Query 027715
Match_columns 220
No_of_seqs 73 out of 75
Neff 2.9
Searched_HMMs 13730
Date Tue Mar 26 00:10:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027715.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027715hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f1ca_ a.3.1.1 (A:) Photosyst 46.4 6 0.00044 26.9 2.6 17 157-177 102-119 (129)
2 d1mz4a_ a.3.1.1 (A:) Cytochrom 45.1 6.4 0.00046 26.9 2.6 16 157-176 104-120 (131)
3 d1cora_ a.3.1.1 (A:) Cytochrom 36.1 12 0.00085 23.8 2.7 18 156-177 63-80 (82)
4 d2fkia1 d.198.3.1 (A:1-118) Hy 34.9 13 0.00091 26.3 2.9 40 111-150 1-42 (118)
5 d1e29a_ a.3.1.1 (A:) Photosyst 31.7 14 0.001 25.3 2.7 16 157-176 104-120 (135)
6 d1kp0a1 c.55.2.1 (A:1-156) Cre 23.9 28 0.002 24.0 3.1 34 157-190 17-56 (156)
7 d351ca_ a.3.1.1 (A:) Cytochrom 22.2 32 0.0023 21.6 2.9 18 156-177 63-80 (82)
8 d1ztwa1 e.8.1.2 (A:24-278) MML 20.9 28 0.002 27.0 2.8 22 159-180 208-229 (255)
9 d1dlya_ a.1.1.1 (A:) Protozoan 20.6 78 0.0057 20.8 4.9 33 156-188 72-104 (121)
10 d1chma1 c.55.2.1 (A:2-156) Cre 20.6 37 0.0027 23.4 3.2 34 158-191 17-56 (155)
11 d1edga_ c.1.8.3 (A:) Endogluca 20.6 15 0.0011 29.2 1.2 39 140-179 75-114 (380)
No 1
>d1f1ca_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Arthrospira maxima [TaxId: 129910]}
Probab=46.44 E-value=6 Score=26.86 Aligned_cols=17 Identities=24% Similarity=0.411 Sum_probs=14.4
Q ss_pred CC-CCHHHHHHHHHHHHHHHHh
Q 027715 157 FP-LTEEEYILRLDDVANTLKC 177 (220)
Q Consensus 157 FP-LtE~EYlehLd~VAe~Ln~ 177 (220)
|+ ||++| |.+|+.||..
T Consensus 102 ~~~Lsded----i~ai~aYi~~ 119 (129)
T d1f1ca_ 102 MRNISEDD----LYNVAGYILL 119 (129)
T ss_dssp GSSCCHHH----HHHHHHHHHH
T ss_pred cccCCHHH----HHHHHHHHHH
Confidence 44 99998 9999999876
No 2
>d1mz4a_ a.3.1.1 (A:) Cytochrome c550 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=45.08 E-value=6.4 Score=26.87 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=12.4
Q ss_pred CC-CCHHHHHHHHHHHHHHHH
Q 027715 157 FP-LTEEEYILRLDDVANTLK 176 (220)
Q Consensus 157 FP-LtE~EYlehLd~VAe~Ln 176 (220)
|+ ||++| |.+|+.||.
T Consensus 104 f~~Lsdee----i~av~aYi~ 120 (131)
T d1mz4a_ 104 MRNLTEKD----LVAIAGHIL 120 (131)
T ss_dssp GTTCCHHH----HHHHHHHHH
T ss_pred ccCCCHHH----HHHHHHHHH
Confidence 44 99876 788999983
No 3
>d1cora_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas stutzeri [TaxId: 316]}
Probab=36.08 E-value=12 Score=23.81 Aligned_cols=18 Identities=33% Similarity=0.333 Sum_probs=14.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh
Q 027715 156 SFPLTEEEYILRLDDVANTLKC 177 (220)
Q Consensus 156 SFPLtE~EYlehLd~VAe~Ln~ 177 (220)
+|.||++| +.+||+||..
T Consensus 63 ~~~lsdee----i~~la~Yi~S 80 (82)
T d1cora_ 63 PNPVTEEE----AKILAEWILS 80 (82)
T ss_dssp CCSCCHHH----HHHHHHHHHS
T ss_pred ccCCCHHH----HHHHHHHHHh
Confidence 46799987 7889999875
No 4
>d2fkia1 d.198.3.1 (A:1-118) Hypothetical protein YjbR {Escherichia coli [TaxId: 562]}
Probab=34.85 E-value=13 Score=26.29 Aligned_cols=40 Identities=15% Similarity=-0.039 Sum_probs=27.7
Q ss_pred ccHHHHHHHHHHHhCccccceeEE--EeecCcceEEEeeehh
Q 027715 111 FSGLDLATLIRKKYGRSYDVQLIK--KEFMGRNLLALNVMWK 150 (220)
Q Consensus 111 mtG~EL~~LL~~KWG~sYDvqL~r--~~~~Gk~~lyLqVMWk 150 (220)
||..||+++++..-|...|.++-. ..|.-++++|.-+.+.
T Consensus 1 Mt~~el~~~clslpga~e~~p~g~~~~~fkv~gK~FA~~~~~ 42 (118)
T d2fkia1 1 MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEV 42 (118)
T ss_dssp CCHHHHHHHHTTSTTCEEEEETTTTEEEEESSSCEEEEECCB
T ss_pred CCHHHHHHHHHhCCCCEeeCCCCCceEEEEECCEEEEEEEcC
Confidence 899999999999999988877510 1122224488766653
No 5
>d1e29a_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Synechocystis sp., pcc 6803 [TaxId: 1143]}
Probab=31.72 E-value=14 Score=25.30 Aligned_cols=16 Identities=31% Similarity=0.337 Sum_probs=13.1
Q ss_pred CC-CCHHHHHHHHHHHHHHHH
Q 027715 157 FP-LTEEEYILRLDDVANTLK 176 (220)
Q Consensus 157 FP-LtE~EYlehLd~VAe~Ln 176 (220)
|+ ||++| +.+||.||.
T Consensus 104 ~~~Lsded----i~~vaaYi~ 120 (135)
T d1e29a_ 104 MRNYTEDD----IFDVAGYTL 120 (135)
T ss_dssp GTTCCHHH----HHHHHHHHH
T ss_pred cCCCCHHH----HHHHHHHHH
Confidence 44 99987 889999985
No 6
>d1kp0a1 c.55.2.1 (A:1-156) Creatinase {Actinobacillus sp. [TaxId: 41114]}
Probab=23.86 E-value=28 Score=24.04 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=26.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCch------HHHHHHHHh
Q 027715 157 FPLTEEEYILRLDDVANTLKCWGAV------SHIRNSLAK 190 (220)
Q Consensus 157 FPLtE~EYlehLd~VAe~Ln~wG~~------d~Vr~~L~~ 190 (220)
=|.|++||..+++.+-+.+..=|-- ..=..||..
T Consensus 17 ~pFs~~E~~~R~~klr~~M~e~~iDallit~~~ni~YlTG 56 (156)
T d1kp0a1 17 TPFSZAEMTRRZBRLRAWMAKSBIDAVLFTSYHNINYYSG 56 (156)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTCSEEEECSHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEcCcccCeeecC
Confidence 6889999999999999999886532 233466766
No 7
>d351ca_ a.3.1.1 (A:) Cytochrome c551 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.20 E-value=32 Score=21.64 Aligned_cols=18 Identities=11% Similarity=0.204 Sum_probs=13.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh
Q 027715 156 SFPLTEEEYILRLDDVANTLKC 177 (220)
Q Consensus 156 SFPLtE~EYlehLd~VAe~Ln~ 177 (220)
+|+||++| +.+||.||..
T Consensus 63 ~~~lsd~e----i~~la~Yi~S 80 (82)
T d351ca_ 63 PNAVSDDE----AQTLAKWVLS 80 (82)
T ss_dssp CCSCCHHH----HHHHHHHHHT
T ss_pred ccCCCHHH----HHHHHHHHHh
Confidence 46799976 5788888865
No 8
>d1ztwa1 e.8.1.2 (A:24-278) MMLV reverse transcriptase {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=20.92 E-value=28 Score=27.05 Aligned_cols=22 Identities=18% Similarity=0.084 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHHHHHhcCc
Q 027715 159 LTEEEYILRLDDVANTLKCWGA 180 (220)
Q Consensus 159 LtE~EYlehLd~VAe~Ln~wG~ 180 (220)
-|++|+++||++|.+.|..+|-
T Consensus 208 ~t~~eh~~~l~~vl~~l~~~gl 229 (255)
T d1ztwa1 208 TSELDCQQGTRALLQTLGNLGY 229 (255)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHCcC
Confidence 5899999999999999998875
No 9
>d1dlya_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Green alga (Chlamydomonas eugametos) [TaxId: 3054]}
Probab=20.65 E-value=78 Score=20.77 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=28.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCchHHHHHHH
Q 027715 156 SFPLTEEEYILRLDDVANTLKCWGAVSHIRNSL 188 (220)
Q Consensus 156 SFPLtE~EYlehLd~VAe~Ln~wG~~d~Vr~~L 188 (220)
++++|+.+|-.=++-..+.|...|..+..+.-+
T Consensus 72 ~~~i~~~~f~~~~~~l~~al~~~~v~~~~~~e~ 104 (121)
T d1dlya_ 72 VPHLSDVHFQAVARHLSDTLTELGVPPEDITDA 104 (121)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 568999999999999999999998887766554
No 10
>d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]}
Probab=20.64 E-value=37 Score=23.44 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCch------HHHHHHHHhc
Q 027715 158 PLTEEEYILRLDDVANTLKCWGAV------SHIRNSLAKL 191 (220)
Q Consensus 158 PLtE~EYlehLd~VAe~Ln~wG~~------d~Vr~~L~~T 191 (220)
|+|++||..+++.+.+.|..=|.- ..=..||...
T Consensus 17 ~fs~~E~~~Rl~klr~~m~~~giDalli~~~~ni~YlTGf 56 (155)
T d1chma1 17 TFSAQEYANRQARLRAHLAAENIDAAIFTSYHNINYYSDF 56 (155)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEeccccceeecCc
Confidence 689999999999999999987753 2234667654
No 11
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]}
Probab=20.58 E-value=15 Score=29.23 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=26.3
Q ss_pred cceEEEeeehhh-hcccCCCCCHHHHHHHHHHHHHHHHhcC
Q 027715 140 RNLLALNVMWKY-MEQRSFPLTEEEYILRLDDVANTLKCWG 179 (220)
Q Consensus 140 k~~lyLqVMWky-LEQrSFPLtE~EYlehLd~VAe~Ln~wG 179 (220)
.+.|=+=|-|.. ++-..|.++ ++|+.+|+.|+++...-|
T Consensus 75 fn~vRiPv~w~~~~~~~~~~i~-~~~l~~v~~vV~~a~~~G 114 (380)
T d1edga_ 75 FNTVRIPVSWHPHVSGSDYKIS-DVWMNRVQEVVNYCIDNK 114 (380)
T ss_dssp CCEEEECCCCGGGEETTTTEEC-HHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEcccHHHhcCCCCCccC-HHHHHHHHHHHHHHHHcC
Confidence 333334455544 555557777 579999999999887655
Done!