Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>027728
MTSIIPGHQFNWSVGVEEHHLHRARFNKIIPYSRYFGSNFPYKGLFSSHDKHISGCGPIF
CSAVDDGNDPDDGSGDDTSNKKESPKDENGVNSELLRENLERIVGVDDSTFSGLDLATLI
RKKYGRSYDVQLIKKFMGRNLLALNVMWKYMEQRSFPLTEEEYILRLDDVANTLKCWGAV
SHIRNSLAKLKERPRIGKAVSIFIDMDESGGRANEWIYK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027728
        (219 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2092261 - symbol:AT3G19900 "AT3G19900" species...   566  7.8e-55   1


>TAIR|locus:2092261 [details] [associations]
            symbol:AT3G19900 "AT3G19900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=IDA] GO:GO:0009507 EMBL:CP002686 EMBL:AY085994
            EMBL:BT000906 EMBL:AK317379 IPI:IPI00519032 RefSeq:NP_566650.1
            UniGene:At.44802 ProteinModelPortal:Q8LDI1 SMR:Q8LDI1 STRING:Q8LDI1
            PaxDb:Q8LDI1 PRIDE:Q8LDI1 EnsemblPlants:AT3G19900.1 GeneID:821528
            KEGG:ath:AT3G19900 eggNOG:NOG86172 OMA:NDMNRAN
            ProtClustDB:CLSN2688580 ArrayExpress:Q8LDI1 Genevestigator:Q8LDI1
            InterPro:IPR021420 Pfam:PF11267 Uniprot:Q8LDI1
        Length = 222

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 112/141 (79%), Positives = 125/141 (88%)

Query:    81 KKESPKDENGVNS-ELLRENLERIVGVDDSTFSGLDLATLIRKKYGRSYDVQLIKK-FMG 138
             +KES  D+    + ++ R NLER+VG DDS F+GLDLATLIR+KYG+SYDVQLIKK FMG
Sbjct:    82 EKESLDDKTKRQANDMNRANLERMVGSDDSAFNGLDLATLIRQKYGKSYDVQLIKKEFMG 141

Query:   139 RNLLALNVMWKYMEQRSFPLTEEEYILRLDDVANTLKCWGAVSHIRNSLAKLKERPRIGK 198
             +NLLA+NVMWKY EQRSFPLTEEEYILRLDDVAN LKCWGAVSHIR+SLAK KERPRIGK
Sbjct:   142 KNLLAMNVMWKYREQRSFPLTEEEYILRLDDVANMLKCWGAVSHIRSSLAKSKERPRIGK 201

Query:   199 AVSIFIDMDESGGRANEWIYK 219
             AVSIFIDMD +GGRANEWIYK
Sbjct:   202 AVSIFIDMDSTGGRANEWIYK 222


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      219       206   0.00097  111 3  11 22  0.49    32
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  189 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.81u 0.12s 18.93t   Elapsed:  00:00:01
  Total cpu time:  18.81u 0.12s 18.93t   Elapsed:  00:00:01
  Start:  Sat May 11 06:44:35 2013   End:  Sat May 11 06:44:36 2013

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