Query 027723
Match_columns 219
No_of_seqs 117 out of 724
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 14:12:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027723.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027723hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 8.3E-43 1.8E-47 324.9 16.1 212 2-216 239-459 (464)
2 PF03016 Exostosin: Exostosin 100.0 3.2E-35 6.9E-40 256.7 12.6 162 2-170 132-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 1.1E-21 2.4E-26 181.7 9.0 176 13-190 305-508 (907)
4 KOG1022 Acetylglucosaminyltran 99.6 1.4E-15 3E-20 140.8 9.1 167 14-185 214-385 (691)
5 PF00852 Glyco_transf_10: Glyc 97.9 2.2E-05 4.8E-10 71.2 7.1 151 15-177 140-304 (349)
6 cd03801 GT1_YqgM_like This fam 97.7 0.00056 1.2E-08 58.1 11.5 96 95-193 266-364 (374)
7 PLN02871 UDP-sulfoquinovose:DA 97.5 0.00065 1.4E-08 63.3 10.4 97 95-194 322-423 (465)
8 PF00534 Glycos_transf_1: Glyc 97.5 0.00055 1.2E-08 54.3 8.3 86 95-183 83-170 (172)
9 cd03814 GT1_like_2 This family 97.4 0.00048 1E-08 59.5 7.5 95 95-192 257-353 (364)
10 cd03821 GT1_Bme6_like This fam 97.4 0.0019 4E-08 55.6 10.7 93 95-192 272-367 (375)
11 cd03820 GT1_amsD_like This fam 97.3 0.00079 1.7E-08 57.1 7.7 96 95-192 243-340 (348)
12 cd03822 GT1_ecORF704_like This 97.3 0.00075 1.6E-08 58.5 7.6 95 95-193 258-356 (366)
13 cd03794 GT1_wbuB_like This fam 97.3 0.0037 7.9E-08 53.9 11.5 95 95-192 285-387 (394)
14 cd03818 GT1_ExpC_like This fam 97.3 0.0034 7.4E-08 56.8 11.5 95 95-192 291-388 (396)
15 TIGR03449 mycothiol_MshA UDP-N 97.2 0.0041 9E-08 56.1 11.4 96 95-193 293-390 (405)
16 cd05844 GT1_like_7 Glycosyltra 97.2 0.0061 1.3E-07 53.6 11.9 96 95-193 255-359 (367)
17 cd03809 GT1_mtfB_like This fam 97.1 0.0034 7.4E-08 54.3 9.6 94 95-193 263-358 (365)
18 TIGR03088 stp2 sugar transfera 97.1 0.0073 1.6E-07 53.8 11.6 96 95-193 263-361 (374)
19 cd04962 GT1_like_5 This family 97.0 0.0031 6.8E-08 55.5 7.8 95 95-192 261-358 (371)
20 cd03823 GT1_ExpE7_like This fa 97.0 0.0083 1.8E-07 51.5 10.2 89 95-186 253-344 (359)
21 cd03819 GT1_WavL_like This fam 96.9 0.0035 7.5E-08 54.7 7.9 95 95-192 254-353 (355)
22 PRK15427 colanic acid biosynth 96.9 0.013 2.8E-07 53.9 11.8 96 95-193 289-394 (406)
23 cd03798 GT1_wlbH_like This fam 96.9 0.008 1.7E-07 51.3 9.5 96 95-193 269-365 (377)
24 cd03808 GT1_cap1E_like This fa 96.9 0.0044 9.6E-08 52.7 7.7 95 95-192 254-351 (359)
25 cd03800 GT1_Sucrose_synthase T 96.8 0.0037 8.1E-08 55.4 6.8 96 95-193 293-391 (398)
26 cd04951 GT1_WbdM_like This fam 96.7 0.027 5.9E-07 48.9 11.4 93 95-192 253-348 (360)
27 PRK10307 putative glycosyl tra 96.7 0.015 3.2E-07 52.9 9.9 96 95-193 294-396 (412)
28 cd03807 GT1_WbnK_like This fam 96.7 0.02 4.3E-07 48.9 10.2 94 95-193 259-355 (365)
29 cd03804 GT1_wbaZ_like This fam 96.6 0.011 2.4E-07 52.1 8.4 93 95-192 252-344 (351)
30 cd03805 GT1_ALG2_like This fam 96.5 0.034 7.3E-07 49.6 11.0 93 96-192 291-386 (392)
31 TIGR02095 glgA glycogen/starch 96.5 0.026 5.6E-07 52.6 10.5 94 95-193 356-461 (473)
32 cd03806 GT1_ALG11_like This fa 96.4 0.045 9.7E-07 50.5 11.5 94 95-192 315-414 (419)
33 KOG2619 Fucosyltransferase [Ca 96.4 0.024 5.3E-07 51.9 9.4 155 14-175 160-321 (372)
34 PRK15484 lipopolysaccharide 1, 96.4 0.036 7.8E-07 50.3 10.5 96 95-193 267-366 (380)
35 PRK09814 beta-1,6-galactofuran 96.4 0.0088 1.9E-07 53.4 6.3 132 49-190 169-317 (333)
36 TIGR02149 glgA_Coryne glycogen 96.2 0.015 3.2E-07 51.8 7.2 96 95-193 271-375 (388)
37 PRK14098 glycogen synthase; Pr 96.2 0.052 1.1E-06 51.4 10.9 94 96-193 373-474 (489)
38 cd03802 GT1_AviGT4_like This f 96.1 0.065 1.4E-06 46.2 10.5 71 95-170 234-305 (335)
39 PRK00654 glgA glycogen synthas 96.1 0.066 1.4E-06 50.0 10.8 92 97-193 349-451 (466)
40 cd04955 GT1_like_6 This family 96.0 0.075 1.6E-06 46.3 10.5 93 95-193 258-353 (363)
41 cd04949 GT1_gtfA_like This fam 95.8 0.029 6.3E-07 49.8 7.1 96 95-192 269-366 (372)
42 cd03799 GT1_amsK_like This is 95.8 0.15 3.3E-06 44.1 11.3 96 95-193 246-350 (355)
43 cd03817 GT1_UGDG_like This fam 95.8 0.23 5E-06 42.5 12.3 92 95-190 269-362 (374)
44 PF13524 Glyco_trans_1_2: Glyc 95.7 0.038 8.3E-07 39.6 6.2 72 116-192 10-84 (92)
45 PRK14099 glycogen synthase; Pr 95.7 0.13 2.9E-06 48.6 11.4 94 96-193 360-467 (485)
46 PRK09922 UDP-D-galactose:(gluc 95.6 0.085 1.8E-06 47.1 9.1 91 96-188 249-343 (359)
47 cd03791 GT1_Glycogen_synthase_ 95.5 0.11 2.4E-06 48.1 10.0 92 96-192 362-464 (476)
48 cd03816 GT1_ALG1_like This fam 95.4 0.22 4.7E-06 45.8 11.3 86 95-186 305-399 (415)
49 cd03795 GT1_like_4 This family 95.3 0.24 5.3E-06 42.9 11.0 95 95-192 254-354 (357)
50 cd03796 GT1_PIG-A_like This fa 95.3 0.15 3.4E-06 46.1 10.0 94 95-193 260-356 (398)
51 PLN02949 transferase, transfer 95.2 0.34 7.3E-06 45.7 12.0 94 96-193 346-445 (463)
52 cd04946 GT1_AmsK_like This fam 95.1 0.38 8.3E-06 44.1 11.9 94 96-192 300-399 (407)
53 TIGR02472 sucr_P_syn_N sucrose 95.0 0.068 1.5E-06 49.4 6.7 95 96-193 328-429 (439)
54 TIGR03087 stp1 sugar transfera 94.8 0.13 2.9E-06 46.6 7.9 91 97-193 290-385 (397)
55 PHA01633 putative glycosyl tra 94.7 0.097 2.1E-06 47.4 6.7 95 95-192 214-327 (335)
56 cd03792 GT1_Trehalose_phosphor 94.6 0.16 3.4E-06 45.4 7.9 93 96-193 265-360 (372)
57 cd03825 GT1_wcfI_like This fam 94.6 0.17 3.8E-06 43.9 7.9 95 95-192 255-352 (365)
58 cd03811 GT1_WabH_like This fam 94.2 0.25 5.5E-06 41.6 8.0 90 96-188 255-350 (353)
59 KOG1387 Glycosyltransferase [C 93.8 0.53 1.1E-05 43.2 9.4 93 96-189 348-443 (465)
60 cd03813 GT1_like_3 This family 93.8 0.22 4.9E-06 46.6 7.4 95 95-192 361-464 (475)
61 PHA01630 putative group 1 glyc 93.4 0.24 5.3E-06 44.5 6.7 41 95-136 200-240 (331)
62 PRK15490 Vi polysaccharide bio 93.3 0.83 1.8E-05 44.3 10.5 94 96-192 464-563 (578)
63 cd03793 GT1_Glycogen_synthase_ 93.0 0.32 6.9E-06 47.2 7.1 98 95-193 465-575 (590)
64 PLN02939 transferase, transfer 92.7 0.77 1.7E-05 47.1 9.6 91 99-193 851-955 (977)
65 TIGR02468 sucrsPsyn_pln sucros 91.5 0.54 1.2E-05 48.6 7.0 94 97-193 560-659 (1050)
66 smart00672 CAP10 Putative lipo 90.3 3.9 8.5E-05 35.6 10.5 140 44-188 79-231 (256)
67 PF13692 Glyco_trans_1_4: Glyc 89.9 0.47 1E-05 35.7 4.0 69 96-169 62-131 (135)
68 TIGR01133 murG undecaprenyldip 89.1 1.1 2.3E-05 39.3 6.2 83 97-184 243-334 (348)
69 cd04950 GT1_like_1 Glycosyltra 88.8 0.68 1.5E-05 41.7 4.8 68 95-169 264-336 (373)
70 PLN02316 synthase/transferase 88.0 5.8 0.00013 41.3 11.2 93 100-194 915-1023(1036)
71 PLN02605 monogalactosyldiacylg 87.8 8.3 0.00018 34.8 11.3 80 96-185 274-362 (382)
72 TIGR02918 accessory Sec system 85.8 11 0.00024 35.9 11.2 94 96-192 384-487 (500)
73 PRK13608 diacylglycerol glucos 84.5 4.6 9.9E-05 36.8 7.8 84 96-188 265-355 (391)
74 cd01635 Glycosyltransferase_GT 84.4 7.2 0.00016 30.8 8.2 41 95-136 172-212 (229)
75 PLN00142 sucrose synthase 84.2 3.5 7.5E-05 41.8 7.3 91 100-193 661-759 (815)
76 cd03812 GT1_CapH_like This fam 84.2 3.1 6.6E-05 36.1 6.3 72 95-170 257-328 (358)
77 PRK10125 putative glycosyl tra 83.7 3.9 8.5E-05 37.7 7.0 68 95-166 297-364 (405)
78 PF05686 Glyco_transf_90: Glyc 83.4 6.1 0.00013 36.6 8.1 138 45-186 154-298 (395)
79 cd03788 GT1_TPS Trehalose-6-Ph 83.2 1.8 3.9E-05 40.6 4.7 90 95-189 351-446 (460)
80 COG0438 RfaG Glycosyltransfera 81.6 3.9 8.4E-05 33.7 5.7 95 96-193 268-365 (381)
81 PRK15179 Vi polysaccharide bio 81.4 15 0.00033 36.6 10.5 93 96-193 583-682 (694)
82 PRK00726 murG undecaprenyldiph 80.6 3.7 8.1E-05 36.3 5.5 85 96-184 244-337 (357)
83 TIGR02470 sucr_synth sucrose s 78.8 7.9 0.00017 39.2 7.6 86 106-194 645-737 (784)
84 TIGR00236 wecB UDP-N-acetylglu 77.6 42 0.00091 29.8 11.4 95 94-208 264-361 (365)
85 PRK05749 3-deoxy-D-manno-octul 77.3 3.5 7.6E-05 37.6 4.4 88 97-188 312-405 (425)
86 PLN02275 transferase, transfer 76.6 24 0.00052 31.7 9.6 103 49-167 261-367 (371)
87 TIGR02400 trehalose_OtsA alpha 76.0 9.5 0.00021 35.9 7.0 87 95-187 346-439 (456)
88 PRK13609 diacylglycerol glucos 73.8 14 0.0003 33.1 7.3 83 97-186 266-353 (380)
89 cd03785 GT1_MurG MurG is an N- 71.8 14 0.0003 32.2 6.7 84 96-185 244-338 (350)
90 COG0297 GlgA Glycogen synthase 64.1 73 0.0016 30.5 10.1 145 46-196 291-469 (487)
91 PLN02846 digalactosyldiacylgly 63.3 65 0.0014 30.6 9.6 38 100-138 296-333 (462)
92 PLN03063 alpha,alpha-trehalose 59.3 29 0.00064 35.1 6.9 88 96-188 367-461 (797)
93 cd02133 PA_C5a_like PA_C5a_lik 58.5 27 0.00058 27.2 5.3 43 96-138 39-81 (143)
94 TIGR02094 more_P_ylases alpha- 57.0 1.8E+02 0.004 28.5 11.8 86 48-143 423-518 (601)
95 TIGR03590 PseG pseudaminic aci 57.0 30 0.00065 30.1 5.8 34 95-134 232-265 (279)
96 PLN02501 digalactosyldiacylgly 51.0 57 0.0012 33.0 7.2 38 99-137 613-650 (794)
97 KOG3185 Translation initiation 45.1 20 0.00044 30.3 2.7 32 104-135 20-51 (245)
98 PF13528 Glyco_trans_1_3: Glyc 43.4 83 0.0018 27.1 6.5 114 46-171 191-318 (318)
99 COG0707 MurG UDP-N-acetylgluco 40.2 82 0.0018 28.8 6.1 83 96-186 244-339 (357)
100 COG2247 LytB Putative cell wal 39.5 34 0.00074 31.1 3.4 42 96-139 124-165 (337)
101 PRK14501 putative bifunctional 36.2 59 0.0013 32.4 4.9 91 95-191 352-449 (726)
102 COG2355 Zn-dependent dipeptida 35.0 23 0.00049 32.0 1.6 71 112-182 145-215 (313)
103 PF09851 SHOCT: Short C-termin 34.9 56 0.0012 18.9 2.8 26 158-183 3-30 (31)
104 PF07038 DUF1324: Protein of u 33.7 34 0.00073 22.3 1.8 39 103-144 7-46 (59)
105 PF15582 Imm40: Immunity prote 33.1 54 0.0012 29.1 3.5 62 97-180 261-323 (327)
106 PF06258 Mito_fiss_Elm1: Mitoc 32.3 1.2E+02 0.0025 27.2 5.7 37 95-135 219-255 (311)
107 cd00538 PA PA: Protease-associ 32.0 1.4E+02 0.003 21.8 5.4 70 100-169 42-118 (126)
108 PF05693 Glycogen_syn: Glycoge 28.7 2.7E+02 0.0059 27.7 7.8 98 95-193 460-570 (633)
109 PF09413 DUF2007: Domain of un 28.6 86 0.0019 20.8 3.3 49 120-170 14-65 (67)
110 PF11460 DUF3007: Protein of u 28.5 56 0.0012 24.7 2.5 22 162-183 82-103 (104)
111 cd03786 GT1_UDP-GlcNAc_2-Epime 27.5 2.8E+02 0.006 24.1 7.3 35 97-137 270-304 (363)
112 PF13976 gag_pre-integrs: GAG- 27.1 30 0.00066 22.9 0.8 11 206-216 24-34 (67)
113 cd04936 ACT_AKii-LysC-BS-like_ 25.8 88 0.0019 19.7 2.9 42 118-168 17-58 (63)
114 PF07429 Glyco_transf_56: 4-al 25.7 1.7E+02 0.0036 27.1 5.5 82 94-188 255-336 (360)
115 PRK11865 pyruvate ferredoxin o 23.2 1.1E+02 0.0025 27.3 3.9 78 107-189 209-295 (299)
116 cd02130 PA_ScAPY_like PA_ScAPY 23.1 2.4E+02 0.0051 21.1 5.3 36 103-138 43-78 (122)
117 cd04299 GT1_Glycogen_Phosphory 22.7 7.6E+02 0.017 25.2 10.0 133 47-193 511-678 (778)
118 PRK00025 lpxB lipid-A-disaccha 21.8 1.6E+02 0.0034 26.0 4.6 86 97-189 254-359 (380)
119 COG4641 Uncharacterized protei 20.4 1.1E+02 0.0023 28.4 3.2 71 118-193 277-350 (373)
120 PLN03194 putative disease resi 20.2 5.2E+02 0.011 21.6 8.5 142 49-216 28-181 (187)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=8.3e-43 Score=324.85 Aligned_cols=212 Identities=43% Similarity=0.748 Sum_probs=187.7
Q ss_pred Ccceeeeec-CCCCCCCccC-CcEeeCCCCCCCCCCccc--ccCCCCCCCCceEEEeecc-CCCccHHHHHHHhhcCCCC
Q 027723 2 ANCIRALCN-SDVKQGFVFG-KDVSLPETNVLSPQNPLW--AIGGKPASQRSILAFFAGS-MHGYLRPILLHHWENKDPD 76 (219)
Q Consensus 2 ~n~i~~~~~-~~~~~~~rp~-~DV~iP~~~~~~~~~~~~--~~~~~~~~~R~~L~~F~G~-~~~~~R~~L~~~~~~~~~~ 76 (219)
.+.|+.+|+ +..+..+.++ +||+||+.+..++..... .....+..+|++|+||+|+ .+|.+|..|.++|++ +++
T Consensus 239 ~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~~~iR~~L~~~~~~-~~~ 317 (464)
T KOG1021|consen 239 ISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAPAGGQIRSILLDLWKK-DPD 317 (464)
T ss_pred HHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccccCCcHHHHHHHHhhc-CcC
Confidence 356788999 8889999999 999999987777654432 1234566899999999999 899999999999998 555
Q ss_pred eEEeecCCCCCCCCcccCcchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEc
Q 027723 77 MKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVL 156 (219)
Q Consensus 77 ~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~ 156 (219)
......|+... +.+.+...|.+.|++|+|||||+|+++++.|+||||.+|||||||+|++.+||++++||++|||+|+
T Consensus 318 ~~~~~~~~~g~--~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~ 395 (464)
T KOG1021|consen 318 TEVFVNCPRGK--VSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP 395 (464)
T ss_pred ccccccCCCCc--cccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE
Confidence 56666787532 3345688999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhH-HHHHhcCCHHHHHHHHHHHH-HHhhheeecC--CCCCcCHHHHHHHHHHHHhhhhh
Q 027723 157 ERDIPNL-KNILLSISEKRYRKMQMMVK-KVQQHFLWHP--RPVKYDIFHMILHSIWYNRVFLA 216 (219)
Q Consensus 157 ~~~~~~l-~~~L~~i~~~~~~~mr~~~~-~~~~~f~y~~--~~~~~daf~~~l~~l~~r~~~~~ 216 (219)
+++++++ .++|.+++.+++.+||+++. .+.++|.|.. +.+.+||||++++++|+|+++..
T Consensus 396 ~~~v~~~~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~ 459 (464)
T KOG1021|consen 396 EKDVPELIKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLR 459 (464)
T ss_pred HHHhhhHHHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhcccccc
Confidence 9999998 99999999999999999999 4999999998 88999999999999999999865
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=3.2e-35 Score=256.75 Aligned_cols=162 Identities=34% Similarity=0.582 Sum_probs=126.8
Q ss_pred Ccceeee-ecCC-CCCCCccCCcEeeCCCCCCCCCCcccccCCCCCCCCceEEEeeccCC-------CccHHHHHHHhhc
Q 027723 2 ANCIRAL-CNSD-VKQGFVFGKDVSLPETNVLSPQNPLWAIGGKPASQRSILAFFAGSMH-------GYLRPILLHHWEN 72 (219)
Q Consensus 2 ~n~i~~~-~~~~-~~~~~rp~~DV~iP~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~-------~~~R~~L~~~~~~ 72 (219)
+|.++++ ++++ ...+|||++||++|++...+...........+..+|++|++|+|+.. +.+|..|.+.+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~ 211 (302)
T PF03016_consen 132 NNSIRAVVAFSSFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKS 211 (302)
T ss_pred ccchhheeccCCCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhccc
Confidence 4566666 3444 36889999999999974333211111112456789999999999864 2589999998876
Q ss_pred CCCCeEEeecCCCCCCCCcccCcchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEE
Q 027723 73 KDPDMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFA 152 (219)
Q Consensus 73 ~~~~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fs 152 (219)
.. +..+.. . .....+..+|.+.|++|+|||+|+|+++++.||+|||.+|||||||+|++.|||+++|||++|+
T Consensus 212 ~~-~~~~~~-~-----~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fs 284 (302)
T PF03016_consen 212 DP-DFRCSD-G-----SETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFS 284 (302)
T ss_pred CC-cceeee-c-----ccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEE
Confidence 43 333321 0 0111245679999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCChhhHHHHHhcC
Q 027723 153 VFVLERDIPNLKNILLSI 170 (219)
Q Consensus 153 v~i~~~~~~~l~~~L~~i 170 (219)
|+|+++++++|+++|++|
T Consensus 285 v~v~~~~~~~l~~iL~~i 302 (302)
T PF03016_consen 285 VRVPEADLPELPEILRSI 302 (302)
T ss_pred EEECHHHHHHHHHHHhcC
Confidence 999999999999999986
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.85 E-value=1.1e-21 Score=181.75 Aligned_cols=176 Identities=16% Similarity=0.202 Sum_probs=130.5
Q ss_pred CCCCCccCCcEeeCCCCCCCCCCc--ccccCCCCCCCCceEEEeeccCCC------ccHHHHHHHhhcCC-------CC-
Q 027723 13 VKQGFVFGKDVSLPETNVLSPQNP--LWAIGGKPASQRSILAFFAGSMHG------YLRPILLHHWENKD-------PD- 76 (219)
Q Consensus 13 ~~~~~rp~~DV~iP~~~~~~~~~~--~~~~~~~~~~~R~~L~~F~G~~~~------~~R~~L~~~~~~~~-------~~- 76 (219)
+...||||+|+++|+. .|+... ..++....+.+|+||++|+|.+.+ ..+....++..+-. +-
T Consensus 305 ~~~q~RpgfDl~V~pv--~h~~~e~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~ 382 (907)
T KOG2264|consen 305 YTVQIRPGFDLPVDPV--NHIAVEKNFVELTPLVPFQRKYLITLQGKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIV 382 (907)
T ss_pred eeeeeccCCCcccCcc--cccccCccceecCcccchhhheeEEEEeeecccccccchhhhhHHHhccCCcccccccCceE
Confidence 3567999999999984 454321 233445568899999999997632 12222222222111 11
Q ss_pred -eEEeecCCCCC-----CCCcccCcchHHhhccCccEEEE-eCCCC-----CCchhHHHHHhcCcEeEEeeCCccCCCcc
Q 027723 77 -MKIFGQMPKAK-----GRGKRKGKTDYIQHMKSSKYCIC-AKGYE-----VHSPRVVEAIFYECVPVIISDNFVPPFFE 144 (219)
Q Consensus 77 -~~v~~~~~~~~-----g~~~~~~~~~y~~~~~~S~FCl~-p~G~~-----~~s~Rl~dai~~GCIPVii~d~~~lPF~~ 144 (219)
+.....|.+.. .|..++...+-.+++..|+|||+ |+|++ ..-.|++||+..||||||+++...|||++
T Consensus 383 qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd 462 (907)
T KOG2264|consen 383 QVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQD 462 (907)
T ss_pred EEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHH
Confidence 12233454433 34344567788999999999998 56774 23468999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHHHhhhee
Q 027723 145 ILNWESFAVFVLERDIPNLKNILLSISEKRYRKMQMMVKKVQQHFL 190 (219)
Q Consensus 145 ~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~mr~~~~~~~~~f~ 190 (219)
.|||.+.++++|.+++++++-+|+++.+.++.+||++++-+|+.++
T Consensus 463 ~idWrraal~lPkaR~tE~HFllrs~~dsDll~mRRqGRl~wEtYl 508 (907)
T KOG2264|consen 463 LIDWRRAALRLPKARLTEAHFLLRSFEDSDLLEMRRQGRLFWETYL 508 (907)
T ss_pred HHHHHHHhhhCCccccchHHHHHHhcchhhHHHHHhhhhhhHHHHh
Confidence 9999999999999999999999999999999999997777776644
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.62 E-value=1.4e-15 Score=140.78 Aligned_cols=167 Identities=15% Similarity=0.154 Sum_probs=135.5
Q ss_pred CCCCccCCcEeeCCCCCCCCCCcccccCCCCCCCCceEEEeec-cCCCccHHHHHHHhhcCCCCeEEeecCCCCC----C
Q 027723 14 KQGFVFGKDVSLPETNVLSPQNPLWAIGGKPASQRSILAFFAG-SMHGYLRPILLHHWENKDPDMKIFGQMPKAK----G 88 (219)
Q Consensus 14 ~~~~rp~~DV~iP~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G-~~~~~~R~~L~~~~~~~~~~~~v~~~~~~~~----g 88 (219)
..+||+|+||.||.+..... .....-+..|.+++--.| +.+..+|..|.++....++...++..|.+.. +
T Consensus 214 tW~yr~g~dv~ipv~Sp~~v-----~~~~~~~g~r~~~l~~~q~n~~pr~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~ 288 (691)
T KOG1022|consen 214 TWKYRKGNDVYIPVRSPGNV-----GRAFLYDGSRYRVLQDCQENYGPRIRVSLIELLSKHEERELELPFCLNLSLNSRG 288 (691)
T ss_pred cccccCCCcccccccccccc-----CccccCCccceeeeeccccccchHhHHhHHHHHhhccceEEecchhccccccccc
Confidence 56799999999999743221 111223456666555444 4466799999998887777777777786532 3
Q ss_pred CCcccCcchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHh
Q 027723 89 RGKRKGKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILL 168 (219)
Q Consensus 89 ~~~~~~~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~ 168 (219)
.|.+....+|...+...+||+.-+|.+.+..-+.+-+.+||+|||..|.+.+||.+++||...||+++|..+.++.++|+
T Consensus 289 ~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~~aSv~~~e~~~~~v~~~l~ 368 (691)
T KOG1022|consen 289 VRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWIVASVWCMEYYAGKVMDALL 368 (691)
T ss_pred hhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhhceeeeEEeehhhHHHHHHHhh
Confidence 35555567899999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHH
Q 027723 169 SISEKRYRKMQMMVKKV 185 (219)
Q Consensus 169 ~i~~~~~~~mr~~~~~~ 185 (219)
+++...+.+||.+..-.
T Consensus 369 ~i~~~~i~sl~~r~~~~ 385 (691)
T KOG1022|consen 369 NIETAGICSLQLRRIGS 385 (691)
T ss_pred cchhcchhhhhhhhhhh
Confidence 99999999999865433
No 5
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=97.95 E-value=2.2e-05 Score=71.21 Aligned_cols=151 Identities=12% Similarity=0.197 Sum_probs=74.1
Q ss_pred CCCccCCcEeeCCCCCCCCCCccc--ccCCCCCCCCceEEEeeccCCC-ccHHHHHHHhhcCCCCeEEeecCC-CCCCCC
Q 027723 15 QGFVFGKDVSLPETNVLSPQNPLW--AIGGKPASQRSILAFFAGSMHG-YLRPILLHHWENKDPDMKIFGQMP-KAKGRG 90 (219)
Q Consensus 15 ~~~rp~~DV~iP~~~~~~~~~~~~--~~~~~~~~~R~~L~~F~G~~~~-~~R~~L~~~~~~~~~~~~v~~~~~-~~~g~~ 90 (219)
=+||.+-||.+|+........... .+......+.+..++++.++.+ ..|..+.+.+... -.|..++.|. +..
T Consensus 140 MTYr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~~~~~R~~~~~~L~~~-~~vd~yG~c~~~~~--- 215 (349)
T PF00852_consen 140 MTYRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCNPHSGREEYVRELSKY-IPVDSYGKCGNNNP--- 215 (349)
T ss_dssp ---------------------------------TSSEEEEE--S-S--H-HHHHHHHHHHTT-S-EEE-SSTT--SS---
T ss_pred cccccccccccccccccccccccccccccccccCCCceEEEEeeCcCCcccHHHHHHHHHhh-cCeEccCCCCCCCC---
Confidence 458999999999863221111111 1111122333455566666542 3588888888765 4688888882 211
Q ss_pred cccCcchHHhhccCccEEEEeCCC---CCCchhHHHHHhcCcEeEEee--C-Cc--cCCCcccCCCCcEEEEEcCCChhh
Q 027723 91 KRKGKTDYIQHMKSSKYCICAKGY---EVHSPRVVEAIFYECVPVIIS--D-NF--VPPFFEILNWESFAVFVLERDIPN 162 (219)
Q Consensus 91 ~~~~~~~y~~~~~~S~FCl~p~G~---~~~s~Rl~dai~~GCIPVii~--d-~~--~lPF~~~idw~~fsv~i~~~~~~~ 162 (219)
.......+.+++-||.|+..-. +.-+--||+|+.+|||||+.+ . ++ .+|=...|+.++|. ...+
T Consensus 216 --~~~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df~------s~~~ 287 (349)
T PF00852_consen 216 --CPRDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDFK------SPKE 287 (349)
T ss_dssp --S--S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGSS------SHHH
T ss_pred --cccccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcCC------CHHH
Confidence 1234589999999999999653 456789999999999999999 3 22 25657788877763 5678
Q ss_pred HHHHHhcCC--HHHHHH
Q 027723 163 LKNILLSIS--EKRYRK 177 (219)
Q Consensus 163 l~~~L~~i~--~~~~~~ 177 (219)
|.+.|+.+. ++.+.+
T Consensus 288 La~yl~~l~~n~~~Y~~ 304 (349)
T PF00852_consen 288 LADYLKYLDKNDELYNK 304 (349)
T ss_dssp HHHHHHHHHT-HHHHH-
T ss_pred HHHHHHHHhcCHHHHhh
Confidence 888888873 555543
No 6
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.70 E-value=0.00056 Score=58.11 Aligned_cols=96 Identities=19% Similarity=0.254 Sum_probs=73.1
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..++.+.|.+|.+.++|.-....+..++||+++|| |||.++. -.+.+.+.-....+.++..+..++.+.|..+ .+
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP 342 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh
Confidence 47789999999999999766666778999999997 6777665 3455666667778888888888877777764 56
Q ss_pred HHHHHHHHHHH-HHhhheeecC
Q 027723 173 KRYRKMQMMVK-KVQQHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~-~~~~~f~y~~ 193 (219)
+...+|.++.+ .+.+.+.|+.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~ 364 (374)
T cd03801 343 ELRRRLGEAARERVAERFSWDR 364 (374)
T ss_pred HHHHHHHHHHHHHHHHhcCHHH
Confidence 77788888877 5666666643
No 7
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.55 E-value=0.00065 Score=63.27 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=75.4
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCC---CCcEEEEEcCCChhhHHHHHhcC-
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILN---WESFAVFVLERDIPNLKNILLSI- 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~id---w~~fsv~i~~~~~~~l~~~L~~i- 170 (219)
..+..+.|..+..++.|......+.-++|||++| +|||.++.-- ..++++ ..+..+.++..+..++.+.|..+
T Consensus 322 ~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg--~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll 398 (465)
T PLN02871 322 GDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG--IPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL 398 (465)
T ss_pred HHHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCC--cHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 3578899999999999987766677899999999 8999987432 334443 26778888888888777666554
Q ss_pred -CHHHHHHHHHHHHHHhhheeecCC
Q 027723 171 -SEKRYRKMQMMVKKVQQHFLWHPR 194 (219)
Q Consensus 171 -~~~~~~~mr~~~~~~~~~f~y~~~ 194 (219)
+++...+|.++.++..+.|.|..-
T Consensus 399 ~~~~~~~~~~~~a~~~~~~fsw~~~ 423 (465)
T PLN02871 399 ADPELRERMGAAAREEVEKWDWRAA 423 (465)
T ss_pred hCHHHHHHHHHHHHHHHHhCCHHHH
Confidence 578888999998887788877653
No 8
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.52 E-value=0.00055 Score=54.27 Aligned_cols=86 Identities=22% Similarity=0.233 Sum_probs=58.3
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCC--H
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSIS--E 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~--~ 172 (219)
..+..+.+..|.+.++|......+..+.|||.+|| |||+++ .-.+.+++.=..-.+.++..++.++.+.+..+- +
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~--~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASD--IGGNNEIINDGVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEES--STHHHHHSGTTTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeecc--ccCCceeeccccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 45789999999999999888888899999999999 666666 233334442233456677778888777777653 3
Q ss_pred HHHHHHHHHHH
Q 027723 173 KRYRKMQMMVK 183 (219)
Q Consensus 173 ~~~~~mr~~~~ 183 (219)
+...+|.++.+
T Consensus 160 ~~~~~l~~~~~ 170 (172)
T PF00534_consen 160 ELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 44555555443
No 9
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.44 E-value=0.00048 Score=59.50 Aligned_cols=95 Identities=16% Similarity=0.153 Sum_probs=71.1
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..|.+++.|.........++|||++|| |||.++.-. ..+++.=....+.++..+..++.+.+..+ .+
T Consensus 257 ~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 257 GEELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEAFAAALAALLADP 333 (364)
T ss_pred HHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH
Confidence 45788899999999999887667788999999999 788877432 33444334566777777776666666554 57
Q ss_pred HHHHHHHHHHHHHhhheeec
Q 027723 173 KRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~f~y~ 192 (219)
+.+.+|.++..+..+.+.|.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~ 353 (364)
T cd03814 334 ELRRRMAARARAEAERRSWE 353 (364)
T ss_pred HHHHHHHHHHHHHHhhcCHH
Confidence 88889998888777676664
No 10
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.40 E-value=0.0019 Score=55.58 Aligned_cols=93 Identities=17% Similarity=0.269 Sum_probs=62.7
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..+.+++.|.-....+..++|||++|| |||.++..- ..+.+.- ...+.++.+ ..++.+.+..+ .+
T Consensus 272 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~~~~~~-~~~~~~~~~-~~~~~~~i~~l~~~~ 346 (375)
T cd03821 272 GEDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVP--WQELIEY-GCGWVVDDD-VDALAAALRRALELP 346 (375)
T ss_pred hHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCC--HHHHhhc-CceEEeCCC-hHHHHHHHHHHHhCH
Confidence 34678889999999999766556778999999996 888877432 2333322 444444443 35555555443 35
Q ss_pred HHHHHHHHHHHHH-hhheeec
Q 027723 173 KRYRKMQMMVKKV-QQHFLWH 192 (219)
Q Consensus 173 ~~~~~mr~~~~~~-~~~f~y~ 192 (219)
+...+|.++.++. .++|.|+
T Consensus 347 ~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 347 QRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 7788888887776 6777765
No 11
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.35 E-value=0.00079 Score=57.13 Aligned_cols=96 Identities=16% Similarity=0.188 Sum_probs=70.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|.++.+++.|.........++|||++||-+| .++....+ +++++-....+.++..++.++.+.+..+ ++
T Consensus 243 ~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi-~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~ 320 (348)
T cd03820 243 TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVI-SFDCPTGP-SEIIEDGVNGLLVPNGDVEALAEALLRLMEDE 320 (348)
T ss_pred cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEE-EecCCCch-HhhhccCcceEEeCCCCHHHHHHHHHHHHcCH
Confidence 36788999999999999766556778999999998654 55432222 2334444567778888888777777665 68
Q ss_pred HHHHHHHHHHHHHhhheeec
Q 027723 173 KRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~f~y~ 192 (219)
+...+|.++.++..+.|.|+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~ 340 (348)
T cd03820 321 ELRKRMGANARESAERFSIE 340 (348)
T ss_pred HHHHHHHHHHHHHHHHhCHH
Confidence 88889999888888887765
No 12
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.34 E-value=0.00075 Score=58.47 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=70.6
Q ss_pred cchHHhhccCccEEEEeCCCC--CCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--
Q 027723 95 KTDYIQHMKSSKYCICAKGYE--VHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI-- 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~--~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i-- 170 (219)
..+..+.|+.+.+++.|.... ..+..+.|||++|+ |||.++.-. .+.+.+- ...+.++..+..++.+.|..+
T Consensus 258 ~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~~-~~g~~~~~~d~~~~~~~l~~l~~ 333 (366)
T cd03822 258 DEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLDG-GTGLLVPPGDPAALAEAIRRLLA 333 (366)
T ss_pred HHHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeeeC-CCcEEEcCCCHHHHHHHHHHHHc
Confidence 457889999999999997766 67778999999999 999887433 3333343 345667777777777777654
Q ss_pred CHHHHHHHHHHHHHHhhheeecC
Q 027723 171 SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
.++...+|+++.++..+.|.|+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~s~~~ 356 (366)
T cd03822 334 DPELAQALRARAREYARAMSWER 356 (366)
T ss_pred ChHHHHHHHHHHHHHHhhCCHHH
Confidence 35788889998888877766643
No 13
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.31 E-value=0.0037 Score=53.87 Aligned_cols=95 Identities=13% Similarity=0.103 Sum_probs=67.9
Q ss_pred cchHHhhccCccEEEEeCCCCCC-----chhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVH-----SPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS 169 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~-----s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~ 169 (219)
..++.+.|..+.++++|...+.. ...++|||++|| |||.++.-.. .+.+.=....+.++..+..++.+.|..
T Consensus 285 ~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~i~~ 361 (394)
T cd03794 285 KEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGES--AELVEEAGAGLVVPPGDPEALAAAILE 361 (394)
T ss_pred hHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCc--hhhhccCCcceEeCCCCHHHHHHHHHH
Confidence 45788999999999999766532 456899999997 8887764332 222222256667777788877777776
Q ss_pred C--CHHHHHHHHHHHHHHhh-heeec
Q 027723 170 I--SEKRYRKMQMMVKKVQQ-HFLWH 192 (219)
Q Consensus 170 i--~~~~~~~mr~~~~~~~~-~f~y~ 192 (219)
+ ++++..+|.++..+... +|.|+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 362 LLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred HHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 6 68888888888776655 66664
No 14
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.28 E-value=0.0034 Score=56.82 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=68.2
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..++.+.|..|..++.|.-....+.-++|||++|| |||.++.- +..+++.=..-.+.++..+..+|.+.+..+ .+
T Consensus 291 ~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~ 367 (396)
T cd03818 291 YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREVITDGENGLLVDFFDPDALAAAVIELLDDP 367 (396)
T ss_pred HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--CchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH
Confidence 35678889999999988655444567999999999 88887743 455766656667778888877766665543 46
Q ss_pred HHHHHHHHHHHHHh-hheeec
Q 027723 173 KRYRKMQMMVKKVQ-QHFLWH 192 (219)
Q Consensus 173 ~~~~~mr~~~~~~~-~~f~y~ 192 (219)
+...+|.++.++.. ++|.|+
T Consensus 368 ~~~~~l~~~ar~~~~~~fs~~ 388 (396)
T cd03818 368 ARRARLRRAARRTALRYDLLS 388 (396)
T ss_pred HHHHHHHHHHHHHHHHhccHH
Confidence 67788888777655 447664
No 15
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.23 E-value=0.0041 Score=56.08 Aligned_cols=96 Identities=11% Similarity=0.094 Sum_probs=69.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..+..++.|.=......-++|||++|| |||.++.-- ..+++.=....+.++..+..++.+.|..+ ++
T Consensus 293 ~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~--~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~ 369 (405)
T TIGR03449 293 PEELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGG--LPVAVADGETGLLVDGHDPADWADALARLLDDP 369 (405)
T ss_pred HHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCC--cHhhhccCCceEECCCCCHHHHHHHHHHHHhCH
Confidence 35678899999999998644455678999999996 888877432 23444334556677777887766555443 46
Q ss_pred HHHHHHHHHHHHHhhheeecC
Q 027723 173 KRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+...+|.++.++..+.|.|+.
T Consensus 370 ~~~~~~~~~~~~~~~~fsw~~ 390 (405)
T TIGR03449 370 RTRIRMGAAAVEHAAGFSWAA 390 (405)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 778889888888777777764
No 16
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.20 E-value=0.0061 Score=53.61 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=67.8
Q ss_pred cchHHhhccCccEEEEeCCC------CCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHh
Q 027723 95 KTDYIQHMKSSKYCICAKGY------EVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILL 168 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~------~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~ 168 (219)
..+..+.|..+...+.|.-. ......++|||++|| |||.++.-. ..+.+.=....+.++..+..++.+.|.
T Consensus 255 ~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~ 331 (367)
T cd05844 255 HAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGG--IPEAVEDGETGLLVPEGDVAALAAALG 331 (367)
T ss_pred HHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCC--chhheecCCeeEEECCCCHHHHHHHHH
Confidence 35678889999998888431 224678999999996 999888643 234444456677888888887777665
Q ss_pred cC--CHHHHHHHHHHHHHH-hhheeecC
Q 027723 169 SI--SEKRYRKMQMMVKKV-QQHFLWHP 193 (219)
Q Consensus 169 ~i--~~~~~~~mr~~~~~~-~~~f~y~~ 193 (219)
.+ +++...+|..+.++. .++|.|+.
T Consensus 332 ~l~~~~~~~~~~~~~a~~~~~~~~s~~~ 359 (367)
T cd05844 332 RLLADPDLRARMGAAGRRRVEERFDLRR 359 (367)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHCCHHH
Confidence 54 466677888777654 46777753
No 17
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.15 E-value=0.0034 Score=54.30 Aligned_cols=94 Identities=16% Similarity=0.184 Sum_probs=69.2
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc-C-CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS-I-SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~-i-~~ 172 (219)
..+..+.+..+.+++.|.-....+.-++|||++|+ |||.++.- .+.+.+ .+..+.++..+..++.+.|.. + ++
T Consensus 263 ~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~--~~~e~~--~~~~~~~~~~~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 263 DEELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNIS--SLPEVA--GDAALYFDPLDPEALAAAIERLLEDP 337 (365)
T ss_pred hhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCC--Ccccee--cCceeeeCCCCHHHHHHHHHHHhcCH
Confidence 46778899999999999654445667999999997 77777642 233444 345667777788887777776 3 57
Q ss_pred HHHHHHHHHHHHHhhheeecC
Q 027723 173 KRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+...+|.++.+++.+.|.|+.
T Consensus 338 ~~~~~~~~~~~~~~~~~sw~~ 358 (365)
T cd03809 338 ALREELRERGLARAKRFSWEK 358 (365)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 888888888888888877754
No 18
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.11 E-value=0.0073 Score=53.79 Aligned_cols=96 Identities=18% Similarity=0.085 Sum_probs=69.2
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..+.+.+.|.-......-++|||++|+ |||.+|.-. ..+++.-......++..+..++.+.|..+ ++
T Consensus 263 ~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g--~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 263 RDDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGG--NPELVQHGVTGALVPPGDAVALARALQPYVSDP 339 (374)
T ss_pred cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCC--cHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCH
Confidence 45788999999999998655555678999999996 999988532 34566555667778888887777766654 46
Q ss_pred HHHHHHHHHHHHH-hhheeecC
Q 027723 173 KRYRKMQMMVKKV-QQHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~~~-~~~f~y~~ 193 (219)
+...+|.++.++. .+.|.|..
T Consensus 340 ~~~~~~~~~a~~~~~~~fs~~~ 361 (374)
T TIGR03088 340 AARRAHGAAGRARAEQQFSINA 361 (374)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 6667777666554 46777654
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.97 E-value=0.0031 Score=55.55 Aligned_cols=95 Identities=14% Similarity=0.175 Sum_probs=70.4
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..+..++.|.-......-++|||++| +|||.++.-. ..+++.-..-...++..+..++.+.+..+ ++
T Consensus 261 ~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~ 337 (371)
T cd04962 261 QDHVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGG--IPEVVKHGETGFLVDVGDVEAMAEYALSLLEDD 337 (371)
T ss_pred cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCC--chhhhcCCCceEEcCCCCHHHHHHHHHHHHhCH
Confidence 3467899999999999975555567899999999 7888887543 34566555556667777887776666554 57
Q ss_pred HHHHHHHHHHHHH-hhheeec
Q 027723 173 KRYRKMQMMVKKV-QQHFLWH 192 (219)
Q Consensus 173 ~~~~~mr~~~~~~-~~~f~y~ 192 (219)
+...+|+++.++. .++|.|.
T Consensus 338 ~~~~~~~~~~~~~~~~~fs~~ 358 (371)
T cd04962 338 ELWQEFSRAARNRAAERFDSE 358 (371)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 8888999988876 6676664
No 20
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=96.96 E-value=0.0083 Score=51.53 Aligned_cols=89 Identities=15% Similarity=0.092 Sum_probs=65.2
Q ss_pred cchHHhhccCccEEEEeCC-CCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 027723 95 KTDYIQHMKSSKYCICAKG-YEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--S 171 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G-~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~ 171 (219)
..+..+.|..+..+++|.- .......++|||++| +|||.++.- ...+.++.....+.++..+..++.+.+..+ .
T Consensus 253 ~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 253 QEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLIDD 329 (359)
T ss_pred HHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC
Confidence 4678889999999999963 344567899999999 777777632 345666666678888888887776666554 4
Q ss_pred HHHHHHHHHHHHHHh
Q 027723 172 EKRYRKMQMMVKKVQ 186 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~ 186 (219)
++...+|+++.++..
T Consensus 330 ~~~~~~~~~~~~~~~ 344 (359)
T cd03823 330 PDLLERLRAGIEPPR 344 (359)
T ss_pred hHHHHHHHHhHHHhh
Confidence 777778877765544
No 21
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=96.95 E-value=0.0035 Score=54.70 Aligned_cols=95 Identities=20% Similarity=0.116 Sum_probs=70.2
Q ss_pred cchHHhhccCccEEEEeC-CCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHh-cC--
Q 027723 95 KTDYIQHMKSSKYCICAK-GYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILL-SI-- 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~-G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~-~i-- 170 (219)
..+..+.|..|...+.|. -......-++|||++|+ |||.++. -+..+.+.-....+.++.++..++.+.|. .+
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~ 330 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDH--GGARETVRPGETGLLVPPGDAEALAQALDQILSL 330 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCC--CCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhh
Confidence 567889999999999986 33445678999999999 7887763 34566666666677788888888877773 33
Q ss_pred CHHHHHHHHHHHHHHh-hheeec
Q 027723 171 SEKRYRKMQMMVKKVQ-QHFLWH 192 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~-~~f~y~ 192 (219)
++++..+|.++.++.. .+|.|+
T Consensus 331 ~~~~~~~~~~~a~~~~~~~f~~~ 353 (355)
T cd03819 331 LPEGRAKMFAKARMCVETLFSYD 353 (355)
T ss_pred CHHHHHHHHHHHHHHHHHhhhhc
Confidence 6788888888877655 555553
No 22
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=96.92 E-value=0.013 Score=53.86 Aligned_cols=96 Identities=14% Similarity=0.092 Sum_probs=68.8
Q ss_pred cchHHhhccCccEEEEeCC-----C-CCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHh
Q 027723 95 KTDYIQHMKSSKYCICAKG-----Y-EVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILL 168 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G-----~-~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~ 168 (219)
..+..+.|..+..++.|.= + .....-++|||++|+ |||.++.--. .+++.=..-.+.+++.+..++.+.|.
T Consensus 289 ~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~-PVI~t~~~g~--~E~v~~~~~G~lv~~~d~~~la~ai~ 365 (406)
T PRK15427 289 SHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGI-PVVSTLHSGI--PELVEADKSGWLVPENDAQALAQRLA 365 (406)
T ss_pred HHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCC-CEEEeCCCCc--hhhhcCCCceEEeCCCCHHHHHHHHH
Confidence 4567899999999999842 1 223567999999995 9998875433 35554455667788888888877776
Q ss_pred cC---CHHHHHHHHHHHHH-HhhheeecC
Q 027723 169 SI---SEKRYRKMQMMVKK-VQQHFLWHP 193 (219)
Q Consensus 169 ~i---~~~~~~~mr~~~~~-~~~~f~y~~ 193 (219)
.+ +++...+|.++.++ +.++|.|+.
T Consensus 366 ~l~~~d~~~~~~~~~~ar~~v~~~f~~~~ 394 (406)
T PRK15427 366 AFSQLDTDELAPVVKRAREKVETDFNQQV 394 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 55 67778888888775 446676643
No 23
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=96.89 E-value=0.008 Score=51.27 Aligned_cols=96 Identities=17% Similarity=0.179 Sum_probs=64.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC-CHH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI-SEK 173 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i-~~~ 173 (219)
..+..+.+.++.++++|......+..++|||++|+ |||.++.-. ..+.+.-....+.+...+..++.+.|..+ ...
T Consensus 269 ~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~--~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 269 HEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGG--IPEIITDGENGLLVPPGDPEALAEAILRLLADP 345 (377)
T ss_pred HHHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCC--hHHHhcCCcceeEECCCCHHHHHHHHHHHhcCc
Confidence 45678999999999999776667788999999999 677766422 23445445556677887887766666554 222
Q ss_pred HHHHHHHHHHHHhhheeecC
Q 027723 174 RYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 174 ~~~~mr~~~~~~~~~f~y~~ 193 (219)
+....+++...+.+.|.|+.
T Consensus 346 ~~~~~~~~~~~~~~~~s~~~ 365 (377)
T cd03798 346 WLRLGRAARRRVAERFSWEN 365 (377)
T ss_pred HHHHhHHHHHHHHHHhhHHH
Confidence 22445555556667776653
No 24
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=96.87 E-value=0.0044 Score=52.74 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=67.6
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..+.+++.|.........++|||++|+ |||.++.-.. .+.+.=....+.++.++..++.+.+..+ .+
T Consensus 254 ~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~--~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 254 RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGC--REAVIDGVNGFLVPPGDAEALADAIERLIEDP 330 (359)
T ss_pred cccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCc--hhhhhcCcceEEECCCCHHHHHHHHHHHHhCH
Confidence 45678899999999999776666788999999995 7888764322 3444324556677777887777776654 46
Q ss_pred HHHHHHHHHHHHH-hhheeec
Q 027723 173 KRYRKMQMMVKKV-QQHFLWH 192 (219)
Q Consensus 173 ~~~~~mr~~~~~~-~~~f~y~ 192 (219)
+...+|.++.++. .++|.|+
T Consensus 331 ~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 331 ELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 7778887776665 5665543
No 25
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=96.78 E-value=0.0037 Score=55.38 Aligned_cols=96 Identities=16% Similarity=0.165 Sum_probs=70.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.+..|..+++|.-......-++|||++| +|||.++.- ...+.+.=....+.++..+..++.+.+..+ ++
T Consensus 293 ~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~ 369 (398)
T cd03800 293 REDLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVG--GPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP 369 (398)
T ss_pred HHHHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCC--CHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH
Confidence 3467788999999999976655667899999999 599988742 334555444567778877777776666554 47
Q ss_pred HHHHHHHHHHHHHh-hheeecC
Q 027723 173 KRYRKMQMMVKKVQ-QHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~~~~-~~f~y~~ 193 (219)
+.+.+|.++.++.. ++|.|+.
T Consensus 370 ~~~~~~~~~a~~~~~~~~s~~~ 391 (398)
T cd03800 370 ALRRRLSRAGLRRARARYTWER 391 (398)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 78888888887665 7777653
No 26
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=96.67 E-value=0.027 Score=48.92 Aligned_cols=93 Identities=18% Similarity=0.196 Sum_probs=62.3
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC---C
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI---S 171 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i---~ 171 (219)
..+..+.|..+.+.+.|........-++|||++|| |||.+|.-. ..+.+. +....++..+..++.+.+..+ +
T Consensus 253 ~~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~--~~g~~~~~~~~~~~~~~i~~ll~~~ 327 (360)
T cd04951 253 RDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGG--VREVVG--DSGLIVPISDPEALANKIDEILKMS 327 (360)
T ss_pred cccHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCC--hhhEec--CCceEeCCCCHHHHHHHHHHHHhCC
Confidence 34677889999999999776656778999999999 888877422 223331 134456667777666666554 5
Q ss_pred HHHHHHHHHHHHHHhhheeec
Q 027723 172 EKRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f~y~ 192 (219)
++....|..+-..+.+.|.|+
T Consensus 328 ~~~~~~~~~~~~~~~~~~s~~ 348 (360)
T cd04951 328 GEERDIIGARRERIVKKFSIN 348 (360)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 566666666644556666664
No 27
>PRK10307 putative glycosyl transferase; Provisional
Probab=96.65 E-value=0.015 Score=52.94 Aligned_cols=96 Identities=6% Similarity=0.046 Sum_probs=69.2
Q ss_pred cchHHhhccCccEEEEeCCCCC----CchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC
Q 027723 95 KTDYIQHMKSSKYCICAKGYEV----HSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~----~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i 170 (219)
..+..+.|+.+..++.|.=.+. ....++|+|++| +|||.++.--....+++. ...+.++..+..+|.+.|..+
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l 370 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAAL 370 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHH
Confidence 4577889999999999843221 234589999999 688888743333445666 467778888888888888765
Q ss_pred --CHHHHHHHHHHHHHH-hhheeecC
Q 027723 171 --SEKRYRKMQMMVKKV-QQHFLWHP 193 (219)
Q Consensus 171 --~~~~~~~mr~~~~~~-~~~f~y~~ 193 (219)
+++...+|.++.++. .++|.|+.
T Consensus 371 ~~~~~~~~~~~~~a~~~~~~~fs~~~ 396 (412)
T PRK10307 371 ARQALLRPKLGTVAREYAERTLDKEN 396 (412)
T ss_pred HhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 467788898888864 46788764
No 28
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=96.65 E-value=0.02 Score=48.95 Aligned_cols=94 Identities=13% Similarity=0.129 Sum_probs=64.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..+.+++.|......+.-++|||++|| |||.++.-.. .+.+. +..+.++.++..++.+.+..+ .+
T Consensus 259 ~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~--~e~~~--~~g~~~~~~~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 259 RSDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDN--AELVG--DTGFLVPPGDPEALAEAIEALLADP 333 (365)
T ss_pred cccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCCh--HHHhh--cCCEEeCCCCHHHHHHHHHHHHhCh
Confidence 45678899999999999777666788999999996 7888764221 23221 145566777777666666554 35
Q ss_pred HHHHHHHHHHHHH-hhheeecC
Q 027723 173 KRYRKMQMMVKKV-QQHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~~~-~~~f~y~~ 193 (219)
+...+|.++.++. .+.|.|+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 334 ALRQALGEAARERIEENFSIEA 355 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 6777777766654 45677654
No 29
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=96.58 E-value=0.011 Score=52.11 Aligned_cols=93 Identities=12% Similarity=0.049 Sum_probs=58.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSISEKR 174 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~ 174 (219)
..+..+.|+.+..+++|.- ...+..++|||++|| |||.++.-.. .+++.=.+..+.++.++..++.+.|..+-...
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-Pvi~~~~~~~--~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-PVIAYGKGGA--LETVIDGVTGILFEEQTVESLAAAVERFEKNE 327 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-CEEEeCCCCC--cceeeCCCCEEEeCCCCHHHHHHHHHHHHhCc
Confidence 4568889999999999865 334566899999998 9998874332 24443235577777777776666665442111
Q ss_pred HHHHHHHHHHHhhheeec
Q 027723 175 YRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 175 ~~~mr~~~~~~~~~f~y~ 192 (219)
- ++++++.+..+.|.|+
T Consensus 328 ~-~~~~~~~~~~~~~~~~ 344 (351)
T cd03804 328 D-FDPQAIRAHAERFSES 344 (351)
T ss_pred c-cCHHHHHHHHHhcCHH
Confidence 0 2334444444445443
No 30
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=96.50 E-value=0.034 Score=49.59 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=60.5
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 173 (219)
.+..+.|..+.+++.|........-++|||++| +|||.++.-. ..+.+.-..-.+.++. +..++.+.+..+ .++
T Consensus 291 ~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~--~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~ 366 (392)
T cd03805 291 SQKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG--PLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD 366 (392)
T ss_pred HHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC--cHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH
Confidence 455788999999999876655566789999999 6777776422 1233432333444554 565555555443 356
Q ss_pred HHHHHHHHHHH-Hhhheeec
Q 027723 174 RYRKMQMMVKK-VQQHFLWH 192 (219)
Q Consensus 174 ~~~~mr~~~~~-~~~~f~y~ 192 (219)
...+|+++.++ +.+.|.|.
T Consensus 367 ~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 367 LADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred HHHHHHHHHHHHHHHhcCHH
Confidence 78888887765 45667765
No 31
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=96.47 E-value=0.026 Score=52.65 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=62.1
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccC-CCC-----cEEEEEcCCChhhHHHHHh
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEIL-NWE-----SFAVFVLERDIPNLKNILL 168 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~i-dw~-----~fsv~i~~~~~~~l~~~L~ 168 (219)
.....+.++.+.++++|.-..+...-..|||++||.||+ ++.-- ..+.+ |.+ ...+.+++.+..+|.+.|.
T Consensus 356 ~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg--~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~ 432 (473)
T TIGR02095 356 EALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGG--LADTVVDGDPEAESGTGFLFEEYDPGALLAALS 432 (473)
T ss_pred HHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCC--ccceEecCCCCCCCCceEEeCCCCHHHHHHHHH
Confidence 344567899999999998777777889999999996665 44322 22332 321 5567788888777666654
Q ss_pred cC------CHHHHHHHHHHHHHHhhheeecC
Q 027723 169 SI------SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 169 ~i------~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
.+ .++...+|.++.. .+.|.|+.
T Consensus 433 ~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~ 461 (473)
T TIGR02095 433 RALRLYRQDPSLWEALQKNAM--SQDFSWDK 461 (473)
T ss_pred HHHHHHhcCHHHHHHHHHHHh--ccCCCcHH
Confidence 43 4566677766543 35666654
No 32
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.40 E-value=0.045 Score=50.54 Aligned_cols=94 Identities=11% Similarity=0.140 Sum_probs=62.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCC---CCcEEEEEcCCChhhHHHHHhc--
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILN---WESFAVFVLERDIPNLKNILLS-- 169 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~id---w~~fsv~i~~~~~~~l~~~L~~-- 169 (219)
..+..+.|+.|..++.|.-....+.-+.|||++||.||.-..+ -|.++++. =.+..+.+. +..++.+.+..
T Consensus 315 ~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~g--gp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll 390 (419)
T cd03806 315 FEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASG--GPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL 390 (419)
T ss_pred HHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCC--CCchheeeccCCCCceEEeC--CHHHHHHHHHHHH
Confidence 4678899999999999876665678899999999977654322 25556553 233333332 55444444333
Q ss_pred -CCHHHHHHHHHHHHHHhhheeec
Q 027723 170 -ISEKRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 170 -i~~~~~~~mr~~~~~~~~~f~y~ 192 (219)
.+++....|+++-+++.++|.|+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 391 SLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred hCCHHHHHHHHHHHHHHHHhhCHH
Confidence 25666667888888888887765
No 33
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.38 E-value=0.024 Score=51.94 Aligned_cols=155 Identities=12% Similarity=0.195 Sum_probs=98.0
Q ss_pred CCCCccCCcEeeCCCCCCCCC-Cccc-ccCCCCCCCCceEEEeeccCC-CccHHHHHHHhhcCCCCeEEeecCCCCCCCC
Q 027723 14 KQGFVFGKDVSLPETNVLSPQ-NPLW-AIGGKPASQRSILAFFAGSMH-GYLRPILLHHWENKDPDMKIFGQMPKAKGRG 90 (219)
Q Consensus 14 ~~~~rp~~DV~iP~~~~~~~~-~~~~-~~~~~~~~~R~~L~~F~G~~~-~~~R~~L~~~~~~~~~~~~v~~~~~~~~g~~ 90 (219)
.-+||.+-|+-.|+.....+. .+.. +....-..+++..+.+..++. ...|..+.+.+... -.+.+++.|-.. .+
T Consensus 160 T~Tyr~dSd~~~pygy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~-l~iD~YG~c~~~--~~ 236 (372)
T KOG2619|consen 160 TMTYRRDSDLFVPYGYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCIPRSARLDYYKELMKH-LEIDSYGECLRK--NA 236 (372)
T ss_pred eEEEeccCCCCCccceEeecccCceecccccccccccceeeeeccccCcchHHHHHHHHHHhh-Cceeeccccccc--cc
Confidence 446889999999986433332 1111 111112456667777777664 35676666655543 457778887421 12
Q ss_pred cccCcchHHhhccCccEEEEeCCC---CCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcC-CChhhHHHH
Q 027723 91 KRKGKTDYIQHMKSSKYCICAKGY---EVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLE-RDIPNLKNI 166 (219)
Q Consensus 91 ~~~~~~~y~~~~~~S~FCl~p~G~---~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~-~~~~~l~~~ 166 (219)
.........+.+.+=||-|+-.-. ..-+.-|+.|+.+|.|||+++...+..| ++ .+..|.|.. ..+.+|.+.
T Consensus 237 ~~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~f---vP-~~SfI~vdDF~s~~ela~y 312 (372)
T KOG2619|consen 237 NRDPSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENF---VP-PDSFIHVDDFQSPQELAAY 312 (372)
T ss_pred cCCCCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCcccccc---CC-CcceEehhhcCCHHHHHHH
Confidence 223456678888899999998654 2346789999999999999998554333 33 444555544 345689999
Q ss_pred HhcCCHHHH
Q 027723 167 LLSISEKRY 175 (219)
Q Consensus 167 L~~i~~~~~ 175 (219)
|+.+...+.
T Consensus 313 lk~L~~n~~ 321 (372)
T KOG2619|consen 313 LKKLDKNPA 321 (372)
T ss_pred HHHhhcCHH
Confidence 998854333
No 34
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=96.36 E-value=0.036 Score=50.30 Aligned_cols=96 Identities=11% Similarity=0.074 Sum_probs=62.6
Q ss_pred cchHHhhccCccEEEEeCCC-CCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEE-EEEcCCChhhHHHHHhc-CC
Q 027723 95 KTDYIQHMKSSKYCICAKGY-EVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFA-VFVLERDIPNLKNILLS-IS 171 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~-~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fs-v~i~~~~~~~l~~~L~~-i~ 171 (219)
..+..+.|+.|..+++|... .....-++|||++| +|||.++.-- ..+++.=.... +.++..+..++.+.|.. ++
T Consensus 267 ~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg--~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~ 343 (380)
T PRK15484 267 PEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGG--ITEFVLEGITGYHLAEPMTSDSIISDINRTLA 343 (380)
T ss_pred HHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCC--cHhhcccCCceEEEeCCCCHHHHHHHHHHHHc
Confidence 34677889999999999753 44556799999999 7999988533 23444222223 34556677666665544 33
Q ss_pred HHHHHHHHHHHHH-HhhheeecC
Q 027723 172 EKRYRKMQMMVKK-VQQHFLWHP 193 (219)
Q Consensus 172 ~~~~~~mr~~~~~-~~~~f~y~~ 193 (219)
+.+..+|.++.++ +.++|.|+.
T Consensus 344 d~~~~~~~~~ar~~~~~~fsw~~ 366 (380)
T PRK15484 344 DPELTQIAEQAKDFVFSKYSWEG 366 (380)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHH
Confidence 3445677777664 457787754
No 35
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.35 E-value=0.0088 Score=53.37 Aligned_cols=132 Identities=17% Similarity=0.279 Sum_probs=84.4
Q ss_pred ceEEEeeccCCCccHHHHHHHhhcCCCCeEEeecCCCCCC------CCcccCcchHHhhccCccEEEEeCCCC-------
Q 027723 49 SILAFFAGSMHGYLRPILLHHWENKDPDMKIFGQMPKAKG------RGKRKGKTDYIQHMKSSKYCICAKGYE------- 115 (219)
Q Consensus 49 ~~L~~F~G~~~~~~R~~L~~~~~~~~~~~~v~~~~~~~~g------~~~~~~~~~y~~~~~~S~FCl~p~G~~------- 115 (219)
+..+.|+|++.. . +.|.+ . ..+-.+.+.+..+.... +.+.....+..+.|.. .|+|++.+++
T Consensus 169 ~~~i~yaG~l~k-~-~~l~~-~-~~~~~l~i~G~g~~~~~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~ 243 (333)
T PRK09814 169 QKKINFAGNLEK-S-PFLKN-W-SQGIKLTVFGPNPEDLENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGE 243 (333)
T ss_pred CceEEEecChhh-c-hHHHh-c-CCCCeEEEECCCccccccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchh
Confidence 346889998751 1 11221 1 11123445554432110 1112234566677766 9999988761
Q ss_pred ----CCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHHHhhhee
Q 027723 116 ----VHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRKMQMMVKKVQQHFL 190 (219)
Q Consensus 116 ----~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~mr~~~~~~~~~f~ 190 (219)
..-..++++|++|+ |||+++.-.++ +++.=....+.++ .+.++.+.|+.++++++.+|+++.+++.+.+-
T Consensus 244 y~~~~~P~K~~~ymA~G~-PVI~~~~~~~~--~~V~~~~~G~~v~--~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 244 YYKYNNPHKLSLYLAAGL-PVIVWSKAAIA--DFIVENGLGFVVD--SLEELPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred hhhccchHHHHHHHHCCC-CEEECCCccHH--HHHHhCCceEEeC--CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 12235888999985 99998764333 5554466777776 57789999999999999999999999988854
No 36
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.24 E-value=0.015 Score=51.82 Aligned_cols=96 Identities=18% Similarity=0.262 Sum_probs=66.2
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCCh------hhHHHHHh
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDI------PNLKNILL 168 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~------~~l~~~L~ 168 (219)
..+..+.|..|..++.|.-......-++|||++|| |||.++.-. ..+++.=....+.++..+. ..+.+.|.
T Consensus 271 ~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 271 KEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGG--IPEVVVDGETGFLVPPDNSDADGFQAELAKAIN 347 (388)
T ss_pred HHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCC--HHHHhhCCCceEEcCCCCCcccchHHHHHHHHH
Confidence 45678889999999999655555667899999999 888887432 2344433444566666665 56666655
Q ss_pred cC--CHHHHHHHHHHHHH-HhhheeecC
Q 027723 169 SI--SEKRYRKMQMMVKK-VQQHFLWHP 193 (219)
Q Consensus 169 ~i--~~~~~~~mr~~~~~-~~~~f~y~~ 193 (219)
.+ +++..++|.++.++ +.+.|.|..
T Consensus 348 ~l~~~~~~~~~~~~~a~~~~~~~~s~~~ 375 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRKRAEEEFSWGS 375 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 43 57777888887775 446677753
No 37
>PRK14098 glycogen synthase; Provisional
Probab=96.20 E-value=0.052 Score=51.41 Aligned_cols=94 Identities=13% Similarity=0.143 Sum_probs=62.2
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCC---CcEEEEEcCCChhhHHHHHhcC--
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNW---ESFAVFVLERDIPNLKNILLSI-- 170 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw---~~fsv~i~~~~~~~l~~~L~~i-- 170 (219)
....+.++.+.++++|.-..+...-..|||++||+||+...+-. + +.+.|+ ..-.+.++..+...|.+.|..+
T Consensus 373 ~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl-~-d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 373 AFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGI-V-ETIEEVSEDKGSGFIFHDYTPEALVAKLGEALA 450 (489)
T ss_pred HHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCC-c-eeeecCCCCCCceeEeCCCCHHHHHHHHHHHHH
Confidence 44568899999999997777777889999999999998654321 1 111122 3446677888877776665431
Q ss_pred ---CHHHHHHHHHHHHHHhhheeecC
Q 027723 171 ---SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 171 ---~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
.++.+.+|+++. +.+.|.|+.
T Consensus 451 ~~~~~~~~~~~~~~~--~~~~fsw~~ 474 (489)
T PRK14098 451 LYHDEERWEELVLEA--MERDFSWKN 474 (489)
T ss_pred HHcCHHHHHHHHHHH--hcCCCChHH
Confidence 456666665533 335666654
No 38
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.14 E-value=0.065 Score=46.23 Aligned_cols=71 Identities=13% Similarity=0.052 Sum_probs=47.3
Q ss_pred cchHHhhccCccEEEEeCC-CCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC
Q 027723 95 KTDYIQHMKSSKYCICAKG-YEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G-~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i 170 (219)
..+..+.|+.+.+++.|.- .......++|||++|+ |||.+|.--. .++++=..-.+.++. ..++.+.|..+
T Consensus 234 ~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~~~--~e~i~~~~~g~l~~~--~~~l~~~l~~l 305 (335)
T cd03802 234 GAEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRGAV--PEVVEDGVTGFLVDS--VEELAAAVARA 305 (335)
T ss_pred HHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCCCc--hhheeCCCcEEEeCC--HHHHHHHHHHH
Confidence 3456788999999999964 2345678999999997 9999886433 344432222333443 66666666554
No 39
>PRK00654 glgA glycogen synthase; Provisional
Probab=96.06 E-value=0.066 Score=50.05 Aligned_cols=92 Identities=12% Similarity=0.175 Sum_probs=60.9
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccC-CCC-----cEEEEEcCCChhhHHHHHhcC
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEIL-NWE-----SFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~i-dw~-----~fsv~i~~~~~~~l~~~L~~i 170 (219)
.....++.+.+++.|.=..+...-+.|||++||+||+-.-+ -+ .+.+ |.. .-.+.++..+..+|.+.|..+
T Consensus 349 ~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~g-G~--~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~ 425 (466)
T PRK00654 349 LAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTG-GL--ADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRA 425 (466)
T ss_pred HHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCC-Cc--cceeecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 34577899999999977777778899999999988874322 11 2322 331 456778888887776666543
Q ss_pred -----CHHHHHHHHHHHHHHhhheeecC
Q 027723 171 -----SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 171 -----~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
.++...+|.++.. .+.|.|+.
T Consensus 426 l~~~~~~~~~~~~~~~~~--~~~fsw~~ 451 (466)
T PRK00654 426 LELYRQPPLWRALQRQAM--AQDFSWDK 451 (466)
T ss_pred HHHhcCHHHHHHHHHHHh--ccCCChHH
Confidence 3455666666543 35566654
No 40
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.03 E-value=0.075 Score=46.31 Aligned_cols=93 Identities=19% Similarity=0.324 Sum_probs=57.1
Q ss_pred cchHHhhccCccEEEEeCCC-CCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCC-hhhHHHHHhcCCH
Q 027723 95 KTDYIQHMKSSKYCICAKGY-EVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERD-IPNLKNILLSISE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~-~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~-~~~l~~~L~~i~~ 172 (219)
..+..+.+..+..++.|.-. .....-++|||++|| |||.++.- +..+++.-+ ...++..+ +.+....|-. .+
T Consensus 258 ~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~--g~~~~~~~~l~~~i~~l~~-~~ 331 (363)
T cd04955 258 DQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGDK--AIYFKVGDDLASLLEELEA-DP 331 (363)
T ss_pred hHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecCC--eeEecCchHHHHHHHHHHh-CH
Confidence 45567888888988888654 445667999999999 77777643 233444332 33344444 3332222222 34
Q ss_pred HHHHHHHHHHHHHh-hheeecC
Q 027723 173 KRYRKMQMMVKKVQ-QHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~~~~-~~f~y~~ 193 (219)
+.+.+|.++.++.. +.|.|+.
T Consensus 332 ~~~~~~~~~~~~~~~~~fs~~~ 353 (363)
T cd04955 332 EEVSAMAKAARERIREKYTWEK 353 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 67777877777554 4576654
No 41
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=95.82 E-value=0.029 Score=49.80 Aligned_cols=96 Identities=18% Similarity=0.168 Sum_probs=67.5
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.+.++...+.|.-......-+.|||++|| |||.++.-.-| .+.+.=.+..+.++..+..++.+.|..+ .+
T Consensus 269 ~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~ 346 (372)
T cd04949 269 TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLNDP 346 (372)
T ss_pred CCCHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHcCH
Confidence 34677889999999999655455678999999999 77776622111 2334334556677777777766666554 57
Q ss_pred HHHHHHHHHHHHHhhheeec
Q 027723 173 KRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~f~y~ 192 (219)
+...+|.++.++..+.|.|.
T Consensus 347 ~~~~~~~~~a~~~~~~~s~~ 366 (372)
T cd04949 347 KLLQKFSEAAYENAERYSEE 366 (372)
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 78899999888877776654
No 42
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=95.79 E-value=0.15 Score=44.12 Aligned_cols=96 Identities=11% Similarity=0.075 Sum_probs=64.9
Q ss_pred cchHHhhccCccEEEEeCCC------CCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHh
Q 027723 95 KTDYIQHMKSSKYCICAKGY------EVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILL 168 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~------~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~ 168 (219)
..+..+.++++.++++|... ......++|||++||-.|. ++.- .+.+++.=..-...+++.+..++.+.|.
T Consensus 246 ~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~-~~~~--~~~~~i~~~~~g~~~~~~~~~~l~~~i~ 322 (355)
T cd03799 246 QEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVIS-TDVS--GIPELVEDGETGLLVPPGDPEALADAIE 322 (355)
T ss_pred hHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEe-cCCC--CcchhhhCCCceEEeCCCCHHHHHHHHH
Confidence 46788999999999999554 3456789999999986654 4432 2334443334566677777776666665
Q ss_pred cC--CHHHHHHHHHHHHHH-hhheeecC
Q 027723 169 SI--SEKRYRKMQMMVKKV-QQHFLWHP 193 (219)
Q Consensus 169 ~i--~~~~~~~mr~~~~~~-~~~f~y~~ 193 (219)
.+ .+++..+|.++.++. ...|.|+.
T Consensus 323 ~~~~~~~~~~~~~~~a~~~~~~~~s~~~ 350 (355)
T cd03799 323 RLLDDPELRREMGEAGRARVEEEFDIRK 350 (355)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 54 466678888887754 45666653
No 43
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=95.78 E-value=0.23 Score=42.54 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=60.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..|.+.++|......+..++|||++|+ |||.++.- .+.+.+.=....+.++..+. ++.+.+..+ .+
T Consensus 269 ~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~ 344 (374)
T cd03817 269 REELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP--GLPDLVADGENGFLFPPGDE-ALAEALLRLLQDP 344 (374)
T ss_pred hHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCC--ChhhheecCceeEEeCCCCH-HHHHHHHHHHhCh
Confidence 46788999999999999776656778999999987 55555532 23344433345556666553 444444333 35
Q ss_pred HHHHHHHHHHHHHhhhee
Q 027723 173 KRYRKMQMMVKKVQQHFL 190 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~f~ 190 (219)
+..++|.++.++..+.+.
T Consensus 345 ~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 345 ELRRRLSKNAEESAEKFS 362 (374)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666788888887776644
No 44
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.74 E-value=0.038 Score=39.62 Aligned_cols=72 Identities=14% Similarity=0.162 Sum_probs=44.5
Q ss_pred CCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHHHh-hheeec
Q 027723 116 VHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEKRYRKMQMMVKKVQ-QHFLWH 192 (219)
Q Consensus 116 ~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~~~~~mr~~~~~~~-~~f~y~ 192 (219)
..+.|++|+|++|+..|.-.. ..+.+.+++.+-.+.+. +..++.+.+..+ .+++.++|.++..+.. .++.|.
T Consensus 10 ~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t~~ 84 (92)
T PF13524_consen 10 GPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVLKRHTWE 84 (92)
T ss_pred CCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCCHH
Confidence 356799999999986655433 22334455666666665 444433333332 6888888888876444 466654
No 45
>PRK14099 glycogen synthase; Provisional
Probab=95.72 E-value=0.13 Score=48.55 Aligned_cols=94 Identities=13% Similarity=0.116 Sum_probs=63.0
Q ss_pred chHHhhc-cCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCC--------cEEEEEcCCChhhHHHH
Q 027723 96 TDYIQHM-KSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE--------SFAVFVLERDIPNLKNI 166 (219)
Q Consensus 96 ~~y~~~~-~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~--------~fsv~i~~~~~~~l~~~ 166 (219)
.+....+ +.+.+.+.|.-..+...-..|||++||+||+- +.--++ +.+.|.+ .-.+.++..+...|.+.
T Consensus 360 ~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs-~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~a 437 (485)
T PRK14099 360 EALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVA-RVGGLA-DTVVDANEMAIATGVATGVQFSPVTADALAAA 437 (485)
T ss_pred HHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEe-CCCCcc-ceeecccccccccCCCceEEeCCCCHHHHHHH
Confidence 3445555 46999999977777788899999999999884 321121 1123442 35677888888777766
Q ss_pred Hhc----C-CHHHHHHHHHHHHHHhhheeecC
Q 027723 167 LLS----I-SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 167 L~~----i-~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
|.. + +++...+|+++.. .+.|.|..
T Consensus 438 i~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~ 467 (485)
T PRK14099 438 LRKTAALFADPVAWRRLQRNGM--TTDVSWRN 467 (485)
T ss_pred HHHHHHHhcCHHHHHHHHHHhh--hhcCChHH
Confidence 653 2 4677778887664 35677764
No 46
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=95.56 E-value=0.085 Score=47.12 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=57.6
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC-CHH-
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI-SEK- 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i-~~~- 173 (219)
..+.+.+..+..++.|........-++|||++| +|||.++..-- ..+++.=....+.++..+..++.+.+..+ ++.
T Consensus 249 ~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g-~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSG-PRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCC-hHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 345666788888998876655678899999999 68888872221 22444334455667888888777666654 222
Q ss_pred --HHHHHHHHHHHHhhh
Q 027723 174 --RYRKMQMMVKKVQQH 188 (219)
Q Consensus 174 --~~~~mr~~~~~~~~~ 188 (219)
....+++++++..+.
T Consensus 327 ~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 327 KYQHDAIPNSIERFYEV 343 (359)
T ss_pred cCCHHHHHHHHHHhhHH
Confidence 234555555544433
No 47
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.52 E-value=0.11 Score=48.07 Aligned_cols=92 Identities=14% Similarity=0.219 Sum_probs=60.0
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCccc-CCCC-----cEEEEEcCCChhhHHHHHhc
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEI-LNWE-----SFAVFVLERDIPNLKNILLS 169 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~-idw~-----~fsv~i~~~~~~~l~~~L~~ 169 (219)
....+.++.+.+.+.|.-..+...-.+|||++||.||....+ - ..+. .|.. .-.+.++..+..+|.+.|..
T Consensus 362 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g-g--~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~ 438 (476)
T cd03791 362 ALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG-G--LADTVIDYNEDTGEGTGFVFEGYNADALLAALRR 438 (476)
T ss_pred HHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC-C--ccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHH
Confidence 345678899999999977777778899999999998764332 1 1232 2332 14667777777766666554
Q ss_pred C-----CHHHHHHHHHHHHHHhhheeec
Q 027723 170 I-----SEKRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 170 i-----~~~~~~~mr~~~~~~~~~f~y~ 192 (219)
+ .++...+|.++..+ ..|.|+
T Consensus 439 ~l~~~~~~~~~~~~~~~~~~--~~fsw~ 464 (476)
T cd03791 439 ALALYRDPEAWRKLQRNAMA--QDFSWD 464 (476)
T ss_pred HHHHHcCHHHHHHHHHHHhc--cCCChH
Confidence 3 35666666665432 345554
No 48
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=95.38 E-value=0.22 Score=45.82 Aligned_cols=86 Identities=15% Similarity=0.195 Sum_probs=56.8
Q ss_pred cchHHhhccCccEEEEeC----CCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC
Q 027723 95 KTDYIQHMKSSKYCICAK----GYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~----G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i 170 (219)
..++.+.|..+..+++|. |.+ ...-++|||++|+ |||.++.-. ..+++.=..-.+.+. +..+|.+.|..+
T Consensus 305 ~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama~G~-PVI~s~~~~--~~eiv~~~~~G~lv~--d~~~la~~i~~l 378 (415)
T cd03816 305 AEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFGCGL-PVCALDFKC--IDELVKHGENGLVFG--DSEELAEQLIDL 378 (415)
T ss_pred HHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHHcCC-CEEEeCCCC--HHHHhcCCCCEEEEC--CHHHHHHHHHHH
Confidence 467888999999988653 222 3567999999999 999987532 234553233334443 566555555443
Q ss_pred --C---HHHHHHHHHHHHHHh
Q 027723 171 --S---EKRYRKMQMMVKKVQ 186 (219)
Q Consensus 171 --~---~~~~~~mr~~~~~~~ 186 (219)
+ +++..+|.++.++..
T Consensus 379 l~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 379 LSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HhcCCCHHHHHHHHHHHHHhh
Confidence 2 678888888777765
No 49
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.35 E-value=0.24 Score=42.87 Aligned_cols=95 Identities=11% Similarity=0.090 Sum_probs=64.6
Q ss_pred cchHHhhccCccEEEEeCC--CCCCchhHHHHHhcCcEeEEeeCCccCCCcccC-CCCcEEEEEcCCChhhHHHHHhcC-
Q 027723 95 KTDYIQHMKSSKYCICAKG--YEVHSPRVVEAIFYECVPVIISDNFVPPFFEIL-NWESFAVFVLERDIPNLKNILLSI- 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G--~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~i-dw~~fsv~i~~~~~~~l~~~L~~i- 170 (219)
..+..+.+..+..+++|.- ......-++|||.+|+ |||.++.-..+ +.+ +.......++..+..++.+.+..+
T Consensus 254 ~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~-Pvi~~~~~~~~--~~i~~~~~~g~~~~~~d~~~~~~~i~~l~ 330 (357)
T cd03795 254 DEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGK-PVISTEIGTGG--SYVNLHGVTGLVVPPGDPAALAEAIRRLL 330 (357)
T ss_pred HHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCC-CEEecCCCCch--hHHhhCCCceEEeCCCCHHHHHHHHHHHH
Confidence 4567889999999999852 2234567999999975 66666532221 222 235667777888887777666654
Q ss_pred -CHHHHHHHHHHHHHHh-hheeec
Q 027723 171 -SEKRYRKMQMMVKKVQ-QHFLWH 192 (219)
Q Consensus 171 -~~~~~~~mr~~~~~~~-~~f~y~ 192 (219)
.+++..+|.++.++.. ++|.|+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 331 EDPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred HCHHHHHHHHHHHHHHHHHhcchH
Confidence 5788889999888765 556553
No 50
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=95.31 E-value=0.15 Score=46.11 Aligned_cols=94 Identities=12% Similarity=0.052 Sum_probs=57.1
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC---C
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI---S 171 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i---~ 171 (219)
..+..+.+..+..++.|.-.......+.|||++|| |||.++.--. .+++.=+. .+.++. +..++.+.|..+ +
T Consensus 260 ~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg~--~e~i~~~~-~~~~~~-~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 260 HERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGGI--PEVLPPDM-ILLAEP-DVESIVRKLEEAISIL 334 (398)
T ss_pred HHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCCc--hhheeCCc-eeecCC-CHHHHHHHHHHHHhCh
Confidence 35788899999999998655445678999999998 5666664332 34443232 333333 555554444332 2
Q ss_pred HHHHHHHHHHHHHHhhheeecC
Q 027723 172 EKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
.++...+++....+.++|.|..
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHHH
Confidence 2332334555566778888765
No 51
>PLN02949 transferase, transferring glycosyl groups
Probab=95.15 E-value=0.34 Score=45.71 Aligned_cols=94 Identities=14% Similarity=0.169 Sum_probs=60.4
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccC-CCC--cEEEEEcCCChhhHHHHHhcC--
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEIL-NWE--SFAVFVLERDIPNLKNILLSI-- 170 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~i-dw~--~fsv~i~~~~~~~l~~~L~~i-- 170 (219)
.+..+.|+++.+++.|.-......-+.|||++||+||....+- |-.+++ ++. .-.+ +. .+..++.+.+..+
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gG--p~~eIV~~~~~g~tG~-l~-~~~~~la~ai~~ll~ 421 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAG--PKMDIVLDEDGQQTGF-LA-TTVEEYADAILEVLR 421 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCC--CcceeeecCCCCcccc-cC-CCHHHHHHHHHHHHh
Confidence 5677889999998888655556778999999998877765431 322332 221 1111 11 2555555555443
Q ss_pred -CHHHHHHHHHHHHHHhhheeecC
Q 027723 171 -SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 171 -~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+++...+|+++.++....|.|+.
T Consensus 422 ~~~~~r~~m~~~ar~~~~~FS~e~ 445 (463)
T PLN02949 422 MRETERLEIAAAARKRANRFSEQR 445 (463)
T ss_pred CCHHHHHHHHHHHHHHHHHcCHHH
Confidence 56778889988887777777653
No 52
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=95.07 E-value=0.38 Score=44.07 Aligned_cols=94 Identities=16% Similarity=0.170 Sum_probs=58.5
Q ss_pred chHHhhccCc--cEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcC-CChhhHHHHHhcC--
Q 027723 96 TDYIQHMKSS--KYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLE-RDIPNLKNILLSI-- 170 (219)
Q Consensus 96 ~~y~~~~~~S--~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~-~~~~~l~~~L~~i-- 170 (219)
.+..+.++.+ ...+.|........-+.|||++|+ |||.++.--. .++++=..-.+.++. .+..++.+.|..+
T Consensus 300 ~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg~--~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~ 376 (407)
T cd04946 300 SEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGGT--PEIVDNGGNGLLLSKDPTPNELVSSLSKFID 376 (407)
T ss_pred HHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCCc--HHHhcCCCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 3455666553 333334333334667999999995 9999884333 355543434555554 3666666666554
Q ss_pred CHHHHHHHHHHHHHHh-hheeec
Q 027723 171 SEKRYRKMQMMVKKVQ-QHFLWH 192 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~-~~f~y~ 192 (219)
+++...+|+++.++.. ++|.++
T Consensus 377 ~~~~~~~m~~~ar~~~~~~f~~~ 399 (407)
T cd04946 377 NEEEYQTMREKAREKWEENFNAS 399 (407)
T ss_pred CHHHHHHHHHHHHHHHHHHcCHH
Confidence 5888899998888765 556654
No 53
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=94.96 E-value=0.068 Score=49.44 Aligned_cols=95 Identities=14% Similarity=0.142 Sum_probs=63.3
Q ss_pred chHHhhccCc----cEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC-
Q 027723 96 TDYIQHMKSS----KYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI- 170 (219)
Q Consensus 96 ~~y~~~~~~S----~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i- 170 (219)
.+..+.|+.+ ...+.|.-......-+.|||++|+ |||.++.-- ..+++.=.+-.+.++..+...|.+.+..+
T Consensus 328 ~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg--~~eiv~~~~~G~lv~~~d~~~la~~i~~ll 404 (439)
T TIGR02472 328 DDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDGG--PRDIIANCRNGLLVDVLDLEAIASALEDAL 404 (439)
T ss_pred HHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCCC--cHHHhcCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 3445556554 444555434445667999999999 999998532 34555445567778888887776666554
Q ss_pred -CHHHHHHHHHHHHH-HhhheeecC
Q 027723 171 -SEKRYRKMQMMVKK-VQQHFLWHP 193 (219)
Q Consensus 171 -~~~~~~~mr~~~~~-~~~~f~y~~ 193 (219)
+++...+|.++.++ +.++|.|+.
T Consensus 405 ~~~~~~~~~~~~a~~~~~~~fsw~~ 429 (439)
T TIGR02472 405 SDSSQWQLWSRNGIEGVRRHYSWDA 429 (439)
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 46667777777664 557788764
No 54
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=94.76 E-value=0.13 Score=46.55 Aligned_cols=91 Identities=15% Similarity=0.220 Sum_probs=60.6
Q ss_pred hHHhhccCccEEEEeC--CCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 97 DYIQHMKSSKYCICAK--GYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~--G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
+....+..+..+++|. |.| ...-++|||++|+ |||.++.. .+.+..=....+.++ .+..++.+.+..+ ++
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG-~~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARG-IQNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLANP 363 (397)
T ss_pred CHHHHHHhCCEEEecccccCC-cccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHcCH
Confidence 5678889999999984 444 3457999999998 99988742 122211123345555 6666666655543 46
Q ss_pred HHHHHHHHHHHHH-hhheeecC
Q 027723 173 KRYRKMQMMVKKV-QQHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~~~-~~~f~y~~ 193 (219)
+...+|.++.++. .+.|.|+.
T Consensus 364 ~~~~~~~~~ar~~v~~~fsw~~ 385 (397)
T TIGR03087 364 AEREELGQAARRRVLQHYHWPR 385 (397)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 7778888887764 46788864
No 55
>PHA01633 putative glycosyl transferase group 1
Probab=94.69 E-value=0.097 Score=47.45 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=59.2
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCC--C----------------cEEEEEc
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNW--E----------------SFAVFVL 156 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw--~----------------~fsv~i~ 156 (219)
..+..+.++.+.+-+.|.-......-+.|||++|| |||.++-- +..++..+ + -....++
T Consensus 214 ~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~~--~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~ 290 (335)
T PHA01633 214 REYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLMP--PLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIH 290 (335)
T ss_pred HHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccCC--CceeecCCccceeeCCCCHHHhcCcccCceeeec
Confidence 35677899999999999766667788999999999 99988643 33333322 1 1223455
Q ss_pred CCChhhHHHHHhcC-CHHHHHHHHHHHHHHhhheeec
Q 027723 157 ERDIPNLKNILLSI-SEKRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 157 ~~~~~~l~~~L~~i-~~~~~~~mr~~~~~~~~~f~y~ 192 (219)
..+..++.+.|... ...+-.++..+.++..+.|.|+
T Consensus 291 ~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f~~~ 327 (335)
T PHA01633 291 KFQIEDMANAIILAFELQDREERSMKLKELAKKYDIR 327 (335)
T ss_pred CCCHHHHHHHHHHHHhccChhhhhHHHHHHHHhcCHH
Confidence 55666655555432 1222223344556667777664
No 56
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=94.61 E-value=0.16 Score=45.43 Aligned_cols=93 Identities=17% Similarity=0.095 Sum_probs=60.8
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCC-h-hhHHHHHhcCCHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERD-I-PNLKNILLSISEK 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~-~-~~l~~~L~~i~~~ 173 (219)
.+..+.++.+..++.|........-+.|||++| +|||.++.-.++ +.+.-....+.++..+ + ..|...|. +++
T Consensus 265 ~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a~~i~~ll~--~~~ 339 (372)
T cd03792 265 LEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAAVRILYLLR--DPE 339 (372)
T ss_pred HHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHHHHHHHHHc--CHH
Confidence 456688899999998876655677899999999 699998854333 4443333334444322 1 12333333 477
Q ss_pred HHHHHHHHHHHH-hhheeecC
Q 027723 174 RYRKMQMMVKKV-QQHFLWHP 193 (219)
Q Consensus 174 ~~~~mr~~~~~~-~~~f~y~~ 193 (219)
...+|.++.++. .+.|.|..
T Consensus 340 ~~~~~~~~a~~~~~~~~s~~~ 360 (372)
T cd03792 340 LRRKMGANAREHVRENFLITR 360 (372)
T ss_pred HHHHHHHHHHHHHHHHcCHHH
Confidence 788898888774 56777754
No 57
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=94.56 E-value=0.17 Score=43.91 Aligned_cols=95 Identities=9% Similarity=0.053 Sum_probs=65.4
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..|.+.+.|......+.-++|||.+||- ||.++. -+..+.+.=.+..+.++..+..++.+.|..+ .+
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~--~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDV--GGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP 331 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecC--CCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH
Confidence 446778899999999998766677889999999985 666553 2334555434556677777777666655543 46
Q ss_pred HHHHHHHHHHHHHh-hheeec
Q 027723 173 KRYRKMQMMVKKVQ-QHFLWH 192 (219)
Q Consensus 173 ~~~~~mr~~~~~~~-~~f~y~ 192 (219)
+...+|.++.++.. +.|.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~s~~ 352 (365)
T cd03825 332 DEREELGEAARELAENEFDSR 352 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 66788888777654 455543
No 58
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=94.24 E-value=0.25 Score=41.64 Aligned_cols=90 Identities=17% Similarity=0.136 Sum_probs=58.0
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhH----HHHHhcCC
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNL----KNILLSIS 171 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l----~~~L~~i~ 171 (219)
.+..+.+..+.++++|.-.......++|||++||. ||.+|.- ...+++.=....+.++.++...+ ..++....
T Consensus 255 ~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 255 SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLL 331 (353)
T ss_pred CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccC
Confidence 45678899999999997655556789999999985 5555533 33455544556667788777765 33333332
Q ss_pred -HHHHHHHHH-HHHHHhhh
Q 027723 172 -EKRYRKMQM-MVKKVQQH 188 (219)
Q Consensus 172 -~~~~~~mr~-~~~~~~~~ 188 (219)
++...+|.. +...+.++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~ 350 (353)
T cd03811 332 DPELRERLAAAARERVARE 350 (353)
T ss_pred ChHHHHHHHHHHHHHHHHH
Confidence 555666666 44444444
No 59
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=93.81 E-value=0.53 Score=43.21 Aligned_cols=93 Identities=14% Similarity=0.146 Sum_probs=58.2
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCC-cEEEEEcCCChhhHHHHHhcC--CH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE-SFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~-~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
.+..+++.++++.+--+=+.-....+.|+|++|.|||.=..+-. -++-+.+|. +-.=+..+++......+|+-+ +.
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP-~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~~~~ 426 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGP-LLDIVTPWDGETTGFLAPTDEEYAEAILKIVKLNY 426 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCC-ceeeeeccCCccceeecCChHHHHHHHHHHHHcCH
Confidence 46778899999988877666667889999999999998654211 112223443 233334444444344444433 45
Q ss_pred HHHHHHHHHHHHHhhhe
Q 027723 173 KRYRKMQMMVKKVQQHF 189 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~f 189 (219)
++...||++-+.--.+|
T Consensus 427 ~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 427 DERNMMRRNARKSLARF 443 (465)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 55777888776655554
No 60
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.78 E-value=0.22 Score=46.58 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=65.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCC------CcEEEEEcCCChhhHHHHHh
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNW------ESFAVFVLERDIPNLKNILL 168 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw------~~fsv~i~~~~~~~l~~~L~ 168 (219)
..+..+.|..+...+.|.-......-++|||++|| |||.+|.-- ..+++.= ....+.++..+..++.+.+.
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~--~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~ 437 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGS--CRELIEGADDEALGPAGEVVPPADPEALARAIL 437 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCC--hHHHhcCCcccccCCceEEECCCCHHHHHHHHH
Confidence 55677889999999988644445668999999999 888876422 2233321 34677888888887776666
Q ss_pred cC--CHHHHHHHHHHHHHHh-hheeec
Q 027723 169 SI--SEKRYRKMQMMVKKVQ-QHFLWH 192 (219)
Q Consensus 169 ~i--~~~~~~~mr~~~~~~~-~~f~y~ 192 (219)
.+ +++...+|.++.++.. +.|.|.
T Consensus 438 ~ll~~~~~~~~~~~~a~~~v~~~~s~~ 464 (475)
T cd03813 438 RLLKDPELRRAMGEAGRKRVERYYTLE 464 (475)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhCCHH
Confidence 54 5778888888777544 445543
No 61
>PHA01630 putative group 1 glycosyl transferase
Probab=93.37 E-value=0.24 Score=44.47 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=32.3
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeC
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISD 136 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d 136 (219)
..+..+.++.+..++.|.-......-+.|||++|| |||.++
T Consensus 200 ~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~ 240 (331)
T PHA01630 200 DDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTE 240 (331)
T ss_pred HHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeC
Confidence 46778889999999999655545677999999998 566665
No 62
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=93.32 E-value=0.83 Score=44.35 Aligned_cols=94 Identities=15% Similarity=0.063 Sum_probs=57.9
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHH---hcCC-
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNIL---LSIS- 171 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L---~~i~- 171 (219)
.+..+.|..+...+.|.-......-++|||++|+ |||.++.--. .+.+.=..-.+.++..+...+.+.+ .++.
T Consensus 464 ~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~--~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ 540 (578)
T PRK15490 464 RDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGS--AECFIEGVSGFILDDAQTVNLDQACRYAEKLVN 540 (578)
T ss_pred hhHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCc--HHHcccCCcEEEECCCChhhHHHHHHHHHHHHH
Confidence 4567788899998888655556788999999999 9998885333 2444445556667777654433322 2221
Q ss_pred -HHHHHHHHHHHHH-Hhhheeec
Q 027723 172 -EKRYRKMQMMVKK-VQQHFLWH 192 (219)
Q Consensus 172 -~~~~~~mr~~~~~-~~~~f~y~ 192 (219)
.++...|.++.++ +.++|.|+
T Consensus 541 ll~~~~~mg~~ARe~V~e~FS~e 563 (578)
T PRK15490 541 LWRSRTGICQQTQSFLQERFTVE 563 (578)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHH
Confidence 1122334444443 45666664
No 63
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=93.00 E-value=0.32 Score=47.25 Aligned_cols=98 Identities=14% Similarity=0.268 Sum_probs=63.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCC-C-cccC-CCCcEEEEEcC-------CChhhHH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPP-F-FEIL-NWESFAVFVLE-------RDIPNLK 164 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lP-F-~~~i-dw~~fsv~i~~-------~~~~~l~ 164 (219)
..+|.+.++.+..++.|.-..+++.-..|||++| +|||.++.--++ | .+++ +-.+..+.|.. +.+.+|.
T Consensus 465 g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La 543 (590)
T cd03793 465 GLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLT 543 (590)
T ss_pred CcchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHH
Confidence 3469999999999999987788888999999999 599999864432 0 1333 33345666652 2334554
Q ss_pred HHHhcC---CHHHHHHHHHHHHHHhhheeecC
Q 027723 165 NILLSI---SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 165 ~~L~~i---~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+.|..+ +..+....|..-.++.+.|.|..
T Consensus 544 ~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~ 575 (590)
T cd03793 544 QYMYEFCQLSRRQRIIQRNRTERLSDLLDWRN 575 (590)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHH
Confidence 444442 33333333333347788899876
No 64
>PLN02939 transferase, transferring glycosyl groups
Probab=92.69 E-value=0.77 Score=47.06 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=61.5
Q ss_pred HhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCC--------cEEEEEcCCChhhHHHHHhc-
Q 027723 99 IQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE--------SFAVFVLERDIPNLKNILLS- 169 (219)
Q Consensus 99 ~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~--------~fsv~i~~~~~~~l~~~L~~- 169 (219)
...++.|.+.++|.=..+...-..|||++|++||+...+- ++ +-+.|++ .-.+.++..+...|.+.|..
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-LN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-Cc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 4689999999999777778888999999999999764332 11 1223332 23566777777666554432
Q ss_pred ---C--CHHHHHHHHHHHHHHhhheeecC
Q 027723 170 ---I--SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 170 ---i--~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+ +++...+|+++. +.+.|.|..
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe~ 955 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWDS 955 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHHH
Confidence 2 477788887643 346677765
No 65
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=91.49 E-value=0.54 Score=48.64 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=66.2
Q ss_pred hHHhhccCc----cEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--
Q 027723 97 DYIQHMKSS----KYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI-- 170 (219)
Q Consensus 97 ~y~~~~~~S----~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i-- 170 (219)
+..+.++.+ ..++.|.=..+...-+.|||++|+ |||.++.- ...+++.-..-.+.++..+...|.+.|..+
T Consensus 560 dvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-PVVASdvG--G~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~ 636 (1050)
T TIGR02468 560 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PMVATKNG--GPVDIHRVLDNGLLVDPHDQQAIADALLKLVA 636 (1050)
T ss_pred HHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC-CEEEeCCC--CcHHHhccCCcEEEECCCCHHHHHHHHHHHhh
Confidence 445556544 355556445556778999999995 99998843 234555555667788888888777666554
Q ss_pred CHHHHHHHHHHHHHHhhheeecC
Q 027723 171 SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+++...+|.++.++..+.|.|..
T Consensus 637 Dpelr~~m~~~gr~~v~~FSWe~ 659 (1050)
T TIGR02468 637 DKQLWAECRQNGLKNIHLFSWPE 659 (1050)
T ss_pred CHHHHHHHHHHHHHHHHHCCHHH
Confidence 57778899998887777788765
No 66
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=90.35 E-value=3.9 Score=35.60 Aligned_cols=140 Identities=14% Similarity=0.115 Sum_probs=87.7
Q ss_pred CCCCCceEEEeeccCCCc-cHHHHHHHhhcCCC--CeEEeecCCCCCCCCcc----c-CcchHHhhccCccEEEEeCCCC
Q 027723 44 PASQRSILAFFAGSMHGY-LRPILLHHWENKDP--DMKIFGQMPKAKGRGKR----K-GKTDYIQHMKSSKYCICAKGYE 115 (219)
Q Consensus 44 ~~~~R~~L~~F~G~~~~~-~R~~L~~~~~~~~~--~~~v~~~~~~~~g~~~~----~-~~~~y~~~~~~S~FCl~p~G~~ 115 (219)
+=++|.-.++|.|+..+. .|..|.+...+... ++.+...|.. +.|.. . ....-.+...+-||=+...|.+
T Consensus 79 pW~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~ 156 (256)
T smart00672 79 KWSDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWP--GKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVA 156 (256)
T ss_pred CccccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCC--CCChHHhcccCcCCCCHHHHhhcceEEecCCcc
Confidence 446678899999998776 89999887665432 2344433311 11211 0 0112345556889999999997
Q ss_pred CCchhHHHHHhcCcEeEEeeCCccCCCcc-cCCCCcEEEEEcC--CC--hhhHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 027723 116 VHSPRVVEAIFYECVPVIISDNFVPPFFE-ILNWESFAVFVLE--RD--IPNLKNILLSISEKRYRKMQMMVKKVQQH 188 (219)
Q Consensus 116 ~~s~Rl~dai~~GCIPVii~d~~~lPF~~-~idw~~fsv~i~~--~~--~~~l~~~L~~i~~~~~~~mr~~~~~~~~~ 188 (219)
+|.||.--|.+|++++.....+..=|.+ +.+|.-+. -|.. ++ +.+..+.+++ .+++.+++-++.++..+.
T Consensus 157 -~S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYv-Pv~~d~sd~~l~~~i~~~~~-~~~~a~~Ia~~~~~~~~~ 231 (256)
T smart00672 157 -WSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYW-PIKSDLSCRELKEAVDWGNE-HDKKAQEIGKRGSEFIQQ 231 (256)
T ss_pred -chhhHHHHHhcCceEEEeCCchhHHHHhcccCccceE-EeeCCCchhhHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 5889999999999999988655433444 33666553 2322 23 5555555554 456666676666665554
No 67
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=89.94 E-value=0.47 Score=35.69 Aligned_cols=69 Identities=16% Similarity=0.141 Sum_probs=41.7
Q ss_pred chHHhhccCccEEEEeCC-CCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc
Q 027723 96 TDYIQHMKSSKYCICAKG-YEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS 169 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G-~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~ 169 (219)
.++.+.++++.++++|.- +...+..++|+|.+||-.| .++. ++.+.+.-....+.+ ..+..++.+.|..
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi-~~~~---~~~~~~~~~~~~~~~-~~~~~~l~~~i~~ 131 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVI-ASDN---GAEGIVEEDGCGVLV-ANDPEELAEAIER 131 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EE-EEHH---HCHCHS---SEEEE--TT-HHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEE-ECCc---chhhheeecCCeEEE-CCCHHHHHHHHHH
Confidence 479999999999999964 2235689999999998544 4544 445544335566666 6677777666654
No 68
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=89.15 E-value=1.1 Score=39.29 Aligned_cols=83 Identities=14% Similarity=0.146 Sum_probs=52.2
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCc-----ccCCCCcEEEEEcCCC--hhhHHHHHhc
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFF-----EILNWESFAVFVLERD--IPNLKNILLS 169 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~-----~~idw~~fsv~i~~~~--~~~l~~~L~~ 169 (219)
++.+.|..+..++.+.| ..-++|||.+|+ |||+.+.-.-+-+ +.+.-....+.++..+ ..+|.+.|+.
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 78899999999998765 246899999996 7776532110000 1333355566676654 5555555544
Q ss_pred C--CHHHHHHHHHHHHH
Q 027723 170 I--SEKRYRKMQMMVKK 184 (219)
Q Consensus 170 i--~~~~~~~mr~~~~~ 184 (219)
+ +++...+|.++.++
T Consensus 318 ll~~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLLDPANLEAMAEAARK 334 (348)
T ss_pred HHcCHHHHHHHHHHHHh
Confidence 3 46667777776644
No 69
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=88.82 E-value=0.68 Score=41.75 Aligned_cols=68 Identities=12% Similarity=0.125 Sum_probs=43.3
Q ss_pred cchHHhhccCccEEEEeCCCC-----CCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc
Q 027723 95 KTDYIQHMKSSKYCICAKGYE-----VHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS 169 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~-----~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~ 169 (219)
..+..+.++.+..|++|--.+ .....++|+|++|+ |||.++ +.++.....-.+.+ ..+..++.+.|+.
T Consensus 264 ~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~-----~~~~~~~~~~~~~~-~~d~~~~~~ai~~ 336 (373)
T cd04950 264 YKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP-----LPEVRRYEDEVVLI-ADDPEEFVAAIEK 336 (373)
T ss_pred HHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC-----cHHHHhhcCcEEEe-CCCHHHHHHHHHH
Confidence 457888999999999995332 22357999999996 777654 23444333333333 4456665555554
No 70
>PLN02316 synthase/transferase
Probab=87.99 E-value=5.8 Score=41.29 Aligned_cols=93 Identities=14% Similarity=0.164 Sum_probs=59.3
Q ss_pred hhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCC------------cEEEEEcCCChhhHHHHH
Q 027723 100 QHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE------------SFAVFVLERDIPNLKNIL 167 (219)
Q Consensus 100 ~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~------------~fsv~i~~~~~~~l~~~L 167 (219)
..++.+.+.++|.=..+...-..|||++||+||+-..+- +| +-+.|++ .-.+.++..+...|...|
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGG-L~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL 992 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGG-LF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYAL 992 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCC-cH-hhccccccccccccccccCCceEEeCCCCHHHHHHHH
Confidence 689999999999877888889999999999999964431 11 1223442 346677887776554443
Q ss_pred hc-CC--HHHHHHHHHHHHHH-hhheeecCC
Q 027723 168 LS-IS--EKRYRKMQMMVKKV-QQHFLWHPR 194 (219)
Q Consensus 168 ~~-i~--~~~~~~mr~~~~~~-~~~f~y~~~ 194 (219)
.. +. .+....|++..++. .+.|.|...
T Consensus 993 ~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~ 1023 (1036)
T PLN02316 993 NRAISAWYDGRDWFNSLCKRVMEQDWSWNRP 1023 (1036)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHhhCCHHHH
Confidence 32 22 22233344444443 466888764
No 71
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=87.84 E-value=8.3 Score=34.81 Aligned_cols=80 Identities=19% Similarity=0.266 Sum_probs=49.6
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCccc------CCCCcEEEEEcCCChhhHHHHHhc
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEI------LNWESFAVFVLERDIPNLKNILLS 169 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~------idw~~fsv~i~~~~~~~l~~~L~~ 169 (219)
.+..+.|..|...+.+.|.. -+.|||++|+ |||+.+. .|-++. ++ ....+.+ .+...|.+.+..
T Consensus 274 ~~~~~l~~aaDv~V~~~g~~----ti~EAma~g~-PvI~~~~--~pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~ 343 (382)
T PLN02605 274 TNMEEWMGACDCIITKAGPG----TIAEALIRGL-PIILNGY--IPGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAE 343 (382)
T ss_pred ccHHHHHHhCCEEEECCCcc----hHHHHHHcCC-CEEEecC--CCccchhhHHHHHh-CCceeec--CCHHHHHHHHHH
Confidence 36789999999999877632 4899999997 7776652 232322 22 3344433 455555555544
Q ss_pred C--C-HHHHHHHHHHHHHH
Q 027723 170 I--S-EKRYRKMQMMVKKV 185 (219)
Q Consensus 170 i--~-~~~~~~mr~~~~~~ 185 (219)
+ + ++..++|+++.++.
T Consensus 344 ll~~~~~~~~~m~~~~~~~ 362 (382)
T PLN02605 344 WFGDKSDELEAMSENALKL 362 (382)
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 3 2 66777777765543
No 72
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=85.78 E-value=11 Score=35.90 Aligned_cols=94 Identities=13% Similarity=0.089 Sum_probs=59.0
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCC-ccCCCcccCCCCcEEEEEcC----CC----hhhHHHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDN-FVPPFFEILNWESFAVFVLE----RD----IPNLKNI 166 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~-~~lPF~~~idw~~fsv~i~~----~~----~~~l~~~ 166 (219)
.+..+.+..+.-++.|.=......-+.|||++|| |||.+|- +-. .++|.=..-.+.++. .+ +..|.+.
T Consensus 384 ~~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~--~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~ 460 (500)
T TIGR02918 384 RNLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGN--PTFIEDNKNGYLIPIDEEEDDEDQIITALAEK 460 (500)
T ss_pred CCHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCC--HHHccCCCCEEEEeCCccccchhHHHHHHHHH
Confidence 3566778888887777644446778999999997 7777662 222 234433343444541 22 4444443
Q ss_pred Hhc-CCHHHHHHHHHHHHHHhhheeec
Q 027723 167 LLS-ISEKRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 167 L~~-i~~~~~~~mr~~~~~~~~~f~y~ 192 (219)
+.. +.++.+.+|.++..+..+.|.|.
T Consensus 461 I~~ll~~~~~~~~~~~a~~~a~~fs~~ 487 (500)
T TIGR02918 461 IVEYFNSNDIDAFHEYSYQIAEGFLTA 487 (500)
T ss_pred HHHHhChHHHHHHHHHHHHHHHhcCHH
Confidence 322 34667889999998888887664
No 73
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=84.52 E-value=4.6 Score=36.78 Aligned_cols=84 Identities=18% Similarity=0.194 Sum_probs=52.3
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCC-----CCcEEEEEcCCChhhHHHHHhcC
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILN-----WESFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~id-----w~~fsv~i~~~~~~~l~~~L~~i 170 (219)
.+..+.|..|.+.+..+| ..-+.|||++|+ |||+.+.. |=++..+ =..+.+.+ .+..++.+.|..+
T Consensus 265 ~~~~~~~~~aDl~I~k~g----g~tl~EA~a~G~-PvI~~~~~--pgqe~~N~~~~~~~G~g~~~--~~~~~l~~~i~~l 335 (391)
T PRK13608 265 KHMNEWMASSQLMITKPG----GITISEGLARCI-PMIFLNPA--PGQELENALYFEEKGFGKIA--DTPEEAIKIVASL 335 (391)
T ss_pred chHHHHHHhhhEEEeCCc----hHHHHHHHHhCC-CEEECCCC--CCcchhHHHHHHhCCcEEEe--CCHHHHHHHHHHH
Confidence 456788999999987544 235899999995 88886532 3222211 12234333 2444454444443
Q ss_pred --CHHHHHHHHHHHHHHhhh
Q 027723 171 --SEKRYRKMQMMVKKVQQH 188 (219)
Q Consensus 171 --~~~~~~~mr~~~~~~~~~ 188 (219)
+++.+.+|+++.++..+.
T Consensus 336 l~~~~~~~~m~~~~~~~~~~ 355 (391)
T PRK13608 336 TNGNEQLTNMISTMEQDKIK 355 (391)
T ss_pred hcCHHHHHHHHHHHHHhcCC
Confidence 578888999888877654
No 74
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=84.41 E-value=7.2 Score=30.79 Aligned_cols=41 Identities=15% Similarity=0.023 Sum_probs=31.6
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeC
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISD 136 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d 136 (219)
...+...+..|..+++|......+..++|||.+|+-. |.++
T Consensus 172 ~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pv-i~s~ 212 (229)
T cd01635 172 EELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPV-IATD 212 (229)
T ss_pred HHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCE-EEcC
Confidence 3455566666999999988777889999999998755 4554
No 75
>PLN00142 sucrose synthase
Probab=84.22 E-value=3.5 Score=41.79 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=60.0
Q ss_pred hhccC-ccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc------CCH
Q 027723 100 QHMKS-SKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS------ISE 172 (219)
Q Consensus 100 ~~~~~-S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~------i~~ 172 (219)
..+.+ +...+.|.=..+...-+.|||++|+ |||.++.--+ .++|.=..-.+.|+..+...+.+.|.. -++
T Consensus 661 r~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~--~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp 737 (815)
T PLN00142 661 RYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGP--AEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDP 737 (815)
T ss_pred HHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCH
Confidence 33443 3455667555556778999999997 7777764332 244444566777888887765554432 257
Q ss_pred HHHHHHHHHHH-HHhhheeecC
Q 027723 173 KRYRKMQMMVK-KVQQHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~-~~~~~f~y~~ 193 (219)
+...+|.++.+ ++.++|.|..
T Consensus 738 ~lr~~mg~~Ar~rv~e~FSWe~ 759 (815)
T PLN00142 738 SYWNKISDAGLQRIYECYTWKI 759 (815)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 78888888754 5668888876
No 76
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=84.18 E-value=3.1 Score=36.08 Aligned_cols=72 Identities=14% Similarity=0.060 Sum_probs=46.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i 170 (219)
..+..+.+.++.++++|.-......-++|||++||-.| .++.-. ..+++.= ........++..++.+.+..+
T Consensus 257 ~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI-~s~~~~--~~~~i~~-~~~~~~~~~~~~~~a~~i~~l 328 (358)
T cd03812 257 RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCI-LSDTIT--KEVDLTD-LVKFLSLDESPEIWAEEILKL 328 (358)
T ss_pred cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEE-EEcCCc--hhhhhcc-CccEEeCCCCHHHHHHHHHHH
Confidence 45678899999999999766667788999999998554 455322 2233322 334444555556665555554
No 77
>PRK10125 putative glycosyl transferase; Provisional
Probab=83.68 E-value=3.9 Score=37.66 Aligned_cols=68 Identities=18% Similarity=0.169 Sum_probs=50.7
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNI 166 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~ 166 (219)
..+..+.|+.+...+.|.-......-+.|||++|+ |||.+|---. .++++= .-.+.++..|...|.+.
T Consensus 297 ~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~gG~--~Eiv~~-~~G~lv~~~d~~~La~~ 364 (405)
T PRK10125 297 KRKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSDAA--REVLQK-SGGKTVSEEEVLQLAQL 364 (405)
T ss_pred HHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCCCh--HHhEeC-CcEEEECCCCHHHHHhc
Confidence 45678888889988888666666788999999995 8888875433 345542 35788899998887764
No 78
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=83.42 E-value=6.1 Score=36.59 Aligned_cols=138 Identities=16% Similarity=0.173 Sum_probs=81.3
Q ss_pred CCCCceEEEeeccCCCc-cHHHHHHHhhcCCC--CeEEeecCCCCCCCCcccCcchHHhhccCccEEEEeCCCCCCchhH
Q 027723 45 ASQRSILAFFAGSMHGY-LRPILLHHWENKDP--DMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAKGYEVHSPRV 121 (219)
Q Consensus 45 ~~~R~~L~~F~G~~~~~-~R~~L~~~~~~~~~--~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCl~p~G~~~~s~Rl 121 (219)
=.+|.-.++|.|+..+. .|..|.+.-.+... ++.+........ .. ......-.+...+-+|=+...|.+ +|.||
T Consensus 154 W~~K~p~afWRG~~~~~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~-~~-~~~~~~~l~~~~~yKYli~idG~~-~S~Rl 230 (395)
T PF05686_consen 154 WEDKKPKAFWRGSPTVAETRQRLVRCSRSHPDLWDARITKQDWDKE-YK-PGFKHVPLEDQCKYKYLIYIDGNA-WSGRL 230 (395)
T ss_pred hhhcccceEECCCcCCCcchhHHHHHhccCCccceeeechhhhhhh-cc-ccccccCHHHHhhhheeecCCCce-eehhH
Confidence 35677889999988654 59888765543222 233332210000 00 011223345566889999999998 58899
Q ss_pred HHHHhcCcEeEEeeCCccCCCcc-cCCCCcEEEEEcC-CChhhHHHHHhcC--CHHHHHHHHHHHHHHh
Q 027723 122 VEAIFYECVPVIISDNFVPPFFE-ILNWESFAVFVLE-RDIPNLKNILLSI--SEKRYRKMQMMVKKVQ 186 (219)
Q Consensus 122 ~dai~~GCIPVii~d~~~lPF~~-~idw~~fsv~i~~-~~~~~l~~~L~~i--~~~~~~~mr~~~~~~~ 186 (219)
.--|++|++.+.....+..=|.+ +.+|.-+.- |.. ++..+|.+.++=. .+++.+++-++..+..
T Consensus 231 kylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVP-V~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~ 298 (395)
T PF05686_consen 231 KYLLACNSVVLKVKSPYYEFFYRALKPWVHYVP-VKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFA 298 (395)
T ss_pred HHHHcCCceEEEeCCcHHHHHHhhhcccccEEE-eccccchhhHHHHhhhcccChHHHHHHHHHHHHHH
Confidence 99999999999887655433333 346766643 433 4555565555433 2555555555555544
No 79
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=83.20 E-value=1.8 Score=40.60 Aligned_cols=90 Identities=10% Similarity=0.029 Sum_probs=61.2
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcE---eEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc--
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECV---PVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS-- 169 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCI---PVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~-- 169 (219)
..+..+.++.+.-++.|.-......-..|||++|+= |||+++.--.+-. ..-.+.|+..+..++.+.|..
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-----~~~g~lv~p~d~~~la~ai~~~l 425 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-----LSGALLVNPYDIDEVADAIHRAL 425 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-----cCCCEEECCCCHHHHHHHHHHHH
Confidence 457788899999999886544445678899999996 6999874322111 233677888888777665543
Q ss_pred -CCHHHHHHHHHHHHHHhhhe
Q 027723 170 -ISEKRYRKMQMMVKKVQQHF 189 (219)
Q Consensus 170 -i~~~~~~~mr~~~~~~~~~f 189 (219)
.++++..+|.++.++....|
T Consensus 426 ~~~~~e~~~~~~~~~~~v~~~ 446 (460)
T cd03788 426 TMPLEERRERHRKLREYVRTH 446 (460)
T ss_pred cCCHHHHHHHHHHHHHHHHhC
Confidence 36677777777666665553
No 80
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=81.60 E-value=3.9 Score=33.69 Aligned_cols=95 Identities=18% Similarity=0.211 Sum_probs=51.4
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCC--HH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSIS--EK 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~--~~ 173 (219)
.+..+.+..+...+.|.-......-+.||+++| +|||.++.- . ..+.+.=....+.+...+..++.+.+..+- .+
T Consensus 268 ~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~~-~-~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 344 (381)
T COG0438 268 EELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDVG-G-IPEVVEDGETGLLVPPGDVEELADALEQLLEDPE 344 (381)
T ss_pred HHHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCCC-C-hHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHH
Confidence 456667777899999953322334499999999 999887743 1 122222221222333335555555554432 23
Q ss_pred HHHHHHH-HHHHHhhheeecC
Q 027723 174 RYRKMQM-MVKKVQQHFLWHP 193 (219)
Q Consensus 174 ~~~~mr~-~~~~~~~~f~y~~ 193 (219)
..+++.+ ....+...|.|..
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~ 365 (381)
T COG0438 345 LREELGEAARERVEEEFSWER 365 (381)
T ss_pred HHHHHHHHHHHHHHHhcCHHH
Confidence 3444444 2333335555543
No 81
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=81.36 E-value=15 Score=36.59 Aligned_cols=93 Identities=12% Similarity=0.020 Sum_probs=55.8
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCCh--h----hHHHHHhc
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDI--P----NLKNILLS 169 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~--~----~l~~~L~~ 169 (219)
.+....|..+...+.|.-......-++|||.+|+ |||.++.-- ..++|.=..-.+.++..+. . .|.++|..
T Consensus 583 ~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG--~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 583 RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGG--AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred chHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCC--hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 3567778888888888545556788999999995 788777432 2344533455666776553 2 34444443
Q ss_pred CCHHHHHHHHHHHHH-HhhheeecC
Q 027723 170 ISEKRYRKMQMMVKK-VQQHFLWHP 193 (219)
Q Consensus 170 i~~~~~~~mr~~~~~-~~~~f~y~~ 193 (219)
+. .-.+|+++.++ +.+.|.|+.
T Consensus 660 l~--~~~~l~~~ar~~a~~~FS~~~ 682 (694)
T PRK15179 660 CA--ADPGIARKAADWASARFSLNQ 682 (694)
T ss_pred hh--ccHHHHHHHHHHHHHhCCHHH
Confidence 32 12345555554 445666653
No 82
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=80.59 E-value=3.7 Score=36.30 Aligned_cols=85 Identities=16% Similarity=0.202 Sum_probs=52.3
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCC-----CcccCCCCcEEEEEcCCC--hhhHHHHHh
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPP-----FFEILNWESFAVFVLERD--IPNLKNILL 168 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lP-----F~~~idw~~fsv~i~~~~--~~~l~~~L~ 168 (219)
.++.+.|..+..+++..| ..-++|||++|+--|++....... ..+.+--....+.++.++ ...|.+.++
T Consensus 244 ~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~ 319 (357)
T PRK00726 244 DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLL 319 (357)
T ss_pred hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHH
Confidence 467899999999998766 245899999997555553321111 112232234567777766 456666555
Q ss_pred cC--CHHHHHHHHHHHHH
Q 027723 169 SI--SEKRYRKMQMMVKK 184 (219)
Q Consensus 169 ~i--~~~~~~~mr~~~~~ 184 (219)
.+ +++...+|+++.++
T Consensus 320 ~ll~~~~~~~~~~~~~~~ 337 (357)
T PRK00726 320 ELLSDPERLEAMAEAARA 337 (357)
T ss_pred HHHcCHHHHHHHHHHHHh
Confidence 43 36666777776443
No 83
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=78.84 E-value=7.9 Score=39.17 Aligned_cols=86 Identities=12% Similarity=0.107 Sum_probs=59.3
Q ss_pred cEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC------CHHHHHHHH
Q 027723 106 KYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI------SEKRYRKMQ 179 (219)
Q Consensus 106 ~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i------~~~~~~~mr 179 (219)
..+++|.=..+...-+.|||++|+-+| .++.--+ .++|.=..-.+.|+..+...+.+.|..+ +++...+|.
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGlPVV-AT~~GG~--~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms 721 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGLPTF-ATRFGGP--LEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS 721 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCCCEE-EcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 466777666677889999999998554 4443222 2444445667778888887766665532 678888888
Q ss_pred HHHH-HHhhheeecCC
Q 027723 180 MMVK-KVQQHFLWHPR 194 (219)
Q Consensus 180 ~~~~-~~~~~f~y~~~ 194 (219)
++.+ ++.++|.|...
T Consensus 722 ~~a~~rV~~~FSW~~~ 737 (784)
T TIGR02470 722 QGGLQRIYEKYTWKIY 737 (784)
T ss_pred HHHHHHHHHhCCHHHH
Confidence 8855 56788998863
No 84
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=77.63 E-value=42 Score=29.78 Aligned_cols=95 Identities=18% Similarity=0.178 Sum_probs=52.8
Q ss_pred CcchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEee-CCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--
Q 027723 94 GKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIIS-DNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI-- 170 (219)
Q Consensus 94 ~~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~-d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i-- 170 (219)
+..++...|..+.+.+.+.|. -+.||+.+|+ |||.. +.-..| +.+. ....+.++ .+..+|.+.|+.+
T Consensus 264 ~~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~~~~~~~--e~~~-~g~~~lv~-~d~~~i~~ai~~ll~ 333 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLRDTTERP--ETVE-AGTNKLVG-TDKENITKAAKRLLT 333 (365)
T ss_pred ChHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECCCCCCCh--HHHh-cCceEEeC-CCHHHHHHHHHHHHh
Confidence 345678889999998876542 3799999996 77764 322222 3333 33444454 4555555555443
Q ss_pred CHHHHHHHHHHHHHHhhheeecCCCCCcCHHHHHHHHH
Q 027723 171 SEKRYRKMQMMVKKVQQHFLWHPRPVKYDIFHMILHSI 208 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~~~f~y~~~~~~~daf~~~l~~l 208 (219)
+++...+|.++ . .+-+.++|...|+..|
T Consensus 334 ~~~~~~~~~~~----~------~~~g~~~a~~ri~~~l 361 (365)
T TIGR00236 334 DPDEYKKMSNA----S------NPYGDGEASERIVEEL 361 (365)
T ss_pred ChHHHHHhhhc----C------CCCcCchHHHHHHHHH
Confidence 34444444331 1 1123456777766654
No 85
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=77.29 E-value=3.5 Score=37.64 Aligned_cols=88 Identities=11% Similarity=0.085 Sum_probs=52.6
Q ss_pred hHHhhccCccEEEEeCCC-CCCchhHHHHHhcCcEeEEeeCCccCCCcccCC---CCcEEEEEcCCChhhHHHHHhcC--
Q 027723 97 DYIQHMKSSKYCICAKGY-EVHSPRVVEAIFYECVPVIISDNFVPPFFEILN---WESFAVFVLERDIPNLKNILLSI-- 170 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~-~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~id---w~~fsv~i~~~~~~~l~~~L~~i-- 170 (219)
+..+.++.+..++++... .....-++|||++|| |||.++... -|.++.+ -..+.+ +..+..+|.+.|..+
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~--~~~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAI--QVEDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeE--EECCHHHHHHHHHHHhc
Confidence 567888999988776432 113445899999996 888765421 1222211 123333 345566665555443
Q ss_pred CHHHHHHHHHHHHHHhhh
Q 027723 171 SEKRYRKMQMMVKKVQQH 188 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~~~ 188 (219)
+++...+|.++.++....
T Consensus 388 ~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 388 DPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 477778888877766544
No 86
>PLN02275 transferase, transferring glycosyl groups
Probab=76.56 E-value=24 Score=31.69 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=59.1
Q ss_pred ceEEEeeccCCCccHHHHHHHhhcCC-CCeEEeecCCCCCCCCcccCcchHHhhccCccEEEEeCCC---CCCchhHHHH
Q 027723 49 SILAFFAGSMHGYLRPILLHHWENKD-PDMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAKGY---EVHSPRVVEA 124 (219)
Q Consensus 49 ~~L~~F~G~~~~~~R~~L~~~~~~~~-~~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCl~p~G~---~~~s~Rl~da 124 (219)
.+-+.+.|. |..|..|.+..+... +++.+.... ....++.+.|+.+..++.|... .....-++||
T Consensus 261 ~i~l~ivG~--G~~~~~l~~~~~~~~l~~v~~~~~~---------~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEA 329 (371)
T PLN02275 261 RLLFIITGK--GPQKAMYEEKISRLNLRHVAFRTMW---------LEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDM 329 (371)
T ss_pred CeEEEEEeC--CCCHHHHHHHHHHcCCCceEEEcCC---------CCHHHHHHHHHhCCEEEEeccccccccccHHHHHH
Confidence 467778884 566777766554321 234443210 1246788999999999876321 1134578999
Q ss_pred HhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHH
Q 027723 125 IFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNIL 167 (219)
Q Consensus 125 i~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L 167 (219)
|++|+ |||.++.-- ..+++.=....+.++ +..+|.+.|
T Consensus 330 mA~G~-PVVa~~~gg--~~eiv~~g~~G~lv~--~~~~la~~i 367 (371)
T PLN02275 330 FGCGL-PVCAVSYSC--IGELVKDGKNGLLFS--SSSELADQL 367 (371)
T ss_pred HHCCC-CEEEecCCC--hHHHccCCCCeEEEC--CHHHHHHHH
Confidence 99996 888876322 234443333444454 344444433
No 87
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=76.02 E-value=9.5 Score=35.92 Aligned_cols=87 Identities=11% Similarity=0.102 Sum_probs=57.4
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEe----EEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc-
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVP----VIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS- 169 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIP----Vii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~- 169 (219)
..+....++.+.-|++|.=......-..|||++|+ | ||+++.--.+ +.+. -++.|+..+...+.+.|..
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~--~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAA--QELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCCh--HHhC---CcEEECCCCHHHHHHHHHHH
Confidence 46778889999999998644334567899999996 8 8888743222 1222 3677888888877666643
Q ss_pred --CCHHHHHHHHHHHHHHhh
Q 027723 170 --ISEKRYRKMQMMVKKVQQ 187 (219)
Q Consensus 170 --i~~~~~~~mr~~~~~~~~ 187 (219)
.++++..++.+++++...
T Consensus 420 L~~~~~er~~r~~~~~~~v~ 439 (456)
T TIGR02400 420 LTMPLEEREERHRAMMDKLR 439 (456)
T ss_pred HcCCHHHHHHHHHHHHHHHh
Confidence 355555555554544433
No 88
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=73.78 E-value=14 Score=33.05 Aligned_cols=83 Identities=16% Similarity=0.151 Sum_probs=47.0
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCcc-CCCc--ccCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFV-PPFF--EILNWESFAVFVLERDIPNLKNILLSI--S 171 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~-lPF~--~~idw~~fsv~i~~~~~~~l~~~L~~i--~ 171 (219)
+..+.|..|...+...| ..-+.|||.+|+ |||+.+... ..-+ ..+.-..+.+.+ .+..+|.+.|..+ +
T Consensus 266 ~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~~~~g~~~~n~~~~~~~G~~~~~--~~~~~l~~~i~~ll~~ 338 (380)
T PRK13609 266 NIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYKPVPGQEKENAMYFERKGAAVVI--RDDEEVFAKTEALLQD 338 (380)
T ss_pred hHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECCCCCCcchHHHHHHHhCCcEEEE--CCHHHHHHHHHHHHCC
Confidence 46688888986554333 345899999997 577754211 0000 011112334432 4555555555443 4
Q ss_pred HHHHHHHHHHHHHHh
Q 027723 172 EKRYRKMQMMVKKVQ 186 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~ 186 (219)
++.+.+|.++.+++.
T Consensus 339 ~~~~~~m~~~~~~~~ 353 (380)
T PRK13609 339 DMKLLQMKEAMKSLY 353 (380)
T ss_pred HHHHHHHHHHHHHhC
Confidence 777888888776644
No 89
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=71.78 E-value=14 Score=32.23 Aligned_cols=84 Identities=17% Similarity=0.133 Sum_probs=52.7
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCcc-------CCCcccCCCCcEEEEEcCC--ChhhHHHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFV-------PPFFEILNWESFAVFVLER--DIPNLKNI 166 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~-------lPF~~~idw~~fsv~i~~~--~~~~l~~~ 166 (219)
.++.+.|..+.+.+++.|. .-+.|||.+|+- ||+.+.-. .+.+ .+......+.++.. +..+|.+.
T Consensus 244 ~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~P-vv~~~~~~~~~~~~~~~~~-~l~~~g~g~~v~~~~~~~~~l~~~ 317 (350)
T cd03785 244 DDMAAAYAAADLVISRAGA----STVAELAALGLP-AILIPLPYAADDHQTANAR-ALVKAGAAVLIPQEELTPERLAAA 317 (350)
T ss_pred hhHHHHHHhcCEEEECCCH----hHHHHHHHhCCC-EEEeecCCCCCCcHHHhHH-HHHhCCCEEEEecCCCCHHHHHHH
Confidence 5778899999999887662 358999999974 55543211 1112 22224556666665 66666666
Q ss_pred HhcC--CHHHHHHHHHHHHHH
Q 027723 167 LLSI--SEKRYRKMQMMVKKV 185 (219)
Q Consensus 167 L~~i--~~~~~~~mr~~~~~~ 185 (219)
|+.+ +++...+|+++.++.
T Consensus 318 i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 318 LLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred HHHHhcCHHHHHHHHHHHHhc
Confidence 6544 467777787766543
No 90
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=64.09 E-value=73 Score=30.51 Aligned_cols=145 Identities=16% Similarity=0.144 Sum_probs=81.5
Q ss_pred CCCceEEEeeccCCC----ccH-HHHHHHhhcCCCCeEEeecCCCC------------CCC-C--cccCcchHHhhccCc
Q 027723 46 SQRSILAFFAGSMHG----YLR-PILLHHWENKDPDMKIFGQMPKA------------KGR-G--KRKGKTDYIQHMKSS 105 (219)
Q Consensus 46 ~~R~~L~~F~G~~~~----~~R-~~L~~~~~~~~~~~~v~~~~~~~------------~g~-~--~~~~~~~y~~~~~~S 105 (219)
..-..++.|.|++.. +.+ ..+-...+. ...+.+++..... .+. + .......+...++.|
T Consensus 291 ~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~-~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~aga 369 (487)
T COG0297 291 DLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQ-GWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGA 369 (487)
T ss_pred CCCCcEEEEeeccccccchhHHHHHHHHHHHh-CceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcC
Confidence 344578888888742 222 334444433 2445555543100 000 0 012455677889999
Q ss_pred cEEEEeCCCCCCchhHHHHHhcCcEeEEeeCC----ccCCCcccCCC----CcEEEEEcCCChhhHHHHHhc------CC
Q 027723 106 KYCICAKGYEVHSPRVVEAIFYECVPVIISDN----FVPPFFEILNW----ESFAVFVLERDIPNLKNILLS------IS 171 (219)
Q Consensus 106 ~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~----~~lPF~~~idw----~~fsv~i~~~~~~~l~~~L~~------i~ 171 (219)
.+=++|-=..|..---+.||++|||||+-.-+ -+.++.+ | .--.+.+.+.+...+...|+. .+
T Consensus 370 D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~---~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~ 446 (487)
T COG0297 370 DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNE---WLIQGVGTGFLFLQTNPDHLANALRRALVLYRAP 446 (487)
T ss_pred CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccc---hhccCceeEEEEecCCHHHHHHHHHHHHHHhhCC
Confidence 99999976666777778999999999997653 3444443 4 233455555566555444431 12
Q ss_pred HHHHHHHHHHHHHHhhheeecCCCC
Q 027723 172 EKRYRKMQMMVKKVQQHFLWHPRPV 196 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f~y~~~~~ 196 (219)
+.....+|.+-.. ..|.|+....
T Consensus 447 ~~~w~~~~~~~m~--~d~sw~~sa~ 469 (487)
T COG0297 447 PLLWRKVQPNAMG--ADFSWDLSAK 469 (487)
T ss_pred HHHHHHHHHhhcc--cccCchhHHH
Confidence 3324444443333 5677776543
No 91
>PLN02846 digalactosyldiacylglycerol synthase
Probab=63.28 E-value=65 Score=30.58 Aligned_cols=38 Identities=13% Similarity=0.079 Sum_probs=26.9
Q ss_pred hhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc
Q 027723 100 QHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF 138 (219)
Q Consensus 100 ~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~ 138 (219)
+.+...+..+.|.-......-+.|||++|+ |||..|.-
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-PVVa~~~~ 333 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-IVVCANHP 333 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCC-cEEEecCC
Confidence 566666766666544445678899999996 88887643
No 92
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=59.27 E-value=29 Score=35.13 Aligned_cols=88 Identities=8% Similarity=-0.006 Sum_probs=56.1
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEe----EEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc--
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVP----VIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS-- 169 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIP----Vii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~-- 169 (219)
.++...++.+.-|++|.=......-.+|+|++|+ | +|+++----+ +.+ ..-++.|+..+..++-+.|..
T Consensus 367 ~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~-p~~gvlVlSe~~G~~--~~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 367 NYLCALYAITDVMLVTSLRDGMNLVSYEFVACQK-AKKGVLVLSEFAGAG--QSL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHHHHHhCCEEEeCccccccCcchhhHheeec-CCCCCEEeeCCcCch--hhh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 5677899999999999633333456899999998 6 8887632211 112 345888998888876654432
Q ss_pred -CCHHHHHHHHHHHHHHhhh
Q 027723 170 -ISEKRYRKMQMMVKKVQQH 188 (219)
Q Consensus 170 -i~~~~~~~mr~~~~~~~~~ 188 (219)
+++++..++.+++.+....
T Consensus 442 ~m~~~er~~r~~~~~~~v~~ 461 (797)
T PLN03063 442 NMSDEERETRHRHNFQYVKT 461 (797)
T ss_pred hCCHHHHHHHHHHHHHhhhh
Confidence 3555555544444444443
No 93
>cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase. This group contains various PA domain-containing proteins similar to S. pyogenes C5a, including, i) Vpr, a minor extracellular serine protease from Bacillus subtilis, ii) a large molecular mass collagenolytic protease from Geobacillus collagenovorans MO-1, and iii) PrtS, a cell envelope protease from Streptococcus thermophilus CNRZ 385. Proteins in this group belong to the peptidase S8 family. C5a peptidase is a cell surface serine protease which specifically inactivates C5a [a chemotactic peptide, which attracts polymorphonuclear leukocytes (PMNs)], by cleaving it to release a 7-residue carboxy-terminal fragment which contains the PMN binding site. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promotin
Probab=58.54 E-value=27 Score=27.24 Aligned_cols=43 Identities=21% Similarity=0.226 Sum_probs=32.2
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF 138 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~ 138 (219)
.+|...-.+.|..||.+|.-........|...|..-|||.++.
T Consensus 39 ~d~~~~dv~GkIvL~~rg~c~~~~K~~~a~~aGA~gvIi~n~~ 81 (143)
T cd02133 39 EDFEGKDVKGKIALIQRGEITFVEKIANAKAAGAVGVIIYNNV 81 (143)
T ss_pred hccCCCCccceEEEEECCCCCHHHHHHHHHHCCCeEEEEeecC
Confidence 4455544578999999887544556778999999999997654
No 94
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=57.03 E-value=1.8e+02 Score=28.52 Aligned_cols=86 Identities=10% Similarity=0.079 Sum_probs=57.0
Q ss_pred CceEEEeeccCCCc------cHHHHHHHhhc--CCCCeEEeecCCCCCCCCcccCcchHHhhccCccEEEE-eC-CCCCC
Q 027723 48 RSILAFFAGSMHGY------LRPILLHHWEN--KDPDMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCIC-AK-GYEVH 117 (219)
Q Consensus 48 R~~L~~F~G~~~~~------~R~~L~~~~~~--~~~~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCl~-p~-G~~~~ 117 (219)
++.-+.|+|+.++. +-+.+.++-+. ...++.+... .+..--..++..|.+-|. |. |..++
T Consensus 423 ~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~----------Yd~~lA~~i~aG~Dv~L~~Psr~~Eac 492 (601)
T TIGR02094 423 RPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLEN----------YDINLARYLVSGVDVWLNNPRRPLEAS 492 (601)
T ss_pred CCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcC----------CCHHHHHHHhhhheeEEeCCCCCcCCc
Confidence 66778899988643 22333333222 2234444322 233445678889999999 84 58888
Q ss_pred chhHHHHHhcCcEeEEeeCCccCCCc
Q 027723 118 SPRVVEAIFYECVPVIISDNFVPPFF 143 (219)
Q Consensus 118 s~Rl~dai~~GCIPVii~d~~~lPF~ 143 (219)
...-+-|+..|++=.=+-|+|.-.+.
T Consensus 493 GtsqMka~~nGgL~~sv~DG~~~E~~ 518 (601)
T TIGR02094 493 GTSGMKAAMNGVLNLSILDGWWGEGY 518 (601)
T ss_pred hHHHHHHHHcCCceeecccCcccccC
Confidence 88889999999999989888765543
No 95
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=56.96 E-value=30 Score=30.09 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=28.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEe
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVII 134 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii 134 (219)
..+..+.|..+...++..|. -++|++.+| +|+|+
T Consensus 232 ~~~m~~lm~~aDl~Is~~G~-----T~~E~~a~g-~P~i~ 265 (279)
T TIGR03590 232 VENMAELMNEADLAIGAAGS-----TSWERCCLG-LPSLA 265 (279)
T ss_pred HHHHHHHHHHCCEEEECCch-----HHHHHHHcC-CCEEE
Confidence 45678999999999997662 389999999 77776
No 96
>PLN02501 digalactosyldiacylglycerol synthase
Probab=51.04 E-value=57 Score=33.05 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=26.8
Q ss_pred HhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCC
Q 027723 99 IQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDN 137 (219)
Q Consensus 99 ~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~ 137 (219)
.+.++.++..+.|.-......-+.|||++|| |||.+|.
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~Gl-PVVATd~ 650 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAMGK-FVVCADH 650 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHcCC-CEEEecC
Confidence 3567777766666444445677899999997 7887764
No 97
>KOG3185 consensus Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis]
Probab=45.08 E-value=20 Score=30.27 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=27.4
Q ss_pred CccEEEEeCCCCCCchhHHHHHhcCcEeEEee
Q 027723 104 SSKYCICAKGYEVHSPRVVEAIFYECVPVIIS 135 (219)
Q Consensus 104 ~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~ 135 (219)
.-+|||+..|.+..-...||+=..+.|||+-.
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~t 51 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVHT 51 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEEe
Confidence 46899999998877778899999999999853
No 98
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=43.44 E-value=83 Score=27.07 Aligned_cols=114 Identities=20% Similarity=0.304 Sum_probs=63.6
Q ss_pred CCCceEEEeeccCCCccHHHHHHHhhcCC-CCeEEeecCCCCCCCCc--c---cCcchHHhhccCccEEEEeCCCCCCch
Q 027723 46 SQRSILAFFAGSMHGYLRPILLHHWENKD-PDMKIFGQMPKAKGRGK--R---KGKTDYIQHMKSSKYCICAKGYEVHSP 119 (219)
Q Consensus 46 ~~R~~L~~F~G~~~~~~R~~L~~~~~~~~-~~~~v~~~~~~~~g~~~--~---~~~~~y~~~~~~S~FCl~p~G~~~~s~ 119 (219)
..+.+|++|.|.-.+ .+.+.++..+ ..+.+++. ........ + ....++.+.|..++.+++-.|.+
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~~~~~~v~g~-~~~~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~---- 261 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALPDYQFIVFGP-NAADPRPGNIHVRPFSTPDFAELMAAADLVISKGGYT---- 261 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCCCCeEEEEcC-CcccccCCCEEEeecChHHHHHHHHhCCEEEECCCHH----
Confidence 455678888875433 4445554433 34555532 11110011 1 12367899999999999999987
Q ss_pred hHHHHHhcCcEeEEeeCCccCCCcc------cCCCCcEEEEEcCCCh--hhHHHHHhcCC
Q 027723 120 RVVEAIFYECVPVIISDNFVPPFFE------ILNWESFAVFVLERDI--PNLKNILLSIS 171 (219)
Q Consensus 120 Rl~dai~~GCIPVii~d~~~lPF~~------~idw~~fsv~i~~~~~--~~l~~~L~~i~ 171 (219)
-+.|++.+|. |+++-+... +.| .+.=.-+.+.++.+++ .+|.+.|+.+|
T Consensus 262 t~~Ea~~~g~-P~l~ip~~~--~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~~ 318 (318)
T PF13528_consen 262 TISEALALGK-PALVIPRPG--QDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERLP 318 (318)
T ss_pred HHHHHHHcCC-CEEEEeCCC--CchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcCC
Confidence 3889999885 666533211 111 1222334455554444 46666666654
No 99
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=40.17 E-value=82 Score=28.79 Aligned_cols=83 Identities=18% Similarity=0.279 Sum_probs=57.5
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCc---cc------CCCCcEEEEEcCCCh--hhHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFF---EI------LNWESFAVFVLERDI--PNLK 164 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~---~~------idw~~fsv~i~~~~~--~~l~ 164 (219)
++..+.|+.|.-.+|=.|.+ -+.|+...| +|+|+ +.+|+. +. +-=...+..+.+.++ .+|.
T Consensus 244 ~dm~~~~~~ADLvIsRaGa~----Ti~E~~a~g-~P~Il---iP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAGAL----TIAELLALG-VPAIL---VPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCccc----HHHHHHHhC-CCEEE---eCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 46778899999999988875 377888765 79888 445544 11 111356788888884 3566
Q ss_pred HHHhcC--CHHHHHHHHHHHHHHh
Q 027723 165 NILLSI--SEKRYRKMQMMVKKVQ 186 (219)
Q Consensus 165 ~~L~~i--~~~~~~~mr~~~~~~~ 186 (219)
+.|..+ +++++.+|..+.+.+.
T Consensus 316 ~~i~~l~~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 316 ELILRLLSNPEKLKAMAENAKKLG 339 (357)
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcC
Confidence 666554 3699999998776653
No 100
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=39.54 E-value=34 Score=31.06 Aligned_cols=42 Identities=24% Similarity=0.426 Sum_probs=32.2
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCcc
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFV 139 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~ 139 (219)
.+|...+.+.|-|+|- |+.... .+.|+|.-|.|||+++....
T Consensus 124 ~~yp~af~n~kvvvv~-GwDy~~-~~~e~~k~~~~p~~~~n~~~ 165 (337)
T COG2247 124 EDYPNAFKNVKVVVVY-GWDYAD-ALMELMKEGIVPVILKNTSI 165 (337)
T ss_pred hhchhhhcCeEEEEEe-ccccHH-HHHHHHhcCcceeEeccccc
Confidence 4577788888888876 443322 89999999999999998643
No 101
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=36.21 E-value=59 Score=32.39 Aligned_cols=91 Identities=12% Similarity=0.130 Sum_probs=52.7
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCc---EeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc-C
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYEC---VPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS-I 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GC---IPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~-i 170 (219)
..++...++.+.-|++|.=...-..-..|||++|+ =++|++...--. .++.. ++.|+..+..++.+.+.. +
T Consensus 352 ~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~-~~l~~----~llv~P~d~~~la~ai~~~l 426 (726)
T PRK14501 352 FEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAA-AELAE----ALLVNPNDIEGIAAAIKRAL 426 (726)
T ss_pred HHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchh-HHhCc----CeEECCCCHHHHHHHHHHHH
Confidence 46788899999999998533323456889999987 124554421100 11111 677888888877665543 2
Q ss_pred --C-HHHHHHHHHHHHHHhhheee
Q 027723 171 --S-EKRYRKMQMMVKKVQQHFLW 191 (219)
Q Consensus 171 --~-~~~~~~mr~~~~~~~~~f~y 191 (219)
+ +++..++++ +++....+.|
T Consensus 427 ~~~~~e~~~r~~~-~~~~v~~~~~ 449 (726)
T PRK14501 427 EMPEEEQRERMQA-MQERLRRYDV 449 (726)
T ss_pred cCCHHHHHHHHHH-HHHHHHhCCH
Confidence 3 344444443 4433344444
No 102
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=34.97 E-value=23 Score=32.00 Aligned_cols=71 Identities=11% Similarity=0.129 Sum_probs=62.6
Q ss_pred CCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHH
Q 027723 112 KGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRKMQMMV 182 (219)
Q Consensus 112 ~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~mr~~~ 182 (219)
.|-+...+.+.+.+--=-|+|=+|.--.--|.++++++++-|..+.+....|.+.=++++++++.++....
T Consensus 145 ~GLs~~Gk~lV~~~N~LgIiiDlSH~s~kt~~Dvl~~s~~PviaSHSN~~al~~h~RNl~D~qlkaI~~~g 215 (313)
T COG2355 145 GGLTPFGKELVREMNELGIIIDLSHLSDKTFWDVLDLSKAPVVASHSNARALVDHPRNLSDEQLKAIAETG 215 (313)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEecccCCccHHHHHhccCCceEEecCCchhccCCCCCCCHHHHHHHHhcC
Confidence 46678889999999988899999888888899999999999999999998888888999999998888743
No 103
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=34.88 E-value=56 Score=18.88 Aligned_cols=26 Identities=23% Similarity=0.360 Sum_probs=19.0
Q ss_pred CChhhHHHHHhc--CCHHHHHHHHHHHH
Q 027723 158 RDIPNLKNILLS--ISEKRYRKMQMMVK 183 (219)
Q Consensus 158 ~~~~~l~~~L~~--i~~~~~~~mr~~~~ 183 (219)
+.+..|.+.+.+ ||++++.++++.+.
T Consensus 3 ~~L~~L~~l~~~G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 3 DRLEKLKELYDKGEISEEEYEQKKARLL 30 (31)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 445566666654 89999999988764
No 104
>PF07038 DUF1324: Protein of unknown function (DUF1324); InterPro: IPR009757 This family consists of several Circovirus proteins of around 60 residues in length. The function of this family is unknown.
Probab=33.67 E-value=34 Score=22.29 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=28.2
Q ss_pred cCccEEEEeCCC-CCCchhHHHHHhcCcEeEEeeCCccCCCcc
Q 027723 103 KSSKYCICAKGY-EVHSPRVVEAIFYECVPVIISDNFVPPFFE 144 (219)
Q Consensus 103 ~~S~FCl~p~G~-~~~s~Rl~dai~~GCIPVii~d~~~lPF~~ 144 (219)
-+|.||+.|--. +..++|-|-.-..||.---+ -.||.++
T Consensus 7 fqsrfcifpltfkssasprkfltnvtgccsatv---trlplsn 46 (59)
T PF07038_consen 7 FQSRFCIFPLTFKSSASPRKFLTNVTGCCSATV---TRLPLSN 46 (59)
T ss_pred EeeeeEEEEeeeccCCChHHHhhcccceeeeeE---Eeccchh
Confidence 479999999654 44677888888889987665 3456554
No 105
>PF15582 Imm40: Immunity protein 40
Probab=33.06 E-value=54 Score=29.12 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=36.0
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHH-hcCCHHHH
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNIL-LSISEKRY 175 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L-~~i~~~~~ 175 (219)
..-+++++||||+|---....+.+ .||+|+ +.-.|.|....+ .-+-.++ ++|-+++.
T Consensus 261 ~~Y~LF~DSTF~F~NiNG~~~~~~-------------------Im~~D~-~~Ysf~vs~~~s--~~v~~Iyn~GIYDK~~ 318 (327)
T PF15582_consen 261 KMYDLFCDSTFCFCNINGTHTRFS-------------------IMHSDI-DNYSFDVSDNSS--KIVRWIYNRGIYDKED 318 (327)
T ss_pred HHHHHhhhceEEEEEecCceeeee-------------------eeeccc-cceeeEEEecCh--HHHHHHHhcccccchh
Confidence 456899999999998666555443 377775 333344443332 2233444 34655555
Q ss_pred HHHHH
Q 027723 176 RKMQM 180 (219)
Q Consensus 176 ~~mr~ 180 (219)
.+|++
T Consensus 319 ~~~~~ 323 (327)
T PF15582_consen 319 RIRRF 323 (327)
T ss_pred hhhhh
Confidence 55554
No 106
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=32.26 E-value=1.2e+02 Score=27.20 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=28.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEee
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIIS 135 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~ 135 (219)
.--|...|..+...+| .+|+. .-++||+.+| -||.+-
T Consensus 219 ~nPy~~~La~ad~i~V-T~DSv--SMvsEA~~tG-~pV~v~ 255 (311)
T PF06258_consen 219 ENPYLGFLAAADAIVV-TEDSV--SMVSEAAATG-KPVYVL 255 (311)
T ss_pred CCcHHHHHHhCCEEEE-cCccH--HHHHHHHHcC-CCEEEe
Confidence 3458888888886555 57764 4799999999 788873
No 107
>cd00538 PA PA: Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following: i) various signal peptide peptidases including, hSPPL2a and 2b which catalyze the intramembrane proteolysis of tumor necrosis factor alpha, ii) various proteins containing a C3H2C3 RING finger including, Arabidopsis ReMembR-H2 protein and various E3 ubiquitin ligases such as human GRAIL (gene related to anergy in lymphocytes), iii) EDEM3 (ER-degradation-enhancing mannosidase-like 3 protein), iv) various plant vacuolar sorting receptors such as Pisum sativum BP-80, v) g
Probab=32.02 E-value=1.4e+02 Score=21.83 Aligned_cols=70 Identities=20% Similarity=0.023 Sum_probs=41.8
Q ss_pred hhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCcc--CCCccc-----CCCCcEEEEEcCCChhhHHHHHhc
Q 027723 100 QHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFV--PPFFEI-----LNWESFAVFVLERDIPNLKNILLS 169 (219)
Q Consensus 100 ~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~--lPF~~~-----idw~~fsv~i~~~~~~~l~~~L~~ 169 (219)
..-.+-|..||-+|..........|..+|..=|||.++-. .+.... -+..--++.|..++-..|.+.+.+
T Consensus 42 ~~~~~GkIvl~~~g~~~~~~k~~~a~~~GA~gvii~~~~~~~~~~~~~~~~~~~~~~iP~~~is~~~g~~l~~~~~~ 118 (126)
T cd00538 42 GADVKGKIVLVRRGGCSFSEKVKNAQKAGAKAVIIYNNGDDPGPQMGSVGLESTDPSIPTVGISYADGEALLSLLEA 118 (126)
T ss_pred CCCccceEEEEECCCcCHHHHHHHHHHCCCEEEEEEECCCCcccccccccCCCCCCcEeEEEeCHHHHHHHHHHHhc
Confidence 3334688999988874434567889999999999965432 222111 112223455555555556655543
No 108
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=28.70 E-value=2.7e+02 Score=27.66 Aligned_cols=98 Identities=13% Similarity=0.244 Sum_probs=61.7
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCC-----ccC-CCcccCCCCcEEEEEcCCCh----hhHH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDN-----FVP-PFFEILNWESFAVFVLERDI----PNLK 164 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~-----~~l-PF~~~idw~~fsv~i~~~~~----~~l~ 164 (219)
..+|.+.++...-|+.|.=..||..-=.||+.+| ||-|.+|- |.. -..+..++.-+.|.=..... .+|.
T Consensus 460 ~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g-VPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la 538 (633)
T PF05693_consen 460 NLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG-VPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLA 538 (633)
T ss_dssp -S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT---EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHH
T ss_pred CCCHHHHhccCceeeeccccccccCChHHHhhcC-CceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHH
Confidence 5689999999999999998899998899999998 68888882 211 11122334333322222222 2444
Q ss_pred HHHh---cCCHHHHHHHHHHHHHHhhheeecC
Q 027723 165 NILL---SISEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 165 ~~L~---~i~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+.|. ..+.++...+|++-.++...+.|..
T Consensus 539 ~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~ 570 (633)
T PF05693_consen 539 DFLYKFCQLSRRQRIIQRNRAERLSDLADWKN 570 (633)
T ss_dssp HHHHHHHT--HHHHHHHHHHHHHHGGGGBHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 4443 4589999999999999999999986
No 109
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=28.59 E-value=86 Score=20.80 Aligned_cols=49 Identities=14% Similarity=0.146 Sum_probs=27.8
Q ss_pred hHHHHHhcCcEeEEeeCCcc---CCCcccCCCCcEEEEEcCCChhhHHHHHhcC
Q 027723 120 RVVEAIFYECVPVIISDNFV---PPFFEILNWESFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 120 Rl~dai~~GCIPVii~d~~~---lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i 170 (219)
.+-..|..-=||.++.+... .++.....| ..|.|+++|..+-.++|+.+
T Consensus 14 ~i~~~L~~~gI~~~v~~~~~~~~~g~~g~~~~--~~v~V~~~d~~~A~~il~~~ 65 (67)
T PF09413_consen 14 LIKGLLEENGIPAFVKNEHMSGYAGEPGTGGQ--VEVYVPEEDYERAREILEEF 65 (67)
T ss_dssp HHHHHHHHTT--EE--S----SS---S--SSS--EEEEEEGGGHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcEEEECCccchhhcccCccCc--eEEEECHHHHHHHHHHHHHh
Confidence 34456667778998887432 233333345 99999999999888888764
No 110
>PF11460 DUF3007: Protein of unknown function (DUF3007); InterPro: IPR021562 This is a family of uncharacterised proteins found in bacteria and eukaryotes.
Probab=28.48 E-value=56 Score=24.73 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=19.1
Q ss_pred hHHHHHhcCCHHHHHHHHHHHH
Q 027723 162 NLKNILLSISEKRYRKMQMMVK 183 (219)
Q Consensus 162 ~l~~~L~~i~~~~~~~mr~~~~ 183 (219)
++.+.|+++|+|+.+++++.+.
T Consensus 82 ~lqkRle~l~~eE~~~L~~eie 103 (104)
T PF11460_consen 82 ELQKRLEELSPEELEALQAEIE 103 (104)
T ss_pred HHHHHHHhCCHHHHHHHHHHhc
Confidence 5888999999999999998764
No 111
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=27.49 E-value=2.8e+02 Score=24.11 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=23.7
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCC
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDN 137 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~ 137 (219)
+....|..|.+.+.+.| + -..||+. +=+|||+.+.
T Consensus 270 ~~~~l~~~ad~~v~~Sg-g----i~~Ea~~-~g~PvI~~~~ 304 (363)
T cd03786 270 YFLLLLKNADLVLTDSG-G----IQEEASF-LGVPVLNLRD 304 (363)
T ss_pred HHHHHHHcCcEEEEcCc-c----HHhhhhh-cCCCEEeeCC
Confidence 45566877999998887 3 1345544 4479998764
No 112
>PF13976 gag_pre-integrs: GAG-pre-integrase domain
Probab=27.08 E-value=30 Score=22.94 Aligned_cols=11 Identities=18% Similarity=0.455 Sum_probs=8.8
Q ss_pred HHHHHHhhhhh
Q 027723 206 HSIWYNRVFLA 216 (219)
Q Consensus 206 ~~l~~r~~~~~ 216 (219)
..+|++||+|-
T Consensus 24 ~~lWH~RLGH~ 34 (67)
T PF13976_consen 24 TDLWHRRLGHP 34 (67)
T ss_pred HHHHHHhcCCC
Confidence 47899999874
No 113
>cd04936 ACT_AKii-LysC-BS-like_2 ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis strain 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive AK isoenzymes. The B. subtilis strain 168 AKII is induced by methionine and repressed and inhibited by lysine. Although C. glutamicum is known to contain a single AK, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regu
Probab=25.80 E-value=88 Score=19.67 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=32.4
Q ss_pred chhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHh
Q 027723 118 SPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILL 168 (219)
Q Consensus 118 s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~ 168 (219)
..++++++.--.|+|..-.. ++ ..+++.|++++..++..+|+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~-----s~----~~is~~v~~~d~~~~~~~l~ 58 (63)
T cd04936 17 AAKMFEALAEAGINIEMIST-----SE----IKISCLIDEDDAEKAVRALH 58 (63)
T ss_pred HHHHHHHHHHCCCcEEEEEc-----cC----ceEEEEEeHHHHHHHHHHHH
Confidence 45799999999999976431 11 77899999999887777665
No 114
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=25.74 E-value=1.7e+02 Score=27.06 Aligned_cols=82 Identities=13% Similarity=0.175 Sum_probs=51.6
Q ss_pred CcchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHH
Q 027723 94 GKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSISEK 173 (219)
Q Consensus 94 ~~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~ 173 (219)
..++|.+.|++...-..+.-..-.---+.-.|.+| +||+++..-. |...+-=..+-|....+ .++..
T Consensus 255 pf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G-~~v~L~~~np--~~~~l~~~~ipVlf~~d----------~L~~~ 321 (360)
T PF07429_consen 255 PFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLG-KKVFLSRDNP--FWQDLKEQGIPVLFYGD----------ELDEA 321 (360)
T ss_pred CHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcC-CeEEEecCCh--HHHHHHhCCCeEEeccc----------cCCHH
Confidence 45789999999998888753322222466677777 6999987532 32222222333443333 44788
Q ss_pred HHHHHHHHHHHHhhh
Q 027723 174 RYRKMQMMVKKVQQH 188 (219)
Q Consensus 174 ~~~~mr~~~~~~~~~ 188 (219)
.+.++||++..+-+.
T Consensus 322 ~v~ea~rql~~~dk~ 336 (360)
T PF07429_consen 322 LVREAQRQLANVDKQ 336 (360)
T ss_pred HHHHHHHHHhhCccc
Confidence 899999999877654
No 115
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional
Probab=23.21 E-value=1.1e+02 Score=27.30 Aligned_cols=78 Identities=12% Similarity=0.144 Sum_probs=43.5
Q ss_pred EEEEeCCCCCCchh----HHHHHhcCcEeEEeeCCcc-----CCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHH
Q 027723 107 YCICAKGYEVHSPR----VVEAIFYECVPVIISDNFV-----PPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRK 177 (219)
Q Consensus 107 FCl~p~G~~~~s~R----l~dai~~GCIPVii~d~~~-----lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~ 177 (219)
++.||.|.+..... .=.|+.+|..|..=-+.-. -||. +| . ..+.|-+|.-......+.+.+|++++
T Consensus 209 ~sPC~~~~~~~~~~~~~~~klAvetg~~plye~~~g~~~~~~~~~~--ld-~--~~~~pv~~~l~~q~Rf~~L~~~~~~~ 283 (299)
T PRK11865 209 LQPCPTGWGFPPEKTIEIGRLAVETGYWPLFEIENGKFKITYEPLH--LD-R--RTRKPIEEYLKVQGRFKHLTEEDIEI 283 (299)
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHhcCceeEEEEECCeeccCCCccc--cc-c--cCCCCHHHHHhhCcchhcCCHHHHHH
Confidence 44556655432222 2346677999988544211 2333 33 1 22233333334444556778999999
Q ss_pred HHHHHHHHhhhe
Q 027723 178 MQMMVKKVQQHF 189 (219)
Q Consensus 178 mr~~~~~~~~~f 189 (219)
+|+.+.+-|+++
T Consensus 284 ~q~~v~~~~~~~ 295 (299)
T PRK11865 284 LQKYIDEKWKEL 295 (299)
T ss_pred HHHHHHHHHHHH
Confidence 999888877653
No 116
>cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY). This group contains various PA domain-containing proteins similar to the S. cerevisiae APY, including Trichophyton rubrum leucine aminopeptidase 1(LAP1). Proteins in this group belong to the peptidase M28 family. ScAPY hydrolyzes amino acid-4-methylcoumaryl-7-amides (MCAs). ScAPY more rapidly hydrolyzes dipeptidyl-MCAs. Hydrolysis of amino acid-MCAs or dipeptides is stimulated by Co2+ while the hydrolysis of dipeptidyl-MCAs, tripeptides, and longer peptides is inhibited by Co2+. ScAPY is vacuolar and is activated by proteolytic processing. LAP1 is a secreted leucine aminopeptidase. The significance of the PA domain to these proteins has not been ascertained. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stab
Probab=23.08 E-value=2.4e+02 Score=21.07 Aligned_cols=36 Identities=14% Similarity=0.079 Sum_probs=29.8
Q ss_pred cCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc
Q 027723 103 KSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF 138 (219)
Q Consensus 103 ~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~ 138 (219)
.+.+.+|+-+|.-........|..+|..=|||-++-
T Consensus 43 ~~gkIvlv~rg~c~f~~K~~~A~~aGA~~vIv~n~~ 78 (122)
T cd02130 43 VAGNIALIERGECPFGDKSALAGAAGAAAAIIYNNV 78 (122)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHCCCcEEEEEECC
Confidence 378899999988666677888999999999997644
No 117
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=22.68 E-value=7.6e+02 Score=25.23 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=79.9
Q ss_pred CCceEEEeeccCCC-ccH-HHH----HHHhh--cCCCCeEEeecCCCCCCCCcccCcchHHhhccCccEEEEeC--CCCC
Q 027723 47 QRSILAFFAGSMHG-YLR-PIL----LHHWE--NKDPDMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAK--GYEV 116 (219)
Q Consensus 47 ~R~~L~~F~G~~~~-~~R-~~L----~~~~~--~~~~~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCl~p~--G~~~ 116 (219)
.++.-+.|+|+.++ +.- +.+ .+.-+ ....++.+... .+..--..+...+.+-|.|+ |..+
T Consensus 511 ~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~----------Yd~~lA~~LvaG~DvwLn~prrp~EA 580 (778)
T cd04299 511 ERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLED----------YDMALARHLVQGVDVWLNTPRRPLEA 580 (778)
T ss_pred CCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcC----------CCHHHHHHHHhhhhhcccCCCCCCCC
Confidence 47888999999873 221 222 22222 11224444432 22334456777888888884 4666
Q ss_pred CchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcC------------CChhhHHHHHhc-------------CC
Q 027723 117 HSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLE------------RDIPNLKNILLS-------------IS 171 (219)
Q Consensus 117 ~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~------------~~~~~l~~~L~~-------------i~ 171 (219)
+...-+-|+.-|++=+=+-|+|.....+- -+-++ |.+ .|...|.++|+. +|
T Consensus 581 sGTSgMKA~~NG~LnlSvlDGww~E~~~g--~nGwa--ig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p 656 (778)
T cd04299 581 SGTSGMKAALNGGLNLSVLDGWWDEGYDG--ENGWA--IGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYP 656 (778)
T ss_pred CccchHHHHHcCCeeeecccCccccccCC--CCceE--eCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 66677788889999999999876554432 12222 323 233345555532 35
Q ss_pred HHHHHHHHHHHHHHhhheeecC
Q 027723 172 EKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
.+=+..|++.+..+.+.|.|+.
T Consensus 657 ~~W~~~~k~sm~~~~p~fs~~R 678 (778)
T cd04299 657 PGWVAMMKHSMATLGPRFSAER 678 (778)
T ss_pred HHHHHHHHHHHHhcccCCCHHH
Confidence 5666777888888888887765
No 118
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=21.81 E-value=1.6e+02 Score=26.04 Aligned_cols=86 Identities=15% Similarity=0.228 Sum_probs=49.6
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcc----cCCCCcEE--------------EEEcCC
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFE----ILNWESFA--------------VFVLER 158 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~----~idw~~fs--------------v~i~~~ 158 (219)
+..+.|+.+...+++.|. -..||+.+|| |||+.... -||.. .+..+.+. +..++.
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKV-SPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEA 326 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEcc-CHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCC
Confidence 567888899999997653 3449999997 77765432 22221 11111111 111233
Q ss_pred ChhhHHHHHhcC--CHHHHHHHHHHHHHHhhhe
Q 027723 159 DIPNLKNILLSI--SEKRYRKMQMMVKKVQQHF 189 (219)
Q Consensus 159 ~~~~l~~~L~~i--~~~~~~~mr~~~~~~~~~f 189 (219)
+..+|.+.+..+ +++..++|.++..++.+..
T Consensus 327 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 359 (380)
T PRK00025 327 TPEKLARALLPLLADGARRQALLEGFTELHQQL 359 (380)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 334454444443 5777888888887776654
No 119
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.36 E-value=1.1e+02 Score=28.45 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=50.8
Q ss_pred chhHHHHHhcCcEeEEeeCCcc---CCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHHHhhheeecC
Q 027723 118 SPRVVEAIFYECVPVIISDNFV---PPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 118 s~Rl~dai~~GCIPVii~d~~~---lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+.|+||++.+|- | .+++.+. .=|. |=+++.+.-...|+.++.+.|-+.++++.+--..+++++...+.|..
T Consensus 277 ~~RvFeiagc~~-~-liT~~~~~~e~~f~---pgk~~iv~~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~ 350 (373)
T COG4641 277 TNRVFEIAGCGG-F-LITDYWKDLEKFFK---PGKDIIVYQDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEE 350 (373)
T ss_pred hhhHHHHhhcCC-c-cccccHHHHHHhcC---CchheEEecCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHH
Confidence 789999999988 4 3444321 1122 23556666666788888888888888888777888889998866654
No 120
>PLN03194 putative disease resistance protein; Provisional
Probab=20.15 E-value=5.2e+02 Score=21.59 Aligned_cols=142 Identities=9% Similarity=0.075 Sum_probs=77.0
Q ss_pred ceEEEeeccC-CCccHHHHHHHhhcCCCCeEEeecCCC-CCCCCcccCcchHHhhccCccEEEEeCCC----C-CCchhH
Q 027723 49 SILAFFAGSM-HGYLRPILLHHWENKDPDMKIFGQMPK-AKGRGKRKGKTDYIQHMKSSKYCICAKGY----E-VHSPRV 121 (219)
Q Consensus 49 ~~L~~F~G~~-~~~~R~~L~~~~~~~~~~~~v~~~~~~-~~g~~~~~~~~~y~~~~~~S~FCl~p~G~----~-~~s~Rl 121 (219)
+.+++|.|.= ....-..|.+.+... ++.++-.-.. ..| ..-.....+.+.+|+++++.-.. + +.-.-|
T Consensus 28 DVFISFrG~DtR~~FvshL~~aL~~~--GI~vF~D~~el~~G---~~i~~~L~~AIeeSri~IvVfS~~Ya~S~WCLdEL 102 (187)
T PLN03194 28 DVFINHRGIDTKRTIATLLYDHLSRL--NLRPFLDNKNMKPG---DKLFDKINSAIRNCKVGVAVFSPRYCESYFCLHEL 102 (187)
T ss_pred cEEEeCCCccccccHHHHHHHHHHHC--CCEEEEcCccccCC---CcHHHHHHHHHHhCeEEEEEECCCcccchhHHHHH
Confidence 4677788842 122334455555543 4555432110 111 11123556789999999998443 2 222334
Q ss_pred HHHHhcC--cEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHHHhhheeecCC---CC
Q 027723 122 VEAIFYE--CVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRKMQMMVKKVQQHFLWHPR---PV 196 (219)
Q Consensus 122 ~dai~~G--CIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~mr~~~~~~~~~f~y~~~---~~ 196 (219)
..++..+ -|||+- . |+++++.... -..-+.+++.+=+.+|.++...-.|..+ ..
T Consensus 103 ~~I~e~~~~ViPIFY----~---------------VdPsdVr~q~--~~~~~~e~v~~Wr~AL~~va~l~G~~~~~~~~~ 161 (187)
T PLN03194 103 ALIMESKKRVIPIFC----D---------------VKPSQLRVVD--NGTCPDEEIRRFNWALEEAKYTVGLTFDSLKGN 161 (187)
T ss_pred HHHHHcCCEEEEEEe----c---------------CCHHHhhccc--cCCCCHHHHHHHHHHHHHHhccccccCCCCCCC
Confidence 4444443 466662 1 1122222110 0123578899999999999988666543 23
Q ss_pred CcCHHHHHHHHHHHHhhhhh
Q 027723 197 KYDIFHMILHSIWYNRVFLA 216 (219)
Q Consensus 197 ~~daf~~~l~~l~~r~~~~~ 216 (219)
+.+....|...+..+.+-+.
T Consensus 162 e~e~i~~iv~~v~k~l~~~~ 181 (187)
T PLN03194 162 WSEVVTMASDAVIKNLIELE 181 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 46678888888877766544
Done!