~d~vi~g~p~y~~--~~~~~~~~~~fl~~l~~~l~~k~~~~~~t 88 (137)
T 2fz5_A 45 ASKDVILLGCPAMGS--EELEDSVVEPFFTDLAPKLKGKKVGLFGS 88 (137)
T ss_dssp HTCSEEEEECCCBTT--TBCCHHHHHHHHHHHGGGCSSCEEEEEEE
T ss_pred hcCCEEEEEccccCC--CCCCHHHHHHHHHHhhhhcCCCEEEEEEe
Confidence 368999985432111 12344 7778777543 6888887775
No 175
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=22.95 E-value=1.4e+02 Score=22.71 Aligned_cols=32 Identities=13% Similarity=-0.011 Sum_probs=21.6
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+||.|.=. |+-...+ ...|.+.|++|..++..
T Consensus 6 ~~ilVtGa-G~iG~~l---~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFGH-GYTARVL---SRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEETC-CHHHHHH---HHHHGGGTCEEEEEESC
T ss_pred CcEEEECC-cHHHHHH---HHHHHHCCCEEEEEEcC
Confidence 68888765 6554433 44677779999887664
No 176
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=22.93 E-value=2.8e+02 Score=23.53 Aligned_cols=32 Identities=9% Similarity=-0.085 Sum_probs=22.9
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEc
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAAC 42 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s 42 (220)
.+||.|+=.-+. ..++...+|...|++|....
T Consensus 22 ~~~v~viGiG~s---G~s~~A~~l~~~G~~V~~~D 53 (494)
T 4hv4_A 22 VRHIHFVGIGGA---GMGGIAEVLANEGYQISGSD 53 (494)
T ss_dssp CCEEEEETTTST---THHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEEEcHh---hHHHHHHHHHhCCCeEEEEE
Confidence 467877765443 55566789999999987653
No 177
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=22.54 E-value=2.8e+02 Score=21.77 Aligned_cols=30 Identities=13% Similarity=0.036 Sum_probs=20.3
Q ss_pred CCccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEE
Q 027708 85 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIA 122 (220)
Q Consensus 85 ~~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~ 122 (220)
++.|+|+|+-- +....+++.++.++||.|.
T Consensus 65 ~~~D~V~i~tp--------~~~h~~~~~~al~aGkhVl 94 (336)
T 2p2s_A 65 ASIDLIACAVI--------PCDRAELALRTLDAGKDFF 94 (336)
T ss_dssp TTCCEEEECSC--------GGGHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEeCC--------hhhHHHHHHHHHHCCCcEE
Confidence 47999999752 2233566667777888765
No 178
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=22.30 E-value=86 Score=23.56 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=28.7
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHh-CCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLA-FGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~-ag~~v~~~s~~ 44 (220)
++||++.+.-+............|++ .|++|.++-..
T Consensus 19 ~k~IllgvTGsiaa~k~~~lv~~L~~~~g~~V~vv~T~ 56 (206)
T 1qzu_A 19 KFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTE 56 (206)
T ss_dssp SEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEECT
T ss_pred CCEEEEEEeChHHHHHHHHHHHHHhcccCCEEEEEECH
Confidence 57899999988887788888888988 89999877543
No 179
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=22.17 E-value=1.2e+02 Score=23.48 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=29.9
Q ss_pred CCeEEEEecCCCCch--hhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDYMEDY--EAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g~~~~--e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
.+++.|++.||.... ++......++..|..+..++..
T Consensus 128 ~~~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG 166 (281)
T 4hqf_A 128 ANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIG 166 (281)
T ss_dssp CEEEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEES
T ss_pred CCEEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 368999999998754 6778888889999888887664
No 180
>3k1t_A Glutamate--cysteine ligase GSHA; putative gamma-glutamylcysteine synthetase; HET: MSE; 1.90A {Methylobacillus flagellatus KT}
Probab=21.87 E-value=1e+02 Score=25.97 Aligned_cols=37 Identities=16% Similarity=0.093 Sum_probs=31.7
Q ss_pred CeEEEEecCC----CCchhhHHHHHHHHhCCCeEEEEcCCC
Q 027708 9 RSVLLLCGDY----MEDYEAMVPFQALLAFGVSVDAACPGK 45 (220)
Q Consensus 9 ~kI~il~~~g----~~~~e~~~~~~~l~~ag~~v~~~s~~~ 45 (220)
++|+|+--+. |....+..+..+|+.+|++|++-|...
T Consensus 96 ~~iLlIPEnHTRN~fYl~Nv~~L~~I~~~AG~~VriGsl~p 136 (432)
T 3k1t_A 96 RRLLLIPENHTRNTFYLRNVHALTHILRQAGLEVRIGSIAP 136 (432)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred ceEEEecCCCcccHHHHHHHHHHHHHHHHcCceEEEcCCCc
Confidence 7899888765 677899999999999999999988754
No 181
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=21.60 E-value=1.5e+02 Score=23.02 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=30.9
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCCC
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPGK 45 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~~ 45 (220)
|||+|-==||+....+..+.+.|+..| +|.++.|..
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g-~V~VVAP~~ 37 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG-RVVVVAPDR 37 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS-EEEEEEESS
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC-CEEEEecCC
Confidence 477666668999999999999999988 899998865
No 182
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=21.39 E-value=2.4e+02 Score=21.16 Aligned_cols=35 Identities=9% Similarity=-0.062 Sum_probs=22.3
Q ss_pred CCeEEEEecCCCC----chhhHHHHHHHHhCCCeEEEEc
Q 027708 8 KRSVLLLCGDYME----DYEAMVPFQALLAFGVSVDAAC 42 (220)
Q Consensus 8 ~~kI~il~~~g~~----~~e~~~~~~~l~~ag~~v~~~s 42 (220)
+++|++++..... ..-+.+..+.+.+.|+.+.+..
T Consensus 11 ~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 49 (289)
T 3g85_A 11 KPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVI 49 (289)
T ss_dssp CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEEE
T ss_pred CceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 4789999973222 2334555666777898776654
No 183
>2ane_A ATP-dependent protease LA; LONN119, LON protease, hydrolase; 2.03A {Escherichia coli} SCOP: b.122.1.10
Probab=21.34 E-value=53 Score=22.39 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=28.4
Q ss_pred cEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEe
Q 027708 88 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASIC 125 (220)
Q Consensus 88 D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic 125 (220)
|.+++||+.-+.. ...++.++.++++.+.++.++.++
T Consensus 25 ~~vlfPg~~~pL~-V~~~r~i~~v~~a~~~~~~i~lv~ 61 (125)
T 2ane_A 25 DVVVYPHMVIPLF-VGREKSIRCLEAAMDHDKKIMLVA 61 (125)
T ss_dssp SCCCCTTCEEEEE-ECCHHHHHHHHHHHTTTSEEEEEE
T ss_pred CeeeCCCccEEEE-ECCHHHHHHHHHHHhcCCEEEEEE
Confidence 6788888765544 357889999999998888877665
No 184
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=21.24 E-value=95 Score=23.82 Aligned_cols=37 Identities=8% Similarity=-0.245 Sum_probs=24.1
Q ss_pred CCeEEEEecC----C---CCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGD----Y---MEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~----g---~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+++|++++.. - |...=+.+..+.+...|+.+.+....
T Consensus 6 s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 49 (294)
T 3qk7_A 6 TDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDE 49 (294)
T ss_dssp CCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999972 1 22233445566777789998877653
No 185
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=21.11 E-value=1.1e+02 Score=24.57 Aligned_cols=31 Identities=6% Similarity=-0.080 Sum_probs=25.6
Q ss_pred CCeEEEEecCCCCchhhHHHHHHHHhCCCeE
Q 027708 8 KRSVLLLCGDYMEDYEAMVPFQALLAFGVSV 38 (220)
Q Consensus 8 ~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v 38 (220)
.+|++++.-..++..++....+.|+....++
T Consensus 156 ~~kv~~vsQTT~s~~~~~~iv~~L~~r~p~~ 186 (297)
T 3dnf_A 156 HERVGIVAQTTQNEEFFKEVVGEIALWVKEV 186 (297)
T ss_dssp CSEEEEEECTTCCHHHHHHHHHHHHHHSSEE
T ss_pred CCcEEEEEecCCcHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999998754443
No 186
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=21.02 E-value=72 Score=23.26 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=49.6
Q ss_pred CeEEEEecC------CCCchhhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCC
Q 027708 9 RSVLLLCGD------YMEDYEAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEI 82 (220)
Q Consensus 9 ~kI~il~~~------g~~~~e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~ 82 (220)
+|++|+..- ...+..-..+...|...|+++.....-++..+ . +.. .+.+.
T Consensus 4 ~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~--------------~--------I~~--~l~~a 59 (172)
T 3kbq_A 4 KNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLD--------------E--------IGW--AFRVA 59 (172)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHH--------------H--------HHH--HHHHH
T ss_pred CEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHH--------------H--------HHH--HHHHH
Confidence 489998852 35566777788899999988755432111000 0 000 11111
Q ss_pred CCCCccEEEEcCCCCcc--c-------------ccCChHHHHHHHHHHh
Q 027708 83 DPTKYDGLVIPGGRAPE--Y-------------LAMNDSVIDLVRKFSN 116 (220)
Q Consensus 83 ~~~~~D~liipGG~~~~--~-------------~~~~~~l~~~l~~~~~ 116 (220)
..++|+||..||.++. + +..+++..++|+++++
T Consensus 60 -~~~~DlVittGG~g~~~~D~T~ea~a~~~~~~l~~~~e~~~~i~~~~~ 107 (172)
T 3kbq_A 60 -LEVSDLVVSSGGLGPTFDDMTVEGFAKCIGQDLRIDEDALAMIKKKYG 107 (172)
T ss_dssp -HHHCSEEEEESCCSSSTTCCHHHHHHHHHTCCCEECHHHHHHHHHHHC
T ss_pred -HhcCCEEEEcCCCcCCcccchHHHHHHHcCCCeeeCHHHHHHHHHHHc
Confidence 1258999999997642 1 2346777788887775
No 187
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=20.94 E-value=80 Score=24.12 Aligned_cols=37 Identities=5% Similarity=-0.151 Sum_probs=23.5
Q ss_pred CCeEEEEecCC-----CCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 8 KRSVLLLCGDY-----MEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 8 ~~kI~il~~~g-----~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+++|++++.+. |...-+.+..+.+...|+.+.+....
T Consensus 8 s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 49 (288)
T 3gv0_A 8 TNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHI 49 (288)
T ss_dssp CCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBS
T ss_pred CCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecCC
Confidence 57899999752 22233445556666778988776543
No 188
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=20.89 E-value=98 Score=23.49 Aligned_cols=36 Identities=6% Similarity=-0.100 Sum_probs=23.3
Q ss_pred CCeEEEEecC-----CCC---chhhHHHHHHHHhCCCeEEEEcC
Q 027708 8 KRSVLLLCGD-----YME---DYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 8 ~~kI~il~~~-----g~~---~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
+++|++++.+ -.+ ..=+.+..+.+...|+.+.+...
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 51 (292)
T 3k4h_A 8 TKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMSTG 51 (292)
T ss_dssp CCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 5789999876 222 22344556667778998877544
No 189
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=20.77 E-value=1.3e+02 Score=19.42 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=38.9
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHH---HhCcccCCceEe
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLIL---AAADVVKGRKCT 143 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~L---a~aglL~g~~~T 143 (220)
+.|+.++.-|.+...+..+..+.+.++++.+.|. -..+|.-+.-. .+..|++|-+..
T Consensus 29 ~~~v~vv~~g~gv~~~~~~~~~~~~i~~l~~~gV-~~~~C~~s~~~~gi~~~~L~~~v~vv 88 (108)
T 2pd2_A 29 DAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNI-LIVGCENSIRSQNLSHDQLIPGIKIV 88 (108)
T ss_dssp TCEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTC-EEEEEHHHHHHTTCCGGGBCTTCEEE
T ss_pred CCeEEEEEcChHHHHHHcCchHHHHHHHHHHCcC-EEEecHHHHHHcCCCHHHcCCCCEEe
Confidence 5788888888776655566678889998888887 55577666321 223466666655
No 190
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=20.70 E-value=1.6e+02 Score=21.82 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=28.9
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHh--CCCeEEEEeh
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSN--SGKTIASICH 126 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~--~g~~i~aic~ 126 (220)
+-|++|+....+ ..+.+++.++.+.+ +|.++.+|..
T Consensus 106 ~~DlvI~iS~SG-----~t~~~i~~~~~ak~~~~Ga~vI~IT~ 143 (220)
T 3etn_A 106 ENDLLLLISNSG-----KTREIVELTQLAHNLNPGLKFIVITG 143 (220)
T ss_dssp TTCEEEEECSSS-----CCHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEEcCCC-----CCHHHHHHHHHHHhcCCCCeEEEEEC
Confidence 457888876544 46788999999999 9999999985
No 191
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=20.63 E-value=1.3e+02 Score=24.24 Aligned_cols=82 Identities=10% Similarity=0.142 Sum_probs=52.4
Q ss_pred CccEEEEcCCCCcccccCChHHHHHHHHHHhCCCeEEEEehHHHHHHhCcccCCceEecCCCCHHHHHHCCCeEecCCCC
Q 027708 86 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETM 165 (220)
Q Consensus 86 ~~D~liipGG~~~~~~~~~~~l~~~l~~~~~~g~~i~aic~G~~~La~aglL~g~~~T~~~~~~~~l~~~g~~~~~~~~~ 165 (220)
.+++++.|. ..+++.+.++...+++.++..++.|.-++...+-.+|-- ++-...
T Consensus 54 ~p~~vv~P~--------s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~gvv------------------I~l~~~ 107 (322)
T 3tx1_A 54 AADVFVMPK--------TIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIRGVI------------------LHLDLL 107 (322)
T ss_dssp EEEEEEECS--------SHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEEEEE------------------EECTTC
T ss_pred eeeEEEEeC--------CHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCCeEE------------------EECCCC
Confidence 455555553 346788889988899999999999986653321112211 111111
Q ss_pred ceEEEcCCEEeCCCCCCHHHHHHHHHHH
Q 027708 166 AACVVDGNIITGATYEGHPEFIRLFLKA 193 (220)
Q Consensus 166 ~~~v~dg~iiTs~g~~s~~~~~~~li~~ 193 (220)
..+..|++.+|........++..++.+.
T Consensus 108 ~~I~~d~~~v~v~aG~~~~~l~~~l~~~ 135 (322)
T 3tx1_A 108 QTIERNNTQIVAMSGAKLIDTAKFALNE 135 (322)
T ss_dssp CCEEEETTEEEEETTSBHHHHHHHHHHT
T ss_pred CcEEECCCEEEEecCcCHHHHHHHHHHc
Confidence 1244577788888888888888888763
No 192
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=20.50 E-value=86 Score=24.10 Aligned_cols=36 Identities=6% Similarity=-0.109 Sum_probs=23.4
Q ss_pred CCeEEEEecC--------CCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 8 KRSVLLLCGD--------YMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 8 ~~kI~il~~~--------g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
+++|++++.+ .|...=+.+..+.+...|+.+.+...
T Consensus 7 s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~ 50 (295)
T 3hcw_A 7 TYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVS 50 (295)
T ss_dssp SCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred CcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 5789999842 23333455666777778998876543
No 193
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=20.50 E-value=1.8e+02 Score=21.34 Aligned_cols=35 Identities=17% Similarity=0.087 Sum_probs=28.7
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcC
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACP 43 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~ 43 (220)
|||.+-+.-+..........+.|++.|.+|.++-.
T Consensus 2 k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T 36 (189)
T 2ejb_A 2 QKIALCITGASGVIYGIKLLQVLEELDFSVDLVIS 36 (189)
T ss_dssp CEEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 68999998887777778888889999999977643
No 194
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=20.45 E-value=1.2e+02 Score=22.14 Aligned_cols=36 Identities=8% Similarity=-0.082 Sum_probs=30.3
Q ss_pred CeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 9 RSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 9 ~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
+||.+.+.-+............|++.|++|.++-..
T Consensus 3 k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~ 38 (181)
T 1g63_A 3 GKLLICATASINVININHYIVELKQHFDEVNILFSP 38 (181)
T ss_dssp CCEEEEECSCGGGGGHHHHHHHHTTTSSCEEEEECG
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEch
Confidence 689999998888888888899999889999776443
No 195
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=20.31 E-value=80 Score=24.53 Aligned_cols=75 Identities=16% Similarity=0.168 Sum_probs=44.9
Q ss_pred hhHHHHHHHHhCCCeEEEEcCCCCCCCCCCcccccCCCcccccccccCcccccCcCcCCCCCCCccEEEEcCCCCccccc
Q 027708 23 EAMVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLA 102 (220)
Q Consensus 23 e~~~~~~~l~~ag~~v~~~s~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~l~~~~~~~~D~liipGG~~~~~~~ 102 (220)
+..-+.+.|+..+++|++++.+.. . .+ +..+ .++ ..+||+||+..- +...+.
T Consensus 34 g~~~~~~aL~~~~~~V~~i~~~~~-------------------~--~~--fP~~--~~~--L~~yDvIIl~d~-~~~~~l 85 (248)
T 3soz_A 34 GADYLLSCLRQGNIDVDYMPAHIV-------------------Q--TR--FPQT--AEA--LACYDAIVISDI-GSNTFL 85 (248)
T ss_dssp CSHHHHHHHTTTTCEEEEEETTHH-------------------H--HS--CCCS--HHH--HHTCSEEEEESC-CHHHHH
T ss_pred hHHHHHHHHhcCCceeEEeCchhh-------------------h--hh--CCCC--hHH--HhcCCEEEEcCC-Ccchhc
Confidence 455578889999999998875321 0 01 1111 122 248999999742 222210
Q ss_pred ----------CChHHHHHHHHHHhCCCeEEEEe
Q 027708 103 ----------MNDSVIDLVRKFSNSGKTIASIC 125 (220)
Q Consensus 103 ----------~~~~l~~~l~~~~~~g~~i~aic 125 (220)
..+.-.+.|+++.++|.-++.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~V~~GGgLi~~g 118 (248)
T 3soz_A 86 LQNRTFYNMDIIPDALQLIADYVAEGGGLLMIG 118 (248)
T ss_dssp SCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred cCccccccccCCHHHHHHHHHHHHhCCEEEEEc
Confidence 12334788888888888777775
No 196
>1wui_S Periplasmic [NIFE] hydrogenase small subunit; high resolution [NIFE]hydrogenase, oxidoreductase, NI-A state, unready state; HET: NFC; 1.04A {Desulfovibrio vulgaris str} SCOP: e.19.1.1 PDB: 1h2r_S 1ubj_S 1ubh_S 1ubl_S 1ubm_S 1ubo_S 1ubr_S 1ubt_S 1ubu_S 1wuh_S* 1ubk_S* 1wuj_S 1wuk_S 1wul_S 1e3d_A*
Probab=20.29 E-value=62 Score=25.51 Aligned_cols=43 Identities=12% Similarity=0.155 Sum_probs=31.0
Q ss_pred CCccEEEEcCCCCccc-----ccCChHHHHHHHHHHhCCCeEEEEehHH
Q 027708 85 TKYDGLVIPGGRAPEY-----LAMNDSVIDLVRKFSNSGKTIASICHGQ 128 (220)
Q Consensus 85 ~~~D~liipGG~~~~~-----~~~~~~l~~~l~~~~~~g~~i~aic~G~ 128 (220)
.. |+++|-|...... .......+++++++..+-|.|.|+++=+
T Consensus 68 ~~-Dil~VeG~V~~~~~g~~~~~~g~~~l~~~~e~~~~ak~VIAvGsCA 115 (267)
T 1wui_S 68 HG-FIAVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGTCA 115 (267)
T ss_dssp TC-EEEEEESBEECGGGGTTBEETTEEHHHHHHHHGGGSSEEEEESHHH
T ss_pred CC-eEEEEeCCCccCCCcceeecCChHHHHHHHHHhccCCEEEEeeecc
Confidence 46 9999998632110 1123477899999999999999997655
No 197
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=20.14 E-value=53 Score=25.64 Aligned_cols=36 Identities=17% Similarity=-0.034 Sum_probs=22.8
Q ss_pred CCCCCCCCCeEEEEecCCCCchhhHHHHHHHHhCCCeEEEEcCC
Q 027708 1 MANSKGGKRSVLLLCGDYMEDYEAMVPFQALLAFGVSVDAACPG 44 (220)
Q Consensus 1 ~~~~~~~~~kI~il~~~g~~~~e~~~~~~~l~~ag~~v~~~s~~ 44 (220)
||++ +||+|+ |.=.... .....|..+|++|.+...+
T Consensus 1 Mm~~----~kV~VI---GaG~mG~-~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 1 MTGI----TNVTVL---GTGVLGS-QIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCSC----CEEEEE---CCSHHHH-HHHHHHHHTTCEEEEECSS
T ss_pred CCCC----CEEEEE---CCCHHHH-HHHHHHHhCCCeEEEEeCC
Confidence 6655 489998 3322222 2345677889999887654
Done!