BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027719
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70315|WASP_MOUSE Wiskott-Aldrich syndrome protein homolog OS=Mus musculus GN=Was
PE=1 SV=1
Length = 520
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 98 EIGYPTDVKHVAHIGWDGQSG 118
+IG P+ KHV+H+GWD Q+G
Sbjct: 239 DIGAPSGFKHVSHVGWDPQNG 259
>sp|P42768|WASP_HUMAN Wiskott-Aldrich syndrome protein OS=Homo sapiens GN=WAS PE=1 SV=4
Length = 502
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 98 EIGYPTDVKHVAHIGWDGQSG 118
+IG P+ KHV+H+GWD Q+G
Sbjct: 237 DIGAPSGFKHVSHVGWDPQNG 257
>sp|Q08966|PCL8_YEAST PHO85 cyclin-8 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL8 PE=1 SV=1
Length = 492
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 63 HRVVIRTPRMATK-MKGIYKSFKYISQIFVVKER---EMEIGYPTDVKHVAHIGWDGQSG 118
HR++I T R+ATK ++ S YI ++F + +R ++EI + +A + +DG
Sbjct: 417 HRIIISTIRIATKLLEDFVHSQNYICKVFGISKRLLTKLEISF------MASVNFDGLMI 470
Query: 119 SAPSWMNEFKAAPDFTSSIGN 139
+ D ++GN
Sbjct: 471 TCEKLEKTLHILDDTRQALGN 491
>sp|O08816|WASL_RAT Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus
GN=Wasl PE=1 SV=2
Length = 501
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 98 EIGYPTDVKHVAHIGWDGQSG 118
+IG P++ +H+ H+GWD +G
Sbjct: 199 DIGTPSNFQHIGHVGWDPNTG 219
>sp|Q91YD9|WASL_MOUSE Neural Wiskott-Aldrich syndrome protein OS=Mus musculus GN=Wasl
PE=1 SV=1
Length = 501
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 98 EIGYPTDVKHVAHIGWDGQSG 118
+IG P++ +H+ H+GWD +G
Sbjct: 199 DIGTPSNFQHIGHVGWDPNTG 219
>sp|O00401|WASL_HUMAN Neural Wiskott-Aldrich syndrome protein OS=Homo sapiens GN=WASL
PE=1 SV=2
Length = 505
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 98 EIGYPTDVKHVAHIGWDGQSG 118
+IG P++ +H+ H+GWD +G
Sbjct: 202 DIGTPSNFQHIGHVGWDPNTG 222
>sp|Q95107|WASL_BOVIN Neural Wiskott-Aldrich syndrome protein OS=Bos taurus GN=WASL PE=1
SV=1
Length = 505
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 98 EIGYPTDVKHVAHIGWDGQSG 118
+IG P++ +H+ H+GWD +G
Sbjct: 202 DIGTPSNFQHIGHVGWDPNTG 222
>sp|Q54B51|PKS44_DICDI Probable polyketide synthase 44 OS=Dictyostelium discoideum
GN=pks44 PE=3 SV=1
Length = 3078
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 112 GWDGQSGSAPSWMNEFKAAPDFTSSIGNPVDSSPWSSQDFEQQMGQQPASELFKDILPTD 171
G+DG + W + F A + +S +D W S D LF I+PT+
Sbjct: 39 GFDGIVETTNRWSDSFSAMDEISSKYAGLIDLDEWMSFD-----------PLFFGIIPTE 87
Query: 172 LPKIPKKQKRKKKSS 186
+P I +Q+ K +
Sbjct: 88 VPSIDPQQRLLLKCT 102
>sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio GN=dla PE=1 SV=1
Length = 772
Score = 32.0 bits (71), Expect = 3.2, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 171 DLPKIPKKQKRKKKSSNNSPKSSSSSSRSSRAAKTKATYSEMEKSNIQM 219
D + ++++RK+ S+ S KS S SR S + +++ YSE + S++ +
Sbjct: 682 DSSECTEEKRRKRLKSDASEKSKYSESRYSESKYSESKYSESKYSDVSL 730
>sp|Q8L3W1|VRN1_ARATH B3 domain-containing transcription factor VRN1 OS=Arabidopsis
thaliana GN=VRN1 PE=1 SV=1
Length = 341
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 11/58 (18%)
Query: 169 PTDLPKIPKKQKRKKKSS-----------NNSPKSSSSSSRSSRAAKTKATYSEMEKS 215
PT PKIPKK+ RKKK++ ++ P++ S S+ A K T E E++
Sbjct: 173 PTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERA 230
>sp|P32020|NLTP_MOUSE Non-specific lipid-transfer protein OS=Mus musculus GN=Scp2 PE=1
SV=3
Length = 547
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 88 QIFVVKEREMEIGYPTDVKHVAHIGWDGQSGSAPSWMNEF----------KAAP--DFTS 135
Q+F +E Y T V+H A IGW S + ++F K+ P DF +
Sbjct: 161 QMFGYAGKEHMEKYGTKVEHFAKIGWKNHKHSVNNTYSQFQDEYSLEEVMKSKPVFDFLT 220
Query: 136 SI-----GNPVDSSPWSSQDFEQQMG-QQPASELFKDILPTDLP 173
+ + ++ SS++F QQ G Q A E+ + TDLP
Sbjct: 221 ILQCCPTSDGAAAAILSSEEFVQQYGLQSKAVEIVAQEMMTDLP 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.125 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,321,060
Number of Sequences: 539616
Number of extensions: 3100057
Number of successful extensions: 19806
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 18222
Number of HSP's gapped (non-prelim): 1111
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)