Query 027725
Match_columns 219
No_of_seqs 263 out of 1887
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 00:25:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027725.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027725hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 1.9E-49 6.5E-54 327.3 21.9 196 22-218 1-201 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 7.4E-30 2.5E-34 232.8 14.1 144 66-213 297-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 7.7E-29 2.6E-33 227.6 16.4 152 58-213 323-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 3.8E-29 1.3E-33 228.0 13.7 147 64-214 295-444 (465)
5 2e9q_A 11S globulin subunit be 100.0 1.6E-28 5.6E-33 224.3 14.1 146 65-214 295-443 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 5.1E-28 1.7E-32 222.3 13.2 153 58-214 359-515 (531)
7 1uij_A Beta subunit of beta co 99.9 3E-27 1E-31 214.1 14.4 155 54-214 212-384 (416)
8 2cav_A Protein (canavalin); vi 99.9 3.3E-27 1.1E-31 215.2 14.0 155 54-214 244-413 (445)
9 1fxz_A Glycinin G1; proglycini 99.9 1.3E-26 4.4E-31 212.8 17.4 146 65-214 311-459 (476)
10 3c3v_A Arachin ARAH3 isoform; 99.9 9.8E-27 3.3E-31 214.4 16.1 147 65-215 345-494 (510)
11 2d5f_A Glycinin A3B4 subunit; 99.9 1.2E-26 4.1E-31 213.6 13.7 146 64-214 339-485 (493)
12 2ea7_A 7S globulin-1; beta bar 99.9 1.5E-26 5.2E-31 210.4 13.9 156 53-214 228-400 (434)
13 3s7i_A Allergen ARA H 1, clone 99.9 2.5E-26 8.6E-31 207.7 12.1 154 55-214 226-409 (418)
14 1dgw_A Canavalin; duplicated s 99.9 9.9E-25 3.4E-29 176.4 13.5 149 56-212 3-166 (178)
15 2phl_A Phaseolin; plant SEED s 99.9 1E-23 3.5E-28 189.5 13.5 133 71-214 224-372 (397)
16 2vqa_A SLL1358 protein, MNCA; 99.9 1.2E-22 4E-27 179.8 16.2 160 49-215 194-353 (361)
17 2e9q_A 11S globulin subunit be 99.9 4E-23 1.4E-27 188.8 12.7 136 76-215 47-237 (459)
18 2cav_A Protein (canavalin); vi 99.9 5.3E-22 1.8E-26 180.9 14.9 136 72-212 63-211 (445)
19 1fxz_A Glycinin G1; proglycini 99.9 2.2E-22 7.5E-27 184.7 11.9 139 72-215 29-229 (476)
20 1uij_A Beta subunit of beta co 99.9 3.3E-22 1.1E-26 181.0 12.7 138 71-213 25-176 (416)
21 2ea7_A 7S globulin-1; beta bar 99.9 6.7E-22 2.3E-26 179.8 14.6 138 71-213 37-188 (434)
22 3ksc_A LEGA class, prolegumin; 99.9 3.6E-22 1.2E-26 183.4 12.5 132 76-211 30-214 (496)
23 3qac_A 11S globulin SEED stora 99.9 4.4E-22 1.5E-26 181.5 12.5 138 71-213 30-237 (465)
24 2phl_A Phaseolin; plant SEED s 99.9 1.1E-21 3.9E-26 176.2 13.0 137 70-211 27-181 (397)
25 2d5f_A Glycinin A3B4 subunit; 99.9 2.8E-21 9.6E-26 177.9 12.6 138 73-215 27-232 (493)
26 3s7i_A Allergen ARA H 1, clone 99.8 8.1E-21 2.8E-25 171.7 13.7 134 72-212 21-169 (418)
27 3c3v_A Arachin ARAH3 isoform; 99.8 7.5E-21 2.6E-25 175.2 12.2 137 72-213 29-269 (510)
28 3kgl_A Cruciferin; 11S SEED gl 99.8 1.6E-20 5.5E-25 171.3 12.1 138 71-213 23-245 (466)
29 2vqa_A SLL1358 protein, MNCA; 99.8 1.5E-19 5.1E-24 159.8 16.6 149 57-213 21-172 (361)
30 3fz3_A Prunin; TREE NUT allerg 99.8 2.7E-20 9.3E-25 171.1 11.1 138 71-213 28-297 (531)
31 1j58_A YVRK protein; cupin, de 99.8 1.3E-18 4.6E-23 155.1 16.6 155 53-215 222-376 (385)
32 1j58_A YVRK protein; cupin, de 99.8 3.6E-18 1.2E-22 152.3 13.0 147 57-212 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.7 4.7E-18 1.6E-22 119.8 4.5 75 59-134 4-78 (79)
34 3h8u_A Uncharacterized conserv 99.6 2.1E-14 7.3E-19 108.0 11.0 83 91-178 38-121 (125)
35 3ibm_A Cupin 2, conserved barr 99.5 4.4E-13 1.5E-17 106.8 14.7 118 49-173 11-132 (167)
36 3l2h_A Putative sugar phosphat 99.5 1.3E-13 4.4E-18 108.6 10.8 83 91-178 45-129 (162)
37 2fqp_A Hypothetical protein BP 99.5 1.3E-13 4.5E-18 99.7 8.8 76 91-169 17-92 (97)
38 2xlg_A SLL1785 protein, CUCA; 99.5 1.2E-13 4.2E-18 116.2 9.7 81 90-170 41-137 (239)
39 1v70_A Probable antibiotics sy 99.5 2.8E-13 9.6E-18 97.5 10.0 78 90-172 26-103 (105)
40 1lr5_A Auxin binding protein 1 99.5 3.4E-13 1.2E-17 106.3 10.6 83 91-174 40-127 (163)
41 2oa2_A BH2720 protein; 1017534 99.5 8.3E-13 2.9E-17 102.7 12.5 83 91-173 42-125 (148)
42 3es1_A Cupin 2, conserved barr 99.5 3.1E-13 1E-17 108.4 9.9 81 90-176 77-157 (172)
43 3i7d_A Sugar phosphate isomera 99.4 5.5E-13 1.9E-17 105.7 10.0 83 91-178 42-127 (163)
44 2gu9_A Tetracenomycin polyketi 99.4 1.4E-12 4.7E-17 95.4 10.8 78 91-173 20-99 (113)
45 1x82_A Glucose-6-phosphate iso 99.4 2.4E-12 8.3E-17 104.5 13.3 83 91-173 66-156 (190)
46 3ht1_A REMF protein; cupin fol 99.4 1.6E-12 5.5E-17 99.5 11.1 81 91-177 38-120 (145)
47 4e2g_A Cupin 2 conserved barre 99.4 7.8E-13 2.7E-17 99.3 8.6 79 91-176 40-118 (126)
48 3kgz_A Cupin 2 conserved barre 99.4 1.8E-12 6.3E-17 102.2 10.7 79 90-174 42-120 (156)
49 2bnm_A Epoxidase; oxidoreducta 99.4 4E-12 1.4E-16 102.8 11.9 81 88-170 113-197 (198)
50 3lag_A Uncharacterized protein 99.4 2.5E-13 8.6E-18 99.1 4.1 77 91-169 16-92 (98)
51 3fjs_A Uncharacterized protein 99.4 1.4E-12 4.6E-17 97.3 8.2 73 91-169 35-107 (114)
52 3jzv_A Uncharacterized protein 99.4 2.6E-12 8.9E-17 102.4 10.2 78 90-173 51-128 (166)
53 2b8m_A Hypothetical protein MJ 99.4 4.2E-12 1.4E-16 94.3 10.2 75 91-171 26-101 (117)
54 1o4t_A Putative oxalate decarb 99.4 3.4E-12 1.2E-16 97.5 9.8 76 90-170 55-130 (133)
55 2pfw_A Cupin 2, conserved barr 99.4 3.9E-12 1.3E-16 94.0 9.8 78 91-176 33-110 (116)
56 4i4a_A Similar to unknown prot 99.3 1.1E-11 3.7E-16 93.3 11.2 76 90-171 32-107 (128)
57 2f4p_A Hypothetical protein TM 99.3 1.4E-11 4.9E-16 95.8 11.8 97 90-199 46-143 (147)
58 2vpv_A Protein MIF2, MIF2P; nu 99.3 4.9E-12 1.7E-16 100.8 9.3 74 92-170 88-162 (166)
59 1vj2_A Novel manganese-contain 99.3 4.4E-12 1.5E-16 95.9 8.1 78 89-172 45-122 (126)
60 3cew_A Uncharacterized cupin p 99.3 7.2E-12 2.5E-16 94.2 8.8 79 90-173 24-103 (125)
61 2o8q_A Hypothetical protein; c 99.3 9E-12 3.1E-16 94.7 9.1 77 93-174 44-120 (134)
62 1yhf_A Hypothetical protein SP 99.3 2.2E-11 7.5E-16 89.8 10.2 73 91-171 39-111 (115)
63 1y9q_A Transcriptional regulat 99.3 1.4E-11 4.7E-16 99.4 9.8 77 89-172 101-179 (192)
64 2ozi_A Hypothetical protein RP 99.3 6.7E-12 2.3E-16 91.6 6.4 78 91-170 16-93 (98)
65 1rc6_A Hypothetical protein YL 99.3 1.4E-11 4.7E-16 104.4 9.2 78 89-171 176-254 (261)
66 3h7j_A Bacilysin biosynthesis 99.3 1.7E-11 5.7E-16 102.9 9.0 81 92-178 145-226 (243)
67 2ozj_A Cupin 2, conserved barr 99.2 8.6E-11 2.9E-15 86.7 10.4 71 92-170 38-108 (114)
68 1sef_A Conserved hypothetical 99.2 1.4E-10 4.9E-15 98.9 12.8 76 90-171 180-257 (274)
69 2q30_A Uncharacterized protein 99.2 6.4E-11 2.2E-15 86.2 9.1 75 91-171 32-107 (110)
70 1y3t_A Hypothetical protein YX 99.2 9.5E-11 3.3E-15 101.8 9.8 78 91-174 45-122 (337)
71 4e2q_A Ureidoglycine aminohydr 99.2 1.7E-10 5.8E-15 98.4 11.0 109 49-175 37-146 (266)
72 1juh_A Quercetin 2,3-dioxygena 99.2 2.3E-10 7.9E-15 101.1 12.0 82 91-174 47-131 (350)
73 3lwc_A Uncharacterized protein 99.2 1.3E-10 4.4E-15 87.5 8.8 74 91-172 39-112 (119)
74 1sq4_A GLXB, glyoxylate-induce 99.2 1E-10 3.5E-15 100.3 9.1 76 90-171 66-143 (278)
75 1sfn_A Conserved hypothetical 99.1 4.9E-10 1.7E-14 94.3 12.6 77 89-171 162-239 (246)
76 1rc6_A Hypothetical protein YL 99.1 1.4E-10 4.6E-15 98.3 9.0 77 91-172 58-135 (261)
77 2opk_A Hypothetical protein; p 99.1 3.4E-10 1.2E-14 84.0 9.5 75 91-171 30-109 (112)
78 3h7j_A Bacilysin biosynthesis 99.1 1.8E-10 6.3E-15 96.5 8.6 73 93-171 35-108 (243)
79 2d40_A Z3393, putative gentisa 99.1 1.1E-10 3.9E-15 103.3 7.2 77 90-171 98-174 (354)
80 2pyt_A Ethanolamine utilizatio 99.1 2.2E-10 7.5E-15 88.0 7.8 72 91-172 56-127 (133)
81 1y3t_A Hypothetical protein YX 99.1 5.9E-10 2E-14 96.7 11.2 75 94-174 219-294 (337)
82 2d40_A Z3393, putative gentisa 99.1 7.6E-10 2.6E-14 98.0 12.0 90 72-171 249-339 (354)
83 1sef_A Conserved hypothetical 99.1 2.8E-10 9.5E-15 97.1 8.8 78 90-172 60-138 (274)
84 2i45_A Hypothetical protein; n 99.1 2.6E-10 8.8E-15 83.3 7.0 69 94-169 30-98 (107)
85 3rns_A Cupin 2 conserved barre 99.1 5.6E-10 1.9E-14 92.7 9.7 73 91-170 152-224 (227)
86 3d82_A Cupin 2, conserved barr 99.0 1E-09 3.5E-14 78.7 8.9 59 103-168 40-98 (102)
87 4h7l_A Uncharacterized protein 99.0 7.5E-10 2.6E-14 87.2 8.6 71 92-173 47-119 (157)
88 1sq4_A GLXB, glyoxylate-induce 99.0 1.9E-09 6.5E-14 92.3 10.9 79 88-172 187-266 (278)
89 3rns_A Cupin 2 conserved barre 99.0 1.7E-09 5.7E-14 89.8 10.1 74 91-172 36-109 (227)
90 3nw4_A Gentisate 1,2-dioxygena 99.0 6.4E-10 2.2E-14 98.8 7.8 76 90-171 101-177 (368)
91 3bu7_A Gentisate 1,2-dioxygena 99.0 4.7E-09 1.6E-13 94.1 13.4 75 91-171 293-368 (394)
92 4e2q_A Ureidoglycine aminohydr 99.0 3.2E-09 1.1E-13 90.5 11.7 76 89-170 183-259 (266)
93 3bu7_A Gentisate 1,2-dioxygena 99.0 1.7E-09 5.9E-14 96.9 10.1 78 89-171 120-198 (394)
94 4axo_A EUTQ, ethanolamine util 99.0 1.7E-09 5.9E-14 84.8 8.3 72 91-172 65-136 (151)
95 4b29_A Dimethylsulfoniopropion 99.0 2.2E-09 7.7E-14 88.4 9.1 77 90-172 130-206 (217)
96 1vr3_A Acireductone dioxygenas 98.9 1.2E-08 4E-13 82.9 12.9 84 93-178 75-168 (191)
97 1o5u_A Novel thermotoga mariti 98.9 5E-09 1.7E-13 76.6 6.8 63 96-165 35-97 (101)
98 1sfn_A Conserved hypothetical 98.8 8.9E-09 3.1E-13 86.5 9.1 72 91-172 49-120 (246)
99 3bcw_A Uncharacterized protein 98.8 1.1E-08 3.8E-13 77.4 6.6 67 91-163 48-114 (123)
100 1dgw_Y Canavalin; duplicated s 98.8 4.7E-08 1.6E-12 70.4 9.3 74 136-214 6-83 (93)
101 2q1z_B Anti-sigma factor CHRR, 98.8 2.4E-08 8.3E-13 81.2 8.5 70 92-171 125-194 (195)
102 3ebr_A Uncharacterized RMLC-li 98.7 5.2E-08 1.8E-12 76.9 9.2 75 91-173 41-117 (159)
103 3eqe_A Putative cystein deoxyg 98.7 2.6E-07 8.8E-12 73.8 13.0 85 91-175 68-156 (171)
104 1juh_A Quercetin 2,3-dioxygena 98.7 1.5E-07 5.1E-12 83.0 11.0 76 91-172 248-326 (350)
105 1zrr_A E-2/E-2' protein; nicke 98.6 1.8E-08 6.1E-13 81.1 4.6 70 105-177 93-162 (179)
106 2o1q_A Putative acetyl/propion 98.6 1.9E-08 6.4E-13 78.1 4.5 77 92-174 44-121 (145)
107 1yfu_A 3-hydroxyanthranilate-3 98.6 3.4E-07 1.1E-11 72.8 10.6 61 98-160 41-101 (174)
108 2y0o_A Probable D-lyxose ketol 98.6 1.2E-07 4.2E-12 75.8 8.0 81 92-174 53-155 (175)
109 3cjx_A Protein of unknown func 98.6 9.8E-08 3.3E-12 75.8 6.5 74 91-171 42-117 (165)
110 3nw4_A Gentisate 1,2-dioxygena 98.5 5.5E-07 1.9E-11 79.9 10.1 88 73-170 260-349 (368)
111 3st7_A Capsular polysaccharide 98.5 4.9E-07 1.7E-11 79.0 9.7 84 93-178 273-365 (369)
112 3bal_A Acetylacetone-cleaving 98.5 2.5E-07 8.5E-12 72.5 6.7 109 50-171 12-120 (153)
113 2gm6_A Cysteine dioxygenase ty 98.5 2E-06 6.7E-11 70.7 12.4 82 91-173 78-168 (208)
114 3d0j_A Uncharacterized protein 98.4 3.6E-07 1.2E-11 70.1 6.7 69 101-171 38-109 (140)
115 2arc_A ARAC, arabinose operon 98.4 2.8E-06 9.7E-11 65.2 10.9 58 106-169 32-90 (164)
116 3eln_A Cysteine dioxygenase ty 98.4 6.5E-06 2.2E-10 67.2 12.8 86 91-176 69-163 (200)
117 3o14_A Anti-ecfsigma factor, C 98.4 1.6E-06 5.4E-11 72.0 9.2 74 91-176 42-115 (223)
118 1zvf_A 3-hydroxyanthranilate 3 98.4 2.9E-06 9.9E-11 67.4 10.0 59 99-159 41-103 (176)
119 2qnk_A 3-hydroxyanthranilate 3 98.2 4.2E-06 1.5E-10 71.1 8.7 67 100-170 39-105 (286)
120 3uss_A Putative uncharacterize 98.0 0.00012 4E-09 60.2 13.2 84 91-175 72-164 (211)
121 3myx_A Uncharacterized protein 98.0 4.2E-05 1.4E-09 64.0 10.4 77 91-176 46-123 (238)
122 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.8 0.00011 3.7E-09 56.7 9.1 74 97-172 40-114 (141)
123 3ejk_A DTDP sugar isomerase; Y 97.8 0.00027 9.3E-09 56.3 11.1 76 97-172 58-142 (174)
124 3es4_A Uncharacterized protein 97.6 0.00018 6E-09 53.7 6.9 63 93-161 43-105 (116)
125 1yud_A Hypothetical protein SO 97.3 0.0044 1.5E-07 49.0 12.5 131 71-211 27-165 (170)
126 3myx_A Uncharacterized protein 97.3 0.0011 3.9E-08 55.2 9.5 63 91-159 166-228 (238)
127 3gbg_A TCP pilus virulence reg 97.2 0.0015 5E-08 54.5 9.1 74 91-168 6-83 (276)
128 3o14_A Anti-ecfsigma factor, C 97.1 0.00064 2.2E-08 56.2 6.0 64 93-168 147-210 (223)
129 2vec_A YHAK, pirin-like protei 96.9 0.0045 1.5E-07 52.1 9.5 73 94-170 66-141 (256)
130 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0067 2.3E-07 48.6 10.0 69 100-169 56-134 (185)
131 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.9 0.0035 1.2E-07 50.8 8.4 76 100-177 68-150 (197)
132 3kmh_A D-lyxose isomerase; cup 96.9 0.0021 7.3E-08 53.3 7.1 76 93-168 107-205 (246)
133 2ixk_A DTDP-4-dehydrorhamnose 96.9 0.0083 2.8E-07 48.0 10.1 69 100-169 57-135 (184)
134 3ryk_A DTDP-4-dehydrorhamnose 96.8 0.0079 2.7E-07 49.0 9.2 68 100-168 78-156 (205)
135 1wlt_A 176AA long hypothetical 96.7 0.014 4.9E-07 47.1 10.4 69 99-168 72-151 (196)
136 3bb6_A Uncharacterized protein 96.7 0.013 4.3E-07 44.1 9.2 66 100-166 22-94 (127)
137 1vrb_A Putative asparaginyl hy 96.7 0.011 3.8E-07 51.6 10.4 73 97-170 145-252 (342)
138 1dzr_A DTDP-4-dehydrorhamnose 96.5 0.022 7.4E-07 45.5 10.2 68 100-168 55-133 (183)
139 1tq5_A Protein YHHW; bicupin, 96.5 0.016 5.3E-07 48.3 9.6 73 94-170 43-118 (242)
140 1oi6_A PCZA361.16; epimerase, 96.5 0.026 8.8E-07 45.9 10.6 68 100-168 55-133 (205)
141 2c0z_A NOVW; isomerase, epimer 96.4 0.024 8.2E-07 46.5 10.2 68 100-168 63-141 (216)
142 1upi_A DTDP-4-dehydrorhamnose 96.4 0.036 1.2E-06 45.7 11.1 68 100-168 74-152 (225)
143 4gjz_A Lysine-specific demethy 96.3 0.0082 2.8E-07 48.4 6.7 65 96-161 127-226 (235)
144 4hn1_A Putative 3-epimerase in 96.3 0.048 1.6E-06 44.2 11.1 77 100-176 52-139 (201)
145 2qdr_A Uncharacterized protein 96.1 0.019 6.7E-07 48.2 8.0 77 89-175 88-165 (303)
146 3d8c_A Hypoxia-inducible facto 95.8 0.032 1.1E-06 48.8 8.7 73 97-170 187-296 (349)
147 2xdv_A MYC-induced nuclear ant 95.6 0.048 1.7E-06 49.3 8.9 62 98-160 144-223 (442)
148 1eyb_A Homogentisate 1,2-dioxy 95.5 0.15 5.2E-06 46.1 11.9 67 107-180 172-242 (471)
149 4diq_A Lysine-specific demethy 95.4 0.19 6.5E-06 45.9 12.1 72 97-169 168-261 (489)
150 2qnk_A 3-hydroxyanthranilate 3 95.1 0.071 2.4E-06 45.2 7.7 54 99-159 214-267 (286)
151 3al5_A HTYW5, JMJC domain-cont 94.9 0.065 2.2E-06 46.5 7.3 70 97-169 171-271 (338)
152 2p17_A Pirin-like protein; GK1 94.5 0.24 8.3E-06 41.9 9.9 69 98-170 45-115 (277)
153 3rcq_A Aspartyl/asparaginyl be 94.4 0.11 3.9E-06 41.8 7.2 83 80-167 89-177 (197)
154 1e5r_A Proline oxidase; oxidor 94.1 0.044 1.5E-06 46.8 4.4 73 92-168 91-173 (290)
155 3k2o_A Bifunctional arginine d 93.5 0.24 8.3E-06 43.0 8.1 76 97-172 176-292 (336)
156 3kv5_D JMJC domain-containing 93.5 0.17 6E-06 46.2 7.4 62 100-161 274-361 (488)
157 2qjv_A Uncharacterized IOLB-li 93.5 0.3 1E-05 41.2 8.4 83 89-173 150-248 (270)
158 1j1l_A Pirin; beta sandwich, c 93.1 0.53 1.8E-05 40.1 9.4 72 94-170 42-117 (290)
159 2oyz_A UPF0345 protein VPA0057 93.0 0.6 2.1E-05 33.1 8.0 66 97-170 28-93 (94)
160 2yu1_A JMJC domain-containing 92.9 0.29 1E-05 44.3 7.8 76 99-174 203-304 (451)
161 3kv4_A PHD finger protein 8; e 92.9 0.35 1.2E-05 43.7 8.3 75 100-174 239-339 (447)
162 3k3o_A PHF8, PHD finger protei 92.5 0.29 9.9E-06 43.2 7.2 63 99-161 154-242 (371)
163 1pmi_A PMI, phosphomannose iso 92.2 0.64 2.2E-05 41.9 9.1 76 91-170 356-437 (440)
164 3hqx_A UPF0345 protein aciad03 92.0 0.79 2.7E-05 33.4 7.7 68 97-170 42-109 (111)
165 3kv9_A JMJC domain-containing 91.8 0.41 1.4E-05 42.6 7.3 73 100-174 183-283 (397)
166 1xru_A 4-deoxy-L-threo-5-hexos 91.3 1.2 4.1E-05 37.7 9.3 81 91-174 179-266 (282)
167 3loi_A Putative uncharacterize 91.3 4.4 0.00015 31.8 12.2 106 93-211 54-168 (172)
168 3pua_A GRC5, PHD finger protei 91.2 0.57 1.9E-05 41.6 7.4 64 98-161 180-269 (392)
169 3m3i_A Putative uncharacterize 91.0 4.3 0.00015 33.1 12.0 109 93-211 61-210 (225)
170 3dl3_A Tellurite resistance pr 90.9 1.2 4.2E-05 32.8 7.9 61 104-166 28-92 (119)
171 2wfp_A Mannose-6-phosphate iso 89.7 0.48 1.6E-05 42.0 5.8 57 91-155 323-379 (394)
172 1qwr_A Mannose-6-phosphate iso 89.5 0.69 2.4E-05 39.8 6.4 57 91-155 250-306 (319)
173 3pur_A Lysine-specific demethy 89.1 0.68 2.3E-05 42.6 6.4 64 98-161 302-391 (528)
174 2rg4_A Uncharacterized protein 88.8 1.2 4.1E-05 36.0 7.2 64 93-158 104-191 (216)
175 1ywk_A 4-deoxy-L-threo-5-hexos 88.4 2 7E-05 36.4 8.4 81 91-174 179-266 (289)
176 1tq5_A Protein YHHW; bicupin, 88.1 4.6 0.00016 33.2 10.4 69 90-169 158-226 (242)
177 3eo6_A Protein of unknown func 87.9 1.6 5.6E-05 31.5 6.4 55 98-158 42-96 (106)
178 1zx5_A Mannosephosphate isomer 85.5 2.6 9.1E-05 35.8 7.7 57 91-157 229-286 (300)
179 2pqq_A Putative transcriptiona 83.2 2.9 0.0001 29.9 6.2 52 94-146 28-80 (149)
180 2vec_A YHAK, pirin-like protei 83.0 5.9 0.0002 32.9 8.6 72 90-168 180-251 (256)
181 3mdp_A Cyclic nucleotide-bindi 82.6 2.2 7.5E-05 30.4 5.2 53 94-147 29-85 (142)
182 2p17_A Pirin-like protein; GK1 81.6 7 0.00024 32.7 8.6 71 90-169 165-240 (277)
183 1j1l_A Pirin; beta sandwich, c 81.4 7.5 0.00026 32.8 8.8 77 89-170 166-242 (290)
184 3gyd_A CNMP-BD protein, cyclic 80.9 6.3 0.00021 30.0 7.6 52 94-146 62-114 (187)
185 3dn7_A Cyclic nucleotide bindi 80.8 5.6 0.00019 30.1 7.3 52 95-147 31-83 (194)
186 2ypd_A Probable JMJC domain-co 80.4 1.7 6E-05 38.3 4.5 40 136-175 293-332 (392)
187 2oz6_A Virulence factor regula 80.4 6.4 0.00022 30.0 7.6 52 95-147 14-66 (207)
188 3idb_B CAMP-dependent protein 80.0 6 0.00021 29.0 7.1 51 94-146 61-112 (161)
189 4ev0_A Transcription regulator 79.1 5.4 0.00018 30.6 6.8 117 95-214 23-187 (216)
190 3fx3_A Cyclic nucleotide-bindi 79.0 6.2 0.00021 30.9 7.2 51 95-146 35-86 (237)
191 3ryp_A Catabolite gene activat 79.0 7 0.00024 29.8 7.4 117 95-214 20-191 (210)
192 3e97_A Transcriptional regulat 78.8 6.4 0.00022 30.7 7.2 53 94-147 29-82 (231)
193 1znp_A Hypothetical protein AT 78.6 20 0.00069 27.4 11.6 89 71-160 20-115 (154)
194 3iwz_A CAP-like, catabolite ac 77.6 6.6 0.00022 30.5 6.9 52 95-147 35-87 (230)
195 2qjv_A Uncharacterized IOLB-li 77.3 14 0.0005 30.8 9.1 70 92-169 29-108 (270)
196 3d0s_A Transcriptional regulat 77.2 7.5 0.00026 30.2 7.1 116 96-214 31-201 (227)
197 1zx5_A Mannosephosphate isomer 76.1 2 6.7E-05 36.6 3.6 45 113-157 117-179 (300)
198 1zyb_A Transcription regulator 76.1 5.4 0.00018 31.4 6.0 118 94-214 43-210 (232)
199 3b02_A Transcriptional regulat 76.0 6.4 0.00022 29.9 6.3 50 98-148 3-53 (195)
200 3kcc_A Catabolite gene activat 75.2 9.4 0.00032 30.7 7.4 53 94-147 69-122 (260)
201 2z69_A DNR protein; beta barre 75.2 2.8 9.5E-05 30.3 3.8 52 94-146 35-87 (154)
202 3g7d_A PHPD; non heme Fe(II) d 74.7 42 0.0014 29.2 11.8 77 76-157 320-397 (443)
203 2ptm_A Hyperpolarization-activ 74.4 6.5 0.00022 30.1 6.0 49 94-146 94-142 (198)
204 1qwr_A Mannose-6-phosphate iso 74.2 2.3 8E-05 36.4 3.6 45 113-157 117-179 (319)
205 3la7_A Global nitrogen regulat 74.1 8.7 0.0003 30.4 6.9 53 94-147 43-96 (243)
206 2fmy_A COOA, carbon monoxide o 73.9 12 0.00041 28.8 7.6 114 95-214 28-191 (220)
207 2bgc_A PRFA; bacterial infecti 73.5 7.4 0.00025 30.7 6.3 71 96-169 20-98 (238)
208 1o5l_A Transcriptional regulat 73.3 7.1 0.00024 30.2 6.0 52 94-146 22-74 (213)
209 2gau_A Transcriptional regulat 72.7 6 0.0002 30.9 5.5 118 94-214 33-204 (232)
210 1ft9_A Carbon monoxide oxidati 72.5 22 0.00075 27.4 8.8 115 94-214 23-187 (222)
211 3bpz_A Potassium/sodium hyperp 72.3 6.9 0.00023 30.1 5.7 48 94-146 95-142 (202)
212 3e6c_C CPRK, cyclic nucleotide 72.2 10 0.00036 30.0 6.9 118 94-214 32-201 (250)
213 4ava_A Lysine acetyltransferas 71.9 8.3 0.00028 32.0 6.5 52 94-146 36-87 (333)
214 2qcs_B CAMP-dependent protein 71.8 14 0.00047 29.8 7.7 52 94-146 180-233 (291)
215 2zcw_A TTHA1359, transcription 70.8 7.8 0.00027 29.6 5.7 115 96-214 7-170 (202)
216 3dv8_A Transcriptional regulat 70.3 9.3 0.00032 29.3 6.1 117 95-214 27-193 (220)
217 2wfp_A Mannose-6-phosphate iso 68.3 4.2 0.00014 35.9 3.9 23 135-157 239-261 (394)
218 4f8a_A Potassium voltage-gated 63.4 21 0.00073 25.5 6.6 50 94-148 50-99 (160)
219 2d93_A RAP guanine nucleotide 63.0 8.9 0.0003 27.1 4.3 48 94-146 39-87 (134)
220 1xsq_A Ureidoglycolate hydrola 61.9 14 0.0005 28.6 5.5 64 106-169 70-139 (168)
221 1xe7_A YML079WP, hypothetical 61.3 61 0.0021 25.9 13.1 109 93-212 80-199 (203)
222 3ocp_A PRKG1 protein; serine/t 61.2 21 0.0007 25.2 6.0 48 94-146 46-93 (139)
223 2xxz_A Lysine-specific demethy 60.4 8.9 0.0003 33.1 4.4 35 135-169 278-312 (332)
224 3tnp_B CAMP-dependent protein 60.4 26 0.0009 30.5 7.6 51 94-146 168-219 (416)
225 1o7f_A CAMP-dependent RAP1 gua 59.6 17 0.00058 31.7 6.3 54 94-148 65-121 (469)
226 2bdr_A Ureidoglycolate hydrola 58.9 17 0.0006 28.3 5.5 64 106-169 72-141 (175)
227 3pna_A CAMP-dependent protein 58.9 27 0.00092 25.1 6.4 48 94-146 61-108 (154)
228 1pmi_A PMI, phosphomannose iso 57.6 8.5 0.00029 34.5 3.9 23 136-158 266-288 (440)
229 3shr_A CGMP-dependent protein 53.9 26 0.00089 28.3 6.1 52 94-146 180-233 (299)
230 1vp6_A CNBD, cyclic-nucleotide 53.2 13 0.00043 26.1 3.6 45 95-146 35-79 (138)
231 2qdr_A Uncharacterized protein 52.0 38 0.0013 28.4 6.6 66 91-174 216-289 (303)
232 1ywk_A 4-deoxy-L-threo-5-hexos 50.9 52 0.0018 27.7 7.5 66 97-168 62-131 (289)
233 3of1_A CAMP-dependent protein 50.1 29 0.00099 26.8 5.6 49 94-146 148-196 (246)
234 3dkw_A DNR protein; CRP-FNR, H 49.9 5.4 0.00018 30.9 1.2 52 95-147 33-85 (227)
235 3ukn_A Novel protein similar t 49.0 22 0.00075 27.2 4.7 49 94-147 98-146 (212)
236 2qcs_B CAMP-dependent protein 46.2 44 0.0015 26.7 6.3 48 94-146 62-109 (291)
237 4ask_A Lysine-specific demethy 45.8 20 0.00068 32.7 4.4 35 135-169 312-346 (510)
238 3avr_A Lysine-specific demethy 45.1 30 0.001 31.8 5.5 35 135-169 337-371 (531)
239 1xru_A 4-deoxy-L-threo-5-hexos 42.9 34 0.0012 28.8 5.1 52 113-169 78-132 (282)
240 3of1_A CAMP-dependent protein 40.5 29 0.001 26.8 4.2 47 95-146 31-77 (246)
241 3tnp_B CAMP-dependent protein 37.0 56 0.0019 28.3 5.9 52 94-146 290-348 (416)
242 1yll_A PA5104, conserved hypot 36.4 35 0.0012 27.1 4.0 36 113-152 140-175 (200)
243 4din_B CAMP-dependent protein 36.1 52 0.0018 28.1 5.4 49 97-146 274-324 (381)
244 3shr_A CGMP-dependent protein 35.5 50 0.0017 26.5 5.0 49 94-147 62-110 (299)
245 4f7z_A RAP guanine nucleotide 34.7 78 0.0027 30.7 7.0 53 93-146 64-119 (999)
246 1wgp_A Probable cyclic nucleot 33.7 6.6 0.00023 27.7 -0.7 48 97-146 32-82 (137)
247 3g7d_A PHPD; non heme Fe(II) d 31.9 2.3E+02 0.0077 24.7 8.4 72 137-210 156-263 (443)
248 1o7f_A CAMP-dependent RAP1 gua 29.3 1.3E+02 0.0045 25.8 7.0 46 97-146 364-409 (469)
249 1tc3_C Protein (TC3 transposas 28.1 79 0.0027 17.3 4.0 27 190-216 21-47 (51)
250 1s4c_A Protein HI0227; double- 28.0 1.1E+02 0.0039 22.6 5.5 54 105-158 60-134 (155)
251 1eyb_A Homogentisate 1,2-dioxy 27.2 64 0.0022 29.1 4.4 51 96-155 347-398 (471)
252 1wy3_A Villin; structural prot 25.5 47 0.0016 18.8 2.2 21 191-211 1-21 (35)
253 2dkz_A Hypothetical protein LO 24.4 51 0.0017 22.5 2.5 29 182-213 47-75 (84)
254 4din_B CAMP-dependent protein 24.3 57 0.002 27.8 3.6 48 94-146 153-200 (381)
255 1pcq_O Groes protein; chaperon 23.9 1.8E+02 0.0061 20.2 5.5 21 131-151 50-70 (97)
256 1und_A Advillin, P92; actin bi 23.6 53 0.0018 18.8 2.2 21 191-211 3-23 (37)
257 2lcj_A PAB POLC intein; hydrol 23.6 98 0.0033 23.6 4.5 47 93-151 75-122 (185)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=1.9e-49 Score=327.33 Aligned_cols=196 Identities=48% Similarity=0.798 Sum_probs=185.5
Q ss_pred cCCCCCcceeeccCCCC-ccccCccccCCCCcCcccccccc-cCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEE
Q 027725 22 VDPDTLQDVCVADTSSG-VKVNGFACKDSANITADDFFFAG-LAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDY 99 (219)
Q Consensus 22 ~d~~~~~d~cv~~~~~~-~~~~g~~ck~p~~~~~~df~~~~-~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l 99 (219)
+||||||||||||++++ +++|||||| |+.++++||+|++ +.+++++.+..|+.++.++..++|++++.++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 69999999999999998 999999999 9999999999998 88888878899999999999999999999999999999
Q ss_pred cCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC---CeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCc
Q 027725 100 EAGGLNPPHTHPRATEMIFVLEGELDVGFISTA---DKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPG 176 (219)
Q Consensus 100 ~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~---~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg 176 (219)
+||++.++|||++++|++||++|++++++.+.+ ++.+.+.|++||+++||+|.+|+++|.|++++++++++++++|+
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 999999999999889999999999999998654 67668899999999999999999999999999999999999999
Q ss_pred cchhchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcCCCC
Q 027725 177 TQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLAPKK 218 (219)
Q Consensus 177 ~~~~~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~~ 218 (219)
.+.++.++|+.+|++++++|+++|+++++++++|+++|+++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~~ 201 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS 201 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTCC
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCCC
Confidence 999999999987789999999999999999999999998763
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.96 E-value=7.4e-30 Score=232.79 Aligned_cols=144 Identities=16% Similarity=0.282 Sum_probs=133.6
Q ss_pred CcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eEEEEEEcCCC
Q 027725 66 GVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KLISKTVKKGE 144 (219)
Q Consensus 66 ~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~~~~~L~~GD 144 (219)
++..++.|+.++.+++.+||+|++++++++++++.||++.+||||++|+||+||++|+++++++++++ +++..+|++||
T Consensus 297 ~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GD 376 (466)
T 3kgl_A 297 ADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQ 376 (466)
T ss_dssp EEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTC
T ss_pred CCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCc
Confidence 34456788899999999999999999999999999999999999999999999999999999999865 67889999999
Q ss_pred EEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027725 145 IYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIA--ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 213 (219)
Q Consensus 145 v~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~ 213 (219)
+++||+|++|++ |.|++++.+++++++++|+...++ .++|+ .+|++||+++|+++.+++++|+++
T Consensus 377 V~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~---~lP~eVla~aF~v~~~~v~~Lk~~ 443 (466)
T 3kgl_A 377 LLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLR---GLPLEVISNGYQISLEEARRVKFN 443 (466)
T ss_dssp EEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGG---GSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhh---hCCHHHHHHHhCcCHHHHHHHHhc
Confidence 999999999998 789999999999999999998887 47777 699999999999999999999985
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.96 E-value=7.7e-29 Score=227.56 Aligned_cols=152 Identities=15% Similarity=0.232 Sum_probs=135.3
Q ss_pred cccccC-CCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eE
Q 027725 58 FFAGLA-KPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KL 135 (219)
Q Consensus 58 ~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~ 135 (219)
.++... ..+++.++.|+.++.+++.+||+|+++|+++++++|.||++.+||||++|+||+||++|+++++++++++ ++
T Consensus 323 ~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~ 402 (496)
T 3ksc_A 323 RLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTV 402 (496)
T ss_dssp EEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEE
T ss_pred hccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEE
Confidence 444432 3344556788999999999999999999999999999999999999999999999999999999999764 67
Q ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027725 136 ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIA--ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 213 (219)
Q Consensus 136 ~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~ 213 (219)
+..+|++||+++||+|++|++.| +++++.+++++++++|+...++ .++|+ .+|++||+++|+++.+++++|++.
T Consensus 403 f~~~l~~GDV~v~P~G~~H~~~a-~~e~~~~l~f~~s~np~~~~LaG~~sv~~---~~p~eVLa~aF~v~~~~v~~Lk~~ 478 (496)
T 3ksc_A 403 FDGELEAGRALTVPQNYAVAAKS-LSDRFSYVAFKTNDRAGIARLAGTSSVIN---NLPLDVVAATFNLQRNEARQLKSN 478 (496)
T ss_dssp EEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSTTCCEEESSSTTCTTT---TSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEEecCCeEEEECCCCEEEEEe-CCCCEEEEEEECCCCCccccccchhhhhh---hCCHHHHHHHHCcCHHHHHHHHhc
Confidence 78899999999999999999877 4788999999999999988886 46776 699999999999999999999984
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.96 E-value=3.8e-29 Score=228.04 Aligned_cols=147 Identities=16% Similarity=0.246 Sum_probs=135.0
Q ss_pred CCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eEEEEEEcC
Q 027725 64 KPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KLISKTVKK 142 (219)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~~~~~L~~ 142 (219)
..+++.++.|+.++.+++.+||+|+++|++++++++.||++.+|||||+|+|++||++|+++++++++++ +++..+|++
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~ 374 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSR 374 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecC
Confidence 3455667889999999999999999999999999999999999999999999999999999999999864 678889999
Q ss_pred CCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027725 143 GEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIA--ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKL 214 (219)
Q Consensus 143 GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 214 (219)
||+++||+|++|++. .|++++.+++++++++|+...++ .++|+ .+|++||+++|+++.+++++|+++-
T Consensus 375 GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~---~ip~eVla~aF~v~~e~v~~Lk~~~ 444 (465)
T 3qac_A 375 GQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIR---SLPIDVVSNIYQISREEAFGLKFNR 444 (465)
T ss_dssp TCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHH---HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhh---hCCHHHHHHHhCCCHHHHHHHHhcc
Confidence 999999999999985 57889999999999999999887 57777 6999999999999999999999863
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.96 E-value=1.6e-28 Score=224.35 Aligned_cols=146 Identities=18% Similarity=0.304 Sum_probs=134.3
Q ss_pred CCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eEEEEEEcCC
Q 027725 65 PGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KLISKTVKKG 143 (219)
Q Consensus 65 ~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~~~~~L~~G 143 (219)
.+++.++.|+.++.+++.+||+|++++++++++++.||++.+||||++++|++||++|++++++++++| +++..+|++|
T Consensus 295 ~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~G 374 (459)
T 2e9q_A 295 RADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREG 374 (459)
T ss_dssp CCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCC
Confidence 344556789999999999999999999999999999999999999999999999999999999998764 6667789999
Q ss_pred CEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027725 144 EIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIA--ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKL 214 (219)
Q Consensus 144 Dv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 214 (219)
|+++||+|++|++.| |++++.+++++++++|+...++ .++|+ .+|++||+++|+++++++++|+++.
T Consensus 375 Dv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~---~~p~~Vla~af~v~~~~v~~l~~~~ 443 (459)
T 2e9q_A 375 QVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMR---MLPLGVLSNMYRISREEAQRLKYGQ 443 (459)
T ss_dssp CEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHH---HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred cEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHH---hCCHHHHHHHHCcCHHHHHHHHhcC
Confidence 999999999999999 7889999999999999999987 67777 5999999999999999999999864
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.95 E-value=5.1e-28 Score=222.32 Aligned_cols=153 Identities=17% Similarity=0.309 Sum_probs=133.7
Q ss_pred cccccC-CCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eE
Q 027725 58 FFAGLA-KPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KL 135 (219)
Q Consensus 58 ~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~ 135 (219)
.|+... ..+++.++.|+.++.+++.+||+|+++++++++++|.||++.+||||++++|++||++|++++++++++| ++
T Consensus 359 ~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v 438 (531)
T 3fz3_A 359 KENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAI 438 (531)
T ss_dssp EEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEE
T ss_pred eeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEE
Confidence 455442 3344667889999999999999999999999999999999999999999999999999999999999765 66
Q ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027725 136 ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIA--ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 213 (219)
Q Consensus 136 ~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~ 213 (219)
+..+|++||+++||+|++|+.. .+++.+.++++.++++|+...++ .++|+ .+|++||+++|+++++++++|+++
T Consensus 439 ~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~---~lP~eVLa~aF~v~~e~v~kLk~~ 514 (531)
T 3fz3_A 439 LDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLR---ALPDEVLANAYQISREQARQLKYN 514 (531)
T ss_dssp EEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHH---HSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHH---hCCHHHHHHHhCcCHHHHHHHHhc
Confidence 8899999999999999999865 56677777755566899988887 67787 599999999999999999999986
Q ss_pred c
Q 027725 214 L 214 (219)
Q Consensus 214 ~ 214 (219)
-
T Consensus 515 ~ 515 (531)
T 3fz3_A 515 R 515 (531)
T ss_dssp C
T ss_pred C
Confidence 3
No 7
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.95 E-value=3e-27 Score=214.11 Aligned_cols=155 Identities=18% Similarity=0.298 Sum_probs=136.5
Q ss_pred cccccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC
Q 027725 54 ADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD 133 (219)
Q Consensus 54 ~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~ 133 (219)
...+.|+....++...+..| .++.++..+||+|++++++++++++.||++.+||||++++|++||++|+++++++++++
T Consensus 212 ~~~~~~~l~~~~p~~~~~~G-~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g 290 (416)
T 1uij_A 212 SEDEPFNLRSRNPIYSNNFG-KFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKE 290 (416)
T ss_dssp CSSSCEETTSSCCSEECSSE-EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC-
T ss_pred CcccceeccccCCCccCCCc-eEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCC
Confidence 45677888777665555544 79999999999999999999999999999999999999999999999999999998866
Q ss_pred --------------eEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecC-CCCccchhc---hhhhcCCCCCCHHH
Q 027725 134 --------------KLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNS-QLPGTQSIA---ATLFTATPPVPDNV 195 (219)
Q Consensus 134 --------------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s-~~pg~~~~~---~~lf~~~~~~~~~v 195 (219)
+.+...|++||+++||+|++|++.|. +++.+++++++ ++|+.+.++ .++|+ .+|++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~---~~p~~v 365 (416)
T 1uij_A 291 QQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVR---QIERQV 365 (416)
T ss_dssp -----------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGG---GSCHHH
T ss_pred ccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHH---hCCHHH
Confidence 46677999999999999999999998 67999998865 489988886 57887 699999
Q ss_pred HHHHcCCCHHHHHHHHhhc
Q 027725 196 LTKAFQVGTKEIEKIKSKL 214 (219)
Q Consensus 196 l~~af~~~~~~v~~l~~~~ 214 (219)
|+++|+++++++++|++..
T Consensus 366 la~af~~~~~~v~~l~~~~ 384 (416)
T 1uij_A 366 QELAFPGSAQDVERLLKKQ 384 (416)
T ss_dssp HHHHSSSCHHHHHHHTTSC
T ss_pred HHHHHCcCHHHHHHHHhcC
Confidence 9999999999999998754
No 8
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.94 E-value=3.3e-27 Score=215.22 Aligned_cols=155 Identities=19% Similarity=0.269 Sum_probs=134.0
Q ss_pred cccccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC
Q 027725 54 ADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD 133 (219)
Q Consensus 54 ~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~ 133 (219)
...+.|+...+++..+ ..|+.++.++..+||+|+++|++++++++.||++.+||||++++|++||++|+++++++++++
T Consensus 244 ~~~~~~~l~~~~p~~~-~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~ 322 (445)
T 2cav_A 244 SQDKPFNLRSRDPIYS-NNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQ 322 (445)
T ss_dssp --CCCEETTSSCCSEE-SSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC--
T ss_pred CcccceeccccCCCcc-CCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCC
Confidence 3457788877766554 556689999999999999999999999999999999999999999999999999999998763
Q ss_pred ---------e--EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe-cCCCCccchhc---hhhhcCCCCCCHHHHHH
Q 027725 134 ---------K--LISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF-NSQLPGTQSIA---ATLFTATPPVPDNVLTK 198 (219)
Q Consensus 134 ---------~--~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~~~~~~~vl~~ 198 (219)
+ ++..+|++||+++||+|++|++.|. +++.++++. ++++|+.+.++ .++|+ .+|++||++
T Consensus 323 ~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~---~~p~~vla~ 397 (445)
T 2cav_A 323 QQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIR---QIPRQVSDL 397 (445)
T ss_dssp ---------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGG---GSCHHHHHH
T ss_pred cccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhh---hCCHHHHHH
Confidence 3 5889999999999999999999998 467777765 45588888887 57887 699999999
Q ss_pred HcCCCHHHHHHHHhhc
Q 027725 199 AFQVGTKEIEKIKSKL 214 (219)
Q Consensus 199 af~~~~~~v~~l~~~~ 214 (219)
+|++|.+++++|++..
T Consensus 398 af~v~~~~v~~l~~~~ 413 (445)
T 2cav_A 398 TFPGSGEEVEELLENQ 413 (445)
T ss_dssp HSSSCHHHHHHHHHHC
T ss_pred HHCcCHHHHHHHHhcC
Confidence 9999999999998754
No 9
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.94 E-value=1.3e-26 Score=212.76 Aligned_cols=146 Identities=18% Similarity=0.324 Sum_probs=133.9
Q ss_pred CCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eEEEEEEcCC
Q 027725 65 PGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KLISKTVKKG 143 (219)
Q Consensus 65 ~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~~~~~L~~G 143 (219)
.+++.++.|+.++.++..+||+|+++++++++++++||++.+||||++++|++||++|++++++++++| +.+..+|++|
T Consensus 311 ~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~G 390 (476)
T 1fxz_A 311 SPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEG 390 (476)
T ss_dssp CCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCC
Confidence 344557889999999999999999999999999999999999999999999999999999999998764 5667789999
Q ss_pred CEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027725 144 EIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIA--ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKL 214 (219)
Q Consensus 144 Dv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 214 (219)
|+++||+|.+|++.| |++++.+++++++.+|+...++ .++|+ .+|++||+++|+++++++++|++.+
T Consensus 391 Dv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~---~~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 391 RVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLN---ALPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp CEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGG---GSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHH---hCCHHHHHHHhCcCHHHHHHHHhhC
Confidence 999999999999999 8889999999988899988887 67888 5999999999999999999999875
No 10
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.94 E-value=9.8e-27 Score=214.39 Aligned_cols=147 Identities=16% Similarity=0.294 Sum_probs=134.6
Q ss_pred CCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eEEEEEEcCC
Q 027725 65 PGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KLISKTVKKG 143 (219)
Q Consensus 65 ~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~~~~~L~~G 143 (219)
.+++.++.|+.++.++..+||+|+++++++++++++||++.+||||++++|++||++|++++++++++| +++..+|++|
T Consensus 345 ~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~G 424 (510)
T 3c3v_A 345 SPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEG 424 (510)
T ss_dssp CCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETT
T ss_pred cCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCC
Confidence 344557889999999999999999999999999999999999999999999999999999999998764 6667789999
Q ss_pred CEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhc--hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 027725 144 EIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIA--ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLA 215 (219)
Q Consensus 144 Dv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~--~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~~ 215 (219)
|+++||+|.+|++.| +++++.+++++++.+|+...++ .++|+ .+|++||+++|+++.+++++|++.+.
T Consensus 425 Dv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~---~lp~eVla~aF~v~~e~v~~L~~~~~ 494 (510)
T 3c3v_A 425 HVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVID---NLPEEVVANSYGLPREQARQLKNNNP 494 (510)
T ss_dssp CEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTT---TSCHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred cEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHH---hCCHHHHHHHHCcCHHHHHHHHhhCC
Confidence 999999999999999 8888999999888899998887 67887 59999999999999999999998753
No 11
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.94 E-value=1.2e-26 Score=213.64 Aligned_cols=146 Identities=18% Similarity=0.368 Sum_probs=133.7
Q ss_pred CCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eEEEEEEcC
Q 027725 64 KPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KLISKTVKK 142 (219)
Q Consensus 64 ~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~~~~~L~~ 142 (219)
.++++.++.|+.++.++..+||+|+++++++++++++||++.+||||++++|++||++|++++++++++| +++..+|++
T Consensus 339 ~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~ 418 (493)
T 2d5f_A 339 SRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRR 418 (493)
T ss_dssp GGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEET
T ss_pred CCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcC
Confidence 4555667889999999999999999999999999999999999999999999999999999999998764 556678999
Q ss_pred CCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027725 143 GEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKL 214 (219)
Q Consensus 143 GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 214 (219)
||+++||+|.+|++.| +++++.+++++++++|+...+ .++|+ .+|++||+++|+++.+++++|+++.
T Consensus 419 GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~---~~p~eVla~aF~v~~~~v~~l~~~~ 485 (493)
T 2d5f_A 419 GQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFR---AIPSEVLSNSYNLGQSQVRQLKYQG 485 (493)
T ss_dssp TCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHH---HSCHHHHHHHHTCCHHHHHHHHHSS
T ss_pred CCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHH---hCCHHHHHHHHCcCHHHHHHHHhcC
Confidence 9999999999999998 558899999999999999888 77888 5999999999999999999999875
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.94 E-value=1.5e-26 Score=210.37 Aligned_cols=156 Identities=20% Similarity=0.275 Sum_probs=135.8
Q ss_pred CcccccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC
Q 027725 53 TADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA 132 (219)
Q Consensus 53 ~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~ 132 (219)
....+.|+....++... ..|+.++.++..+||+|++++++++++++.||++.+||||++++|++||++|++++++++++
T Consensus 228 ~~~~~~~~l~~~~p~~~-~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~ 306 (434)
T 2ea7_A 228 SSQDEPFNLRNSKPIYS-NKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLS 306 (434)
T ss_dssp TCSSSCEETTSSCCSEE-ETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEE
T ss_pred CCcccceeeccCCCcee-CCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecC
Confidence 34567788776666554 55668999999999999999999999999999999999999999999999999999999875
Q ss_pred C-------------eEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEec-CCCCccchhc---hhhhcCCCCCCHHH
Q 027725 133 D-------------KLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFN-SQLPGTQSIA---ATLFTATPPVPDNV 195 (219)
Q Consensus 133 ~-------------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~-s~~pg~~~~~---~~lf~~~~~~~~~v 195 (219)
+ +.+..+|++||+++||+|++|++.|. +++.+++++. +++++.+.++ .++|+ .+|++|
T Consensus 307 g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~---~~p~~v 381 (434)
T 2ea7_A 307 DQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMS---EIPTEV 381 (434)
T ss_dssp ECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGG---GSCHHH
T ss_pred ccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhh---hCCHHH
Confidence 3 26677999999999999999999998 5788888765 4578888887 57787 699999
Q ss_pred HHHHcCCCHHHHHHHHhhc
Q 027725 196 LTKAFQVGTKEIEKIKSKL 214 (219)
Q Consensus 196 l~~af~~~~~~v~~l~~~~ 214 (219)
|+++|+++.+++++|++..
T Consensus 382 la~af~v~~~~v~~l~~~~ 400 (434)
T 2ea7_A 382 LEVSFPASGKKVEKLIKKQ 400 (434)
T ss_dssp HHHHSSSCHHHHHHHHTTC
T ss_pred HHHHHCcCHHHHHHHHhcC
Confidence 9999999999999999853
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.93 E-value=2.5e-26 Score=207.72 Aligned_cols=154 Identities=15% Similarity=0.220 Sum_probs=133.4
Q ss_pred ccccccccCCCCcccCCCCcEEEEecccCC-CCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC
Q 027725 55 DDFFFAGLAKPGVVNNSVGSLVTAANVEKI-PGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD 133 (219)
Q Consensus 55 ~df~~~~~~~~~~~~~~~g~~~~~~~~~~~-P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~ 133 (219)
..+.|+....++..++.. +.++.++..+| |+|+++|++++++++.||++.+||||+++.|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~n~~-G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNNF-GKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEETT-EEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCCC-CeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 367888887777655444 46899999999 9999999999999999999999999999999999999999999997654
Q ss_pred -------------------------eEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe-cCCCCccchhch---hh
Q 027725 134 -------------------------KLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF-NSQLPGTQSIAA---TL 184 (219)
Q Consensus 134 -------------------------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~-~s~~pg~~~~~~---~l 184 (219)
+.+...|++||+++||+|++||+.|.+ ++.++++. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 466899999999999999999998854 47776654 456899888875 57
Q ss_pred hcCCCCCCHHHHHHHcCCCHHHHHHHHhhc
Q 027725 185 FTATPPVPDNVLTKAFQVGTKEIEKIKSKL 214 (219)
Q Consensus 185 f~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 214 (219)
|+ ++|+++|+++|+++.+++++|++.-
T Consensus 383 ~~---~~~~evla~af~v~~~~v~~L~~~q 409 (418)
T 3s7i_A 383 ID---QIEKQAKDLAFPGSGEQVEKLIKNQ 409 (418)
T ss_dssp HH---HSCHHHHHHHSSSCHHHHHHHHHTC
T ss_pred hh---cCCHHHHHHHhCCCHHHHHHHHhcC
Confidence 77 6999999999999999999999853
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.92 E-value=9.9e-25 Score=176.42 Aligned_cols=149 Identities=15% Similarity=0.221 Sum_probs=120.9
Q ss_pred cccccccCCCCcccCCCCcEEEEecc-----cCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEc
Q 027725 56 DFFFAGLAKPGVVNNSVGSLVTAANV-----EKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIS 130 (219)
Q Consensus 56 df~~~~~~~~~~~~~~~g~~~~~~~~-----~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~ 130 (219)
.|+|+........ ...|+.++.++. ..+|+++ ++++.+++++||++.+|| |++++|++||++|++++++++
T Consensus 3 p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 3 PYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp TTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred Cceechhhcccce-EcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 3666654433322 356777888777 6688877 579999999999999999 888999999999999999987
Q ss_pred cCCeEEEEEEcCCCEEEECCCCeEEEEeCCCC-CEEEEEEe-cCCCCccchh---c-----hhhhcCCCCCCHHHHHHHc
Q 027725 131 TADKLISKTVKKGEIYVFPKALVHFQKNNGDK-PASVISAF-NSQLPGTQSI---A-----ATLFTATPPVPDNVLTKAF 200 (219)
Q Consensus 131 ~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~-~a~~l~~~-~s~~pg~~~~---~-----~~lf~~~~~~~~~vl~~af 200 (219)
+++. ..+.|++||+++||+|.+|+++|.|++ +++++++. ++++|+.+.. + .++|+ ++|++||+++|
T Consensus 79 ~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~---~~p~~vla~af 154 (178)
T 1dgw_A 79 PDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFLEASY 154 (178)
T ss_dssp TTEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHHHHHH
T ss_pred CCCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh---hCCHHHHHHHH
Confidence 5543 378999999999999999999999986 78888875 5567874433 1 46777 69999999999
Q ss_pred CCCHHHHHHHHh
Q 027725 201 QVGTKEIEKIKS 212 (219)
Q Consensus 201 ~~~~~~v~~l~~ 212 (219)
+++++++++|+.
T Consensus 155 ~v~~~~~~~l~~ 166 (178)
T 1dgw_A 155 DSPYDEIEQTLL 166 (178)
T ss_dssp TSCHHHHHHHTT
T ss_pred CcCHHHHHHHhc
Confidence 999999999984
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.90 E-value=1e-23 Score=189.52 Aligned_cols=133 Identities=21% Similarity=0.265 Sum_probs=117.7
Q ss_pred CCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEcc------CC-eEEEEEEcCC
Q 027725 71 SVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST------AD-KLISKTVKKG 143 (219)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~------~~-~~~~~~L~~G 143 (219)
..++.++.++..+ ++++++++++.||++.+||||++++|+.||++|+++++++++ ++ +.+..+|++|
T Consensus 224 n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~G 297 (397)
T 2phl_A 224 NEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKD 297 (397)
T ss_dssp ETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETT
T ss_pred CCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCC
Confidence 4455688888877 789999999999999999999999999999999999999987 44 7889999999
Q ss_pred CEEEECCCCeEEEEeCCCCCEEEEEEecC-CCCccchhc---hhhhcCCCCCC-----HHHHHHHcCCCHHHHHHHHhhc
Q 027725 144 EIYVFPKALVHFQKNNGDKPASVISAFNS-QLPGTQSIA---ATLFTATPPVP-----DNVLTKAFQVGTKEIEKIKSKL 214 (219)
Q Consensus 144 Dv~~~P~g~~H~~~N~g~~~a~~l~~~~s-~~pg~~~~~---~~lf~~~~~~~-----~~vl~~af~~~~~~v~~l~~~~ 214 (219)
|+++||+|++|++.|.+ ++.++++..+ ++|+.+.++ .++|+ .+| ++||+++|+++++++++|+++.
T Consensus 298 DV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~---~~p~~~~~~eVla~af~v~~~~v~~l~~~~ 372 (397)
T 2phl_A 298 DVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVIS---SIGRALDGKDVLGLTFSGSGDEVMKLINKQ 372 (397)
T ss_dssp CEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHH---HHHTSTTHHHHHHHHSSSCHHHHHHHHTTC
T ss_pred CEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHh---hCCCccchHHHHHHHhCcCHHHHHHHHhcC
Confidence 99999999999999986 7888886654 489888777 67787 466 9999999999999999999865
No 16
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.89 E-value=1.2e-22 Score=179.81 Aligned_cols=160 Identities=22% Similarity=0.337 Sum_probs=138.8
Q ss_pred CCCcCcccccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEE
Q 027725 49 SANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGF 128 (219)
Q Consensus 49 p~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~ 128 (219)
+.....++|.|+.+..++ ..+..|+.++.+...++|++++ +++.++.++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~-~~~~~gg~~~~~~~~~~~~~~~--~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQP-LVSLGGNELRLASAKEFPGSFN--MTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCC-SEEETTEEEEEECTTTCTTSTT--CEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCC-cccCCCceEEEEehhhCcCccc--ceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 345567889888776665 3346788899999999998874 6788999999999999999977999999999999999
Q ss_pred EccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhchhhhcCCCCCCHHHHHHHcCCCHHHHH
Q 027725 129 ISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIE 208 (219)
Q Consensus 129 ~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~~~~~~~vl~~af~~~~~~v~ 208 (219)
.+++|+...+.|++||++++|+|..|++.|.|+++++++++++..+++...++.++ + .+|+++|+++|++++++++
T Consensus 271 ~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~~~~~vl~~~f~~~~~~~~ 346 (361)
T 2vqa_A 271 FASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLSTWL-A---SNPSSVLGNTFQISPELTK 346 (361)
T ss_dssp ECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHHHH-H---TSCHHHHHHHHTCCHHHHT
T ss_pred EcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHHHh-h---hCCHHHHHHHHCcCHHHHH
Confidence 87666656789999999999999999999999999999999999999988887754 5 6999999999999999999
Q ss_pred HHHhhcC
Q 027725 209 KIKSKLA 215 (219)
Q Consensus 209 ~l~~~~~ 215 (219)
+|+++..
T Consensus 347 ~l~~~~~ 353 (361)
T 2vqa_A 347 KLPVQDT 353 (361)
T ss_dssp TSCCSCC
T ss_pred hhhccCC
Confidence 9987654
No 17
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.89 E-value=4e-23 Score=188.78 Aligned_cols=136 Identities=21% Similarity=0.285 Sum_probs=116.6
Q ss_pred EEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-E-------------------
Q 027725 76 VTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-L------------------- 135 (219)
Q Consensus 76 ~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~------------------- 135 (219)
.+.++..+.|.|+++|++++|++++||++.+||||+ ++|++||++|++.++++.++++ .
T Consensus 47 ~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~ 125 (459)
T 2e9q_A 47 FTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQH 125 (459)
T ss_dssp EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEE
T ss_pred EEEecCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhcccccccccccc
Confidence 444566778999999999999999999999999997 9999999999999999976532 1
Q ss_pred -EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCC--------Cccchhc-------------------------
Q 027725 136 -ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQL--------PGTQSIA------------------------- 181 (219)
Q Consensus 136 -~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~--------pg~~~~~------------------------- 181 (219)
..+.|++||+++||+|++||++|.|++++++++++++.+ +..+.++
T Consensus 126 q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ 205 (459)
T 2e9q_A 126 QKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGSSGEK 205 (459)
T ss_dssp CCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC------------C
T ss_pred ceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccccccccc
Confidence 256899999999999999999999999999999998665 2233333
Q ss_pred -hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 027725 182 -ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLA 215 (219)
Q Consensus 182 -~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~~ 215 (219)
.++|+ ++++++|+++|+++.++++||+++..
T Consensus 206 ~~nif~---gf~~evLa~aF~v~~~~v~kL~~~~~ 237 (459)
T 2e9q_A 206 SGNIFS---GFADEFLEEAFQIDGGLVRKLKGEDD 237 (459)
T ss_dssp CCCTTT---TSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred ccchhh---cCCHHHHHhhcCCCHHHHHhhhhccc
Confidence 37887 79999999999999999999997664
No 18
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.88 E-value=5.3e-22 Score=180.90 Aligned_cols=136 Identities=15% Similarity=0.220 Sum_probs=115.6
Q ss_pred CCcEEEEecc--cCCCCCCccc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEE
Q 027725 72 VGSLVTAANV--EKIPGLNTLG-VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVF 148 (219)
Q Consensus 72 ~g~~~~~~~~--~~~P~l~~~g-is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~ 148 (219)
.++.++.++. .+.|.+++++ +++++++++||++.+|| |++++|++||++|++++++++++++ ..+.|++||++++
T Consensus 63 e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~ 140 (445)
T 2cav_A 63 QHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKI 140 (445)
T ss_dssp TTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEE
T ss_pred CCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEE
Confidence 4666776544 4557888877 99999999999999999 6679999999999999999976554 6899999999999
Q ss_pred CCCCeEEEEeCC-CCCEEEEEEec-CCCCccc---hhc-----hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 027725 149 PKALVHFQKNNG-DKPASVISAFN-SQLPGTQ---SIA-----ATLFTATPPVPDNVLTKAFQVGTKEIEKIKS 212 (219)
Q Consensus 149 P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~~---~~~-----~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~ 212 (219)
|+|..||++|.| +++++++++++ +++|+.+ .++ .++|+ ++|+++|+++|++|++++++|++
T Consensus 141 P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~---~~~~~vLa~af~v~~~~v~~l~~ 211 (445)
T 2cav_A 141 QAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFLEASYDSPYDEIEQTLL 211 (445)
T ss_dssp CTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHTT
T ss_pred CCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh---cCCHHHHHHHhCCCHHHHHhhhc
Confidence 999999999998 79999999887 5567633 233 25677 69999999999999999999985
No 19
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.87 E-value=2.2e-22 Score=184.70 Aligned_cols=139 Identities=18% Similarity=0.285 Sum_probs=116.4
Q ss_pred CCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE----------------
Q 027725 72 VGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL---------------- 135 (219)
Q Consensus 72 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~---------------- 135 (219)
.++.+. +...+.|+|+++|++++|++++||++.+||||+ ++|++||++|++.++++.++++.
T Consensus 29 e~G~~e-~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~ 106 (476)
T 1fxz_A 29 EGGLIE-TWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSR 106 (476)
T ss_dssp TTEEEE-ECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC---------------
T ss_pred CCceEE-eeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhccccccccccccc
Confidence 344444 455677999999999999999999999999998 99999999999999999865431
Q ss_pred ------EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCC--------ccchhc--------------------
Q 027725 136 ------ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLP--------GTQSIA-------------------- 181 (219)
Q Consensus 136 ------~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~-------------------- 181 (219)
..+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 107 ~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~ 186 (476)
T 1fxz_A 107 PQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQ 186 (476)
T ss_dssp ---CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC--------
T ss_pred cccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccccccccccccccc
Confidence 2678999999999999999999999999999999986553 222232
Q ss_pred ------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 027725 182 ------------ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLA 215 (219)
Q Consensus 182 ------------~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~~ 215 (219)
.++|+ ++++++|+++|+++.++++||+++..
T Consensus 187 ~~~~~~~~~~~~~~if~---gf~~~vLa~af~v~~~~~~kl~~~~~ 229 (476)
T 1fxz_A 187 KGKHQQEEENEGGSILS---GFTLEFLEHAFSVDKQIAKNLQGENE 229 (476)
T ss_dssp -----------CCCGGG---GSCHHHHHHHHTCCHHHHHHHSCC--
T ss_pred ccccccccccccchhhh---cCCHHHHHhhhCCCHHHHHhhhcccc
Confidence 36887 79999999999999999999987654
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.87 E-value=3.3e-22 Score=181.03 Aligned_cols=138 Identities=17% Similarity=0.289 Sum_probs=115.9
Q ss_pred CCCcEEEEecc--cCCCCCCccc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEE
Q 027725 71 SVGSLVTAANV--EKIPGLNTLG-VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYV 147 (219)
Q Consensus 71 ~~g~~~~~~~~--~~~P~l~~~g-is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~ 147 (219)
..|+.++.... ...+.+++++ +++++++++||++.+|| |++++|++||++|+++++++++ ++..++.+++||+++
T Consensus 25 ~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~ 102 (416)
T 1uij_A 25 NQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQR 102 (416)
T ss_dssp CSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEE
T ss_pred cCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEE
Confidence 45666777633 3457788887 99999999999999999 7679999999999999999876 555689999999999
Q ss_pred ECCCCeEEEEeCC-CCCEEEEEEec-CCCCccc---hhch-----hhhcCCCCCCHHHHHHHcCCCHHHHHHHH-hh
Q 027725 148 FPKALVHFQKNNG-DKPASVISAFN-SQLPGTQ---SIAA-----TLFTATPPVPDNVLTKAFQVGTKEIEKIK-SK 213 (219)
Q Consensus 148 ~P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~~---~~~~-----~lf~~~~~~~~~vl~~af~~~~~~v~~l~-~~ 213 (219)
+|+|..||++|.| ++++++++++. +++|+.+ .++. ++|+ ++|+++|+++|++|++++++|+ ++
T Consensus 103 iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~---~~~~~vLa~af~v~~~~v~~l~~~~ 176 (416)
T 1uij_A 103 IPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ---GFSHNILETSFHSEFEEINRVLFGE 176 (416)
T ss_dssp ECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHHTCT
T ss_pred ECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh---cCCHHHHHHHhCcCHHHHHhhhhcc
Confidence 9999999999995 99999999986 4666633 3332 3666 6999999999999999999999 54
No 21
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.87 E-value=6.7e-22 Score=179.79 Aligned_cols=138 Identities=17% Similarity=0.249 Sum_probs=116.8
Q ss_pred CCCcEEEEecc--cCCCCCCccc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEE
Q 027725 71 SVGSLVTAANV--EKIPGLNTLG-VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYV 147 (219)
Q Consensus 71 ~~g~~~~~~~~--~~~P~l~~~g-is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~ 147 (219)
..|+.++.+.. .+.|.+++++ +++++++++||++.+|| |++++|++||++|+++++++++ ++...+.|++||+++
T Consensus 37 se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~ 114 (434)
T 2ea7_A 37 NEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQK 114 (434)
T ss_dssp ETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEE
T ss_pred cCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEE
Confidence 35667777633 5668888888 99999999999999999 7789999999999999999874 445689999999999
Q ss_pred ECCCCeEEEEeCC-CCCEEEEEEec-CCCCccc---hhch-----hhhcCCCCCCHHHHHHHcCCCHHHHHHHH-hh
Q 027725 148 FPKALVHFQKNNG-DKPASVISAFN-SQLPGTQ---SIAA-----TLFTATPPVPDNVLTKAFQVGTKEIEKIK-SK 213 (219)
Q Consensus 148 ~P~g~~H~~~N~g-~~~a~~l~~~~-s~~pg~~---~~~~-----~lf~~~~~~~~~vl~~af~~~~~~v~~l~-~~ 213 (219)
+|+|..||++|.| ++++++++++. +++|+.+ .++. ++|+ ++|+++|+++|++|++++++|+ ++
T Consensus 115 iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~---~~~~~vLa~af~v~~~~v~~l~~~~ 188 (434)
T 2ea7_A 115 IPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR---GFSKNILEASFDSDFKEINRVLFGE 188 (434)
T ss_dssp ECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHHTCC
T ss_pred ECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh---cCCHHHHHHHhCCCHHHHHhhhhcc
Confidence 9999999999998 78999999875 5666532 3433 3666 6999999999999999999999 53
No 22
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.87 E-value=3.6e-22 Score=183.35 Aligned_cols=132 Identities=20% Similarity=0.354 Sum_probs=114.4
Q ss_pred EEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC-CeEE------------------
Q 027725 76 VTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA-DKLI------------------ 136 (219)
Q Consensus 76 ~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~-~~~~------------------ 136 (219)
++.++..++|+|+++|++++|+++.||++.+||+| +++|++||++|++.++++.+. .+.+
T Consensus 30 ~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~ 108 (496)
T 3ksc_A 30 LIETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRH 108 (496)
T ss_dssp EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC---------------CCCC
T ss_pred EEEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccch
Confidence 55566688999999999999999999999999999 799999999999999999764 2322
Q ss_pred --EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCcc--------chhc------------------------h
Q 027725 137 --SKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGT--------QSIA------------------------A 182 (219)
Q Consensus 137 --~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~--------~~~~------------------------~ 182 (219)
.+.|++||+|+||+|++||++|.|+++++++++++..++.. +.++ .
T Consensus 109 qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ 188 (496)
T 3ksc_A 109 QKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQENEGN 188 (496)
T ss_dssp CCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-----------CC
T ss_pred heeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccccccCC
Confidence 45999999999999999999999999999999997766422 2221 4
Q ss_pred hhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027725 183 TLFTATPPVPDNVLTKAFQVGTKEIEKIK 211 (219)
Q Consensus 183 ~lf~~~~~~~~~vl~~af~~~~~~v~~l~ 211 (219)
++|+ +|+.++|+.||+++.++++||.
T Consensus 189 ni~s---gF~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 189 NIFS---GFKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp SGGG---GSCHHHHHHHHTCCHHHHHHHT
T ss_pred Cchh---hcCHHHHHHHHCCCHHHHHHHH
Confidence 7887 7999999999999999999998
No 23
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.87 E-value=4.4e-22 Score=181.50 Aligned_cols=138 Identities=21% Similarity=0.381 Sum_probs=116.6
Q ss_pred CCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC-CeEE-------------
Q 027725 71 SVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA-DKLI------------- 136 (219)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~-~~~~------------- 136 (219)
..|+.+..++ .+.+.|+++|++++|++++||++.+|||| ++.|++||++|++.++++.++ .+.+
T Consensus 30 se~G~~e~~d-~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~ 107 (465)
T 3qac_A 30 AERGLTEVWD-SNEQEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDE 107 (465)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC-------------
T ss_pred CCCcEEEEEC-CCChhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhcccccccc
Confidence 3466666666 44578999999999999999999999999 799999999999999999653 1222
Q ss_pred -----------------------EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCC---------ccchhc---
Q 027725 137 -----------------------SKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLP---------GTQSIA--- 181 (219)
Q Consensus 137 -----------------------~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~p---------g~~~~~--- 181 (219)
.+.+++||++++|+|+.||++|.|++++++++++++.+. ..+.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~ 187 (465)
T 3qac_A 108 RIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGKP 187 (465)
T ss_dssp -----------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSCC
T ss_pred ccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCCC
Confidence 468999999999999999999999999999999987643 334443
Q ss_pred ---------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027725 182 ---------------------ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 213 (219)
Q Consensus 182 ---------------------~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~ 213 (219)
.++|+ ++++++|+++|+++.++++||++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 188 QQEHSGEHQFSRESRRGERNTGNIFR---GFETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCSCC--------------CCCCGGG---GSCHHHHHHHHTCCHHHHHHHHTT
T ss_pred ccccccccccccccccccccccchhh---cCCHHHHHHHhCCCHHHHHHhhhc
Confidence 36887 799999999999999999999865
No 24
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.86 E-value=1.1e-21 Score=176.24 Aligned_cols=137 Identities=12% Similarity=0.148 Sum_probs=117.2
Q ss_pred CCCCcEEEEe--cccCCCCCCccc-eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCE-
Q 027725 70 NSVGSLVTAA--NVEKIPGLNTLG-VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEI- 145 (219)
Q Consensus 70 ~~~g~~~~~~--~~~~~P~l~~~g-is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv- 145 (219)
...++.++.+ ...+.|.|++++ +++++++++||++.+|||| +++|++||++|++++++++++++ .++.|++||+
T Consensus 27 ~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~~~~~-~~~~l~~GDv~ 104 (397)
T 2phl_A 27 KNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVKPDDR-REYFFLTSDNP 104 (397)
T ss_dssp EETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEETTTE-EEEEEEESSCT
T ss_pred EcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEeCCCc-EEEEECCCCcc
Confidence 3556677776 445668999998 9999999999999999999 59999999999999999987666 4899999999
Q ss_pred -----EEECCCCeEEEEeCC-CCCEEEEEEecCCC-C--ccchhc-----hhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027725 146 -----YVFPKALVHFQKNNG-DKPASVISAFNSQL-P--GTQSIA-----ATLFTATPPVPDNVLTKAFQVGTKEIEKIK 211 (219)
Q Consensus 146 -----~~~P~g~~H~~~N~g-~~~a~~l~~~~s~~-p--g~~~~~-----~~lf~~~~~~~~~vl~~af~~~~~~v~~l~ 211 (219)
++||+|++||++|.| ++++++++++++.+ | ..+.++ .++|+ ++|++||+++|+++.+++++|+
T Consensus 105 ~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~---~~~~~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 105 IFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ---EFSKHILEASFNSKFEEINRVL 181 (397)
T ss_dssp TSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG---GSCHHHHHHHHTSCHHHHHHHH
T ss_pred cccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh---cCCHHHHHHHhCCCHHHHHhhh
Confidence 999999999999999 78999999987543 3 223332 24666 6999999999999999999999
No 25
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.85 E-value=2.8e-21 Score=177.94 Aligned_cols=138 Identities=22% Similarity=0.395 Sum_probs=115.8
Q ss_pred CcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-----------------e-
Q 027725 73 GSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-----------------K- 134 (219)
Q Consensus 73 g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-----------------~- 134 (219)
|+ ++.+...+.|.|+++|++++++++.||++.+||||+ +.|++||++|++.++++.++. +
T Consensus 27 ~G-~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~ 104 (493)
T 2d5f_A 27 GG-LIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQ 104 (493)
T ss_dssp SE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC-----------
T ss_pred Cc-EEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccccc
Confidence 44 455666778999999999999999999999999998 799999999999999996431 0
Q ss_pred -------EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCC--------ccchhc------------------
Q 027725 135 -------LISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLP--------GTQSIA------------------ 181 (219)
Q Consensus 135 -------~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~p--------g~~~~~------------------ 181 (219)
...+.|++||+++||+|++||++|.|+++++++++++..+. ..+.++
T Consensus 105 ~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 184 (493)
T 2d5f_A 105 QQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQK 184 (493)
T ss_dssp --CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC------
T ss_pred cccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccccc
Confidence 12568999999999999999999999999999999884432 222232
Q ss_pred -----------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhhcC
Q 027725 182 -----------------ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSKLA 215 (219)
Q Consensus 182 -----------------~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~~~ 215 (219)
.++|+ +|++++|+++|+++.+++++|++...
T Consensus 185 ~~~~~~~~~~~~~~~~~~nif~---gf~~e~La~aF~v~~~~v~kl~~~~~ 232 (493)
T 2d5f_A 185 SHGGRKQGQHQQQEEEGGSVLS---GFSKHFLAQSFNTNEDTAEKLRSPDD 232 (493)
T ss_dssp ---------------CCCCGGG---GSCHHHHHHHTTCCHHHHHHTTCTTC
T ss_pred ccccccccccccccccccchhh---cCCHHHHHhHhCCCHHHHHHhhhccc
Confidence 36787 79999999999999999999997654
No 26
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.85 E-value=8.1e-21 Score=171.71 Aligned_cols=134 Identities=16% Similarity=0.278 Sum_probs=109.5
Q ss_pred CCcEEEEec-----ccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 72 VGSLVTAAN-----VEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 72 ~g~~~~~~~-----~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
.++.++.+. ...+|+|++ +++++++++|+++.+|| |++++|++||++|+++++++++ ++.+.+.|++||++
T Consensus 21 e~G~i~~l~~f~~~s~~l~~l~~--~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~-~~~~~~~l~~GDv~ 96 (418)
T 3s7i_A 21 QNGRIRVLQRFDQRSRQFQNLQN--HRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANG-NNRKSFNLDEGHAL 96 (418)
T ss_dssp SSEEEEEECCHHHHCGGGGGGTT--CEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcchhcccccc--eEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEec-CCEEEEEecCCCEE
Confidence 445676663 356777774 57778999999999999 8889999999999999999986 44568999999999
Q ss_pred EECCCCeEEEEeCCCC-CEEEEEE-ecCCCCccchh--------chhhhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 027725 147 VFPKALVHFQKNNGDK-PASVISA-FNSQLPGTQSI--------AATLFTATPPVPDNVLTKAFQVGTKEIEKIKS 212 (219)
Q Consensus 147 ~~P~g~~H~~~N~g~~-~a~~l~~-~~s~~pg~~~~--------~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~ 212 (219)
+||+|++||++|.|+. .++++++ .++++||.+.. ..++|+ ++|+++|+++|+++++++++|+.
T Consensus 97 ~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~---gf~~evLa~af~v~~~~v~kl~~ 169 (418)
T 3s7i_A 97 RIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ---GFSRNTLEAAFNAEFNEIRRVLL 169 (418)
T ss_dssp EECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHTT
T ss_pred EECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh---cCCHHHHHHHHCcCHHHHHhhhc
Confidence 9999999999998764 5666653 56667875433 125776 79999999999999999999983
No 27
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.84 E-value=7.5e-21 Score=175.24 Aligned_cols=137 Identities=19% Similarity=0.309 Sum_probs=115.2
Q ss_pred CCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-----------------
Q 027725 72 VGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK----------------- 134 (219)
Q Consensus 72 ~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~----------------- 134 (219)
-|+ ++.+...+.|+|+++|+++++++++||++..||||+ +.|++||++|++.++++.+++.
T Consensus 29 e~G-~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~ 106 (510)
T 3c3v_A 29 EGG-YIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQR 106 (510)
T ss_dssp TTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC--------
T ss_pred CCc-eEEEeCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccc
Confidence 344 455566778999999999999999999999999997 8999999999999999986420
Q ss_pred ------------------EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCc--------cchhc-------
Q 027725 135 ------------------LISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPG--------TQSIA------- 181 (219)
Q Consensus 135 ------------------~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg--------~~~~~------- 181 (219)
.+.+.|++||+++||+|++||++|.|+++++++++++..++. .+.++
T Consensus 107 ~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~ 186 (510)
T 3c3v_A 107 PPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEF 186 (510)
T ss_dssp ------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTT
T ss_pred ccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCccccc
Confidence 013689999999999999999999999999999999876532 22221
Q ss_pred -----------------------------------------------------hhhhcCCCCCCHHHHHHHcCCC-HHHH
Q 027725 182 -----------------------------------------------------ATLFTATPPVPDNVLTKAFQVG-TKEI 207 (219)
Q Consensus 182 -----------------------------------------------------~~lf~~~~~~~~~vl~~af~~~-~~~v 207 (219)
.++|+ +++.++|+++|+++ ++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~~~La~af~v~~~~~~ 263 (510)
T 3c3v_A 187 LRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS---GFTPEFLAQAFQVDDRQIV 263 (510)
T ss_dssp GGGCC------------------------------------------------CCTGG---GSCHHHHHHHHTCCCHHHH
T ss_pred chhhhcccccccccccccccccccccccccccccccccccccccccccccccccccee---cCCHHHHHHHhCCCHHHHH
Confidence 25777 89999999999999 9999
Q ss_pred HHHHhh
Q 027725 208 EKIKSK 213 (219)
Q Consensus 208 ~~l~~~ 213 (219)
++|++.
T Consensus 264 ~~l~~~ 269 (510)
T 3c3v_A 264 QNLRGE 269 (510)
T ss_dssp HHHTTT
T ss_pred HHhhcc
Confidence 999754
No 28
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.83 E-value=1.6e-20 Score=171.30 Aligned_cols=138 Identities=19% Similarity=0.326 Sum_probs=114.7
Q ss_pred CCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-eE--------------
Q 027725 71 SVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-KL-------------- 135 (219)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~~-------------- 135 (219)
..++.+...+.. -|+|+++|++++|+++.|+++.+||+|+ ++|++||++|++.++++.+.- +.
T Consensus 23 se~G~~e~w~~~-~~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~ 100 (466)
T 3kgl_A 23 AEAGRIEVWDHH-APQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSP 100 (466)
T ss_dssp ETTEEEEECCTT-SHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC---
T ss_pred CCCcEEEEECCC-ChhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccccc
Confidence 345556655544 4999999999999999999999999998 999999999999999997521 00
Q ss_pred --------------------------------------------EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEec
Q 027725 136 --------------------------------------------ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFN 171 (219)
Q Consensus 136 --------------------------------------------~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~ 171 (219)
..+.|++||+++||+|++||++|.|+++++++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d 180 (466)
T 3kgl_A 101 FGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLD 180 (466)
T ss_dssp --------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEc
Confidence 124899999999999999999999999999999997
Q ss_pred CCCCc--------cchhc------------------hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027725 172 SQLPG--------TQSIA------------------ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 213 (219)
Q Consensus 172 s~~pg--------~~~~~------------------~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~ 213 (219)
..+.. .+.++ .++|+ +++.++|+++|+++.++++||++.
T Consensus 181 ~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s---GF~~e~La~Af~v~~e~~~kL~~~ 245 (466)
T 3kgl_A 181 LASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN---GFTPEVLAKAFKIDVRTAQQLQNQ 245 (466)
T ss_dssp SSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG---GSCHHHHHHHHTSCHHHHHHHTCT
T ss_pred CCCcccccCCceeeeEecCCCccccccccccccccCCCccc---cCCHHHHHHHhCCCHHHHHHHhcc
Confidence 65532 23332 26777 799999999999999999999764
No 29
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.83 E-value=1.5e-19 Score=159.82 Aligned_cols=149 Identities=21% Similarity=0.305 Sum_probs=124.7
Q ss_pred ccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEE
Q 027725 57 FFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLI 136 (219)
Q Consensus 57 f~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~ 136 (219)
+.|+....++.. ..|+.++..+..++|.+. ++++.++.++||+..++|||+++.|++||++|++++++++++|+..
T Consensus 21 ~~~~~~~~~~~~--~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~ 96 (361)
T 2vqa_A 21 FTYAFSKTPLVL--YDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE 96 (361)
T ss_dssp SEECGGGSCCEE--ETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE
T ss_pred eEEEcccCCcee--cCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE
Confidence 666665554422 367788889899999887 4588999999999999999988999999999999999988766444
Q ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCcc---chhchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027725 137 SKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGT---QSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 213 (219)
Q Consensus 137 ~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~---~~~~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~ 213 (219)
.+.|++||+++||+|.+|++.|.++++++++.+++..++.. +....+ ++ .+|.++|+++|+++.+.++++++.
T Consensus 97 ~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~-~~---~~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 97 IADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVTDW-LS---HTPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp EEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHHHH-HH---TSCHHHHHHHHTCCHHHHTTSCSS
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHhHH-HH---hCCHHHHHHHhCcCHHHHHhcccc
Confidence 68999999999999999999999999999999998877653 444434 45 699999999999999999988754
No 30
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.82 E-value=2.7e-20 Score=171.14 Aligned_cols=138 Identities=16% Similarity=0.327 Sum_probs=114.6
Q ss_pred CCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-e---------------
Q 027725 71 SVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-K--------------- 134 (219)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-~--------------- 134 (219)
.-|+ ++.++..++|+|+++|++++|+++.|+|+.+||+|+ +.|++||++|++.++++.+.- +
T Consensus 28 se~G-~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~ 105 (531)
T 3fz3_A 28 AEAG-QIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQ 105 (531)
T ss_dssp ETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC--------
T ss_pred cCCc-eEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccc
Confidence 3455 444555789999999999999999999999999998 999999999999999986520 0
Q ss_pred -----------------------------------------------------------------EEEEEEcCCCEEEEC
Q 027725 135 -----------------------------------------------------------------LISKTVKKGEIYVFP 149 (219)
Q Consensus 135 -----------------------------------------------------------------~~~~~L~~GDv~~~P 149 (219)
...+.+++||++.+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiP 185 (531)
T 3fz3_A 106 EQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIP 185 (531)
T ss_dssp -----------------------------------------------------------CCSCEESCCEEEETTEEEEEC
T ss_pred cccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEEC
Confidence 114578999999999
Q ss_pred CCCeEEEEeCCCCCEEEEEEecCCCCc--------cchh-----------------------------------------
Q 027725 150 KALVHFQKNNGDKPASVISAFNSQLPG--------TQSI----------------------------------------- 180 (219)
Q Consensus 150 ~g~~H~~~N~g~~~a~~l~~~~s~~pg--------~~~~----------------------------------------- 180 (219)
+|..||++|.|+++++++++++..+.. .+.+
T Consensus 186 aG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (531)
T 3fz3_A 186 AGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQ 265 (531)
T ss_dssp TTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-------------------------------
T ss_pred CCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhc
Confidence 999999999999999999998654421 1111
Q ss_pred --chhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027725 181 --AATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 213 (219)
Q Consensus 181 --~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~ 213 (219)
..++|+ +|+.++|+.||+++.++++||...
T Consensus 266 ~~~~nifs---GFs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 266 GNGNNVFS---GFNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp -CCSSGGG---GSCHHHHHHHHTSCHHHHHHHHTS
T ss_pred ccCCCeee---cCCHHHHHHHHCCCHHHHHHHhcc
Confidence 136887 899999999999999999999864
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.80 E-value=1.3e-18 Score=155.14 Aligned_cols=155 Identities=17% Similarity=0.289 Sum_probs=126.9
Q ss_pred CcccccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC
Q 027725 53 TADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA 132 (219)
Q Consensus 53 ~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~ 132 (219)
.+..|+|+....++ .. ..|+.++......++... ++++.++.++||+..++|||+.+.|++||++|++++.+.+.+
T Consensus 222 ~~~~~v~~~~~~~~-~~-~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~ 297 (385)
T 1j58_A 222 VPYPFTYRLLEQEP-IE-SEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASD 297 (385)
T ss_dssp CSSCSEEEGGGSCC-EE-CSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEET
T ss_pred CCCCeeeecccCCC-ee-CCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCC
Confidence 34567777655444 22 335567777777777544 578999999999999999999669999999999999998555
Q ss_pred CeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 027725 133 DKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIKS 212 (219)
Q Consensus 133 ~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~ 212 (219)
|+...+.|++||++++|+|..|++.|.|++++++++++....+....+..++ + .+++++++++|+++++++++|++
T Consensus 298 g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~---~~~~~v~~~~f~~~~~~~~~l~~ 373 (385)
T 1j58_A 298 GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-A---MLPETFVQAHLDLGKDFTDVLSK 373 (385)
T ss_dssp TEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-H---TSCHHHHHHHHTCCHHHHTTCCS
T ss_pred CcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-H---hCCHHHHHHHhCCCHHHHHhhhc
Confidence 5444789999999999999999999999999999999998877777666676 4 59999999999999999999986
Q ss_pred hcC
Q 027725 213 KLA 215 (219)
Q Consensus 213 ~~~ 215 (219)
...
T Consensus 374 ~~~ 376 (385)
T 1j58_A 374 EKH 376 (385)
T ss_dssp SCC
T ss_pred cCC
Confidence 543
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.76 E-value=3.6e-18 Score=152.35 Aligned_cols=147 Identities=17% Similarity=0.302 Sum_probs=122.3
Q ss_pred ccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEE
Q 027725 57 FFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLI 136 (219)
Q Consensus 57 f~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~ 136 (219)
+.|+....+... ..|+.++.++...+|.++ ++++.++.+.||+..++|||+ +.|++||++|++++++++++|+.+
T Consensus 48 ~~~~~~~~~~~~--~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~ 122 (385)
T 1j58_A 48 MKFSFSDTHNRL--EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSF 122 (385)
T ss_dssp CEECGGGSCCEE--ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEE
T ss_pred eEEEcccCCccc--cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEE
Confidence 666655444432 467789999999999987 678999999999999999998 899999999999999988777755
Q ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCccch--hchhhhcCCCCCCHHHHHHHcCCCHHHHHHHHh
Q 027725 137 SKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGTQS--IAATLFTATPPVPDNVLTKAFQVGTKEIEKIKS 212 (219)
Q Consensus 137 ~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~--~~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~ 212 (219)
.+.|++||++++|+|..|++.|.+ ++++++.+++...+.... ...++|+ .+|.++|+++|+++.++++++++
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLA---HTPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHH---TSCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhh---cccHHHHHHHhCCCHHHHHhccc
Confidence 679999999999999999999987 468999989887775433 1234556 69999999999999999888764
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.71 E-value=4.7e-18 Score=119.78 Aligned_cols=75 Identities=24% Similarity=0.372 Sum_probs=67.2
Q ss_pred ccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe
Q 027725 59 FAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK 134 (219)
Q Consensus 59 ~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~ 134 (219)
|+.+.+.+.+++..|. ++.++..++|+|+++|++++|+++.||++.+||||++|+|++||++|+++++++++.|+
T Consensus 4 fnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g~ 78 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 78 (79)
T ss_dssp EETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC--
T ss_pred cccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCCC
Confidence 6777777777778776 58999999999999999999999999999999999999999999999999999987553
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=2.1e-14 Score=107.97 Aligned_cols=83 Identities=20% Similarity=0.239 Sum_probs=72.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEE-EccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGF-ISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~-~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
++.+.++.++||+..++|+|+...|++||++|++++.+ .+ + .+.|++||++++|+|..|++.|.++++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~---~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v 112 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNG---I--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSV 112 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTT---C--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCC---e--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEE
Confidence 46888999999999999999866999999999999977 33 3 789999999999999999999999999999999
Q ss_pred ecCCCCccc
Q 027725 170 FNSQLPGTQ 178 (219)
Q Consensus 170 ~~s~~pg~~ 178 (219)
+....+++.
T Consensus 113 ~~p~~~~~~ 121 (125)
T 3h8u_A 113 VAPGNAGFA 121 (125)
T ss_dssp EESTTCCCC
T ss_pred ECCCcccch
Confidence 887666654
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.51 E-value=4.4e-13 Score=106.78 Aligned_cols=118 Identities=14% Similarity=0.209 Sum_probs=89.2
Q ss_pred CCCcCcccccccccCCCC---cccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEE
Q 027725 49 SANITADDFFFAGLAKPG---VVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELD 125 (219)
Q Consensus 49 p~~~~~~df~~~~~~~~~---~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~ 125 (219)
++.+..+++.|....... ......|...+....... +....++.+.++.++||+..++|+|+ ..|++||++|+++
T Consensus 11 ~~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~ 88 (167)
T 3ibm_A 11 SRVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAE 88 (167)
T ss_dssp CEEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEE
T ss_pred CceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEE
Confidence 456778889998754311 011124554444433222 22234678899999999999999997 8999999999999
Q ss_pred EEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCC-CCCEEEEEEecCC
Q 027725 126 VGFISTADKLISKTVKKGEIYVFPKALVHFQKNNG-DKPASVISAFNSQ 173 (219)
Q Consensus 126 v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g-~~~a~~l~~~~s~ 173 (219)
+.+.+. .+.|++||++++|+|..|.+.|.+ +++++++++....
T Consensus 89 ~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 89 VVLDDR-----VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EEETTE-----EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEECCE-----EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 988653 789999999999999999999999 9999999988754
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.50 E-value=1.3e-13 Score=108.60 Aligned_cols=83 Identities=18% Similarity=0.237 Sum_probs=73.0
Q ss_pred ceEEEEEEEcCCC-cCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCC-CeEEEEeCCCCCEEEEE
Q 027725 91 GVSLSRIDYEAGG-LNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKA-LVHFQKNNGDKPASVIS 168 (219)
Q Consensus 91 gis~~~~~l~pg~-~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g-~~H~~~N~g~~~a~~l~ 168 (219)
++++.++.++||+ ..++|||+...|++||++|++++.+.+ + .+.|++||++++|+| ..|++.|.+++++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~---~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMEN---D--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECC---E--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 5688899999999 589999966899999999999998755 3 789999999999998 99999999999999999
Q ss_pred EecCCCCccc
Q 027725 169 AFNSQLPGTQ 178 (219)
Q Consensus 169 ~~~s~~pg~~ 178 (219)
+.....+...
T Consensus 120 v~~p~~~~~~ 129 (162)
T 3l2h_A 120 IGQRLDQDVV 129 (162)
T ss_dssp EEECCSEEEE
T ss_pred EECCCCCCeE
Confidence 8887654433
No 37
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.48 E-value=1.3e-13 Score=99.70 Aligned_cols=76 Identities=17% Similarity=0.246 Sum_probs=66.7
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.+.+.+++++||+..++|.|+...|++||++|++++.+.+ +. ....|++||++++|+|..|+..|.|+++++++.+
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~--g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE--GS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT--EE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC--CC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 5788999999999999999986557999999999998754 21 2689999999999999999999999999998876
No 38
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.48 E-value=1.2e-13 Score=116.23 Aligned_cols=81 Identities=20% Similarity=0.253 Sum_probs=70.9
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEE--------Ecc-------CCeEEEEEEcCCCEEEECCCCeE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGF--------IST-------ADKLISKTVKKGEIYVFPKALVH 154 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~--------~~~-------~~~~~~~~L~~GDv~~~P~g~~H 154 (219)
.++++.++.++||+..++|+|++.+|++||++|++++.+ .+. +++.+.+.+++||++++|+|.+|
T Consensus 41 ~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H 120 (239)
T 2xlg_A 41 IGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMH 120 (239)
T ss_dssp EEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEE
T ss_pred CCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCE
Confidence 467889999999999999999989999999999999988 332 12455789999999999999999
Q ss_pred EEEeCCCCCEEE-EEEe
Q 027725 155 FQKNNGDKPASV-ISAF 170 (219)
Q Consensus 155 ~~~N~g~~~a~~-l~~~ 170 (219)
.++|.+++++++ +..+
T Consensus 121 ~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 121 GFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEECCSSSCEEEEEEEE
T ss_pred EEEeCCCCCEEEEEEEE
Confidence 999999999998 6766
No 39
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.47 E-value=2.8e-13 Score=97.46 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=69.6
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.++.+.++.++||...++|+|+...|++||++|++++.+.+ + ...+++||++++|+|..|.+.|.++++++++.+
T Consensus 26 ~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v 100 (105)
T 1v70_A 26 ERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVGE---E--EALLAPGMAAFAPAGAPHGVRNESASPALLLVV 100 (105)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 35788899999999999999986689999999999998754 3 789999999999999999999999999999988
Q ss_pred ecC
Q 027725 170 FNS 172 (219)
Q Consensus 170 ~~s 172 (219)
+..
T Consensus 101 ~~p 103 (105)
T 1v70_A 101 TAP 103 (105)
T ss_dssp EES
T ss_pred eCC
Confidence 764
No 40
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.46 E-value=3.4e-13 Score=106.35 Aligned_cols=83 Identities=17% Similarity=0.159 Sum_probs=71.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC----CeEEEEEEcCCCEEEECCCCeEEEEeCC-CCCEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA----DKLISKTVKKGEIYVFPKALVHFQKNNG-DKPAS 165 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~----~~~~~~~L~~GDv~~~P~g~~H~~~N~g-~~~a~ 165 (219)
++.+.++.++||...++|+|+ ..|++||++|++++.+.+.. ++...+.|++||++++|+|..|++.|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 568888999999999999997 79999999999999987621 1223789999999999999999999999 89999
Q ss_pred EEEEecCCC
Q 027725 166 VISAFNSQL 174 (219)
Q Consensus 166 ~l~~~~s~~ 174 (219)
+++++....
T Consensus 119 ~l~i~~~~~ 127 (163)
T 1lr5_A 119 VLVIISRPP 127 (163)
T ss_dssp EEEEEESSS
T ss_pred EEEEECCCC
Confidence 999887643
No 41
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.46 E-value=8.3e-13 Score=102.66 Aligned_cols=83 Identities=18% Similarity=0.247 Sum_probs=71.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.+++.++.++||...++|+|+...|++||++|++++.+.+.... .+...|++||++++|+|..|.+.|.++++++++++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 46788899999999999999867799999999999998775211 12379999999999999999999999999999988
Q ss_pred ecCC
Q 027725 170 FNSQ 173 (219)
Q Consensus 170 ~~s~ 173 (219)
+...
T Consensus 122 ~~~~ 125 (148)
T 2oa2_A 122 YAPP 125 (148)
T ss_dssp EESC
T ss_pred ECCC
Confidence 7654
No 42
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.45 E-value=3.1e-13 Score=108.43 Aligned_cols=81 Identities=23% Similarity=0.353 Sum_probs=73.0
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.|..+.+++++||+..++|.|. ..|++||++|++++.+.+ ++ .+.|++||++ +|+|..|.++|.|+++++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~--ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDD--GA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGG--GC--EEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECC--Ce--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 4778899999999999999997 789999999999998862 23 6899999999 9999999999999999999999
Q ss_pred ecCCCCc
Q 027725 170 FNSQLPG 176 (219)
Q Consensus 170 ~~s~~pg 176 (219)
+....|-
T Consensus 151 ~~P~~p~ 157 (172)
T 3es1_A 151 LIEAPAY 157 (172)
T ss_dssp EEECCCC
T ss_pred EcCCCce
Confidence 9887774
No 43
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.43 E-value=5.5e-13 Score=105.74 Aligned_cols=83 Identities=22% Similarity=0.238 Sum_probs=72.9
Q ss_pred ceEEEEEEEcCCCcC-CCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCC--CeEEEEeCCCCCEEEE
Q 027725 91 GVSLSRIDYEAGGLN-PPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKA--LVHFQKNNGDKPASVI 167 (219)
Q Consensus 91 gis~~~~~l~pg~~~-~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g--~~H~~~N~g~~~a~~l 167 (219)
.+.+.++.++||+.. ++|+|+..+|++||++|++++.+.+. .+.|++||++++|+| ..|.+.|.++++++++
T Consensus 42 ~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l 116 (163)
T 3i7d_A 42 QFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQG-----EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFL 116 (163)
T ss_dssp SEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCCCBEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCE-----EEEeCCCCEEEECCCCCcceEEEECCCCCEEEE
Confidence 578889999999965 79999855899999999999988653 789999999999999 9999999999999999
Q ss_pred EEecCCCCccc
Q 027725 168 SAFNSQLPGTQ 178 (219)
Q Consensus 168 ~~~~s~~pg~~ 178 (219)
++.........
T Consensus 117 ~v~~p~~~d~~ 127 (163)
T 3i7d_A 117 VVGTRTPTETA 127 (163)
T ss_dssp EEEECCSCEEE
T ss_pred EEECCCCCCcc
Confidence 99887654433
No 44
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.42 E-value=1.4e-12 Score=95.42 Aligned_cols=78 Identities=17% Similarity=0.329 Sum_probs=69.5
Q ss_pred ceEEEEEEEcCCCcCCCC--CCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPH--THPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH--~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
++.+.++.++||...++| +|+...|++||++|++++.+.+ + .+.|++||++++|+|..|.+.|.++++++++.
T Consensus 20 ~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~---~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~ 94 (113)
T 2gu9_A 20 QVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDG---H--TQALQAGSLIAIERGQAHEIRNTGDTPLKTVN 94 (113)
T ss_dssp TEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETT---E--EEEECTTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred cEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEE
Confidence 568889999999998888 9976799999999999998754 3 78999999999999999999999999999998
Q ss_pred EecCC
Q 027725 169 AFNSQ 173 (219)
Q Consensus 169 ~~~s~ 173 (219)
++...
T Consensus 95 v~~~~ 99 (113)
T 2gu9_A 95 FYHPP 99 (113)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 87653
No 45
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.42 E-value=2.4e-12 Score=104.53 Aligned_cols=83 Identities=16% Similarity=0.252 Sum_probs=74.2
Q ss_pred ceEEEEEEEcCCCc------CCCCCCC--CCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 027725 91 GVSLSRIDYEAGGL------NPPHTHP--RATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDK 162 (219)
Q Consensus 91 gis~~~~~l~pg~~------~~pH~H~--~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~ 162 (219)
.+.+.++.++||+. .++|+|+ ...|++||++|++.+.+.+..|+.....|++||++++|+|..|++.|.|++
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~ 145 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDE 145 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcc
Confidence 56788889999998 7899997 347999999999999998876776778999999999999999999999999
Q ss_pred CEEEEEEecCC
Q 027725 163 PASVISAFNSQ 173 (219)
Q Consensus 163 ~a~~l~~~~s~ 173 (219)
++++++++...
T Consensus 146 ~~~~l~v~~~~ 156 (190)
T 1x82_A 146 PFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEEEETT
T ss_pred cEEEEEEECCC
Confidence 99999988764
No 46
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.41 E-value=1.6e-12 Score=99.54 Aligned_cols=81 Identities=21% Similarity=0.327 Sum_probs=71.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEE--EEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVG--FISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~--~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.+++.++.++||+..++|+|+ ..|++||++|++++. +.+ + .+.+++||++++|+|..|.+.|.++++++++.
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~ 111 (145)
T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPDQG---R--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLV 111 (145)
T ss_dssp SEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGGGT---E--EEEECTTCEEEECTTCCBEEECCTTCCEEEEE
T ss_pred cEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeECC---E--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEE
Confidence 678889999999999999998 688899999999998 543 3 78999999999999999999999999999999
Q ss_pred EecCCCCcc
Q 027725 169 AFNSQLPGT 177 (219)
Q Consensus 169 ~~~s~~pg~ 177 (219)
+.....+..
T Consensus 112 i~~~~~~~~ 120 (145)
T 3ht1_A 112 VAPCERPPV 120 (145)
T ss_dssp EEESCCCCC
T ss_pred EECCCCCCe
Confidence 987776654
No 47
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.40 E-value=7.8e-13 Score=99.35 Aligned_cols=79 Identities=22% Similarity=0.384 Sum_probs=69.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
++.+.++.++||...++|+|+ ..|++||++|++++.+.+ + .+.|++||++++|+|..|.+.|.++ +++++.++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~ 112 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHP-HEQAGVMLEGTLELTIGE---E--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIF 112 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCS-SEEEEEEEEECEEEEETT---E--EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEE
Confidence 578999999999999999998 699999999999998854 3 7899999999999999999999987 89998888
Q ss_pred cCCCCc
Q 027725 171 NSQLPG 176 (219)
Q Consensus 171 ~s~~pg 176 (219)
.....+
T Consensus 113 ~p~~~d 118 (126)
T 4e2g_A 113 SPPRED 118 (126)
T ss_dssp ESCCHH
T ss_pred CCCCcc
Confidence 764433
No 48
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.39 E-value=1.8e-12 Score=102.23 Aligned_cols=79 Identities=14% Similarity=0.220 Sum_probs=71.4
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..+.+.++.++||+..++|+|+ ..|++||++|++++.+.+ + .+.|++||++++|+|..|.+.|.++++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v~g---~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLVGE---T--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEETT---E--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4678888999999999999998 689999999999998755 3 789999999999999999999999999999998
Q ss_pred ecCCC
Q 027725 170 FNSQL 174 (219)
Q Consensus 170 ~~s~~ 174 (219)
++...
T Consensus 116 ~~~~~ 120 (156)
T 3kgz_A 116 VNAAR 120 (156)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 87643
No 49
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.38 E-value=4e-12 Score=102.80 Aligned_cols=81 Identities=17% Similarity=0.242 Sum_probs=68.7
Q ss_pred CccceEEEEEEEcCCCcCC---CCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeC-CCCC
Q 027725 88 NTLGVSLSRIDYEAGGLNP---PHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNN-GDKP 163 (219)
Q Consensus 88 ~~~gis~~~~~l~pg~~~~---pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~-g~~~ 163 (219)
....+.+.++.++||+..+ +|+|+ ..|++||++|++++.+.+ .+....+.|++||+++||++.+|.+.|. ++++
T Consensus 113 ~~~~~~~~~~~~~pg~~~~~~~~h~h~-~~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~ 190 (198)
T 2bnm_A 113 RAPSLVPLVVDVLTDNPDDAKFNSGHA-GNEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTGS 190 (198)
T ss_dssp TSTTCEEEEEEECCCCGGGCCCCCCCS-SCEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSCC
T ss_pred CCCcceEEEEEEcCCCCCcccccccCC-CeEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCCC
Confidence 3446789999999999875 79998 699999999999999865 1111278999999999999999999999 9999
Q ss_pred EEEEEEe
Q 027725 164 ASVISAF 170 (219)
Q Consensus 164 a~~l~~~ 170 (219)
+++++++
T Consensus 191 ~~~l~v~ 197 (198)
T 2bnm_A 191 AKLIAVN 197 (198)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9998875
No 50
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.37 E-value=2.5e-13 Score=99.10 Aligned_cols=77 Identities=16% Similarity=0.187 Sum_probs=67.2
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.+.+.|++++||+..++|+|+...|+++|++|++++...+ +......+++||++++|+|..|+..|.|+++++++.+
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d--~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT--SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC--CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 5789999999999999999997789999999999987543 3333567999999999999999999999999999987
No 51
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.37 E-value=1.4e-12 Score=97.33 Aligned_cols=73 Identities=18% Similarity=0.270 Sum_probs=63.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
++++.++.++||...++|+|+ ..|++||++|++++.+.+ + .+.|++||.+++|+|..|.+.|.++....++.+
T Consensus 35 ~~~v~~~~l~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~~---~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v 107 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGSHSVA-GPSTIQCLEGEVEIGVDG---A--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVV 107 (114)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SCEEEEEEESCEEEEETT---E--EEEECTTEEEEECTTCCEEEEESSSEEEEEEEE
T ss_pred CEEEEEEEECCCCccCceeCC-CcEEEEEEECEEEEEECC---E--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEE
Confidence 678999999999999999998 689999999999998855 3 789999999999999999999986544444333
No 52
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.37 E-value=2.6e-12 Score=102.39 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=70.6
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.++.+.++.++||+..++|+|+ ..|++||++|++++.+.+ + .+.|++||++++|+|..|.+.|.++++++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v~g---~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMVGR---A--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEETT---E--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4678888999999999999998 689999999999998754 3 789999999999999999999999999999998
Q ss_pred ecCC
Q 027725 170 FNSQ 173 (219)
Q Consensus 170 ~~s~ 173 (219)
....
T Consensus 125 ~~~~ 128 (166)
T 3jzv_A 125 VNAE 128 (166)
T ss_dssp EESS
T ss_pred EccC
Confidence 8754
No 53
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.36 E-value=4.2e-12 Score=94.28 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=66.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEE-EEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISK-TVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~-~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
++.+.++.++||...++|+|+ ..|++||++|++++.+.+. .. .|++||++++|+|..|.+.|.+++++.++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~~~-----~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLEDQ-----EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEETTS-----CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEECCE-----EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 457788899999999999997 7999999999999987553 56 8999999999999999999999998888887
Q ss_pred ec
Q 027725 170 FN 171 (219)
Q Consensus 170 ~~ 171 (219)
..
T Consensus 100 ~~ 101 (117)
T 2b8m_A 100 KA 101 (117)
T ss_dssp EC
T ss_pred EC
Confidence 44
No 54
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.36 E-value=3.4e-12 Score=97.55 Aligned_cols=76 Identities=18% Similarity=0.241 Sum_probs=67.7
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..+.+.++.++||+..++|+|+...|++||++|++++.+.+ + .+.|++||++++|+|..|.+.|.++++++++++
T Consensus 55 ~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~---~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 55 KARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNG---K--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp SEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEETT---E--EEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred ceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEECC---E--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 35678889999999999999975699999999999998754 3 789999999999999999999999999998876
Q ss_pred e
Q 027725 170 F 170 (219)
Q Consensus 170 ~ 170 (219)
.
T Consensus 130 ~ 130 (133)
T 1o4t_A 130 I 130 (133)
T ss_dssp E
T ss_pred E
Confidence 4
No 55
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.36 E-value=3.9e-12 Score=94.03 Aligned_cols=78 Identities=19% Similarity=0.304 Sum_probs=67.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
++.+.++.++||...++|+|+ ..|++||++|++++.+.+ + ...|++||++++|+|..|.+.|.+ +++++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVDG---V--IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEETT---E--EEEECTTCEEEECTTCCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEECC---E--EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEE
Confidence 468899999999999999998 899999999999998744 3 789999999999999999999986 67888887
Q ss_pred cCCCCc
Q 027725 171 NSQLPG 176 (219)
Q Consensus 171 ~s~~pg 176 (219)
....++
T Consensus 105 ~p~~~d 110 (116)
T 2pfw_A 105 SPARED 110 (116)
T ss_dssp ESCCGG
T ss_pred CCchhh
Confidence 665443
No 56
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.33 E-value=1.1e-11 Score=93.26 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=67.9
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..+.+.+..++||...++|||. ..|++||++|++++.+.+ + .+.+++||++++|+|..|.+.|.+++++.++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~~---~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRIND---E--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEETT---E--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEECC---E--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 3568888999999999999996 899999999999998855 3 789999999999999999999999999888876
Q ss_pred ec
Q 027725 170 FN 171 (219)
Q Consensus 170 ~~ 171 (219)
+-
T Consensus 106 ~f 107 (128)
T 4i4a_A 106 WW 107 (128)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 57
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.33 E-value=1.4e-11 Score=95.80 Aligned_cols=97 Identities=22% Similarity=0.300 Sum_probs=77.9
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEE-EEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLIS-KTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~-~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.++++.++.++||...++|+|+ ..|++||++|++++.+.+. . ..|++||++++|+|..|++.|.+++++.+++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~-----~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 119 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHP-GGQILIVTRGKGFYQERGK-----PARILKKGDVVEIPPNVVHWHGAAPDEELVHIG 119 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECT-TCEEEEEEEEEEEEEETTS-----CCEEEETTCEEEECTTCCEEEEEBTTBCEEEEE
T ss_pred CcEEEEEEEECCCCccCceECC-CceEEEEEeCEEEEEECCE-----EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 4678999999999999999998 5999999999999987553 4 7899999999999999999999999999998
Q ss_pred EecCCCCccchhchhhhcCCCCCCHHHHHHH
Q 027725 169 AFNSQLPGTQSIAATLFTATPPVPDNVLTKA 199 (219)
Q Consensus 169 ~~~s~~pg~~~~~~~lf~~~~~~~~~vl~~a 199 (219)
+....... ...|+ . .+.++...++
T Consensus 120 v~~~~~~~---~~~wl-~---~v~~e~~~~~ 143 (147)
T 2f4p_A 120 ISTQVHLG---PAEWL-G---SVTEEEYRKA 143 (147)
T ss_dssp EECCGGGC---CCEEC-C---CCCHHHHHHH
T ss_pred EEccCCCC---Cceec-c---cCCHHHhhhc
Confidence 87653221 12233 3 4666666544
No 58
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.33 E-value=4.9e-12 Score=100.76 Aligned_cols=74 Identities=16% Similarity=0.154 Sum_probs=65.0
Q ss_pred eEEEEEEEcC-CCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 92 VSLSRIDYEA-GGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 92 is~~~~~l~p-g~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
+...+++++| |+...+|.|..++|++||++|++++.+.+. .+.|++||++++|+|..|.++|.++++++++.+.
T Consensus 88 ~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~-----~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~Vq 162 (166)
T 2vpv_A 88 FASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKN-----KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFVQ 162 (166)
T ss_dssp CEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred ceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEEE
Confidence 5677889999 777777655569999999999999998654 7899999999999999999999999999998864
No 59
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.32 E-value=4.4e-12 Score=95.87 Aligned_cols=78 Identities=26% Similarity=0.329 Sum_probs=69.4
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 89 TLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
..++++.++.++||...++|+|+ ..|++||++|++++.+.+. .+.+++||++++|+|..|.+.|.+++++.+++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKEQG-----EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 34678999999999999999998 7999999999999987543 68999999999999999999999999999888
Q ss_pred EecC
Q 027725 169 AFNS 172 (219)
Q Consensus 169 ~~~s 172 (219)
++..
T Consensus 119 v~~~ 122 (126)
T 1vj2_A 119 LIPK 122 (126)
T ss_dssp EEEG
T ss_pred EEcc
Confidence 7653
No 60
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.30 E-value=7.2e-12 Score=94.16 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=66.1
Q ss_pred cceEEEEEEEcCCCcCC-CCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNP-PHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~-pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.++.+.+..++||...+ +|+|+..++++||++|++++.+.+ + .+.+++||++++|+|..|.+.|.+++++.+++
T Consensus 24 ~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~---~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~ 98 (125)
T 3cew_A 24 TGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDG---E--KIELQAGDWLRIAPDGKRQISAASDSPIGFLC 98 (125)
T ss_dssp SSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETT---E--EEEEETTEEEEECTTCCEEEEEBTTBCEEEEE
T ss_pred CCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEEE
Confidence 45678888999999887 899984334555999999998754 3 78999999999999999999999989998888
Q ss_pred EecCC
Q 027725 169 AFNSQ 173 (219)
Q Consensus 169 ~~~s~ 173 (219)
++...
T Consensus 99 i~~~~ 103 (125)
T 3cew_A 99 IQVKA 103 (125)
T ss_dssp EEEET
T ss_pred EEcCC
Confidence 76543
No 61
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.30 E-value=9e-12 Score=94.65 Aligned_cols=77 Identities=16% Similarity=0.174 Sum_probs=59.6
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecC
Q 027725 93 SLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNS 172 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s 172 (219)
.+.++.++||+..++|+|+...|++||++|++++.+.+ ++ .+.|++||++++|+|..|.+.|.+++ +++++++..
T Consensus 44 ~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~~p 118 (134)
T 2o8q_A 44 HVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED--IG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIVSP 118 (134)
T ss_dssp EEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT--TE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEESS
T ss_pred EEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC--cE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEECC
Confidence 46666667888899999985699999999999998854 13 78999999999999999999998774 677777665
Q ss_pred CC
Q 027725 173 QL 174 (219)
Q Consensus 173 ~~ 174 (219)
..
T Consensus 119 ~~ 120 (134)
T 2o8q_A 119 AG 120 (134)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.28 E-value=2.2e-11 Score=89.77 Aligned_cols=73 Identities=15% Similarity=0.271 Sum_probs=63.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
++.+.++.++||...++|+|+ ..|++||++|++++.+.+ + ...+++||++++|+|..|.+.|.+ ++.+++++
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~v~ 110 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITIDQ---E--TYRVAEGQTIVMPAGIPHALYAVE--AFQMLLVV 110 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEETT---E--EEEEETTCEEEECTTSCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEECC---E--EEEECCCCEEEECCCCCEEEEECC--CceEEEEE
Confidence 568888999999999999998 799999999999998754 3 689999999999999999999987 46666654
Q ss_pred c
Q 027725 171 N 171 (219)
Q Consensus 171 ~ 171 (219)
-
T Consensus 111 ~ 111 (115)
T 1yhf_A 111 V 111 (115)
T ss_dssp E
T ss_pred E
Confidence 4
No 63
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.28 E-value=1.4e-11 Score=99.37 Aligned_cols=77 Identities=22% Similarity=0.200 Sum_probs=66.1
Q ss_pred ccceEEEEEEEcCCCcCC--CCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEE
Q 027725 89 TLGVSLSRIDYEAGGLNP--PHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASV 166 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~~~--pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~ 166 (219)
...+.+.+++++||+..+ +|+|+ ..|++||++|++++.+.+ + .+.|++||+++||++.+|.+.|.+++++ +
T Consensus 101 ~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~~~---~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~ 173 (192)
T 1y9q_A 101 DTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFFDE---Q--WHELQQGEHIRFFSDQPHGYAAVTEKAV-F 173 (192)
T ss_dssp TTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEETT---E--EEEECTTCEEEEECSSSEEEEESSSCEE-E
T ss_pred CCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEECC---E--EEEeCCCCEEEEcCCCCeEeECCCCCcE-E
Confidence 346788899999999765 77776 799999999999998854 3 7899999999999999999999999999 7
Q ss_pred EEEecC
Q 027725 167 ISAFNS 172 (219)
Q Consensus 167 l~~~~s 172 (219)
++++..
T Consensus 174 l~v~~~ 179 (192)
T 1y9q_A 174 QNIVAY 179 (192)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 776543
No 64
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.26 E-value=6.7e-12 Score=91.60 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=64.8
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.+.+.+++++||+...+|.|+...+++++++|++++.. .+|+.....+++||++++|+|..|+..|.|+++++++++-
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~--~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE 93 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe--CCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEE
Confidence 57899999999999999999865566677888888754 3444235689999999999999999999999999999873
No 65
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.26 E-value=1.4e-11 Score=104.41 Aligned_cols=78 Identities=13% Similarity=0.124 Sum_probs=66.9
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCC-CCEEEE
Q 027725 89 TLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGD-KPASVI 167 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~-~~a~~l 167 (219)
...+.+.++.++||+..+.|+|+...|++||++|++++.+.+. .+.|++||++++|+|..|++.|.|+ ++++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNN-----WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSC-----EEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 3457889999999999999999878999999999999987553 7899999999999999999999999 999988
Q ss_pred EEec
Q 027725 168 SAFN 171 (219)
Q Consensus 168 ~~~~ 171 (219)
...+
T Consensus 251 ~~~d 254 (261)
T 1rc6_A 251 YSKD 254 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7654
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.25 E-value=1.7e-11 Score=102.93 Aligned_cols=81 Identities=20% Similarity=0.223 Sum_probs=70.5
Q ss_pred eEEEEEEEcC-CCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 92 VSLSRIDYEA-GGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 92 is~~~~~l~p-g~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
+.+..+.++| |+..++|+|+ ..|++||++|++++.+.+. .+.|++||++++|+|.+|.+.|.|+++++++.++
T Consensus 145 ~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 218 (243)
T 3h7j_A 145 VEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVEGC-----TVEMKFGTAYFCEPREDHGAINRSEKESKSINIF 218 (243)
T ss_dssp EEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred eEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 4667788999 8888999998 6999999999999987653 7889999999999999999999999999999999
Q ss_pred cCCCCccc
Q 027725 171 NSQLPGTQ 178 (219)
Q Consensus 171 ~s~~pg~~ 178 (219)
.....++.
T Consensus 219 ~p~~~d~~ 226 (243)
T 3h7j_A 219 FPPRYNRA 226 (243)
T ss_dssp ESCSSCC-
T ss_pred cCChhccc
Confidence 86554443
No 67
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.22 E-value=8.6e-11 Score=86.73 Aligned_cols=71 Identities=13% Similarity=0.221 Sum_probs=61.1
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 92 VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 92 is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
+.+..+.++||...++|+|+ ..|++||++|++++.+.+ + .+.|++||++++|+|.+|.+.|. ++++++.+.
T Consensus 38 ~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i~~---~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~ 108 (114)
T 2ozj_A 38 VQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITFDD---Q--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQIT 108 (114)
T ss_dssp EEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEETT---E--EEEECTTCEEEECTTCCBEEEEE--EEEEEEEEE
T ss_pred ceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEECC---E--EEEecCCCEEEECCCCcEEEEeC--CCcEEEEEE
Confidence 46777788999999999998 799999999999998855 3 78999999999999999999996 466666654
No 68
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.21 E-value=1.4e-10 Score=98.90 Aligned_cols=76 Identities=13% Similarity=0.217 Sum_probs=68.0
Q ss_pred cceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCC-CCEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPP-HTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGD-KPASVI 167 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~p-H~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~-~~a~~l 167 (219)
..+.+.++.++||+..+. |+|+ ..|++||++|++++.+.+. .+.|++||++++|++.+|++.|.++ ++++++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l 253 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNLDNE-----WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYV 253 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEECSSSCEEEE
T ss_pred CCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCCEEEE
Confidence 367889999999999888 9997 7999999999999998653 7899999999999999999999999 889888
Q ss_pred EEec
Q 027725 168 SAFN 171 (219)
Q Consensus 168 ~~~~ 171 (219)
...+
T Consensus 254 ~~~~ 257 (274)
T 1sef_A 254 YSKD 257 (274)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7743
No 69
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.21 E-value=6.4e-11 Score=86.24 Aligned_cols=75 Identities=25% Similarity=0.320 Sum_probs=62.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEE-EEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEM-IFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~-~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
++.+.++.++||...++|+|+...|+ +||++|++++.+.+ ++ .+.|++||++++|+|..|.+.|.++ +.++.+
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~ 105 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG--DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVT 105 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG--GC--EEEECTTEEEEEETTSCEEEEESSS--EEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC--CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEE
Confidence 56888899999999999999854788 89999999998752 23 7899999999999999999999765 556666
Q ss_pred ec
Q 027725 170 FN 171 (219)
Q Consensus 170 ~~ 171 (219)
+.
T Consensus 106 ~~ 107 (110)
T 2q30_A 106 IA 107 (110)
T ss_dssp EE
T ss_pred EC
Confidence 54
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.17 E-value=9.5e-11 Score=101.78 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=69.1
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.+++.++.+.||+..++|||++..|++||++|++++.+.+ + .+.|++||++++|+|.+|.+.|.++ +++++.++
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~---~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~~ 118 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDG---E--RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSYT 118 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTCCEEEEECST-TEEEEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEECC---E--EEEECCCCEEEECCCCcEEEEECCC-CeEEEEEE
Confidence 5788899999999999999987899999999999998754 3 6899999999999999999999987 68888887
Q ss_pred cCCC
Q 027725 171 NSQL 174 (219)
Q Consensus 171 ~s~~ 174 (219)
....
T Consensus 119 ~p~~ 122 (337)
T 1y3t_A 119 MKGN 122 (337)
T ss_dssp ETTS
T ss_pred CCCC
Confidence 6553
No 71
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.16 E-value=1.7e-10 Score=98.37 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=81.2
Q ss_pred CCCcCcccccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEE
Q 027725 49 SANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGF 128 (219)
Q Consensus 49 p~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~ 128 (219)
.+..+++|++.+.+ |+ -.|..++....... + ..+++.+++++||+..+.|.|. ++|++||++|++++.+
T Consensus 37 ~avI~~~~iv~s~l--Pg----~~~~~~~vL~sP~~-G---~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l 105 (266)
T 4e2q_A 37 HALITPESHVYSPL--PD----WTNTLGAYLITPAT-G---SHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTN 105 (266)
T ss_dssp EEEECGGGCCCEEC--TT----SSSEEEEEEECGGG-T---CSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC
T ss_pred eEEECccceEEeeC--CC----CcCEEEEEEcCCCC-C---CcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEE
Confidence 34556677777755 32 23444444333222 2 3578999999999998888775 8999999999999998
Q ss_pred E-ccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCC
Q 027725 129 I-STADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLP 175 (219)
Q Consensus 129 ~-~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~p 175 (219)
. ++ .+.|++||.+++|++..|++.|. ++++++.+.....|
T Consensus 106 ~~g~-----~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k~y~~ 146 (266)
T 4e2q_A 106 TSSS-----SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFERRYEY 146 (266)
T ss_dssp --CC-----CEEECTTEEEEECTTCCCEEEES--SCEEEEEEEEECCC
T ss_pred CCCc-----EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEeEeee
Confidence 6 43 68999999999999999999995 68888887554433
No 72
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.16 E-value=2.3e-10 Score=101.08 Aligned_cols=82 Identities=12% Similarity=0.157 Sum_probs=65.5
Q ss_pred ceEEEEEEEcCCC-cCC--CCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEE
Q 027725 91 GVSLSRIDYEAGG-LNP--PHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVI 167 (219)
Q Consensus 91 gis~~~~~l~pg~-~~~--pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 167 (219)
.+++. ..+.|++ ..+ +|+|++..|++||++|++++.+.+.+|+...+.|++||++++|+|.+|++.|.++++ +++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l 124 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMT 124 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEE
Confidence 35666 4445554 455 899988899999999999999987445434889999999999999999999998876 777
Q ss_pred EEecCCC
Q 027725 168 SAFNSQL 174 (219)
Q Consensus 168 ~~~~s~~ 174 (219)
.++....
T Consensus 125 ~v~~p~~ 131 (350)
T 1juh_A 125 GVIVPGG 131 (350)
T ss_dssp EEEESSC
T ss_pred EEEcCcc
Confidence 7776543
No 73
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.15 E-value=1.3e-10 Score=87.52 Aligned_cols=74 Identities=20% Similarity=0.222 Sum_probs=61.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.+++..++++||.....| ...+|++||++|++++.+. ++ .+.|++||+++||+|..|.+.|.+ ++++++.+.
T Consensus 39 ~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~~---g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVSTD---GE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp CCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred CEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEE
Confidence 468888999999876555 4589999999999999884 34 789999999999999999998875 677777765
Q ss_pred cC
Q 027725 171 NS 172 (219)
Q Consensus 171 ~s 172 (219)
..
T Consensus 111 ~P 112 (119)
T 3lwc_A 111 YP 112 (119)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 74
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.15 E-value=1e-10 Score=100.30 Aligned_cols=76 Identities=17% Similarity=0.213 Sum_probs=67.4
Q ss_pred cceEEEEEEEcCCCcC--CCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEE
Q 027725 90 LGVSLSRIDYEAGGLN--PPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVI 167 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~--~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 167 (219)
..+++.+++++||+.. +.|.|. .+|++||++|++++.+.++ .+.|++||++++|+|..|.++|.|+++++++
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~g~-----~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQGQ-----VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEESSC-----EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 4678999999999876 557786 8999999999999998654 7899999999999999999999999999998
Q ss_pred EEec
Q 027725 168 SAFN 171 (219)
Q Consensus 168 ~~~~ 171 (219)
.+..
T Consensus 140 ~v~~ 143 (278)
T 1sq4_A 140 WIRK 143 (278)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8765
No 75
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.14 E-value=4.9e-10 Score=94.26 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=67.9
Q ss_pred ccceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEE
Q 027725 89 TLGVSLSRIDYEAGGLNPP-HTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVI 167 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~~~p-H~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 167 (219)
...+.+.+++++||+..+. |.|. .+|.+||++|++.+.+.+ + .+.|++||+++++++.+|+++|.|+++++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~-~ee~~~vLeG~~~~~~~~---~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHY-MEHGLLMLEGEGLYKLEE---N--YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCS-SCEEEEEEECEEEEEETT---E--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCCC-ceEEEEEEECEEEEEECC---E--EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 4568899999999999886 5565 799999999999998755 3 7899999999999999999999999999988
Q ss_pred EEec
Q 027725 168 SAFN 171 (219)
Q Consensus 168 ~~~~ 171 (219)
..-+
T Consensus 236 ~~kd 239 (246)
T 1sfn_A 236 LYKD 239 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8754
No 76
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.13 E-value=1.4e-10 Score=98.27 Aligned_cols=77 Identities=10% Similarity=0.098 Sum_probs=66.5
Q ss_pred ceEEEEEEEcCCCcCCCCCC-CCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTH-PRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H-~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.+.+.+++++||+....|.| +..+|++||++|++++.+.+ + .+.|++||++++|++.+|.+.|.++++++++++
T Consensus 58 ~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~---~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v 132 (261)
T 1rc6_A 58 SFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEG---K--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 132 (261)
T ss_dssp SSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETT---E--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred cEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECC---E--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 56788999999997766554 45689999999999999855 3 789999999999999999999999999999988
Q ss_pred ecC
Q 027725 170 FNS 172 (219)
Q Consensus 170 ~~s 172 (219)
...
T Consensus 133 ~~~ 135 (261)
T 1rc6_A 133 KRR 135 (261)
T ss_dssp EEE
T ss_pred Eec
Confidence 753
No 77
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.12 E-value=3.4e-10 Score=84.04 Aligned_cols=75 Identities=17% Similarity=0.316 Sum_probs=58.4
Q ss_pred ceEEEEEEEcCCCcCCCC--CCCCCcEEEEEEeeEEEEEEEccCCeEEE--EEEcCCCEEEECCCCeEEEEeCCCC-CEE
Q 027725 91 GVSLSRIDYEAGGLNPPH--THPRATEMIFVLEGELDVGFISTADKLIS--KTVKKGEIYVFPKALVHFQKNNGDK-PAS 165 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH--~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~--~~L~~GDv~~~P~g~~H~~~N~g~~-~a~ 165 (219)
++.+.++. .+|...+++ +|....|++||++|++++.+.+. . ..|++||+++||+|..|++.|.+++ +++
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~~-----~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~ 103 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGD-----TAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTV 103 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEETTC-----SSCEEECTTEEEEECTTCCEEEEEECSSSCEE
T ss_pred CEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEECCE-----EEEEEECCCCEEEECCCCcEEEEeCCCCCCEE
Confidence 55666664 445555442 33348999999999999998653 4 7899999999999999999999976 677
Q ss_pred EEEEec
Q 027725 166 VISAFN 171 (219)
Q Consensus 166 ~l~~~~ 171 (219)
+++++.
T Consensus 104 ~l~v~~ 109 (112)
T 2opk_A 104 WLAVHC 109 (112)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777765
No 78
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.11 E-value=1.8e-10 Score=96.53 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=65.2
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEE-ECCCCeEEEEeCCCCCEEEEEEec
Q 027725 93 SLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYV-FPKALVHFQKNNGDKPASVISAFN 171 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~-~P~g~~H~~~N~g~~~a~~l~~~~ 171 (219)
.+.+..++||...++|+|+ ..|++||++|++++.+.+ + ...|++||.++ +|+|..|.+.|.++++++++.+..
T Consensus 35 ~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~~~---~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~r 108 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTVGD---V--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIKR 108 (243)
T ss_dssp EEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEETT---E--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred EEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEECC---E--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEec
Confidence 5677789999999999998 899999999999998754 3 78999999995 999999999999999999888753
No 79
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.10 E-value=1.1e-10 Score=103.27 Aligned_cols=77 Identities=18% Similarity=0.331 Sum_probs=67.5
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..+.+....++||+..++|+|+ ..|++||++|++++..++ ++ ...+++||++++|+|..|.+.|.++++++++.+
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~--g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v 172 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVD--GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDG 172 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEET--TE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEEC--CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 3568889999999999999997 789999999999883333 34 789999999999999999999999999999887
Q ss_pred ec
Q 027725 170 FN 171 (219)
Q Consensus 170 ~~ 171 (219)
.+
T Consensus 173 ~d 174 (354)
T 2d40_A 173 LD 174 (354)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 80
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.09 E-value=2.2e-10 Score=87.97 Aligned_cols=72 Identities=17% Similarity=0.156 Sum_probs=60.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.+++.++.++|| ..|||...+|++||++|++++.+.+ + .+.|++||+++||+|..|.+.|. ++++++.+.
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~g---~--~~~l~~GD~i~~p~g~~h~~~~~--~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHEG---E--TMIAKAGDVMFIPKGSSIEFGTP--TSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEETT---E--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEECC---E--EEEECCCcEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 567888899999 4567766899999999999998753 4 67999999999999999999874 578887776
Q ss_pred cC
Q 027725 171 NS 172 (219)
Q Consensus 171 ~s 172 (219)
..
T Consensus 126 ~p 127 (133)
T 2pyt_A 126 WP 127 (133)
T ss_dssp ES
T ss_pred cC
Confidence 43
No 81
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.08 E-value=5.9e-10 Score=96.73 Aligned_cols=75 Identities=17% Similarity=0.237 Sum_probs=63.2
Q ss_pred EEEEEEcC-CCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecC
Q 027725 94 LSRIDYEA-GGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNS 172 (219)
Q Consensus 94 ~~~~~l~p-g~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s 172 (219)
...+.+.| |...++|+|+...|++||++|++++.+.+ + .+.|++||++++|++..|++.|.++ +++++.+++.
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~~---~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTDG---Q--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEECC---E--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 33445555 66788999986799999999999998854 3 7899999999999999999999988 8999998865
Q ss_pred CC
Q 027725 173 QL 174 (219)
Q Consensus 173 ~~ 174 (219)
..
T Consensus 293 ~~ 294 (337)
T 1y3t_A 293 GL 294 (337)
T ss_dssp ST
T ss_pred cc
Confidence 54
No 82
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.08 E-value=7.6e-10 Score=97.96 Aligned_cols=90 Identities=13% Similarity=0.042 Sum_probs=73.0
Q ss_pred CCcEEEEecc-cCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECC
Q 027725 72 VGSLVTAANV-EKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPK 150 (219)
Q Consensus 72 ~g~~~~~~~~-~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~ 150 (219)
.|+.++..+. .+++...+++ +....++||.+.++|+|+ .+|+.||++|++++.+.+ + +..+++||++++|+
T Consensus 249 ~G~~~~~~np~t~~~~~~ti~--~~~~~l~pG~~~~~H~h~-~~ev~~v~~G~g~~~v~~---~--~~~~~~GD~~~vP~ 320 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSMG--AFLQLLPKGFASRVARTT-DSTIYHVVEGSGQVIIGN---E--TFSFSAKDIFVVPT 320 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSCE--EEEEEECTTCBCCCBEES-SCEEEEEEEEEEEEEETT---E--EEEEETTCEEEECT
T ss_pred CCeEEEEeCCCcCCCCCCcce--eEEEEECCCCCCCceecC-CcEEEEEEeCeEEEEECC---E--EEEEcCCCEEEECC
Confidence 3556666663 3566777654 455699999999999998 569999999999999843 4 78999999999999
Q ss_pred CCeEEEEeCCCCCEEEEEEec
Q 027725 151 ALVHFQKNNGDKPASVISAFN 171 (219)
Q Consensus 151 g~~H~~~N~g~~~a~~l~~~~ 171 (219)
+..|.+.|. ++++++++.+
T Consensus 321 ~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 321 WHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp TCCEEEEEE--EEEEEEEEES
T ss_pred CCeEEEEeC--CCEEEEEEcC
Confidence 999999994 6788887743
No 83
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.08 E-value=2.8e-10 Score=97.11 Aligned_cols=78 Identities=12% Similarity=0.152 Sum_probs=66.7
Q ss_pred cceEEEEEEEcCCCcCCCCCC-CCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTH-PRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H-~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
..+.+.+++++||+....|.| +..+|++||++|++++.+.++ .+.|++||.++||++.+|.++|.++++++++.
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~ 134 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQE-----THELEAGGYAYFTPEMKMYLANAQEADTEVFL 134 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTSCCEEEESSSSCEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 356888999999987765544 457899999999999998654 78999999999999999999999999999998
Q ss_pred EecC
Q 027725 169 AFNS 172 (219)
Q Consensus 169 ~~~s 172 (219)
+...
T Consensus 135 v~~~ 138 (274)
T 1sef_A 135 YKKR 138 (274)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7643
No 84
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.07 E-value=2.6e-10 Score=83.27 Aligned_cols=69 Identities=26% Similarity=0.426 Sum_probs=53.9
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..++.+.||. .++|+|+...|++||++|++++.+.+ ++ .+.|++||++++|+|..|.+.|. ++++++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFAD--GG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETT--SC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECC--Cc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 3445667776 45999985599999999999998755 13 78999999999999999999995 45666554
No 85
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.06 E-value=5.6e-10 Score=92.70 Aligned_cols=73 Identities=23% Similarity=0.338 Sum_probs=63.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.+++.++.++||...++|+|+ ..|++||++|++++.+.+ + .+.+++||.+++|+|.+|++.|. .++++++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~g---~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVDG---K--PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEETT---E--EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEECC---E--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 468889999999999999998 799999999999998755 3 78999999999999999999993 4567766654
No 86
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.04 E-value=1e-09 Score=78.66 Aligned_cols=59 Identities=29% Similarity=0.501 Sum_probs=49.5
Q ss_pred CcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 103 GLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 103 ~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
+..++|+|+...|++||++|++++.+.+. ...+++||++++|+|..|.+.|.+ ++.++.
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~ 98 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFRDQ-----NITLQAGEMYVIPKGVEHKPMAKE--ECKIMI 98 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCBEEEEEE--EEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEECCE-----EEEEcCCCEEEECCCCeEeeEcCC--CCEEEE
Confidence 45889999855999999999999987553 789999999999999999999973 455443
No 87
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.03 E-value=7.5e-10 Score=87.22 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=58.7
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEe--eEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 92 VSLSRIDYEAGGLNPPHTHPRATEMIFVLE--GELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 92 is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~--G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
+++.++++ +...++|||+...|++||++ |++++.+.+ + .+.|++||++++|+|..|++.+ +++++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~idg---e--~~~l~~GD~v~IPpg~~H~i~g----~l~~L~I 115 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELNG---Q--SYPLTKLLAISIPPLVRHRIVG----EATIINI 115 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEETT---E--EEECCTTEEEEECTTCCEEEES----CEEEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEECC---E--EEEeCCCCEEEECCCCeEeeEC----CEEEEEE
Confidence 35555555 45568999987889999999 999999855 3 7899999999999999999973 6999998
Q ss_pred ecCC
Q 027725 170 FNSQ 173 (219)
Q Consensus 170 ~~s~ 173 (219)
++..
T Consensus 116 ~~Pp 119 (157)
T 4h7l_A 116 VSPP 119 (157)
T ss_dssp EESS
T ss_pred ECCC
Confidence 7754
No 88
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.01 E-value=1.9e-09 Score=92.34 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=69.4
Q ss_pred CccceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEE
Q 027725 88 NTLGVSLSRIDYEAGGLNPP-HTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASV 166 (219)
Q Consensus 88 ~~~gis~~~~~l~pg~~~~p-H~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~ 166 (219)
....+.+.+++++||+.++. |.|. -+|.+||++|++.+.+.+ + .+.|++||+++++.+..|+++|.|++++++
T Consensus 187 ~~~~~~~~~~~l~pG~~i~~~~~h~-~e~~~~il~G~~~~~~~~---~--~~~v~~GD~~~~~~~~~h~~~n~g~~~~~y 260 (278)
T 1sq4_A 187 MRHDMHVNIVNFEPGGVIPFAETHV-MEHGLYVLEGKAVYRLNQ---D--WVEVEAGDFMWLRAFCPQACYSGGPGRFRY 260 (278)
T ss_dssp TTCSEEEEEEEECSSSEESCCCCCS-EEEEEEEEECEEEEEETT---E--EEEEETTCEEEEEESCCEEEECCSSSCEEE
T ss_pred cCCCeEEEEEEECCCCCcCCCCCCC-ccEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCCEEEEcCCCCCEEE
Confidence 34578899999999999987 5554 689999999999998754 3 789999999999999999999999999999
Q ss_pred EEEecC
Q 027725 167 ISAFNS 172 (219)
Q Consensus 167 l~~~~s 172 (219)
+.+.+.
T Consensus 261 l~~~d~ 266 (278)
T 1sq4_A 261 LLYKDV 266 (278)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 988764
No 89
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.00 E-value=1.7e-09 Score=89.82 Aligned_cols=74 Identities=8% Similarity=0.061 Sum_probs=65.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
+..+.++.++||...++|.|+ .+|++||++|++++.+.+. .+.|++||++++|+|.+|.+.|. ++++++.+.
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~~~-----~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~i~ 107 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIENN-----KKTISNGDFLEITANHNYSIEAR--DNLKLIEIG 107 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEESSC-----EEEEETTEEEEECSSCCEEEEES--SSEEEEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEEC--CCcEEEEEE
Confidence 558889999999999999998 8999999999999998654 78999999999999999999985 468888775
Q ss_pred cC
Q 027725 171 NS 172 (219)
Q Consensus 171 ~s 172 (219)
..
T Consensus 108 ~~ 109 (227)
T 3rns_A 108 EK 109 (227)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 90
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.00 E-value=6.4e-10 Score=98.77 Aligned_cols=76 Identities=20% Similarity=0.268 Sum_probs=67.6
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEE-EEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELD-VGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~-v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
..+.+....++||...++|.|. .+|+.||++|++. +.+ +|+ ...+++||++++|+|..|.+.|.|+++++++.
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~v---dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVV---NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEE---CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 4678888999999999999998 6899999999995 544 344 78999999999999999999999999999998
Q ss_pred Eec
Q 027725 169 AFN 171 (219)
Q Consensus 169 ~~~ 171 (219)
+++
T Consensus 175 v~D 177 (368)
T 3nw4_A 175 GLD 177 (368)
T ss_dssp EEC
T ss_pred ecc
Confidence 765
No 91
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.00 E-value=4.7e-09 Score=94.09 Aligned_cols=75 Identities=17% Similarity=0.096 Sum_probs=66.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCC-CCCEEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNG-DKPASVISA 169 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g-~~~a~~l~~ 169 (219)
.+.+....++||...++|.|. .+|++||++|++++.+.+ + ...+++||++++|+|..|.+.|.| +++++++++
T Consensus 293 tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V~g---e--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 293 TMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIVGG---K--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp SCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEETT---E--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred eeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEECC---E--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 467788899999999999998 789999999999887744 4 789999999999999999999998 799999988
Q ss_pred ec
Q 027725 170 FN 171 (219)
Q Consensus 170 ~~ 171 (219)
.+
T Consensus 367 ~D 368 (394)
T 3bu7_A 367 ND 368 (394)
T ss_dssp ES
T ss_pred eC
Confidence 43
No 92
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.99 E-value=3.2e-09 Score=90.49 Aligned_cols=76 Identities=12% Similarity=0.173 Sum_probs=67.1
Q ss_pred ccceEEEEEEEcCCCcCCC-CCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEE
Q 027725 89 TLGVSLSRIDYEAGGLNPP-HTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVI 167 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~~~p-H~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 167 (219)
...+.+.+++++||+..+. |.|. .+|.+||++|++.+.+.+. .+.+++||+++++++.+|++.|.|+++++++
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~~~-----~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLGDN-----WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 4567888999999999996 7776 7899999999999987553 7899999999999999999999999999988
Q ss_pred EEe
Q 027725 168 SAF 170 (219)
Q Consensus 168 ~~~ 170 (219)
---
T Consensus 257 ~yk 259 (266)
T 4e2q_A 257 LYK 259 (266)
T ss_dssp EEE
T ss_pred EEc
Confidence 653
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.98 E-value=1.7e-09 Score=96.88 Aligned_cols=78 Identities=13% Similarity=0.142 Sum_probs=68.1
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEe-CCCCCEEEE
Q 027725 89 TLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKN-NGDKPASVI 167 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N-~g~~~a~~l 167 (219)
+..+.+....++||...++|.|. ..|+.||++|++.+..+ +|+ ...+++||++++|+|..|...| .|+++++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHA-ASALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEES-SCEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred CCeeEEEEEEECCCCCcCCccCC-cceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 44678899999999999999998 67999999999866333 345 7899999999999999999999 999999999
Q ss_pred EEec
Q 027725 168 SAFN 171 (219)
Q Consensus 168 ~~~~ 171 (219)
++.+
T Consensus 195 ~v~d 198 (394)
T 3bu7_A 195 DGLD 198 (394)
T ss_dssp EEEC
T ss_pred Eccc
Confidence 8653
No 94
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.97 E-value=1.7e-09 Score=84.78 Aligned_cols=72 Identities=15% Similarity=0.139 Sum_probs=58.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.+++...++. ++. .|||...+|+.||++|++++.+. |+ .+.|++||+++||+|..|++.|. ++++++++.
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~---g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIID---GR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 3566666666 333 45676789999999999999973 34 78999999999999999999997 678888876
Q ss_pred cC
Q 027725 171 NS 172 (219)
Q Consensus 171 ~s 172 (219)
..
T Consensus 135 ~P 136 (151)
T 4axo_A 135 YP 136 (151)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 95
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.96 E-value=2.2e-09 Score=88.43 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=67.4
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..+.+..+.++||...|.|.|+ .+|+.||++|++++.+.+ ++ ...+++||++++|+|..|..+ ++++|+.++.+
T Consensus 130 ~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~--g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePllalwv 203 (217)
T 4b29_A 130 QSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRN--AP--DLMLEPGQTRFHPANAPHAMT-TLTDPILTLVL 203 (217)
T ss_dssp SSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETT--SC--CEEECTTCEEEECTTCCEEEE-CCSSCEEEEEE
T ss_pred CeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECC--CC--EEecCCCCEEEcCCCCceeEE-ECCccEEEEEE
Confidence 4578888999999999999998 899999999999998862 33 679999999999999999998 58899987777
Q ss_pred ecC
Q 027725 170 FNS 172 (219)
Q Consensus 170 ~~s 172 (219)
...
T Consensus 204 W~G 206 (217)
T 4b29_A 204 WRG 206 (217)
T ss_dssp EES
T ss_pred EeC
Confidence 653
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.95 E-value=1.2e-08 Score=82.92 Aligned_cols=84 Identities=20% Similarity=0.267 Sum_probs=67.4
Q ss_pred EEEEEEEcCCCc----------CCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 027725 93 SLSRIDYEAGGL----------NPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDK 162 (219)
Q Consensus 93 s~~~~~l~pg~~----------~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~ 162 (219)
+.-.+.+.|+.+ .++|+|+ ..|+.||++|++.+.+.+.+++.+...+++||++++|+|..|++.+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~-~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHL-DEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECS-SCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECC-cceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 445566777752 3889998 59999999999999998755665667999999999999999999987777
Q ss_pred CEEEEEEecCCCCccc
Q 027725 163 PASVISAFNSQLPGTQ 178 (219)
Q Consensus 163 ~a~~l~~~~s~~pg~~ 178 (219)
..+.+-+|... |+..
T Consensus 154 ~~~airlF~~~-~~W~ 168 (191)
T 1vr3_A 154 YVKAMRLFVGE-PVWT 168 (191)
T ss_dssp CEEEEEEESSS-CCCC
T ss_pred CEEEEEEECCC-CCcc
Confidence 78888787753 4443
No 97
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.85 E-value=5e-09 Score=76.62 Aligned_cols=63 Identities=22% Similarity=0.246 Sum_probs=49.7
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEE
Q 027725 96 RIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPAS 165 (219)
Q Consensus 96 ~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~ 165 (219)
...+.||.. +.| |+ ..|++||++|++++.+.+ ++ ...|++||++++|+|.+|.+.|.++....
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~--g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTED--GK--KYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETT--CC--EEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECC--CC--EEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 456677764 245 65 899999999999998851 33 78999999999999999999997654333
No 98
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.85 E-value=8.9e-09 Score=86.49 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=62.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.+.+.+++++||+....|. .+|++||++|++++.+.++ .+.|++||.++||++.+|.+.|. ++++++.+.
T Consensus 49 ~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v~ 118 (246)
T 1sfn_A 49 RFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVGGE-----TRTLREYDYVYLPAGEKHMLTAK--TDARVSVFE 118 (246)
T ss_dssp SSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECSSC-----EEEECTTEEEEECTTCCCEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 5688899999999887774 7999999999999998654 78999999999999999999998 778877776
Q ss_pred cC
Q 027725 171 NS 172 (219)
Q Consensus 171 ~s 172 (219)
..
T Consensus 119 ~~ 120 (246)
T 1sfn_A 119 KP 120 (246)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 99
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.77 E-value=1.1e-08 Score=77.44 Aligned_cols=67 Identities=16% Similarity=0.224 Sum_probs=54.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCC
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKP 163 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~ 163 (219)
.+++...++.||... .|+|. .+|++||++|++++.+. +|+ ...|++||++++|+|..|.+.|.+...
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~~--~g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVDP--DGT--VHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEECT--TCC--EEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEEC--CCe--EEEECCCCEEEECCCCeEEEEECCcee
Confidence 357777788888765 47665 49999999999999862 344 679999999999999999999986543
No 100
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.77 E-value=4.7e-08 Score=70.39 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=62.5
Q ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCC-CCccchhch---hhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027725 136 ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQ-LPGTQSIAA---TLFTATPPVPDNVLTKAFQVGTKEIEKIK 211 (219)
Q Consensus 136 ~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~-~pg~~~~~~---~lf~~~~~~~~~vl~~af~~~~~~v~~l~ 211 (219)
+..+|++||+++||+|.+-...+.. .+.+++.-.+. ++....++. +++. .+|.++++.+|+++.+++++|+
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~---~l~~evla~aF~~s~ee~~~l~ 80 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR---QIPRQVSDLTFPGSGEEVEELL 80 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT---TSCHHHHHHHSSSCTHHHHHHT
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH---hCCHHHHHHHcCCCHHHHHHHH
Confidence 4678999999999999999999864 48888885544 777777754 7877 7999999999999999999998
Q ss_pred hhc
Q 027725 212 SKL 214 (219)
Q Consensus 212 ~~~ 214 (219)
..-
T Consensus 81 ~~q 83 (93)
T 1dgw_Y 81 ENQ 83 (93)
T ss_dssp TSC
T ss_pred hcC
Confidence 653
No 101
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.75 E-value=2.4e-08 Score=81.24 Aligned_cols=70 Identities=19% Similarity=0.259 Sum_probs=60.8
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEec
Q 027725 92 VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFN 171 (219)
Q Consensus 92 is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~ 171 (219)
..+..++++||+..+.|+|+ +.|+.||++|++. ++ ...+.+||++++|+|..|...+.+++.++++++.+
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSSCEEEEEEEC
T ss_pred cEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCCCEEEEEEec
Confidence 36678999999999999997 8999999999954 43 34799999999999999999987788899888764
No 102
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.72 E-value=5.2e-08 Score=76.89 Aligned_cols=75 Identities=15% Similarity=0.242 Sum_probs=62.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeC--CCCCEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNN--GDKPASVIS 168 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~--g~~~a~~l~ 168 (219)
+..+.+++++||+..++|.|+ ..|.+||++|++.+ ++.+ ..+++||.++.|+|..|...+. ++++++++.
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~---~e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~ 112 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHT-GTVIVYTVQGSWRY---KEHD----WVAHAGSVVYETASTRHTPQSAYAEGPDIITFN 112 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEES-SCEEEEEEESCEEE---TTSS----CCBCTTCEEEECSSEEECEEESSSSSSCEEEEE
T ss_pred CeEEEEEEECCCCCcccccCC-CCEEEEEEEeEEEE---eCCC----eEECCCeEEEECCCCcceeEeCCCCCCCEEEEE
Confidence 457888999999999999998 68999999999875 2222 3789999999999999999998 778898888
Q ss_pred EecCC
Q 027725 169 AFNSQ 173 (219)
Q Consensus 169 ~~~s~ 173 (219)
+.+..
T Consensus 113 ~~~G~ 117 (159)
T 3ebr_A 113 IVAGE 117 (159)
T ss_dssp EEESC
T ss_pred EecCc
Confidence 65543
No 103
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.71 E-value=2.6e-07 Score=73.76 Aligned_cols=85 Identities=20% Similarity=0.266 Sum_probs=72.7
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC-Ce---EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA-DK---LISKTVKKGEIYVFPKALVHFQKNNGDKPASV 166 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~-~~---~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~ 166 (219)
++++..+.+.||...++|-|..+..++.|++|+++..+.... ++ .....+++||++++|++.+|.+.|.++++++.
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 568899999999999999998777888899999998765422 31 13678999999999999999999999999999
Q ss_pred EEEecCCCC
Q 027725 167 ISAFNSQLP 175 (219)
Q Consensus 167 l~~~~s~~p 175 (219)
+.+|.....
T Consensus 148 lHvY~pp~~ 156 (171)
T 3eqe_A 148 LHVYSPPLE 156 (171)
T ss_dssp EEEEESCCC
T ss_pred EEEeCCCcc
Confidence 999987654
No 104
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.65 E-value=1.5e-07 Score=83.01 Aligned_cols=76 Identities=16% Similarity=0.162 Sum_probs=62.0
Q ss_pred ceEEEEEEEcC---CCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEE
Q 027725 91 GVSLSRIDYEA---GGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVI 167 (219)
Q Consensus 91 gis~~~~~l~p---g~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l 167 (219)
.+++.++++.+ |...+.|.|+ .+|++||++|++++.+.+. + .+.|++||++++|+|.+|.+.|.+.. +.++
T Consensus 248 ~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~g~--~--~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l 321 (350)
T 1juh_A 248 NYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIGDY--A--ATELGSGDVAFIPGGVEFKYYSEAYF-SKVL 321 (350)
T ss_dssp CEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEETTS--C--CEEECTTCEEEECTTCCEEEEESSSS-EEEE
T ss_pred EEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEECCe--E--EEEeCCCCEEEECCCCCEEEEecCCe-EEEE
Confidence 46778888877 3467888897 8999999999999998651 3 67999999999999999999997654 6666
Q ss_pred EEecC
Q 027725 168 SAFNS 172 (219)
Q Consensus 168 ~~~~s 172 (219)
.+.+.
T Consensus 322 ~~~~g 326 (350)
T 1juh_A 322 FVSSG 326 (350)
T ss_dssp EEEES
T ss_pred EEecC
Confidence 66553
No 105
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.65 E-value=1.8e-08 Score=81.11 Aligned_cols=70 Identities=20% Similarity=0.286 Sum_probs=56.6
Q ss_pred CCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCcc
Q 027725 105 NPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLPGT 177 (219)
Q Consensus 105 ~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~ 177 (219)
.++|+|+ ..|+.||++|++.+.+. .+++.+...+++||++++|+|..|++.+..+...+.+-+|... |+.
T Consensus 93 ~~~H~H~-~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w 162 (179)
T 1zrr_A 93 LNEHTHG-EDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGW 162 (179)
T ss_dssp HSCBEES-SCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGE
T ss_pred ccceECC-hheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCc
Confidence 5789998 59999999999999875 2456556779999999999999999988666667777777654 443
No 106
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.65 E-value=1.9e-08 Score=78.10 Aligned_cols=77 Identities=17% Similarity=0.055 Sum_probs=59.0
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEE-EEeCCCCCEEEEEEe
Q 027725 92 VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHF-QKNNGDKPASVISAF 170 (219)
Q Consensus 92 is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~-~~N~g~~~a~~l~~~ 170 (219)
-.+.+++++||+..++|+|+ ..|.+||++|+++....+ ......+++||+++.|+|..|. ..+ .+.++++.++
T Consensus 44 ~~~~~~~~~pG~~~p~H~H~-~~ee~~VL~G~~~~~~g~---~~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~l~~~ 117 (145)
T 2o1q_A 44 SWTAIFDCPAGSSFAAHVHV-GPGEYFLTKGKMDVRGGK---AAGGDTAIAPGYGYESANARHDKTEF--PVASEFYMSF 117 (145)
T ss_dssp EEEEEEEECTTEEECCEEES-SCEEEEEEEEEEEETTCG---GGTSEEEESSEEEEECTTCEESCCEE--EEEEEEEEEE
T ss_pred cEEEEEEECCCCCCCccCCC-CCEEEEEEEeEEEEcCCC---EecceEeCCCEEEEECcCCccCCeEC--CCCeEEEEEE
Confidence 35778999999999999998 577799999999864222 1002689999999999999999 443 3557777777
Q ss_pred cCCC
Q 027725 171 NSQL 174 (219)
Q Consensus 171 ~s~~ 174 (219)
+...
T Consensus 118 ~gp~ 121 (145)
T 2o1q_A 118 LGPL 121 (145)
T ss_dssp ESCE
T ss_pred CCcc
Confidence 6543
No 107
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.60 E-value=3.4e-07 Score=72.78 Aligned_cols=61 Identities=16% Similarity=0.288 Sum_probs=52.5
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCC
Q 027725 98 DYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNG 160 (219)
Q Consensus 98 ~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g 160 (219)
.-.|++....|.|+ .+|++||++|++.+.+.+ +|+.....|++||++++|+|+.|.-...+
T Consensus 41 v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d-~g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 41 VGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWV-DGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp ECSCBCCCCEEECS-SCEEEEEEESCEEEEEEE-TTEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred EcCCCcCccCcCCC-CceEEEEEeeEEEEEEEc-CCceeeEEECCCCEEEeCCCCCcCccccC
Confidence 34677889999886 899999999999999987 46556889999999999999999987654
No 108
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.60 E-value=1.2e-07 Score=75.77 Aligned_cols=81 Identities=17% Similarity=0.254 Sum_probs=62.0
Q ss_pred eEEEEEEEcCCCcCCCCCCCC------CcEEEEEEeeEEEEEEEccCCe----------------EEEEEEcCCCEEEEC
Q 027725 92 VSLSRIDYEAGGLNPPHTHPR------ATEMIFVLEGELDVGFISTADK----------------LISKTVKKGEIYVFP 149 (219)
Q Consensus 92 is~~~~~l~pg~~~~pH~H~~------a~E~~~Vl~G~~~v~~~~~~~~----------------~~~~~L~~GDv~~~P 149 (219)
...-++.+.||...|.|.|+. -.|-++|+.|.+++.+.+..-. .....|++||.+.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 566788999999999999998 8899999999999987432100 024689999999999
Q ss_pred CCCeEEEEeCCCCCEEEEEEecCCC
Q 027725 150 KALVHFQKNNGDKPASVISAFNSQL 174 (219)
Q Consensus 150 ~g~~H~~~N~g~~~a~~l~~~~s~~ 174 (219)
+|..|+++| +.+. +++.-+++.+
T Consensus 133 pg~~H~f~a-geeg-vli~EvSt~~ 155 (175)
T 2y0o_A 133 PNTKHWFQA-GEEG-AVVTEMSSTS 155 (175)
T ss_dssp TTCCEEEEE-EEEE-EEEEEEEECC
T ss_pred CCCcEEEEe-CCCC-EEEEEEeCCC
Confidence 999999999 4444 4444444433
No 109
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.56 E-value=9.8e-08 Score=75.80 Aligned_cols=74 Identities=18% Similarity=0.229 Sum_probs=59.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCC--CCCEEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNG--DKPASVIS 168 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g--~~~a~~l~ 168 (219)
+..+.+++++||+..++|+|+ ..|.+||++|++... . +. ...+++||.++.|+|..|...+.. ++++..+.
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~-~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---E-YP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---T-CT--TSCEETTEEEEECTTCEECEECCTTCSSCEEEEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---C-Cc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEE
Confidence 456888999999999999998 799999999998762 1 11 246899999999999999998864 33776666
Q ss_pred Eec
Q 027725 169 AFN 171 (219)
Q Consensus 169 ~~~ 171 (219)
+..
T Consensus 115 v~~ 117 (165)
T 3cjx_A 115 MLS 117 (165)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 110
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.49 E-value=5.5e-07 Score=79.92 Aligned_cols=88 Identities=16% Similarity=0.163 Sum_probs=69.5
Q ss_pred CcE-EEEeccc-CCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECC
Q 027725 73 GSL-VTAANVE-KIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPK 150 (219)
Q Consensus 73 g~~-~~~~~~~-~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~ 150 (219)
|.. +.-.+.. .-+.+.++ .+....++||....+|.|. ++++++|++|++++.+.+. ...+++||+|++|+
T Consensus 260 g~~~~~y~NP~tg~~~~pti--~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I~~~-----~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPTL--RCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVMNGE-----TTKLEKGDMFVVPS 331 (368)
T ss_dssp TEEEEECBCTTTSSBSSSSC--EEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEETTE-----EEEECTTCEEEECT
T ss_pred ceEEEEEeCCCCCCCcchhH--HhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEECCE-----EEEecCCCEEEECC
Confidence 544 4444422 33445554 5566789999999999998 7899999999999988653 78999999999999
Q ss_pred CCeEEEEeCCCCCEEEEEEe
Q 027725 151 ALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 151 g~~H~~~N~g~~~a~~l~~~ 170 (219)
+..|.+.|. +++.++.+-
T Consensus 332 w~~h~~~n~--~~a~Lf~~~ 349 (368)
T 3nw4_A 332 WVPWSLQAE--TQFDLFRFS 349 (368)
T ss_dssp TCCEEEEES--SSEEEEEEE
T ss_pred CCcEEEEeC--CCEEEEEEe
Confidence 999999996 678877663
No 111
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.49 E-value=4.9e-07 Score=78.98 Aligned_cols=84 Identities=23% Similarity=0.216 Sum_probs=67.1
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC-CeEEEEEEcC-C---CEEEECCCCeEEEEeCCCCCEEEE
Q 027725 93 SLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA-DKLISKTVKK-G---EIYVFPKALVHFQKNNGDKPASVI 167 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~-~~~~~~~L~~-G---Dv~~~P~g~~H~~~N~g~~~a~~l 167 (219)
.......+||.....|||....|.++|++|++.+.+.+.. ++ ...+.. | +.+++|+|..|.+.|.|+++++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDE--IIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCC--CEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCc--EEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 4555678999999999999899999999999998776543 35 345555 6 999999999999999998999888
Q ss_pred EEe----cCCCCccc
Q 027725 168 SAF----NSQLPGTQ 178 (219)
Q Consensus 168 ~~~----~s~~pg~~ 178 (219)
..- +.++|.++
T Consensus 351 ~~~~~~y~~~~~d~~ 365 (369)
T 3st7_A 351 MWVNEMFDPNQPDTY 365 (369)
T ss_dssp EEESSCCCSSSCCCE
T ss_pred EecCcccCCCCCccc
Confidence 753 44555543
No 112
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.48 E-value=2.5e-07 Score=72.50 Aligned_cols=109 Identities=13% Similarity=0.058 Sum_probs=73.3
Q ss_pred CCcCcccccccccCCCCcccCCCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEE
Q 027725 50 ANITADDFFFAGLAKPGVVNNSVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFI 129 (219)
Q Consensus 50 ~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~ 129 (219)
..+..++..|.-. |+.. ...|..++.+.. -| ..|-...+++++||+..++|+|+ ..|.+|||+|++....+
T Consensus 12 ~~v~~d~~~W~p~--P~~l-~~~Gv~~k~L~~--~~---e~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~~G 82 (153)
T 3bal_A 12 EYVKISDNNYVPF--PEAF-SDGGITWQLLHS--SP---ETSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVRGG 82 (153)
T ss_dssp EEEECCGGGCEEC--CGGG-EESCCEEEEEEE--ET---TTTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEETTC
T ss_pred eEEccccCceecC--CCcc-CCCCeEEEEEEE--CC---ccceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEecCc
Confidence 3456677777532 2110 034666665532 23 24668889999999999999999 78889999999877433
Q ss_pred ccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEec
Q 027725 130 STADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFN 171 (219)
Q Consensus 130 ~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~ 171 (219)
+. .....+++|+.++-|+|..|+... .++..+++.+..
T Consensus 83 d~---~~~~~~~aGsYv~ePpGs~H~p~~-~~~~~~~~~~~~ 120 (153)
T 3bal_A 83 EQ---EGGSTAYAPSYGFESSGALHGKTF-FPVESQFYMTFL 120 (153)
T ss_dssp GG---GTSEEEESSEEEEECTTCEESCCE-ESSCEEEEEEEE
T ss_pred cc---cCccccCCCeEEEcCCCCccccee-CCCCeEEEEEEE
Confidence 21 014678999999999999998533 233445555444
No 113
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.47 E-value=2e-06 Score=70.67 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=69.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEcc--CCeE----EEEEEcCCCEEEECC--CCeEEEEeC-CC
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST--ADKL----ISKTVKKGEIYVFPK--ALVHFQKNN-GD 161 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~--~~~~----~~~~L~~GDv~~~P~--g~~H~~~N~-g~ 161 (219)
.+++..+.+.||...++|-|. ...+++|++|+++..+... +|+. ....+++|+++++++ |.+|...|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~-~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHT-VWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCC-cceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 468888999999999999998 5999999999998877542 2321 257899999999999 999999999 68
Q ss_pred CCEEEEEEecCC
Q 027725 162 KPASVISAFNSQ 173 (219)
Q Consensus 162 ~~a~~l~~~~s~ 173 (219)
++++.+.+|...
T Consensus 157 ~~avsLHvY~~~ 168 (208)
T 2gm6_A 157 RVSISIHVYGAN 168 (208)
T ss_dssp SCEEEEEEESSC
T ss_pred CcEEEEEEEcCC
Confidence 899999998763
No 114
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.45 E-value=3.6e-07 Score=70.10 Aligned_cols=69 Identities=14% Similarity=0.235 Sum_probs=53.4
Q ss_pred CCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC-C--eEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEec
Q 027725 101 AGGLNPPHTHPRATEMIFVLEGELDVGFISTA-D--KLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFN 171 (219)
Q Consensus 101 pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~-~--~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~ 171 (219)
+++...+|.|+..+|+++|++|++++.+.+.. + +-....|++|+++++|+|+.|..... +.+.++-+=.
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e~~vLLiEp 109 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KDTKMMYVQD 109 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TTCEEEEEEE
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--CceEEEEEEe
Confidence 34567789999999999999999999987421 1 12368999999999999999998874 3455555433
No 115
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.39 E-value=2.8e-06 Score=65.23 Aligned_cols=58 Identities=14% Similarity=0.166 Sum_probs=49.0
Q ss_pred CCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCC-CCEEEEEE
Q 027725 106 PPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGD-KPASVISA 169 (219)
Q Consensus 106 ~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~-~~a~~l~~ 169 (219)
.||.|+ .-|++||++|++++.+.+ + .+.+++||++++|+|.+|...+.++ ++...+.+
T Consensus 32 ~p~~h~-~~~i~~v~~G~~~~~i~~---~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i 90 (164)
T 2arc_A 32 RPLGMK-GYILNLTIRGQGVVKNQG---R--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV 90 (164)
T ss_dssp ETTCCS-SEEEEEEEEECEEEEETT---E--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEE
T ss_pred cccCCC-ceEEEEEEEeEEEEEECC---E--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEE
Confidence 589997 799999999999998855 3 7899999999999999999988763 55665554
No 116
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.36 E-value=6.5e-06 Score=67.16 Aligned_cols=86 Identities=15% Similarity=0.220 Sum_probs=72.5
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEcc--CC-----eEEEEEEcCCCEEEE-CCCCeEEEEeCC-C
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST--AD-----KLISKTVKKGEIYVF-PKALVHFQKNNG-D 161 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~--~~-----~~~~~~L~~GDv~~~-P~g~~H~~~N~g-~ 161 (219)
.+++..+...||...++|-|..+..++.|++|+++....+. ++ ......+++||+.++ |++.+|...|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 36888899999999999999877899999999999887542 11 123678999999999 888899999999 7
Q ss_pred CCEEEEEEecCCCCc
Q 027725 162 KPASVISAFNSQLPG 176 (219)
Q Consensus 162 ~~a~~l~~~~s~~pg 176 (219)
++++-+-+|.....+
T Consensus 149 ~~avSlHvY~pp~~~ 163 (200)
T 3eln_A 149 EPAVSLHLYSPPFDT 163 (200)
T ss_dssp CCEEEEEEEESCCSE
T ss_pred CCEEEEEeCCCCccc
Confidence 899999999876654
No 117
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.36 E-value=1.6e-06 Score=71.97 Aligned_cols=74 Identities=19% Similarity=0.261 Sum_probs=60.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
+..+.+++++||+..++|+|+ ..|.+||++|++. +. ...+.+||.+..|+|..|.... ++.+.++..+
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~vk~ 109 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPTTSHVPGS--AEGCTIFVKL 109 (223)
T ss_dssp CEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET-----TEEEETTEEEEECTTCEECCEE--SSCEEEEEEE
T ss_pred ccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC-----CeEECCCeEEEeCCCCccccEe--CCCCEEEEEe
Confidence 445678999999999999998 7999999999975 22 3489999999999999999875 5678888877
Q ss_pred cCCCCc
Q 027725 171 NSQLPG 176 (219)
Q Consensus 171 ~s~~pg 176 (219)
..-.++
T Consensus 110 ~~~~~~ 115 (223)
T 3o14_A 110 WQFDPA 115 (223)
T ss_dssp SCSCTT
T ss_pred cCCCCC
Confidence 654444
No 118
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.35 E-value=2.9e-06 Score=67.35 Aligned_cols=59 Identities=17% Similarity=0.322 Sum_probs=50.2
Q ss_pred EcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC----eEEEEEEcCCCEEEECCCCeEEEEeC
Q 027725 99 YEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD----KLISKTVKKGEIYVFPKALVHFQKNN 159 (219)
Q Consensus 99 l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~----~~~~~~L~~GDv~~~P~g~~H~~~N~ 159 (219)
-.|+.....|.|+ .+|++|+++|++.+.+.+ +| +.....+++||++++|+|++|+-+..
T Consensus 41 gGPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d-~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 41 GGPNERTDYHINP-TPEWFYQKKGSMLLKVVD-ETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp CSSBCCSCEEECS-SCEEEEEEESCEEEEEEE-CSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cCCCcCCcCcCCC-CceEEEEEeCEEEEEEEc-CCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 3566778899665 899999999999999987 35 45688999999999999999998664
No 119
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.22 E-value=4.2e-06 Score=71.09 Aligned_cols=67 Identities=16% Similarity=0.292 Sum_probs=54.8
Q ss_pred cCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 100 EAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 100 ~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.|+.....| |...+|++|+++|.+.+.+.+ +|+.....+++||++++|+|++|.-+... ..+.+.+-
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~--et~gLviE 105 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFA--NTVGLVVE 105 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECT--TCEEEEEE
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccC--CeEEEEEe
Confidence 455567889 888999999999999999987 57667899999999999999999987743 34444443
No 120
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=98.01 E-value=0.00012 Score=60.15 Aligned_cols=84 Identities=18% Similarity=0.238 Sum_probs=69.7
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEcc--CCeEE----EEEEcCCCEEEECCC--CeEEEEeCC-C
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST--ADKLI----SKTVKKGEIYVFPKA--LVHFQKNNG-D 161 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~--~~~~~----~~~L~~GDv~~~P~g--~~H~~~N~g-~ 161 (219)
.+++..+...||...++|-|. +.-++.|++|+++-.+... +++.. ...+.+||+.++.++ .+|...|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 467888999999999999998 8999999999998877532 23211 378999999999987 899999984 7
Q ss_pred CCEEEEEEecCCCC
Q 027725 162 KPASVISAFNSQLP 175 (219)
Q Consensus 162 ~~a~~l~~~~s~~p 175 (219)
++++-+-+|.....
T Consensus 151 ~~avSLHvYg~pl~ 164 (211)
T 3uss_A 151 RTSISIHVYGANIG 164 (211)
T ss_dssp SCEEEEEEESSCGG
T ss_pred CCEEEEEEcCCCCC
Confidence 89999999986553
No 121
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.00 E-value=4.2e-05 Score=63.96 Aligned_cols=77 Identities=18% Similarity=0.246 Sum_probs=56.9
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
++++..+.+ .|..... .++ .+|++||++|++++.. .|+ ...+++||+++||+|..|.+...+.- ..+++.+
T Consensus 46 ~~~~G~~~~-~g~~~v~-~~p-~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~~~ 116 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVE-AYP-YTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPES-LWAFCAS 116 (238)
T ss_dssp SEEEEEEEE-CSEEEES-SCS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTE-EEEEEEE
T ss_pred CeEEEEEEe-ccccccc-cCC-CcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCe-EEEEEec
Confidence 567777887 5544332 233 5899999999999976 245 78999999999999999999876554 4566677
Q ss_pred c-CCCCc
Q 027725 171 N-SQLPG 176 (219)
Q Consensus 171 ~-s~~pg 176 (219)
. ...|.
T Consensus 117 ~~~~~p~ 123 (238)
T 3myx_A 117 TQASGPD 123 (238)
T ss_dssp CSCCSCC
T ss_pred cCCCCCC
Confidence 7 34443
No 122
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.81 E-value=0.00011 Score=56.68 Aligned_cols=74 Identities=12% Similarity=0.099 Sum_probs=57.9
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCC-EEEECCCCeEEEEeCCCCCEEEEEEecC
Q 027725 97 IDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGE-IYVFPKALVHFQKNNGDKPASVISAFNS 172 (219)
Q Consensus 97 ~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GD-v~~~P~g~~H~~~N~g~~~a~~l~~~~s 172 (219)
...+||....+|.|....|++++++|++.+.+.+. .......|.+.. .+.+|+|.+|.+.+.++. ++++.+-+.
T Consensus 40 ~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg-~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~-avllvlas~ 114 (141)
T 2pa7_A 40 FDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG-NIIQEITLDSPAVGLYVGPAVWHEMHDFSSD-CVMMVLASD 114 (141)
T ss_dssp ESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS-SCEEEEEECCTTEEEEECTTCEEEEECCCTT-CEEEEEESS
T ss_pred EecCCCCEECcCcCCCceEEEEEEccEEEEEEECC-cEEEEEEECCCCcEEEeCCCEEEEEEEcCCC-eEEEEECCC
Confidence 34568889999999999999999999999998653 222356675554 599999999999998775 776665443
No 123
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.77 E-value=0.00027 Score=56.28 Aligned_cols=76 Identities=17% Similarity=0.147 Sum_probs=62.1
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC------CeEEEEEEc---CCCEEEECCCCeEEEEeCCCCCEEEE
Q 027725 97 IDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA------DKLISKTVK---KGEIYVFPKALVHFQKNNGDKPASVI 167 (219)
Q Consensus 97 ~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~------~~~~~~~L~---~GDv~~~P~g~~H~~~N~g~~~a~~l 167 (219)
....+|..+..|+|....++++|++|++...+++-. |+.....|. ....+++|+|..|.+.+.++++++++
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~l 137 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVA 137 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEE
Confidence 345788899999998789999999999999987632 455678888 56799999999999999988777776
Q ss_pred EEecC
Q 027725 168 SAFNS 172 (219)
Q Consensus 168 ~~~~s 172 (219)
...+.
T Consensus 138 y~~s~ 142 (174)
T 3ejk_A 138 NCTDI 142 (174)
T ss_dssp EEESS
T ss_pred EECCC
Confidence 65443
No 124
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.58 E-value=0.00018 Score=53.66 Aligned_cols=63 Identities=17% Similarity=0.084 Sum_probs=47.0
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCC
Q 027725 93 SLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGD 161 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~ 161 (219)
....-...||...-. ++. .+|++||++|++++... +|. ..++++||+++||+|....+.-...
T Consensus 43 ~~GvWe~tPG~~~~~-~~~-~~E~~~iLeG~~~lt~d--dG~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 43 IVAVWMAEPGIYNYA-GRD-LEETFVVVEGEALYSQA--DAD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp EEEEEEECSEEEEEC-CCS-EEEEEEEEECCEEEEET--TCC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred EEEEEecCCceeECe-eCC-CcEEEEEEEeEEEEEeC--CCe--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 344447788875532 233 45999999999999764 355 6799999999999999998865433
No 125
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.33 E-value=0.0044 Score=49.02 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=83.5
Q ss_pred CCCcEEEEecccCCC-CCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeE-EEEEEEccCCeEEEEE----EcCCC
Q 027725 71 SVGSLVTAANVEKIP-GLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGE-LDVGFISTADKLISKT----VKKGE 144 (219)
Q Consensus 71 ~~g~~~~~~~~~~~P-~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~-~~v~~~~~~~~~~~~~----L~~GD 144 (219)
+-|+..+....+.-+ .-.....+....-+.+|....+|... ++|+.+...|. +++.+..++|+..... +.+|+
T Consensus 27 PEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge 105 (170)
T 1yud_A 27 VEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGE 105 (170)
T ss_dssp TTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTE
T ss_pred CCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCc
Confidence 456666655543210 11222346667778899877777775 99999999999 4888888777754544 56788
Q ss_pred E--EEECCCCeEEEEeCCCCCEEEEEEecCCCCccchhchhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027725 145 I--YVFPKALVHFQKNNGDKPASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIK 211 (219)
Q Consensus 145 v--~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg~~~~~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~ 211 (219)
. ++||+|..+..++.+.+.+.+-|+. .||+..-...+ .+.+.|.+.|.--++.|++|.
T Consensus 106 ~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 106 RPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDDFEL------FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp ESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGGCCB------CBHHHHHHSCCTTHHHHTTSC
T ss_pred eeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCceEE------cCHHHHHhHCchhHHHHHHhh
Confidence 8 9999999999998732444444443 34443322222 235555555665566666553
No 126
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.32 E-value=0.0011 Score=55.19 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=48.6
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeC
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNN 159 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~ 159 (219)
.++.......||.....++ ..+|++||++|++++.-. +|+ ..++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~--~~~E~~~ILeG~v~lt~~--~G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPH--KIHELMNLIEGRVVLSLE--NGS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEEC--SSCEEEEEEECCEEEEET--TSC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcC--CCCEEEEEEEeEEEEEeC--CCC--EEEECCCCEEEECCCCEEEEEEC
Confidence 3566667778877444332 368999999999998742 455 68999999999999999888765
No 127
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.21 E-value=0.0015 Score=54.48 Aligned_cols=74 Identities=9% Similarity=-0.018 Sum_probs=53.2
Q ss_pred ceEEEEEEEcCCC--cCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeC--CCCCEEE
Q 027725 91 GVSLSRIDYEAGG--LNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNN--GDKPASV 166 (219)
Q Consensus 91 gis~~~~~l~pg~--~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~--g~~~a~~ 166 (219)
++-+....+.... ...+|||. .-|++||++|++. .+.+.... .+.+++||++++|+|..|.+... ++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~~~~~~--~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~ 81 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LIDKNCLV--SYEINSSSIILLKKNSIQRFSLTSLSDENINV 81 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEETTTTE--EEEECTTEEEEECTTCEEEEEEEECCSSCEEE
T ss_pred hhhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EECCccce--eEEEcCCCEEEEcCCCceeeccccCCCcceEE
Confidence 3445555665554 35789997 7999999999999 76542111 46899999999999999998765 3344444
Q ss_pred EE
Q 027725 167 IS 168 (219)
Q Consensus 167 l~ 168 (219)
+.
T Consensus 82 ~~ 83 (276)
T 3gbg_A 82 SV 83 (276)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.14 E-value=0.00064 Score=56.15 Aligned_cols=64 Identities=14% Similarity=0.267 Sum_probs=52.6
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 93 SLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.+..++++||...++|.| .+.|+ +||+|++. +. ...+.+|+.+-.|.|..|.... |++.+.++.
T Consensus 147 ~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~-----~~~~~~GsWlR~P~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 147 TVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VN-----DEVLGRNAWLRLPEGEALSATA-GARGAKIWM 210 (223)
T ss_dssp EEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ET-----TEEECTTEEEEECTTCCEEEEE-EEEEEEEEE
T ss_pred EEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----EC-----CceECCCeEEEeCCCCccCcEE-CCCCeEEEE
Confidence 566788999999999999 68996 99999975 22 2479999999999999999877 666676554
No 129
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=96.93 E-value=0.0045 Score=52.11 Aligned_cols=73 Identities=18% Similarity=0.314 Sum_probs=56.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECC--CCeEEEEeCCC-CCEEEEEEe
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPK--ALVHFQKNNGD-KPASVISAF 170 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~--g~~H~~~N~g~-~~a~~l~~~ 170 (219)
+....+.||.-.++|-|..-+.+.||++|+++.. +..|. ...+++||+-++-+ |+.|...|..+ +++.++.+.
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlW 141 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLW 141 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEE
Confidence 4556789998889999974444789999998874 44455 67899999999955 67999999764 677777653
No 130
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.93 E-value=0.0067 Score=48.61 Aligned_cols=69 Identities=16% Similarity=0.153 Sum_probs=53.5
Q ss_pred cCCCcCCCCCC--CCCcEEEEEEeeEEE-EEEEccC-----CeEEEEEEcC--CCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 100 EAGGLNPPHTH--PRATEMIFVLEGELD-VGFISTA-----DKLISKTVKK--GEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 100 ~pg~~~~pH~H--~~a~E~~~Vl~G~~~-v~~~~~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.+|..+..|+| ....++++|++|++. +.+.... |+.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 47889999999 668999999999974 4444332 4667788865 58999999999999998776 555443
No 131
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.93 E-value=0.0035 Score=50.80 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=57.9
Q ss_pred cCCCcCCCCCCCCCcEEEEEEe-eEEEEEEEccC-----CeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecC-
Q 027725 100 EAGGLNPPHTHPRATEMIFVLE-GELDVGFISTA-----DKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNS- 172 (219)
Q Consensus 100 ~pg~~~~pH~H~~a~E~~~Vl~-G~~~v~~~~~~-----~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s- 172 (219)
.+|.++..|.|+ ..++++|++ |++...+++-. |+.....|..+..++||+|..|.+.+.++. ++++...+.
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~s~~ 145 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLVNDY 145 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEESSC
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEECCCc
Confidence 678889999996 789999999 99655455433 567788999999999999999999998765 554443333
Q ss_pred CCCcc
Q 027725 173 QLPGT 177 (219)
Q Consensus 173 ~~pg~ 177 (219)
.+|+.
T Consensus 146 Y~p~~ 150 (197)
T 1nxm_A 146 WALEL 150 (197)
T ss_dssp CCGGG
T ss_pred cChhh
Confidence 34443
No 132
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=96.92 E-value=0.0021 Score=53.25 Aligned_cols=76 Identities=17% Similarity=0.099 Sum_probs=55.7
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEee---EEEEEEEccC-------------CeEE------EEEEcCCCEEEECC
Q 027725 93 SLSRIDYEAGGLNPPHTHPRATEMIFVLEG---ELDVGFISTA-------------DKLI------SKTVKKGEIYVFPK 150 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G---~~~v~~~~~~-------------~~~~------~~~L~~GDv~~~P~ 150 (219)
.--.+.+.+|...|.|.|+.-.|-+++.-| .+++...+++ |+.+ ..+|++|+.+.+++
T Consensus 107 aeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~P 186 (246)
T 3kmh_A 107 AEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPP 186 (246)
T ss_dssp EEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECT
T ss_pred eeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCC
Confidence 445567899999999999999999999998 4454444322 2111 34899999999999
Q ss_pred CCeEEEEeCCCC-CEEEEE
Q 027725 151 ALVHFQKNNGDK-PASVIS 168 (219)
Q Consensus 151 g~~H~~~N~g~~-~a~~l~ 168 (219)
|+.|+++..+.. ++.+-.
T Consensus 187 g~~H~F~ae~g~G~vligE 205 (246)
T 3kmh_A 187 GLYHSFWAEAGFGDVLVGE 205 (246)
T ss_dssp TEEEEEEECTTSCCEEEEE
T ss_pred CCEEEEEecCCCccEEEEE
Confidence 999999986542 444433
No 133
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.87 E-value=0.0083 Score=48.04 Aligned_cols=69 Identities=13% Similarity=0.093 Sum_probs=53.5
Q ss_pred cCCCcCCCCCC--CCCcEEEEEEeeEEE-EEEEccC-----CeEEEEEEcC--CCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 100 EAGGLNPPHTH--PRATEMIFVLEGELD-VGFISTA-----DKLISKTVKK--GEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 100 ~pg~~~~pH~H--~~a~E~~~Vl~G~~~-v~~~~~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
.+|..+..|+| ....++++|++|++. +.+.... |+.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 47889999999 657899999999974 4444332 4667778876 58999999999999998776 555543
No 134
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.75 E-value=0.0079 Score=48.97 Aligned_cols=68 Identities=18% Similarity=0.175 Sum_probs=52.9
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEeeEEEEEEEc-c-----CCeEEEEEEcC--CCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 100 EAGGLNPPHTHP---RATEMIFVLEGELDVGFIS-T-----ADKLISKTVKK--GEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 100 ~pg~~~~pH~H~---~a~E~~~Vl~G~~~v~~~~-~-----~~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.+|.++..|+|. ...++++|++|++.-.+++ . -|+.....|.+ +..++||+|..|-+.+.++. +.++.
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEEE
Confidence 688899999995 3689999999996554444 2 24667788875 78999999999999998865 44443
No 135
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.71 E-value=0.014 Score=47.13 Aligned_cols=69 Identities=14% Similarity=0.167 Sum_probs=52.6
Q ss_pred EcCCCcCCCCCCCC---CcEEEEEEeeEEEEEEEc-cC-----CeEEEEEEcC--CCEEEECCCCeEEEEeCCCCCEEEE
Q 027725 99 YEAGGLNPPHTHPR---ATEMIFVLEGELDVGFIS-TA-----DKLISKTVKK--GEIYVFPKALVHFQKNNGDKPASVI 167 (219)
Q Consensus 99 l~pg~~~~pH~H~~---a~E~~~Vl~G~~~v~~~~-~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l 167 (219)
-.+|.++..|+|.. ..++++|++|++...+++ .. |+.....|.+ +..++||+|..|-+.+.++. +.++
T Consensus 72 s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~l 150 (196)
T 1wlt_A 72 SRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIY 150 (196)
T ss_dssp ECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEE
T ss_pred CCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 35788899999964 589999999999444443 22 4567788875 68999999999999998774 4444
Q ss_pred E
Q 027725 168 S 168 (219)
Q Consensus 168 ~ 168 (219)
.
T Consensus 151 y 151 (196)
T 1wlt_A 151 F 151 (196)
T ss_dssp E
T ss_pred E
Confidence 3
No 136
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.68 E-value=0.013 Score=44.15 Aligned_cols=66 Identities=18% Similarity=0.193 Sum_probs=51.7
Q ss_pred cCCCcCCCC----CCCCCcEEEEEEeeEEEEEEEccCCe---EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEE
Q 027725 100 EAGGLNPPH----THPRATEMIFVLEGELDVGFISTADK---LISKTVKKGEIYVFPKALVHFQKNNGDKPASV 166 (219)
Q Consensus 100 ~pg~~~~pH----~H~~a~E~~~Vl~G~~~v~~~~~~~~---~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~ 166 (219)
-|++..+.| +|+..-+.+.|++|++++...+.+|. .......+|+..++|++..|.++-.++ ++.+
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f 94 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYF 94 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEE
Confidence 366678889 48867799999999999987665553 235667999999999999999987554 5555
No 137
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.68 E-value=0.011 Score=51.58 Aligned_cols=73 Identities=21% Similarity=0.231 Sum_probs=54.6
Q ss_pred EEEcC-CCcCCCCCCCCCcEEEEEEeeEEEEEEE-ccC---------------------------------CeEEEEEEc
Q 027725 97 IDYEA-GGLNPPHTHPRATEMIFVLEGELDVGFI-STA---------------------------------DKLISKTVK 141 (219)
Q Consensus 97 ~~l~p-g~~~~pH~H~~a~E~~~Vl~G~~~v~~~-~~~---------------------------------~~~~~~~L~ 141 (219)
+-+.| |+..++|+.+ .+-++..+.|+=++.+. .+. ......+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44455 7788999986 67888888999888887 322 012567999
Q ss_pred CCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 142 KGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 142 ~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
+||++++|+|..|+.++.++++..-+++-
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 99999999999999998754455555443
No 138
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.52 E-value=0.022 Score=45.54 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=52.2
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEeeEEE-EEEEccC-----CeEEEEEEcC--CCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 100 EAGGLNPPHTHP---RATEMIFVLEGELD-VGFISTA-----DKLISKTVKK--GEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 100 ~pg~~~~pH~H~---~a~E~~~Vl~G~~~-v~~~~~~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.+|..+..|+|. ...++++|++|++. +.+.... |+.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 478899999995 57899999999974 4444322 4566778866 58999999999999998776 44444
No 139
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.49 E-value=0.016 Score=48.35 Aligned_cols=73 Identities=19% Similarity=0.285 Sum_probs=56.7
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEE--CCCCeEEEEeCCC-CCEEEEEEe
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVF--PKALVHFQKNNGD-KPASVISAF 170 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~--P~g~~H~~~N~g~-~~a~~l~~~ 170 (219)
+....+.||.-.++|-|..-+.+.||++|+++.. +..|. ...+++||+-++ -+|..|.-.|..+ +++.++.+.
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlW 118 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIW 118 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEE
Confidence 4456788988889999975555999999998874 44455 578999999999 5568999999764 677777654
No 140
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.49 E-value=0.026 Score=45.92 Aligned_cols=68 Identities=12% Similarity=0.071 Sum_probs=52.4
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEeeEEEEEEEcc-C-----CeEEEEEEcC--CCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 100 EAGGLNPPHTHPR---ATEMIFVLEGELDVGFIST-A-----DKLISKTVKK--GEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 100 ~pg~~~~pH~H~~---a~E~~~Vl~G~~~v~~~~~-~-----~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.+|.+...|+|.. ..++++|++|++.-.+++- . |+.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5788899999953 5899999999975444442 1 4567788876 47999999999999998876 44444
No 141
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.44 E-value=0.024 Score=46.47 Aligned_cols=68 Identities=10% Similarity=-0.015 Sum_probs=51.9
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEeeEEE-EEEEccC-----CeEEEEEEcCC--CEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 100 EAGGLNPPHTHPR---ATEMIFVLEGELD-VGFISTA-----DKLISKTVKKG--EIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 100 ~pg~~~~pH~H~~---a~E~~~Vl~G~~~-v~~~~~~-----~~~~~~~L~~G--Dv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.+|.++..|+|.. ..++++|++|++. +.+.... |+.....|.+. ..++||+|..|-+.+.++. ++++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4788899999964 5899999999974 4443322 45677888764 7999999999999998876 44443
No 142
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.41 E-value=0.036 Score=45.70 Aligned_cols=68 Identities=15% Similarity=0.088 Sum_probs=52.1
Q ss_pred cCCCcCCCCCCCC---CcEEEEEEeeEEEEEEEcc------CCeEEEEEEcC--CCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 100 EAGGLNPPHTHPR---ATEMIFVLEGELDVGFIST------ADKLISKTVKK--GEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 100 ~pg~~~~pH~H~~---a~E~~~Vl~G~~~v~~~~~------~~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.+|.+...|+|.. ..++++|++|++.-.+++- .|+.....|.+ +..++||+|..|-+.+.++. ++++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 5788899999963 5899999999975444432 14566778876 47999999999999999876 44443
No 143
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.30 E-value=0.0082 Score=48.43 Aligned_cols=65 Identities=17% Similarity=0.315 Sum_probs=48.9
Q ss_pred EEEEcCC-CcCCCCCCCCCcEEEEEEeeEEEEEEEccCC----------------------------------eEEEEEE
Q 027725 96 RIDYEAG-GLNPPHTHPRATEMIFVLEGELDVGFISTAD----------------------------------KLISKTV 140 (219)
Q Consensus 96 ~~~l~pg-~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~----------------------------------~~~~~~L 140 (219)
.+-+.++ +..+.|+.+ ..-++.+++|+=++.+..+.. +....+|
T Consensus 127 ~~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred EEEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 3445554 456678776 577888999999998865420 2246789
Q ss_pred cCCCEEEECCCCeEEEEeCCC
Q 027725 141 KKGEIYVFPKALVHFQKNNGD 161 (219)
Q Consensus 141 ~~GDv~~~P~g~~H~~~N~g~ 161 (219)
++||+++||+|..|..+|.+.
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp CTTCEEEECTTCEEEEEESSS
T ss_pred CCCCEEEeCCCCcEEEEECCC
Confidence 999999999999999999753
No 144
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.29 E-value=0.048 Score=44.16 Aligned_cols=77 Identities=9% Similarity=-0.003 Sum_probs=56.6
Q ss_pred cCCCcCCCCCCC---CCcEEEEEEeeEEEEEEEcc------CCeEEEEEEcC--CCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 100 EAGGLNPPHTHP---RATEMIFVLEGELDVGFIST------ADKLISKTVKK--GEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 100 ~pg~~~~pH~H~---~a~E~~~Vl~G~~~v~~~~~------~~~~~~~~L~~--GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
.+|.+..+|+|. ....+++|++|++.-.+++- -|+.....|.+ +..++||+|..|-+.+.++....++-
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~ 131 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFL 131 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEe
Confidence 678889999984 47899999999977666652 25667778876 67999999999999998765433333
Q ss_pred EecCCCCc
Q 027725 169 AFNSQLPG 176 (219)
Q Consensus 169 ~~~s~~pg 176 (219)
+-+..+|+
T Consensus 132 ~t~~Y~p~ 139 (201)
T 4hn1_A 132 CSSGYAPA 139 (201)
T ss_dssp ESSCCCGG
T ss_pred CCCCcChh
Confidence 32223444
No 145
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.13 E-value=0.019 Score=48.17 Aligned_cols=77 Identities=23% Similarity=0.281 Sum_probs=60.4
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEE-EEeCCCCCEEEE
Q 027725 89 TLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHF-QKNNGDKPASVI 167 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~-~~N~g~~~a~~l 167 (219)
.-|-+-.++.++|+...|+-.|.--.| +||++|++.++ ...|.++...++|+|+.-- +.-.|.+++.++
T Consensus 88 d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G---------~~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL 157 (303)
T 2qdr_A 88 DSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG---------EWQLNKHSYSFIPAGVRIGSWKVLGGEEAEIL 157 (303)
T ss_dssp TTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET---------TEEECTTEEEEECTTCCBCCEEEETTSCEEEE
T ss_pred CCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC---------CEEecCCceEEecCCCccCceeecCCCCcEEE
Confidence 447788999999999999988875567 99999998763 2489999999999999543 334578888888
Q ss_pred EEecCCCC
Q 027725 168 SAFNSQLP 175 (219)
Q Consensus 168 ~~~~s~~p 175 (219)
.+.+...|
T Consensus 158 ~fe~g~~p 165 (303)
T 2qdr_A 158 WMENGSVP 165 (303)
T ss_dssp EEECSSSC
T ss_pred EEecCCcc
Confidence 87554443
No 146
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=95.85 E-value=0.032 Score=48.79 Aligned_cols=73 Identities=11% Similarity=0.143 Sum_probs=54.7
Q ss_pred EEEc-CCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC-----------------------------------eEEEEEE
Q 027725 97 IDYE-AGGLNPPHTHPRATEMIFVLEGELDVGFISTAD-----------------------------------KLISKTV 140 (219)
Q Consensus 97 ~~l~-pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~-----------------------------------~~~~~~L 140 (219)
+-+. +|+..++|+.+ ..-+..+++|+=++.+..+.. +....+|
T Consensus 187 l~iG~~gs~t~~H~D~-~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGE-QQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCS-EEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECC-hhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 4454 55677899887 478888999998888764310 3467899
Q ss_pred cCCCEEEECCCCeEEEEeCCC-CCEEEEEEe
Q 027725 141 KKGEIYVFPKALVHFQKNNGD-KPASVISAF 170 (219)
Q Consensus 141 ~~GDv~~~P~g~~H~~~N~g~-~~a~~l~~~ 170 (219)
++||++++|+|..|...|.++ .....+...
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 999999999999999999873 445555543
No 147
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.55 E-value=0.048 Score=49.26 Aligned_cols=62 Identities=23% Similarity=0.385 Sum_probs=47.5
Q ss_pred EEcCCC-cC-CCCCCCCCcEEEEEEeeEEEEEEEccCC----------------eEEEEEEcCCCEEEECCCCeEEEEeC
Q 027725 98 DYEAGG-LN-PPHTHPRATEMIFVLEGELDVGFISTAD----------------KLISKTVKKGEIYVFPKALVHFQKNN 159 (219)
Q Consensus 98 ~l~pg~-~~-~pH~H~~a~E~~~Vl~G~~~v~~~~~~~----------------~~~~~~L~~GDv~~~P~g~~H~~~N~ 159 (219)
-+.|++ .. ++|+-. .+-+++.++|+=++.+..+.. .....+|++||++++|+|.+|+.++.
T Consensus 144 y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~ 222 (442)
T 2xdv_A 144 YITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTP 222 (442)
T ss_dssp EEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECC
T ss_pred EECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEec
Confidence 444554 43 699975 677888889998888766531 12468999999999999999999887
Q ss_pred C
Q 027725 160 G 160 (219)
Q Consensus 160 g 160 (219)
+
T Consensus 223 ~ 223 (442)
T 2xdv_A 223 A 223 (442)
T ss_dssp S
T ss_pred C
Confidence 5
No 148
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.52 E-value=0.15 Score=46.08 Aligned_cols=67 Identities=15% Similarity=0.106 Sum_probs=48.7
Q ss_pred CCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE--EecC--CCCccchh
Q 027725 107 PHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS--AFNS--QLPGTQSI 180 (219)
Q Consensus 107 pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~--~~~s--~~pg~~~~ 180 (219)
.-...+++|++++.+|++.+.- +-| ...+++||+++||+|+.+++.-.+ +++.+. .+.. +-|....+
T Consensus 172 ~f~NaDGD~Livpq~G~l~i~T--EfG---~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~E~~g~~f~LP~lGpi 242 (471)
T 1eyb_A 172 CFYNSDGDFLIVPQKGNLLIYT--EFG---KMLVQPNEICVIQRGMRFSIDVFE--ETRGYILEVYGVHFELPDLGPI 242 (471)
T ss_dssp EEEESSEEEEEEEEESCEEEEE--TTE---EEEECTTEEEEECTTCCEEEECSS--SEEEEEEEEESCCEECCCCGGG
T ss_pred eeecCCCCEEEEEEeCCEEEEE--ecc---cEEeccCCEEEECCccEEEEeeCC--CceEEEEEccCCcccccccccc
Confidence 3455679999999999998864 334 467999999999999999987655 665555 4444 33544443
No 149
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.37 E-value=0.19 Score=45.90 Aligned_cols=72 Identities=13% Similarity=0.255 Sum_probs=52.0
Q ss_pred EEEcCCCc--CCCCCCCCCcEEEEEEeeEEEEEEEccCC--------------------eEEEEEEcCCCEEEECCCCeE
Q 027725 97 IDYEAGGL--NPPHTHPRATEMIFVLEGELDVGFISTAD--------------------KLISKTVKKGEIYVFPKALVH 154 (219)
Q Consensus 97 ~~l~pg~~--~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~--------------------~~~~~~L~~GDv~~~P~g~~H 154 (219)
.-+.|++. .++|+-+ .+-+++-++|+=++.+..+.. .....+|++||++++|+|.+|
T Consensus 168 ~Y~tp~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H 246 (489)
T 4diq_A 168 VYLTPPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIH 246 (489)
T ss_dssp EEEECSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEE
T ss_pred EEecCCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCce
Confidence 34555553 4799887 577888888988888765421 124689999999999999999
Q ss_pred EEEeCCCCCEEEEEE
Q 027725 155 FQKNNGDKPASVISA 169 (219)
Q Consensus 155 ~~~N~g~~~a~~l~~ 169 (219)
+..+.+++...-+.+
T Consensus 247 ~~~s~~~~~SlhlTi 261 (489)
T 4diq_A 247 QAECQDGVHSLHLTL 261 (489)
T ss_dssp EEEBCSSCCEEEEEE
T ss_pred EEEecCCCceEEEee
Confidence 999986554444433
No 150
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.06 E-value=0.071 Score=45.24 Aligned_cols=54 Identities=11% Similarity=0.106 Sum_probs=41.3
Q ss_pred EcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeC
Q 027725 99 YEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNN 159 (219)
Q Consensus 99 l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~ 159 (219)
+.+|.....-. ..+-++++++|+..+.+.+ + ++.|++||++.||++..|.+.-.
T Consensus 214 ~G~Ges~~~~~--~~d~wiWqLEGss~Vt~~~---q--~~~L~~~DsLLIpa~~~y~~~r~ 267 (286)
T 2qnk_A 214 YGQGSSEGLRQ--NVDVWLWQLEGSSVVTMGG---R--RLSLAPDDSLLVLAGTSYAWERT 267 (286)
T ss_dssp ECSEEEEECCC--SSCEEEEEEESCEEEEETT---E--EEEECTTEEEEECTTCCEEEEEC
T ss_pred EcCCccccccC--cCcEEEEEEcCceEEEECC---e--EEeccCCCEEEecCCCeEEEEec
Confidence 66665432211 1378999999999887755 3 88999999999999999998753
No 151
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=94.86 E-value=0.065 Score=46.51 Aligned_cols=70 Identities=11% Similarity=0.140 Sum_probs=51.9
Q ss_pred EEEc-CCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC------------------------------CeEEEEEEcCCCE
Q 027725 97 IDYE-AGGLNPPHTHPRATEMIFVLEGELDVGFISTA------------------------------DKLISKTVKKGEI 145 (219)
Q Consensus 97 ~~l~-pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~------------------------------~~~~~~~L~~GDv 145 (219)
+.+. +|+...+|+.+ ..-++.+++|+=++.+..+. -+....+|++||+
T Consensus 171 l~~g~~g~~~~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~ 249 (338)
T 3al5_A 171 FRISSPGLQLWTHYDV-MDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDV 249 (338)
T ss_dssp EEEECTTCEEEEECCS-SEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCE
T ss_pred eEECCCCCCccceECC-cccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCE
Confidence 3344 45567789887 56778889999888876441 0246789999999
Q ss_pred EEECCCCeEEEEeCCCCCEEEEEE
Q 027725 146 YVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 146 ~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
+++|+|..|...|.+ ....+.+
T Consensus 250 LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 250 LFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEECTTCEEEEEESS--CEEEEEE
T ss_pred EEECCCCeEEEeeCC--CEEEEEE
Confidence 999999999999984 4455553
No 152
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=94.55 E-value=0.24 Score=41.86 Aligned_cols=69 Identities=17% Similarity=0.276 Sum_probs=53.8
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECC--CCeEEEEeCCCCCEEEEEEe
Q 027725 98 DYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPK--ALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 98 ~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~--g~~H~~~N~g~~~a~~l~~~ 170 (219)
...++.-.++|-|..-+-+.||++|+++.. |..|. ...+++||+-++-+ |..|.-.|..+++...+-+.
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlW 115 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLW 115 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEE
Confidence 557777899999974444889999998874 44555 67899999888877 67899999877777777653
No 153
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=94.41 E-value=0.11 Score=41.80 Aligned_cols=83 Identities=17% Similarity=0.221 Sum_probs=55.2
Q ss_pred cccCCCCCCccce-EEEEEEEcCCCcCCCCCCCCCcEE----EEEEee-EEEEEEEccCCeEEEEEEcCCCEEEECCCCe
Q 027725 80 NVEKIPGLNTLGV-SLSRIDYEAGGLNPPHTHPRATEM----IFVLEG-ELDVGFISTADKLISKTVKKGEIYVFPKALV 153 (219)
Q Consensus 80 ~~~~~P~l~~~gi-s~~~~~l~pg~~~~pH~H~~a~E~----~~Vl~G-~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~ 153 (219)
-+.++|.....+. ++....+.||+.+.||..+....+ .+++-. ...+.+++ + .+..++|++++|.-...
T Consensus 89 lL~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~---~--~~~w~eGe~~~fDds~~ 163 (197)
T 3rcq_A 89 LLEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCAN---E--TKTWEEGKVLIFDDSFE 163 (197)
T ss_dssp HHTTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEETT---E--EECCCBTCEEEECTTSC
T ss_pred HHHhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEECC---E--EEEeeCCcEEEEcCCeE
Confidence 3456665442222 456678999999999988753332 222222 33444333 3 67899999999999999
Q ss_pred EEEEeCCCCCEEEE
Q 027725 154 HFQKNNGDKPASVI 167 (219)
Q Consensus 154 H~~~N~g~~~a~~l 167 (219)
|..+|.++++-+.+
T Consensus 164 Hev~N~~d~~RvvL 177 (197)
T 3rcq_A 164 HEVWQDASSFRLIF 177 (197)
T ss_dssp EEEEECSSSCEEEE
T ss_pred EEEEECCCCCEEEE
Confidence 99999987754444
No 154
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=94.12 E-value=0.044 Score=46.83 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=49.8
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEcc---------CCeEEEEEEcCCCEEEECCCCeEEEEeCCCC
Q 027725 92 VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIST---------ADKLISKTVKKGEIYVFPKALVHFQKNNGDK 162 (219)
Q Consensus 92 is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~---------~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~ 162 (219)
+.+.|+.+.||+.+.||.=+ .|+....+|..++.+.-. +|+ .+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 36788899999999998444 354445567776665422 233 67899999999999999999999985
Q ss_pred C-EEEEE
Q 027725 163 P-ASVIS 168 (219)
Q Consensus 163 ~-a~~l~ 168 (219)
+ ..++.
T Consensus 167 ~RIhLv~ 173 (290)
T 1e5r_A 167 SRQSLCV 173 (290)
T ss_dssp CCCEEEE
T ss_pred CeEEEEE
Confidence 4 44333
No 155
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=93.53 E-value=0.24 Score=43.02 Aligned_cols=76 Identities=18% Similarity=0.099 Sum_probs=51.8
Q ss_pred EEEc-CCCcCCCCCCCCCc-EEEEEEeeEEEEEEEccCC---------------------------------------eE
Q 027725 97 IDYE-AGGLNPPHTHPRAT-EMIFVLEGELDVGFISTAD---------------------------------------KL 135 (219)
Q Consensus 97 ~~l~-pg~~~~pH~H~~a~-E~~~Vl~G~~~v~~~~~~~---------------------------------------~~ 135 (219)
+-+. +|...+.|+++..+ -+..++.|+=++.+..++. +.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 3344 45567788887432 5888999988877764320 12
Q ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecC
Q 027725 136 ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNS 172 (219)
Q Consensus 136 ~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s 172 (219)
...++++||++++|+|..|+..|.++.-++-....+.
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~ 292 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASS 292 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCT
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCc
Confidence 4678999999999999999999986533333333333
No 156
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.52 E-value=0.17 Score=46.19 Aligned_cols=62 Identities=24% Similarity=0.209 Sum_probs=49.1
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEeeEEEEEEEccC-------------------------CeEEEEEEcCCCEEEECCCCe
Q 027725 100 EAGGLNPPHTHPRAT-EMIFVLEGELDVGFISTA-------------------------DKLISKTVKKGEIYVFPKALV 153 (219)
Q Consensus 100 ~pg~~~~pH~H~~a~-E~~~Vl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 153 (219)
+.|+..+.|..+.++ -+..+++|+=++.+.-+. .+.+..++++||++++|.|..
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 566678899987543 367899999999887552 123578999999999999999
Q ss_pred EEEEeCCC
Q 027725 154 HFQKNNGD 161 (219)
Q Consensus 154 H~~~N~g~ 161 (219)
|+..|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999744
No 157
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=93.51 E-value=0.3 Score=41.22 Aligned_cols=83 Identities=13% Similarity=0.142 Sum_probs=54.0
Q ss_pred ccceEEEEEEEcCCCc---CCCCCCCCC--c------EEEEE-Ee---eEEEEEEEccCCe-EEEEEEcCCCEEEECCCC
Q 027725 89 TLGVSLSRIDYEAGGL---NPPHTHPRA--T------EMIFV-LE---GELDVGFISTADK-LISKTVKKGEIYVFPKAL 152 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~---~~pH~H~~a--~------E~~~V-l~---G~~~v~~~~~~~~-~~~~~L~~GDv~~~P~g~ 152 (219)
.-.+-+..+ +.||+. -|||.|.+. . |+.|. +. |-+.-.+.+.++. -....++-||++++|+|.
T Consensus 150 a~~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy 228 (270)
T 2qjv_A 150 ADSLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY 228 (270)
T ss_dssp CSSCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB
T ss_pred cceEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc
Confidence 344566666 777764 499999854 3 88765 33 5554444333321 136899999999999999
Q ss_pred eEEEEeCCCCCEEEEEEecCC
Q 027725 153 VHFQKNNGDKPASVISAFNSQ 173 (219)
Q Consensus 153 ~H~~~N~g~~~a~~l~~~~s~ 173 (219)
|-....-.....++.+...+
T Consensus 229 -Hp~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 229 -HPVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp -CCEEECTTCEEEEEEEEECS
T ss_pred -CCCcCCCCcccEEEEEEECC
Confidence 98655434456677776653
No 158
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=93.08 E-value=0.53 Score=40.05 Aligned_cols=72 Identities=15% Similarity=0.309 Sum_probs=55.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcE-EEEEE-eeEEEEEEEccCCeEEEEEEcCCCEEEECC--CCeEEEEeCCCCCEEEEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATE-MIFVL-EGELDVGFISTADKLISKTVKKGEIYVFPK--ALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E-~~~Vl-~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~--g~~H~~~N~g~~~a~~l~~ 169 (219)
+....+.|+.-.++|-|. .-| +.||+ +|++... |..|. ...+++||+-++-+ |+.|.-.|..++++..+-+
T Consensus 42 ld~~~~~~~~Gf~~HPHr-g~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQl 116 (290)
T 1j1l_A 42 FDEFKGGRPGGFPDHPHR-GFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQL 116 (290)
T ss_dssp EEEEEECTTCBEEEEEEB-SEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEE
T ss_pred EEccccCCCCCCCCCCCC-CeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEE
Confidence 344467787778999997 566 78999 9999875 44455 57899999888876 6789999987677777765
Q ss_pred e
Q 027725 170 F 170 (219)
Q Consensus 170 ~ 170 (219)
.
T Consensus 117 W 117 (290)
T 1j1l_A 117 W 117 (290)
T ss_dssp E
T ss_pred E
Confidence 3
No 159
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=92.99 E-value=0.6 Score=33.07 Aligned_cols=66 Identities=15% Similarity=0.102 Sum_probs=47.8
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 97 IDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 97 ~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
-.+.||- .+....+.|++-|++|++++.+-+. .. .+.+++||.+.+|++.-..++-. ++...++.|
T Consensus 28 GVm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~-~e--w~~~~aGesF~Vpans~F~l~v~--~~~~YlC~y 93 (94)
T 2oyz_A 28 GVMLPGE---YTFGTQAPERMTVVKGALVVKRVGE-AD--WTTYSSGESFDVEGNSSFELQVK--DATAYLCEY 93 (94)
T ss_dssp EEECSEE---EEEEESSCEEEEEEESEEEEEETTC-SS--CEEEETTCEEEECSSEEEEEEES--SCEEEEEEC
T ss_pred EEEeceE---EEEcCCCeEEEEEEEeEEEEEcCCC-Cc--CEEECCCCEEEECCCCEEEEEEc--ccEeEEEEc
Confidence 3455654 2333447999999999999998653 22 67899999999999998877653 455555543
No 160
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=92.88 E-value=0.29 Score=44.27 Aligned_cols=76 Identities=16% Similarity=0.082 Sum_probs=55.1
Q ss_pred EcCCCcCCCCCCCCCc-EEEEEEeeEEEEEEEccC-------------------------CeEEEEEEcCCCEEEECCCC
Q 027725 99 YEAGGLNPPHTHPRAT-EMIFVLEGELDVGFISTA-------------------------DKLISKTVKKGEIYVFPKAL 152 (219)
Q Consensus 99 l~pg~~~~pH~H~~a~-E~~~Vl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~ 152 (219)
-++|+..+.|+.+.++ -+..+++|+=++.+.-+. .+.+..++++||+++||.|.
T Consensus 203 Gp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGW 282 (451)
T 2yu1_A 203 SVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGW 282 (451)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTC
T ss_pred ccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCc
Confidence 3556678889987543 567899999988876542 12456889999999999999
Q ss_pred eEEEEeCCCCCEEEEEEecCCC
Q 027725 153 VHFQKNNGDKPASVISAFNSQL 174 (219)
Q Consensus 153 ~H~~~N~g~~~a~~l~~~~s~~ 174 (219)
.|...|..+.-+.---..++.+
T Consensus 283 wH~V~nledsIait~NF~~~~n 304 (451)
T 2yu1_A 283 IHAVYTPTDTLVFGGNFLHSFN 304 (451)
T ss_dssp EEEEECSSCEEEEEEEECCSSS
T ss_pred eEEEecCCCeEEEeeeeCCccc
Confidence 9999998554333334555555
No 161
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=92.86 E-value=0.35 Score=43.70 Aligned_cols=75 Identities=23% Similarity=0.131 Sum_probs=53.7
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEeeEEEEEEEccC-------------------------CeEEEEEEcCCCEEEECCCCe
Q 027725 100 EAGGLNPPHTHPRAT-EMIFVLEGELDVGFISTA-------------------------DKLISKTVKKGEIYVFPKALV 153 (219)
Q Consensus 100 ~pg~~~~pH~H~~a~-E~~~Vl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 153 (219)
+.|+....|..+.++ -+..|++|+=++.+.-+. .+.+..++++||++++|.|..
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 556677889887543 467899999988887542 123578999999999999999
Q ss_pred EEEEeCCCCCEEEEEEecCCC
Q 027725 154 HFQKNNGDKPASVISAFNSQL 174 (219)
Q Consensus 154 H~~~N~g~~~a~~l~~~~s~~ 174 (219)
|+..|..+.-+.---.++..+
T Consensus 319 H~V~nledsIai~~NF~~~~n 339 (447)
T 3kv4_A 319 HAVLTPVDCLAFGGNFLHSLN 339 (447)
T ss_dssp EEEEESSCEEEEEEEECCSTT
T ss_pred EEEecCCCEEEEccccccccC
Confidence 999998553333333455544
No 162
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=92.55 E-value=0.29 Score=43.16 Aligned_cols=63 Identities=24% Similarity=0.230 Sum_probs=49.0
Q ss_pred EcCCCcCCCCCCCCCcE-EEEEEeeEEEEEEEccC-------------------------CeEEEEEEcCCCEEEECCCC
Q 027725 99 YEAGGLNPPHTHPRATE-MIFVLEGELDVGFISTA-------------------------DKLISKTVKKGEIYVFPKAL 152 (219)
Q Consensus 99 l~pg~~~~pH~H~~a~E-~~~Vl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~ 152 (219)
-++|+..+.|..+.++- +..+++|+=++.+.-+. .+.+..++++||++++|.|.
T Consensus 154 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGW 233 (371)
T 3k3o_A 154 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 233 (371)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCC
Confidence 35566788899875443 66899999988887432 13367899999999999999
Q ss_pred eEEEEeCCC
Q 027725 153 VHFQKNNGD 161 (219)
Q Consensus 153 ~H~~~N~g~ 161 (219)
.|+..|..+
T Consensus 234 wH~V~nled 242 (371)
T 3k3o_A 234 IHAVLTPVD 242 (371)
T ss_dssp EEEEEEEEE
T ss_pred eEEEecCCC
Confidence 999999744
No 163
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=92.17 E-value=0.64 Score=41.86 Aligned_cols=76 Identities=12% Similarity=0.227 Sum_probs=48.7
Q ss_pred ceEEEEEEEc--CCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEE-EEEcCCCEEEECCCCeEEEEeCC---CCCE
Q 027725 91 GVSLSRIDYE--AGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLIS-KTVKKGEIYVFPKALVHFQKNNG---DKPA 164 (219)
Q Consensus 91 gis~~~~~l~--pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~-~~L~~GDv~~~P~g~~H~~~N~g---~~~a 164 (219)
-+++.++++. ++.....-.+ .+..+++|++|++++...+ ++. . ..|++||++++|++..-.+.+.+ .+.+
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~~~--~~~-~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~ 431 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQITG--DDS-TKQKIDTGYVFFVAPGSSIELTADSANQDQDF 431 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEETT--CGG-GCEEEETTCEEEECTTCCEEEEECSSCCSSCC
T ss_pred eEEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEeCC--ccc-ceEEeccCCEEEEeCCCcEEEEEecccCCCcE
Confidence 4678888887 4422111122 3678999999999987532 110 1 58999999999999554555541 4456
Q ss_pred EEEEEe
Q 027725 165 SVISAF 170 (219)
Q Consensus 165 ~~l~~~ 170 (219)
+++.++
T Consensus 432 ~~~~a~ 437 (440)
T 1pmi_A 432 TTYRAF 437 (440)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 665554
No 164
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=91.99 E-value=0.79 Score=33.41 Aligned_cols=68 Identities=12% Similarity=0.174 Sum_probs=50.4
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEe
Q 027725 97 IDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 97 ~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
-.+.||- .+.+....+.|+.-|++|++++.+-+.+ . .+.+++|+.|.+|++.-..++-. ++..++|.|
T Consensus 42 GVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~~-e--W~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 42 GVILPTE-QPLTFETHVPERMEIISGECRVKIADST-E--SELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EEECCCS-SCEEEECSSCEEEEEEESEEEEEETTCS-S--CEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCcc-c--CEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 3466762 2244455589999999999999986532 2 67899999999999998887653 566666654
No 165
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=91.81 E-value=0.41 Score=42.56 Aligned_cols=73 Identities=21% Similarity=0.168 Sum_probs=53.4
Q ss_pred cCCCcCCCCCCCCCc-EEEEEEeeEEEEEEEccC-------------------------CeEEEEEEcCCCEEEECCCCe
Q 027725 100 EAGGLNPPHTHPRAT-EMIFVLEGELDVGFISTA-------------------------DKLISKTVKKGEIYVFPKALV 153 (219)
Q Consensus 100 ~pg~~~~pH~H~~a~-E~~~Vl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g~~ 153 (219)
+.|+..+.|+.+.++ -+..+++|+=++.+.-+. .+.+...+++||++++|.|..
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 556678889997544 367899999988887542 123568899999999999999
Q ss_pred EEEEeCCCCCEEEEE--EecCCC
Q 027725 154 HFQKNNGDKPASVIS--AFNSQL 174 (219)
Q Consensus 154 H~~~N~g~~~a~~l~--~~~s~~ 174 (219)
|+..|..+ ...+. .++..+
T Consensus 263 H~V~nled--SIai~~NFl~~~n 283 (397)
T 3kv9_A 263 HAVLTSQD--CMAFGGNFLHNLN 283 (397)
T ss_dssp EEEEEEEE--EEEEEEEECCSTT
T ss_pred EEccCCcC--eEEECCcccCchh
Confidence 99999743 34332 444444
No 166
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=91.35 E-value=1.2 Score=37.75 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=52.4
Q ss_pred ceEEEEEEEcCCC---cCCCCCCCCCcEEEEEEe----eEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCC
Q 027725 91 GVSLSRIDYEAGG---LNPPHTHPRATEMIFVLE----GELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKP 163 (219)
Q Consensus 91 gis~~~~~l~pg~---~~~pH~H~~a~E~~~Vl~----G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~ 163 (219)
.+-+....+.||+ .-|||.|.+..|..|--+ |. .+++.++.++.+...++-||++++|...+|. -.|.+.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gf-v~q~~g~p~Etrhi~V~n~daVlvP~wh~h~--~~G~~~ 255 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDAC-VFHMMGQPQETRHIVMHNEQAVISPSWSIHS--GVGTKA 255 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCC-EEEEEEETTEEEEEEECSSEEEEECTTCEEE--EEESSC
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCE-EEEEeCCCCCeeEEEEECCCEEEeCCCCCCC--CCCccc
Confidence 3456667788887 359999987666555443 33 3333444444445678999999999666666 346666
Q ss_pred EEEEEEecCCC
Q 027725 164 ASVISAFNSQL 174 (219)
Q Consensus 164 a~~l~~~~s~~ 174 (219)
-.++.+...++
T Consensus 256 Y~ylwvMAG~n 266 (282)
T 1xru_A 256 YTFIWGMVGEN 266 (282)
T ss_dssp CEEEEEEEESC
T ss_pred eEEEEEEEcCC
Confidence 66666655544
No 167
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=91.30 E-value=4.4 Score=31.77 Aligned_cols=106 Identities=16% Similarity=0.143 Sum_probs=69.3
Q ss_pred EEEEEEEcCCCcCCCCCC-CCCcEEEEEEeeE-EEEEEEccCCeEEEEEEc----CCC---EEEECCCCeEEEEeCCCCC
Q 027725 93 SLSRIDYEAGGLNPPHTH-PRATEMIFVLEGE-LDVGFISTADKLISKTVK----KGE---IYVFPKALVHFQKNNGDKP 163 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H-~~a~E~~~Vl~G~-~~v~~~~~~~~~~~~~L~----~GD---v~~~P~g~~H~~~N~g~~~ 163 (219)
+....-+.+|.. -||| -+++|+.+-..|. +++.+..++|+.....|. +|+ .++||+|....-+. | .
T Consensus 54 TaIYfLL~~~~~--S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~ 128 (172)
T 3loi_A 54 TMIYYLMQAGQP--DPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV-D--G 128 (172)
T ss_dssp EEEEEEEETTCC--EEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE-S--S
T ss_pred eEEEEEEcCCCC--ccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe-C--C
Confidence 455566777774 4555 2489999999996 688888888876666664 577 78999999887776 3 2
Q ss_pred EEEEEEecCCCCccchhchhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027725 164 ASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIK 211 (219)
Q Consensus 164 a~~l~~~~s~~pg~~~~~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~ 211 (219)
..+++.. -.||+..-...+ .+.+.|.+.|.--++.|++|-
T Consensus 129 ~~LVsct--VaPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 129 YCLASVL--VAPGFDFKDFSL------GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp EEEEEEE--EESCCCGGGCEE------CCHHHHHHHCGGGHHHHHHTS
T ss_pred cEEEEEE--EcCCccchhcEE------cCHHHHHHHCchHHHHHHHhc
Confidence 3333321 245544333232 346666667766667777663
No 168
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=91.15 E-value=0.57 Score=41.60 Aligned_cols=64 Identities=22% Similarity=0.214 Sum_probs=49.5
Q ss_pred EEcCCCcCCCCCCCCC-cEEEEEEeeEEEEEEEccC-------------------------CeEEEEEEcCCCEEEECCC
Q 027725 98 DYEAGGLNPPHTHPRA-TEMIFVLEGELDVGFISTA-------------------------DKLISKTVKKGEIYVFPKA 151 (219)
Q Consensus 98 ~l~pg~~~~pH~H~~a-~E~~~Vl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g 151 (219)
--+.|+....|..+.+ .-+..+++|+=++.+.-+. .+.+..++++||++++|.|
T Consensus 180 mGp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsG 259 (392)
T 3pua_A 180 ICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSG 259 (392)
T ss_dssp EECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTT
T ss_pred EeCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCC
Confidence 3356667888988754 3577899999988886542 1235789999999999999
Q ss_pred CeEEEEeCCC
Q 027725 152 LVHFQKNNGD 161 (219)
Q Consensus 152 ~~H~~~N~g~ 161 (219)
..|+..|..+
T Consensus 260 WwH~V~nled 269 (392)
T 3pua_A 260 WIYATLTPVD 269 (392)
T ss_dssp CEEEEEEEEE
T ss_pred ceEEEecCCC
Confidence 9999999744
No 169
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=90.97 E-value=4.3 Score=33.11 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=69.0
Q ss_pred EEEEEEEcCCCcCCCCCC-CCCcEEEEEEeeE-EEEEEEccCC----------------------------eEEEEEE--
Q 027725 93 SLSRIDYEAGGLNPPHTH-PRATEMIFVLEGE-LDVGFISTAD----------------------------KLISKTV-- 140 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H-~~a~E~~~Vl~G~-~~v~~~~~~~----------------------------~~~~~~L-- 140 (219)
+....-+.+|.. -||| -+++|+++...|. +++.+..++| +.....|
T Consensus 61 TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~ 138 (225)
T 3m3i_A 61 TTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGA 138 (225)
T ss_dssp EEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESS
T ss_pred eeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCC
Confidence 455566788874 5666 3599999999998 5787877666 4445566
Q ss_pred --cCCC--EEEECCCCeEEEEeCCCC-----CEEEEEEecCCCCccchhchhhhcCCCCCCHHHHHHHcCCCHHHHHHHH
Q 027725 141 --KKGE--IYVFPKALVHFQKNNGDK-----PASVISAFNSQLPGTQSIAATLFTATPPVPDNVLTKAFQVGTKEIEKIK 211 (219)
Q Consensus 141 --~~GD--v~~~P~g~~H~~~N~g~~-----~a~~l~~~~s~~pg~~~~~~~lf~~~~~~~~~vl~~af~~~~~~v~~l~ 211 (219)
.+|+ .++||+|....-+..+++ ...+++.. -.||+..-...+ .+.+-|.+.|.--++.|++|-
T Consensus 139 d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCt--VaPGFdF~DFel------~~~~~L~~~~P~~~~~I~~lt 210 (225)
T 3m3i_A 139 RVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCI--VSPGFDYRDFEI------FTQAQLMELYPQHEAVIKQMA 210 (225)
T ss_dssp CGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEE--EESCCCGGGCEE------CBHHHHHHHCGGGHHHHHHHS
T ss_pred CccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEE--EcCCccchhcEe------cCHHHHHHHCchHHHHHHHhc
Confidence 4465 679999998887766543 33333321 235544333232 345666666766677777764
No 170
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=90.86 E-value=1.2 Score=32.82 Aligned_cols=61 Identities=18% Similarity=0.165 Sum_probs=42.0
Q ss_pred cCCCCCCCC-CcEEEEEEeeEEEEEEEccCCe---EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEE
Q 027725 104 LNPPHTHPR-ATEMIFVLEGELDVGFISTADK---LISKTVKKGEIYVFPKALVHFQKNNGDKPASV 166 (219)
Q Consensus 104 ~~~pH~H~~-a~E~~~Vl~G~~~v~~~~~~~~---~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~ 166 (219)
+...|.-.. .-..+-|++|++++...+.++. .....+.+|+..++|+...|.+... +++++
T Consensus 28 l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~s--dD~~f 92 (119)
T 3dl3_A 28 LLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELS--DDAQF 92 (119)
T ss_dssp HHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEEC--TTCEE
T ss_pred HHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEEC--CCeEE
Confidence 444554432 2236789999999987654432 2356789999999999999999943 33444
No 171
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=89.70 E-value=0.48 Score=42.04 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=41.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHF 155 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~ 155 (219)
-+++.++++.++... ..+. +..+++|++|++++... ++ ...|++||++++|++...+
T Consensus 323 ~F~v~~~~l~~~~~~--~~~~-~~~il~v~~G~~~l~~~---~~--~~~l~~G~~~fvpa~~~~~ 379 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQH-SAAILFCVEGEAVLRKD---EQ--RLVLKPGESAFIGADESPV 379 (394)
T ss_dssp SCEEEEEECCSSCEE--ECCS-SCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECGGGCCE
T ss_pred EEEEEEEEEcCCeEE--ecCC-CcEEEEEEeceEEEEEC---Ce--EEEEccCcEEEEeCCCceE
Confidence 467888888755321 2333 67999999999987642 23 5789999999999985333
No 172
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=89.47 E-value=0.69 Score=39.77 Aligned_cols=57 Identities=21% Similarity=0.335 Sum_probs=41.0
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHF 155 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~ 155 (219)
-+++.++++.++... ....+..+++|++|++++.. +++ ...|++||.+++|++.-.+
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~~~ 306 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMPDF 306 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCCE
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCceE
Confidence 357777777654332 22247889999999998865 233 5689999999999987433
No 173
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=89.10 E-value=0.68 Score=42.56 Aligned_cols=64 Identities=17% Similarity=0.196 Sum_probs=48.9
Q ss_pred EEcCCCcCCCCCCCCCc-EEEEEEeeEEEEEEEccC-------------------------CeEEEEEEcCCCEEEECCC
Q 027725 98 DYEAGGLNPPHTHPRAT-EMIFVLEGELDVGFISTA-------------------------DKLISKTVKKGEIYVFPKA 151 (219)
Q Consensus 98 ~l~pg~~~~pH~H~~a~-E~~~Vl~G~~~v~~~~~~-------------------------~~~~~~~L~~GDv~~~P~g 151 (219)
--+.|+....|.-+.++ -+..|++|+=.+.+.-+. ++.+..++++||.+++|.|
T Consensus 302 mg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsG 381 (528)
T 3pur_A 302 AGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAG 381 (528)
T ss_dssp EECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTT
T ss_pred EeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCC
Confidence 33556677888886543 578899999988887542 1234678999999999999
Q ss_pred CeEEEEeCCC
Q 027725 152 LVHFQKNNGD 161 (219)
Q Consensus 152 ~~H~~~N~g~ 161 (219)
.+|+..|..+
T Consensus 382 W~HaV~tleD 391 (528)
T 3pur_A 382 WIHAVLTPVD 391 (528)
T ss_dssp CEEEEEEEEE
T ss_pred ceEEEecCCC
Confidence 9999999743
No 174
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=88.82 E-value=1.2 Score=35.96 Aligned_cols=64 Identities=19% Similarity=0.258 Sum_probs=41.5
Q ss_pred EEEEEEEcCCCcCCCCCCCCCc--EEEEEE----eeEEEEEEEccC------------------CeEEEEEEcCCCEEEE
Q 027725 93 SLSRIDYEAGGLNPPHTHPRAT--EMIFVL----EGELDVGFISTA------------------DKLISKTVKKGEIYVF 148 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H~~a~--E~~~Vl----~G~~~v~~~~~~------------------~~~~~~~L~~GDv~~~ 148 (219)
.......++|+...+|.|+++. -++|+- .|++.+ .++. .......-++|++++|
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f--~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKL--EDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEE--ECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEE--eCCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 4555678999999999998422 133332 244444 3321 1112445699999999
Q ss_pred CCCCeEEEEe
Q 027725 149 PKALVHFQKN 158 (219)
Q Consensus 149 P~g~~H~~~N 158 (219)
|+.+.|...-
T Consensus 182 pS~l~H~V~p 191 (216)
T 2rg4_A 182 ESWLRHEVPM 191 (216)
T ss_dssp ETTSCEEECC
T ss_pred CCCCEEeccC
Confidence 9999999853
No 175
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=88.37 E-value=2 Score=36.41 Aligned_cols=81 Identities=19% Similarity=0.193 Sum_probs=43.5
Q ss_pred ceEEEEEEEcCCCc---CCCCCCCCCcEEEEEEe----eEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCC
Q 027725 91 GVSLSRIDYEAGGL---NPPHTHPRATEMIFVLE----GELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKP 163 (219)
Q Consensus 91 gis~~~~~l~pg~~---~~pH~H~~a~E~~~Vl~----G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~ 163 (219)
.+-+....+.||+. -|||.|.+..|..|--+ |. .+++.++-++.+...++-||++++|++-.|.. .|...
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~-v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp~--~Gt~~ 255 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTR-IFHMMGKPDETKHLVMSNEQAAISPSWSIHSG--VGTSN 255 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCC-EEEEESSTTSCEEEEECTTEEEEECTTSCCCE--EESSC
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCe-EEEECCCCCceEEEEEECCCEEEeCCCcccCC--CCCcC
Confidence 34566667778762 59999987667665332 22 22333333444457889999999999988862 34444
Q ss_pred EEEEEEecCCC
Q 027725 164 ASVISAFNSQL 174 (219)
Q Consensus 164 a~~l~~~~s~~ 174 (219)
-.++.+...++
T Consensus 256 Y~ylwvMAG~n 266 (289)
T 1ywk_A 256 YSFIWAMCGEN 266 (289)
T ss_dssp CEEEEEEECC-
T ss_pred eEEEEEEEcCC
Confidence 44666555443
No 176
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=88.13 E-value=4.6 Score=33.20 Aligned_cols=69 Identities=9% Similarity=0.026 Sum_probs=47.3
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..+.+..+.+++|.....-..+.-.-++||++|++++ ++ ..|++||.+++..+..-.+.+. ++++++.+
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v-----~g----~~l~~gd~~~~~~~~~l~l~a~--~~a~~Ll~ 226 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTI-----NG----VKASTSDGLAIWDEQAISIHAD--SDSEVLLF 226 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEE-----TT----EEEETTCEEEEESCSCEEEEES--SSEEEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEE-----CC----EEeCCCCEEEECCCCeEEEEeC--CCCEEEEE
Confidence 3567888899999865333333345679999999877 23 2699999999987665455552 45655544
No 177
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=87.88 E-value=1.6 Score=31.48 Aligned_cols=55 Identities=16% Similarity=0.094 Sum_probs=42.3
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEe
Q 027725 98 DYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKN 158 (219)
Q Consensus 98 ~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N 158 (219)
.+.||. .+....+.|++-|++|++++.+-+. .. .+.+++|+.|.+|++.-..++-
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~-~e--W~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAEGA-ND--VQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECTTC-SS--CEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECCCC-cc--CEEECCCCEEEECCCCcEEEEE
Confidence 456663 3444558999999999999987653 22 6789999999999998877654
No 178
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=85.54 E-value=2.6 Score=35.77 Aligned_cols=57 Identities=12% Similarity=0.211 Sum_probs=40.1
Q ss_pred ceEEEEEEEcCCCcCCCCCCCCCc-EEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEE
Q 027725 91 GVSLSRIDYEAGGLNPPHTHPRAT-EMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQK 157 (219)
Q Consensus 91 gis~~~~~l~pg~~~~pH~H~~a~-E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~ 157 (219)
-+++.++++.+.... .. .+. .+++|++| +++.. +++ ...|++||++++|++.-.+..
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCEEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCceEEE
Confidence 357777777643222 23 467 89999999 88765 233 468999999999998854433
No 179
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=83.23 E-value=2.9 Score=29.92 Aligned_cols=52 Identities=17% Similarity=0.244 Sum_probs=38.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 146 (219)
+....+++|..+-..-.+ ...+.+|++|.+.+...+.+|+ .....+.+||++
T Consensus 28 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEGDP-GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp CEEEEECTTCEEECTTSE-ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred ceEEEeCCCCEEECCCCC-CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 345678888766443333 6789999999999988776664 345678999987
No 180
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=83.01 E-value=5.9 Score=32.87 Aligned_cols=72 Identities=13% Similarity=0.105 Sum_probs=47.2
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
..+.+..+.+++|........... -++||++|++++. +.++. ...|.+||.+++..+..-.+.+ .++++++.
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~~~--~~~l~~gd~~~l~~~~~l~l~a--~~~a~~LL 251 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THHEE--KAALTCGDGAFIRDEANITLVA--DSPLRALL 251 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETTEE--EEEECTTCEEEEESCSEEEEEE--SSSEEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccccc--ceEECCCCEEEECCCCeEEEEe--CCCCEEEE
Confidence 356788889999986643333323 7899999998874 21111 3579999999997665444444 24555543
No 181
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=82.61 E-value=2.2 Score=30.41 Aligned_cols=53 Identities=15% Similarity=0.266 Sum_probs=33.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EE---EEEEcCCCEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LI---SKTVKKGEIYV 147 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~---~~~L~~GDv~~ 147 (219)
+....+++|..+-..-.+ +..+.+|++|.+.+...+++|+ .. ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKENSK-ADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCCCC-CCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 455678888765333233 7899999999999987665553 23 45789999873
No 182
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=81.58 E-value=7 Score=32.74 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=47.0
Q ss_pred cceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECC-C----CeEEEEeCCCCCE
Q 027725 90 LGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPK-A----LVHFQKNNGDKPA 164 (219)
Q Consensus 90 ~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~-g----~~H~~~N~g~~~a 164 (219)
..+.+..+.+++|........+...-++||++|++++. +. ...|.+||.+++.. + ..-.+.+. +++
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-----g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~a 235 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-----AD--NIEGKAGQALFFSRHNRGEETELNVTAR--EKL 235 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-----TT--TEEEETTEEEEECCCCTTCEEEEEEEES--SSE
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-----CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--CCc
Confidence 46778889999998764333222356899999998762 21 13699999999986 5 43344443 356
Q ss_pred EEEEE
Q 027725 165 SVISA 169 (219)
Q Consensus 165 ~~l~~ 169 (219)
+++.+
T Consensus 236 ~~Ll~ 240 (277)
T 2p17_A 236 RLLLY 240 (277)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65544
No 183
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=81.44 E-value=7.5 Score=32.82 Aligned_cols=77 Identities=12% Similarity=0.162 Sum_probs=49.2
Q ss_pred ccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEE
Q 027725 89 TLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 89 ~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~ 168 (219)
...+.+..+.+++|........+...-++||++|++.+. +. .. ...+.++.++++..|..-.+.+.+.++++++.
T Consensus 166 ~~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~-~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LL 240 (290)
T 1j1l_A 166 RTPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PD-DA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHFVL 240 (290)
T ss_dssp SSCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CT-TS--CEEECTTEEEEECSCSEEEEECCSSSCEEEEE
T ss_pred cCCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cc-cc--ceeccCceEEEecCCCEEEEEEcCCCCcEEEE
Confidence 345778889999998763332332357899999999872 21 10 13566677777776666556654456677665
Q ss_pred Ee
Q 027725 169 AF 170 (219)
Q Consensus 169 ~~ 170 (219)
+-
T Consensus 241 l~ 242 (290)
T 1j1l_A 241 IA 242 (290)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 184
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=80.94 E-value=6.3 Score=30.05 Aligned_cols=52 Identities=15% Similarity=0.120 Sum_probs=38.9
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 146 (219)
+....+++|..+-..--+ +..+.+|++|.+.+...+++|+ .....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~-~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDP-GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 455678888865443333 7899999999999998877774 345678999986
No 185
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=80.83 E-value=5.6 Score=30.06 Aligned_cols=52 Identities=12% Similarity=-0.039 Sum_probs=38.1
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYV 147 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~ 147 (219)
....+++|...-.--.+ ...+.+|++|.+++...+++|+. ....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~G~~-~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKTGEI-CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECCCCe-eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 45677888765332233 68899999999999988777753 345689999985
No 186
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=80.39 E-value=1.7 Score=38.33 Aligned_cols=40 Identities=13% Similarity=0.030 Sum_probs=31.2
Q ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEecCCCC
Q 027725 136 ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFNSQLP 175 (219)
Q Consensus 136 ~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~p 175 (219)
++..-++||.++||+|.+|..+|..+.-.+..-.++.++-
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~ 332 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHL 332 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGH
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhH
Confidence 5677899999999999999999997655555555555543
No 187
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=80.36 E-value=6.4 Score=29.95 Aligned_cols=52 Identities=15% Similarity=0.310 Sum_probs=37.5
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYV 147 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~ 147 (219)
....+++|...-..-- ....+.+|++|.+.+...+++|+ .....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIYAGD-RCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEcCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 3457788876533222 36789999999999988877665 3456789999874
No 188
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=79.98 E-value=6 Score=29.00 Aligned_cols=51 Identities=6% Similarity=0.014 Sum_probs=36.5
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 146 (219)
+....+++|..+-..-- .+..+.+|++|.+.+.. ..+|+ .....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQGD-DGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeCCC-CCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 44567888886543323 37899999999999988 55664 345578899966
No 189
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=79.07 E-value=5.4 Score=30.63 Aligned_cols=117 Identities=12% Similarity=0.102 Sum_probs=71.0
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEEEC-----CCCeEEEEeCCCCCEEEEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYVFP-----KALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P-----~g~~H~~~N~g~~~a~~l~ 168 (219)
....+++|...-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++-.. ....+.... .+++.++.
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~~ 99 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVA--VEDTELLA 99 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEE--SSSEEEEE
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEE--cCCEEEEE
Confidence 45677888765443333 6889999999999998877775 345678999987321 112233333 34555555
Q ss_pred EecC-------CCCccch----------------------------hchhhh---cC----CCCCCHHHHHHHcCCCHHH
Q 027725 169 AFNS-------QLPGTQS----------------------------IAATLF---TA----TPPVPDNVLTKAFQVGTKE 206 (219)
Q Consensus 169 ~~~s-------~~pg~~~----------------------------~~~~lf---~~----~~~~~~~vl~~af~~~~~~ 206 (219)
+-.. .+|.... ++..+. .. ...++.+.++..+|++.+.
T Consensus 100 i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 179 (216)
T 4ev0_A 100 LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRET 179 (216)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHH
T ss_pred EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHH
Confidence 4211 2333211 011110 00 0147899999999999999
Q ss_pred HHHHHhhc
Q 027725 207 IEKIKSKL 214 (219)
Q Consensus 207 v~~l~~~~ 214 (219)
+.++.+++
T Consensus 180 vsR~l~~l 187 (216)
T 4ev0_A 180 VSRVLHAL 187 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887765
No 190
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=79.00 E-value=6.2 Score=30.90 Aligned_cols=51 Identities=14% Similarity=0.222 Sum_probs=37.9
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIY 146 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 146 (219)
....+++|..+-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 45677888766433333 6789999999999998877775 345678999987
No 191
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=78.95 E-value=7 Score=29.81 Aligned_cols=117 Identities=13% Similarity=0.144 Sum_probs=70.8
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEEEC----CC--CeEEEEeCCCCCEEEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYVFP----KA--LVHFQKNNGDKPASVI 167 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~~P----~g--~~H~~~N~g~~~a~~l 167 (219)
....+++|...-..-.+ ...+.+|++|.+.+...+++|+. ....+.+||++-.. .+ ..+..... +++.++
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v~ 96 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAK--TACEVA 96 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEES--SCEEEE
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEEC--CcEEEE
Confidence 34567788765433333 68899999999999888777753 45678999988422 12 22333333 455555
Q ss_pred EEec-------CCCCccch----------------------------hchhhh--cCC-----------CCCCHHHHHHH
Q 027725 168 SAFN-------SQLPGTQS----------------------------IAATLF--TAT-----------PPVPDNVLTKA 199 (219)
Q Consensus 168 ~~~~-------s~~pg~~~----------------------------~~~~lf--~~~-----------~~~~~~vl~~a 199 (219)
.+-. ..+|.... ++..+. ... -.++.+.++..
T Consensus 97 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA~~ 176 (210)
T 3ryp_A 97 EISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQI 176 (210)
T ss_dssp EEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHHHH
T ss_pred EEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHHHH
Confidence 5421 12343211 011110 000 04788999999
Q ss_pred cCCCHHHHHHHHhhc
Q 027725 200 FQVGTKEIEKIKSKL 214 (219)
Q Consensus 200 f~~~~~~v~~l~~~~ 214 (219)
+|++.+.+.++.+++
T Consensus 177 lg~sr~tvsR~l~~L 191 (210)
T 3ryp_A 177 VGCSRETVGRILKML 191 (210)
T ss_dssp HTCCHHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHHH
Confidence 999999999887765
No 192
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=78.78 E-value=6.4 Score=30.68 Aligned_cols=53 Identities=9% Similarity=0.147 Sum_probs=38.6
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYV 147 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~ 147 (219)
+....+++|..+-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 456778888876554343 6889999999999988876665 3456789999874
No 193
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=78.65 E-value=20 Score=27.43 Aligned_cols=89 Identities=16% Similarity=0.136 Sum_probs=56.8
Q ss_pred CCCcEEEEecccCCCCCCccceEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeE-EEEEEEccCCeEEEEEEc----CCC-
Q 027725 71 SVGSLVTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHTHPRATEMIFVLEGE-LDVGFISTADKLISKTVK----KGE- 144 (219)
Q Consensus 71 ~~g~~~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~-~~v~~~~~~~~~~~~~L~----~GD- 144 (219)
+-|+-.+....+...+-.. -.+....-+.+|.....|.-.+++|+.+-..|. +++.+..++|......|. +|+
T Consensus 20 PEGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~ 98 (154)
T 1znp_A 20 PEGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGER 98 (154)
T ss_dssp TTSSEEEEEEECSSSTTTC-SCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEE
T ss_pred CCCccEEEEEeCCCCCCCc-ceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcc
Confidence 5666666655443222221 234444456676654444432499999999998 778788777765556664 465
Q ss_pred -EEEECCCCeEEEEeCC
Q 027725 145 -IYVFPKALVHFQKNNG 160 (219)
Q Consensus 145 -v~~~P~g~~H~~~N~g 160 (219)
.++||+|....-+..|
T Consensus 99 pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 99 PQVIVPANCWQSAESLG 115 (154)
T ss_dssp SEEEECTTCEEEEEESS
T ss_pred cEEEEcCCEEEEeeECC
Confidence 4899999998877654
No 194
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=77.56 E-value=6.6 Score=30.45 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=38.5
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYV 147 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~ 147 (219)
....+++|..+-..-.+ ...+.+|++|.+.+...+++|+. ....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 45677888765443333 68899999999999988777753 456789999884
No 195
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=77.30 E-value=14 Score=30.85 Aligned_cols=70 Identities=9% Similarity=0.023 Sum_probs=48.3
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEE--cC--------CCEEEECCCCeEEEEeCCC
Q 027725 92 VSLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTV--KK--------GEIYVFPKALVHFQKNNGD 161 (219)
Q Consensus 92 is~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L--~~--------GDv~~~P~g~~H~~~N~g~ 161 (219)
+.+.+++|++|.......-. .+-.++.+.|++++.+.+ + ++.+ .. .|.+++|+|.--.+...+
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~-~E~~iv~l~G~~~V~~~g---~--~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~- 101 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDE-RERCLVLVAGLASVXAAD---S--FFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET- 101 (270)
T ss_dssp CEEEEEEECTTCEEEECCSS-EEEEEEEEESCEEEEETT---E--EEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS-
T ss_pred eEEEEEEecCCCEEEecCCC-cEEEEEEecceEEEEECC---E--EEeccccccccccCCCCcEEEECCCCEEEEEecC-
Confidence 56777899999987766553 344566788999998754 3 3433 22 489999999966666654
Q ss_pred CCEEEEEE
Q 027725 162 KPASVISA 169 (219)
Q Consensus 162 ~~a~~l~~ 169 (219)
++++...
T Consensus 102 -~~~~~v~ 108 (270)
T 2qjv_A 102 -DLELAVC 108 (270)
T ss_dssp -SEEEEEE
T ss_pred -CceEEEE
Confidence 4655544
No 196
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=77.21 E-value=7.5 Score=30.18 Aligned_cols=116 Identities=10% Similarity=0.196 Sum_probs=70.2
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEEEC-----CCCeEEEEeCCCCCEEEEEE
Q 027725 96 RIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYVFP-----KALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 96 ~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~~P-----~g~~H~~~N~g~~~a~~l~~ 169 (219)
...+++|..+-..-.+ +..+.+|++|.+.+...+++|+. ....+.+||++-.. ....+..... +++.++.+
T Consensus 31 ~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~~i 107 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEP-GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAVSM 107 (227)
T ss_dssp EEEECTTCEEECTTCC-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEEEE
T ss_pred EEEeCCCCEEEcCCCc-CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEEEE
Confidence 4677888765433233 68899999999999888766653 35678999987321 2223334433 44555543
Q ss_pred e-------cCCCCccch----------------------------hchhh------hc--------CCCCCCHHHHHHHc
Q 027725 170 F-------NSQLPGTQS----------------------------IAATL------FT--------ATPPVPDNVLTKAF 200 (219)
Q Consensus 170 ~-------~s~~pg~~~----------------------------~~~~l------f~--------~~~~~~~~vl~~af 200 (219)
- -..+|.... ++..+ ++ -.-.++.+.|+..+
T Consensus 108 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~lA~~l 187 (227)
T 3d0s_A 108 DRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLV 187 (227)
T ss_dssp EHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEECCCCHHHHHHHH
T ss_pred eHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcCCCCHHHHHHHh
Confidence 2 123443211 01101 00 00147899999999
Q ss_pred CCCHHHHHHHHhhc
Q 027725 201 QVGTKEIEKIKSKL 214 (219)
Q Consensus 201 ~~~~~~v~~l~~~~ 214 (219)
|++.+.+.+..+++
T Consensus 188 g~sr~tvsR~l~~l 201 (227)
T 3d0s_A 188 GASRETVNKALADF 201 (227)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 99999999887765
No 197
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=76.14 E-value=2 Score=36.59 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=33.9
Q ss_pred CcEEEEEEe-eEEEEEEEcc-----------CCe------EEEEEEcCCCEEEECCCCeEEEE
Q 027725 113 ATEMIFVLE-GELDVGFIST-----------ADK------LISKTVKKGEIYVFPKALVHFQK 157 (219)
Q Consensus 113 a~E~~~Vl~-G~~~v~~~~~-----------~~~------~~~~~L~~GDv~~~P~g~~H~~~ 157 (219)
-.|++|+++ .++..||-.. ++. +....+++||.+++|+|.+|...
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 479999998 5566665321 123 45788999999999999999974
No 198
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=76.09 E-value=5.4 Score=31.37 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=71.7
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEEEC----CC--CeEEEEeCCCCCEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYVFP----KA--LVHFQKNNGDKPASV 166 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P----~g--~~H~~~N~g~~~a~~ 166 (219)
+....+++|..+-..-.+ +..+.+|++|.+.+...+++|+ .....+.+||++-.. .. ..+..... +++.+
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCEEE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cceEE
Confidence 456678888876443333 6889999999999987766664 345678999987322 21 23344443 44555
Q ss_pred EEEec-------CCCCccch----------------------------hchhhhc--CC------CCCCHHHHHHHcCCC
Q 027725 167 ISAFN-------SQLPGTQS----------------------------IAATLFT--AT------PPVPDNVLTKAFQVG 203 (219)
Q Consensus 167 l~~~~-------s~~pg~~~----------------------------~~~~lf~--~~------~~~~~~vl~~af~~~ 203 (219)
+.+-. ..+|.... ++..+.. .. -.++.+.|+..+|++
T Consensus 120 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~s 199 (232)
T 1zyb_A 120 VCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDT 199 (232)
T ss_dssp EEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSC
T ss_pred EEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCC
Confidence 54321 12333111 1111111 00 137899999999999
Q ss_pred HHHHHHHHhhc
Q 027725 204 TKEIEKIKSKL 214 (219)
Q Consensus 204 ~~~v~~l~~~~ 214 (219)
.+.+.++.+++
T Consensus 200 r~tvsR~l~~l 210 (232)
T 1zyb_A 200 RLNISKTLNEL 210 (232)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 99999887765
No 199
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=76.02 E-value=6.4 Score=29.94 Aligned_cols=50 Identities=12% Similarity=0.071 Sum_probs=34.4
Q ss_pred EEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEEE
Q 027725 98 DYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYVF 148 (219)
Q Consensus 98 ~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~ 148 (219)
.+++|..+-..-.+ +..+++|++|.+.+...+++|+ .....+.+||++-.
T Consensus 3 ~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge 53 (195)
T 3b02_A 3 RFARKETIYLRGEE-ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGE 53 (195)
T ss_dssp EECTTCEEECTTSB-CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECG
T ss_pred EcCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEech
Confidence 45566554322223 6779999999999988776665 34567899998743
No 200
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=75.19 E-value=9.4 Score=30.66 Aligned_cols=53 Identities=13% Similarity=0.171 Sum_probs=39.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYV 147 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~ 147 (219)
+....+++|..+-..--+ ...+.+|++|.+.+...+++|+. ....+.+||++-
T Consensus 69 ~~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 69 CHIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CEEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 355678888876433333 68899999999999988777753 456789999884
No 201
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=75.17 E-value=2.8 Score=30.31 Aligned_cols=52 Identities=10% Similarity=0.255 Sum_probs=35.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~ 146 (219)
+....+++|..+-..-.+ ...+.+|++|.+.+...+++|+. ....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 455678888866443333 68899999999999866555542 34578899986
No 202
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=74.73 E-value=42 Score=29.17 Aligned_cols=77 Identities=19% Similarity=0.117 Sum_probs=49.0
Q ss_pred EEEecccCCCCCCccceEEEEEEEcCCCcCCCCC-CCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeE
Q 027725 76 VTAANVEKIPGLNTLGVSLSRIDYEAGGLNPPHT-HPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVH 154 (219)
Q Consensus 76 ~~~~~~~~~P~l~~~gis~~~~~l~pg~~~~pH~-H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H 154 (219)
.+.+.....|-+..+ ....+++..++...--. | +.--..|++|++++.+..++|. ....|+++|..++-+-++|
T Consensus 320 Ye~AS~A~~phlPdl--~g~~l~Vd~~d~~~DL~d~--ge~hY~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H 394 (443)
T 3g7d_A 320 YEAASMASAAHLPDL--VGSFLRVDADGRGADLIDH--AENHYVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRH 394 (443)
T ss_dssp EEEEECCCCTTCTTC--EEEEEEEC------CBCCS--SEEEEEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCE
T ss_pred eehhhhhccccCCCc--eeEEEEecCCCcchhhhhc--ccceEEEecCceEEEecCCCCc-cceEECCCCceeecccccc
Confidence 344455555555433 23334444443322111 3 3444569999999999877665 7899999999999999999
Q ss_pred EEE
Q 027725 155 FQK 157 (219)
Q Consensus 155 ~~~ 157 (219)
.+.
T Consensus 395 ~w~ 397 (443)
T 3g7d_A 395 RWH 397 (443)
T ss_dssp EEE
T ss_pred ccc
Confidence 997
No 203
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=74.41 E-value=6.5 Score=30.05 Aligned_cols=49 Identities=14% Similarity=0.275 Sum_probs=36.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....+.||..+-..-.+ +..+.+|++|++.+.. ++|+ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTF-GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSC-CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCc-CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 456778888876443333 6789999999999865 4565 46788999986
No 204
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=74.19 E-value=2.3 Score=36.39 Aligned_cols=45 Identities=22% Similarity=0.368 Sum_probs=31.5
Q ss_pred CcEEEEEEeeE--EEEEEEccC------------C----eEEEEEEcCCCEEEECCCCeEEEE
Q 027725 113 ATEMIFVLEGE--LDVGFISTA------------D----KLISKTVKKGEIYVFPKALVHFQK 157 (219)
Q Consensus 113 a~E~~~Vl~G~--~~v~~~~~~------------~----~~~~~~L~~GDv~~~P~g~~H~~~ 157 (219)
-.|++|+++.. ..+.++.+. + -+....+++||.+++|+|.+|...
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 58999999962 222222211 0 024689999999999999999973
No 205
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=74.09 E-value=8.7 Score=30.39 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=39.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYV 147 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~ 147 (219)
+....+++|..+-..--+ ...+.+|++|.+.+...+++|+. ....+.+||++-
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 43 PVVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred heeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 446778888876443333 67899999999999988777753 456789999873
No 206
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=73.94 E-value=12 Score=28.81 Aligned_cols=114 Identities=11% Similarity=0.148 Sum_probs=70.2
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEec--
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFN-- 171 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~-- 171 (219)
....+++|..+-..-.+ +..+.+|++|.+.+. .+.+|+ .....+.+||++-.| ..+..... +++.++.+-.
T Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~~--~~~~~~A~--~~~~v~~i~~~~ 101 (220)
T 2fmy_A 28 REQRYSKKAILYTPNTE-RNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCTH--TRAFIQAM--EDTTILYTDIRN 101 (220)
T ss_dssp EEEEECTTCEEECTTCS-SCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEESC--SSSEEEES--SSEEEEEEEHHH
T ss_pred heeEeCCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCCc--cceEEEEc--CcEEEEEEeHHH
Confidence 45677888765433233 688999999999994 555664 345678999998762 23344443 4565555321
Q ss_pred -----CCCCccch----------------------------hchhh------hc--------CCCCCCHHHHHHHcCCCH
Q 027725 172 -----SQLPGTQS----------------------------IAATL------FT--------ATPPVPDNVLTKAFQVGT 204 (219)
Q Consensus 172 -----s~~pg~~~----------------------------~~~~l------f~--------~~~~~~~~vl~~af~~~~ 204 (219)
..+|.... ++..+ ++ -.-.++.+.|+..+|++.
T Consensus 102 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~sr 181 (220)
T 2fmy_A 102 FQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTTR 181 (220)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTSCH
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCcH
Confidence 12343211 00000 01 001588999999999999
Q ss_pred HHHHHHHhhc
Q 027725 205 KEIEKIKSKL 214 (219)
Q Consensus 205 ~~v~~l~~~~ 214 (219)
+.+.++.+++
T Consensus 182 ~tvsR~l~~l 191 (220)
T 2fmy_A 182 QTVSVLLNDF 191 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887765
No 207
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=73.48 E-value=7.4 Score=30.65 Aligned_cols=71 Identities=13% Similarity=0.099 Sum_probs=44.1
Q ss_pred EEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEE-EEEcCCCEEEECC---CC----eEEEEeCCCCCEEEE
Q 027725 96 RIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLIS-KTVKKGEIYVFPK---AL----VHFQKNNGDKPASVI 167 (219)
Q Consensus 96 ~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~-~~L~~GDv~~~P~---g~----~H~~~N~g~~~a~~l 167 (219)
...+++|..+-.--- ....+.+|++|.+.+...+.+|+... ..+ +||++-... +. .+...... +++.++
T Consensus 20 ~~~~~~ge~i~~~G~-~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIFNQWD-PQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEECTTC-CCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEEeCCC-CCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 356677776533222 36789999999999988877775433 445 899885432 22 34444443 456655
Q ss_pred EE
Q 027725 168 SA 169 (219)
Q Consensus 168 ~~ 169 (219)
.+
T Consensus 97 ~i 98 (238)
T 2bgc_A 97 VI 98 (238)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 208
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=73.34 E-value=7.1 Score=30.20 Aligned_cols=52 Identities=21% Similarity=0.326 Sum_probs=38.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~ 146 (219)
+....+++|..+-..-.+ ...+.+|++|.+.+...+++|+. ....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 455678888876443333 67899999999999887777753 34678999987
No 209
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=72.71 E-value=6 Score=30.86 Aligned_cols=118 Identities=12% Similarity=0.118 Sum_probs=67.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEEEC-----CCCeEEEEeCCCCCEEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYVFP-----KALVHFQKNNGDKPASVI 167 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~~P-----~g~~H~~~N~g~~~a~~l 167 (219)
.....+++|..+-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++-.. ....+.... .+++.++
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A--~~~~~v~ 109 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIA--VENSKVL 109 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEE--SSCEEEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEE--ecceEEE
Confidence 455678888865433333 6789999999999987665553 345688999987321 122333443 3445555
Q ss_pred EEec-------CCCCccch----------------------------hchhh------hc-------CCCCCCHHHHHHH
Q 027725 168 SAFN-------SQLPGTQS----------------------------IAATL------FT-------ATPPVPDNVLTKA 199 (219)
Q Consensus 168 ~~~~-------s~~pg~~~----------------------------~~~~l------f~-------~~~~~~~~vl~~a 199 (219)
.+-. ..+|.... ++..+ ++ -.-.++.+.|+..
T Consensus 110 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~ 189 (232)
T 2gau_A 110 AIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELATL 189 (232)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHH
T ss_pred EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHHHH
Confidence 4321 12332110 01111 11 0125889999999
Q ss_pred cCCCHHHHHHHHhhc
Q 027725 200 FQVGTKEIEKIKSKL 214 (219)
Q Consensus 200 f~~~~~~v~~l~~~~ 214 (219)
+|++.+.+.++.+++
T Consensus 190 lg~sr~tvsR~l~~l 204 (232)
T 2gau_A 190 SNMTVSNAIRTLSTF 204 (232)
T ss_dssp TTSCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHH
Confidence 999999999887765
No 210
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=72.49 E-value=22 Score=27.37 Aligned_cols=115 Identities=11% Similarity=0.067 Sum_probs=70.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEec-
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYVFPKALVHFQKNNGDKPASVISAFN- 171 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~~~- 171 (219)
+....+++|..+-..-.+ ...+++|++|.+.+. .+++|+. ....+.+||++- ....+..... +++.++.+-.
T Consensus 23 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~~ 96 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADIR 96 (222)
T ss_dssp CEEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECHH
T ss_pred CcEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeHH
Confidence 345677888765433333 678999999999996 5556653 356789999987 3334444443 4566555321
Q ss_pred ------CCCCccch----------------------------hchhh------hcC--------CCCCCHHHHHHHcCCC
Q 027725 172 ------SQLPGTQS----------------------------IAATL------FTA--------TPPVPDNVLTKAFQVG 203 (219)
Q Consensus 172 ------s~~pg~~~----------------------------~~~~l------f~~--------~~~~~~~vl~~af~~~ 203 (219)
..+|.... ++..+ ++. .-.++.+.|+..+|++
T Consensus 97 ~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~s 176 (222)
T 1ft9_A 97 TFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSS 176 (222)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSC
T ss_pred HHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 12343221 01111 010 0147899999999999
Q ss_pred HHHHHHHHhhc
Q 027725 204 TKEIEKIKSKL 214 (219)
Q Consensus 204 ~~~v~~l~~~~ 214 (219)
.+.+.+..+++
T Consensus 177 r~tvsR~l~~L 187 (222)
T 1ft9_A 177 RQTTSTALNSL 187 (222)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887765
No 211
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=72.30 E-value=6.9 Score=30.06 Aligned_cols=48 Identities=17% Similarity=0.276 Sum_probs=34.6
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....+.||..+-..-.+ +..+.+|++|++.+. ..+|+ ...+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~--~~~g~--~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVL--TKGNK--EMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEE--CTTSC--CEEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEE--ECCCe--EEEEcCCCEe
Confidence 455678888876443333 678999999999885 34555 3478999987
No 212
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=72.16 E-value=10 Score=29.95 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=71.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEEE--CCCCeEEEEeCCCCCEEEEEEe
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYVF--PKALVHFQKNNGDKPASVISAF 170 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~~--P~g~~H~~~N~g~~~a~~l~~~ 170 (219)
.....+++|..+-.---+ ...+.+|++|.+.+...+++|+. ....+.+||++-. .....+.... .+++.++.+-
T Consensus 32 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A--~~~~~v~~i~ 108 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATA--MEPTRTCWFS 108 (250)
T ss_dssp SEEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEE--SSSEEEEEEC
T ss_pred CeEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEE--cccEEEEEEc
Confidence 345677888765443333 67899999999999988777753 4467899998743 2222233333 3455555531
Q ss_pred c-------CCCCccch----------------------------hchhh------hcC--------CCCCCHHHHHHHcC
Q 027725 171 N-------SQLPGTQS----------------------------IAATL------FTA--------TPPVPDNVLTKAFQ 201 (219)
Q Consensus 171 ~-------s~~pg~~~----------------------------~~~~l------f~~--------~~~~~~~vl~~af~ 201 (219)
. ..+|.... ++..+ ++. ...++.+.++..+|
T Consensus 109 ~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~lG 188 (250)
T 3e6c_C 109 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITG 188 (250)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHHT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHhC
Confidence 1 12333211 01111 110 12578999999999
Q ss_pred CCHHHHHHHHhhc
Q 027725 202 VGTKEIEKIKSKL 214 (219)
Q Consensus 202 ~~~~~v~~l~~~~ 214 (219)
++.+.+.++.+++
T Consensus 189 ~sr~tvsR~l~~L 201 (250)
T 3e6c_C 189 VHHVTVSRVLASL 201 (250)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 9999999887765
No 213
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=71.92 E-value=8.3 Score=32.04 Aligned_cols=52 Identities=17% Similarity=0.272 Sum_probs=38.9
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....+++|..+-.--.+ +..+.+|++|.+.+...+.+|+.....+.+||++
T Consensus 36 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 36 VQPLRAAAGQVLLRQGEP-AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp CEEEEECTTCEEECTTSB-CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCCc-CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 345677888765332233 6789999999999988877776567788999987
No 214
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=71.77 E-value=14 Score=29.81 Aligned_cols=52 Identities=17% Similarity=0.279 Sum_probs=38.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC--eEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD--KLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~--~~~~~~L~~GDv~ 146 (219)
+....+++|..+-..-.+ ++.+.+|++|++.+.....+| ......+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 456678888876544343 788999999999998765444 2456789999987
No 215
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=70.77 E-value=7.8 Score=29.56 Aligned_cols=115 Identities=16% Similarity=0.208 Sum_probs=68.5
Q ss_pred EEEEcCCCcCCCCCCCCC--cEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEEE----CCCCeEEEEeCCCCCEEEEE
Q 027725 96 RIDYEAGGLNPPHTHPRA--TEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYVF----PKALVHFQKNNGDKPASVIS 168 (219)
Q Consensus 96 ~~~l~pg~~~~pH~H~~a--~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~~----P~g~~H~~~N~g~~~a~~l~ 168 (219)
...+++|..+-..-.+ . ..+.+|++|.+.+...+++|+. ....+.+||++-. .....+.... .+++.++.
T Consensus 7 ~~~~~~g~~i~~~g~~-~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A--~~~~~v~~ 83 (202)
T 2zcw_A 7 TVSFKAGDVILYPGVP-GPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEA--ATDVRLEP 83 (202)
T ss_dssp CEEECTTCEEECSBSC-CTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEE--SSCEEEEE
T ss_pred EEEECCCCEEECCCCC-CCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEE--cccEEEEE
Confidence 3466777765333233 5 6789999999999887777753 3467899998743 1122333333 34566665
Q ss_pred EecCC-CCccch----------------------------hchhhh--cC-----------CCCCCHHHHHHHcCCCHHH
Q 027725 169 AFNSQ-LPGTQS----------------------------IAATLF--TA-----------TPPVPDNVLTKAFQVGTKE 206 (219)
Q Consensus 169 ~~~s~-~pg~~~----------------------------~~~~lf--~~-----------~~~~~~~vl~~af~~~~~~ 206 (219)
+ ... .|.... ++..+. .. .-.++.+.|+..+|++.+.
T Consensus 84 i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 162 (202)
T 2zcw_A 84 L-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRET 162 (202)
T ss_dssp C-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHH
T ss_pred E-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHHH
Confidence 5 322 122110 011110 00 0137889999999999999
Q ss_pred HHHHHhhc
Q 027725 207 IEKIKSKL 214 (219)
Q Consensus 207 v~~l~~~~ 214 (219)
+.++.+++
T Consensus 163 vsR~l~~L 170 (202)
T 2zcw_A 163 VTKVIGEL 170 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887765
No 216
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=70.29 E-value=9.3 Score=29.31 Aligned_cols=117 Identities=9% Similarity=0.092 Sum_probs=70.6
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeE-EEEEEcCCCEEEEC-----CCC--eEEEEeCCCCCEEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKL-ISKTVKKGEIYVFP-----KAL--VHFQKNNGDKPASV 166 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~-~~~~L~~GDv~~~P-----~g~--~H~~~N~g~~~a~~ 166 (219)
....+++|...-..-.+ ...+.+|++|.+.+...+++|+. ....+.+||++.+. .+. .+.... .+++.+
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a--~~~~~~ 103 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEA--EKDTDL 103 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEE--SSCEEE
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEE--eeeeEE
Confidence 45677888765433333 68899999999999988777753 34677999996321 222 223333 345665
Q ss_pred EEEecC-------CCCccch----------------------------hchhh------hc-CCCCCCHHHHHHHcCCCH
Q 027725 167 ISAFNS-------QLPGTQS----------------------------IAATL------FT-ATPPVPDNVLTKAFQVGT 204 (219)
Q Consensus 167 l~~~~s-------~~pg~~~----------------------------~~~~l------f~-~~~~~~~~vl~~af~~~~ 204 (219)
+.+-.. .+|.... ++..+ .+ ..-.++.+.++..+|++.
T Consensus 104 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr 183 (220)
T 3dv8_A 104 WIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHR 183 (220)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCH
T ss_pred EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCH
Confidence 554211 2333111 00000 00 001578899999999999
Q ss_pred HHHHHHHhhc
Q 027725 205 KEIEKIKSKL 214 (219)
Q Consensus 205 ~~v~~l~~~~ 214 (219)
+.+.++.+++
T Consensus 184 ~tvsR~l~~L 193 (220)
T 3dv8_A 184 EVITRMLRYF 193 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887765
No 217
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=68.25 E-value=4.2 Score=35.92 Aligned_cols=23 Identities=17% Similarity=0.067 Sum_probs=20.4
Q ss_pred EEEEEEcCCCEEEECCCCeEEEE
Q 027725 135 LISKTVKKGEIYVFPKALVHFQK 157 (219)
Q Consensus 135 ~~~~~L~~GDv~~~P~g~~H~~~ 157 (219)
+....|++||.+++|+|.+|...
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 45678999999999999999975
No 218
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=63.42 E-value=21 Score=25.55 Aligned_cols=50 Identities=20% Similarity=0.327 Sum_probs=34.1
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVF 148 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~ 148 (219)
+....+++|..+-..--+ +..+.+|++|.+.+... +. ....+.+||++--
T Consensus 50 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~---~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 50 FQTVHCAPGDLIYHAGES-VDSLCFVVSGSLEVIQD---DE-VVAILGKGDVFGD 99 (160)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEET---TE-EEEEEETTCEEEC
T ss_pred ceeeeeCCCCEEEeCCCC-ccEEEEEEeeEEEEEEC---CE-EEEEecCCCEeCc
Confidence 344677787765433233 78999999999998652 22 3568899998743
No 219
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=63.02 E-value=8.9 Score=27.06 Aligned_cols=48 Identities=15% Similarity=0.244 Sum_probs=33.1
Q ss_pred EEEEEEc-CCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYE-AGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~-pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....++ +|..+-.. ...+..+.+|++|.+.+.. .+|+. ..+.+||++
T Consensus 39 ~~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILED-GQELDSWYVILNGTVEISH--PDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEECT-TCEECEEEECCBSCEEEEC--SSSCE--EEECTTCEE
T ss_pred heEEEecCCCCEEEeC-CCCCCeEEEEEeCEEEEEc--CCCcE--EEecCCCcc
Confidence 3456777 77655332 2236789999999999863 45663 668999976
No 220
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=61.86 E-value=14 Score=28.55 Aligned_cols=64 Identities=14% Similarity=0.173 Sum_probs=46.6
Q ss_pred CCCCCCCCcEEEEEEeeEEEEEEEccCC------eEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 106 PPHTHPRATEMIFVLEGELDVGFISTAD------KLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 106 ~pH~H~~a~E~~~Vl~G~~~v~~~~~~~------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..-.|+.++|.++=+.|...+.++.+++ +........|+.+.+-+|++|.-.-.-+++..++.+
T Consensus 70 ~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 70 ELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 3446888899999999986655554432 456788999999999999999964433455666644
No 221
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=61.30 E-value=61 Score=25.85 Aligned_cols=109 Identities=14% Similarity=0.120 Sum_probs=65.5
Q ss_pred EEEEEEEcCCC-cCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcC----CC--EEEECCCCeEEEEeC-CCCCE
Q 027725 93 SLSRIDYEAGG-LNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKK----GE--IYVFPKALVHFQKNN-GDKPA 164 (219)
Q Consensus 93 s~~~~~l~pg~-~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~----GD--v~~~P~g~~H~~~N~-g~~~a 164 (219)
+....-+.++. ...+|.- +++|+.+-..|.....+..++|+.....|.. |+ -++||+|....-+.. +.+..
T Consensus 80 TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~ 158 (203)
T 1xe7_A 80 TLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFD 158 (203)
T ss_dssp EEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTT
T ss_pred eEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcc
Confidence 44445567765 4555544 4999999999965555677777765666643 55 589999999887654 22221
Q ss_pred --EEEEEecCCCCccchhchhhhcCCCCCCHH-HHHHHcCCCHHHHHHHHh
Q 027725 165 --SVISAFNSQLPGTQSIAATLFTATPPVPDN-VLTKAFQVGTKEIEKIKS 212 (219)
Q Consensus 165 --~~l~~~~s~~pg~~~~~~~lf~~~~~~~~~-vl~~af~~~~~~v~~l~~ 212 (219)
.+++.. -.||+..-...+ .+.+ .|.+.|. +++++.|+-
T Consensus 159 ~~tLVgCt--VaPGFdF~dFel------~~~~~~L~~~~P--~~~~~~l~~ 199 (203)
T 1xe7_A 159 NGFLISEV--VVPGFDFEDHTF------LKGEDELKHLVG--PEKAAELAF 199 (203)
T ss_dssp TCEEEEEE--ESSCCCGGGEEE------CCHHHHHHHHHC--HHHHHHTGG
T ss_pred cceEEEEE--ecCCccchhcEe------cCCcHHHHHHCC--HHHHHHHHH
Confidence 233321 245654443333 2344 5555554 677776653
No 222
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=61.22 E-value=21 Score=25.17 Aligned_cols=48 Identities=10% Similarity=0.183 Sum_probs=33.8
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....+++|..+-.--.+ +..+.+|++|.+.+.- +|+ ....+.+||++
T Consensus 46 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~---~g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 46 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVF 93 (139)
T ss_dssp CEEEEECSSCEEECTTSC-CCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred cEEEecCCCCEEEeCCCc-CCEEEEEEeCEEEEEE---CCE-EEEEeCCCCEe
Confidence 355677888765433233 7889999999999843 444 35678999986
No 223
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=60.38 E-value=8.9 Score=33.13 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=27.6
Q ss_pred EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 135 LISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 135 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
++..+=++||.+++++|..|+..|.|-.-.+.+-+
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~ 312 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNV 312 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeEEEEEe
Confidence 45667799999999999999999998644444433
No 224
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=60.36 E-value=26 Score=30.47 Aligned_cols=51 Identities=6% Similarity=0.012 Sum_probs=37.5
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~ 146 (219)
+....+++|..+--.-.+ ++.+.+|++|.+.+.. ..+|+ .....+.+||++
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEE
Confidence 556788888876544444 7899999999999987 33453 345678999976
No 225
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=59.57 E-value=17 Score=31.67 Aligned_cols=54 Identities=22% Similarity=0.096 Sum_probs=39.6
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe---EEEEEEcCCCEEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK---LISKTVKKGEIYVF 148 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~---~~~~~L~~GDv~~~ 148 (219)
+....+++|..+-.--.+ +..+.+|++|.+.+.....+|+ .....+.+||++--
T Consensus 65 ~~~~~~~~g~~i~~~Gd~-~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeCCCC-CCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 445678888765433233 6889999999999988776663 45678999998743
No 226
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=58.90 E-value=17 Score=28.29 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=46.2
Q ss_pred CCCCCCCCcEEEEEEeeEEEEEEEccCC------eEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 106 PPHTHPRATEMIFVLEGELDVGFISTAD------KLISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 106 ~pH~H~~a~E~~~Vl~G~~~v~~~~~~~------~~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
..-.|+.++|.++=+.|...+.++.+++ +........|+.+.+-+|++|.-.-.-+++..++++
T Consensus 72 ~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vv 141 (175)
T 2bdr_A 72 MLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVV 141 (175)
T ss_dssp EEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEE
Confidence 3456888999999999986555554443 456889999999999999999653333345555544
No 227
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=58.86 E-value=27 Score=25.13 Aligned_cols=48 Identities=17% Similarity=0.315 Sum_probs=34.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....+++|..+-..-.+ ...+.+|++|.+.+.. +++. ...+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~---~~~~-~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYV---NNEW-ATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESCEEEEE---TTEE-EEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEE---CCEE-EEEecCCCEe
Confidence 445678888876443333 7899999999999875 3442 4568999986
No 228
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=57.58 E-value=8.5 Score=34.48 Aligned_cols=23 Identities=17% Similarity=0.079 Sum_probs=20.1
Q ss_pred EEEEEcCCCEEEECCCCeEEEEe
Q 027725 136 ISKTVKKGEIYVFPKALVHFQKN 158 (219)
Q Consensus 136 ~~~~L~~GDv~~~P~g~~H~~~N 158 (219)
....|++||.+++|+|.+|....
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCC
Confidence 35679999999999999999854
No 229
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=53.90 E-value=26 Score=28.33 Aligned_cols=52 Identities=19% Similarity=0.381 Sum_probs=37.0
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEc-cCCe-EEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFIS-TADK-LISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~-~~~~-~~~~~L~~GDv~ 146 (219)
+....+++|..+-.--- .+..+.+|++|++.+.... .+|+ .....+.+||++
T Consensus 180 ~~~~~~~~g~~I~~~G~-~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQGA-RGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECTTC-EECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeCCC-CCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 35567788876543323 3688999999999998776 3443 345689999987
No 230
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=53.20 E-value=13 Score=26.12 Aligned_cols=45 Identities=22% Similarity=0.349 Sum_probs=31.8
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
....+++|..+-..-.+ ...+.+|++|.+.+...+ ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~------~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATPN------PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSSS------CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeCC------cceECCCCEe
Confidence 45678888876443333 688999999999985432 2467888875
No 231
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=52.02 E-value=38 Score=28.38 Aligned_cols=66 Identities=14% Similarity=0.075 Sum_probs=45.5
Q ss_pred ceEEEEEEEcCCCcCC-CCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEE-------EEeCCCC
Q 027725 91 GVSLSRIDYEAGGLNP-PHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHF-------QKNNGDK 162 (219)
Q Consensus 91 gis~~~~~l~pg~~~~-pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~-------~~N~g~~ 162 (219)
|.....+.+.||.... .-.|+ --|=+|+++|.+ ..|+.++-|+|+.|- -.- ++.
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHd-y~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~-Se~ 277 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQP-YNEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHI-TDD 277 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEEC-SCEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEE-ESS
T ss_pred CCeEEEEEECCCCCCCCceeec-cceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcC-cCC
Confidence 4566677888886543 33466 566699999986 348999999999998 332 356
Q ss_pred CEEEEEEecCCC
Q 027725 163 PASVISAFNSQL 174 (219)
Q Consensus 163 ~a~~l~~~~s~~ 174 (219)
.+.++.-.+.+.
T Consensus 278 G~l~fvR~DgdL 289 (303)
T 2qdr_A 278 GGLFFVRVDRDL 289 (303)
T ss_dssp CEEEEEEESSCT
T ss_pred ceEEEEEeCccc
Confidence 677776655443
No 232
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=50.86 E-value=52 Score=27.73 Aligned_cols=66 Identities=17% Similarity=0.159 Sum_probs=41.0
Q ss_pred EEEcCCCcCCCC-CCCCCcEE-EEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEEE-EeCC-CCCEEEEE
Q 027725 97 IDYEAGGLNPPH-THPRATEM-IFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHFQ-KNNG-DKPASVIS 168 (219)
Q Consensus 97 ~~l~pg~~~~pH-~H~~a~E~-~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~~-~N~g-~~~a~~l~ 168 (219)
++|+.+....-. .-. ..|+ ++.+.|.+++.+.+ + .+.|..-|.+++|+|.-... .... ..++++..
T Consensus 62 l~L~~~~~~~~~~fl~-~rE~~iV~lgG~~~V~vdg---~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav 131 (289)
T 1ywk_A 62 LEIILDKELGVDYFLE-RRELGVINIGGPGFIEIDG---A--KETMKKQDGYYIGKETKHVRFSSENPDNPAKFYI 131 (289)
T ss_dssp EECCCSGGGTSSSTTT-TEEEEEEECSSCEEEEETT---E--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEE
T ss_pred EEcCCCceecccccCC-CcEEEEEEccCeEEEEECC---E--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEE
Confidence 456655544333 334 4555 55567899888744 4 56899999999999976443 3322 34555544
No 233
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=50.11 E-value=29 Score=26.80 Aligned_cols=49 Identities=14% Similarity=0.227 Sum_probs=34.5
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....+++|..+-..--+ +..+.+|.+|++.+..... + ....+.+||++
T Consensus 148 ~~~~~~~~g~~i~~~g~~-~~~~y~I~~G~v~v~~~~~-~--~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIREGDQ-GENFYLIEYGAVDVSKKGQ-G--VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEEETTT-E--EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeCCCc-CCEEEEEEecEEEEEEcCC-c--eEEEcCCCCcc
Confidence 455677888765443333 7889999999999875432 2 35788999976
No 234
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=49.85 E-value=5.4 Score=30.92 Aligned_cols=52 Identities=10% Similarity=0.273 Sum_probs=36.3
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCe-EEEEEEcCCCEEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADK-LISKTVKKGEIYV 147 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~-~~~~~L~~GDv~~ 147 (219)
....+++|..+-..-.+ ...+.+|++|.+.+...+++|+ .....+.+||++-
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 85 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 85 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEES
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 44567777765443333 6889999999999887665553 2345678999874
No 235
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=49.05 E-value=22 Score=27.24 Aligned_cols=49 Identities=14% Similarity=0.206 Sum_probs=35.2
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYV 147 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~ 147 (219)
+....+.||..+-..--+ +..+.+|++|++.+.. +|. ....+.+||++-
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~---~~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLK---DNT-VLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEES---SSC-EEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEE---CCe-EEEEecCCCCcC
Confidence 455678888876443333 7899999999998864 233 357899999874
No 236
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=46.20 E-value=44 Score=26.66 Aligned_cols=48 Identities=17% Similarity=0.307 Sum_probs=35.4
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....+++|..+-..-.+ ++.+.+|++|++.+.. +|+ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~---~g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYV---NNE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEEE---TTE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEE---CCe-EEEEcCCCCcc
Confidence 455678888876443333 7889999999999876 343 36788999987
No 237
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=45.83 E-value=20 Score=32.70 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=27.1
Q ss_pred EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 135 LISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 135 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
++..+=++||.+++++|..||.+|.|-.--+.+-+
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNv 346 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNV 346 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecCeeeeeEEEe
Confidence 34667799999999999999999998644443333
No 238
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=45.12 E-value=30 Score=31.77 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=27.6
Q ss_pred EEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEE
Q 027725 135 LISKTVKKGEIYVFPKALVHFQKNNGDKPASVISA 169 (219)
Q Consensus 135 ~~~~~L~~GDv~~~P~g~~H~~~N~g~~~a~~l~~ 169 (219)
++..+=++||.+++++|..|+..|.|-.-.+.+-+
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~ 371 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNV 371 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeeeEEEe
Confidence 34677799999999999999999999644444433
No 239
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=42.94 E-value=34 Score=28.77 Aligned_cols=52 Identities=10% Similarity=0.089 Sum_probs=34.5
Q ss_pred CcEE-EEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEE-EEeC-CCCCEEEEEE
Q 027725 113 ATEM-IFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHF-QKNN-GDKPASVISA 169 (219)
Q Consensus 113 a~E~-~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~-~~N~-g~~~a~~l~~ 169 (219)
..|+ ++.+.|.+++.+.+ + .+.|..-|.+++|+|.-.. +... +..++++...
T Consensus 78 ~rE~~iV~l~G~~~V~vdG---~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~ 132 (282)
T 1xru_A 78 RRELGVINIGGAGTITVDG---Q--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYN 132 (282)
T ss_dssp TEEEEEEECSSCEEEEETT---E--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEE
T ss_pred CcEEEEEEccCeEEEEECC---E--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEE
Confidence 4554 55667899888744 4 5689999999999999644 4333 2345555443
No 240
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=40.54 E-value=29 Score=26.77 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=33.6
Q ss_pred EEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 95 SRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 95 ~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
....+++|..+-..-.+ ++.+.+|++|++.+.. +++. ...+.+||++
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~---~~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYV---NDNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEES---TTSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEE---CCEE-EEecCCCCee
Confidence 45677788765433344 7899999999999864 2332 4688999987
No 241
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=36.98 E-value=56 Score=28.32 Aligned_cols=52 Identities=13% Similarity=0.226 Sum_probs=34.3
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccC------Ce-EEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTA------DK-LISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~------~~-~~~~~L~~GDv~ 146 (219)
+....+.+|..+-.--.+ +..+.+|++|++.+.....+ |+ .....+.+||++
T Consensus 290 l~~~~~~~Ge~I~~eGd~-~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQGDL-ADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 455677888765433333 78999999999999765543 32 235678999986
No 242
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=36.41 E-value=35 Score=27.10 Aligned_cols=36 Identities=6% Similarity=0.112 Sum_probs=27.2
Q ss_pred CcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCC
Q 027725 113 ATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKAL 152 (219)
Q Consensus 113 a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~ 152 (219)
..-++|+++|++.+...+ ++ ...|.+||.+++-...
T Consensus 140 ~~~~v~~l~G~~~v~~~~--~~--~~~L~~~d~l~~~~~~ 175 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQG--QP--RGQLAAHDCLCAEGLQ 175 (200)
T ss_dssp SEEEEEESSSCEEEEETT--EE--EEEECTTCEEEEESCC
T ss_pred CEEEEEEccCcEEEEcCC--Cc--eeecCCCCEEEEeCCC
Confidence 467999999999886531 22 6789999999986543
No 243
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=36.07 E-value=52 Score=28.06 Aligned_cols=49 Identities=12% Similarity=0.234 Sum_probs=33.7
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC--eEEEEEEcCCCEE
Q 027725 97 IDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD--KLISKTVKKGEIY 146 (219)
Q Consensus 97 ~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~--~~~~~~L~~GDv~ 146 (219)
..+++|..+-.--.+ +..+.+|++|++.+.....++ ......+.+||++
T Consensus 274 ~~~~~ge~I~~eGd~-~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGEP-GDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTSB-CCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 456666655433333 788999999999998765443 2335789999987
No 244
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=35.49 E-value=50 Score=26.54 Aligned_cols=49 Identities=10% Similarity=0.157 Sum_probs=35.6
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYV 147 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~ 147 (219)
+....+++|..+--.-.+ ++.+.+|++|.+.+.. +|+ ....+.+||++-
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~---~g~-~~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK---EGV-KLCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEE---TTE-EEEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEE---CCE-EEEEeCCCCeee
Confidence 455788888876544444 7889999999999843 344 356799999873
No 245
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=34.67 E-value=78 Score=30.74 Aligned_cols=53 Identities=23% Similarity=0.137 Sum_probs=39.0
Q ss_pred EEEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCC---eEEEEEEcCCCEE
Q 027725 93 SLSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTAD---KLISKTVKKGEIY 146 (219)
Q Consensus 93 s~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~---~~~~~~L~~GDv~ 146 (219)
.+....+++|-.+---=.+ ++.+.+|++|++.+.+..+++ ......+.+||.|
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~-gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDI-GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp HCEEEEECTTCEEECTTSC-CCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred heEEEEECCCCEEEcCCCc-CCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 4666788888876444455 899999999999998764332 3345789999987
No 246
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=33.73 E-value=6.6 Score=27.72 Aligned_cols=48 Identities=15% Similarity=0.259 Sum_probs=28.6
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEE---EEEEcCCCEE
Q 027725 97 IDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLI---SKTVKKGEIY 146 (219)
Q Consensus 97 ~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~---~~~L~~GDv~ 146 (219)
..+++|..+-.. ......+.+|++|++++. ...+|+.. ...+.+||++
T Consensus 32 ~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 32 CLFTEKSYLVRE-GDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCBCTTEEEECT-TSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred EEeCCCCEEEeC-CCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 345555543222 223678999999999954 44445421 1277888865
No 247
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=31.94 E-value=2.3e+02 Score=24.67 Aligned_cols=72 Identities=19% Similarity=0.199 Sum_probs=49.8
Q ss_pred EEEEcC---------CCEEEECCCCeEEEEeCCCCCEEEEEEecCCCCc-------------cch--------------h
Q 027725 137 SKTVKK---------GEIYVFPKALVHFQKNNGDKPASVISAFNSQLPG-------------TQS--------------I 180 (219)
Q Consensus 137 ~~~L~~---------GDv~~~P~g~~H~~~N~g~~~a~~l~~~~s~~pg-------------~~~--------------~ 180 (219)
...|++ ||..+-|.-.+|...-.++.|+++++--..++-. +.. +
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 456777 9999999999999999999999988754433311 000 0
Q ss_pred chhhhcCCCCCCHHHHHHHcCCCHHHHHHH
Q 027725 181 AATLFTATPPVPDNVLTKAFQVGTKEIEKI 210 (219)
Q Consensus 181 ~~~lf~~~~~~~~~vl~~af~~~~~~v~~l 210 (219)
...+-.. +++.+-|++..|++.+.+..+
T Consensus 236 R~ar~Re--glTQ~~LAe~TGIPq~hISeM 263 (443)
T 3g7d_A 236 DLFLARR--AHTRTSAAEAAGVPPADLEAA 263 (443)
T ss_dssp HHHHHHT--TCCHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHhc--CCCHHHHHHHhCCCHHHHHHH
Confidence 0111122 688888888888888777654
No 248
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=29.25 E-value=1.3e+02 Score=25.84 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=33.4
Q ss_pred EEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 97 IDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 97 ~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
..+++|..+-..-.+ +..+.+|++|++.+...+ +.....+.+||++
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~~---~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIYG---KGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEETT---TEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEcC---CeeEEEecCCCEE
Confidence 467888866444343 789999999999987532 2246788999976
No 249
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=28.14 E-value=79 Score=17.31 Aligned_cols=27 Identities=7% Similarity=0.009 Sum_probs=23.7
Q ss_pred CCCHHHHHHHcCCCHHHHHHHHhhcCC
Q 027725 190 PVPDNVLTKAFQVGTKEIEKIKSKLAP 216 (219)
Q Consensus 190 ~~~~~vl~~af~~~~~~v~~l~~~~~~ 216 (219)
+++...+++.++++..+|.+..+.+..
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~~~ 47 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDPVS 47 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCSTT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhHHh
Confidence 689999999999999999998877653
No 250
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=28.04 E-value=1.1e+02 Score=22.65 Aligned_cols=54 Identities=15% Similarity=0.062 Sum_probs=38.8
Q ss_pred CCCCCCCCCcEEEEEEeeEEEEEEEccC--------------------C-eEEEEEEcCCCEEEECCCCeEEEEe
Q 027725 105 NPPHTHPRATEMIFVLEGELDVGFISTA--------------------D-KLISKTVKKGEIYVFPKALVHFQKN 158 (219)
Q Consensus 105 ~~pH~H~~a~E~~~Vl~G~~~v~~~~~~--------------------~-~~~~~~L~~GDv~~~P~g~~H~~~N 158 (219)
..+-.|.+--.+-|+++|+=++++.... + ......|++|+.++|-++-+|....
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 3455676678999999998887776311 0 1124678999999999999998743
No 251
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=27.15 E-value=64 Score=29.08 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=36.4
Q ss_pred EEEEcCCCcCCCCCCCC-CcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCCCeEE
Q 027725 96 RIDYEAGGLNPPHTHPR-ATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKALVHF 155 (219)
Q Consensus 96 ~~~l~pg~~~~pH~H~~-a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g~~H~ 155 (219)
|....++.+.+|-+|.+ .+|+++.+.|.-.. | ..-+.+|.+-+-|.+.+|-
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a-------k--~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA-------K--QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC-----------------CCTTCEEEECTTCCBC
T ss_pred ccCCCCCccCCCCCccchhhhhhhhccccccc-------c--ccCcCCCceeccCCCcCCC
Confidence 44677888889988955 66999999998543 1 2248999999999999995
No 252
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=25.50 E-value=47 Score=18.78 Aligned_cols=21 Identities=10% Similarity=0.273 Sum_probs=17.3
Q ss_pred CCHHHHHHHcCCCHHHHHHHH
Q 027725 191 VPDNVLTKAFQVGTKEIEKIK 211 (219)
Q Consensus 191 ~~~~vl~~af~~~~~~v~~l~ 211 (219)
++++.-++.|+++.++..+|.
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP 21 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLP 21 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCCCHHHHHHCc
Confidence 467888899999999988764
No 253
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.41 E-value=51 Score=22.55 Aligned_cols=29 Identities=17% Similarity=0.452 Sum_probs=23.9
Q ss_pred hhhhcCCCCCCHHHHHHHcCCCHHHHHHHHhh
Q 027725 182 ATLFTATPPVPDNVLTKAFQVGTKEIEKIKSK 213 (219)
Q Consensus 182 ~~lf~~~~~~~~~vl~~af~~~~~~v~~l~~~ 213 (219)
..+|- .+++|+|..-|+++.-+++|+.+-
T Consensus 47 G~lL~---~L~ee~L~edf~ls~Lq~kKi~~f 75 (84)
T 2dkz_A 47 GNLLV---QLTEEILSEDFKLSKLQVKKIMQF 75 (84)
T ss_dssp HHHHH---HCCHHHHHHTSCCCHHHHHHHHHH
T ss_pred hHHHH---hCCHHHHHhhcCCCHHHHHHHHHH
Confidence 45555 599999999999999999998764
No 254
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=24.28 E-value=57 Score=27.77 Aligned_cols=48 Identities=17% Similarity=0.224 Sum_probs=35.9
Q ss_pred EEEEEEcCCCcCCCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEE
Q 027725 94 LSRIDYEAGGLNPPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIY 146 (219)
Q Consensus 94 ~~~~~l~pg~~~~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~ 146 (219)
+....+++|..+--.-.+ ++.+.+|++|++.+.. +++ ....+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~---~~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYV---NGE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEE---TTE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEE---CCe-EeeeCCCCCEE
Confidence 556788888876555444 7889999999999975 344 24678999986
No 255
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=23.93 E-value=1.8e+02 Score=20.21 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=16.4
Q ss_pred cCCeEEEEEEcCCCEEEECCC
Q 027725 131 TADKLISKTVKKGEIYVFPKA 151 (219)
Q Consensus 131 ~~~~~~~~~L~~GDv~~~P~g 151 (219)
.+|+.....++.||.++|++|
T Consensus 50 ~~G~~~p~~VkvGD~Vlf~k~ 70 (97)
T 1pcq_O 50 ENGEVKPLDVKVGDIVIFNDG 70 (97)
T ss_dssp TSSSCEECSCCTTCEEEECCC
T ss_pred CCCCEEecccCCCCEEEECCc
Confidence 356655667999999999993
No 256
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=23.60 E-value=53 Score=18.79 Aligned_cols=21 Identities=5% Similarity=0.257 Sum_probs=18.3
Q ss_pred CCHHHHHHHcCCCHHHHHHHH
Q 027725 191 VPDNVLTKAFQVGTKEIEKIK 211 (219)
Q Consensus 191 ~~~~vl~~af~~~~~~v~~l~ 211 (219)
++++--++.|+++.++..+|.
T Consensus 3 Lsd~dF~~vFgmsr~eF~~LP 23 (37)
T 1und_A 3 LSEQDFVSVFGITRGQFAALP 23 (37)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCcCHHHHHHCh
Confidence 678889999999999998764
No 257
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=23.57 E-value=98 Score=23.65 Aligned_cols=47 Identities=23% Similarity=0.295 Sum_probs=30.3
Q ss_pred EEEEEEEcCCCcC-CCCCCCCCcEEEEEEeeEEEEEEEccCCeEEEEEEcCCCEEEECCC
Q 027725 93 SLSRIDYEAGGLN-PPHTHPRATEMIFVLEGELDVGFISTADKLISKTVKKGEIYVFPKA 151 (219)
Q Consensus 93 s~~~~~l~pg~~~-~pH~H~~a~E~~~Vl~G~~~v~~~~~~~~~~~~~L~~GDv~~~P~g 151 (219)
.+.++++..|..+ .-..|+ +++.+|.-..+.- ...|++||.+.+|++
T Consensus 75 ~~~~I~t~~G~~I~~T~~H~-----~~v~~~g~~~~~~-------A~eLk~GD~v~v~~~ 122 (185)
T 2lcj_A 75 HLIRFELEDGRSFETTVDHP-----VLVYENGRFIEKR-------AFEVKEGDKVLVSEL 122 (185)
T ss_dssp CEEEEEETTSCEEEECSSSE-----EEEEETTEEEEEE-------GGGCCTTCEEEECCC
T ss_pred eEEEEEECCCCEEEECCCCE-----EEEecCCeEEEEE-------HHHCCCCCEEEEccc
Confidence 3677788777643 455677 7777653222221 336999999999973
Done!