Your job contains 1 sequence.
>027713
MEVSLLSLSSSQNLTLKPSTNPLFHFHPSKRSKPPPTHIRAAISRTKKEETVDTVKTHLE
NCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNA
WLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAK
LLGALQGSAIGLVGTLQAPARDLLMVLKAYAKKLEDESGQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027713
(220 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2185051 - symbol:EMB3136 "AT5G13510" species:3... 716 9.9e-71 1
TAIR|locus:2092527 - symbol:AT3G12370 "AT3G12370" species... 486 2.3e-46 1
TIGR_CMR|SPO_3510 - symbol:SPO_3510 "ribosomal protein L1... 164 3.1e-12 1
UNIPROTKB|P66044 - symbol:rplJ "50S ribosomal protein L10... 161 6.4e-12 1
TIGR_CMR|BA_0099 - symbol:BA_0099 "ribosomal protein L10"... 151 7.4e-11 1
TIGR_CMR|CHY_2321 - symbol:CHY_2321 "ribosomal protein L1... 150 9.4e-11 1
TIGR_CMR|CBU_0228 - symbol:CBU_0228 "ribosomal protein L1... 144 4.1e-10 1
UNIPROTKB|P0A7J3 - symbol:rplJ "50S ribosomal subunit pro... 142 6.6e-10 1
TIGR_CMR|SO_0222 - symbol:SO_0222 "ribosomal protein L10"... 141 8.4e-10 1
UNIPROTKB|Q9KV32 - symbol:rplJ "50S ribosomal protein L10... 134 4.7e-09 1
TIGR_CMR|VC_0326 - symbol:VC_0326 "ribosomal protein L10"... 134 4.7e-09 1
TIGR_CMR|DET_0991 - symbol:DET_0991 "ribosomal protein L1... 131 9.7e-09 1
TIGR_CMR|GSU_2865 - symbol:GSU_2865 "ribosomal protein L1... 127 2.6e-08 1
TIGR_CMR|CPS_4771 - symbol:CPS_4771 "ribosomal protein L1... 122 8.7e-08 1
>TAIR|locus:2185051 [details] [associations]
symbol:EMB3136 "AT5G13510" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005840 "ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001790 Pfam:PF00466
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0009941
GO:GO:0042254 EMBL:AL391710 GO:GO:0022626 GO:GO:0019843
eggNOG:COG0244 EMBL:AY086884 IPI:IPI00541353 RefSeq:NP_196855.1
UniGene:At.32058 UniGene:At.69710 ProteinModelPortal:Q9FY50
SMR:Q9FY50 STRING:Q9FY50 PaxDb:Q9FY50 PRIDE:Q9FY50
EnsemblPlants:AT5G13510.1 GeneID:831195 KEGG:ath:AT5G13510
GeneFarm:80 TAIR:At5g13510 HOGENOM:HOG000241177 InParanoid:Q9FY50
KO:K02864 OMA:ELRGGVM PhylomeDB:Q9FY50 ProtClustDB:CLSN2684604
Genevestigator:Q9FY50 GermOnline:AT5G13510 InterPro:IPR022973
PANTHER:PTHR11560:SF8 Uniprot:Q9FY50
Length = 220
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 136/180 (75%), Positives = 154/180 (85%)
Query: 39 IRAAISRXXXXXXXXXXXXHLENCHLIAAIKYKGFTVKQFQDLRRSLPENTKLIVAKNTL 98
IR+A+SR HLENCHL+AAI YKG TVKQFQDLRR+LP+ TKLIVAKNTL
Sbjct: 39 IRSAVSRNKKEETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTL 98
Query: 99 VYKAIEGTQWEALKPCMSGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGK 158
V+KAIEGT+WEALKPCM GMNAWLFV T+EIP+AIKPYR+FQKE+KLE NDFAGAVFEGK
Sbjct: 99 VFKAIEGTKWEALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGK 158
Query: 159 FYAPGDFKALESMPTRAEIYAKLLGALQGSAIGLVGTLQAPARDLLMVLKAYAKKLEDES 218
FYAP +FK LE+MPTRAE+YAK+LGALQ AI LV TLQAPAR+++MVL AY KKLEDES
Sbjct: 159 FYAPDNFKVLETMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDES 218
>TAIR|locus:2092527 [details] [associations]
symbol:AT3G12370 "AT3G12370" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] InterPro:IPR001790 Pfam:PF00466
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0042254 GO:GO:0005840
EMBL:AP002047 EMBL:AC069474 eggNOG:COG0244 HOGENOM:HOG000241177
KO:K02864 ProtClustDB:CLSN2684604 InterPro:IPR022973
PANTHER:PTHR11560:SF8 EMBL:AY085935 EMBL:BT003736 EMBL:AK118387
IPI:IPI00521031 RefSeq:NP_187843.1 UniGene:At.39606
ProteinModelPortal:Q9LHH1 SMR:Q9LHH1 STRING:Q9LHH1 PaxDb:Q9LHH1
PRIDE:Q9LHH1 EnsemblPlants:AT3G12370.1 GeneID:820415
KEGG:ath:AT3G12370 TAIR:At3g12370 InParanoid:Q9LHH1 OMA:INLENCH
PhylomeDB:Q9LHH1 Genevestigator:Q9LHH1 Uniprot:Q9LHH1
Length = 171
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 91/144 (63%), Positives = 113/144 (78%)
Query: 58 HLENCHLIAAIKYKGFTVKQFQDLRRSLPENT--KLIVAKNTLVYKAIEGTQWEALKPCM 115
+LENCH I I Y G +VKQ Q+LR L ENT KL+VAKNTLVYKA+EGT+WE+LKPCM
Sbjct: 17 NLENCHFITGINYNGLSVKQLQELRGILRENTNTKLLVAKNTLVYKALEGTKWESLKPCM 76
Query: 116 SGMNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRA 175
GMNAWLFV +E+IPAA+K + NFQKEKKL +N+ GAVFE K YAP D+K +E+MP+RA
Sbjct: 77 KGMNAWLFVQSEDIPAALKTFINFQKEKKLYDNNLGGAVFEEKLYAPQDYKVIETMPSRA 136
Query: 176 EIYAKLLGALQGSAIGLVGTLQAP 199
++Y +LG+L A+ LV LQAP
Sbjct: 137 DVYGMMLGSLHWPALDLVNALQAP 160
>TIGR_CMR|SPO_3510 [details] [associations]
symbol:SPO_3510 "ribosomal protein L10" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466
PROSITE:PS01109 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0244 KO:K02864 OMA:ELRGGVM InterPro:IPR022973
PANTHER:PTHR11560:SF8 HOGENOM:HOG000004852 ProtClustDB:PRK00099
RefSeq:YP_168705.2 ProteinModelPortal:Q5LMQ3 GeneID:3195233
KEGG:sil:SPO3510 PATRIC:23380491 Uniprot:Q5LMQ3
Length = 172
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 60 ENCHLIAAIKYKGFTVKQFQDLR-RSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGM 118
E+ ++ Y G TV + QDLR R+ + VAKN L A+EG ++ ++GM
Sbjct: 18 ESSGVVVVAHYAGLTVAEMQDLRARAREAGGSVRVAKNRLAKIALEGKPCASMADLLTGM 77
Query: 119 NAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIY 178
+ ++E+ AA K F K+ K E GA+ E G +A+ MP+R E+
Sbjct: 78 T--VLTYSEDPVAAAKVAEGFAKDNKKFEI-LGGAMGENALDRAG-VEAVSKMPSREELI 133
Query: 179 AKLLGALQGSAIGLVGTLQAPARDLLMVLKAYAKKLE 215
A+++ + A + G + APA ++ +L +K E
Sbjct: 134 AQIVSCIGAPASNIAGAIGAPASNIAGILSTIIEKAE 170
>UNIPROTKB|P66044 [details] [associations]
symbol:rplJ "50S ribosomal protein L10" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363
Pfam:PF00466 PROSITE:PS01109 GO:GO:0005886 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0042254 GO:GO:0005840
EMBL:BX842574 GO:GO:0003735 eggNOG:COG0244 KO:K02864 OMA:ELRGGVM
InterPro:IPR022973 PANTHER:PTHR11560:SF8 HOGENOM:HOG000004852
ProtClustDB:PRK00099 PIR:H70614 RefSeq:NP_215165.1
RefSeq:NP_335091.1 RefSeq:YP_006513992.1 ProteinModelPortal:P66044
SMR:P66044 PRIDE:P66044 EnsemblBacteria:EBMYCT00000001927
EnsemblBacteria:EBMYCT00000070232 GeneID:13318537 GeneID:888049
GeneID:925963 KEGG:mtc:MT0680 KEGG:mtu:Rv0651 KEGG:mtv:RVBD_0651
PATRIC:18123217 TubercuList:Rv0651 Uniprot:P66044
Length = 178
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 46/145 (31%), Positives = 66/145 (45%)
Query: 69 KYKGFTVKQFQDLRRSLPENTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEE 128
+Y+G TV +LRRSL + VAKNTL+ +A E L G A FV E
Sbjct: 27 EYRGLTVANLAELRRSLTGSATYAVAKNTLIKRAASEAGIEGLDELFVGPTAIAFVTGEP 86
Query: 129 IPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGS 188
+ AA K + F KE K G +G + + + + +R + AKL GA++G+
Sbjct: 87 VDAA-KAIKTFAKEHKALV--IKGGYMDGHPLTVAEVERIADLESREVLLAKLAGAMKGN 143
Query: 189 AIGLVGTLQAPARDLLMVLKAYAKK 213
G APA L + A +K
Sbjct: 144 LAKAAGLFNAPASQLARLAAALQEK 168
>TIGR_CMR|BA_0099 [details] [associations]
symbol:BA_0099 "ribosomal protein L10" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466
PROSITE:PS01109 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0042254 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0244 KO:K02864 OMA:ELRGGVM
InterPro:IPR022973 PANTHER:PTHR11560:SF8 RefSeq:NP_842667.1
RefSeq:YP_016703.1 RefSeq:YP_026385.1 ProteinModelPortal:Q81VU1
DNASU:1086413 EnsemblBacteria:EBBACT00000009447
EnsemblBacteria:EBBACT00000017734 EnsemblBacteria:EBBACT00000019911
GeneID:1086413 GeneID:2814893 GeneID:2852419 KEGG:ban:BA_0099
KEGG:bar:GBAA_0099 KEGG:bat:BAS0099 HOGENOM:HOG000004852
ProtClustDB:PRK00099 BioCyc:BANT260799:GJAJ-110-MONOMER
BioCyc:BANT261594:GJ7F-112-MONOMER Uniprot:Q81VU1
Length = 166
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 68 IKYKGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHT 126
+ Y+G TV + +LR+ L E + V KN+L +A E + L ++G NA F +
Sbjct: 28 VDYRGLTVSEATELRKQLREAGVEFKVYKNSLTRRAAESAEMAELNEFLTGPNAIAFSN- 86
Query: 127 EEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQ 186
E++ A K +F K+ E + V EGK + KA+ ++P+R + + LL LQ
Sbjct: 87 EDVVAPAKVLNDFAKDH--EALEIKAGVIEGKLVTLDEVKAIATLPSREGLLSMLLSVLQ 144
Query: 187 GSAIGLVGTLQAPARDLLMVLKAYAKKLEDE 217
AP R+L + KA A + E++
Sbjct: 145 -----------APIRNLALATKAVADQKEEQ 164
>TIGR_CMR|CHY_2321 [details] [associations]
symbol:CHY_2321 "ribosomal protein L10" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363
Pfam:PF00466 PROSITE:PS01109 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0042254 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0244 KO:K02864 OMA:ELRGGVM
InterPro:IPR022973 PANTHER:PTHR11560:SF8 HOGENOM:HOG000004852
ProtClustDB:PRK00099 RefSeq:YP_361130.1 ProteinModelPortal:Q3A9Q4
STRING:Q3A9Q4 GeneID:3727061 KEGG:chy:CHY_2321 PATRIC:21277709
BioCyc:CHYD246194:GJCN-2320-MONOMER Uniprot:Q3A9Q4
Length = 176
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 46/151 (30%), Positives = 66/151 (43%)
Query: 68 IKYKGFTVKQFQDLRRSLPEN-TKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHT 126
+ Y+G TV + +LRR L E ++ V KNTL +A L P + G A L V
Sbjct: 28 VDYRGLTVAEMTELRRKLKEKGAEIKVVKNTLAKRAAHNLGITGLDPYLEGPTA-LAVAK 86
Query: 127 EEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQ 186
E+ +A K +F K+ E + E KA+ +P R + AKLLG +Q
Sbjct: 87 EDPASAAKVLFDFAKDHPNLE--IKVGILENIVLEKDQVKAIADLPPRNVLLAKLLGGMQ 144
Query: 187 GSAIGLVGTLQAPARDLLMVLKAYAKKLEDE 217
G G L R + L+A K+ E
Sbjct: 145 APLYGFAGALAGMLRKFVYALEAIRKQKAGE 175
>TIGR_CMR|CBU_0228 [details] [associations]
symbol:CBU_0228 "ribosomal protein L10" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] HAMAP:MF_00362 InterPro:IPR001790
InterPro:IPR002363 Pfam:PF00466 PROSITE:PS01109 GO:GO:0006412
GO:GO:0042254 GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003735 eggNOG:COG0244 KO:K02864 OMA:ELRGGVM
InterPro:IPR022973 PANTHER:PTHR11560:SF8 ProtClustDB:PRK00099
HOGENOM:HOG000004851 RefSeq:NP_819272.1 ProteinModelPortal:Q83ET2
GeneID:1208109 KEGG:cbu:CBU_0228 PATRIC:17929147
BioCyc:CBUR227377:GJ7S-234-MONOMER Uniprot:Q83ET2
Length = 174
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 44/144 (30%), Positives = 65/144 (45%)
Query: 67 AIKYKGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVH 125
A Y+G TV + DLR+S E + V +NTL +A + T + L+ ++G LF
Sbjct: 27 AADYRGLTVSEMSDLRKSAREARVHMRVYRNTLARRAFKETTYACLEEVLTGPIV-LFFS 85
Query: 126 TEEIPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGAL 185
EE AA + F KE E + G G+ KA+ +P+R E ++L L
Sbjct: 86 QEEPGAAARLIEKFIKEH--ERLEVKGLALGGELLPAEKLKAVARLPSREEALSQLAAVL 143
Query: 186 QGSAIGLVGTLQAPARDLLMVLKA 209
LV TL P + V+ A
Sbjct: 144 LAPVTKLVRTLNEPIAQVARVMAA 167
>UNIPROTKB|P0A7J3 [details] [associations]
symbol:rplJ "50S ribosomal subunit protein L10"
species:83333 "Escherichia coli K-12" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] HAMAP:MF_00362
InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466 PROSITE:PS01109
GO:GO:0006417 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0042254 GO:GO:0003723
GO:GO:0005840 EMBL:U00006 GO:GO:0003735 EMBL:V00339 eggNOG:COG0244
KO:K02864 InterPro:IPR022973 PANTHER:PTHR11560:SF8
ProtClustDB:PRK00099 HOGENOM:HOG000004851 OMA:EGTDFEC PIR:S12574
RefSeq:NP_418412.1 RefSeq:YP_491476.1 PDB:3J0T PDB:3J0W PDB:3J0Y
PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T
PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14
PDBsum:3SGF PDBsum:3UOS ProteinModelPortal:P0A7J3 SMR:P0A7J3
DIP:DIP-35816N IntAct:P0A7J3 MINT:MINT-1264502 PaxDb:P0A7J3
PRIDE:P0A7J3 EnsemblBacteria:EBESCT00000002708
EnsemblBacteria:EBESCT00000002709 EnsemblBacteria:EBESCT00000017699
GeneID:12930514 GeneID:948490 KEGG:ecj:Y75_p3212 KEGG:eco:b3985
PATRIC:32123491 EchoBASE:EB0864 EcoGene:EG10871
BioCyc:EcoCyc:EG10871-MONOMER BioCyc:ECOL316407:JW3948-MONOMER
Genevestigator:P0A7J3 Uniprot:P0A7J3
Length = 165
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 44/135 (32%), Positives = 69/135 (51%)
Query: 71 KGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEI 129
+G TV + +LR++ E + V +NTL+ +A+EGT +E LK G L ++ E
Sbjct: 31 RGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPT--LIAYSMEH 88
Query: 130 P-AAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGS 188
P AA + ++ F K E A FEG+ L ++PT E A+L+ ++ +
Sbjct: 89 PGAAARLFKEFAKANAKFE--VKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEA 146
Query: 189 AIG-LVGTLQAPARD 202
+ G LV TL A RD
Sbjct: 147 SAGKLVRTLAA-VRD 160
>TIGR_CMR|SO_0222 [details] [associations]
symbol:SO_0222 "ribosomal protein L10" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466
PROSITE:PS01109 GO:GO:0006412 GO:GO:0042254 GO:GO:0005840
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
eggNOG:COG0244 KO:K02864 InterPro:IPR022973 PANTHER:PTHR11560:SF8
ProtClustDB:PRK00099 HOGENOM:HOG000004851 OMA:EGTDFEC
RefSeq:NP_715862.1 ProteinModelPortal:Q8EK76 GeneID:1168105
KEGG:son:SO_0222 PATRIC:23520137 Uniprot:Q8EK76
Length = 166
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 46/135 (34%), Positives = 66/135 (48%)
Query: 71 KGFTVKQFQDLRRSLPENTKLI-VAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEI 129
+G TV LR+ E + V +NTL +A+EGT +E L +G L + E
Sbjct: 31 RGVTVGAMTGLRKKAREAGVYVRVVRNTLARRAVEGTAFECLAETFTGPT--LIAFSNEH 88
Query: 130 P-AAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGS 188
P AA + ++F KE+ E GA FEG F D L +PT E A+L+ ++ +
Sbjct: 89 PGAAARLLKDFAKEQANFE--VKGAAFEGNFIPAADIDRLAKLPTYEEALAQLMMTMKEA 146
Query: 189 AIG-LVGTLQAPARD 202
+ G V TL A RD
Sbjct: 147 SAGKFVRTLAA-LRD 160
>UNIPROTKB|Q9KV32 [details] [associations]
symbol:rplJ "50S ribosomal protein L10" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] HAMAP:MF_00362 InterPro:IPR001790
InterPro:IPR002363 Pfam:PF00466 PROSITE:PS01109 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0244 KO:K02864 InterPro:IPR022973
PANTHER:PTHR11560:SF8 ProtClustDB:PRK00099 OMA:EGTDFEC PIR:D82336
RefSeq:NP_229980.1 ProteinModelPortal:Q9KV32 PRIDE:Q9KV32
DNASU:2615092 GeneID:2615092 KEGG:vch:VC0326 PATRIC:20079709
Uniprot:Q9KV32
Length = 162
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 46/135 (34%), Positives = 68/135 (50%)
Query: 71 KGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEI 129
+G V +LR+ E L V +NTL +A+EGT +E LK G L + E
Sbjct: 31 RGVQVAAMTNLRKQAREAGVYLKVVRNTLARRAVEGTAYECLKDVFVGPT--LIGFSNEH 88
Query: 130 P-AAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGS 188
P AA + +++F KE K E A FEG P + L ++PT E A+L+ ++ +
Sbjct: 89 PGAAARLFKDFAKENKAFE--IKAAAFEGVLTDP---EVLATLPTYDEAIARLMMCMKEA 143
Query: 189 AIG-LVGTLQAPARD 202
+ G LV T+ A RD
Sbjct: 144 SAGKLVRTIAA-VRD 157
>TIGR_CMR|VC_0326 [details] [associations]
symbol:VC_0326 "ribosomal protein L10" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466
PROSITE:PS01109 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0244 KO:K02864 InterPro:IPR022973 PANTHER:PTHR11560:SF8
ProtClustDB:PRK00099 OMA:EGTDFEC PIR:D82336 RefSeq:NP_229980.1
ProteinModelPortal:Q9KV32 PRIDE:Q9KV32 DNASU:2615092 GeneID:2615092
KEGG:vch:VC0326 PATRIC:20079709 Uniprot:Q9KV32
Length = 162
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 46/135 (34%), Positives = 68/135 (50%)
Query: 71 KGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEEI 129
+G V +LR+ E L V +NTL +A+EGT +E LK G L + E
Sbjct: 31 RGVQVAAMTNLRKQAREAGVYLKVVRNTLARRAVEGTAYECLKDVFVGPT--LIGFSNEH 88
Query: 130 P-AAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGS 188
P AA + +++F KE K E A FEG P + L ++PT E A+L+ ++ +
Sbjct: 89 PGAAARLFKDFAKENKAFE--IKAAAFEGVLTDP---EVLATLPTYDEAIARLMMCMKEA 143
Query: 189 AIG-LVGTLQAPARD 202
+ G LV T+ A RD
Sbjct: 144 SAGKLVRTIAA-VRD 157
>TIGR_CMR|DET_0991 [details] [associations]
symbol:DET_0991 "ribosomal protein L10" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466
PROSITE:PS01109 GO:GO:0006412 GO:GO:0042254 GO:GO:0005840
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0244 KO:K02864 OMA:ELRGGVM InterPro:IPR022973
PANTHER:PTHR11560:SF8 HOGENOM:HOG000004852 ProtClustDB:PRK00099
RefSeq:YP_181714.1 ProteinModelPortal:Q3Z7T5 STRING:Q3Z7T5
GeneID:3229745 KEGG:det:DET0991 PATRIC:21609031
BioCyc:DETH243164:GJNF-992-MONOMER Uniprot:Q3Z7T5
Length = 176
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 39/147 (26%), Positives = 63/147 (42%)
Query: 70 YKGFTVKQFQDLRRSLPE-NTKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAWLFVHTEE 128
Y+G + + +R L E V KNTL +A + T +K G A + + +
Sbjct: 31 YRGISTSELTTIRMKLREAGVGYRVLKNTLARRAADNTDHANIKSAFEGPVAMAY-SSSD 89
Query: 129 IPAAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAKLLGALQGS 188
+ A K ++ K G K + + L +P+R + +K+L +Q
Sbjct: 90 VVAPAKVLMDYLAGSK-STLKVTGGYLSNKLISVEEVAELAKLPSREVLISKVLAGMQSP 148
Query: 189 AIGLVGTLQAPARDLLMVLKAYAKKLE 215
GL L PAR L +VL+A K+LE
Sbjct: 149 IAGLAMVLNGPARGLAVVLQARMKQLE 175
>TIGR_CMR|GSU_2865 [details] [associations]
symbol:GSU_2865 "ribosomal protein L10" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00362
InterPro:IPR001790 InterPro:IPR002363 Pfam:PF00466 PROSITE:PS01109
GO:GO:0006412 GO:GO:0042254 GO:GO:0005840 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 eggNOG:COG0244 KO:K02864
InterPro:IPR022973 PANTHER:PTHR11560:SF8 HOGENOM:HOG000004852
ProtClustDB:PRK00099 OMA:EGTDFEC RefSeq:NP_953907.1
ProteinModelPortal:Q748Y4 GeneID:2686766 KEGG:gsu:GSU2865
PATRIC:22028581 BioCyc:GSUL243231:GH27-2846-MONOMER Uniprot:Q748Y4
Length = 174
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 42/154 (27%), Positives = 64/154 (41%)
Query: 59 LENCHLIAAIKYKGFTVKQFQDLRRSLPENT-KLIVAKNTLVYKAIEGTQWEALKPCMSG 117
L+ + ++G V+Q LR L + V KNTL+ A T E+L +G
Sbjct: 17 LQRAKAVFLADFRGMNVEQATTLRNELRSAAVEYKVVKNTLLELASRDTDKESLSQHFAG 76
Query: 118 MNAWLFVHTEEIPAAIKPYRNFQKEKKLEENDFA--GAVFEGKFYAPGDFKALESMPTRA 175
A + + + AA + K K + N F V GK + D ++L +P+R
Sbjct: 77 PTAIALSYDDPVSAA----KVLSKFAKTQPNTFKLKAGVLTGKAISVADIQSLADLPSRE 132
Query: 176 EIYAKLLGALQGSAIGLVGTLQAPARDLLMVLKA 209
+ AKLLG + VG L A + L A
Sbjct: 133 VLIAKLLGTINAPVANFVGVLAAVPGSFVRALNA 166
>TIGR_CMR|CPS_4771 [details] [associations]
symbol:CPS_4771 "ribosomal protein L10" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00362 InterPro:IPR001790 Pfam:PF00466 PROSITE:PS01109
GO:GO:0042254 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0244 KO:K02864 InterPro:IPR022973 PANTHER:PTHR11560:SF8
ProtClustDB:PRK00099 RefSeq:YP_271415.1 ProteinModelPortal:Q47UV7
STRING:Q47UV7 GeneID:3522127 KEGG:cps:CPS_4771 PATRIC:21472359
HOGENOM:HOG000004851 OMA:EGTDFEC
BioCyc:CPSY167879:GI48-4777-MONOMER Uniprot:Q47UV7
Length = 164
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 63 HLIAAIKYKGFTVKQFQDLRRSLPEN-TKLIVAKNTLVYKAIEGTQWEALKPCMSGMNAW 121
H + +G V+ LR+ EN + V +NTL +A+EGT++E + G +
Sbjct: 23 HSVVIADARGVAVEAITVLRKQARENGVWMKVVRNTLARRAVEGTEFECVSDVFKGPS-- 80
Query: 122 LFVHTEEIP-AAIKPYRNFQKEKKLEENDFAGAVFEGKFYAPGDFKALESMPTRAEIYAK 180
L + + P AA + + +F K E + A FEG D L +PT E ++
Sbjct: 81 LIAFSSDHPGAAARLFTDFAKAN--ENFELKAAAFEGNAV---DVNMLAKLPTYDEAISR 135
Query: 181 LLGALQGSAIGLVGTLQAPARD 202
L+ ++ ++ G + A RD
Sbjct: 136 LMSVMKEASAGKLARTFAAIRD 157
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 220 195 0.00078 111 3 11 22 0.47 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 603 (64 KB)
Total size of DFA: 168 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.25u 0.11s 18.36t Elapsed: 00:00:01
Total cpu time: 18.26u 0.11s 18.37t Elapsed: 00:00:01
Start: Sat May 11 06:13:06 2013 End: Sat May 11 06:13:07 2013