Query 027723
Match_columns 219
No_of_seqs 117 out of 724
Neff 6.9
Searched_HMMs 29240
Date Tue Mar 26 00:21:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027723.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027723hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 98.3 8.6E-06 3E-10 62.8 11.1 129 49-193 32-162 (166)
2 2bfw_A GLGA glycogen synthase; 97.8 0.00011 3.9E-09 58.0 9.6 90 95-188 106-198 (200)
3 3c48_A Predicted glycosyltrans 97.6 0.00065 2.2E-08 59.9 11.8 95 96-193 317-413 (438)
4 3okp_A GDP-mannose-dependent a 97.5 0.00055 1.9E-08 59.1 10.7 95 95-193 263-367 (394)
5 2gek_A Phosphatidylinositol ma 97.4 0.00028 9.7E-09 61.2 6.7 96 95-193 273-371 (406)
6 2jjm_A Glycosyl transferase, g 97.0 0.002 6.9E-08 56.1 8.6 96 95-193 275-373 (394)
7 2nzw_A Alpha1,3-fucosyltransfe 96.9 0.0088 3E-07 53.6 11.6 123 47-180 179-309 (371)
8 2r60_A Glycosyl transferase, g 96.9 0.0061 2.1E-07 55.0 10.7 96 95-193 345-447 (499)
9 2iw1_A Lipopolysaccharide core 96.9 0.0018 6.1E-08 55.5 6.7 96 95-193 261-359 (374)
10 1f0k_A MURG, UDP-N-acetylgluco 96.9 0.0035 1.2E-07 53.7 8.5 90 96-191 246-343 (364)
11 2f9f_A First mannosyl transfer 96.8 0.0027 9.1E-08 49.6 6.6 72 95-170 88-159 (177)
12 3fro_A GLGA glycogen synthase; 96.8 0.0024 8.2E-08 55.7 6.9 96 94-193 320-418 (439)
13 1rzu_A Glycogen synthase 1; gl 96.4 0.0086 2.9E-07 53.6 7.9 91 97-192 358-462 (485)
14 3oy2_A Glycosyltransferase B73 96.2 0.0056 1.9E-07 53.4 5.3 95 95-193 264-378 (413)
15 2x6q_A Trehalose-synthase TRET 96.1 0.019 6.5E-07 50.1 8.7 93 96-193 307-402 (416)
16 2iuy_A Avigt4, glycosyltransfe 96.1 0.0064 2.2E-07 51.8 5.4 74 95-172 222-307 (342)
17 3rhz_A GTF3, nucleotide sugar 95.5 0.015 5.2E-07 51.1 5.3 136 49-193 178-324 (339)
18 2x0d_A WSAF; GT4 family, trans 95.5 0.0072 2.5E-07 54.2 3.1 101 95-201 305-406 (413)
19 2vsy_A XCC0866; transferase, g 95.4 0.074 2.5E-06 48.5 9.8 84 96-193 445-547 (568)
20 2qzs_A Glycogen synthase; glyc 94.9 0.062 2.1E-06 47.9 7.5 92 96-192 358-463 (485)
21 1vgv_A UDP-N-acetylglucosamine 94.3 0.023 8E-07 48.8 3.2 77 96-181 274-352 (384)
22 3vue_A GBSS-I, granule-bound s 93.8 0.089 3.1E-06 48.8 6.2 94 95-193 392-499 (536)
23 3beo_A UDP-N-acetylglucosamine 93.6 0.056 1.9E-06 46.1 4.2 77 95-180 273-351 (375)
24 3s28_A Sucrose synthase 1; gly 92.0 0.18 6.3E-06 49.4 5.7 94 97-193 656-757 (816)
25 1uqt_A Alpha, alpha-trehalose- 89.9 0.6 2E-05 42.8 6.8 92 95-191 342-440 (482)
26 3nb0_A Glycogen [starch] synth 86.5 0.64 2.2E-05 45.0 4.7 95 96-193 510-621 (725)
27 2o6l_A UDP-glucuronosyltransfe 86.1 2.9 9.9E-05 31.5 7.6 83 99-188 79-167 (170)
28 3dzc_A UDP-N-acetylglucosamine 86.0 2.4 8.3E-05 37.2 8.0 94 95-208 298-394 (396)
29 3s2u_A UDP-N-acetylglucosamine 83.7 3.5 0.00012 35.7 7.9 82 96-185 244-338 (365)
30 2hy7_A Glucuronosyltransferase 82.6 1.6 5.6E-05 38.3 5.3 65 95-168 275-347 (406)
31 2ygg_A Sodium/hydrogen exchang 81.2 2.3 7.9E-05 28.8 4.4 46 170-215 4-54 (70)
32 1v4v_A UDP-N-acetylglucosamine 78.0 5.7 0.00019 33.6 7.1 76 96-180 266-343 (376)
33 3ot5_A UDP-N-acetylglucosamine 77.7 6.7 0.00023 34.5 7.7 94 96-208 293-388 (403)
34 3otg_A CALG1; calicheamicin, T 55.5 7.9 0.00027 33.0 3.3 87 97-188 301-393 (412)
35 3oti_A CALG3; calicheamicin, T 52.7 1E+02 0.0036 25.9 12.5 83 97-186 292-380 (398)
36 3h4t_A Glycosyltransferase GTF 52.2 55 0.0019 28.1 8.3 86 96-189 276-365 (404)
37 3t5t_A Putative glycosyltransf 47.2 27 0.00092 32.1 5.6 90 95-188 362-456 (496)
38 2iyf_A OLED, oleandomycin glyc 45.6 21 0.00073 30.6 4.5 84 99-187 294-383 (430)
39 3q3e_A HMW1C-like glycosyltran 42.5 30 0.001 32.9 5.2 109 95-211 509-626 (631)
40 2xci_A KDO-transferase, 3-deox 41.5 18 0.00063 31.1 3.4 85 96-185 269-359 (374)
41 2q2k_A Hypothetical protein; p 35.9 49 0.0017 21.3 3.8 40 149-188 25-65 (70)
42 2yjn_A ERYCIII, glycosyltransf 34.3 19 0.00066 31.3 2.4 79 98-181 329-413 (441)
43 1iir_A Glycosyltransferase GTF 33.8 27 0.00092 30.1 3.2 84 98-189 295-382 (415)
44 2xze_Q Charged multivesicular 31.3 35 0.0012 20.5 2.4 15 172-186 25-39 (40)
45 2iya_A OLEI, oleandomycin glyc 29.5 48 0.0016 28.4 4.1 68 98-170 315-386 (424)
46 1rrv_A Glycosyltransferase GTF 24.9 41 0.0014 28.8 2.8 86 97-190 295-384 (416)
47 3ksv_A Uncharacterized protein 24.3 1.1E+02 0.0038 22.8 4.9 64 121-188 14-80 (149)
48 4fzr_A SSFS6; structural genom 23.6 1.7E+02 0.0059 24.4 6.6 86 96-186 292-383 (398)
49 3o0m_A HIT family protein; ssg 21.7 86 0.003 23.3 3.8 50 132-187 21-73 (149)
50 1l5w_A Maltodextrin phosphoryl 21.2 2.5E+02 0.0086 27.3 7.6 51 94-144 614-666 (796)
51 3hbf_A Flavonoid 3-O-glucosylt 20.3 68 0.0023 28.7 3.3 88 99-190 338-432 (454)
52 3l7x_A SMU.412C, putative HIT- 20.1 75 0.0026 24.6 3.2 67 101-186 34-103 (173)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.27 E-value=8.6e-06 Score=62.80 Aligned_cols=129 Identities=15% Similarity=0.126 Sum_probs=83.7
Q ss_pred ceEEEeeccCCCccHHHHHHHhhcCCCCeEEeecCCCCCCCCcccCcchHHhhccCccEEEEeCCCCCCchhHHHHHhcC
Q 027723 49 SILAFFAGSMHGYLRPILLHHWENKDPDMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYE 128 (219)
Q Consensus 49 ~~L~~F~G~~~~~~R~~L~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~G 128 (219)
++-+.+.|. |..+..+.+..+.....+.+ +.. ...+..+.|..+..++.|.-.......++|||++|
T Consensus 32 ~~~l~i~G~--g~~~~~~~~~~~~~~~~v~~-g~~----------~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G 98 (166)
T 3qhp_A 32 DIVLLLKGK--GPDEKKIKLLAQKLGVKAEF-GFV----------NSNELLEILKTCTLYVHAANVESEAIACLEAISVG 98 (166)
T ss_dssp GEEEEEECC--STTHHHHHHHHHHHTCEEEC-CCC----------CHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT
T ss_pred CeEEEEEeC--CccHHHHHHHHHHcCCeEEE-eec----------CHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC
Confidence 566777774 34455555444332222333 322 24678899999999999976655678999999999
Q ss_pred cEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHHHhhheeecC
Q 027723 129 CVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 129 CIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
|+|||..+..- ...+++.-... .++..+..++.+.|..+ +++...+|.++.++..++|.|+.
T Consensus 99 ~vPvi~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 99 IVPVIANSPLS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp CCEEEECCTTC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred CCcEEeeCCCC-chhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence 99999944211 12233333333 56677777766666554 68888999999888778888764
No 2
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.81 E-value=0.00011 Score=58.00 Aligned_cols=90 Identities=19% Similarity=0.128 Sum_probs=66.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC---C
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI---S 171 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i---~ 171 (219)
..++.+.|..+.++++|.-....+..++|||++|| |||.++.- .+.+++ -....+.++..+..++.+.|..+ +
T Consensus 106 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVG--GLRDII-TNETGILVKAGDPGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCH--HHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-CEEEeCCC--ChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcC
Confidence 34788999999999999766666788999999998 67777642 223444 33445666777777766666554 7
Q ss_pred HHHHHHHHHHHHHHhhh
Q 027723 172 EKRYRKMQMMVKKVQQH 188 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~ 188 (219)
++.+.+|.++.++..+.
T Consensus 182 ~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 182 RSDLSKFRENCKKRAMS 198 (200)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88889999888876654
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.57 E-value=0.00065 Score=59.86 Aligned_cols=95 Identities=12% Similarity=0.080 Sum_probs=71.7
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 173 (219)
.+..+.|+.+..++.|.-.......++|||++|| |||.++.- ...+++.-....+.++..+..+|.+.|..+ +++
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 393 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVG--GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDE 393 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCT--THHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCC--ChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHH
Confidence 5788999999999999766666788999999999 88888742 234555545566778877887776666654 677
Q ss_pred HHHHHHHHHHHHhhheeecC
Q 027723 174 RYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 174 ~~~~mr~~~~~~~~~f~y~~ 193 (219)
...+|.++.++....|.|..
T Consensus 394 ~~~~~~~~~~~~~~~~s~~~ 413 (438)
T 3c48_A 394 TRIRMGEDAVEHARTFSWAA 413 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHH
Confidence 88888888887776666643
No 4
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=97.54 E-value=0.00055 Score=59.06 Aligned_cols=95 Identities=17% Similarity=0.156 Sum_probs=72.0
Q ss_pred cchHHhhccCccEEEEeCCC-------CCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHH
Q 027723 95 KTDYIQHMKSSKYCICAKGY-------EVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNIL 167 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~-------~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L 167 (219)
..+..+.|..+.+++.|.-. ......++|||++|| |||.++. -...+++.-. ..+.++..+..++.+.|
T Consensus 263 ~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~-PvI~~~~--~~~~e~i~~~-~g~~~~~~d~~~l~~~i 338 (394)
T 3okp_A 263 YQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGV-PVIAGTS--GGAPETVTPA-TGLVVEGSDVDKLSELL 338 (394)
T ss_dssp HHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTC-CEEECSS--TTGGGGCCTT-TEEECCTTCHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCC-CEEEeCC--CChHHHHhcC-CceEeCCCCHHHHHHHH
Confidence 36888999999999999765 556789999999995 8888774 2345666555 67778888888777777
Q ss_pred hcC--CHHHHHHHHHHHHHHh-hheeecC
Q 027723 168 LSI--SEKRYRKMQMMVKKVQ-QHFLWHP 193 (219)
Q Consensus 168 ~~i--~~~~~~~mr~~~~~~~-~~f~y~~ 193 (219)
..+ +++...+|.++.++.. ++|.|..
T Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 367 (394)
T 3okp_A 339 IELLDDPIRRAAMGAAGRAHVEAEWSWEI 367 (394)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTBHHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 665 6888889988877654 5577654
No 5
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=97.38 E-value=0.00028 Score=61.25 Aligned_cols=96 Identities=17% Similarity=0.131 Sum_probs=69.5
Q ss_pred cchHHhhccCccEEEEeCC-CCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 027723 95 KTDYIQHMKSSKYCICAKG-YEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--S 171 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G-~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~ 171 (219)
..+..+.|..+.+++.|.. .......++|||++|| |||.++.-. +.+.+.=....+.++..+..++.+.|..+ .
T Consensus 273 ~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~ 349 (406)
T 2gek_A 273 DATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDA--FRRVLADGDAGRLVPVDDADGMAAALIGILED 349 (406)
T ss_dssp HHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHH--HHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCc--HHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC
Confidence 4567899999999999953 4445778999999998 788777521 23444434555667777888777776665 6
Q ss_pred HHHHHHHHHHHHHHhhheeecC
Q 027723 172 EKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
++...+|.++.++..+.|.|..
T Consensus 350 ~~~~~~~~~~~~~~~~~~s~~~ 371 (406)
T 2gek_A 350 DQLRAGYVARASERVHRYDWSV 371 (406)
T ss_dssp HHHHHHHHHHHHHHGGGGBHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 7888889888887777766643
No 6
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.04 E-value=0.002 Score=56.05 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=72.3
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..+..++.|.-.......++|||++| +|||.++.- ...+++.=....+.++..+..+|.+.|..+ ++
T Consensus 275 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-~PvI~~~~~--~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 275 QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVG--GIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTT-CCEEEECCT--TSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCH
T ss_pred hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcC-CCEEEecCC--ChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence 4678899999999999976555678899999999 577777743 344566555567778888888777766554 67
Q ss_pred HHHHHHHHHHHHHh-hheeecC
Q 027723 173 KRYRKMQMMVKKVQ-QHFLWHP 193 (219)
Q Consensus 173 ~~~~~mr~~~~~~~-~~f~y~~ 193 (219)
+...+|.++.++.. +.|.|..
T Consensus 352 ~~~~~~~~~~~~~~~~~~s~~~ 373 (394)
T 2jjm_A 352 ELHRNMGERARESVYEQFRSEK 373 (394)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 88888988888766 7777654
No 7
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=96.90 E-value=0.0088 Score=53.62 Aligned_cols=123 Identities=12% Similarity=0.220 Sum_probs=81.6
Q ss_pred CCceEEEeeccCCCccHHHHHHHhhcCCCCeEEeecCCCCCCCCcccCcchHHhhccCccEEEEeCCC---CCCchhHHH
Q 027723 47 QRSILAFFAGSMHGYLRPILLHHWENKDPDMKIFGQMPKAKGRGKRKGKTDYIQHMKSSKYCICAKGY---EVHSPRVVE 123 (219)
Q Consensus 47 ~R~~L~~F~G~~~~~~R~~L~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~y~~~~~~S~FCl~p~G~---~~~s~Rl~d 123 (219)
+.+..+++++++....|..+.+.++..- .|.+.+.|-+..|. ......+.+++-||.|+..-. ...+--||+
T Consensus 179 K~k~v~wvvSnc~~~~R~~~~~~L~k~i-~Vd~~G~c~~~~~~----~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~ 253 (371)
T 2nzw_A 179 KRGFASFVASNPNAPIRNAFYDALNSIE-PVTGGGSVRNTLGY----NVKNKNEFLSQYKFNLCFENTQGYGYVTEKIID 253 (371)
T ss_dssp SSEEEEECCSCCCCHHHHHHHHHHTTTS-CCEECSSTTCCSSS----CCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHH
T ss_pred CceEEEEEEeCCCcHHHHHHHHHHhCcC-CEeeCCCccCCCCC----ccccHHHHHhcCcEEEEEeccCCCCcccHHHHH
Confidence 3444455566655457888888887543 47777777543221 124578889999999998643 567889999
Q ss_pred HHhcCcEeEEeeCCc---cCCCcccCCCCcEEEEEcCCChhhHHHHHhcCC--HHHHHHHHH
Q 027723 124 AIFYECVPVIISDNF---VPPFFEILNWESFAVFVLERDIPNLKNILLSIS--EKRYRKMQM 180 (219)
Q Consensus 124 ai~~GCIPVii~d~~---~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~--~~~~~~mr~ 180 (219)
|+.+|||||+++..- .+|=...|+..+| +...+|.+.|+.+. ++.+.++..
T Consensus 254 al~~g~VPI~~G~~~~~~~~Pp~SfI~~~dF------~s~~~La~yL~~L~~n~~~Y~~y~~ 309 (371)
T 2nzw_A 254 AYFSHTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAYLDMLY 309 (371)
T ss_dssp HHHTTCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHhCCeEEEEECCCchhhhCCCCceEEcccC------CCHHHHHHHHHHHhcCHHHHHHHHh
Confidence 999999999999742 2343444554444 34567888887763 566665553
No 8
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.89 E-value=0.0061 Score=54.96 Aligned_cols=96 Identities=21% Similarity=0.215 Sum_probs=68.0
Q ss_pred cchHHhhccCc----cEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC
Q 027723 95 KTDYIQHMKSS----KYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 95 ~~~y~~~~~~S----~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i 170 (219)
..+..+.|+.+ ..++.|.-......-++|||++|| |||.++.- ...+++.-....+.++..+..+|.+.|..+
T Consensus 345 ~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~--g~~e~v~~~~~g~l~~~~d~~~la~~i~~l 421 (499)
T 2r60_A 345 QQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNG--GPAEILDGGKYGVLVDPEDPEDIARGLLKA 421 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSB--HHHHHTGGGTSSEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCC--CHHHHhcCCceEEEeCCCCHHHHHHHHHHH
Confidence 35788999999 999999655556678999999998 78887732 223444434455667777887776666554
Q ss_pred --CHHHHHHHHHHHHHHhh-heeecC
Q 027723 171 --SEKRYRKMQMMVKKVQQ-HFLWHP 193 (219)
Q Consensus 171 --~~~~~~~mr~~~~~~~~-~f~y~~ 193 (219)
+++...+|.++.++... +|.|..
T Consensus 422 l~~~~~~~~~~~~a~~~~~~~fs~~~ 447 (499)
T 2r60_A 422 FESEETWSAYQEKGKQRVEERYTWQE 447 (499)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHSBHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 57778888887776554 487754
No 9
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=96.87 E-value=0.0018 Score=55.47 Aligned_cols=96 Identities=10% Similarity=0.038 Sum_probs=70.6
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEc-CCChhhHHHHHhcC--C
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVL-ERDIPNLKNILLSI--S 171 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~-~~~~~~l~~~L~~i--~ 171 (219)
..+..+.|..+..++.|.-....+.-++|||++|+ |||.++.- ...+.+.=....+.++ ..+..++.+.|..+ +
T Consensus 261 ~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~--~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 261 RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVC--GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ 337 (374)
T ss_dssp CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTS--TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC
T ss_pred cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCC--CchhhhccCCceEEeCCCCCHHHHHHHHHHHHcC
Confidence 45788999999999999755556788999999999 88888753 2234443345566776 66777766666554 6
Q ss_pred HHHHHHHHHHHHHHhhheeecC
Q 027723 172 EKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
++...+|.++.++....+.|..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~ 359 (374)
T 2iw1_A 338 SPLRMAWAENARHYADTQDLYS 359 (374)
T ss_dssp HHHHHHHHHHHHHHHHHSCCSC
T ss_pred hHHHHHHHHHHHHHHHHhhHHH
Confidence 8888999999888887765543
No 10
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=96.86 E-value=0.0035 Score=53.68 Aligned_cols=90 Identities=12% Similarity=0.065 Sum_probs=66.2
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCC------cccCCCCcEEEEEcCCC--hhhHHHHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPF------FEILNWESFAVFVLERD--IPNLKNIL 167 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF------~~~idw~~fsv~i~~~~--~~~l~~~L 167 (219)
.+..+.|..+..+++|.| ..-+.|||++|+ |||.++.--.|. .++++-.. .+.++..+ ..+|.+.|
T Consensus 246 ~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i 319 (364)
T 1f0k_A 246 DDMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTL 319 (364)
T ss_dssp SCHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHH
T ss_pred hhHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHH
Confidence 467899999999999976 567999999997 888876543332 12333344 77788877 78898888
Q ss_pred hcCCHHHHHHHHHHHHHHhhheee
Q 027723 168 LSISEKRYRKMQMMVKKVQQHFLW 191 (219)
Q Consensus 168 ~~i~~~~~~~mr~~~~~~~~~f~y 191 (219)
..++++...+|.++.++..+.|.|
T Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~ 343 (364)
T 1f0k_A 320 AGWSRETLLTMAERARAASIPDAT 343 (364)
T ss_dssp HTCCHHHHHHHHHHHHHTCCTTHH
T ss_pred HhcCHHHHHHHHHHHHHhhccCHH
Confidence 888777778888877766554443
No 11
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.79 E-value=0.0027 Score=49.63 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=49.4
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI 170 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i 170 (219)
..+..+.|+.+.+++.|.-......-++|||++|| |||.++.- .+.+.+.-....+.+ ..+..++.+.|..+
T Consensus 88 ~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l 159 (177)
T 2f9f_A 88 EEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEG--GFKETVINEKTGYLV-NADVNEIIDAMKKV 159 (177)
T ss_dssp HHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESSH--HHHHHCCBTTTEEEE-CSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCCC--CHHHHhcCCCccEEe-CCCHHHHHHHHHHH
Confidence 34578999999999998655445678999999998 77777642 233444434445555 67777666655544
No 12
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.78 E-value=0.0024 Score=55.67 Aligned_cols=96 Identities=21% Similarity=0.197 Sum_probs=70.2
Q ss_pred CcchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC---
Q 027723 94 GKTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--- 170 (219)
Q Consensus 94 ~~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--- 170 (219)
...+..+.|..+..++.|.-......-++|||++|+ |||.++.- ...++++=. ..+.++..+..++.+.|..+
T Consensus 320 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~--~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~ 395 (439)
T 3fro_A 320 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVG--GLRDIITNE-TGILVKAGDPGELANAILKALEL 395 (439)
T ss_dssp CHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESST--HHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCC--CcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhc
Confidence 356688999999999999766667788999999995 77777642 223445323 56677888887777666643
Q ss_pred CHHHHHHHHHHHHHHhhheeecC
Q 027723 171 SEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+++...+|.++.++..+.|.|..
T Consensus 396 ~~~~~~~~~~~~~~~~~~~s~~~ 418 (439)
T 3fro_A 396 SRSDLSKFRENCKKRAMSFSWEK 418 (439)
T ss_dssp TTTTTHHHHHHHHHHHHTSCHHH
T ss_pred CHHHHHHHHHHHHHHHhhCcHHH
Confidence 46778888888887777776643
No 13
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.38 E-value=0.0086 Score=53.60 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=61.1
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCC---------cEEEEEcCCChhhHHHHH
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE---------SFAVFVLERDIPNLKNIL 167 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~---------~fsv~i~~~~~~~l~~~L 167 (219)
...+.|+.+..++.|.-......-+.|||++|+ |||.++.- ...+++.=. ...+.++..+..+|.+.|
T Consensus 358 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~g--g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i 434 (485)
T 1rzu_A 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTG--GLADTVIDANHAALASKAATGVQFSPVTLDGLKQAI 434 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSH--HHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHH
T ss_pred HHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCC--ChhheecccccccccccCCcceEeCCCCHHHHHHHH
Confidence 346889999999999766556778999999997 66666642 122333222 455667887887776666
Q ss_pred hcC-----CHHHHHHHHHHHHHHhhheeec
Q 027723 168 LSI-----SEKRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 168 ~~i-----~~~~~~~mr~~~~~~~~~f~y~ 192 (219)
..+ +++...+|.++.++ +.|.|+
T Consensus 435 ~~ll~~~~~~~~~~~~~~~~~~--~~fs~~ 462 (485)
T 1rzu_A 435 RRTVRYYHDPKLWTQMQKLGMK--SDVSWE 462 (485)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHT--CCCBHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHH--HhCChH
Confidence 553 57777788776643 455543
No 14
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.15 E-value=0.0056 Score=53.44 Aligned_cols=95 Identities=13% Similarity=0.073 Sum_probs=65.0
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcE---------------EE--EEcC
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESF---------------AV--FVLE 157 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~f---------------sv--~i~~ 157 (219)
..+..+.|..+..++.|.-......-+.|||++|| |||.++.-- ..++++-..- .+ .++.
T Consensus 264 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g--~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~ 340 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGG--ADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGI 340 (413)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHH--HHHHSCTTTSEEECCCEEEECTTTCSSCCEEEE
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCC--hHHHHccCcccccccccccccccccCcceeeCC
Confidence 45788899999999999766556788999999996 888887421 1222211111 33 5566
Q ss_pred CChhhHHHHHhcC--CHHHHHHHHHHHHHHh-hheeecC
Q 027723 158 RDIPNLKNILLSI--SEKRYRKMQMMVKKVQ-QHFLWHP 193 (219)
Q Consensus 158 ~~~~~l~~~L~~i--~~~~~~~mr~~~~~~~-~~f~y~~ 193 (219)
.+..+|.+.| .+ +++...+|.++.++.. +.|.|+.
T Consensus 341 ~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 378 (413)
T 3oy2_A 341 IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDD 378 (413)
T ss_dssp CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHH
T ss_pred CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 6777776666 43 5777788888877664 6777654
No 15
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=96.14 E-value=0.019 Score=50.14 Aligned_cols=93 Identities=15% Similarity=0.055 Sum_probs=63.6
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 173 (219)
.+..+.|..+..++.|.-......-++|||++|+ |||.++.-- ..+++.=....+.++ +..+|.+.|..+ +++
T Consensus 307 ~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g--~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~ 381 (416)
T 2x6q_A 307 REVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGG--IKFQIVDGETGFLVR--DANEAVEVVLYLLKHPE 381 (416)
T ss_dssp HHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHH--HHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCC--ChhheecCCCeEEEC--CHHHHHHHHHHHHhCHH
Confidence 3678899999999999655556778999999998 888887421 223343233445555 666666555544 678
Q ss_pred HHHHHHHHHHHHh-hheeecC
Q 027723 174 RYRKMQMMVKKVQ-QHFLWHP 193 (219)
Q Consensus 174 ~~~~mr~~~~~~~-~~f~y~~ 193 (219)
...+|.++.++.. +.|.|+.
T Consensus 382 ~~~~~~~~a~~~~~~~fs~~~ 402 (416)
T 2x6q_A 382 VSKEMGAKAKERVRKNFIITK 402 (416)
T ss_dssp HHHHHHHHHHHHHHHHTBHHH
T ss_pred HHHHHHHHHHHHHHHHcCHHH
Confidence 8888888877654 5777643
No 16
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=96.12 E-value=0.0064 Score=51.75 Aligned_cols=74 Identities=16% Similarity=0.063 Sum_probs=54.7
Q ss_pred cchHHhhccCccEEEEeCC----------CCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCC--CcEEEEEcCCChhh
Q 027723 95 KTDYIQHMKSSKYCICAKG----------YEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNW--ESFAVFVLERDIPN 162 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G----------~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw--~~fsv~i~~~~~~~ 162 (219)
..+..+.|..+..++.|.- ......-++|||++|| |||.++.- ...+++.- ....+.++. +..+
T Consensus 222 ~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~~~~~g~~~~~-d~~~ 297 (342)
T 2iuy_A 222 GERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGNG--CLAEIVPSVGEVVGYGTDF-APDE 297 (342)
T ss_dssp HHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCTT--THHHHGGGGEEECCSSSCC-CHHH
T ss_pred HHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCCC--ChHHHhcccCCCceEEcCC-CHHH
Confidence 4466899999999999976 4556788999999997 88887742 23455544 445556677 8888
Q ss_pred HHHHHhcCCH
Q 027723 163 LKNILLSISE 172 (219)
Q Consensus 163 l~~~L~~i~~ 172 (219)
+.+.|..+-.
T Consensus 298 l~~~i~~l~~ 307 (342)
T 2iuy_A 298 ARRTLAGLPA 307 (342)
T ss_dssp HHHHHHTSCC
T ss_pred HHHHHHHHHH
Confidence 8888887754
No 17
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=95.51 E-value=0.015 Score=51.08 Aligned_cols=136 Identities=12% Similarity=0.143 Sum_probs=85.7
Q ss_pred ceEEEeeccCCCccHHHHHHHhhcCCCCeEEeecCCCCC----CCCcccCcchHHhhccCccEEEEeCCC-------CCC
Q 027723 49 SILAFFAGSMHGYLRPILLHHWENKDPDMKIFGQMPKAK----GRGKRKGKTDYIQHMKSSKYCICAKGY-------EVH 117 (219)
Q Consensus 49 ~~L~~F~G~~~~~~R~~L~~~~~~~~~~~~v~~~~~~~~----g~~~~~~~~~y~~~~~~S~FCl~p~G~-------~~~ 117 (219)
+..+.|+|++.. ....+.+. .+-.+.+++..+... .+.+.....+..+.|+++.|+|+.... ...
T Consensus 178 ~~~i~yaG~l~k---~~~L~~l~-~~~~f~ivG~G~~~~l~nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~ 253 (339)
T 3rhz_A 178 KREIHFPGNPER---FSFVKEWK-YDIPLKVYTWQNVELPQNVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYC 253 (339)
T ss_dssp EEEEEECSCTTT---CGGGGGCC-CSSCEEEEESCCCCCCTTEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCC
T ss_pred CcEEEEeCCcch---hhHHHhCC-CCCeEEEEeCCcccCcCCEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcC
Confidence 457889998852 11112121 223455565543211 011123456778888889999997111 112
Q ss_pred chhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHHHhhheeecC
Q 027723 118 SPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 118 s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
...++|+|++|+ |||+++.-.++ +++.=....+.++ ++.++.+.|..++++++.+|+++.++..+.+.++.
T Consensus 254 P~Kl~eymA~G~-PVI~~~~~~~~--~~v~~~~~G~~~~--~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~~~ 324 (339)
T 3rhz_A 254 SYKLGSFLAAGI-PVIVQEGIANQ--ELIENNGLGWIVK--DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRKGF 324 (339)
T ss_dssp CHHHHHHHHHTC-CEEEETTCTTT--HHHHHHTCEEEES--SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHTTH
T ss_pred hHHHHHHHHcCC-CEEEccChhHH--HHHHhCCeEEEeC--CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhccH
Confidence 357999999996 99987743322 3332234555554 47889999999999999999999999988766543
No 18
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.46 E-value=0.0072 Score=54.16 Aligned_cols=101 Identities=17% Similarity=0.152 Sum_probs=61.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcCC-HH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSIS-EK 173 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~-~~ 173 (219)
..+..+.|+.+..+++|.-....+.-++|||++|| |||.++. - ..++++=..-.+.++..+...|.+.|..+- +.
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~-g--~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY-E--NKDLSNWHSNIVSLEQLNPENIAETLVELCMSF 380 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB-T--TBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC-C--cchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCH
Confidence 56788999999999998543233567899999998 6776553 2 235665456677888889887777666542 22
Q ss_pred HHHHHHHHHHHHhhheeecCCCCCcCHH
Q 027723 174 RYRKMQMMVKKVQQHFLWHPRPVKYDIF 201 (219)
Q Consensus 174 ~~~~mr~~~~~~~~~f~y~~~~~~~daf 201 (219)
+..+ + +.++..+.|.|+.-....+-+
T Consensus 381 ~~~~-~-~~~~~~~~~~W~~~~~~~~~~ 406 (413)
T 2x0d_A 381 NNRD-V-DKKESSNMMFYINEFNEFSFI 406 (413)
T ss_dssp C---------CCBSCGGGCCCC---TTH
T ss_pred HHHH-H-hHHHHHHhCCHHHHHHHHHHH
Confidence 2211 1 334444678887654333333
No 19
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.42 E-value=0.074 Score=48.52 Aligned_cols=84 Identities=12% Similarity=0.188 Sum_probs=57.2
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEe-------eCCc-------cCCCcccCCCCcEEEEEcCCChh
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVII-------SDNF-------VPPFFEILNWESFAVFVLERDIP 161 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii-------~d~~-------~lPF~~~idw~~fsv~i~~~~~~ 161 (219)
.+..+.|..+..++.|.-. ....-+.|||.+|+ |||. ++.- -+ .+++ .++..
T Consensus 445 ~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~-Pvv~~~g~~~~s~~~~~~l~~~g~--~e~v----------~~~~~ 510 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPY-NAHTTASDALWTGC-PVLTTPGETFAARVAGSLNHHLGL--DEMN----------VADDA 510 (568)
T ss_dssp HHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC-CEEBCCCSSGGGSHHHHHHHHHTC--GGGB----------CSSHH
T ss_pred HHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC-CEEeccCCCchHHHHHHHHHHCCC--hhhh----------cCCHH
Confidence 4788999999999999766 56778999999996 9999 5532 22 1222 11455
Q ss_pred hHHHHHhcC--CHHHHHHHHHHHHHHh---hheeecC
Q 027723 162 NLKNILLSI--SEKRYRKMQMMVKKVQ---QHFLWHP 193 (219)
Q Consensus 162 ~l~~~L~~i--~~~~~~~mr~~~~~~~---~~f~y~~ 193 (219)
++.+.+..+ +++...+|+++.++.. +.|.|..
T Consensus 511 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 547 (568)
T 2vsy_A 511 AFVAKAVALASDPAALTALHARVDVLRRASGVFHMDG 547 (568)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHH
Confidence 444444333 5778888998887665 6666543
No 20
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=94.90 E-value=0.062 Score=47.93 Aligned_cols=92 Identities=9% Similarity=0.056 Sum_probs=62.4
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCC---------cEEEEEcCCChhhHHHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWE---------SFAVFVLERDIPNLKNI 166 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~---------~fsv~i~~~~~~~l~~~ 166 (219)
....+.|+.+..++.|.-......-+.|||++|+ |||.++.- .+.+++.=. ...+.++..+..+|.+.
T Consensus 358 ~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~g--g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~ 434 (485)
T 2qzs_A 358 AFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTG--GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRA 434 (485)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSH--HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCC--CccceeccCccccccccccceEEECCCCHHHHHHH
Confidence 3446889999999999765556778999999996 66666632 123444322 55677788888777666
Q ss_pred HhcC-----CHHHHHHHHHHHHHHhhheeec
Q 027723 167 LLSI-----SEKRYRKMQMMVKKVQQHFLWH 192 (219)
Q Consensus 167 L~~i-----~~~~~~~mr~~~~~~~~~f~y~ 192 (219)
|..+ +++...+|.++.++ +.|.|+
T Consensus 435 i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~ 463 (485)
T 2qzs_A 435 IRRAFVLWSRPSLWRFVQRQAMA--MDFSWQ 463 (485)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHH--CCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHh--hcCCHH
Confidence 6553 57777788776653 555553
No 21
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=94.35 E-value=0.023 Score=48.83 Aligned_cols=77 Identities=16% Similarity=0.112 Sum_probs=50.7
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 173 (219)
.+..+.|..+...+.|.|. . +.|||++|+ |||.++..- ...++++-. ..+.++. +..+|.+.+..+ +++
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~----~-~lEA~a~G~-PvI~~~~~~-~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGG----I-QEEAPSLGK-PVLVMRDTT-ERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp HHHHHHHHHCSEEEESSST----G-GGTGGGGTC-CEEEESSCC-SCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCcEEEECCcc----h-HHHHHHcCC-CEEEccCCC-CcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhChH
Confidence 5678889999998888732 2 789999997 999887521 123344333 5666665 666666665554 566
Q ss_pred HHHHHHHH
Q 027723 174 RYRKMQMM 181 (219)
Q Consensus 174 ~~~~mr~~ 181 (219)
...+|.++
T Consensus 345 ~~~~~~~~ 352 (384)
T 1vgv_A 345 EYQAMSRA 352 (384)
T ss_dssp HHHHHHSS
T ss_pred HHhhhhhc
Confidence 66666553
No 22
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.79 E-value=0.089 Score=48.82 Aligned_cols=94 Identities=11% Similarity=0.096 Sum_probs=55.7
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccC-CC-CcE--------EEEEcCCChhhHH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEIL-NW-ESF--------AVFVLERDIPNLK 164 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~i-dw-~~f--------sv~i~~~~~~~l~ 164 (219)
..+....++.+.+.++|.=..+...-+.|||++||.+|. ++.--+| |+| |- +-| ...++..+...|.
T Consensus 392 ~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~-s~~gG~~--e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 392 APLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCAC-ASTGGLV--DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEE-CSCTHHH--HHCCBTTTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEE-cCCCCch--heeeCCCCccccccCCCceeEECCCCHHHHH
Confidence 445667889999999997666677889999999986655 4421111 111 10 011 1123444454444
Q ss_pred H----HHhcCCHHHHHHHHHHHHHHhhheeecC
Q 027723 165 N----ILLSISEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 165 ~----~L~~i~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
+ .|....++.+.+|+++. +.+.|.|+.
T Consensus 469 ~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~ 499 (536)
T 3vue_A 469 ATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKG 499 (536)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHH
Confidence 3 44444566777887754 346788865
No 23
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=93.64 E-value=0.056 Score=46.14 Aligned_cols=77 Identities=14% Similarity=0.047 Sum_probs=50.1
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SE 172 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~ 172 (219)
..+..+.|..+.+.+.|.| .-+.|||++|+ |||.++..- ...++++-. ..+.++. +..+|.+.|..+ ++
T Consensus 273 ~~~~~~~~~~ad~~v~~sg-----~~~lEA~a~G~-Pvi~~~~~~-~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 273 VIDFHNVAARSYLMLTDSG-----GVQEEAPSLGV-PVLVLRDTT-ERPEGIEAG-TLKLAGT-DEETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHHHHTCSEEEECCH-----HHHHHHHHHTC-CEEECSSCC-SCHHHHHTT-SEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHhCcEEEECCC-----ChHHHHHhcCC-CEEEecCCC-CCceeecCC-ceEEcCC-CHHHHHHHHHHHHhCh
Confidence 3477889999999998862 23899999997 899885421 123445444 5556654 666666655554 45
Q ss_pred HHHHHHHH
Q 027723 173 KRYRKMQM 180 (219)
Q Consensus 173 ~~~~~mr~ 180 (219)
+...+|.+
T Consensus 344 ~~~~~~~~ 351 (375)
T 3beo_A 344 EAHDKMSK 351 (375)
T ss_dssp HHHHHHCC
T ss_pred HhHhhhhh
Confidence 55555544
No 24
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=91.96 E-value=0.18 Score=49.40 Aligned_cols=94 Identities=12% Similarity=0.069 Sum_probs=64.3
Q ss_pred hHHhhcc-CccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc------
Q 027723 97 DYIQHMK-SSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS------ 169 (219)
Q Consensus 97 ~y~~~~~-~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~------ 169 (219)
+....+. .+..++.|.=......-+.|||++|| |||.++.-- ..+++.=....+.++..+...+.+.|..
T Consensus 656 eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG--~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll 732 (816)
T 3s28_A 656 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGG--PAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732 (816)
T ss_dssp HHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBT--HHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCC--hHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhc
Confidence 4555566 45677778655556788999999997 788776322 2344544555677888888776665532
Q ss_pred CCHHHHHHHHHHHHHHh-hheeecC
Q 027723 170 ISEKRYRKMQMMVKKVQ-QHFLWHP 193 (219)
Q Consensus 170 i~~~~~~~mr~~~~~~~-~~f~y~~ 193 (219)
-+++...+|.++.++.. ++|.|+.
T Consensus 733 ~d~~~~~~m~~~ar~~a~~~fSwe~ 757 (816)
T 3s28_A 733 EDPSHWDEISKGGLQRIEEKYTWQI 757 (816)
T ss_dssp HCTHHHHHHHHHHHHHHHHSCCHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 15778888888887755 7888865
No 25
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=89.94 E-value=0.6 Score=42.76 Aligned_cols=92 Identities=11% Similarity=-0.077 Sum_probs=61.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCc----EeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc-
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYEC----VPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS- 169 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GC----IPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~- 169 (219)
..+....++.+.-|++|.=......-..|||++|+ -|||+++.--. .+.++ -.+.++..+...+.+.|..
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~--~~~l~---~g~lv~p~d~~~lA~ai~~l 416 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA--ANELT---SALIVNPYDRDEVAAALDRA 416 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG--GGTCT---TSEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC--HHHhC---CeEEECCCCHHHHHHHHHHH
Confidence 45778889999999998655445678999999998 68999873221 12233 3566888888766554433
Q ss_pred --CCHHHHHHHHHHHHHHhhheee
Q 027723 170 --ISEKRYRKMQMMVKKVQQHFLW 191 (219)
Q Consensus 170 --i~~~~~~~mr~~~~~~~~~f~y 191 (219)
.++++..+|.+++++....+.|
T Consensus 417 L~~~~~~r~~~~~~~~~~v~~~s~ 440 (482)
T 1uqt_A 417 LTMSLAERISRHAEMLDVIVKNDI 440 (482)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHTCH
T ss_pred HcCCHHHHHHHHHHHHHHHHhCCH
Confidence 2566666676666665555443
No 26
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=86.51 E-value=0.64 Score=44.95 Aligned_cols=95 Identities=9% Similarity=0.212 Sum_probs=63.7
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcc-cCCCC------cEEEEEcC---CC----hh
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFE-ILNWE------SFAVFVLE---RD----IP 161 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~-~idw~------~fsv~i~~---~~----~~ 161 (219)
.+|.+.|+.+...+.|.=..++..-..|||++|+ |||.++.--++ + +.+.. ...+.|+. .+ +.
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~--d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~ae 586 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFG--SYMEDLIETNQAKDYGIYIVDRRFKAPDESVE 586 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHH--HHHHTTSCHHHHHHTTEEEECCSSSCHHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChh--hhhhccccccCCCCceEEEeCCCCCCHHHHHH
Confidence 4799999999999999766778889999999997 56655532111 1 11111 12333322 22 23
Q ss_pred hHHHHHh---cCCHHHHHHHHHHHHHHhhheeecC
Q 027723 162 NLKNILL---SISEKRYRKMQMMVKKVQQHFLWHP 193 (219)
Q Consensus 162 ~l~~~L~---~i~~~~~~~mr~~~~~~~~~f~y~~ 193 (219)
.|.+.|. ..++++..+|+++.+++.+.|.|+.
T Consensus 587 aLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~ 621 (725)
T 3nb0_A 587 QLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKR 621 (725)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 4555554 3478888999999989999999976
No 27
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=86.08 E-value=2.9 Score=31.53 Aligned_cols=83 Identities=19% Similarity=0.157 Sum_probs=47.4
Q ss_pred Hhhc--cCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCC-cccCCCCcEEEEEcCCC--hhhHHHHHhcCCH
Q 027723 99 IQHM--KSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLERD--IPNLKNILLSISE 172 (219)
Q Consensus 99 ~~~~--~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF-~~~idw~~fsv~i~~~~--~~~l~~~L~~i~~ 172 (219)
.+.| ..+...++..|. .-++||+.+| +|+|+.+.. +.+. ...+......+.++..+ ..+|.+.|..+-.
T Consensus 79 ~~~l~~~~ad~~I~~~G~----~t~~Ea~~~G-~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGA----NGIYEAIYHG-IPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp HHHHTSTTEEEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred HHHhcCCCcCEEEEcCCc----cHHHHHHHcC-CCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHc
Confidence 4566 777777775553 4699999999 688886532 0000 11233456777787663 3466665554411
Q ss_pred HHHHHHHHHHHHHhhh
Q 027723 173 KRYRKMQMMVKKVQQH 188 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~ 188 (219)
. .+|+++.+++.+.
T Consensus 154 ~--~~~~~~a~~~~~~ 167 (170)
T 2o6l_A 154 D--PSYKENVMKLSRI 167 (170)
T ss_dssp C--HHHHHHHHHHC--
T ss_pred C--HHHHHHHHHHHHH
Confidence 1 1366666666554
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=86.00 E-value=2.4 Score=37.22 Aligned_cols=94 Identities=14% Similarity=0.126 Sum_probs=56.9
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFFEILNWESFAVFVLERDIPNLKNILLSI--S 171 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~ 171 (219)
..++...|+.|...+.+.| +. ..||+.+|+ |||+.++. ..| +.++=. ..+.++. +..+|.+.+..+ +
T Consensus 298 ~~~~~~l~~~ad~vv~~SG-g~----~~EA~a~G~-PvV~~~~~~~~~--e~v~~G-~~~lv~~-d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 298 YLPFVYLMDRAHIILTDSG-GI----QEEAPSLGK-PVLVMRETTERP--EAVAAG-TVKLVGT-NQQQICDALSLLLTD 367 (396)
T ss_dssp HHHHHHHHHHCSEEEESCS-GG----GTTGGGGTC-CEEECCSSCSCH--HHHHHT-SEEECTT-CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCEEEECCc-cH----HHHHHHcCC-CEEEccCCCcch--HHHHcC-ceEEcCC-CHHHHHHHHHHHHcC
Confidence 3578899999999988876 32 279999995 99987432 222 333322 2455554 555555555443 5
Q ss_pred HHHHHHHHHHHHHHhhheeecCCCCCcCHHHHHHHHH
Q 027723 172 EKRYRKMQMMVKKVQQHFLWHPRPVKYDIFHMILHSI 208 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f~y~~~~~~~daf~~~l~~l 208 (219)
++.+.+|.++ . .+-+.++|-..|+..|
T Consensus 368 ~~~~~~m~~~----~------~~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 368 PQAYQAMSQA----H------NPYGDGKACQRIADIL 394 (396)
T ss_dssp HHHHHHHHTS----C------CTTCCSCHHHHHHHHH
T ss_pred HHHHHHHhhc----c------CCCcCChHHHHHHHHH
Confidence 6667777652 1 1124567777776654
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=83.74 E-value=3.5 Score=35.66 Aligned_cols=82 Identities=16% Similarity=0.216 Sum_probs=55.6
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCc--c-------cCCCCcEEEEEcCCCh--hhHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFF--E-------ILNWESFAVFVLERDI--PNLK 164 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~--~-------~idw~~fsv~i~~~~~--~~l~ 164 (219)
.+..+.|..+...++-.|. .-+.|++.+|. |+|+-+ +|+. + .+--...++.++++++ .+|.
T Consensus 244 ~dm~~~l~~aDlvI~raG~----~Tv~E~~a~G~-P~Ilip---~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~ 315 (365)
T 3s2u_A 244 SDMAAAYAWADLVICRAGA----LTVSELTAAGL-PAFLVP---LPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELA 315 (365)
T ss_dssp SCHHHHHHHCSEEEECCCH----HHHHHHHHHTC-CEEECC--------CCHHHHHHHHHHTTTSEEECCTTTCCHHHHH
T ss_pred hhhhhhhccceEEEecCCc----chHHHHHHhCC-CeEEec---cCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHH
Confidence 4567899999999887663 35889999997 888732 3331 1 1334556888988875 3565
Q ss_pred HHHhcC--CHHHHHHHHHHHHHH
Q 027723 165 NILLSI--SEKRYRKMQMMVKKV 185 (219)
Q Consensus 165 ~~L~~i--~~~~~~~mr~~~~~~ 185 (219)
+.|..+ +++.+.+|.++.+++
T Consensus 316 ~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 316 AQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHT
T ss_pred HHHHHHHCCHHHHHHHHHHHHhc
Confidence 555554 578888998887765
No 30
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=82.58 E-value=1.6 Score=38.26 Aligned_cols=65 Identities=11% Similarity=0.211 Sum_probs=46.7
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHH-------hcCcEeEEeeCCccCCCcccCCCCcEEEE-EcCCChhhHHHH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAI-------FYECVPVIISDNFVPPFFEILNWESFAVF-VLERDIPNLKNI 166 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai-------~~GCIPVii~d~~~lPF~~~idw~~fsv~-i~~~~~~~l~~~ 166 (219)
..+..+.|+.+..++.|.-......-+.||| ++|+ |||.++. +.+ ....+. ++..+..+|.+.
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~-PVIas~~-------v~~-~~~G~l~v~~~d~~~la~a 345 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGL-PAVCPNA-------VVG-PYKSRFGYTPGNADSVIAA 345 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTC-CEEEEGG-------GTC-SCSSEEEECTTCHHHHHHH
T ss_pred HHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCC-cEEEehh-------ccc-CcceEEEeCCCCHHHHHHH
Confidence 3577889999999999965555667899999 9995 9998876 222 233444 777787766555
Q ss_pred Hh
Q 027723 167 LL 168 (219)
Q Consensus 167 L~ 168 (219)
|.
T Consensus 346 i~ 347 (406)
T 2hy7_A 346 IT 347 (406)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 31
>2ygg_A Sodium/hydrogen exchanger 1; metal binding protein-transport protein complex; HET: TAM; 2.23A {Homo sapiens}
Probab=81.20 E-value=2.3 Score=28.84 Aligned_cols=46 Identities=11% Similarity=0.210 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHH----HHHHhhh-eeecCCCCCcCHHHHHHHHHHHHhhhh
Q 027723 170 ISEKRYRKMQMM----VKKVQQH-FLWHPRPVKYDIFHMILHSIWYNRVFL 215 (219)
Q Consensus 170 i~~~~~~~mr~~----~~~~~~~-f~y~~~~~~~daf~~~l~~l~~r~~~~ 215 (219)
+++++.++||+- |.+++++ -.|+..+-+.|....-..|+..||+..
T Consensus 4 ls~~~~e~ir~IL~~NLykiRqr~~SYnRHtL~~d~~e~q~~EiLiRr~~s 54 (70)
T 2ygg_A 4 LSKDKEEEIRKILRNNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKA 54 (70)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhccccccccCCCCchHHHHHHHHHHHHhh
Confidence 566666666653 3355544 668888899999999999999999864
No 32
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=78.01 E-value=5.7 Score=33.56 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=46.2
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 173 (219)
.+..+.|..+...+.|.| +. +.||+++|+ |||+.+..- -..++++- ...+.++ .+..+|.+.+..+ +++
T Consensus 266 ~~~~~~~~~ad~~v~~S~----g~-~lEA~a~G~-PvI~~~~~~-~~~~~~~~-g~g~lv~-~d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 266 GSMAALMRASLLLVTDSG----GL-QEEGAALGV-PVVVLRNVT-ERPEGLKA-GILKLAG-TDPEGVYRVVKGLLENPE 336 (376)
T ss_dssp HHHHHHHHTEEEEEESCH----HH-HHHHHHTTC-CEEECSSSC-SCHHHHHH-TSEEECC-SCHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHhCcEEEECCc----CH-HHHHHHcCC-CEEeccCCC-cchhhhcC-CceEECC-CCHHHHHHHHHHHHhChH
Confidence 366789999998887752 22 779999997 888765321 11223322 2345554 3666665555443 566
Q ss_pred HHHHHHH
Q 027723 174 RYRKMQM 180 (219)
Q Consensus 174 ~~~~mr~ 180 (219)
...+|.+
T Consensus 337 ~~~~~~~ 343 (376)
T 1v4v_A 337 ELSRMRK 343 (376)
T ss_dssp HHHHHHH
T ss_pred hhhhhcc
Confidence 6666664
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=77.68 E-value=6.7 Score=34.51 Aligned_cols=94 Identities=18% Similarity=0.109 Sum_probs=54.8
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLSI--SEK 173 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i--~~~ 173 (219)
.++...|+.|.+.+.+.|. -..||+.+| +|||+.++.- -..+.++= ...+.++. +..+|.+.+..+ +++
T Consensus 293 ~~~~~l~~~ad~vv~~SGg-----~~~EA~a~g-~PvV~~~~~~-~~~e~v~~-g~~~lv~~-d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 293 IDFHNFLRKSYLVFTDSGG-----VQEEAPGMG-VPVLVLRDTT-ERPEGIEA-GTLKLIGT-NKENLIKEALDLLDNKE 363 (403)
T ss_dssp HHHHHHHHHEEEEEECCHH-----HHHHGGGTT-CCEEECCSSC-SCHHHHHH-TSEEECCS-CHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhcCEEEECCcc-----HHHHHHHhC-CCEEEecCCC-cchhheeC-CcEEEcCC-CHHHHHHHHHHHHcCHH
Confidence 4788999999987766531 127999999 5999874321 11123322 23444543 555555555443 567
Q ss_pred HHHHHHHHHHHHhhheeecCCCCCcCHHHHHHHHH
Q 027723 174 RYRKMQMMVKKVQQHFLWHPRPVKYDIFHMILHSI 208 (219)
Q Consensus 174 ~~~~mr~~~~~~~~~f~y~~~~~~~daf~~~l~~l 208 (219)
.+++|.++ ... | +.++|-..|+..|
T Consensus 364 ~~~~m~~~----~~~--~----g~~~aa~rI~~~l 388 (403)
T 3ot5_A 364 SHDKMAQA----ANP--Y----GDGFAANRILAAI 388 (403)
T ss_dssp HHHHHHHS----CCT--T----CCSCHHHHHHHHH
T ss_pred HHHHHHhh----cCc--c----cCCcHHHHHHHHH
Confidence 77777652 111 2 4467777776655
No 34
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=55.49 E-value=7.9 Score=33.04 Aligned_cols=87 Identities=7% Similarity=-0.039 Sum_probs=52.0
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCC-cccCCCCcEEEEEcCC--ChhhHHHHHhcC--
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLER--DIPNLKNILLSI-- 170 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF-~~~idw~~fsv~i~~~--~~~~l~~~L~~i-- 170 (219)
+..+.|..+...++..|. .-+.|||.+| +|||+.+.. ..+. .+.+.-....+.++.. +..+|.+.|..+
T Consensus 301 ~~~~~l~~ad~~v~~~g~----~t~~Ea~a~G-~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~ 375 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGS----GTTLGALGAG-VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA 375 (412)
T ss_dssp CHHHHGGGCSEEEESCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH
T ss_pred CHHHHHhcCcEEEECCch----HHHHHHHHhC-CCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh
Confidence 578899999988877664 3589999999 588885321 0000 0112223456667765 445565555543
Q ss_pred CHHHHHHHHHHHHHHhhh
Q 027723 171 SEKRYRKMQMMVKKVQQH 188 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~~~ 188 (219)
+++..++|.+..+++...
T Consensus 376 ~~~~~~~~~~~~~~~~~~ 393 (412)
T 3otg_A 376 EESYRAGARAVAAEIAAM 393 (412)
T ss_dssp CHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHhcC
Confidence 466666666655555443
No 35
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=52.74 E-value=1e+02 Score=25.91 Aligned_cols=83 Identities=10% Similarity=0.076 Sum_probs=49.0
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCC-ccCCC-c--ccCCCCcEEEEEcCCC--hhhHHHHHhcC
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDN-FVPPF-F--EILNWESFAVFVLERD--IPNLKNILLSI 170 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~-~~lPF-~--~~idw~~fsv~i~~~~--~~~l~~~L~~i 170 (219)
+..+.|..+...+...|.+ -+.||+.+| +|||+-+. ...+. . +.+......+.++..+ ...|.++|.
T Consensus 292 ~~~~ll~~ad~~v~~~G~~----t~~Eal~~G-~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~-- 364 (398)
T 3oti_A 292 PLHTLLRTCTAVVHHGGGG----TVMTAIDAG-IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIG-- 364 (398)
T ss_dssp CHHHHHTTCSEEEECCCHH----HHHHHHHHT-CCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHHHHHH--
T ss_pred CHHHHHhhCCEEEECCCHH----HHHHHHHhC-CCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHc--
Confidence 6778899988777765543 489999999 48887422 11111 1 1122234567777653 345666665
Q ss_pred CHHHHHHHHHHHHHHh
Q 027723 171 SEKRYRKMQMMVKKVQ 186 (219)
Q Consensus 171 ~~~~~~~mr~~~~~~~ 186 (219)
+++..++|++..+++.
T Consensus 365 ~~~~~~~~~~~~~~~~ 380 (398)
T 3oti_A 365 DESLRTAAREVREEMV 380 (398)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 3555556665555444
No 36
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=52.18 E-value=55 Score=28.08 Aligned_cols=86 Identities=8% Similarity=0.000 Sum_probs=51.0
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCCc-ccCCCCcEEEEEcCCCh--hhHHHHHhcCC
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFF-EILNWESFAVFVLERDI--PNLKNILLSIS 171 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF~-~~idw~~fsv~i~~~~~--~~l~~~L~~i~ 171 (219)
..+.++|.++...+.-.|.+ -+.||+.+| +|+|+-... ..++. ..+-+....+.++..++ .+|.+.++.+-
T Consensus 276 ~~~~~ll~~~d~~v~~gG~~----t~~Eal~~G-vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll 350 (404)
T 3h4t_A 276 VNHQVLFGRVAAVVHHGGAG----TTTAVTRAG-APQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATAL 350 (404)
T ss_dssp CCHHHHGGGSSEEEECCCHH----HHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHT
T ss_pred CCHHHHHhhCcEEEECCcHH----HHHHHHHcC-CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHh
Confidence 35678898888888877764 478999999 688874320 00000 11334456666765543 45666665543
Q ss_pred HHHHHHHHHHHHHHhhhe
Q 027723 172 EKRYRKMQMMVKKVQQHF 189 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f 189 (219)
. .+++++.+++...+
T Consensus 351 ~---~~~~~~~~~~~~~~ 365 (404)
T 3h4t_A 351 T---PGIRARAAAVAGTI 365 (404)
T ss_dssp S---HHHHHHHHHHHTTC
T ss_pred C---HHHHHHHHHHHHHH
Confidence 2 24566666666654
No 37
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=47.21 E-value=27 Score=32.06 Aligned_cols=90 Identities=12% Similarity=0.110 Sum_probs=54.6
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcC--cEeEEeeCCccCCCcccCCCCcEEEEEcCCChhhHHHHHhc---
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYE--CVPVIISDNFVPPFFEILNWESFAVFVLERDIPNLKNILLS--- 169 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~G--CIPVii~d~~~lPF~~~idw~~fsv~i~~~~~~~l~~~L~~--- 169 (219)
..++...++.+.-|++|.=.....--..|||++| --|||+++.--. .+.+ .+-++.|+..+...+.+.|..
T Consensus 362 ~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa--~~~l--~~~allVnP~D~~~lA~AI~~aL~ 437 (496)
T 3t5t_A 362 VNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA--AEVL--GEYCRSVNPFDLVEQAEAISAALA 437 (496)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT--HHHH--GGGSEEECTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC--HHHh--CCCEEEECCCCHHHHHHHHHHHHc
Confidence 4567888999999999854333445688999986 347777763211 1112 123677888888766555533
Q ss_pred CCHHHHHHHHHHHHHHhhh
Q 027723 170 ISEKRYRKMQMMVKKVQQH 188 (219)
Q Consensus 170 i~~~~~~~mr~~~~~~~~~ 188 (219)
.++++..++.+++++....
T Consensus 438 m~~~er~~r~~~~~~~V~~ 456 (496)
T 3t5t_A 438 AGPRQRAEAAARRRDAARP 456 (496)
T ss_dssp CCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 3655555555555544433
No 38
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=45.56 E-value=21 Score=30.64 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=48.0
Q ss_pred HhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCcc-CCC-cccCCCCcEEEEEcCC--ChhhHHHHHhcC--CH
Q 027723 99 IQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFV-PPF-FEILNWESFAVFVLER--DIPNLKNILLSI--SE 172 (219)
Q Consensus 99 ~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~-lPF-~~~idw~~fsv~i~~~--~~~~l~~~L~~i--~~ 172 (219)
.+.|..+...+...|. .-+.||+.+| +|||+.+... .++ .+.+......+.++.+ +..+|.+.|..+ ++
T Consensus 294 ~~~l~~ad~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 368 (430)
T 2iyf_A 294 LAILRQADLFVTHAGA----GGSQEGLATA-TPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDP 368 (430)
T ss_dssp HHHHTTCSEEEECCCH----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCH
T ss_pred HHHhhccCEEEECCCc----cHHHHHHHhC-CCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCH
Confidence 3788888876665443 3589999998 6888764310 000 1112223567777765 445565555544 45
Q ss_pred HHHHHHHHHHHHHhh
Q 027723 173 KRYRKMQMMVKKVQQ 187 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~ 187 (219)
+..++|.+..+++..
T Consensus 369 ~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 369 EVARRLRRIQAEMAQ 383 (430)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 555556555444443
No 39
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=42.48 E-value=30 Score=32.90 Aligned_cols=109 Identities=5% Similarity=0.038 Sum_probs=64.6
Q ss_pred cchHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCccCCCccc--------CCCCcEEEEEcCCChhhHHHH
Q 027723 95 KTDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEI--------LNWESFAVFVLERDIPNLKNI 166 (219)
Q Consensus 95 ~~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~~--------idw~~fsv~i~~~~~~~l~~~ 166 (219)
..+|.+.+..+.-+|-|.-.+ +..-..|||.+| +|||...+-.+. .. +.-.++.|.-.+++.-++--.
T Consensus 509 ~~e~la~y~~aDIfLDpfpy~-GgtTtlEALwmG-VPVVTl~G~~~a--sRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~ 584 (631)
T 3q3e_A 509 YHQYLRILHNCDMMVNPFPFG-NTNGIIDMVTLG-LVGVCKTGAEVH--EHIDEGLFKRLGLPEWLIANTVDEYVERAVR 584 (631)
T ss_dssp HHHHHHHHHTCSEEECCSSSC-CSHHHHHHHHTT-CCEEEECCSSHH--HHHHHHHHHHTTCCGGGEESSHHHHHHHHHH
T ss_pred HHHHHHHHhcCcEEEeCCccc-CChHHHHHHHcC-CCEEeccCCcHH--HHhHHHHHHhcCCCcceecCCHHHHHHHHHH
Confidence 467888999999999986554 356789999999 688875532110 00 011111111112222222222
Q ss_pred HhcCCHHHHHHHHHHHHHHhh-heeecCCCCCcCHHHHHHHHHHHH
Q 027723 167 LLSISEKRYRKMQMMVKKVQQ-HFLWHPRPVKYDIFHMILHSIWYN 211 (219)
Q Consensus 167 L~~i~~~~~~~mr~~~~~~~~-~f~y~~~~~~~daf~~~l~~l~~r 211 (219)
|.+ +++.+.+||+++++-.. .-.|+ +....|...+.++|.+
T Consensus 585 La~-D~~~l~~LR~~Lr~~~~~spLFd---~~~~~~e~~ye~~~~~ 626 (631)
T 3q3e_A 585 LAE-NHQERLELRRYIIENNGLNTLFT---GDPRPMGQVFLEKLNA 626 (631)
T ss_dssp HHH-CHHHHHHHHHHHHHSCCHHHHTC---SCCTHHHHHHHHHHHH
T ss_pred HhC-CHHHHHHHHHHHHHHhhhCCCcc---hhHHHHHHHHHHHHHH
Confidence 222 68889999999986643 23444 4466777777777654
No 40
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=41.48 E-value=18 Score=31.08 Aligned_cols=85 Identities=14% Similarity=0.144 Sum_probs=46.6
Q ss_pred chHHhhccCccEEEEeCCCC-CCchhHHHHHhcCcEeEEeeCCccCCCcccCC---CCcEEEEEcCCChhhHHHHHhcC-
Q 027723 96 TDYIQHMKSSKYCICAKGYE-VHSPRVVEAIFYECVPVIISDNFVPPFFEILN---WESFAVFVLERDIPNLKNILLSI- 170 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~-~~s~Rl~dai~~GCIPVii~d~~~lPF~~~id---w~~fsv~i~~~~~~~l~~~L~~i- 170 (219)
.+..+.|+.+..+++|.... ....-+.|||++|| |||.+++. --+.++++ -+.+.+.+ .+..+|.+.|..+
T Consensus 269 ~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~-PVI~~~~~-~~~~e~~~~~~~~G~l~~~--~d~~~La~ai~~ll 344 (374)
T 2xci_A 269 GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGI-PVIYGPYT-HKVNDLKEFLEKEGAGFEV--KNETELVTKLTELL 344 (374)
T ss_dssp SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTC-CEEECSCC-TTSHHHHHHHHHTTCEEEC--CSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCC-CEEECCCc-cChHHHHHHHHHCCCEEEe--CCHHHHHHHHHHHH
Confidence 56788999999877775432 22355899999997 77765432 11222221 13344333 4555444443332
Q ss_pred -CHHHHHHHHHHHHHH
Q 027723 171 -SEKRYRKMQMMVKKV 185 (219)
Q Consensus 171 -~~~~~~~mr~~~~~~ 185 (219)
+ +...+|.++.++.
T Consensus 345 ~d-~~r~~mg~~ar~~ 359 (374)
T 2xci_A 345 SV-KKEIKVEEKSREI 359 (374)
T ss_dssp HS-CCCCCHHHHHHHH
T ss_pred hH-HHHHHHHHHHHHH
Confidence 3 4455565555543
No 41
>2q2k_A Hypothetical protein; protein-DNA, partition, segregation, PARB, DNA binding protein/DNA complex; HET: DNA 5IU EPE; 3.00A {Staphylococcus aureus}
Probab=35.91 E-value=49 Score=21.30 Aligned_cols=40 Identities=8% Similarity=0.246 Sum_probs=29.9
Q ss_pred CcEEEEEcCCChhhHHHHHhcCCH-HHHHHHHHHHHHHhhh
Q 027723 149 ESFAVFVLERDIPNLKNILLSISE-KRYRKMQMMVKKVQQH 188 (219)
Q Consensus 149 ~~fsv~i~~~~~~~l~~~L~~i~~-~~~~~mr~~~~~~~~~ 188 (219)
.+-.+.|..+|.++|-++|+++|. ..-..+|+.+++..+.
T Consensus 25 tkhllkikkedypqifdflenvprgtktahirealrryiee 65 (70)
T 2q2k_A 25 TKHLLKIKKEDYPQIFDFLENVPRGTKTAHIREALRRYIEE 65 (70)
T ss_dssp EEEEEEEETTTSHHHHHHHTTSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhchHHHHHHHcCCCccchHHHHHHHHHHHHH
Confidence 356788999999999999999984 3445566666666554
No 42
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=34.31 E-value=19 Score=31.30 Aligned_cols=79 Identities=9% Similarity=-0.038 Sum_probs=46.2
Q ss_pred HHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCC-cccCCCCcEEEEEcCCC--hhhHHHHHhcC--C
Q 027723 98 YIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLERD--IPNLKNILLSI--S 171 (219)
Q Consensus 98 y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF-~~~idw~~fsv~i~~~~--~~~l~~~L~~i--~ 171 (219)
..+.|..+...++..|. .-+.||+.+| +|+|+.+.. +.++ ...+......+.++.++ ..+|.+.|+.+ +
T Consensus 329 ~~~ll~~ad~~V~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 403 (441)
T 2yjn_A 329 MHALLPTCAATVHHGGP----GSWHTAAIHG-VPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDD 403 (441)
T ss_dssp HHHHGGGCSEEEECCCH----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHhhCCEEEECCCH----HHHHHHHHhC-CCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcC
Confidence 46788999988886554 3589999999 688775431 0011 01233345677777663 34566555554 3
Q ss_pred HHHHHHHHHH
Q 027723 172 EKRYRKMQMM 181 (219)
Q Consensus 172 ~~~~~~mr~~ 181 (219)
++..++|++.
T Consensus 404 ~~~~~~~~~~ 413 (441)
T 2yjn_A 404 PAHRAGAARM 413 (441)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 43
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=33.77 E-value=27 Score=30.10 Aligned_cols=84 Identities=12% Similarity=-0.000 Sum_probs=50.6
Q ss_pred HHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCCc-ccCCCCcEEEEEcCCC--hhhHHHHHhcCCHH
Q 027723 98 YIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFF-EILNWESFAVFVLERD--IPNLKNILLSISEK 173 (219)
Q Consensus 98 y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF~-~~idw~~fsv~i~~~~--~~~l~~~L~~i~~~ 173 (219)
..+.|.++...++..|. .-+.||+.+| +|+|+-+.. ..++. ..+......+.++.++ ..+|.+.++.+ .+
T Consensus 295 ~~~~l~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 295 HQVLFGRVAAVIHHGGA----GTTHVAARAG-APQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LT 368 (415)
T ss_dssp HHHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS
T ss_pred hHHHHhhCCEEEeCCCh----hHHHHHHHcC-CCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC
Confidence 46778888888886665 3599999999 677775431 00000 1133345667777553 34677777766 22
Q ss_pred HHHHHHHHHHHHhhhe
Q 027723 174 RYRKMQMMVKKVQQHF 189 (219)
Q Consensus 174 ~~~~mr~~~~~~~~~f 189 (219)
.+++++.++..+.+
T Consensus 369 --~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 369 --PETHARATAVAGTI 382 (415)
T ss_dssp --HHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHHHH
Confidence 34555566565554
No 44
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=31.29 E-value=35 Score=20.46 Aligned_cols=15 Identities=20% Similarity=0.288 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHh
Q 027723 172 EKRYRKMQMMVKKVQ 186 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~ 186 (219)
++++.+||.+|.-++
T Consensus 25 Eedi~~MqsRLaALR 39 (40)
T 2xze_Q 25 EEALEAMQSRLATLR 39 (40)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 457899999998764
No 45
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=29.46 E-value=48 Score=28.40 Aligned_cols=68 Identities=13% Similarity=0.199 Sum_probs=39.9
Q ss_pred HHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCcc-CCCc-ccCCCCcEEEEEcCC--ChhhHHHHHhcC
Q 027723 98 YIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFV-PPFF-EILNWESFAVFVLER--DIPNLKNILLSI 170 (219)
Q Consensus 98 y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~-lPF~-~~idw~~fsv~i~~~--~~~~l~~~L~~i 170 (219)
..+.|..+...++-.|. .-+.||+.+| +|+|+.+... .++. ..+......+.++.+ +..+|.+.|+.+
T Consensus 315 ~~~~l~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 386 (424)
T 2iya_A 315 QLDILTKASAFITHAGM----GSTMEALSNA-VPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAV 386 (424)
T ss_dssp HHHHHTTCSEEEECCCH----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHHHhhCCEEEECCch----hHHHHHHHcC-CCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHH
Confidence 34788888866654443 3589999999 6888865321 1110 113234567777755 334566655554
No 46
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=24.93 E-value=41 Score=28.84 Aligned_cols=86 Identities=13% Similarity=0.072 Sum_probs=51.4
Q ss_pred hHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCCc-ccCCCCcEEEEEcCCC--hhhHHHHHhcCCH
Q 027723 97 DYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFF-EILNWESFAVFVLERD--IPNLKNILLSISE 172 (219)
Q Consensus 97 ~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF~-~~idw~~fsv~i~~~~--~~~l~~~L~~i~~ 172 (219)
...+.|..+...++-.|. .-+.||+.+| +|+|+-+.. +.++. ..+......+.++.++ ..+|.+.|+.+ .
T Consensus 295 ~~~~ll~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~ 368 (416)
T 1rrv_A 295 NFQALFRRVAAVIHHGSA----GTEHVATRAG-VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-L 368 (416)
T ss_dssp CHHHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-T
T ss_pred ChHHHhccCCEEEecCCh----hHHHHHHHcC-CCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-h
Confidence 356788888888875553 3689999999 688775431 00100 1133345566776544 34677777766 2
Q ss_pred HHHHHHHHHHHHHhhhee
Q 027723 173 KRYRKMQMMVKKVQQHFL 190 (219)
Q Consensus 173 ~~~~~mr~~~~~~~~~f~ 190 (219)
+ .+++++.+++.+.+.
T Consensus 369 ~--~~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 369 A--PETRARAEAVAGMVL 384 (416)
T ss_dssp S--HHHHHHHHHHTTTCC
T ss_pred C--HHHHHHHHHHHHHHh
Confidence 2 246666666666644
No 47
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=24.32 E-value=1.1e+02 Score=22.81 Aligned_cols=64 Identities=9% Similarity=0.154 Sum_probs=38.3
Q ss_pred HHHHHhcCcEe--EEeeCCccCCCcccCC-CCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHHHhhh
Q 027723 121 VVEAIFYECVP--VIISDNFVPPFFEILN-WESFAVFVLERDIPNLKNILLSISEKRYRKMQMMVKKVQQH 188 (219)
Q Consensus 121 l~dai~~GCIP--Vii~d~~~lPF~~~id-w~~fsv~i~~~~~~~l~~~L~~i~~~~~~~mr~~~~~~~~~ 188 (219)
+|--|..|=|| +|..|+..+-|-+.-+ |.--.+.||...+.++ ..++++++.+|-.-++++.+.
T Consensus 14 iFc~Ii~geip~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l----~dL~~~e~~~l~~~~~~v~~~ 80 (149)
T 3ksv_A 14 IFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASCL----HELGMEDAADVGVLLAKASRA 80 (149)
T ss_dssp HHHHHHHTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSG----GGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhh----hhCCHHHHHHHHHHHHHHHHH
Confidence 55555556665 5666665433333322 3334777888777654 456788888777766666554
No 48
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=23.56 E-value=1.7e+02 Score=24.42 Aligned_cols=86 Identities=9% Similarity=-0.006 Sum_probs=46.6
Q ss_pred chHHhhccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCC-cccCCCCcEEEEEcCCC--hhhHHHHHhcC-
Q 027723 96 TDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPF-FEILNWESFAVFVLERD--IPNLKNILLSI- 170 (219)
Q Consensus 96 ~~y~~~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF-~~~idw~~fsv~i~~~~--~~~l~~~L~~i- 170 (219)
..+.++|..+...+...|.+ -+.||+.+| +|||+.+.. ..+. .+.+......+.++.++ ...|.+.++.+
T Consensus 292 ~~~~~ll~~ad~~v~~gG~~----t~~Ea~~~G-~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll 366 (398)
T 4fzr_A 292 FPLSAIMPACDVVVHHGGHG----TTLTCLSEG-VPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIR 366 (398)
T ss_dssp CCHHHHGGGCSEEEECCCHH----HHHHHHHTT-CCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHH
T ss_pred CCHHHHHhhCCEEEecCCHH----HHHHHHHhC-CCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHH
Confidence 35788899999888776633 489999999 588874321 0000 01133345666676543 23444443332
Q ss_pred -CHHHHHHHHHHHHHHh
Q 027723 171 -SEKRYRKMQMMVKKVQ 186 (219)
Q Consensus 171 -~~~~~~~mr~~~~~~~ 186 (219)
+++..++|++..+++.
T Consensus 367 ~~~~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 367 DDSSYVGNARRLAAEMA 383 (398)
T ss_dssp HCTHHHHHHHHHHHHHT
T ss_pred hCHHHHHHHHHHHHHHH
Confidence 3555556665544443
No 49
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=21.68 E-value=86 Score=23.29 Aligned_cols=50 Identities=8% Similarity=0.077 Sum_probs=29.9
Q ss_pred EEeeCCcc---CCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHHHhh
Q 027723 132 VIISDNFV---PPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRKMQMMVKKVQQ 187 (219)
Q Consensus 132 Vii~d~~~---lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~mr~~~~~~~~ 187 (219)
+|..++.. +|+....+| -.+.||...+.++. .++++++.+|-+.++++.+
T Consensus 21 iv~e~~~~~af~d~~p~~pg--h~lViPk~H~~~l~----dl~~~~~~~l~~~~~~v~~ 73 (149)
T 3o0m_A 21 RIYEDENFLGILDIRPFTRG--HTLVIPKTHTVDLT----DTPPETVAGMAAVGQRIAR 73 (149)
T ss_dssp EEEECSSEEEEECSSCSSTT--CEEEEESSCCCSTT----TSCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCEEEEEcCCCCCCC--eEEEEechhhCCHh----HCCHHHHHHHHHHHHHHHH
Confidence 55555543 444444333 35778887776543 4577888877766665554
No 50
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=21.18 E-value=2.5e+02 Score=27.34 Aligned_cols=51 Identities=10% Similarity=-0.030 Sum_probs=40.1
Q ss_pred CcchHHhhccCccEEEEe--CCCCCCchhHHHHHhcCcEeEEeeCCccCCCcc
Q 027723 94 GKTDYIQHMKSSKYCICA--KGYEVHSPRVVEAIFYECVPVIISDNFVPPFFE 144 (219)
Q Consensus 94 ~~~~y~~~~~~S~FCl~p--~G~~~~s~Rl~dai~~GCIPVii~d~~~lPF~~ 144 (219)
+...-..++..+..-+.| +|..++...-+-++..|++|+=.-|++..++.+
T Consensus 614 ~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e 666 (796)
T 1l5w_A 614 CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAE 666 (796)
T ss_dssp CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHH
T ss_pred CHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhh
Confidence 344556788899999998 467788888999999999999777777665543
No 51
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=20.27 E-value=68 Score=28.73 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=51.2
Q ss_pred HhhccCcc-EEEEeCCCCCCchhHHHHHhcCcEeEEeeCCc-cCCCcc-cCCCC-cEEEEEcCCChh--hHHHHHhcC-C
Q 027723 99 IQHMKSSK-YCICAKGYEVHSPRVVEAIFYECVPVIISDNF-VPPFFE-ILNWE-SFAVFVLERDIP--NLKNILLSI-S 171 (219)
Q Consensus 99 ~~~~~~S~-FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~-~lPF~~-~idw~-~fsv~i~~~~~~--~l~~~L~~i-~ 171 (219)
.+.|.... =|.+-+|.. ..+.||+.+| +|+|+...+ +.++.- .+-.. .+.+.+...++. +|.+.++.+ .
T Consensus 338 ~~vL~h~~v~~fvtH~G~---~S~~Eal~~G-vP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~ 413 (454)
T 3hbf_A 338 VEILKHSSVGVFLTHSGW---NSVLECIVGG-VPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMS 413 (454)
T ss_dssp HHHHHSTTEEEEEECCCH---HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHS
T ss_pred HHHHhhcCcCeEEecCCc---chHHHHHHcC-CCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHC
Confidence 46666554 344445442 3689999999 588885431 111111 13333 677888775553 455555443 3
Q ss_pred HHHHHHHHHHHHHHhhhee
Q 027723 172 EKRYRKMQMMVKKVQQHFL 190 (219)
Q Consensus 172 ~~~~~~mr~~~~~~~~~f~ 190 (219)
+++-.+||++.+++.+.+.
T Consensus 414 ~~~~~~~r~~a~~l~~~~~ 432 (454)
T 3hbf_A 414 SEKGGIMRQKIVKLKESAF 432 (454)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHH
Confidence 4556678888887776643
No 52
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=20.07 E-value=75 Score=24.60 Aligned_cols=67 Identities=12% Similarity=0.174 Sum_probs=38.1
Q ss_pred hccCccEEEEeCCCCCCchhHHHHHhcCcEeEEeeCCcc---CCCcccCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHH
Q 027723 101 HMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFV---PPFFEILNWESFAVFVLERDIPNLKNILLSISEKRYRK 177 (219)
Q Consensus 101 ~~~~S~FCl~p~G~~~~s~Rl~dai~~GCIPVii~d~~~---lPF~~~idw~~fsv~i~~~~~~~l~~~L~~i~~~~~~~ 177 (219)
.|.++.||-+..|.-+.. ||..++.. +|+....+| -.+.||...+.++. .++++++.+
T Consensus 34 ~m~~CiFC~Ii~~e~p~~-------------iV~e~e~~~afld~~P~~pg--H~LVIPkrHv~~l~----dL~~ee~~~ 94 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIPSS-------------KVYEDEDVLAFLDISQATKG--HTLVIPKEHVRNAL----EMTQTQAAN 94 (173)
T ss_dssp CCTTCHHHHHHHTSSCCC-------------EEEECSSEEEEECTTCSSTT--CEEEEESSCCSCGG----GCCHHHHHH
T ss_pred CCCCCcccccccCCCCce-------------EEEECCCEEEEEcCCCCCCc--EEEEEeccccCChh----hCCHHHHHH
Confidence 456677777766654321 56666543 444443233 36778887766543 357777766
Q ss_pred HHHHHHHHh
Q 027723 178 MQMMVKKVQ 186 (219)
Q Consensus 178 mr~~~~~~~ 186 (219)
|-..++++.
T Consensus 95 L~~~~~~v~ 103 (173)
T 3l7x_A 95 LFARIPKIA 103 (173)
T ss_dssp HHHTHHHHH
T ss_pred HHHHHHHHH
Confidence 665554444
Done!