BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027709
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 225 bits (573), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 17/203 (8%)
Query: 14 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHAMAPA 73
MTSS+H++SDN + E+++ +S Q P+ ++ SI T ++ Y+ G ++MAP
Sbjct: 1 MTSSIHELSDNIGSHEKQEQRDSHFQPPIPS-ARNYESIVT-SLVYS--DPGTTNSMAPG 56
Query: 74 AYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 133
YPYPDPYYRSIFAP PPQPY G VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 57 QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 107
Query: 134 QYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKG 193
QYHGILRRRQSRA+ ES+NKV+KSRKPYLHESRHLHA+RR RGCGGRFLN+KK + +
Sbjct: 108 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHED 167
Query: 194 MASDDKSQSNLNLNSDKNEIASS 216
+ ++KS NL++ K+ +A+S
Sbjct: 168 SSHEEKS----NLSAGKSAMAAS 186
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 147/207 (71%), Gaps = 19/207 (9%)
Query: 14 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHAMAPA 73
MTSSVH++SDN+++ +++ P+SQ + P+ G S SI T +V MA
Sbjct: 1 MTSSVHELSDNNESHAKKERPDSQTRPQVPS-GRSSESIDTNSVY--------SEPMAHG 51
Query: 74 AYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 133
YPYPDPYYRS+FA Q Y P PY P V LQLMG+QQ GVPL DAVEEPVFVNAK
Sbjct: 52 LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 105
Query: 134 QYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKK----NEN 189
QYHGILRRRQSRAK E+ N+ +K++KPY+HESRHLHA+RR RGCGGRFLN+KK ++
Sbjct: 106 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 165
Query: 190 QQKGMASDDKSQSNLNLNSDKNEIASS 216
+++ + ++ S+++ +L S+K +A+S
Sbjct: 166 EEEATSDENTSEASSSLRSEKLAMATS 192
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 113/213 (53%), Gaps = 36/213 (16%)
Query: 10 RDGLMTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHA 69
++ +T+S D SD +++ H G++ P P+ Q H VG
Sbjct: 79 KESQVTTSPQSAGDYSDKNQESLH-----------HGITQP---PPHPQLVGHTVGWA-- 122
Query: 70 MAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVF 129
++ PY DPYY + Y P PYGG P + PLP + +EPVF
Sbjct: 123 ---SSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRM----------PLPPEMAQEPVF 169
Query: 130 VNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNEN 189
VNAKQY ILRRRQ+RAKAE E K++KSRKPYLHESRH HA+RR RG GGRF +KK
Sbjct: 170 VNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNT 227
Query: 190 QQKGMASDDKS-----QSNLNLNSDKNEIASSD 217
+ +++KS QS + NSD+ E + D
Sbjct: 228 EASKRKAEEKSNGHVTQSPSSSNSDQGEAWNGD 260
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
Query: 106 HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHE 164
HL++MG+ + VPLP E EP+FVNAKQYH ILRRR+ RAK E++NK++K RKPYLHE
Sbjct: 157 HLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHE 216
Query: 165 SRHLHALRRARGCGGRFLNSKKNENQQKGMASD 197
SRHLHAL+RARG GGRFLN+KK + + S
Sbjct: 217 SRHLHALKRARGSGGRFLNTKKLQESSNSLCSS 249
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 95/151 (62%), Gaps = 16/151 (10%)
Query: 55 PNVQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQ 114
PN+ +A A A ++ Y DP+Y + A Y PQ P + Q++ +
Sbjct: 122 PNIHFAP-------AQANFSFHYADPHYGGLLAA----TYLPQA----PTCNPQMVSMIP 166
Query: 115 AGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRR 173
VPLP + E +PVFVNAKQYH I+RRRQ RAK E++NK++++RKPYLHESRH+HAL+R
Sbjct: 167 GRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKR 226
Query: 174 ARGCGGRFLNSKKNENQQKGMASDDKSQSNL 204
RG GGRFLN+KK + + A+ ++ Q L
Sbjct: 227 PRGSGGRFLNTKKLLQESEQAAAREQEQDKL 257
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 87/157 (55%), Gaps = 16/157 (10%)
Query: 66 AGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVE 125
GH +A PY DPYY + Y Q +PY +G+ + LP D +
Sbjct: 122 VGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPY----------LGMPRERTALPLDMAQ 171
Query: 126 EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSK 185
EPV+VNAKQY GILRRR++RAKAE E KV++ RKPYLHESRH HA+RRAR GGRF
Sbjct: 172 EPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKS 231
Query: 186 KNENQQKGMASDDKSQSNLN------LNSDKNEIASS 216
+ E + D + S N + +D NE +S
Sbjct: 232 EVEAGEDAGGRDRERGSATNSSGSEQVETDSNETLNS 268
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 14/117 (11%)
Query: 71 APAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVE-EPVF 129
A ++ Y DP++ + Y PQ P Q VPLP D +E EPVF
Sbjct: 129 ANFSFHYADPHFGGLMPA----AYLPQATIWNP---------QMTRVPLPFDLIENEPVF 175
Query: 130 VNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKK 186
VNAKQ+H I+RRRQ RAK E++NK++K+RKPYLHESRH+HAL+R RG GGRFLN+KK
Sbjct: 176 VNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKK 232
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 98 PYGGQPMV-HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVL 155
PY Q V H Q+ G+ + +PLP + E EP+FVNAKQY ILRRR+ RAK E++NK++
Sbjct: 141 PYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLI 200
Query: 156 KSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKGMA 195
K RKPYLHESRHLHAL+R RG GGRFLN+KK++ ++
Sbjct: 201 KVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLS 240
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 23/164 (14%)
Query: 57 VQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAG 116
+Q A + G M +P+ + YY + A Y Q G+ M+ L+ M ++ G
Sbjct: 82 MQSACFEFGFAQPMMYTKHPHVEQYYGVVSA------YGSQRSSGRVMIPLK-METEEDG 134
Query: 117 VPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARG 176
++VN+KQYHGI+RRRQSRAKAE K+ + RKPY+H SRHLHA+RR RG
Sbjct: 135 T----------IYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRG 181
Query: 177 CGGRFLNSKKNENQQKGMASDDKSQSNLNLNSDKNEIASSDRQS 220
GGRFLN+K + ++ S+ +S + +NE +S R++
Sbjct: 182 SGGRFLNTKTADAAKQSKPSNSQSSEVFH---PENETINSSREA 222
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 122 DAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRF 181
+ VEEP++VNAKQY+ IL+RR +RAK ESENK+ K+RK Y HESRH HA+RR RGCGGRF
Sbjct: 225 EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHESRHQHAIRRQRGCGGRF 284
Query: 182 L 182
L
Sbjct: 285 L 285
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 117 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 174
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 251 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 310
Query: 175 RGCGGRFLNSKKNEN 189
RG GGRF + K+ ++
Sbjct: 311 RGEGGRFFSPKEKDS 325
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 69/123 (56%), Gaps = 24/123 (19%)
Query: 75 YPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQ 134
YPY + Y + + Y G Q V L PL + + ++VN+KQ
Sbjct: 105 YPYGEQQYYGVVSAY----------GSQSRVML----------PLNMETEDSTIYVNSKQ 144
Query: 135 YHGILRRRQSRAKAES--ENKVLKSR--KPYLHESRHLHALRRARGCGGRFLNSKKNENQ 190
YHGI+RRRQSRAKA + + K L SR KPY+H SRHLHALRR RG GGRFLN+K +
Sbjct: 145 YHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLE 204
Query: 191 QKG 193
G
Sbjct: 205 NSG 207
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 117 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 174
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 305
Query: 175 RGCGGRFLNSKKNEN 189
RG GGRF + K+ ++
Sbjct: 306 RGEGGRFFSPKEKDS 320
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 117 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 174
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 252 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 311
Query: 175 RGCGGRFLNSKKNEN 189
RG GGRF + K+ ++
Sbjct: 312 RGEGGRFFSPKEKDS 326
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 117 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRA 174
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R
Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARK 305
Query: 175 RGCGGRFLNSKKNEN 189
RG GGRF + K+ ++
Sbjct: 306 RGEGGRFFSPKEKDS 320
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 119 LPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCG 178
L T E+P +VNAKQY+ IL+RR +RAK E + ++ + RKPYLHESRH HA+RR RG G
Sbjct: 152 LGTAIAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEG 211
Query: 179 GRFLNSK--KNENQQKGMASDD 198
GRFL + K +K ASDD
Sbjct: 212 GRFLTAAEIKAMKSKKSGASDD 233
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 120 PTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGG 179
P++ +E+P +VNAKQY+ IL+RR +RAK E K+ + R+PYLHESRH HA+RR RG GG
Sbjct: 179 PSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGG 238
Query: 180 RFLNS 184
RFL +
Sbjct: 239 RFLTA 243
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 126 EPVFVNAKQYHGILRRRQSRAKAESENK-VLKSRKPYLHESRHLHALRRARGCGGRFLNS 184
E ++VNAKQYH IL+RR++RAK E + V ++KPYLHESRH HA+RR RG GGRFL +
Sbjct: 8 EGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRFLTA 67
Query: 185 KK 186
K
Sbjct: 68 DK 69
>sp|Q3AAE9|MURA1_CARHZ UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=murA1 PE=3 SV=1
Length = 420
Score = 33.9 bits (76), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Query: 83 RSIFAPYDAQ--PYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILR 140
+SI P D + PYP P QP + L L+ + Q T + E VF N ++ LR
Sbjct: 284 KSIIKPVDIKTMPYPGFPTDMQPQI-LALLTLAQG-----TSIISEGVFDNRFKHVEELR 337
Query: 141 RRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQKGMASDDKS 200
R + + ES V+K S H LR A L + + +G+ + D+
Sbjct: 338 RMGADIRLESRIAVIKGVPKLTGASVIAHDLRAAAALVIAGL-AAEGMTVLEGIKNLDRG 396
Query: 201 QSNLNL 206
NL+L
Sbjct: 397 YENLDL 402
>sp|Q2SQL8|THIC_HAHCH Phosphomethylpyrimidine synthase OS=Hahella chejuensis (strain KCTC
2396) GN=thiC PE=3 SV=1
Length = 638
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 2 NLSCRFYMRDGLMTSSVHDMSDNSDADEQRKHPESQLQSSTPAM--GMSHPSITTPNVQY 59
N+S Y R G++T + ++ + ++ E+ ++S P M G + P TP ++
Sbjct: 142 NVSQLHYARKGIITPEMEYIAIRENLALEQAEIENAMRSQHPGMNFGANTPRYITP--EF 199
Query: 60 ATHQVGAGHAMAPAAYPYPD 79
+V AG A+ P +P+
Sbjct: 200 VRQEVAAGRAVIPCNINHPE 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,492,671
Number of Sequences: 539616
Number of extensions: 3976943
Number of successful extensions: 10382
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 10189
Number of HSP's gapped (non-prelim): 236
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)