BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027724
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B8HUU1|NDHN_CYAP4 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=ndhN PE=3 SV=1
Length = 158
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 98/147 (66%), Gaps = 7/147 (4%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ D+EK A+ IY P EGG+EGRY RLR GY L +SA GLGD + LT+V+ V P
Sbjct: 9 QFIQDLEKSGALGIYVPSEGGFEGRYQRRLRAAGYSTLHISAPGLGDLPSYLTQVHGVRP 68
Query: 132 AHVGKQP-------IARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 184
H+GK + ++ PP V+Y L LPP A+GLV+W+I+ K LS+ EL +L++LP
Sbjct: 69 PHLGKSTQGNTDWGVKTFFLPPLVNYHLENLPPKARGLVLWMIDGKRLSRQELAYLSILP 128
Query: 185 TLRPKVRVIAECGNWRKFMWKPLKEIA 211
PKV+++ E G R+F W+PLKE+A
Sbjct: 129 AQEPKVKIVIELGGDRQFRWQPLKEMA 155
>sp|B7JYJ3|NDHN_CYAP8 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 8801) GN=ndhN PE=3 SV=1
Length = 158
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 96/145 (66%), Gaps = 7/145 (4%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPA 132
++ +EK ++A+Y P EGG+EGRY RLR GY+ L+ARGLGD L V+ V P
Sbjct: 10 FIRALEKSGSLAVYAPLEGGFEGRYQRRLRTNGYHTFSLTARGLGDVSAYLMGVHGVRPP 69
Query: 133 HVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 185
H+GK+ I + ++ PP Y+L LPP +KGLV+WI+E +LS++EL++LA LPT
Sbjct: 70 HLGKKNIGQEAAVGPVYFVPPIAAYQLETLPPKSKGLVLWILEGFILSQTELEYLANLPT 129
Query: 186 LRPKVRVIAECGNWRKFMWKPLKEI 210
L P+++V+ E G R F WKPL E+
Sbjct: 130 LEPRLKVVIELGGERYFSWKPLPEV 154
>sp|Q8YPH8|NDHN_NOSS1 NAD(P)H-quinone oxidoreductase subunit N OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ndhN PE=3 SV=1
Length = 162
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 7/143 (4%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAH 133
+ D+EK ++ +Y P EGG+EGRY RLR GY L +ARGLGD LT V+ V P H
Sbjct: 11 IRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRPPH 70
Query: 134 VGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTL 186
+GK+ +Y PP V +L LPP +KGLV+WIIE +LS E++FL LP+L
Sbjct: 71 LGKKSSGNGAAVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQEVEFLTSLPSL 130
Query: 187 RPKVRVIAECGNWRKFMWKPLKE 209
P+V+V+ E G R F WK LK+
Sbjct: 131 EPRVKVVVERGGDRTFRWKALKD 153
>sp|Q110A6|NDHN_TRIEI NAD(P)H-quinone oxidoreductase subunit N OS=Trichodesmium
erythraeum (strain IMS101) GN=ndhN PE=3 SV=1
Length = 158
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 92/143 (64%), Gaps = 7/143 (4%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAH 133
+ D+EK ++A+Y P EGG+EGRY RLR GY ++ARGLGD LT V+ V P H
Sbjct: 11 IRDLEKSGSLAVYPPLEGGFEGRYQRRLRASGYVSESITARGLGDLAMYLTGVHGVRPPH 70
Query: 134 VGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTL 186
+GK+ + +Y PP V+Y+L LPP AKGLV+WI+E ++LS E+++L +LP
Sbjct: 71 LGKKTVGNGPAVGYVYYVPPIVNYKLEHLPPKAKGLVLWIMEGQILSSQEIEYLTVLPKS 130
Query: 187 RPKVRVIAECGNWRKFMWKPLKE 209
P+V+VI E G R F W PL+
Sbjct: 131 EPRVKVIVEMGGDRFFRWTPLQN 153
>sp|Q3MFC2|NDHN_ANAVT NAD(P)H-quinone oxidoreductase subunit N OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=ndhN PE=3 SV=1
Length = 162
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 88/143 (61%), Gaps = 7/143 (4%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAH 133
+ D+EK ++ +Y P EGG+EGRY RLR GY L +ARGLGD LT V+ V P H
Sbjct: 11 IRDLEKFGSVGVYVPLEGGFEGRYRRRLRAAGYTTLQFTARGLGDVAAYLTGVHGVRPPH 70
Query: 134 VGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTL 186
+GK+ +Y PP V +L LPP +KGLV+WIIE +LS E++FL LP L
Sbjct: 71 LGKKSSGNGAAVGNVYYLPPIVGSQLEHLPPKSKGLVLWIIEGHILSDQEVEFLTDLPKL 130
Query: 187 RPKVRVIAECGNWRKFMWKPLKE 209
P+V+V+ E G R F WK LK+
Sbjct: 131 EPRVKVVVERGGDRTFRWKALKD 153
>sp|B2ITQ6|NDHN_NOSP7 NAD(P)H-quinone oxidoreductase subunit N OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=ndhN PE=3 SV=1
Length = 158
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 89/143 (62%), Gaps = 7/143 (4%)
Query: 74 LSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAH 133
+ D+EK A+ +Y P EGGYEGRY RLR GY L ++A+GLGD LT+++ V P H
Sbjct: 11 IRDLEKFGALGVYVPLEGGYEGRYQRRLRAAGYTTLHITAKGLGDVAAYLTRIHGVRPPH 70
Query: 134 VGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTL 186
+GK+ +Y PP +D L LPP +KGLV+WIIE +LS EL++L LP L
Sbjct: 71 LGKKSTGSGAAVGQVYYLPPILDSHLEQLPPKSKGLVLWIIEGHILSNEELEYLTNLPQL 130
Query: 187 RPKVRVIAECGNWRKFMWKPLKE 209
P+V+V+ E G R F W L++
Sbjct: 131 EPRVKVVIERGGDRAFRWTSLEK 153
>sp|Q5N0W6|NDHN_SYNP6 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndhN
PE=3 SV=1
Length = 158
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 88/147 (59%), Gaps = 7/147 (4%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++L +E+ A+A+Y P EGGYEGRYL RLR GY L SARGLGDP L ++ V P
Sbjct: 9 KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68
Query: 132 AHVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 184
H+GKQ I Y P V Y L LP +AKGLV+W++E VLS EL + LP
Sbjct: 69 PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128
Query: 185 TLRPKVRVIAECGNWRKFMWKPLKEIA 211
P+++V+ E G R F W+PL +A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVA 155
>sp|Q31L05|NDHN_SYNE7 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus
(strain PCC 7942) GN=ndhN PE=3 SV=1
Length = 158
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 88/147 (59%), Gaps = 7/147 (4%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++L +E+ A+A+Y P EGGYEGRYL RLR GY L SARGLGDP L ++ V P
Sbjct: 9 KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68
Query: 132 AHVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 184
H+GKQ I Y P V Y L LP +AKGLV+W++E VLS EL + LP
Sbjct: 69 PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128
Query: 185 TLRPKVRVIAECGNWRKFMWKPLKEIA 211
P+++V+ E G R F W+PL +A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVA 155
>sp|B7KEE5|NDHN_CYAP7 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
PCC 7424) GN=ndhN PE=3 SV=1
Length = 158
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 94/144 (65%), Gaps = 7/144 (4%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPA 132
++ +EK A+ +Y P EGG+EGRY RLR GY +L+ARGLGD + LT ++ V P
Sbjct: 10 FIRALEKSGALGVYVPLEGGFEGRYQRRLRANGYTPYNLTARGLGDLSSYLTGIHGVRPP 69
Query: 133 HVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 185
H+GK+ I + ++ PP Y+L LPP +KGLV+WIIE +LS++E+++L LP
Sbjct: 70 HLGKKNIGQDAAVGPVYFVPPIATYQLETLPPKSKGLVLWIIEGMILSRAEIEYLTYLPQ 129
Query: 186 LRPKVRVIAECGNWRKFMWKPLKE 209
P+++++ E G R F W+PL++
Sbjct: 130 QEPRLKIVVEMGGERYFRWQPLEQ 153
>sp|B0CA85|NDHN_ACAM1 NAD(P)H-quinone oxidoreductase subunit N OS=Acaryochloris marina
(strain MBIC 11017) GN=ndhN PE=3 SV=1
Length = 151
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 88/139 (63%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ +E+ A+ IY P EGG+EGRY RLR GY L +SA G+GD + T V+ V P
Sbjct: 9 KFIRTIEQSGAVGIYVPSEGGFEGRYKRRLRATGYLTLFVSAPGMGDLASYFTDVHGVRP 68
Query: 132 AHVGKQPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVR 191
H+GK I ++ PP V Y+L LPP AKGL +W+ + K L+K EL +L+ + P+++
Sbjct: 69 PHLGKNQIRTYFLPPFVTYQLENLPPQAKGLALWLYDGKRLAKQELAYLSAITASEPRLK 128
Query: 192 VIAECGNWRKFMWKPLKEI 210
V+ E G R F W+PL +I
Sbjct: 129 VVVELGGARSFEWQPLSDI 147
>sp|B0JY52|NDHN_MICAN NAD(P)H-quinone oxidoreductase subunit N OS=Microcystis aeruginosa
(strain NIES-843) GN=ndhN PE=3 SV=1
Length = 158
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 7/144 (4%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPA 132
++ D+E++ A+ +Y P EGGYEGRY RLR GY L ++ARGLGD LT ++ V P
Sbjct: 10 FIRDLEQYGALGVYAPLEGGYEGRYQRRLRATGYNVLHITARGLGDLSAYLTGIHGVRPP 69
Query: 133 HVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 185
H+GK+ I R ++ PP Y+L LPP +KGLV+WIIE+ VLS E Q+L L
Sbjct: 70 HLGKKNIGREAAVGPVYFIPPIATYQLENLPPKSKGLVIWIIESFVLSSEEKQYLINLSQ 129
Query: 186 LRPKVRVIAECGNWRKFMWKPLKE 209
P+++ + E G R F W+PL +
Sbjct: 130 QEPRLKFVLELGGERYFRWQPLSK 153
>sp|B1WYX9|NDHN_CYAA5 NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain
ATCC 51142) GN=ndhN PE=3 SV=1
Length = 158
Score = 127 bits (319), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 7/145 (4%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPA 132
++ +EK A+ +Y P EGG+EGRY RLR GY L L+ARGLGD L V+ V P
Sbjct: 10 FVRALEKSGALGVYAPLEGGFEGRYQRRLRTNGYDSLSLTARGLGDVSAYLMGVHGVRPP 69
Query: 133 HVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 185
H+GK+ I + ++ PP Y+L +L P +KGLV+WI+E +LSK+EL++L LP
Sbjct: 70 HLGKKNIGQGAAVGPIYFVPPIAAYQLESLSPQSKGLVLWILEGYILSKAELEYLVSLPQ 129
Query: 186 LRPKVRVIAECGNWRKFMWKPLKEI 210
P+++V+ E G R F W+PL+ +
Sbjct: 130 QEPRIKVVVELGGERYFRWEPLENL 154
>sp|B1XK97|NDHN_SYNP2 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhN PE=3 SV=1
Length = 157
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 93/146 (63%), Gaps = 8/146 (5%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPA 132
++ VEK A+A+Y P EGG+EGRY+ RLR GY ++L+ARGLGD LT+ + + P
Sbjct: 10 FIRTVEKSGAVAVYAPLEGGFEGRYVRRLRCSGYSVVNLTARGLGDVAAYLTQYHGIRPP 69
Query: 133 HVGKQPIA--------RWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 184
H+GK+ IA R+Y P Y+L LP +KG+++WIIE VLS+ E ++L L
Sbjct: 70 HLGKKDIAGSGAAVGLRYYVPGIASYQLENLPQKSKGIILWIIEGFVLSRQEQEYLVSLT 129
Query: 185 TLRPKVRVIAECGNWRKFMWKPLKEI 210
P+++V+ E G R+F +KPL ++
Sbjct: 130 QDNPQIKVVVEMGGDRQFSFKPLADL 155
>sp|Q8DJU2|NDHN_THEEB NAD(P)H-quinone oxidoreductase subunit N OS=Thermosynechococcus
elongatus (strain BP-1) GN=ndhN PE=1 SV=1
Length = 150
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 88/138 (63%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
+++ D+E A+A++ P EGG+EGRY RLR GY L +SA GLGD LT+ + + P
Sbjct: 8 QFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRP 67
Query: 132 AHVGKQPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVR 191
AH GK+ I ++ PP V Y L LPP+AKGLV+W+I+ K LSK E +LA L PK +
Sbjct: 68 AHTGKEDIRVYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFK 127
Query: 192 VIAECGNWRKFMWKPLKE 209
V+ E G R W+PL +
Sbjct: 128 VVVEVGGDRVVRWEPLAD 145
>sp|Q7NEV8|NDHN_GLOVI NAD(P)H-quinone oxidoreductase subunit N OS=Gloeobacter violaceus
(strain PCC 7421) GN=ndhN PE=3 SV=1
Length = 159
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 94/154 (61%)
Query: 64 DLLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTL 123
+L+ + R+++DVEKH +IA++ P EGG EG Y RLR +GY ++A+GLGD L
Sbjct: 5 NLVLDNGSRFVADVEKHSSIALWAPPEGGIEGNYQRRLRGIGYRTQIITAKGLGDISRFL 64
Query: 124 TKVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALL 183
+ + V PAH+GK+ + PPE+ + LP SAKG V+WIIE KVLS EL+ L L
Sbjct: 65 LESHGVRPAHLGKKDKRVFTLPPELAIYMDTLPASAKGFVLWIIEGKVLSLFELESLVGL 124
Query: 184 PTLRPKVRVIAECGNWRKFMWKPLKEIAGLTQEG 217
P PK++VI E G+ W PL++ EG
Sbjct: 125 PAAVPKLKVIVEVGSDYNIRWMPLEQAVSKMAEG 158
>sp|P74069|NDHN_SYNY3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ndhN PE=1 SV=1
Length = 161
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 90/142 (63%), Gaps = 7/142 (4%)
Query: 73 WLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPA 132
++ +E A+A+Y P EGGYEGRY RLR GY + LSARGLGD E L +V+ V PA
Sbjct: 13 FIRALENDGALAVYAPLEGGYEGRYQRRLRANGYASISLSARGLGDVEAYLMQVHGVRPA 72
Query: 133 HVGKQPIAR-------WYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPT 185
H+GK+ IA+ ++ P Y+L LP +KGLV+WI+E +LS++E+Q L L
Sbjct: 73 HLGKKNIAQEGAVGPIYFAQPIAGYQLENLPAQSKGLVLWILEGYILSQTEIQDLISLTK 132
Query: 186 LRPKVRVIAECGNWRKFMWKPL 207
PK++V+ E G R F W+PL
Sbjct: 133 RVPKLKVVLEMGGDRVFRWQPL 154
>sp|Q2JIJ7|NDHN_SYNJB NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ndhN PE=3 SV=1
Length = 147
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 82/144 (56%)
Query: 65 LLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLT 124
LL +++ +E+ A+AIY EGG EG YL RLR GY + LS++G+GD + LT
Sbjct: 2 LLVGSGAKFVQQLEQAGALAIYVTPEGGSEGHYLRRLRGAGYEVVTLSSKGIGDLASYLT 61
Query: 125 KVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 184
+++ V PA +GK ++FP ++ A LPP AKGLV W E V S+ EL +L L
Sbjct: 62 RIHGVRPATLGKSERRTYFFPALIEQYRATLPPKAKGLVFWFYEGHVFSQQELSYLVKLS 121
Query: 185 TLRPKVRVIAECGNWRKFMWKPLK 208
V+ + E G R W+PL+
Sbjct: 122 REDKGVKFVVELGRERSIRWQPLQ 145
>sp|Q2JVL1|NDHN_SYNJA NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain JA-3-3Ab) GN=ndhN PE=3 SV=1
Length = 147
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 81/144 (56%)
Query: 65 LLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLT 124
LL +++ +E+ A+AI+ EGG EG YL RLR GY + LS++G+GD + LT
Sbjct: 2 LLVGSGAKFVQQLEQCGALAIFVTPEGGSEGHYLRRLRGAGYEVVTLSSKGIGDLASYLT 61
Query: 125 KVYPVCPAHVGKQPIARWYFPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLP 184
+ V PA +GK +++P ++ A LPP AKGLV W E VLS+ EL +L L
Sbjct: 62 SSHGVRPATLGKSQRRTYFYPSLIEQYRATLPPKAKGLVFWFYEGHVLSRQELSYLVKLS 121
Query: 185 TLRPKVRVIAECGNWRKFMWKPLK 208
V+ + E G R W+PL+
Sbjct: 122 QEDKGVKFVVELGRERSIRWQPLQ 145
>sp|A2BYT7|NDHN_PROM5 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9515) GN=ndhN PE=3 SV=1
Length = 156
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++K+K +A++ P EGGYE R L R+R G+ SARGLGDPE L ++ + P
Sbjct: 9 KFHNDLKKNKCLAMFAPLEGGYETRLLRRMRAKGFKTYITSARGLGDPEVFLLNLHGIRP 68
Query: 132 AHVGKQPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 187
H+G Q I R EV + + K ++W++E +VLS+SEL+ L LPT
Sbjct: 69 PHLGHQSIGRNGALGEVQQVIPQASELFNENDKDKLLWLLEGQVLSQSELENLIKLPTAD 128
Query: 188 PKVRVIAECGNWRKFMWKPLKE 209
K++++ E G RK WK L +
Sbjct: 129 NKLKIVVEMGGSRKLEWKSLND 150
>sp|Q7U4K1|NDHN_SYNPX NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain WH8102) GN=ndhN PE=3 SV=1
Length = 153
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
D+E H +A++ P EGG E R L RLR GY SARGLGDPE LT+ + + P H+G
Sbjct: 13 DLEAHGCLAVHAPLEGGAETRLLRRLRGAGYRTRLWSARGLGDPEVFLTQKHGIRPPHLG 72
Query: 136 KQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 192
Q + R EV +L L + +W++E +VLS+SEL+ L L + P++R+
Sbjct: 73 HQSVGRGAAVGEVQEVVPQLGDLLDGDAQVALWLLEGQVLSQSELRSLCDLCSREPRLRI 132
Query: 193 IAECGNWRKFMWKPLK 208
I E G R W+P+
Sbjct: 133 IVEMGGARSLRWQPMS 148
>sp|A2C500|NDHN_PROM1 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain NATL1A) GN=ndhN PE=3 SV=1
Length = 154
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+E +AI +P EGG E R L RLR GY SARGLGDP LT+++ + P
Sbjct: 9 KFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQITSARGLGDPVVFLTQLHGIRP 68
Query: 132 AHVGKQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRP 188
H+G Q + R EV +L L K LV+W++E +VLSKSEL ++ L P
Sbjct: 69 PHLGHQNVGRNGALGEVQQVIPQLNELLVEDKPLVLWLLEGQVLSKSELLAISNLCQKEP 128
Query: 189 KVRVIAECGNWRKFMWKPLKE 209
+++++ E G R W+PL E
Sbjct: 129 RIKIVIEMGGARSIKWQPLNE 149
>sp|A8G763|NDHN_PROM2 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9215) GN=ndhN PE=3 SV=1
Length = 158
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
Query: 132 AHVGKQPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 187
H+G Q + R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTND 128
Query: 188 PKVRVIAECGNWRKFMWKPL 207
K+ ++ E G RK WKPL
Sbjct: 129 NKLTIVVEMGGSRKLEWKPL 148
>sp|A2BTD8|NDHN_PROMS NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain AS9601) GN=ndhN PE=3 SV=1
Length = 158
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
Query: 132 AHVGKQPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 187
H+G Q + R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTND 128
Query: 188 PKVRVIAECGNWRKFMWKPL 207
K+ ++ E G RK WKPL
Sbjct: 129 NKLTIVVEMGGSRKLEWKPL 148
>sp|Q318I3|NDHN_PROM9 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9312) GN=ndhN PE=3 SV=1
Length = 158
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 QFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
Query: 132 AHVGKQPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 187
H+G Q + R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTND 128
Query: 188 PKVRVIAECGNWRKFMWKPL 207
K+ ++ E G RK WKPL
Sbjct: 129 NKLSIVVEMGGSRKLEWKPL 148
>sp|Q46IQ8|NDHN_PROMT NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain NATL2A) GN=ndhN PE=3 SV=1
Length = 154
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+E +AI +P EGG E R L RLR GY SARGLGDP LT+++ + P
Sbjct: 9 KFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQVTSARGLGDPVVFLTQLHGIRP 68
Query: 132 AHVGKQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRP 188
H+G Q + R EV +L L K LV+W++E +VLSKSEL + L P
Sbjct: 69 PHLGHQNVGRNGALGEVQQVIPQLNELLVEDKPLVLWLLEGQVLSKSELLAINNLCQKEP 128
Query: 189 KVRVIAECGNWRKFMWKPLKE 209
+++++ E G R W+PL E
Sbjct: 129 RIKIVIEMGGARSIKWQPLNE 149
>sp|Q7UZU6|NDHN_PROMP NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=ndhN PE=3
SV=1
Length = 156
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D+ K+K +A++ P EGGYE R L R+R G+ SARGLGDPE L K++ + P
Sbjct: 9 KFHNDLNKNKCLAMFAPLEGGYETRLLRRMRAKGFKTYITSARGLGDPEVFLLKLHGIRP 68
Query: 132 AHVGKQPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 187
H+G Q I R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSIGRNGALGEVQQVIPQASELFNENDKDKLLWLLEGQVLSQSELESLIKICTSD 128
Query: 188 PKVRVIAECGNWRKFMWKPLKE 209
K++++ E G RK WK L +
Sbjct: 129 NKLKIVVEMGGSRKLEWKSLND 150
>sp|Q0ID04|NDHN_SYNS3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9311) GN=ndhN PE=3 SV=1
Length = 153
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
++E +A++ P EGG E R L RLR GY SARGLGDPE L + + + P H+G
Sbjct: 13 ELESAGCMAVFAPLEGGAETRLLRRLRGAGYRTQLSSARGLGDPEVFLFQKHGIRPPHLG 72
Query: 136 KQPIARWYFPPEVDYRLAALPPSAKG---LVVWIIEAKVLSKSELQFLALLPTLRPKVRV 192
Q + R EV + L S G +V+W++E +VLS+SEL L L P+++V
Sbjct: 73 HQSVGRGAAVGEVQEVMPLLGESMLGTKPVVLWLLEGQVLSRSELSALCDLCRREPRLKV 132
Query: 193 IAECGNWRKFMWKPLKEI 210
+ E G R W+PLKE+
Sbjct: 133 VVEMGGARSLRWQPLKEL 150
>sp|Q3AUW5|NDHN_SYNS9 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9902) GN=ndhN PE=3 SV=1
Length = 157
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
D+E + +A++ P EGG E R L RLR GY SARGLGDPE LT+ + + P H+G
Sbjct: 17 DLEANGCLAVHAPLEGGAETRLLRRLRGAGYRTRMTSARGLGDPEVFLTQKHGIRPPHLG 76
Query: 136 KQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 192
+ R EV + L + +WI+E +VLS+SEL L L P++R+
Sbjct: 77 HNCVGRGAAVGEVQQVVPLIGDLLDGDDSVALWILEGQVLSRSELLSLCDLCKREPRLRI 136
Query: 193 IAECGNWRKFMWKPLKEIAG 212
I E G R W+P+K + G
Sbjct: 137 IVEMGGARSLRWQPMKALLG 156
>sp|A3PF48|NDHN_PROM0 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9301) GN=ndhN PE=3 SV=1
Length = 158
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ +D++ +K +AI+ P EGGYE R L R+R G+ SARGLGDPE L K++ V P
Sbjct: 9 KFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRP 68
Query: 132 AHVGKQPIARWYFPPEVDYRL----AALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLR 187
H+G Q + R EV + + K ++W++E +VLS+SEL+ L + T
Sbjct: 69 PHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTKD 128
Query: 188 PKVRVIAECGNWRKFMWKPL 207
K+ ++ E G RK WK L
Sbjct: 129 NKLTIVVEMGGSRKLEWKSL 148
>sp|Q3AMM9|NDHN_SYNSC NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain CC9605) GN=ndhN PE=3 SV=1
Length = 153
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
D+E + +A+ P EGG E R L RLR GY SARGLGDPE LT+ + + P H+G
Sbjct: 13 DLEANGCLAVQAPLEGGAETRLLRRLRGAGYSTRMTSARGLGDPEVFLTQKHGIRPPHLG 72
Query: 136 KQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 192
Q + R EV +L L S + +W++E +VLS+SEL L L P++R+
Sbjct: 73 HQSVGRGAAVGEVQEVAPQLGDLFESDAPVALWLLEGQVLSRSELLSLCDLCKREPRLRI 132
Query: 193 IAECGNWRKFMWKPL 207
I E G R W+P+
Sbjct: 133 IVEMGGARSLKWEPM 147
>sp|A5GVV9|NDHN_SYNR3 NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain RCC307) GN=ndhN PE=3 SV=1
Length = 153
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
D+E+ +A+A+Y P EGG E R L RLR GY SARGLGDPE L ++ V P H+G
Sbjct: 13 DLERERALAVYAPLEGGAETRLLRRLRAAGYRTELTSARGLGDPEAFLLGLHGVRPPHLG 72
Query: 136 KQPIARWYFPPEVDYRLAALPP---SAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 192
+ R EV + L P S +V+W++E +VLS +E L L P++ +
Sbjct: 73 HHCVGRDAAVGEVQLVMPQLGPALASGAPVVLWMLEGQVLSSAEQASLLALCEREPRLHM 132
Query: 193 IAECGNWRKFMWKPLK 208
+ E G R WKPL+
Sbjct: 133 VLELGGSRSLRWKPLR 148
>sp|Q7V543|NDHN_PROMM NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9313) GN=ndhN PE=3 SV=1
Length = 153
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
D++ +A++ P EGG E R L RLR GY SARGLGDPE L +++ + P H+G
Sbjct: 13 DLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFELHGIRPPHLG 72
Query: 136 KQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 192
Q + R EV +LA L +V+W++E +VLS+SEL L L ++RV
Sbjct: 73 HQSVGRNGAVGEVQQVMPQLAELFVDNAPVVLWLLEGQVLSRSELLALCDLCKRESRLRV 132
Query: 193 IAECGNWRKFMWKPLKEIAG 212
+ E G R W+P+ + G
Sbjct: 133 VVEMGGARSLNWQPMSTLLG 152
>sp|A2CC26|NDHN_PROM3 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9303) GN=ndhN PE=3 SV=1
Length = 153
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
D++ +A++ P EGG E R L RLR GY SARGLGDPE L +++ + P H+G
Sbjct: 13 DLDACGCLAMHVPLEGGSETRLLRRLRAAGYRTQLSSARGLGDPEVFLFQLHGIRPPHLG 72
Query: 136 KQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVRV 192
Q + R EV +LA L +V+W++E +VLS+SEL L L ++RV
Sbjct: 73 HQSVGRNGAVGEVQQVMPQLAELFVDNVPVVLWLLEGQVLSRSELLALCDLCKRESRLRV 132
Query: 193 IAECGNWRKFMWKPLKEIAGL 213
+ E G R W+P+ + G+
Sbjct: 133 VVEMGGARSLNWQPMSTLLGV 153
>sp|A9BCP8|NDHN_PROM4 NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain MIT 9211) GN=ndhN PE=3 SV=1
Length = 153
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 75 SDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHV 134
D+E +AI TP EGG E R L RL+ GY S RG GDPE L K++ + P H+
Sbjct: 12 DDLESACCLAIQTPLEGGAETRLLRRLKAAGYRTQITSVRGFGDPEVFLLKLHGIRPPHL 71
Query: 135 GKQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRPKVR 191
G Q I R EV +L L + L +W++E +VLS+SEL L L P+++
Sbjct: 72 GHQNIGRNGALGEVQEVIPQLHELLSEEQPLALWLLEGQVLSRSELLALCDLSEKDPQLK 131
Query: 192 VIAECGNWRKFMWKPLKEI 210
++ E G RK W+ +++
Sbjct: 132 IVVEMGGERKLKWQSMRKF 150
>sp|A5GIU6|NDHN_SYNPW NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp.
(strain WH7803) GN=ndhN PE=3 SV=1
Length = 153
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
++E +A++ P EGG E R L RLR GY SARGLGDPE L + + V P H+G
Sbjct: 13 ELESAGCMAVHAPLEGGAETRLLRRLRAAGYRTHLTSARGLGDPEVFLFQKHGVRPPHLG 72
Query: 136 KQPIARWYFPPEVDYRLAALPPSAKG---LVVWIIEAKVLSKSELQFLALLPTLRPKVRV 192
Q + R EV + L G +V+W++E +VLS+SEL L L P++++
Sbjct: 73 HQSVGRGAAVGEVHDVMPLLGEVFLGDKPVVLWLLEGQVLSRSELLSLCDLCRREPRLKI 132
Query: 193 IAECGNWRKFMWKPLKEI 210
+ E G R W+P+ ++
Sbjct: 133 VVEMGGARSLRWQPMTQL 150
>sp|Q7V9W1|NDHN_PROMA NAD(P)H-quinone oxidoreductase subunit N OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=ndhN PE=3 SV=1
Length = 152
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 72 RWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCP 131
++ D+E +AI P EGG E R L RL+ GY S RGLGDPE L K++ + P
Sbjct: 9 KFRHDLEASGCLAINVPLEGGAETRLLRRLKAAGYKTQITSVRGLGDPEAFLLKLHGIRP 68
Query: 132 AHVGKQPIARWYFPPEVDY---RLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRP 188
H+G Q + R EV ++ L K +V+W++E +VLS+SE+ L L P
Sbjct: 69 PHLGHQNVGRNGALGEVQQVIPQVNELLAGEKSVVLWLLEGQVLSRSEILSLCDLCDKEP 128
Query: 189 KVRVIAECGNWRKFMWKPLK 208
+++++ E G R W+ ++
Sbjct: 129 RLKIVIEMGGARALRWQSMR 148
>sp|B1X509|NDHN_PAUCH NAD(P)H-quinone oxidoreductase subunit N, organellar chromatophore
OS=Paulinella chromatophora GN=ndhN PE=3 SV=1
Length = 158
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
Query: 76 DVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGLGDPETTLTKVYPVCPAHVG 135
D+E+ A+A++ P EGG E R + RLR +GY SA+GLGDPE L K++ H+G
Sbjct: 13 DLERDGALALFVPLEGGAETRLMRRLRAVGYKAYLTSAKGLGDPEAYLLKLHEQHVPHLG 72
Query: 136 K------QPIARWY-FPPEVDYRLAALPPSAKGLVVWIIEAKVLSKSELQFLALLPTLRP 188
+ +P + P+V L L +++W++E +VLS SEL ++ LP P
Sbjct: 73 RRMSTEGKPEGKSVGHVPKVMPMLGPLLEGKSPILLWLLEGQVLSSSELSAISNLPKREP 132
Query: 189 KVRVIAECGNWRKFMWKPLKEIA 211
+++++ E G R W+ L ++
Sbjct: 133 RLKIVVEMGGARALRWESLGKLV 155
>sp|P27909|POLG_DEN1B Genome polyprotein OS=Dengue virus type 1 (strain Brazil/97-11/1997)
PE=1 SV=2
Length = 3392
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 16 KIQQKQQPTRNWMMMQGLRRRNGKASKRVGVTNCSGNSGIEI---------GDFIGGDLL 66
K+ + Q+P +N +M + RR+ + S +VG + + +E+ G F +L
Sbjct: 3068 KVVRVQRPAKNGTVMDVISRRDQRGSGQVGTYGLNTFTNMEVQLIRQMESEGIFFPSELE 3127
Query: 67 KPDLGRWLSD-VEKHKA 82
P+L + D +EKH A
Sbjct: 3128 SPNLAERVLDWLEKHGA 3144
>sp|Q929A9|ADDA_LISIN ATP-dependent helicase/nuclease subunit A OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=addA PE=3 SV=1
Length = 1235
Score = 30.8 bits (68), Expect = 6.7, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 60 FIGGDLLKPDLGRWLSDVEKHKAIAIYTPHEGGYEGRYLNRLRYLGYYFLDLSARGL 116
F+ DL K W+ +V+ HK + + +P++ E R++ Y + D A G+
Sbjct: 960 FLTDDLEKEKSDNWMENVKAHKQVPVKSPYKDEIE-------RFMHYQYKDEEATGI 1009
>sp|Q8SS49|RL22_ENCCU 60S ribosomal protein L22 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL22 PE=1 SV=1
Length = 112
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 28 MMMQGLRRRNGKASKRVGVTNCSGNSGIEI---GDFIGGDLLKPDLGRWLSDVEKHKAIA 84
+ Q ++ GK K + + N +GN +E+ G FIG LK +GR+L + I
Sbjct: 33 FLQQKIKCYTGKKEKLLHI-NANGNI-VEVDVTGGFIGKQGLKWQIGRFLHMKKLRAFIK 90
Query: 85 IYTPHEGGYEGRYLN 99
I+ G+E RY+N
Sbjct: 91 IFAQGLDGFELRYIN 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,673,733
Number of Sequences: 539616
Number of extensions: 3738076
Number of successful extensions: 6429
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6360
Number of HSP's gapped (non-prelim): 41
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)