Query 027731
Match_columns 219
No_of_seqs 193 out of 1365
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 00:35:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027731.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027731hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nwy_A Uridylate kinase; allos 100.0 3.8E-44 1.3E-48 299.6 22.8 205 2-207 76-280 (281)
2 3ek6_A Uridylate kinase; UMPK 100.0 2.3E-43 7.9E-48 290.3 22.1 206 2-208 36-241 (243)
3 1ybd_A Uridylate kinase; alpha 100.0 7.5E-43 2.6E-47 286.7 23.8 206 2-208 34-239 (239)
4 4a7w_A Uridylate kinase; trans 100.0 1.8E-42 6.1E-47 284.6 22.8 205 2-207 34-240 (240)
5 2a1f_A Uridylate kinase; PYRH, 100.0 2E-42 7E-47 285.5 22.1 206 2-208 35-240 (247)
6 1z9d_A Uridylate kinase, UK, U 100.0 6.7E-42 2.3E-46 283.2 23.1 208 2-210 34-242 (252)
7 2va1_A Uridylate kinase; UMPK, 100.0 8.8E-42 3E-46 283.1 21.3 204 2-207 51-255 (256)
8 2jjx_A Uridylate kinase, UMP k 100.0 5.8E-40 2E-44 272.0 23.7 208 2-210 39-248 (255)
9 2j4j_A Uridylate kinase; trans 100.0 3.3E-39 1.1E-43 263.0 20.8 193 2-208 22-225 (226)
10 2brx_A Uridylate kinase; UMP k 100.0 5.6E-38 1.9E-42 258.5 17.7 192 2-208 43-244 (244)
11 2ij9_A Uridylate kinase; struc 100.0 2.8E-36 9.6E-41 244.5 19.0 189 2-207 21-219 (219)
12 2j5v_A Glutamate 5-kinase; pro 100.0 2.1E-35 7.3E-40 255.6 22.1 206 2-212 30-261 (367)
13 2ogx_A Molybdenum storage prot 100.0 1.8E-34 6.1E-39 241.5 20.7 197 2-209 60-272 (276)
14 3ll9_A Isopentenyl phosphate k 100.0 2.7E-34 9.4E-39 239.5 17.3 200 2-207 31-266 (269)
15 2ako_A Glutamate 5-kinase; str 100.0 5.9E-34 2E-38 235.4 17.7 200 2-207 26-251 (251)
16 2ap9_A NAG kinase, acetylgluta 100.0 4.5E-33 1.5E-37 235.6 21.3 205 2-210 45-292 (299)
17 2ogx_B Molybdenum storage prot 100.0 2.3E-32 8E-37 228.0 23.0 195 2-208 58-269 (270)
18 2rd5_A Acetylglutamate kinase- 100.0 1.4E-32 4.8E-37 232.4 20.4 203 2-208 56-298 (298)
19 3ll5_A Gamma-glutamyl kinase r 100.0 2.9E-33 9.9E-38 230.9 15.4 188 13-207 38-249 (249)
20 2egx_A Putative acetylglutamat 100.0 3E-32 1E-36 227.3 19.0 200 2-207 16-269 (269)
21 2v5h_A Acetylglutamate kinase; 100.0 4.5E-32 1.6E-36 231.3 19.1 205 2-210 69-312 (321)
22 3k4o_A Isopentenyl phosphate k 100.0 1.9E-32 6.6E-37 227.9 13.1 194 2-209 34-265 (266)
23 2bty_A Acetylglutamate kinase; 100.0 5.7E-31 1.9E-35 221.0 19.5 200 2-209 41-280 (282)
24 3l76_A Aspartokinase; alloster 100.0 5E-31 1.7E-35 241.1 20.5 199 2-211 21-247 (600)
25 3ab4_A Aspartokinase; aspartat 100.0 1.7E-30 5.8E-35 229.2 22.3 198 2-209 21-244 (421)
26 2buf_A Acetylglutamate kinase; 100.0 1.7E-30 5.8E-35 219.8 20.8 202 2-210 46-298 (300)
27 3d40_A FOMA protein; fosfomyci 100.0 4.9E-32 1.7E-36 227.8 10.3 201 2-209 51-283 (286)
28 1gs5_A Acetylglutamate kinase; 100.0 9.9E-30 3.4E-34 210.8 17.1 198 2-207 22-257 (258)
29 2we5_A Carbamate kinase 1; arg 100.0 1.1E-29 3.7E-34 215.8 17.3 200 2-207 30-309 (310)
30 2e9y_A Carbamate kinase; trans 100.0 3.7E-29 1.3E-33 213.0 18.7 200 2-208 34-315 (316)
31 1e19_A Carbamate kinase-like c 100.0 5E-28 1.7E-32 205.7 18.3 200 2-208 32-314 (314)
32 3l86_A Acetylglutamate kinase; 100.0 7.1E-28 2.4E-32 201.1 17.5 187 2-208 54-278 (279)
33 3zzh_A Acetylglutamate kinase; 100.0 6.1E-28 2.1E-32 203.7 16.4 200 2-210 66-303 (307)
34 3d2m_A Putative acetylglutamat 100.0 6.8E-28 2.3E-32 214.6 17.2 201 2-210 62-305 (456)
35 3c1m_A Probable aspartokinase; 100.0 3.1E-27 1.1E-31 211.0 18.8 159 43-210 122-302 (473)
36 2cdq_A Aspartokinase; aspartat 100.0 6.2E-27 2.1E-31 210.0 20.7 159 43-210 140-325 (510)
37 4ab7_A Protein Arg5,6, mitocho 99.9 4E-26 1.4E-30 201.8 18.3 199 2-209 66-302 (464)
38 2j0w_A Lysine-sensitive aspart 99.9 4.3E-26 1.5E-30 202.1 18.1 159 43-210 111-293 (449)
39 3s6g_A N-acetylglutamate kinas 99.9 4E-26 1.4E-30 202.1 17.3 201 2-209 76-311 (460)
40 3tvi_A Aspartokinase; structur 99.9 1.1E-25 3.9E-30 198.9 19.6 154 43-210 109-280 (446)
41 3kzf_A Carbamate kinase; argin 99.9 5.5E-26 1.9E-30 190.9 13.8 201 2-209 35-317 (317)
42 4axs_A Carbamate kinase; oxido 99.9 4.8E-25 1.6E-29 187.7 19.6 199 2-207 49-331 (332)
43 3s6k_A Acetylglutamate kinase; 99.9 9.7E-26 3.3E-30 199.8 9.1 201 2-209 79-314 (467)
44 3ewi_A N-acylneuraminate cytid 64.9 13 0.00043 27.6 5.5 58 129-198 11-69 (168)
45 1k1e_A Deoxy-D-mannose-octulos 63.9 7.5 0.00026 28.7 4.1 59 129-197 10-69 (180)
46 2p9j_A Hypothetical protein AQ 61.1 11 0.00039 26.9 4.6 58 130-197 12-70 (162)
47 3kbq_A Protein TA0487; structu 58.9 38 0.0013 25.3 7.2 71 54-130 24-94 (172)
48 2obb_A Hypothetical protein; s 40.7 16 0.00055 26.4 2.4 20 3-22 29-48 (142)
49 3f9r_A Phosphomannomutase; try 40.6 52 0.0018 25.5 5.7 51 129-198 6-56 (246)
50 1rkq_A Hypothetical protein YI 39.3 37 0.0013 26.8 4.7 50 129-197 7-56 (282)
51 2fts_A Gephyrin; gephyrin, neu 35.6 1.6E+02 0.0053 25.2 8.3 72 54-131 209-280 (419)
52 2r8e_A 3-deoxy-D-manno-octulos 35.5 43 0.0015 24.6 4.3 11 130-140 29-39 (188)
53 2azn_A HTP reductase, putative 35.2 40 0.0014 25.8 4.1 25 3-27 131-155 (219)
54 2gd9_A Hypothetical protein YY 33.6 48 0.0016 24.6 4.2 26 3-28 107-132 (189)
55 1xvi_A MPGP, YEDP, putative ma 33.3 77 0.0026 24.8 5.7 29 169-197 32-60 (275)
56 1mkz_A Molybdenum cofactor bio 32.7 1.5E+02 0.005 21.8 7.0 66 54-124 29-96 (172)
57 2pr7_A Haloacid dehalogenase/e 32.5 49 0.0017 22.2 3.9 21 3-23 23-43 (137)
58 2pjk_A 178AA long hypothetical 32.3 1.5E+02 0.0051 21.9 6.8 66 54-124 41-108 (178)
59 4gxt_A A conserved functionall 31.8 43 0.0015 28.3 4.1 23 3-25 226-248 (385)
60 3pdw_A Uncharacterized hydrola 31.6 64 0.0022 24.8 4.9 22 3-24 27-49 (266)
61 1xpj_A Hypothetical protein; s 31.4 49 0.0017 22.7 3.7 21 3-23 29-49 (126)
62 1y5e_A Molybdenum cofactor bio 30.8 1.5E+02 0.0053 21.5 6.8 66 54-124 32-99 (169)
63 3fvv_A Uncharacterized protein 30.6 69 0.0023 23.8 4.8 21 3-23 97-117 (232)
64 2fsv_C NAD(P) transhydrogenase 29.9 74 0.0025 24.4 4.6 21 4-24 36-56 (203)
65 1djl_A Transhydrogenase DIII; 29.2 77 0.0026 24.3 4.6 21 4-24 35-55 (207)
66 2is8_A Molybdopterin biosynthe 27.7 1.6E+02 0.0053 21.3 6.1 66 54-124 22-89 (164)
67 2wm8_A MDP-1, magnesium-depend 27.6 64 0.0022 23.4 4.0 22 3-24 73-94 (187)
68 1cz3_A Dihydrofolate reductase 27.5 57 0.0019 23.7 3.7 26 3-28 82-107 (168)
69 1vdr_A DHFR, dihydrofolate red 27.1 40 0.0014 24.5 2.7 25 3-27 82-106 (162)
70 2g2c_A Putative molybdenum cof 26.3 60 0.0021 23.8 3.6 22 2-23 57-78 (167)
71 3n1u_A Hydrolase, HAD superfam 26.2 1.7E+02 0.0057 21.4 6.2 9 132-140 24-32 (191)
72 2p4g_A Hypothetical protein; p 26.0 63 0.0021 25.7 3.9 11 9-19 158-168 (270)
73 3l8h_A Putative haloacid dehal 26.0 57 0.0019 23.3 3.4 22 3-24 32-53 (179)
74 3pzy_A MOG; ssgcid, seattle st 25.7 1.9E+02 0.0065 21.0 6.3 65 54-124 28-93 (164)
75 1nnl_A L-3-phosphoserine phosp 24.5 81 0.0028 23.2 4.2 21 3-23 91-111 (225)
76 1mkz_A Molybdenum cofactor bio 23.7 74 0.0025 23.4 3.7 22 2-23 56-78 (172)
77 2fpr_A Histidine biosynthesis 23.5 94 0.0032 22.4 4.3 24 3-26 47-70 (176)
78 2zqe_A MUTS2 protein; alpha/be 22.9 91 0.0031 20.0 3.6 24 2-25 20-44 (83)
79 3jtw_A Dihydrofolate reductase 22.8 71 0.0024 23.5 3.4 26 3-28 98-123 (178)
80 4as2_A Phosphorylcholine phosp 22.4 65 0.0022 26.6 3.4 22 4-25 149-170 (327)
81 3ib6_A Uncharacterized protein 22.1 83 0.0028 22.9 3.7 21 3-23 39-59 (189)
82 1nrw_A Hypothetical protein, h 21.1 1.2E+02 0.0041 23.7 4.7 29 170-198 28-56 (288)
83 1l6r_A Hypothetical protein TA 20.9 75 0.0026 24.1 3.3 21 3-23 27-47 (227)
84 3dfr_A Dihydrofolate reductase 20.4 55 0.0019 24.0 2.3 25 3-27 79-103 (162)
85 1j3a_A 50S ribosomal protein L 20.1 85 0.0029 22.7 3.2 20 2-21 13-32 (142)
No 1
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.8e-44 Score=299.57 Aligned_cols=205 Identities=55% Similarity=0.906 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA 81 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~ 81 (219)
+++++|++++++|+++|||||||++++++.... .++++...++++++++++|+.+++.+|+++|+++..|++++..++.
T Consensus 76 ~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~~-~gl~~~~~d~~g~lat~~n~~~l~~~L~~~Gi~a~~~~~~~~~~~~ 154 (281)
T 3nwy_A 76 QVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQ-LGMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVA 154 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCTTC---CCTTT-TTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCCGGGS
T ss_pred HHHHHHHHHHHCCCeEEEEECChhHhhhHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccccccc
Confidence 589999999999999999999999988764322 4677777889999999999989999999999999889999888887
Q ss_pred chHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhh
Q 027731 82 EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTS 161 (219)
Q Consensus 82 ~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~ 161 (219)
++|++.+++++|+.|.|||++++.|.++++||++|+++|.+++||+|+++|||||||++||+.+|++++|+++++.|+.+
T Consensus 155 ~~~~~~~~l~lL~~g~IpVv~g~~g~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~~~ 234 (281)
T 3nwy_A 155 EPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLD 234 (281)
T ss_dssp EECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHHHHHT
T ss_pred cccchHHHHHHHHcCCeEEEECCCCCCCCCHHHHHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHHHHHH
Confidence 77777676789999999999998888999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEe
Q 027731 162 KDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG 207 (219)
Q Consensus 162 ~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~ 207 (219)
.|.+.+|++|+..|.++|++++|+|+++|+.|.++|+|+.+||+|.
T Consensus 235 ~g~~v~k~~Aa~~a~~~Gi~v~I~~g~~p~~l~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 235 RGLRVADATAFSLCMDNGMPILVFNLLTDGNIARAVRGEKIGTLVT 280 (281)
T ss_dssp TTCCSSCHHHHHHHHTTTCCEEEEETTSTTHHHHHHHTCCCSEEEC
T ss_pred cCCCcHHHHHHHHHHHCCCeEEEecCCCchHHHHHHcCCCCceEEe
Confidence 7888999999999999999999999999999999999999999995
No 2
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=100.00 E-value=2.3e-43 Score=290.27 Aligned_cols=206 Identities=50% Similarity=0.894 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA 81 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~ 81 (219)
++|++|+++++.|+++|||||||+++++.. +...|++....+.++++++++|..++.++|++.|+++..+++++...+.
T Consensus 36 ~la~~i~~l~~~G~~vviV~gGG~~~~~~~-~~~~g~~~~~~d~~g~l~t~~N~~~l~~al~~~G~~a~~~~~~~~~~v~ 114 (243)
T 3ek6_A 36 RLAHEVIEAQQAGAQVALVIGGGNIFRGAG-LAASGMDRVTGDHMGMLATVINALAMQDALEKLGAKVRVMSAIKINDVC 114 (243)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTTSCSTT-TSCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCBTTTB
T ss_pred HHHHHHHHHHHCCCeEEEEECCCHHHHHHH-HHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHcCCCeEEechhhcCccc
Confidence 689999999999999999999999876542 2234677767788999999999998889999999999988888765444
Q ss_pred chHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhh
Q 027731 82 EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTS 161 (219)
Q Consensus 82 ~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~ 161 (219)
+++..+++.++|+.|.|||++|+.|.++++||++|+++|.+++||+|+++|||||||++||+.+|+++++++++++|+.+
T Consensus 115 ~~~~~~~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~ 194 (243)
T 3ek6_A 115 EDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIM 194 (243)
T ss_dssp EECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHH
T ss_pred CcCCHHHHHHHHHCCcEEEEECCCCCCcCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHHh
Confidence 44434556789999999999998888999999999999999999999999999999999999999999999999998877
Q ss_pred CCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEec
Q 027731 162 KDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 208 (219)
Q Consensus 162 ~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 208 (219)
.|.++||++|+..|.++|++++|+|+++|+.+.++|+|+.+||+|.+
T Consensus 195 ~g~~~~~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 195 QGLEVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTLVQG 241 (243)
T ss_dssp HTCCSSCHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCCSEEECC
T ss_pred CCchhHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHCCCCCceEEee
Confidence 67788999999999999999999999999999999999999999986
No 3
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=100.00 E-value=7.5e-43 Score=286.72 Aligned_cols=206 Identities=53% Similarity=0.899 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA 81 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~ 81 (219)
+++++|+++++.|+++|||||||++++++. +..++++..+.+.++++++.+|..++.++|.++|+++.++++.+..++.
T Consensus 34 ~~~~~i~~l~~~g~~vviV~GgG~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~G~~~~~~~~~~~~~~~ 112 (239)
T 1ybd_A 34 QTVGEIAEVVKMGVQVGIVVGGGNIFRGVS-AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIA 112 (239)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCHHHHHHHH-HHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCBSSSC
T ss_pred HHHHHHHHHHHCCCeEEEEECCcHHHhchh-HHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeecccccc
Confidence 589999999999999999999999988764 2234577667778888999999998788999999999888887766555
Q ss_pred chHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhh
Q 027731 82 EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTS 161 (219)
Q Consensus 82 ~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~ 161 (219)
+.|.+.++.++|+.|.|||++++.|.+++++|++|+++|.+|+||+|+|||||||||++||+.+|++++|++++++|+.+
T Consensus 113 ~~~~~~~~~~ll~~g~ipVv~g~~g~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~ 192 (239)
T 1ybd_A 113 ETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALL 192 (239)
T ss_dssp EECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHH
T ss_pred cchhHHHHHHHHhCCcEEEEECCccCCCCCcHHHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHH
Confidence 44545555588999999999988888999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEec
Q 027731 162 KDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 208 (219)
Q Consensus 162 ~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 208 (219)
+|.++||++++..|.++|++++|+|+++|+.+.++++|+.+||+|.+
T Consensus 193 ~g~~~m~~~a~~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 193 KNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVITGEDEGTLVHC 239 (239)
T ss_dssp TTCCSSCHHHHHHHHHTTCCEEEECTTSTTHHHHHHHTCSCSEEEEC
T ss_pred hcccccCHHHHHHHHHcCCcEEEEeCCChhHHHHHHcCCCCCeEEcC
Confidence 88889999999999999999999999999999999999999999974
No 4
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=100.00 E-value=1.8e-42 Score=284.58 Aligned_cols=205 Identities=53% Similarity=0.874 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCC-CCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSG-LDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV 80 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~ 80 (219)
+++++|+++++.|+++|||||||++++++... ..| ++..+.+.++++++.+|+.+++.+|+++|++++++++.+....
T Consensus 34 ~~a~~I~~l~~~G~~vvlV~gGG~~~~g~~~~-~~G~~~~~~~~~~~~la~~~n~~l~~~~l~~~G~~av~lt~~d~~~~ 112 (240)
T 4a7w_A 34 HIAKEIKSLVENDIEVGIVIGGGNIIRGVSAA-QGGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTRVQSAIEIKEI 112 (240)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCTTTC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCCTTT
T ss_pred HHHHHHHHHHHCCCcEEEEECCcHHHhHhHHH-hcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEecHHHcCcc
Confidence 58999999999999999999999988776532 246 6776778899999999999998899999999998888776543
Q ss_pred cchHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHh
Q 027731 81 AEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVT 160 (219)
Q Consensus 81 ~~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~ 160 (219)
.+++..+.+.++|+.|.|||++|+.|.++++||++|+++|.+|+||+|++||||||||++||+.+|++++++++++.|+.
T Consensus 113 ~~~~~~~~i~~lL~~g~ipVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~ 192 (240)
T 4a7w_A 113 CESYIYRKAIRHLEKGRVVIFGAGTGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDAL 192 (240)
T ss_dssp SEECCHHHHHHHHHTTCEEEEESTTSCTTSCHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHH
T ss_pred cCcCcHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHH
Confidence 33332245667899999999999878889999999999999999999999999999999999999999999999999988
Q ss_pred hCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCC-CCceEEe
Q 027731 161 SKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGE-RVGTLIG 207 (219)
Q Consensus 161 ~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~-~~GT~i~ 207 (219)
+.|.++||++|+..|.++|++++|+|+++|+.+.+++.|+ .+||+|.
T Consensus 193 ~~g~~~m~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~g~GT~i~ 240 (240)
T 4a7w_A 193 IGDIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMVK 240 (240)
T ss_dssp HSSCCSSCHHHHHHHHHTTCCEEEEESSSTTHHHHHHHHSCSSCEEEC
T ss_pred hcCccccHHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCCCceeeC
Confidence 8888899999999999999999999999999999888766 5799983
No 5
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=100.00 E-value=2e-42 Score=285.51 Aligned_cols=206 Identities=44% Similarity=0.807 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA 81 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~ 81 (219)
+++++|+++++.|+++|||||||++++++. +..++++.++.+.++++++++|..++.++|.++|+++.++++.+..++.
T Consensus 35 ~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~-~~~~g~~~~~~d~~~~~~~~~~~~ll~~~l~~~G~~~~~~~~~~~~~~~ 113 (247)
T 2a1f_A 35 RMAVEIKELVEMGVEVSVVLGGGNLFRGAK-LAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGIC 113 (247)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTTCCCHH-HHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCCTTTS
T ss_pred HHHHHHHHHHHCCCeEEEEECCChHhcchh-HHHcCCCCCcHHHHHHHHHHHHHHHHHHHHHHcCCCeEEeccccccccc
Confidence 589999999999999999999999987764 2234577777888899999999997888999999999988888766555
Q ss_pred chHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhh
Q 027731 82 EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTS 161 (219)
Q Consensus 82 ~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~ 161 (219)
++|.+.++.++|+.|.|||++|+.|.+++++|++|+++|.+|+||+|+|||||||||++||+.+|++++|++++++|+.+
T Consensus 114 ~~~~~~~~~~ll~~g~ipVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~ 193 (247)
T 2a1f_A 114 DTYNWSEAIKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVID 193 (247)
T ss_dssp EECCHHHHHHHHHTTCEEEEESTTSCSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHH
T ss_pred chhhHHHHHHHHhCCCEEEEeCCcCCCCCCcHHHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHH
Confidence 44555566678999999999998788899999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEec
Q 027731 162 KDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 208 (219)
Q Consensus 162 ~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 208 (219)
+|.++||++|+..|.+.|++++|+|+++|+.+.++++|+.+||+|..
T Consensus 194 ~g~~~m~~~aa~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~GT~~~~ 240 (247)
T 2a1f_A 194 KELKVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTICE 240 (247)
T ss_dssp TTCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHTCSCSSEEECC
T ss_pred cCccccCHHHHHHHHHcCCcEEEEeCCCchHHHHHHcCCCCceEEee
Confidence 88889999999999999999999999999999999999999999975
No 6
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=100.00 E-value=6.7e-42 Score=283.21 Aligned_cols=208 Identities=51% Similarity=0.871 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA 81 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~ 81 (219)
+++++|+++++.|+++|||||||+++.++. +..++++..+.+.++++++.+|..++.++|.++|+++.++++.+..++.
T Consensus 34 ~~a~~I~~l~~~G~~vVlVhGgG~~~~g~~-~~~lg~~~~~~~~~~~~~~~~~~~ll~~al~~~G~~~~~~~~~~~~~~~ 112 (252)
T 1z9d_A 34 AIAKEIAEVHVSGVQIALVIGGGNLWRGEP-AADAGMDRVQADYTGMLGTVMNALVMADSLQHYGVDTRVQTAIPMQNVA 112 (252)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTTCCHHH-HHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESSCBTTTB
T ss_pred HHHHHHHHHHhCCCEEEEEECCChHhccch-HHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecccccccc
Confidence 589999999999999999999999877653 2223577777778888999999997888999999999988887766554
Q ss_pred chHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeee-ccCccccCCCCCCCCCcccccccHHHHh
Q 027731 82 EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKAT-NVDGVYDDNPRRNPNARLLDTLTYQEVT 160 (219)
Q Consensus 82 ~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liilt-DV~Gv~~~dP~~~~~a~~i~~i~~~e~~ 160 (219)
++|.+.++.++|+.|.|||++|+.|.+++++|++|+++|.+|+||+|+|+| ||||||++||+.+|++++|+++++.|+.
T Consensus 113 ~~~~~~~~~~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~ 192 (252)
T 1z9d_A 113 EPYIRGRALRHLEKNRIVVFGAGIGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVI 192 (252)
T ss_dssp EECCHHHHHHHHHTTCEEEEESTTSCTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHH
T ss_pred CcchHHHHHHHHhCCCEEEEeCCcCCCCCChHHHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHH
Confidence 445555666789999999999987888999999999999999999999999 9999999999999999999999999988
Q ss_pred hCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEecCC
Q 027731 161 SKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 210 (219)
Q Consensus 161 ~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~~~ 210 (219)
+.|.++||++|+..|.+.|++++|+|+++|+.+.++|+|+..||+|.++.
T Consensus 193 ~~~~~~mk~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~ 242 (252)
T 1z9d_A 193 KRGLKIMDATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEHIGTTVSNKV 242 (252)
T ss_dssp TTTCCCSCHHHHHHHHHTTCEEEEEETTSTTHHHHHHTTCCCSEEEECC-
T ss_pred hccccccCHHHHHHHHHcCCeEEEEeCCCchHHHHHHcCCCCceEEecCC
Confidence 88888899999999999999999999999999999999999999998754
No 7
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=100.00 E-value=8.8e-42 Score=283.08 Aligned_cols=204 Identities=38% Similarity=0.687 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA 81 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~ 81 (219)
+++++|++++ .|+++|||||||++++++. +..++++..+.+.++++++.+|..++.++|.++|+++.++++++...+.
T Consensus 51 ~~a~~i~~l~-~g~~vVlVhGgG~~~~~~~-~~~~g~~~~~~~~~~~l~~~~n~~l~~~~l~~~Gi~a~~~~~~t~~~~~ 128 (256)
T 2va1_A 51 DLAEQIEKIS-KKYIVSIVLGGGNIWRGSI-AKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIKCDKLV 128 (256)
T ss_dssp HHHHHHHHHT-TTSEEEEEECCTTTCCHHH-HHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESSCCTTTC
T ss_pred HHHHHHHHHh-CCCEEEEEECCcHHhccch-HHHcCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeccccc
Confidence 5789999999 8999999999999987754 2334577666777888999999998788999999999889888877766
Q ss_pred chHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeec-cCccccCCCCCCCCCcccccccHHHHh
Q 027731 82 EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATN-VDGVYDDNPRRNPNARLLDTLTYQEVT 160 (219)
Q Consensus 82 ~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltD-V~Gv~~~dP~~~~~a~~i~~i~~~e~~ 160 (219)
++|++.++..+|+.|.|||++|..|.++++||++|+++|.+|+||+|+|+|| |||||++||+.+|++++|++++++|+.
T Consensus 129 ~~~~~~~~~~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~ 208 (256)
T 2va1_A 129 HESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMAL 208 (256)
T ss_dssp EECCHHHHHHHHHTTCEEEEESTTSSSSCCHHHHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEHHHHH
T ss_pred chhhHHHHHHHHhCCcEEEEECCCCCCCCChhHHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHH
Confidence 6666656667899999999999878899999999999999999999999999 999999999999999999999999988
Q ss_pred hCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEe
Q 027731 161 SKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG 207 (219)
Q Consensus 161 ~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~ 207 (219)
+++.++||++|+..|.++|++++|+|+++|+.+.++|+|+..||+|.
T Consensus 209 ~~~~~~mk~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 209 TQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVS 255 (256)
T ss_dssp HHTCCSSCHHHHHHHHHTTCEEEEEESSSTTHHHHHHTTCSCEEEEE
T ss_pred HhccCCccHHHHHHHHHCCCeEEEEeCCCchHHHHHHcCCCCeEEEe
Confidence 76667789999999999999999999999999999999999999996
No 8
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=100.00 E-value=5.8e-40 Score=272.01 Aligned_cols=208 Identities=44% Similarity=0.773 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCcChHHHHHHHHHHHHHHHHHHHHHh-cCCCeeEecccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNAIFLQATMES-IGIPTRVQTAFRMSEV 80 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~gi~a~~~~~~~~~~~ 80 (219)
+++++|+++++.|+++|||||||++.+++. +..+++++...+.++++++.+|+.++..+|.+ +|+++.++++.+...+
T Consensus 39 ~~a~~I~~l~~~G~~vViV~GgG~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~ll~~~l~~~~Gi~a~~l~~~~~~~v 117 (255)
T 2jjx_A 39 HIANEILSIVDLGIEVSIVIGGGNIFRGHL-AEEWGIDRVEADNIGTLGTIINSLMLRGVLTSKTNKEVRVMTSIPFNAV 117 (255)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTTCCHHH-HHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEESSCCCSS
T ss_pred HHHHHHHHHHHCCCeEEEEECchHHHhhhH-HHHcCCCCCChHHHhHHHHHHHHHHHHHHHHhhcCCceEEecHHHcCcc
Confidence 589999999999999999999999876554 22345665566778889999999978899999 9999998887765544
Q ss_pred cchHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeee-ccCccccCCCCCCCCCcccccccHHHH
Q 027731 81 AEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKAT-NVDGVYDDNPRRNPNARLLDTLTYQEV 159 (219)
Q Consensus 81 ~~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liilt-DV~Gv~~~dP~~~~~a~~i~~i~~~e~ 159 (219)
.+++...++.++|+.|.|||++|..|++++++|++|+++|.+|+||+|+||| ||||||++||+.+|++++|++++++|+
T Consensus 118 ~~~~~~~~~~~lL~~g~IpVi~gg~g~~~vttD~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~ 197 (255)
T 2jjx_A 118 AEPYIRLRAVHHLDNGYIVIFGGGNGQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDV 197 (255)
T ss_dssp SEECCHHHHHHHHHTTCEEEEESTTSCSSCCSHHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHH
T ss_pred cCcccHHHHHHHHhCCcEEEEeCCCCCCccchHHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHH
Confidence 3333334455889999999999765678899999999999999999999999 999999999999999999999999999
Q ss_pred hhCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEecCC
Q 027731 160 TSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 210 (219)
Q Consensus 160 ~~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~~~ 210 (219)
.++|.++|++.|++.+.+.|++++|+|+++|+.+.++++|+..||+|.++.
T Consensus 198 ~~~G~~~m~~~a~~~a~~~gi~v~I~~~~~~~~l~~~l~g~~~GT~I~~~~ 248 (255)
T 2jjx_A 198 VRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDDA 248 (255)
T ss_dssp HHTTCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHBTCCCSEEEESSC
T ss_pred HHcCCccCHHHHHHHHHHcCCeEEEEeCCCchHHHHHhcCCCCceEEecCc
Confidence 888989999999999998999999999999999999999998999998743
No 9
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=100.00 E-value=3.3e-39 Score=263.01 Aligned_cols=193 Identities=25% Similarity=0.420 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHH-HhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGAS-AAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV 80 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~ 80 (219)
+++++|+++++.|+++|||||||++++++. .+...++++.+.+.++++++.+|+.+++..|+++|+++ .. .
T Consensus 22 ~~~~~i~~l~~~g~~vvlV~ggG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~l~~~g~~~---~~-----~ 93 (226)
T 2j4j_A 22 VLRQSIKELADNGFRVGIVTGGGSTARRYIKLAREIGIGEAYLDLLGIWASRLNAYLVMFSLQDLAYMH---VP-----Q 93 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHTTSBCSC---CC-----S
T ss_pred HHHHHHHHHHhCCCeEEEEECcchHhchhHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCC---Cc-----C
Confidence 588999999999999999999999988752 23345677777888899999999999888999999864 11 1
Q ss_pred cchHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHh
Q 027731 81 AEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVT 160 (219)
Q Consensus 81 ~~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~ 160 (219)
+ .+++.++|+.|.|||++| |.+++++|++|+++|.+|+||+|+|||||||||++||+.+|++++|+++++.|+.
T Consensus 94 -~---~~~i~~ll~~g~ipVi~g--g~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~ 167 (226)
T 2j4j_A 94 -S---LEEFIQDWSHGKVVVTGG--FQPGQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLR 167 (226)
T ss_dssp -S---HHHHHHHHTTSSBEEECC--CSTTSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHH
T ss_pred -C---HHHHHHHHHCCCEEEEcC--CCCCCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHH
Confidence 1 134667899999999999 6789999999999999999999999999999999999999999999999999876
Q ss_pred hC--------CCC--CchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEec
Q 027731 161 SK--------DLS--VMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 208 (219)
Q Consensus 161 ~~--------g~~--~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 208 (219)
++ |+| ++|++++..|.++|++++|+|+++|+.+.++|+|+..||+|.+
T Consensus 168 ~l~~~~~~~~ggm~~~~k~~a~~~a~~~gi~v~I~~~~~~~~l~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 168 KILEGSQSVQAGTYELLDPLAIKIVERSKIRVIVMNYRKLNRIIDILKGEEVSSIIEP 225 (226)
T ss_dssp HHHC----------CCSCHHHHHHHHHTTCEEEEEEGGGGGGHHHHHTTCSSCEEEEC
T ss_pred HHhhcCCCCcCCccccchHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEEee
Confidence 54 455 8899999999999999999999999999999999999999975
No 10
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=100.00 E-value=5.6e-38 Score=258.47 Aligned_cols=192 Identities=28% Similarity=0.421 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHH-HhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGAS-AAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV 80 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~ 80 (219)
+++++|+++++ |+++|||||||++++++. .+..+++++...+.++++++.+|..+++..|.++|++.. . +
T Consensus 43 ~~~~~i~~l~~-g~~vViV~GgG~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~l~~~~l~~~g~~~~---~-----~ 113 (244)
T 2brx_A 43 EIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFNSSETFKDFIGIQITRANAMLLIAALREKAYPVV---V-----E 113 (244)
T ss_dssp HHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHGGGBCSSC---B-----C
T ss_pred HHHHHHHHHhC-CCeEEEEECccHHHhchHHHHHHcCCCcccHHHHHHHHHHHHHHHHHHHHHHcCCCCC---c-----C
Confidence 58999999999 999999999999988742 234467887778888999999999998889999997641 0 1
Q ss_pred cchHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHh
Q 027731 81 AEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVT 160 (219)
Q Consensus 81 ~~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~ 160 (219)
+ .+++.++|+.|.|||++| |.+++++|++|+++|.+|+||+|+|+|||||||++||+.+|++++|+++++.|+.
T Consensus 114 -~---~~~i~~lL~~g~IpVi~g--g~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~ 187 (244)
T 2brx_A 114 -D---FWEAWKAVQLKKIPVMGG--THPGHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELL 187 (244)
T ss_dssp -S---HHHHHHHHHTTCBCEECC--CSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHH
T ss_pred -C---HHHHHHHHhCCCEEEEcC--CCCCCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHH
Confidence 1 134567899999999999 7788999999999999999999999999999999999999999999999999876
Q ss_pred hC----C----C-CCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEec
Q 027731 161 SK----D----L-SVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 208 (219)
Q Consensus 161 ~~----g----~-~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 208 (219)
++ | + +.+++.|++.+.+.+++++|+|+++|+.+.++|+|+.+||+|.+
T Consensus 188 ~~~~~~g~~~g~m~~~~~~A~~~~~~~~~~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 188 EIVGKGIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLFRVIKGDHNGTTIEP 244 (244)
T ss_dssp HHHHC--------CCSCHHHHHHHHHHTCCEEEECHHHHTCHHHHHTTCSSSEEECC
T ss_pred HHHhccCCCCCCCcchHHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEecC
Confidence 54 2 2 45688899999989999999999999999999999999999964
No 11
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=100.00 E-value=2.8e-36 Score=244.52 Aligned_cols=189 Identities=35% Similarity=0.474 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHH-HhccCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGAS-AAGNSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV 80 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~ 80 (219)
+++++|+++++ |+++|||||||++++++. .++..++++.+.+.++++++.+|..+++.+|+.. +. + + .+
T Consensus 21 ~~~~~i~~l~~-g~~vvlV~ggG~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~l~~~~~~~~-~~---~---~--~~ 90 (219)
T 2ij9_A 21 EFAKTIESVAQ-QNQVFVVVGGGKLAREYIKSARELGASETFCDYIGIAATRLNAMLLISAIPSA-AK---K---V--PV 90 (219)
T ss_dssp HHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCTTB-CS---S---C--CS
T ss_pred HHHHHHHHHcC-CCEEEEEECcchHhcchHHHHHHcCCCccchHHHHHHHHHHHHHHHHHHHHHh-cC---C---C--cC
Confidence 58999999999 999999999999988742 2334568877888899999999999987666543 21 1 0 01
Q ss_pred cchHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHh
Q 027731 81 AEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVT 160 (219)
Q Consensus 81 ~~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~ 160 (219)
+ .+.+.++|+.|.|||++| |.+++++|++|+++|.+|+||+|+|+|||||||++||+.+|++++|+++++.|+.
T Consensus 91 -~---~~~i~~ll~~g~ipVi~~--g~~~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~ 164 (219)
T 2ij9_A 91 -D---FMEAEELSKLYRVVVMGG--TFPGHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLV 164 (219)
T ss_dssp -S---HHHHHHHHTTCSEEEECC--CSSSSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHH
T ss_pred -C---HHHHHHHHHCCCEEEEeC--CCCCCCchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHH
Confidence 1 134667899999999999 7788999999999999999999999999999999999999999999999999876
Q ss_pred hC----CC-----CCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEe
Q 027731 161 SK----DL-----SVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIG 207 (219)
Q Consensus 161 ~~----g~-----~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~ 207 (219)
++ |. +..|+.|++.+.+.+++++|+|+ +|+.+.++|+|+.+||+|+
T Consensus 165 ~~~~~~g~~~g~~~~~~~~a~~~~~~~~~~v~I~~g-~~~~l~~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 165 EIVSRSSAKAGTNVVIDLLAAKIIERSKIKTYVILG-TPENIMKAVKGEAVGTVIA 219 (219)
T ss_dssp HHTCC-----CCCCCSCHHHHHHHHHHTCCEEEEEC-CHHHHHHHHTTCCCSEEEC
T ss_pred HHHhcCCCCCCCccchHHHHHHHHHHCCCeEEEEEC-CHhHHHHHHcCCCCCeEeC
Confidence 54 22 45688999999999999999999 9999999999999999984
No 12
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=100.00 E-value=2.1e-35 Score=255.60 Aligned_cols=206 Identities=20% Similarity=0.302 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCc--ChHHHHHHHHHHH---HHHHHHHHHHhcCCCeeEecccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDR--SSADYIGMLATVM---NAIFLQATMESIGIPTRVQTAFR 76 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~l~~~~l~~~gi~a~~~~~~~ 76 (219)
+++++|+++++.|+++||||||| ++.++..++ ++. .+.+..+++++.. ...++...|+++|+++. +...+
T Consensus 30 ~la~~Ia~l~~~G~~vVlV~gGg-i~~g~~~lg---~~~~~~~l~~~qa~aavGq~~l~~~~~~~l~~~G~~~~-qvllt 104 (367)
T 2j5v_A 30 ELVRQCAQLHAAGHRIVIVTSGA-IAAGREHLG---YPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVG-QMLLT 104 (367)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCH-HHHHHHHHT---SCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEE-EEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEEcCH-HHHHHHHcC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCceE-EEEEe
Confidence 58999999999999999999765 666776665 433 3456666655432 24456789999999986 44455
Q ss_pred cccccc--hHHHH--HHHHHHhCCCEEEEeCC-----CCCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCC
Q 027731 77 MSEVAE--PYIRR--RAVRHLEKGRVVIFAAG-----TGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPN 147 (219)
Q Consensus 77 ~~~~~~--~~~~~--~~~~~l~~g~ipIv~g~-----~g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~ 147 (219)
..++.. ++++. .+..+|+.|.|||++++ .+..+++||++|+++|.+++||+|+|+|||||||++||+.+|+
T Consensus 105 ~~d~~~~~r~~n~~~~i~~LL~~g~IPIv~end~v~~~el~~gd~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~ 184 (367)
T 2j5v_A 105 RADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQ 184 (367)
T ss_dssp GGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECTTSCCGGGCCCSHHHHHHHHHHHHTCSEEEEEECC-------------
T ss_pred cccccCceEEEhHHHHHHHHHHCCCEEEECCCCceecccccCCCHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCC
Confidence 555543 34443 34578999999999965 2356899999999999999999999999999999999999999
Q ss_pred CcccccccH--HHHhhC--------CCCCc--hHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEecCCCC
Q 027731 148 ARLLDTLTY--QEVTSK--------DLSVM--DMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTWNS 212 (219)
Q Consensus 148 a~~i~~i~~--~e~~~~--------g~~~~--k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~~~~~ 212 (219)
+++|+++++ .|+.++ |+++| |++|+..|.++|++++|+|+++|+.|.++++|+..||+|.++...
T Consensus 185 a~~I~~i~~~~~e~~~l~~~~~s~~gtGgM~~Kl~Aa~~a~~~Gv~v~I~~g~~~~~L~~~l~g~~~GT~i~~~~~~ 261 (367)
T 2j5v_A 185 AELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATP 261 (367)
T ss_dssp -----------------------------CHHHHHHHHHHHHTTCEEEEEETTSTTHHHHHHHTCCCSEEECCCSSC
T ss_pred CeEeeeeCCCHHHHHHHhhccCCCcCcCccHHHHHHHHHHHHcCCCEEEEcCCCchHHHHHhcCCCCcEEEEcCccc
Confidence 999999999 776543 34444 889999999999999999999999999999999999999876544
No 13
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=100.00 E-value=1.8e-34 Score=241.48 Aligned_cols=197 Identities=25% Similarity=0.300 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhc-cCCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAG-NSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV 80 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~ 80 (219)
+++++|++++ .|+++|||||||++++.+..++ ..+++.+..+.+++.++.+|..+++.++.+.|++.+...
T Consensus 60 ~l~~~I~~l~-~G~~vVlV~GGg~~~~~~~~~~~~~gl~~~~l~~v~~~~~~~n~~l~~~ll~~~g~~~v~~~------- 131 (276)
T 2ogx_A 60 PLVEELRKLL-PEHRLLILTGAGVRARHVFSVGLDLGLPVGSLAPLAASEAGQNGHILAAMLASEGVSYVEHP------- 131 (276)
T ss_dssp HHHHHHHHHT-TTCEEEEEECCTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBCCHH-------
T ss_pred HHHHHHHHHh-CCCeEEEEECcHHHHHHHHhccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc-------
Confidence 5889999998 7999999999999876544333 256766677778877788999888877778898754211
Q ss_pred cchHHHHHHHHHHhCCCEEEEeCCC--------C--CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCC--CCCCC
Q 027731 81 AEPYIRRRAVRHLEKGRVVIFAAGT--------G--NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPR--RNPNA 148 (219)
Q Consensus 81 ~~~~~~~~~~~~l~~g~ipIv~g~~--------g--~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~--~~~~a 148 (219)
...+.+..+|+.|.|||++|+. | .++++||++|+++|.+|+||+|+|+|||||||++||+ .+|++
T Consensus 132 ---~~~~~i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a 208 (276)
T 2ogx_A 132 ---TVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQA 208 (276)
T ss_dssp ---HHHHHHHHHHHHSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGC
T ss_pred ---ChHHHHHHHHhCCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCC
Confidence 1113355789999999999951 1 2579999999999999999999999999999999998 89999
Q ss_pred cccccccHHHHhhC-CCCCchHHHHHHHH--hCCCcEEEEecCCCchHHHHhcCCCCceEEecC
Q 027731 149 RLLDTLTYQEVTSK-DLSVMDMTAITLCQ--ENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGT 209 (219)
Q Consensus 149 ~~i~~i~~~e~~~~-g~~~~k~~aa~~a~--~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 209 (219)
++|+++++.|+.++ |.++|++++...+. +.+++++|+|+++|+.+.++|+|+..||+|.++
T Consensus 209 ~~i~~i~~~e~~~~~g~ggM~~K~~~~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 272 (276)
T 2ogx_A 209 RFLPETSATDLAKSEGPLPVDRALLDVMATARHIERVQVVNGLVPGRLTAALRGEHVGTLIRTG 272 (276)
T ss_dssp CEESEEEHHHHHTSCSCCSSCHHHHHHHHTCSSCCEEEEEETTSTTHHHHHHTTCCCSEEEECS
T ss_pred eEcceeCHHHHHHHhCcCChHHHHHHHHHHhcCCCeEEEEECCCccHHHHHHcCCCCceEEccC
Confidence 99999999999887 67777776666555 558899999999999999999999999999865
No 14
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=2.7e-34 Score=239.51 Aligned_cols=200 Identities=25% Similarity=0.316 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHh-HHHhccCCCCcCh-------HHHHHHHHH-----HHHHHHHHHHHHhcCCC
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRG-ASAAGNSGLDRSS-------ADYIGMLAT-----VMNAIFLQATMESIGIP 68 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~-----~~~~~l~~~~l~~~gi~ 68 (219)
+++++|++++ +.++|||||||++.+. ..+.+ +..+. .+..++..+ .+|..+ .++|+++|++
T Consensus 31 ~l~~~i~~l~--~~~~vlVhGGG~~~~~~~~~~g---i~~~~~~~~g~~~~~~G~rvT~~~~~~ln~~l-~~~L~~~G~~ 104 (269)
T 3ll9_A 31 RIASEIGNAS--PSSLMIVHGAGSFGHPFAGEYR---IGSEIENEEDLRRRRFGFALTQNWVKKLNSHV-CDALLAEGIP 104 (269)
T ss_dssp HHHHHHHHHC--CSSEEEEECCGGGTHHHHHHHT---TTSCCCSHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTTCC
T ss_pred HHHHHHHHhc--CCCEEEEECCcHHHHHHHHHcC---CCcccccCcccccccchhhHHHHHHHHHHHHH-HHHHHHCCCc
Confidence 4778887765 5899999999998653 23333 43211 113444444 378765 5799999999
Q ss_pred eeEeccccccccc--c-hHHH-HHHHHHHhCCCEEEEeCC-----C--C-CCccChHHHHHHHHHhcCCceEEeeeccCc
Q 027731 69 TRVQTAFRMSEVA--E-PYIR-RRAVRHLEKGRVVIFAAG-----T--G-NPFFTTDTAAALRCAEINAEVVLKATNVDG 136 (219)
Q Consensus 69 a~~~~~~~~~~~~--~-~~~~-~~~~~~l~~g~ipIv~g~-----~--g-~~~~~sD~~Aa~lA~~l~Ad~liiltDV~G 136 (219)
++++++.+..... + .+++ +.+..+|+.|.|||++++ . + .+++++|++|+++|.+|+||+|+|+|||||
T Consensus 105 a~~l~g~~~~~~~~g~v~~v~~~~i~~lL~~g~ipVi~~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdv~G 184 (269)
T 3ll9_A 105 AVSMQPSAFIRAHAGRISHADISLIRSYLEEGMVPVVYGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDVDG 184 (269)
T ss_dssp EEECCGGGTEEEETTEEEEECCHHHHHHHHTTCEEEEECEEEEBSCTTTSEEEECHHHHHHHHHHHHCCSEEEEEESSSS
T ss_pred EEEEcchHcCeEecCeeeeecHHHHHHHHHCCCEEEECCCEEecccccCcceecchHHHHHHHHHHcCCCeEEEecCCCE
Confidence 9998877643221 1 1122 345679999999999983 2 2 346899999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccccHHHHhhC----------CCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCC-ceE
Q 027731 137 VYDDNPRRNPNARLLDTLTYQEVTSK----------DLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERV-GTL 205 (219)
Q Consensus 137 v~~~dP~~~~~a~~i~~i~~~e~~~~----------g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~-GT~ 205 (219)
||++||+.+|++++|+++++.|+.++ |+|..|+++|..+.++|++++|+|++.|+.+.++|+|+.+ ||+
T Consensus 185 v~~~dp~~~~~a~~i~~i~~~e~~~~l~~~~~~~~tgGM~~Kl~aa~~a~~~Gv~v~I~~g~~~~~l~~~~~g~~~~GT~ 264 (269)
T 3ll9_A 185 VYTRNPKKHPDARLLDVIGSLDDLESLDGTLNTDVTGGMVGKIRELLLLAEKGVESEIINAAVPGNIERALLGEEVRGTR 264 (269)
T ss_dssp CBSSCTTTCTTCCBCSBCCC-------------------SHHHHHHHHHHHTTCCEEEEESSSTTHHHHHHHTCCCSSEE
T ss_pred EEcCCCCcCCcceEccccCHHHHHHHhcccCCCcCcCCcHHHHHHHHHHHhCCCeEEEEeCCCchHHHHHHCCCCCCcEE
Confidence 99999999999999999999876532 4567799999999999999999999999999999999998 999
Q ss_pred Ee
Q 027731 206 IG 207 (219)
Q Consensus 206 i~ 207 (219)
|.
T Consensus 265 i~ 266 (269)
T 3ll9_A 265 IT 266 (269)
T ss_dssp C-
T ss_pred EE
Confidence 97
No 15
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=100.00 E-value=5.9e-34 Score=235.38 Aligned_cols=200 Identities=17% Similarity=0.160 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhccCCCCcChHHHHHHHHHHHHH---HHHHHHHHhcCCCeeEecccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGNSGLDRSSADYIGMLATVMNA---IFLQATMESIGIPTRVQTAFRMS 78 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~l~~~gi~a~~~~~~~~~ 78 (219)
+++++|+++++. +++||||||| ...+...++ +........+++++..+. .++.++|.++|+++..+ ..+..
T Consensus 26 ~~~~~i~~l~~~-~~vVlVhgGg-~~~~~~~~g---~~~~~~~~~~~l~~~~q~~l~~~~~~~l~~~G~~~~~i-~~~~~ 99 (251)
T 2ako_A 26 NLVAFLAKLMEK-YEVILVTSAA-ISAGHTKLD---IDRKNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQI-LLTGK 99 (251)
T ss_dssp HHHHHHHHHHHH-SEEEEEECCH-HHHHHHHCC---CCSSSHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEE-EECTG
T ss_pred HHHHHHHHHHhC-CCEEEEECCH-HHHHHHHhC---CccCCchHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEE-Eeccc
Confidence 589999999888 9999999877 445555555 333112222344443333 23567899999998743 23333
Q ss_pred cccc--hHHHH-H-HHHHHhCCCEEEEeCCC-----CCCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCc
Q 027731 79 EVAE--PYIRR-R-AVRHLEKGRVVIFAAGT-----GNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNAR 149 (219)
Q Consensus 79 ~~~~--~~~~~-~-~~~~l~~g~ipIv~g~~-----g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~ 149 (219)
++.. ++++. + +..+|+.|.|||+++++ +.+++++|++|+++|.+|+||+|+|+|||||||++||+.+|+++
T Consensus 100 ~~~~~~~~~~~~~~i~~ll~~g~ipVi~~~d~v~~~~~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~ 179 (251)
T 2ako_A 100 DFDSRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAK 179 (251)
T ss_dssp GGGCHHHHHHHHHHHHHHHHTTCEEEEEECTTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCC
T ss_pred hhcCcceEehHHHHHHHHHHCCCEEEEeCCCceeecceeecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCe
Confidence 3332 24433 3 44689999999999642 23579999999999999999999999999999999999999999
Q ss_pred ccccccHH--HHhhC--------CC--CCchHHHHHHHHhCCCcEEEEecCCCchHHH--HhcCCCCceEEe
Q 027731 150 LLDTLTYQ--EVTSK--------DL--SVMDMTAITLCQENNIPVVVFNLNQPGNIAK--AIQGERVGTLIG 207 (219)
Q Consensus 150 ~i~~i~~~--e~~~~--------g~--~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~--~l~g~~~GT~i~ 207 (219)
+|+++++. |+.++ ++ |.+|++|+..|.++|++++|+|+++|+.+.+ +|+|+..||+|.
T Consensus 180 ~i~~i~~~~~e~~~~~~~~~~~~~~ggm~~k~~aa~~a~~~gv~v~I~~g~~~~~l~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 180 RLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLLEHNKKMFLASGFDLSVAKTFLLEDKQIGGTLFE 251 (251)
T ss_dssp BCCEESCCCGGGC---------CBSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHHHHHHSCCCCSSEEEC
T ss_pred EeeEeccchHHHHHHhcccCCCCccCchHHHHHHHHHHHHCCCeEEEEeCCChhhhhhhHHhcCCCCceEeC
Confidence 99999997 76543 23 4669999999999999999999999999999 999998999984
No 16
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=100.00 E-value=4.5e-33 Score=235.58 Aligned_cols=205 Identities=19% Similarity=0.191 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHH-HhHHHhcc-----CCCCcCh---HHHHHHH-HHHHHHHHHHHHHHhcCCCeeE
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIF-RGASAAGN-----SGLDRSS---ADYIGML-ATVMNAIFLQATMESIGIPTRV 71 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~-~~~~~~~~-----~~~~~~~---~~~~~~~-~~~~~~~l~~~~l~~~gi~a~~ 71 (219)
+++++|+.+++.|+++|||||||++. ..+..++. .|++.+. .+.++++ ...++.. +.+.|+++|+++++
T Consensus 45 ~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~~~g~R~t~~~~l~~~~~~~~G~l~~~-l~~~L~~~g~~av~ 123 (299)
T 2ap9_A 45 AFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRE-LVNLINAHGPYAVG 123 (299)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCSHHHHHHHHHHTCCCCCSSSSCCBCHHHHHHHHHHHHHTHHHH-HHHHHTTSSSCEEE
T ss_pred HHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCcccccCCcccCCHHHHHHHHHHHhhHHHHH-HHHHHHhCCCCceE
Confidence 57899999999999999999999854 44455442 1333332 3444443 3356666 46899999999998
Q ss_pred eccccccccc-ch-------------------HHH-HHHHHHHhCCCEEEEeCC----CCCCc-cChHHHHHHHHHhcCC
Q 027731 72 QTAFRMSEVA-EP-------------------YIR-RRAVRHLEKGRVVIFAAG----TGNPF-FTTDTAAALRCAEINA 125 (219)
Q Consensus 72 ~~~~~~~~~~-~~-------------------~~~-~~~~~~l~~g~ipIv~g~----~g~~~-~~sD~~Aa~lA~~l~A 125 (219)
+++.+...+. ++ .++ +.+..+|+.|.|||++++ .|..+ +++|++|+.+|.+|+|
T Consensus 124 lt~~d~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVv~~v~~~~~G~~~~l~~D~~Aa~lA~~l~A 203 (299)
T 2ap9_A 124 ITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGA 203 (299)
T ss_dssp EETTGGGCEEEEECCBCSSSCCBCCBSEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHHHHTTC
T ss_pred echhHCCEEEEEecccccccccCCCCcceeEEEecHHHHHHHHhCCCeEEECCeeECCCCCEEEECHHHHHHHHHHHcCC
Confidence 7766532111 00 012 335578999999999984 34444 5999999999999999
Q ss_pred ceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC---C--CCCchHHHHHHHHhCCCc-EEEEecCCCchH-HHHhc
Q 027731 126 EVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---D--LSVMDMTAITLCQENNIP-VVVFNLNQPGNI-AKAIQ 198 (219)
Q Consensus 126 d~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~---g--~~~~k~~aa~~a~~~gi~-v~I~~g~~~~~i-~~~l~ 198 (219)
|+|+|||||||||++||+ ++++|++++++|+.++ + +|.+|++|+..+.++|++ ++|+|+++|+.+ .++|+
T Consensus 204 d~liilTDVdGV~~~dP~---~~~~i~~is~~e~~~l~~~~~ggM~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~ 280 (299)
T 2ap9_A 204 EKLLMLTDIDGLYTRWPD---RDSLVSEIDTGTLAQLLPTLELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFT 280 (299)
T ss_dssp SEEEEEESSSSEETTTTC---TTCEESEEEHHHHHHHGGGSCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHS
T ss_pred CEEEEEeCChhhhcCCCC---CCcChhhcCHHHHHHHHHhhcCchHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhc
Confidence 999999999999999997 4689999999988764 3 445589999999999998 999999999987 78999
Q ss_pred CCCCceEEecCC
Q 027731 199 GERVGTLIGGTW 210 (219)
Q Consensus 199 g~~~GT~i~~~~ 210 (219)
|+..||+|.++.
T Consensus 281 ~~~~GT~i~~~~ 292 (299)
T 2ap9_A 281 DAGTGTKVVRGE 292 (299)
T ss_dssp CCCCSEEEECCC
T ss_pred CCCCcEEEecCC
Confidence 999999998653
No 17
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=100.00 E-value=2.3e-32 Score=228.03 Aligned_cols=195 Identities=23% Similarity=0.358 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHhHHHhcc-CCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRGASAAGN-SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV 80 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~ 80 (219)
+++++|+++++. +++|||||||++++++..++. .+++....+...+.+..++..++...|+++|++.+ +..++
T Consensus 58 ~la~~I~~l~~~-~~vVlVhGGg~~~~~~~~~~~~~g~~~~~~~~~~~~a~G~~~l~~~~~l~~~G~~~v-----t~~d~ 131 (270)
T 2ogx_B 58 PLVDEIVAARKN-HKLLIGTGAGTRARHLYSIAAGLGLPAGVLAQLGSSVADQNAAMLGQLLAKHGIPVV-----GGAGL 131 (270)
T ss_dssp HHHHHHHHHTTT-CEEEEEECCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBC-----CSSTT
T ss_pred HHHHHHHHHhcC-CcEEEEECChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCcee-----cHhhH
Confidence 589999999887 999999999998776554432 35644444555555555677777778888998732 11122
Q ss_pred cchHHHHHHHHHHhCCCEEEEeCCCC------------CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCC
Q 027731 81 AEPYIRRRAVRHLEKGRVVIFAAGTG------------NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNA 148 (219)
Q Consensus 81 ~~~~~~~~~~~~l~~g~ipIv~g~~g------------~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a 148 (219)
. .+.++|+.|.|||++|+.+ ++++++|++|+++|.+++||+|+|+|||||||++||+.+|++
T Consensus 132 ~------~i~~lL~~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~a 205 (270)
T 2ogx_B 132 S------AVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDA 205 (270)
T ss_dssp C------HHHHHCTTCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTTC
T ss_pred H------HHHHHHhCCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCCC
Confidence 1 3557899999999998621 356999999999999999999999999999999999999999
Q ss_pred cccccccHHHHhhCC--CCCchHHHHHHHH--hCCCcEEEEecCCCchHHHHhcCCCCceEEec
Q 027731 149 RLLDTLTYQEVTSKD--LSVMDMTAITLCQ--ENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 208 (219)
Q Consensus 149 ~~i~~i~~~e~~~~g--~~~~k~~aa~~a~--~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 208 (219)
++|++++++|+.++. +..++......+. ..+++++|+|+++|+.+.++|+|+.+||+|.+
T Consensus 206 ~~i~~i~~~e~~~~~~~g~~~~ggm~~kl~aa~~~~~v~I~~g~~~~~l~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 206 TFIPRISVDEMKAKGLHDSILEFPVLDLLQSAQHVREVQVVNGLVPGNLTRALAGEHVGTIITA 269 (270)
T ss_dssp CEESEEEHHHHHHTTCCCTTSCHHHHHHHHHCSSCCEEEEEETTSTTHHHHHHTTCCCSEEEEC
T ss_pred eEcceeCHHHHHHHhcCCCcccHHHHHHHHHhhcCCcEEEEeCCCchHHHHHHcCCCCCeEecC
Confidence 999999999988762 2244433333322 25679999999999999999999999999975
No 18
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-32 Score=232.41 Aligned_cols=203 Identities=16% Similarity=0.267 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHH-HhHHHhcc-----CCCCc---ChHHHHHHHH-HHHHHHHHHHHHHhcCCCeeE
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIF-RGASAAGN-----SGLDR---SSADYIGMLA-TVMNAIFLQATMESIGIPTRV 71 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~-~~~~~~~~-----~~~~~---~~~~~~~~~~-~~~~~~l~~~~l~~~gi~a~~ 71 (219)
+++++|+++++.|+++|||||||++. ..+..++. .|++. .+.+.+++++ ..+|.. +...|+++|+++++
T Consensus 56 ~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~~~~~~~~~~~g~R~t~~~~l~~~~~~~~G~~n~~-l~~~l~~~g~~a~~ 134 (298)
T 2rd5_A 56 SVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKN-LVSLINAAGATAVG 134 (298)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHTHHHH-HHHHHHHTTSCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCcHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHHhchHHHH-HHHHHHhCCCCccc
Confidence 57899999999999999999999855 33444441 12221 2345555554 456665 45799999999988
Q ss_pred eccccccc-----------ccc----hHHH-HHHHHHHhCCCEEEEeCC----CCCCc-cChHHHHHHHHHhcCCceEEe
Q 027731 72 QTAFRMSE-----------VAE----PYIR-RRAVRHLEKGRVVIFAAG----TGNPF-FTTDTAAALRCAEINAEVVLK 130 (219)
Q Consensus 72 ~~~~~~~~-----------~~~----~~~~-~~~~~~l~~g~ipIv~g~----~g~~~-~~sD~~Aa~lA~~l~Ad~lii 130 (219)
+++.+... +.. .+++ +.+.++|+.|.|||+++. .|..+ +++|++|+++|.+|+||+|+|
T Consensus 135 l~~~~~~~l~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~Lii 214 (298)
T 2rd5_A 135 LSGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLIL 214 (298)
T ss_dssp EETTGGGCEEEEECTTHHHHBSEEEEEEECGGGHHHHHHTTCEEEEESEEECTTSCEEEECHHHHHHHHHHHHTCSEEEE
T ss_pred cChHHCCEEEEEeCCccccCCcceEEEEECHHHHHHHHhCCCEEEEcCeeECCCCCEEEECHHHHHHHHHHHcCCCEEEE
Confidence 77554321 110 1123 235578999999999984 34444 499999999999999999999
Q ss_pred eeccCccccCCCCCCCCCcccccccHHHHhhC-------CCCCchHHHHHHHHhCCCc-EEEEecCCCchH-HHHhcCCC
Q 027731 131 ATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENNIP-VVVFNLNQPGNI-AKAIQGER 201 (219)
Q Consensus 131 ltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~-------g~~~~k~~aa~~a~~~gi~-v~I~~g~~~~~i-~~~l~g~~ 201 (219)
+|||||||++||+ | +++|++++++|+.++ |+|..|++++..+.++|++ ++|+|++.|+.| .++|+|+.
T Consensus 215 lTdVdGVy~~dp~--~-a~~i~~is~~e~~~~~~~g~~~gGM~~Kl~aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~ 291 (298)
T 2rd5_A 215 LTDVAGILENKED--P-SSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEG 291 (298)
T ss_dssp EESSSSEESSSSC--T-TSEECEEEHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHSSSC
T ss_pred EeCCcCeecCCCC--C-CCCcccCCHHHHHHHHHCCCCCCchHHHHHHHHHHHHcCCCeEEEecCCCCchHHHHHhcCCC
Confidence 9999999999997 4 899999999987653 3345589999999999998 999999999999 79999999
Q ss_pred CceEEec
Q 027731 202 VGTLIGG 208 (219)
Q Consensus 202 ~GT~i~~ 208 (219)
.||+|.+
T Consensus 292 ~GT~i~~ 298 (298)
T 2rd5_A 292 AGTMITG 298 (298)
T ss_dssp SEEEEEC
T ss_pred CceEEeC
Confidence 9999974
No 19
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=100.00 E-value=2.9e-33 Score=230.92 Aligned_cols=188 Identities=21% Similarity=0.258 Sum_probs=144.3
Q ss_pred CCCeEE-EEECCchHHHh-HHHhccCCCCcCh--HHHHHHH-----HHHHHHHHHHHHHHhcCCCeeEecccccccccch
Q 027731 13 LGIEVA-IVVGGGNIFRG-ASAAGNSGLDRSS--ADYIGML-----ATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEP 83 (219)
Q Consensus 13 ~g~~vv-iV~GgG~~~~~-~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~~~ 83 (219)
.|+++| ||||||++++. ...+ |++... .+..++. ...+|..++ ++|.++|+++.++++.+.....+.
T Consensus 38 ~G~~vv~lVhGGG~~~~~~~~~~---gi~~~~~~~d~~gl~~t~~~~~~ln~~~v-~~l~~~G~~a~~l~~~~~~~~g~v 113 (249)
T 3ll5_A 38 GIEDLVCVVHGGGSFGHIKAMEF---GLPGPKNPRSSIGYSIVHRDMENLDLMVI-DAMIEMGMRPISVPISALRYDGRF 113 (249)
T ss_dssp TCTTEEEEEECCGGGTHHHHHHH---TCSEECCHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCCEEECCGGGSCBSSSB
T ss_pred cCCceEEEEECccHHHHHHHHHh---CCCcCCCccccccHHHHHHHHHHHHHHHH-HHHHHCCCcEEEEcHHHcccccEE
Confidence 399999 99999998765 2333 455432 2333332 237788777 789999999998877665433322
Q ss_pred HHHHHHHHHHhCCCEEEEeCC-----CC-CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHH
Q 027731 84 YIRRRAVRHLEKGRVVIFAAG-----TG-NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQ 157 (219)
Q Consensus 84 ~~~~~~~~~l~~g~ipIv~g~-----~g-~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~ 157 (219)
-.+.+..+|+.|.|||++|+ .+ ..++++|++|+++|.+|+||+|+|+|||||||++||+.+|++++++++..
T Consensus 114 -~~~~i~~ll~~g~ipVi~~~~~~~~~~~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~~- 191 (249)
T 3ll5_A 114 -DYTPLIRYIDAGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDT- 191 (249)
T ss_dssp -CCHHHHHHHHTTCEEEEECEEEEEETTEEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEECC-
T ss_pred -cHHHHHHHHHCCCEEEECCCEEEcCCCceeeecHHHHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHHH-
Confidence 11345679999999999973 11 34789999999999999999999999999999999999999999999952
Q ss_pred HHhh-----C--CCCCchHHHHHHH-HhCCCcEEEEecCCCchHHHHhcCCCC-ceEEe
Q 027731 158 EVTS-----K--DLSVMDMTAITLC-QENNIPVVVFNLNQPGNIAKAIQGERV-GTLIG 207 (219)
Q Consensus 158 e~~~-----~--g~~~~k~~aa~~a-~~~gi~v~I~~g~~~~~i~~~l~g~~~-GT~i~ 207 (219)
++.. . |+|..|+++|..+ .++|++++|+|+++|+.+.+ |.|+.+ ||+|+
T Consensus 192 ~~~~~~~~~~~tGgM~~Kl~aA~~a~~~~Gv~v~I~~g~~~~~l~~-l~g~~~~GT~i~ 249 (249)
T 3ll5_A 192 NITFDRVQNDVTGGIGKKFESMVKMKSSVKNGVYLINGNHPERIGD-IGKESFIGTVIR 249 (249)
T ss_dssp CC-------------HHHHHHHHHHHTTCTTCEEEEETTSGGGGGG-TTSTTCCSEEEC
T ss_pred HHhcccCCCeeECCHHHHHHHHHHHHHhcCCEEEEEeCCChhHHHH-hCCCCCCCEEeC
Confidence 2211 1 5667799999998 89999999999999999999 999888 99984
No 20
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=100.00 E-value=3e-32 Score=227.29 Aligned_cols=200 Identities=18% Similarity=0.208 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHH-hHHHhccC--------CC--CcChHHHHHHHHH----HHHHHHHHHHHHhcC
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFR-GASAAGNS--------GL--DRSSADYIGMLAT----VMNAIFLQATMESIG 66 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~-~~~~~~~~--------~~--~~~~~~~~~~~~~----~~~~~l~~~~l~~~g 66 (219)
+++++|+.+++.|+++|||||||++.+ .+..++.. |+ +.++...++++.+ .++. .+.+.|+++|
T Consensus 16 ~~~~~i~~l~~~G~~vViVhGgg~~~~~~~~~~~~~~~~~~~~~g~~~rvt~~~~l~~~~~~~~G~i~~-~l~~~l~~~G 94 (269)
T 2egx_A 16 AVAKDAASLWKEGVKLLLVHGGSAETNKVAEALGHPPRFLTHPGGQVSRLTDRKTLEIFEMVYCGLVNK-RLVELLQKEG 94 (269)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHTTCCCCC-------CCCCCCHHHHHHHHHHHHTHHHH-HHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCeEEEEECChHHHHHHHHHcCCccccccccCCccCcCCCHHHHHHHHHHHHhHHHH-HHHHHHHHCC
Confidence 589999999999999999999998653 33443311 12 2233344444433 3443 4567999999
Q ss_pred CCeeEeccccccccc------------------------c-hHHHHH-HHHHHhCCCEEEEeCC----CC-CCccChHHH
Q 027731 67 IPTRVQTAFRMSEVA------------------------E-PYIRRR-AVRHLEKGRVVIFAAG----TG-NPFFTTDTA 115 (219)
Q Consensus 67 i~a~~~~~~~~~~~~------------------------~-~~~~~~-~~~~l~~g~ipIv~g~----~g-~~~~~sD~~ 115 (219)
+++..+++.+...+. + .+++.+ +..+|+.|.|||+++. .| ..++++|++
T Consensus 95 ~~a~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~D~g~~g~i~~v~~~~i~~ll~~g~ipVi~~v~~~~~g~~~~~~~D~~ 174 (269)
T 2egx_A 95 ANAIGLSGLDGRLFVGRRKTAVKYVENGKVKVHRGDYTGTVEEVNKALLDLLLQAGYLPVLTPPALSYENEAINTDGDQI 174 (269)
T ss_dssp CCEEEEETTGGGCEEECBC----------------CCEECCCEECHHHHHHHHHTTCEEEEECCEEETTSCEEEECHHHH
T ss_pred CCeEEeCCCCccceeeeecccccccccccccCCcCCCCCCceEECHHHHHHHHHCCCEEEEcCcEECCCCCEEEeCHHHH
Confidence 999987766532111 0 123333 4578999999999973 23 356999999
Q ss_pred HHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHh--hC---CC--CCchHHHHHHHHhCCC-cEEEEec
Q 027731 116 AALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVT--SK---DL--SVMDMTAITLCQENNI-PVVVFNL 187 (219)
Q Consensus 116 Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~--~~---g~--~~~k~~aa~~a~~~gi-~v~I~~g 187 (219)
|+++|.+|+||+|+|+|||||||+ || .|++++|++++++|+. ++ ++ |..|++|+..|.++|+ +++|+|+
T Consensus 175 Aa~lA~~l~Ad~li~lTdVdGv~~-dp--~~~a~~i~~i~~~e~~~~~l~~~~~ggm~~Kl~aa~~a~~~gv~~v~I~~g 251 (269)
T 2egx_A 175 AALLATLYGAEALVYLSNVPGLLA-RY--PDEASLVREIPVERIEDPEYLALAQGRMKRKVMGAVEAVKGGVKRVVFADG 251 (269)
T ss_dssp HHHHHHHHTCSEEEEEESSSSCBC---------CBCCEECHHHHHCHHHHTTSCHHHHHHHHHHHHHHHTTCSCEEEEES
T ss_pred HHHHHHHcCCCEEEEEeCchhhhc-CC--CCCccccccCCHHHhhHHHhcCCCCCchHHHHHHHHHHHHcCCCeEEEEeC
Confidence 999999999999999999999999 89 3789999999999988 53 33 4458899999999999 8999999
Q ss_pred CCCchHHHHhcCCCCceEEe
Q 027731 188 NQPGNIAKAIQGERVGTLIG 207 (219)
Q Consensus 188 ~~~~~i~~~l~g~~~GT~i~ 207 (219)
++|+.+.+++.| .||+|.
T Consensus 252 ~~~~~l~~~l~g--~GT~i~ 269 (269)
T 2egx_A 252 RVENPIRRALSG--EGTVVR 269 (269)
T ss_dssp SSSSHHHHHHTT--CSEEEC
T ss_pred CCchHHHHHhCC--CCeEEC
Confidence 999999998977 899984
No 21
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=100.00 E-value=4.5e-32 Score=231.26 Aligned_cols=205 Identities=18% Similarity=0.250 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHH-hHHHhcc-----CCCC---cChHHHHHHHH-HHHHHHHHHHHHHhcCCCeeE
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFR-GASAAGN-----SGLD---RSSADYIGMLA-TVMNAIFLQATMESIGIPTRV 71 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~-~~~~~~~-----~~~~---~~~~~~~~~~~-~~~~~~l~~~~l~~~gi~a~~ 71 (219)
+++++|+.+++.|+++|||||||++.+ .+..++. .|++ +.+.+.+++++ ..+|..+ ...|+++|+++++
T Consensus 69 ~l~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~g~Rvt~~~~l~~~~~~~~G~in~~l-~~~L~~~g~~a~g 147 (321)
T 2v5h_A 69 AVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDI-VSRINTTGGRAVG 147 (321)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCBSSSSBCBCHHHHHHHHHHHHHTHHHHH-HHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHHhChHHHHH-HHHHHhCCCCeee
Confidence 578999999999999999999998654 3444431 1222 12345555544 4566654 5799999999887
Q ss_pred ecccccc----------cccc----hHHH-HHHHHHHhCCCEEEEeCC----CCCCcc-ChHHHHHHHHHhcCCceEEee
Q 027731 72 QTAFRMS----------EVAE----PYIR-RRAVRHLEKGRVVIFAAG----TGNPFF-TTDTAAALRCAEINAEVVLKA 131 (219)
Q Consensus 72 ~~~~~~~----------~~~~----~~~~-~~~~~~l~~g~ipIv~g~----~g~~~~-~sD~~Aa~lA~~l~Ad~liil 131 (219)
+++.+.. ++.. ..++ +.+..+|+.|.|||+++. .|..++ ++|++|+++|.+|+||+|+|+
T Consensus 148 l~~~~a~~l~a~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA~~l~Ad~Liil 227 (321)
T 2v5h_A 148 FCGTDGRLVLARPHDQEGIGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILL 227 (321)
T ss_dssp ECTTGGGSEEEEECSSCSSBSBEEEEEECGGGTHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEE
T ss_pred eChhhccEEEeecCCCccccccceeEEecHHHHHHHHHCCCeEEEeCceECCCCCEEEeCHHHHHHHHHHHcCCCEEEEe
Confidence 7655321 2211 0122 234578999999999963 334554 999999999999999999999
Q ss_pred eccCccccCCCCCCCCCcccccccHHHHhhC-------CCCCchHHHHHHHHhCCCc-EEEEecCCCchH-HHHhcCCCC
Q 027731 132 TNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENNIP-VVVFNLNQPGNI-AKAIQGERV 202 (219)
Q Consensus 132 tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~-------g~~~~k~~aa~~a~~~gi~-v~I~~g~~~~~i-~~~l~g~~~ 202 (219)
|||||||++||+ ++++|++++++|+.++ |+|.+|++|+..|.++|++ ++|+|++.|+.+ .++|+++..
T Consensus 228 TDVdGVy~~dp~---~a~~i~~is~~e~~~l~~~g~~~gGM~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~ 304 (321)
T 2v5h_A 228 TDTRGILEDPKR---PESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGI 304 (321)
T ss_dssp ESSSSCBSSTTC---TTCBCCEEEHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCCS
T ss_pred eCCCceEcCCCC---CCeeeeEEcHHHHHHHHhCCCCcCcHHHHHHHHHHHHHcCCCEEEEEeCCCCchHHHHHhcCCCC
Confidence 999999999997 4899999999987653 2344489999999999998 999999999998 789999889
Q ss_pred ceEEecCC
Q 027731 203 GTLIGGTW 210 (219)
Q Consensus 203 GT~i~~~~ 210 (219)
||+|.++.
T Consensus 305 GT~I~~~~ 312 (321)
T 2v5h_A 305 GTMIVGSG 312 (321)
T ss_dssp EEEEECC-
T ss_pred ceEEECCc
Confidence 99998754
No 22
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=99.98 E-value=1.9e-32 Score=227.90 Aligned_cols=194 Identities=22% Similarity=0.221 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHCC------CeEEEEECCchHHHh-HHHhccCCCCcC---hHHH--HHHHHH-----HHHHHHHHHHHHh
Q 027731 2 AIAREVASVTRLG------IEVAIVVGGGNIFRG-ASAAGNSGLDRS---SADY--IGMLAT-----VMNAIFLQATMES 64 (219)
Q Consensus 2 ~la~~i~~l~~~g------~~vviV~GgG~~~~~-~~~~~~~~~~~~---~~~~--~~~~~~-----~~~~~l~~~~l~~ 64 (219)
+++++|+++++.| .++|||||||++++. ..+++ +.++ +.+. .++..+ .+|..+ .++|.+
T Consensus 34 ~la~~i~~l~~~G~~~~~~~~vVlVhGGG~~~~~~~~~lg---i~~~~~~~~~~~~~G~r~T~~a~~~ln~~l-~~~l~~ 109 (266)
T 3k4o_A 34 RIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHPVAKKYL---KIEDGKKIFINMEKGFWEIQRAMRRFNNII-IDTLQS 109 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHHHHHGGGE---EECSSSEEECCHHHHHHHHHHHHHHHHHHH-HHHHHT
T ss_pred HHHHHHHHHHhccccccCCCCEEEEeCchHHHHHHHHHcC---CCcccCcccccccCceeHHHHHHHHHHHHH-HHHHHH
Confidence 5899999998888 999999999999776 34443 5443 1121 333333 478775 579999
Q ss_pred cCCCeeEecccccccccc-hHHH-HHHHHHHhCCCEEEEeCC----C--CCCccChHHHHHHHHHhcCCceEEeeeccCc
Q 027731 65 IGIPTRVQTAFRMSEVAE-PYIR-RRAVRHLEKGRVVIFAAG----T--GNPFFTTDTAAALRCAEINAEVVLKATNVDG 136 (219)
Q Consensus 65 ~gi~a~~~~~~~~~~~~~-~~~~-~~~~~~l~~g~ipIv~g~----~--g~~~~~sD~~Aa~lA~~l~Ad~liiltDV~G 136 (219)
+|+++.++++.+...... .+++ +.+..+|+.|.|||++++ . +.+++++|++|+++|.+|+||+|+|+|||||
T Consensus 110 ~G~~a~~l~~~d~~~~~~g~~v~~~~i~~lL~~g~ipVi~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdG 189 (266)
T 3k4o_A 110 YDIPAVSIQPSSFVVFGDKLIFDTSAIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYATDVDG 189 (266)
T ss_dssp TTCCEEEECGGGTCEESSSCBCCCHHHHHHHHTTCEEEEECEEEEESSSCEEEECHHHHHHHHHHHHTCSEEEEEESSSS
T ss_pred CCCcEEEeeHHHcCcccCceEecHHHHHHHHHCCCEEEEeCCEEEcCCCCeeeeCHHHHHHHHHHHcCCCEEEEEecCCe
Confidence 999999888765432210 1222 446679999999999983 1 2467999999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccccHH---HHhh--------C--CCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCc
Q 027731 137 VYDDNPRRNPNARLLDTLTYQ---EVTS--------K--DLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVG 203 (219)
Q Consensus 137 v~~~dP~~~~~a~~i~~i~~~---e~~~--------~--g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~G 203 (219)
|| +||+..| +++.. ++.+ . |+|..|++++..+.+ +++|+|+++|+.|.++|+|+.+|
T Consensus 190 v~-~d~~~i~------~~~~~e~~~l~~~~~~~~~~~~tGGM~~Kv~aa~~a~~---~v~I~~g~~~~~l~~~l~g~~~G 259 (266)
T 3k4o_A 190 VL-IDNKPIK------RIDKNNIYKILNYLSGSNSIDVTGGMKYKIEMIRKNKC---RGFVFNGNKANNIYKALLGEVEG 259 (266)
T ss_dssp SB-SSSSBCS------EECTTTHHHHHHHHHSTTCSCCSSHHHHHHHHHHHTTC---EEEEEETTSTTHHHHHHTTCCCS
T ss_pred EE-eCCeecC------cCCHHHHHHHHHHhccccCCcccCCHHHHHHHHHHHhc---CEEEEeCCCccHHHHHhCCCCCc
Confidence 99 7875544 44332 2211 1 335569999988776 99999999999999999999999
Q ss_pred eEEecC
Q 027731 204 TLIGGT 209 (219)
Q Consensus 204 T~i~~~ 209 (219)
|+|.+.
T Consensus 260 T~i~~~ 265 (266)
T 3k4o_A 260 TEIDFS 265 (266)
T ss_dssp EEEECC
T ss_pred eEEEeC
Confidence 999874
No 23
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=99.97 E-value=5.7e-31 Score=220.96 Aligned_cols=200 Identities=20% Similarity=0.241 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHH-HhHHHhcc-----CCCCc---ChHHHHHHHH-HHHHHHHHHHHHHhcCCCeeE
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIF-RGASAAGN-----SGLDR---SSADYIGMLA-TVMNAIFLQATMESIGIPTRV 71 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~-~~~~~~~~-----~~~~~---~~~~~~~~~~-~~~~~~l~~~~l~~~gi~a~~ 71 (219)
+++++|+.+++.|+++|||||||++. ..+..++. .|++. .+.+.+++++ ..+|.. +...|+++|+++++
T Consensus 41 ~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~~~~~~~~~g~r~t~~~~l~~~~~~~~G~~~~~-l~~~l~~~g~~a~~ 119 (282)
T 2bty_A 41 AFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKE-IVMNLNLHGGRAVG 119 (282)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSHHHHHHHHHHTCCCCBSSSSBCBCHHHHHHHHHHHHHTHHHH-HHHHHHTTTCCEEE
T ss_pred HHHHHHHHHHHCCCcEEEEECCcHHHHHHHHHcCCCccccCCcccCCHHHHHHHHHHHhhHHHHH-HHHHHHhCCCCcee
Confidence 57899999999999999999999854 44444442 12222 2345555544 345555 56799999999988
Q ss_pred ecccccc-----------cccc----hHHH-HHHHHHHhCCCEEEEeCC----CCCCc-cChHHHHHHHHHhcCCceEEe
Q 027731 72 QTAFRMS-----------EVAE----PYIR-RRAVRHLEKGRVVIFAAG----TGNPF-FTTDTAAALRCAEINAEVVLK 130 (219)
Q Consensus 72 ~~~~~~~-----------~~~~----~~~~-~~~~~~l~~g~ipIv~g~----~g~~~-~~sD~~Aa~lA~~l~Ad~lii 130 (219)
+++.+.. ++.. .+++ +.+.++|+.|.|||++++ .|..+ +++|++|+++|.+|+||+|+|
T Consensus 120 l~~~~~~~l~~~~~~~~~d~g~~g~v~~~~~~~i~~ll~~g~IpVi~~v~~~~~G~~~~~~~D~~Aa~lA~~l~Ad~lii 199 (282)
T 2bty_A 120 ICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLIL 199 (282)
T ss_dssp EETTGGGSEEEEECCTTCCCBSBEEEEEECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHHHHHHHHHHHHTCSEEEE
T ss_pred cChhhCCEEEEecCCcccCCCcceEEEEecHHHHHHHHHCCCEEEECCCccCCCCCEEEECHHHHHHHHHHHcCCCEEEE
Confidence 7655432 1111 1233 335578999999999984 33344 599999999999999999999
Q ss_pred eeccCccccCCCCCCCCCcccccccHHHHhhC-------CCCCchHHHHHHHHhCCCc-EEEEecCCCchH-HHHhcCCC
Q 027731 131 ATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENNIP-VVVFNLNQPGNI-AKAIQGER 201 (219)
Q Consensus 131 ltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~-------g~~~~k~~aa~~a~~~gi~-v~I~~g~~~~~i-~~~l~g~~ 201 (219)
+|||||||++ | ++|++++++|+.++ |+|.+|++|+..|.++|++ ++|+|++.|+.+ .++++++.
T Consensus 200 lTDVdGvy~~-----~--~~i~~i~~~e~~~~~~~g~~~gGM~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~ 272 (282)
T 2bty_A 200 LTDVDGVLKD-----G--KLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKG 272 (282)
T ss_dssp EESSSSCEET-----T--EECCEECHHHHHHHHTTTCSCTTHHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSC
T ss_pred EeCCCCeecC-----c--hhhhhCCHHHHHHHHHcCCCCCcHHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHHhcCCC
Confidence 9999999996 2 89999999987653 3355599999999999998 999999999998 78999989
Q ss_pred CceEEecC
Q 027731 202 VGTLIGGT 209 (219)
Q Consensus 202 ~GT~i~~~ 209 (219)
.||+|.++
T Consensus 273 ~GT~i~~~ 280 (282)
T 2bty_A 273 IGTMIKEL 280 (282)
T ss_dssp SSEEECCC
T ss_pred CceEEEeC
Confidence 99999764
No 24
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=99.97 E-value=5e-31 Score=241.14 Aligned_cols=199 Identities=23% Similarity=0.274 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHCCCeEEEEECC-chHHHhHHH-hccCCCCcChHHHHHH---HHHHHHHHHHHHHHHhcCCCeeEecccc
Q 027731 2 AIAREVASVTRLGIEVAIVVGG-GNIFRGASA-AGNSGLDRSSADYIGM---LATVMNAIFLQATMESIGIPTRVQTAFR 76 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~Gg-G~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~l~~~gi~a~~~~~~~ 76 (219)
+++++|+++++.|+++|||||| |...+.+.. .....-+. +...+++ .++.+|..+++.+|+++|+++.++++.+
T Consensus 21 ~va~~i~~~~~~g~~vvvV~sa~G~~t~~ll~~~~~~~~~~-~~~~~d~l~s~Ge~~s~~l~~~~l~~~G~~a~~l~~~~ 99 (600)
T 3l76_A 21 AVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQISPNP-CRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQ 99 (600)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSSTHHHHHHHHHHHHCSSC-CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGG
T ss_pred HHHHHHHHHHHCCCcEEEEECCCcHHHHHHHHHHHhhccCC-CHHHHHHHHHHhHHHHHHHHHHHHHhCCCCeEEechhH
Confidence 6899999999999999999998 776544322 21111122 2333444 4457999999999999999999888776
Q ss_pred cccccchH--------HH-HHHHHHHhCCCEEEEeCCC-----C------CCccChHHHHHHHHHhcCCceEEeeeccCc
Q 027731 77 MSEVAEPY--------IR-RRAVRHLEKGRVVIFAAGT-----G------NPFFTTDTAAALRCAEINAEVVLKATNVDG 136 (219)
Q Consensus 77 ~~~~~~~~--------~~-~~~~~~l~~g~ipIv~g~~-----g------~~~~~sD~~Aa~lA~~l~Ad~liiltDV~G 136 (219)
...+...+ ++ +.+.++|+.|.|||++|+. | ..+++||++|+.+|.+|+||+|++||||||
T Consensus 100 ~~l~~~~~~~~~~~~~~~~~~i~~ll~~g~IpVv~Gf~g~~~~g~~~~~tlgrGgsD~~Aa~lA~~l~Ad~l~i~TDVdG 179 (600)
T 3l76_A 100 VGIVTEAEHSRARILEIRPDRLEHHLREGKVVVVAGFQGISSVEHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPG 179 (600)
T ss_dssp TEEEEC-------CCEEEECCHHHHHTTTCEEEEECEEEC----CEEEECCCTTHHHHHHHHHHHHHTCSEEEEEESSSS
T ss_pred cceEEecCCCCceeccccHHHHHHHHhCCCEEEEECCeecCCCCCEEEecCCCCChHHHHHHHHHHcCCCEEEEEECCCc
Confidence 53222111 11 3456789999999998752 2 235679999999999999999999999999
Q ss_pred cccCCCCCCCCCcccccccHHHHhhC---CCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEecCCC
Q 027731 137 VYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTWN 211 (219)
Q Consensus 137 v~~~dP~~~~~a~~i~~i~~~e~~~~---g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~~~~ 211 (219)
||++||+.+|++++|++++++|+.++ |.++|+++|+.+|.++|+|++|.|++++ ..||+|.++..
T Consensus 180 v~~~dPr~~~~a~~i~~is~~e~~ela~~G~~vm~p~a~~~a~~~gipv~I~n~~~~----------~~GT~I~~~~~ 247 (600)
T 3l76_A 180 ILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSD----------EPGTKVVAPPV 247 (600)
T ss_dssp CBSSCTTTCTTCCBCSEEEHHHHHHTGGGGTTTCCHHHHHHHHHHTCCEEEEETTCC----------SCCEEEECCCC
T ss_pred CCCCCCCCCCCCeEeeEEcHHHHHHHHhCCCCccHHHHHHHHHHCCCeEEEEECCCC----------CCCeEEecCCc
Confidence 99999999999999999999998875 8899999999999999999999999874 47999987653
No 25
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=99.97 E-value=1.7e-30 Score=229.20 Aligned_cols=198 Identities=23% Similarity=0.333 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHCCCeEEEEEC-CchHHHh-HHHhcc--CCCCcChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccc
Q 027731 2 AIAREVASVTRLGIEVAIVVG-GGNIFRG-ASAAGN--SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRM 77 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~G-gG~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~ 77 (219)
+++++|+.+++.|+++||||| +|.+.+. +...+. ...+.+..+.+.+.++.++..++..+|+++|+++.++++.+.
T Consensus 21 ~v~~~i~~l~~~g~~~vvV~sa~g~~~~~ll~~~~~~~~~~~~~~~d~~~a~Ge~~~~~ll~~~L~~~G~~a~~l~~~~~ 100 (421)
T 3ab4_A 21 NVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAREMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQA 100 (421)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSTTHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECCCC--
T ss_pred HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEehhhc
Confidence 578999999999999999997 4665443 232221 112223344444456678888888999999999988776654
Q ss_pred cccc-chH-------HH-HHHHHHHhCCCEEEEeCC-----C-CC----CccChHHHHHHHHHhcCCceEEeeeccCccc
Q 027731 78 SEVA-EPY-------IR-RRAVRHLEKGRVVIFAAG-----T-GN----PFFTTDTAAALRCAEINAEVVLKATNVDGVY 138 (219)
Q Consensus 78 ~~~~-~~~-------~~-~~~~~~l~~g~ipIv~g~-----~-g~----~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~ 138 (219)
..+. +++ ++ +.+.++|+.|.|||++|+ . |. .++++|++|+.+|.+|+||+|+|||||||||
T Consensus 101 ~~~t~~~~~~~~v~~~~~~~i~~~l~~g~ipVv~g~~g~~~~~g~~~tlgrg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~ 180 (421)
T 3ab4_A 101 GVLTTERHGNARIVDVTPGRVREALDEGKICIVAGFQGVNKETRDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVY 180 (421)
T ss_dssp ---------------CCHHHHHHHHHTTCEEEC------------------CCHHHHHHHHHHHHTCSEEEEEESCCSCB
T ss_pred eEEeccCCCCeeechhhHHHHHHHHhCCCEEEEeCCcCcCCCCCceEEeCCCCHHHHHHHHHHHCCCCEEEEEECCCccC
Confidence 2111 111 11 345578999999999886 2 32 3469999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccccHHHHhhC---CCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcCCCCceEEecC
Q 027731 139 DDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGT 209 (219)
Q Consensus 139 ~~dP~~~~~a~~i~~i~~~e~~~~---g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 209 (219)
++||+.+|++++|++++++|+.++ |.+++|++|+.+|.++|+|++|.|+++| ..||+|.++
T Consensus 181 ~~dPr~~~~a~~i~~is~~e~~el~~~Ga~v~~~~a~~~a~~~gi~v~I~n~~~~----------~~GT~I~~~ 244 (421)
T 3ab4_A 181 TADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSN----------DPGTLIAGS 244 (421)
T ss_dssp SSCTTTSTTCCBCSEECHHHHHHHHHTTCCSSCHHHHHHHHHTTCCEEEEESSSC----------CCCEEECSC
T ss_pred cCCCCCCCCCeEccccCHHHHHHHHhcCCcCchHHHHHHHHHcCCCEEEecCcCC----------CCCeEEEec
Confidence 999999999999999999998774 8889999999999999999999999987 479999875
No 26
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=99.97 E-value=1.7e-30 Score=219.80 Aligned_cols=202 Identities=17% Similarity=0.233 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHH-HhHHHhcc-----CCCCc---ChHHHHHHHH-HHHHHHHHHHHHHhcCCCeeE
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIF-RGASAAGN-----SGLDR---SSADYIGMLA-TVMNAIFLQATMESIGIPTRV 71 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~-~~~~~~~~-----~~~~~---~~~~~~~~~~-~~~~~~l~~~~l~~~gi~a~~ 71 (219)
+++++|+.+++.|+++|||||||++. ..+..++. .|++. .+.+.+++++ ..++. .+...|+++|++++.
T Consensus 46 ~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~g~~~~~~~g~rvt~~~~l~~~~~~~~G~~~~-~l~~~l~~~g~~a~~ 124 (300)
T 2buf_A 46 GFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNK-DIVNLINRHGGSAIG 124 (300)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHTTCCCCBSSSSBCBCHHHHHHHHHHHHHTHHH-HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCEEE
Confidence 58999999999999999999999854 44444442 12222 2345555554 34554 456799999999887
Q ss_pred ecccccc----------------------cccc----hHHHHH-HHHHHhCCCEEEEeCC----CCCCc-cChHHHHHHH
Q 027731 72 QTAFRMS----------------------EVAE----PYIRRR-AVRHLEKGRVVIFAAG----TGNPF-FTTDTAAALR 119 (219)
Q Consensus 72 ~~~~~~~----------------------~~~~----~~~~~~-~~~~l~~g~ipIv~g~----~g~~~-~~sD~~Aa~l 119 (219)
+++.+.. ++.. .+++.+ +..+|+.|.|||+++. .|..+ +++|++|+++
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~l 204 (300)
T 2buf_A 125 LTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKV 204 (300)
T ss_dssp EEETGGGCEEEEECCCCCC--------CCCCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTTSCEEECCHHHHHHHH
T ss_pred ecCCCCCeeeeeeccccccchhhcccccccCCcceeEEEECHHHHHHHHHCCCEEEEcCceeCCCCCEEEECHHHHHHHH
Confidence 7655321 1110 123434 4468999999999963 34444 5999999999
Q ss_pred HHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC-------CCCCchHHHHHHHHhCCCc-EEEEecCCCc
Q 027731 120 CAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENNIP-VVVFNLNQPG 191 (219)
Q Consensus 120 A~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~-------g~~~~k~~aa~~a~~~gi~-v~I~~g~~~~ 191 (219)
|.+|+||+|+|+|||||||++ ++++|+++++.|+.++ |+|.+|++++..+.++|++ ++|+|++.|+
T Consensus 205 A~~l~Ad~li~lTdVdGv~~~------~a~~i~~i~~~e~~~~~~~~~~~ggM~~Kv~aa~~a~~~gv~~v~I~~g~~~~ 278 (300)
T 2buf_A 205 AEALKAEKLMLLTNIAGLMDK------QGQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPN 278 (300)
T ss_dssp HHHHTCSEEEEEESSSCCBCT------TSCBCCEECHHHHHHHHHTTCSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTT
T ss_pred HHHcCCCEEEEEeCCCCeECC------CCcChhhCCHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCCEEEEeeCCCCc
Confidence 999999999999999999986 3689999999987654 2344488999999999998 9999999999
Q ss_pred hH-HHHhcCCCCceEEecCC
Q 027731 192 NI-AKAIQGERVGTLIGGTW 210 (219)
Q Consensus 192 ~i-~~~l~g~~~GT~i~~~~ 210 (219)
.+ .++|+++..||+|.++.
T Consensus 279 ~ll~~~~~~~~~GT~i~~~~ 298 (300)
T 2buf_A 279 AVLLEIFTDSGVGTLISNRK 298 (300)
T ss_dssp HHHHHHSSTTCCSEEEECCC
T ss_pred hHHHHHhcCCCCceEEEeCC
Confidence 88 78999988999998653
No 27
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=99.97 E-value=4.9e-32 Score=227.76 Aligned_cols=201 Identities=15% Similarity=0.177 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHCCC-eEEEEECCchHHHhHHHhccCCCCcChH-HHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccccc
Q 027731 2 AIAREVASVTRLGI-EVAIVVGGGNIFRGASAAGNSGLDRSSA-DYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSE 79 (219)
Q Consensus 2 ~la~~i~~l~~~g~-~vviV~GgG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~ 79 (219)
+++++|+++++.|+ ++|||||||++++..- +..+++.... ....+.-..++.. +..+|+++|+++..+.+.+..
T Consensus 51 ~la~~Ia~l~~~G~~~vViVhGgG~~~~~~l--~~~~~~~~~~~~~~~vt~g~l~~~-l~~~l~~~G~~a~~l~~~~~~- 126 (286)
T 3d40_A 51 RFARNFARLAETYRGRMVLISGGGAFGHGAI--RDHDSTHAFSLAGLTEATFEVKKR-WAEKLRGIGVDAFPLQLAAMC- 126 (286)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCCC--------------CCTTHHHHHHHHHHHHH-HHHHHHHTTCCEEECCGGGTE-
T ss_pred HHHHHHHHHHHcCCCeEEEEECCHHHHHHHH--HHcCCCcccchhcchhhHHHHHHH-HHHHHHHcCCcEEEEEeecCC-
Confidence 58999999999998 6999999999876432 2223332211 1111111234443 467899999998876554321
Q ss_pred c----cchHHHHHHHHHHhCCCEEEEeCC-----CCC-CccChHHHHHHHHHh-cCCceEEeeeccCccccCCCCCCCCC
Q 027731 80 V----AEPYIRRRAVRHLEKGRVVIFAAG-----TGN-PFFTTDTAAALRCAE-INAEVVLKATNVDGVYDDNPRRNPNA 148 (219)
Q Consensus 80 ~----~~~~~~~~~~~~l~~g~ipIv~g~-----~g~-~~~~sD~~Aa~lA~~-l~Ad~liiltDV~Gv~~~dP~~~~~a 148 (219)
+ ......+.+..+|+.|.|||++|+ .+. +++++|++|+++|.+ |+||+|+|+|||||||++||+ ++
T Consensus 127 ~t~dg~~~~~~~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~---~a 203 (286)
T 3d40_A 127 TLRNGIPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAG---GD 203 (286)
T ss_dssp EEETTEEEECCSHHHHHHHTTCEEEEECEEEEBTTSCEEEECGGGHHHHTTTTCCSCEEEEEEESSSSCEECC------C
T ss_pred cccCCeEEehHHHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCHHHHHHHHHHhhCCCCEEEEecCCCeeEcCCCC---CC
Confidence 1 000001245678999999999983 222 569999999999999 999999999999999999997 78
Q ss_pred cccccccHHHHhhC-------------CCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhcC-----CCC-ceEEecC
Q 027731 149 RLLDTLTYQEVTSK-------------DLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQG-----ERV-GTLIGGT 209 (219)
Q Consensus 149 ~~i~~i~~~e~~~~-------------g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~g-----~~~-GT~i~~~ 209 (219)
++|+++++.|+.++ |+|..|++|+..|.++|++++|+|+++|+.+.++|++ +++ ||.|..+
T Consensus 204 ~~i~~is~~e~~~l~~~~~~~~~~~~tggM~~Kl~Aa~~a~~~gv~v~I~~g~~p~~l~~l~t~~~~~~~~~~~t~i~~~ 283 (286)
T 3d40_A 204 TILPEVDARSPEQAYAALWGSSEWDATGAMHTKLDALVTCARRGAECFIMRGDPGSDLEFLTAPFSSWPAHVRSTRITTT 283 (286)
T ss_dssp EECCEEETTSCHHHHHHHHHSCC----CHHHHHHHHHHHHHHTTCEEEEEECCTTCCCGGGGSCGGGSCTTCCCEEEEC-
T ss_pred cCCcccCHHHHHHHHHhhccccCCcccCcHHHHHHHHHHHHHCCCcEEEEeCCCCCcHHHHhcCcccCcccccceeeeec
Confidence 99999998653221 2334488999999999999999999999999999999 776 9999764
No 28
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=99.97 E-value=9.9e-30 Score=210.83 Aligned_cols=198 Identities=19% Similarity=0.194 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHCCC-eEEEEECCchHHHh-HHHhcc-----CCCCcChHHHH----HHHHHHHHHHHHHHHHHhcCCCee
Q 027731 2 AIAREVASVTRLGI-EVAIVVGGGNIFRG-ASAAGN-----SGLDRSSADYI----GMLATVMNAIFLQATMESIGIPTR 70 (219)
Q Consensus 2 ~la~~i~~l~~~g~-~vviV~GgG~~~~~-~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~gi~a~ 70 (219)
+++++|+++++.|. ++|||||||++.+. +..++. +|++.+..+.+ +++++.+|..+++ .|+++|+++.
T Consensus 22 ~~~~~i~~l~~~g~~~vVvV~Ggg~~~~~ll~~~g~~~~~~~glr~t~~~~l~~~~~~l~~~~n~~l~~-~l~~~G~~a~ 100 (258)
T 1gs5_A 22 RLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLA-WAKKHQIAAV 100 (258)
T ss_dssp HHHHHHHHHHTTCCSCEEEEECCHHHHHHHHHHHTCCCCEETTEECBCHHHHHHHHHHHHTHHHHHHHH-HHHHTTCCEE
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCcHHHHHHHHHcCCCcceeCCEeeCCHHHHHHHHHHHhccchHHHHH-HHHHCCCCeE
Confidence 57889988887665 58999999986543 333331 34443444444 3456788988875 7799999999
Q ss_pred Eeccccccccc------------ch-HHH-HHHHHHHhCCCEEEEeCC----CCC-CccChHHHHHHHHHhcCCceEEee
Q 027731 71 VQTAFRMSEVA------------EP-YIR-RRAVRHLEKGRVVIFAAG----TGN-PFFTTDTAAALRCAEINAEVVLKA 131 (219)
Q Consensus 71 ~~~~~~~~~~~------------~~-~~~-~~~~~~l~~g~ipIv~g~----~g~-~~~~sD~~Aa~lA~~l~Ad~liil 131 (219)
++++.+...+. +. .++ +.+..+|+.|.|||++|+ .|. .++++|++|+++|.+|+|| |+||
T Consensus 101 ~l~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~i~~ll~~g~ipVi~~~g~~~~g~~~~~~~D~~Aa~lA~~l~Ad-li~l 179 (258)
T 1gs5_A 101 GLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGAD-LILL 179 (258)
T ss_dssp EECTTGGGCEEEEECCGGGBSBEEEEECCCHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHHHHHHHHHHTCE-EEEE
T ss_pred EEeecCCCEEEEEEcCCCCCCcCceeEECHHHHHHHHHCCCEEEEeCCcCCCCCcEEEecHHHHHHHHHHHhCCc-EEEE
Confidence 88776642110 00 112 345678999999999986 333 4689999999999999999 9999
Q ss_pred eccCccccCCCCCCCCCcccccccHHHHhhC-------CCCCchHHHHHHHH-hCCCcEEEEecCCCchHHHHhcCCCCc
Q 027731 132 TNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQ-ENNIPVVVFNLNQPGNIAKAIQGERVG 203 (219)
Q Consensus 132 tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~-------g~~~~k~~aa~~a~-~~gi~v~I~~g~~~~~i~~~l~g~~~G 203 (219)
|||||||++| +++|++++++|+.++ |+|..|++++..++ +.+++++|+|+++|+.+.++|+|+..|
T Consensus 180 tdV~Gv~~~d------~~~i~~i~~~e~~~l~~~~~~~gGm~~k~~~a~~~~~~~~~~v~I~~~~~~~~l~~~~~~~~~G 253 (258)
T 1gs5_A 180 SDVSGILDGK------GQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMG 253 (258)
T ss_dssp ESSSSCBCTT------SCBCCEECHHHHHHHHHTTCSCTHHHHHHHHHHHHHHHHTSCEEEEESSCGGGHHHHHTTCCSS
T ss_pred eCCCceECCC------CCCCcccCHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhCCCEEEEecCCCchHHHHHhcCCCCc
Confidence 9999999975 589999999987764 23445778877665 468899999999999999999999999
Q ss_pred eEEe
Q 027731 204 TLIG 207 (219)
Q Consensus 204 T~i~ 207 (219)
|+|.
T Consensus 254 T~i~ 257 (258)
T 1gs5_A 254 TRIL 257 (258)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9996
No 29
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=99.97 E-value=1.1e-29 Score=215.78 Aligned_cols=200 Identities=15% Similarity=0.160 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHh-HHHhcc---CCCCcChHHHHHH-----HHHHHHHHHHHHHHHhcCCCe---
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRG-ASAAGN---SGLDRSSADYIGM-----LATVMNAIFLQATMESIGIPT--- 69 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~-~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~gi~a--- 69 (219)
+++++|+.+++.|+++|||||||++.+. +..++. +..+..+.+...+ +...++.. +...|.+.|++.
T Consensus 30 ~~a~~I~~l~~~G~~vVlVhGgg~~~~~~l~~~~~~~~~~~~~~~l~~~~a~~~G~l~~~i~~a-l~~~l~~~g~~~~v~ 108 (310)
T 2we5_A 30 QTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAMTQGSIGYWLSNA-LNQELNKAGIKKQVA 108 (310)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHTCSSSSCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHCCCeEEEEECCcHHHhHHHHHcCCCCCCCCCHHHHHHHHHHhhhHHHHHHHHH-HHHHHHhcCCchhhH
Confidence 5899999999999999999999987654 333331 1123445555543 22223322 356687788763
Q ss_pred ---------------------eEe--ccccc-----ccc------cchH------------HHHH-HHHHHhCCCEEEEe
Q 027731 70 ---------------------RVQ--TAFRM-----SEV------AEPY------------IRRR-AVRHLEKGRVVIFA 102 (219)
Q Consensus 70 ---------------------~~~--~~~~~-----~~~------~~~~------------~~~~-~~~~l~~g~ipIv~ 102 (219)
+++ +..+. ..+ ...| ++.+ +..+|+.|.|||++
T Consensus 109 ~~l~~~~v~~~d~~f~~~~~~vg~~~t~~da~~l~~~~~~~~~~~~~~~~~vv~sp~~i~~v~~~~i~~lL~~g~IpIi~ 188 (310)
T 2we5_A 109 TVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISC 188 (310)
T ss_dssp EBCCEEEECTTCHHHHSCCEEEEEEECHHHHHHHHTTTCCEEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEECC
T ss_pred hhhhhhcccccchhhcccCceeEEeccHHHHHHHHhccccccccCCcceeeccCCcccceeehHHHHHHHHHCCCEEEEE
Confidence 111 11110 001 0001 2333 45789999999999
Q ss_pred CCCC-----------CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC--------C
Q 027731 103 AGTG-----------NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK--------D 163 (219)
Q Consensus 103 g~~g-----------~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~--------g 163 (219)
|+.| ..++|+|++|+.+|.+|+||+|+|+|||||||+ || .+|++++|+++++.|+.++ |
T Consensus 189 Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp-~~~~a~~i~~i~~~e~~~~~~~g~~~~G 266 (310)
T 2we5_A 189 GGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCI-NY-GKPDEKQLTNVTVAELEEYKQAGHFAPG 266 (310)
T ss_dssp GGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSCSSCEE-ST-TSTTCEECCEEEHHHHHHHHHTTCSCTT
T ss_pred CCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCchHhhC-CC-CCCCCeECCEEcHHHHHHHhhCCCCCCC
Confidence 5422 245899999999999999999999999999999 78 5889999999999987754 4
Q ss_pred CCCchHHHHHHHHhCCC--cEEEEecCCCchHHHHhcCCCCceEEe
Q 027731 164 LSVMDMTAITLCQENNI--PVVVFNLNQPGNIAKAIQGERVGTLIG 207 (219)
Q Consensus 164 ~~~~k~~aa~~a~~~gi--~v~I~~g~~~~~i~~~l~g~~~GT~i~ 207 (219)
+|..|++||..+.++|+ +++|++ ++.+.++|+|+..||+|.
T Consensus 267 gM~~Kv~aa~~a~~~gv~~~v~I~~---~~~l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 267 SMLPKIEAAIQFVESQPNKQAIITS---LENLGSMSGDEIVGTVVT 309 (310)
T ss_dssp TTHHHHHHHHHHHHHSTTCEEEEEC---SGGGGGCBTTBCCSEEEE
T ss_pred ChHHHHHHHHHHHHcCCCceEEECc---HHHHHHHHcCCCCCeEEe
Confidence 56679999999999999 799996 566888999988999996
No 30
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=99.97 E-value=3.7e-29 Score=212.96 Aligned_cols=200 Identities=18% Similarity=0.171 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHh-HHHhcc-CC-CCcChHHHHHHHH-----HHHHHHHHHHHHHhcCCCe----
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRG-ASAAGN-SG-LDRSSADYIGMLA-----TVMNAIFLQATMESIGIPT---- 69 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~-~~~~~~-~~-~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~gi~a---- 69 (219)
+++++|+.|++.|+++|||||||++.+. +..++. .. .+..+.+.+++.+ ..++. .+...|.++|+++
T Consensus 34 ~~a~~I~~l~~~G~~vVlVhGgg~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~G~i~~~l~~-~l~~~l~~~g~~a~~~~ 112 (316)
T 2e9y_A 34 RASSIIADVLADGWRSVITHGNGPQVGYLSEAFEALPPERPRQPLYIATAMTQAWIGLLLKH-SLEEELRRRGLNVLVPV 112 (316)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHTSCTTSCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCCCCCCE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCcHHHhHHHHHcCCCCCCCCHHHHHHHHHHHHhHHHHHHHH-HHHHHHHhcCCCccccc
Confidence 5899999999999999999999986653 334431 11 1234566655422 23454 4567888999986
Q ss_pred ----eEecccccc---------cc------------------cc-----------h----HHHHH-HHHHHhCCCEEEEe
Q 027731 70 ----RVQTAFRMS---------EV------------------AE-----------P----YIRRR-AVRHLEKGRVVIFA 102 (219)
Q Consensus 70 ----~~~~~~~~~---------~~------------------~~-----------~----~~~~~-~~~~l~~g~ipIv~ 102 (219)
+.+++.+.. .+ .+ + .++.+ +..+|+.|.|||++
T Consensus 113 v~~qv~l~~~d~~f~~~~k~~g~~~~~~~a~~~~~~~g~~~~~~~g~g~r~vv~sp~~i~~v~~~~i~~lL~~g~IpI~~ 192 (316)
T 2e9y_A 113 VISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGWVFKRDPRGGFRRVVPSPRPVSIVDRDLIAEASAESPAVVAL 192 (316)
T ss_dssp ECCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSSEEEEECCCCEEEETTHHHHHHHHHHCSEEEEC
T ss_pred eeeEEEeccccccccccccccccccchhhhhhhhhhcceeeeccccccceecccCCCcceeehHHHHHHHHHCCCEEEEE
Confidence 334333310 00 00 0 02333 45689999999998
Q ss_pred CCCCC--------------CccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC------
Q 027731 103 AGTGN--------------PFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK------ 162 (219)
Q Consensus 103 g~~g~--------------~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~------ 162 (219)
|+.|. .++|+|++|+.+|.+|+||+|+|+|||||||+ ||+ +|++++|++++++|+.++
T Consensus 193 g~~g~pv~~~~~g~~~g~~~~id~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp~-~p~a~~i~~i~~~e~~~~~~~g~~ 270 (316)
T 2e9y_A 193 GGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADLLVILTDVPGVAV-NYG-REGERWLRRAAASELKKYLREGHF 270 (316)
T ss_dssp GGGCEEEEECTTSCEEECSCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEE-TTT-STTCEECSEEEHHHHHHHHHTTCS
T ss_pred CCCCCCeeECCCCCeecceeeeCHHHHHHHHHHHcCCCEEEEEeCchHhhC-CCC-CCCCcCCcEEcHHHHHHHHhcCCC
Confidence 54221 23599999999999999999999999999999 784 789999999999987654
Q ss_pred --CCCCchHHHHHHHHhCCC-cEEEEecCCCchHHHHhcCCCCceEEec
Q 027731 163 --DLSVMDMTAITLCQENNI-PVVVFNLNQPGNIAKAIQGERVGTLIGG 208 (219)
Q Consensus 163 --g~~~~k~~aa~~a~~~gi-~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 208 (219)
|+|..|+++|..+.++|+ +++|+| ++.+.++|+| ..||+|.+
T Consensus 271 ~~GgM~~Kv~aa~~a~~~gv~~v~I~~---~~~l~~~l~g-~~GT~i~~ 315 (316)
T 2e9y_A 271 PPGSMGPKVEAAISFVERTGKPAVIGS---LEEARQVLSL-QAGTVVML 315 (316)
T ss_dssp CTTTHHHHHHHHHHHHHHHCSCEEEEE---STTHHHHHTT-SSSEEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEECc---HHHHHHHHcC-CCCeEEec
Confidence 345669999999999999 799987 5668899998 78999974
No 31
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=99.96 E-value=5e-28 Score=205.73 Aligned_cols=200 Identities=18% Similarity=0.246 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHH-hHHHhcc---C-CCCcChHHHHHHH-----HHHHHHHHHHHHHHhcCCCe--
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFR-GASAAGN---S-GLDRSSADYIGML-----ATVMNAIFLQATMESIGIPT-- 69 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~-~~~~~~~---~-~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~gi~a-- 69 (219)
+++++|+.+++.|+++|||||||+... .+..++. + ..+..+.+...+. ...++ .++...|.++|+++
T Consensus 32 ~~a~~I~~l~~~G~~vVlVhGgg~~i~~~l~~~~~~~~~~~~~~~~l~~~~a~~~G~i~~~l~-~~l~~~l~~~gi~a~~ 110 (314)
T 1e19_A 32 KTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQ-QALKNELRKRGMEKKV 110 (314)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHHCCCeEEEEeCChHHHhHHHHhccCccccCCCChhHHHHHHHHHhhHHHHHHH-HHHHHHHHHcCCchhh
Confidence 589999999999999999999987543 2222221 0 1344455554332 22343 33467889999986
Q ss_pred ------eEecccccc---------c-cc-----------------c---h------------HHHHH-HHHHHhCCCEEE
Q 027731 70 ------RVQTAFRMS---------E-VA-----------------E---P------------YIRRR-AVRHLEKGRVVI 100 (219)
Q Consensus 70 ------~~~~~~~~~---------~-~~-----------------~---~------------~~~~~-~~~~l~~g~ipI 100 (219)
+.+++.+.. . +. + . .++.+ +..+|+.|.|||
T Consensus 111 ~~~~~qv~l~~~d~~f~~~~k~~g~~~t~~~a~~~~~~~g~~~~g~~~~~~~~~v~s~~~i~~v~~~~i~~lL~~g~IpV 190 (314)
T 1e19_A 111 VTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVI 190 (314)
T ss_dssp EEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCEEE
T ss_pred hhhheeeeecccchhhccccccccceecHHHhhhhhhhcCccccccccccccccccCcccceeehHHHHHHHHHCCCEEE
Confidence 233333210 0 00 0 0 01233 457899999988
Q ss_pred EeCC---------C---C-CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC-----
Q 027731 101 FAAG---------T---G-NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK----- 162 (219)
Q Consensus 101 v~g~---------~---g-~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~----- 162 (219)
++|+ + + ..++|+|++|+++|.+|+||+|+|+|||||||++|| +|++++|++++++|+.++
T Consensus 191 ~~Gg~giPi~~~~d~~~g~~~~~d~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~~p--~~~a~~i~~i~~~e~~~~~~~g~ 268 (314)
T 1e19_A 191 ASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYG--TEKEQWLREVKVEELRKYYEEGH 268 (314)
T ss_dssp CSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTT--STTCEECCEEEHHHHHHHHHTTC
T ss_pred EeCCCccCeEECCCCcceeEEeccHHHHHHHHHHHcCCCEEEEeccCCEEECCCC--CCCCeECCEECHHHHHHHHhCCC
Confidence 8742 2 1 135899999999999999999999999999999998 588999999999987764
Q ss_pred ---CCCCchHHHHHH-HHhCCCcEEEEecCCCchHHHHhcCCCCceEEec
Q 027731 163 ---DLSVMDMTAITL-CQENNIPVVVFNLNQPGNIAKAIQGERVGTLIGG 208 (219)
Q Consensus 163 ---g~~~~k~~aa~~-a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~ 208 (219)
|+|..|+++|.. +.+.+++++|+|. +.+.++|+| +.||+|.+
T Consensus 269 ~~~GgM~~Kv~aa~~~~~~~~~~v~I~~~---~~l~~~~~g-~~GT~i~~ 314 (314)
T 1e19_A 269 FKAGSMGPKVLAAIRFIEWGGERAIIAHL---EKAVEALEG-KTGTQVLP 314 (314)
T ss_dssp SCTTTHHHHHHHHHHHHHHTCSEEEEEEG---GGHHHHHTT-SSSEEEEC
T ss_pred cCCCChHHHHHHHHHHHHhCCCeEEEecH---HHHHHHHcC-CCCeEEcC
Confidence 345568899866 5556778999985 468899988 48999974
No 32
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=99.96 E-value=7.1e-28 Score=201.08 Aligned_cols=187 Identities=21% Similarity=0.287 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHCCCeEEEEECCch-HHHhHHHhcc-----CCCCcC---hHHHHHH-HHHHHHHHHHHHHHHhcCCCeeE
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGN-IFRGASAAGN-----SGLDRS---SADYIGM-LATVMNAIFLQATMESIGIPTRV 71 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~-~~~~~~~~~~-----~~~~~~---~~~~~~~-~~~~~~~~l~~~~l~~~gi~a~~ 71 (219)
+++++|+.|++.|+++|||||||+ +..++..++. .|++.+ +.+.+++ ++..+|..+ .+.|+++|+++..
T Consensus 54 ~l~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~lg~~~~~~~G~Rvtd~~~l~~v~~~l~G~ln~~i-~~~L~~~G~~a~~ 132 (279)
T 3l86_A 54 DFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDLVGKNL-QEKLRQAGVSCQQ 132 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHTTHHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHHHHhCCCcEEEEECCHHHHHHHHHHcCCCCccCCCcccCcHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCEEE
Confidence 589999999999999999999886 5566666652 222222 2333444 344566665 5799999999998
Q ss_pred eccccccccc----c--hH--------HH-HHHHHHHhCCCEEEEeCC----CCCCc-cChHHHHHHHHHhcCCceEEee
Q 027731 72 QTAFRMSEVA----E--PY--------IR-RRAVRHLEKGRVVIFAAG----TGNPF-FTTDTAAALRCAEINAEVVLKA 131 (219)
Q Consensus 72 ~~~~~~~~~~----~--~~--------~~-~~~~~~l~~g~ipIv~g~----~g~~~-~~sD~~Aa~lA~~l~Ad~liil 131 (219)
+++.+...+. + .| ++ +.+..+|+.|.|||++|. .|..+ +++|++|+++|.+|+||+|+|+
T Consensus 133 l~g~dg~llta~~~~~~d~g~vG~i~~v~~~~i~~lL~~g~IPVi~~v~~~~~G~~~~i~~D~~Aa~lA~~L~Ad~Liil 212 (279)
T 3l86_A 133 LKSDIKHVVAADYLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVAVALAADKLILM 212 (279)
T ss_dssp CSGGGGGTEEEEESCHHHHBSBEEEEEECHHHHHHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHHHHTTCSEEEEE
T ss_pred EecCcCCEEEeeccCccccCcccccchhhHHHHHHHHhCCcEEEECCcEECCCCCEeecCHHHHHHHHHHHcCCCEEEEE
Confidence 7766543221 1 11 23 335578999999999982 33334 6999999999999999999999
Q ss_pred eccCccccCCCCCCCCCcccccccHHHHhhC-------CCCCchHHHHHHHHhCCCc-EEEEecCCCchHHHHhcCCCCc
Q 027731 132 TNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-------DLSVMDMTAITLCQENNIP-VVVFNLNQPGNIAKAIQGERVG 203 (219)
Q Consensus 132 tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~-------g~~~~k~~aa~~a~~~gi~-v~I~~g~~~~~i~~~l~g~~~G 203 (219)
|||||||+ ++++|++++++|+.++ |+|.+|++|+..|.+.|++ ++|+|++.. |
T Consensus 213 TDVdGV~~-------d~~~I~~i~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~~Gv~~v~I~~~~~~------------G 273 (279)
T 3l86_A 213 TNVKGVLE-------NGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAGVGQVLIGDNLLT------------G 273 (279)
T ss_dssp CSSSSCEE-------TTEECCEEEGGGSHHHHHTTSSCTTHHHHHHHHHHHHHTTCSEEEEESSSSC------------S
T ss_pred eCCCcccc-------CCEehhhccHHHHHHHHhCCCCcCcHHHHHHHHHHHHHcCCCEEEEeccCCC------------C
Confidence 99999995 3689999999876653 4556699999999999998 999998742 9
Q ss_pred eEEec
Q 027731 204 TLIGG 208 (219)
Q Consensus 204 T~i~~ 208 (219)
|+|..
T Consensus 274 T~i~~ 278 (279)
T 3l86_A 274 TLITA 278 (279)
T ss_dssp EEEEC
T ss_pred eEEec
Confidence 99975
No 33
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=99.96 E-value=6.1e-28 Score=203.74 Aligned_cols=200 Identities=14% Similarity=0.200 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHh-HHHhcc-----CCCCcC---hHHHHHHHHHHHHHHHHHHHHHhcCCCeeEe
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRG-ASAAGN-----SGLDRS---SADYIGMLATVMNAIFLQATMESIGIPTRVQ 72 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~-~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~ 72 (219)
+++++|+.+++.|.++|||||||++.+. +.+++. .|++.+ +.+.+.++...+|..++ +.|.+.|++++++
T Consensus 66 ~~~~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~~~~G~RvTd~~~l~vv~m~~~~vn~~lv-~~L~~~G~~Av~l 144 (307)
T 3zzh_A 66 ELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLV-TALEQLGVRARPI 144 (307)
T ss_dssp HHHHHHHHHHHBTCCEEEEECCHHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHHHHHHH-HHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHHHHHHHHH-HHHHhCCCCeeEE
Confidence 6899999999999999999999997654 344432 244333 34555565567888775 6899999999988
Q ss_pred ccccc--c-----ccc---c-hHHH-HHHHHHHhCCCEEEEeCC----CC-CCccChHHHHHHHHHhcCCceEEeeeccC
Q 027731 73 TAFRM--S-----EVA---E-PYIR-RRAVRHLEKGRVVIFAAG----TG-NPFFTTDTAAALRCAEINAEVVLKATNVD 135 (219)
Q Consensus 73 ~~~~~--~-----~~~---~-~~~~-~~~~~~l~~g~ipIv~g~----~g-~~~~~sD~~Aa~lA~~l~Ad~liiltDV~ 135 (219)
++-.. . ++. + ..++ +.+..+|+.|.|||++|+ .| ..++++|++|+++|.+|+||+|+|+||||
T Consensus 145 ~gg~~~a~~~~~~d~g~~G~i~~v~~~~i~~lL~~g~IpVi~~~g~~~~G~~~~i~~D~~A~~lA~~L~Ad~Li~lTdV~ 224 (307)
T 3zzh_A 145 TSGVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKG 224 (307)
T ss_dssp CSSSEEEEESCHHHHBSBEEEEEECCHHHHHHHHHTCEEEECCCEECTTCBEEBCCHHHHHHHHHHHHCCSEEEEECSSC
T ss_pred cCCcEEEEecCccccCccccccccCHHHHHHHHHCCCEEEEeCCeECCCCcEEecCHHHHHHHHHHhCCCCEEEEEeCCc
Confidence 75110 0 000 0 0123 345678999999999985 23 24589999999999999999999999999
Q ss_pred ccccCCCCCCCCCcccccccHHH-HhhC-------CCCCchHHHHHHHHhC---CCcEEEEecCCCchH-HHHhcCCCCc
Q 027731 136 GVYDDNPRRNPNARLLDTLTYQE-VTSK-------DLSVMDMTAITLCQEN---NIPVVVFNLNQPGNI-AKAIQGERVG 203 (219)
Q Consensus 136 Gv~~~dP~~~~~a~~i~~i~~~e-~~~~-------g~~~~k~~aa~~a~~~---gi~v~I~~g~~~~~i-~~~l~g~~~G 203 (219)
|||++ |++++|+++++.| +.++ |+|..|+++++.|.+. +.+++|++ ++.+ .++++++++|
T Consensus 225 GV~~~-----~~~~~i~~i~~~e~~~~l~~~~~~tGGM~~Kl~aa~~a~~~v~~g~~v~I~~---~~~ll~elft~~g~G 296 (307)
T 3zzh_A 225 GIING-----STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIIN---VQDLQKELFTDSGAG 296 (307)
T ss_dssp SCEET-----TTTEECCEEEHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHSCTTCCEEEEC---GGGHHHHHHSCCCCS
T ss_pred ceecC-----CCCcCCcccCHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHhccCeEEEEeC---ccHHHHHHhcCCCCc
Confidence 99986 4689999999865 3332 3456688876666554 78899998 6776 5788999999
Q ss_pred eEEecCC
Q 027731 204 TLIGGTW 210 (219)
Q Consensus 204 T~i~~~~ 210 (219)
|+|.+..
T Consensus 297 T~I~~~~ 303 (307)
T 3zzh_A 297 TMIRRGY 303 (307)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9998753
No 34
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=99.95 E-value=6.8e-28 Score=214.59 Aligned_cols=201 Identities=19% Similarity=0.225 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHH-hHHHhcc-----CCCCc---ChHHHHHHHHHHHHHHHHHHHHHhcCCCe---
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFR-GASAAGN-----SGLDR---SSADYIGMLATVMNAIFLQATMESIGIPT--- 69 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~-~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~l~~~~l~~~gi~a--- 69 (219)
+++++|+.+++.|+++|||||||++.+ .+..++. .|++. .+.+.+++.+..++..+ .+.|+ +|+++
T Consensus 62 ~~~~~i~~l~~~g~~vvlVhggg~~~~~~~~~~~~~~~~~~g~r~t~~~~l~~~~~~~G~~~~~l-~~~l~-~g~~~~~~ 139 (456)
T 3d2m_A 62 KLAADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTVRSRF-EAALC-GSVSGFAR 139 (456)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCHHHHHTTTTTTTCCCCCGGGCCCBCHHHHHHHHHHHHHHHHHH-HHHHH-TC------
T ss_pred HHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHCCCCCEeeCCeecCCHHHHHHHHHHHhHHHHHH-HHHHh-cccccCCC
Confidence 589999999999999999999988643 3333331 12222 23444445445666665 45787 88887
Q ss_pred -eEecccccc-------------ccc---c-hHHH-HHHHHHHhCCCEEEEeCC----CC-CCccChHHHHHHHHHhcCC
Q 027731 70 -RVQTAFRMS-------------EVA---E-PYIR-RRAVRHLEKGRVVIFAAG----TG-NPFFTTDTAAALRCAEINA 125 (219)
Q Consensus 70 -~~~~~~~~~-------------~~~---~-~~~~-~~~~~~l~~g~ipIv~g~----~g-~~~~~sD~~Aa~lA~~l~A 125 (219)
+.+++.+.. |+. . .+++ +.+..+|+.|.|||++++ .| ..++|+|++|+.+|.+|+|
T Consensus 140 ~~~l~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~ipIi~~~~~~~~g~~~~~~~D~~Aa~lA~~l~A 219 (456)
T 3d2m_A 140 APSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQA 219 (456)
T ss_dssp --CCCEECCSCEEEEECCEETTEECBTBEEEEEECHHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHHHHHHHHHHTC
T ss_pred ccceeeccCcEEEEEEcccccCcccCceeeEEEECHHHHHHHHHCCCeEEECCcccCCCCCEEEECHHHHHHHHHHHcCC
Confidence 444433321 111 0 1233 335579999999999974 23 3458999999999999999
Q ss_pred ceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC-----CCCCchHHHHHHHHhCCCc-EEEEecCCCchH-HHHhc
Q 027731 126 EVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK-----DLSVMDMTAITLCQENNIP-VVVFNLNQPGNI-AKAIQ 198 (219)
Q Consensus 126 d~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~-----g~~~~k~~aa~~a~~~gi~-v~I~~g~~~~~i-~~~l~ 198 (219)
|+|+|+|||||||++ ++++|+++++.|+.++ |+|.+|++||..|.+.|++ ++|+|++.|+.+ .++++
T Consensus 220 d~li~lTdvdGv~~~------~~~~i~~i~~~e~~~~~~~g~ggm~~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~~ 293 (456)
T 3d2m_A 220 EKLVYLTLSDGISRP------DGTLAETLSAQEAQSLAEHAASETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFT 293 (456)
T ss_dssp SEEEEEESSSSCBCT------TSCBCSEEEHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHC
T ss_pred CEEEEEECCccccCC------CCCccccCCHHHHHHHHhccCCChHHHHHHHHHHHHhCCCEEEEecCcCCchHHHHHHh
Confidence 999999999999986 4789999999887764 4456699999999999996 999999999998 67888
Q ss_pred CCCCceEEecCC
Q 027731 199 GERVGTLIGGTW 210 (219)
Q Consensus 199 g~~~GT~i~~~~ 210 (219)
++..||+|.++.
T Consensus 294 ~~~~GT~i~~~~ 305 (456)
T 3d2m_A 294 RNGIGTSIAKEA 305 (456)
T ss_dssp SSCSSEEEECCC
T ss_pred hcCCceeeeccc
Confidence 888999998754
No 35
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=99.95 E-value=3.1e-27 Score=211.01 Aligned_cols=159 Identities=25% Similarity=0.310 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeEeccccccccc-------ch--HHH-HHHHHHHhCCCEEEEeCCC-----C-
Q 027731 43 ADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA-------EP--YIR-RRAVRHLEKGRVVIFAAGT-----G- 106 (219)
Q Consensus 43 ~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~-------~~--~~~-~~~~~~l~~g~ipIv~g~~-----g- 106 (219)
.+.+.+.++.+|+.+++.+|++.|+++.++++.+.+.+. ++ ..+ +.+..+|+.|.|||++|+. |
T Consensus 122 ~d~~~~~ge~~s~~l~~~~L~~~G~~a~~l~~~~~~i~t~~~~~~~~~~~~~~~~~i~~ll~~g~ipVv~G~~g~~~~g~ 201 (473)
T 3c1m_A 122 RDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITDNNFGSARVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGY 201 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCEEEECHHHHTEEECSCTTSCCEEEECHHHHHHHHHHTTCEEEEESSEEEETTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEchheeEEEccCCCCccccHhhhHHHHHHHHhCCcEEEEeCCcccCCCCC
Confidence 456666788999999999999999999998877652111 11 112 3455788999999999852 2
Q ss_pred ---CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhh---CCCCCchHHHHHHHHhCCC
Q 027731 107 ---NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTS---KDLSVMDMTAITLCQENNI 180 (219)
Q Consensus 107 ---~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~---~g~~~~k~~aa~~a~~~gi 180 (219)
..++++|++|+.+|.+|+||+|++||||||||++||+.+|++++++++++.|+.+ .|.++|+++++.+|.++|+
T Consensus 202 ~~~l~rg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dP~~~~~a~~i~~is~~e~~~l~~~g~~~m~~~a~~~a~~~gi 281 (473)
T 3c1m_A 202 ITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGAKVLHPRTIEPAMEKGI 281 (473)
T ss_dssp EEECCTTTHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHHHHTTCTTSCGGGHHHHHHHTC
T ss_pred EEEeCCCChHHHHHHHHHHcCCCEEEEeeCCCcceeCCCCCCCCCeEecccCHHHHHHHHhcCCcchHHHHHHHHHHcCC
Confidence 2457999999999999999999999999999999999999999999999998876 4888999999999999999
Q ss_pred cEEEEecCCCchHHHHhcCCCCceEEecCC
Q 027731 181 PVVVFNLNQPGNIAKAIQGERVGTLIGGTW 210 (219)
Q Consensus 181 ~v~I~~g~~~~~i~~~l~g~~~GT~i~~~~ 210 (219)
|++|+|+++|+ ..||+|.++.
T Consensus 282 ~v~I~~~~~~~---------~~GT~i~~~~ 302 (473)
T 3c1m_A 282 PILVKNTFEPE---------SEGTLITNDM 302 (473)
T ss_dssp CEEEEETTSTT---------SCCEEEESCC
T ss_pred EEEEEecCCCC---------CceEEEeccc
Confidence 99999999886 5799998754
No 36
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=99.95 E-value=6.2e-27 Score=210.03 Aligned_cols=159 Identities=23% Similarity=0.297 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccccc-----cc------hH--HHHHHHH-HHhCCCEEEEeCCC---
Q 027731 43 ADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV-----AE------PY--IRRRAVR-HLEKGRVVIFAAGT--- 105 (219)
Q Consensus 43 ~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~-----~~------~~--~~~~~~~-~l~~g~ipIv~g~~--- 105 (219)
.+.+.+.++.+++.+++.+|+++|+++.++++.+.+.+ .+ .+ .+..+.+ +++.|.|||++||.
T Consensus 140 ~d~l~s~GE~~s~~ll~~~L~~~Gi~A~~l~~~~~~l~t~~~~~~~~i~~~~~~~~~~~l~~~Ll~~g~IpVv~Gf~g~~ 219 (510)
T 2cdq_A 140 RDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKG 219 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCEEEECGGGTTCEECSCSTTCCBCTTHHHHHHHHHHHHHHHSCCEEEEESSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEhhHeeEEEecCCCccchhhHHHHHHHHHHHHHHHhCCcEEEEeCccccC
Confidence 45556677889999999999999999999888765211 11 11 2234444 67899999998852
Q ss_pred ---C----CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC---CCCCchHHHHHHH
Q 027731 106 ---G----NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITLC 175 (219)
Q Consensus 106 ---g----~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~---g~~~~k~~aa~~a 175 (219)
| ..+++||++|+.+|.+|+||++++||||||||++||+.+|++++|++++|+|+.++ |.++||++|+.+|
T Consensus 220 ~~~g~ittlgrGgsD~tAa~lA~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is~~E~~ela~~Ga~vmh~~a~~~a 299 (510)
T 2cdq_A 220 WKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGAQVLHPQSMRPA 299 (510)
T ss_dssp TTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHHHHSSCCCHHHHHHH
T ss_pred CCCCceEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEeCHHHHHHHHhcCcchhHHHHHHHH
Confidence 2 13567999999999999999999999999999999999999999999999998775 8899999999999
Q ss_pred HhCCCcEEEEecCCCchHHHHhcCCCCceEEecCC
Q 027731 176 QENNIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 210 (219)
Q Consensus 176 ~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~~~ 210 (219)
.++|||++|.|+++|+ ..||+|.++.
T Consensus 300 ~~~gIpv~I~n~~~p~---------~~GT~I~~~~ 325 (510)
T 2cdq_A 300 REGEIPVRVKNSYNPK---------APGTIITKTR 325 (510)
T ss_dssp HHHTCCEEEEETTSTT---------SCCEEEESCC
T ss_pred HHCCCeEEEEccCcCC---------CCCeEEeccc
Confidence 9999999999999986 5799998753
No 37
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=99.94 E-value=4e-26 Score=201.83 Aligned_cols=199 Identities=14% Similarity=0.193 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHh-HHHhcc-----CCCCcCh---HHHHHHHHHHHHHHHHHHHHHhcCCCeeEe
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRG-ASAAGN-----SGLDRSS---ADYIGMLATVMNAIFLQATMESIGIPTRVQ 72 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~-~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~ 72 (219)
+++++|+.|+..|.++|||||||++.+. +..++. .|++.+. .+.+.++...+|..++ +.|.++|++++++
T Consensus 66 ~la~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~RvTd~~tl~vv~mv~~~vn~~lv-~~L~~~G~~Avgl 144 (464)
T 4ab7_A 66 ELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLV-TALEQLGVRARPI 144 (464)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCHHHHHHHHHTTCCCCEETTEECBCHHHHHHHHHHHHHHHHHHH-HHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHcCCCccccCCeecCCHHHHHHHHHHHHHHHHHHH-HHHHhCCCCeEEE
Confidence 6899999999999999999999996654 344442 3444333 4556666667887765 6899999999988
Q ss_pred cccc--cc-----ccc---c-hHHH-HHHHHHHhCCCEEEEeCC----CCC-CccChHHHHHHHHHhcCCceEEeeeccC
Q 027731 73 TAFR--MS-----EVA---E-PYIR-RRAVRHLEKGRVVIFAAG----TGN-PFFTTDTAAALRCAEINAEVVLKATNVD 135 (219)
Q Consensus 73 ~~~~--~~-----~~~---~-~~~~-~~~~~~l~~g~ipIv~g~----~g~-~~~~sD~~Aa~lA~~l~Ad~liiltDV~ 135 (219)
++-- .. ++. + ..++ +.+..+|+.|.|||++|+ .|. .++++|++|+.+|.+|+||+|+|+||||
T Consensus 145 sgg~~~a~~~~~~d~g~vG~I~~v~~~~I~~lL~~G~IPVi~~~g~~~~G~~~ni~~D~~Aa~lA~~L~Ad~Li~lTdV~ 224 (464)
T 4ab7_A 145 TSGVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKG 224 (464)
T ss_dssp CSSSEEEEESCTTTTBSBEEEEEECCHHHHHHHHTTCEEEEESEEECTTCBEEECCHHHHHHHHHHHHCCSEEEEEESSC
T ss_pred CCCcEEEEecCccccCCcCcccccCHHHHHHHHHCCcEEEEcCCcCCCCCCEEEecHHHHHHHHHHHcCCCEEEEEeccc
Confidence 7511 00 111 0 0123 345679999999999984 333 4589999999999999999999999999
Q ss_pred ccccCCCCCCCCCcccccccHHH-HhhC-------CCCCchHHHHHHHHhC---CCcEEEEecCCCchH-HHHhcCCCCc
Q 027731 136 GVYDDNPRRNPNARLLDTLTYQE-VTSK-------DLSVMDMTAITLCQEN---NIPVVVFNLNQPGNI-AKAIQGERVG 203 (219)
Q Consensus 136 Gv~~~dP~~~~~a~~i~~i~~~e-~~~~-------g~~~~k~~aa~~a~~~---gi~v~I~~g~~~~~i-~~~l~g~~~G 203 (219)
|||++ |++++|++++..| +.++ |+|.+|+++++.|.+. +.+++|++ ++.+ .++++++++|
T Consensus 225 GV~~~-----~~~~lI~~it~~e~~~~li~~~~~tgGM~pKl~aa~aa~~~v~~g~~v~I~~---~~~ll~eLft~~g~G 296 (464)
T 4ab7_A 225 GIING-----STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIIN---VQDLQKELFTDSGAG 296 (464)
T ss_dssp SEECT-----TTCCEECEEEHHHHHHHHHTCSSCCHHHHHHHHHHHHHHTTSCTTCEEEEEE---STTHHHHTTSSSTTS
T ss_pred ccccC-----CCCcCCcccCHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcccCcEEEEec---ChHHHHHHhcCCCCc
Confidence 99986 3679999999865 3322 3456688877777664 77899998 5555 5788899999
Q ss_pred eEEecC
Q 027731 204 TLIGGT 209 (219)
Q Consensus 204 T~i~~~ 209 (219)
|+|.++
T Consensus 297 T~I~~~ 302 (464)
T 4ab7_A 297 TMIRRG 302 (464)
T ss_dssp EEEECC
T ss_pred eEEecC
Confidence 999976
No 38
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=99.94 E-value=4.3e-26 Score=202.13 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccc----ccc--chH---HH---HHHHHHHhCCCEEEEeCCCC----
Q 027731 43 ADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMS----EVA--EPY---IR---RRAVRHLEKGRVVIFAAGTG---- 106 (219)
Q Consensus 43 ~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~----~~~--~~~---~~---~~~~~~l~~g~ipIv~g~~g---- 106 (219)
.+.+.+.++.++..+++.+|+++|+++.++++.+.. ++. +++ .. .++++.|..+.|||++|+.+
T Consensus 111 ~d~l~s~Ge~~s~~l~~~~L~~~Gi~a~~l~~~~~l~t~~~~~~~~~~~~~~~~~~~~~l~~l~~~~IpVv~Gf~g~~~~ 190 (449)
T 2j0w_A 111 TDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDIAALAELAALQLLPRLNEGLVITQGFIGSENK 190 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCEEECCGGGTCBBCSCTTSCCBCHHHHHHHHHHHTHHHHHHSEEEEESSEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCcEEEEchHHheeecCCCCCccccHhHhHHHHHHHHHHHhcCCEEEEeCCeeeCCC
Confidence 355556678899999999999999999988877651 111 111 11 12333233445999998622
Q ss_pred -----CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC---CCCCchHHHHHHHHhC
Q 027731 107 -----NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITLCQEN 178 (219)
Q Consensus 107 -----~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~---g~~~~k~~aa~~a~~~ 178 (219)
..+++||++|+.+|.+|+||+|++||||||||++||+.+|++++|++++++|+.++ |.+++|++|+.+|.++
T Consensus 191 g~~ttl~rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~~G~kvlh~~a~~~a~~~ 270 (449)
T 2j0w_A 191 GRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRS 270 (449)
T ss_dssp SCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHHTTCTTSCTTTHHHHHHH
T ss_pred CCEEEeCCCChHHHHHHHHHHCCCCEEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHhcCCccchHHHHHHHHHC
Confidence 23577999999999999999999999999999999999999999999999998775 7788899999999999
Q ss_pred CCcEEEEecCCCchHHHHhcCCCCceEEecCC
Q 027731 179 NIPVVVFNLNQPGNIAKAIQGERVGTLIGGTW 210 (219)
Q Consensus 179 gi~v~I~~g~~~~~i~~~l~g~~~GT~i~~~~ 210 (219)
|+|++|.|+++|+ ..||+|.++.
T Consensus 271 gi~v~I~~~~~p~---------~~GT~I~~~~ 293 (449)
T 2j0w_A 271 DIPVFVGSSKDPR---------AGGTLVCNKT 293 (449)
T ss_dssp TCCEEEEESSCTT---------SCCEEEESCC
T ss_pred CCeEEEEECCCCC---------CCeeEEeccc
Confidence 9999999999886 5799998763
No 39
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=99.94 E-value=4e-26 Score=202.07 Aligned_cols=201 Identities=17% Similarity=0.215 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHh-HHHhcc-----CCCCc---ChHHHHHHHHHHHHHHHHHHHHHhcCCCeeEe
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRG-ASAAGN-----SGLDR---SSADYIGMLATVMNAIFLQATMESIGIPTRVQ 72 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~-~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~ 72 (219)
+++++|+.+++.|.++|||||||++.+. +..++. .|++. ++.+.+.++...+|..+++ +|.+.|++++++
T Consensus 76 ~~a~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~gi~~~f~~G~RvTd~~~l~vv~~~lg~vn~~lv~-aL~~~G~~Av~l 154 (460)
T 3s6g_A 76 GLASALAFLQTVGLTPVVVHGGGPQLDAALEAADIPTERVDGLRVTRDEAMPIIRDTLTQANLALVD-AIRDAGGRAAAV 154 (460)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCHHHHHHHHHHHSCCCCCCSSSCCBCTTTHHHHHHHHHHHHHHHHH-HHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccCCCHHHHHHHHHHHHHHHHHHHH-HHHhCCCCceEE
Confidence 6899999999999999999999996654 344442 24432 3455555655578888774 899999999988
Q ss_pred ccccc--c-----ccc---c-hHHH-HHHHHHHhCCCEEEEeCC----CCC-CccChHHHHHHHHHhcCCceEEeeeccC
Q 027731 73 TAFRM--S-----EVA---E-PYIR-RRAVRHLEKGRVVIFAAG----TGN-PFFTTDTAAALRCAEINAEVVLKATNVD 135 (219)
Q Consensus 73 ~~~~~--~-----~~~---~-~~~~-~~~~~~l~~g~ipIv~g~----~g~-~~~~sD~~Aa~lA~~l~Ad~liiltDV~ 135 (219)
++... . ++. + ..++ +.+..+|+.|.|||++++ .|. .++++|++|+.+|.+|+||+|+|+||||
T Consensus 155 sg~~~~a~~~~~~d~g~~G~I~~v~~~~i~~lL~~g~IpVi~p~g~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~ 234 (460)
T 3s6g_A 155 PRGVFEADIVDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETPDGTLVNINADVAVRALVHALQPYKVVFLTGTG 234 (460)
T ss_dssp CSSSEEEEESCTTTTBSEEEEEEECCHHHHHHHHTTCEEEEECEEECTTCCEEEECHHHHHHHHHHHHCCSEEEEECSSC
T ss_pred ecCeEEEEEecCcccCccCcceEEcHHHHHHHHHCCcEEEEECceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 76211 1 110 0 0123 345679999999999964 233 3589999999999999999999999999
Q ss_pred ccccCCCCCCCCCcccccccHH-HHhhC-------CCCCchHHHHHHHHhCCCcEEEEecCCCchHH-HHhcCCCCceEE
Q 027731 136 GVYDDNPRRNPNARLLDTLTYQ-EVTSK-------DLSVMDMTAITLCQENNIPVVVFNLNQPGNIA-KAIQGERVGTLI 206 (219)
Q Consensus 136 Gv~~~dP~~~~~a~~i~~i~~~-e~~~~-------g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~-~~l~g~~~GT~i 206 (219)
|||++ ++++|++++.. |+..+ |+|..|++++..+.+.+.++++++++.|+.+. ++++++++||+|
T Consensus 235 Gv~~~------~~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~gv~~v~iv~g~~~~~Ll~eLft~~g~GT~i 308 (460)
T 3s6g_A 235 GLLDE------DGDILSSINLATDFGDLMQADWVNGGMRLKLEEIKRLLDDLPLSSSVSITRPSELARELFTHAGSGTLI 308 (460)
T ss_dssp SCBCT------TSSBCCEEEHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHTSCTTCEEEEECGGGHHHHHHSSCCSSEEE
T ss_pred cccCC------CCeecceeCcHHHHHHHHhcCCCCCcHHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHhcCCCCceEE
Confidence 99985 46899999985 54432 45566999999888743369999999999985 688999999999
Q ss_pred ecC
Q 027731 207 GGT 209 (219)
Q Consensus 207 ~~~ 209 (219)
.+.
T Consensus 309 ~~~ 311 (460)
T 3s6g_A 309 RRG 311 (460)
T ss_dssp ECC
T ss_pred EcC
Confidence 876
No 40
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=99.94 E-value=1.1e-25 Score=198.86 Aligned_cols=154 Identities=19% Similarity=0.250 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeEecccccccccc---h---HHHHHHHHHHhCCCEEEEeCCCC---------C
Q 027731 43 ADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAE---P---YIRRRAVRHLEKGRVVIFAAGTG---------N 107 (219)
Q Consensus 43 ~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~~~~~~~~~~~---~---~~~~~~~~~l~~g~ipIv~g~~g---------~ 107 (219)
.|.+-..++++++.|++.+|. +.++++.+...+.. + ...+++.++|+.|.|||++||.| .
T Consensus 109 ~D~lls~GE~lS~~lla~~l~-----a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~v~Vv~Gf~g~~~~g~~~tl 183 (446)
T 3tvi_A 109 SDYAASRGEYLNGVILAKYLN-----AEFIDAAEVIFFDKSGCFDEKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKTF 183 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-----CEECCGGGTCBBCC--CBCHHHHHHHHHHHTTTCSSEECCCSEEECTTSCEEEC
T ss_pred HHHHHHhHHHHHHHHHHHHhc-----ceeECHHHheeeCCCCceehHhhHHHHHHHHhcCCeEEeeCceecCCCCCeEEE
Confidence 455556778999999988864 44445444332211 1 12245667899999999998621 2
Q ss_pred CccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC---CCCCchHHHHHHHHhCCCcEEE
Q 027731 108 PFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK---DLSVMDMTAITLCQENNIPVVV 184 (219)
Q Consensus 108 ~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~---g~~~~k~~aa~~a~~~gi~v~I 184 (219)
.+++||++|+.+|.+|+||++++||||||||++||+.+|++++|++++|+|+.++ |.++||++|+++|.++|||++|
T Consensus 184 ~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i~~is~~e~~ela~~Ga~vl~~~a~~~a~~~~ipi~i 263 (446)
T 3tvi_A 184 SRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELSYMGATVLHEEAIFPVKDSGIPINI 263 (446)
T ss_dssp SSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHTTTC----CCSTTTHHHHHSSCCEEE
T ss_pred ccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEcceeCHHHHHHHHhCCCCcchHHHHHHHHHcCCeEEE
Confidence 4578999999999999999999999999999999999999999999999998875 7789999999999999999999
Q ss_pred EecCCCchHHHHhcCCCCceEEecCC
Q 027731 185 FNLNQPGNIAKAIQGERVGTLIGGTW 210 (219)
Q Consensus 185 ~~g~~~~~i~~~l~g~~~GT~i~~~~ 210 (219)
.|+++|+ ..||+|.++.
T Consensus 264 ~~~~~p~---------~~GT~i~~~~ 280 (446)
T 3tvi_A 264 KNTNKPS---------DPGTLILSDT 280 (446)
T ss_dssp EETTBTT---------SCCEEEECTT
T ss_pred ecCCCCC---------CCCEEEecCC
Confidence 9999886 5799998764
No 41
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=99.93 E-value=5.5e-26 Score=190.90 Aligned_cols=201 Identities=16% Similarity=0.206 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHCCCeEEEEECCch-HHHhHHHhcc--CCCCcChHH-----HHHHHHHHHHHHHHHHHHHhcCCCeeEec
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGN-IFRGASAAGN--SGLDRSSAD-----YIGMLATVMNAIFLQATMESIGIPTRVQT 73 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~-~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~gi~a~~~~ 73 (219)
..|++|+++.+.||++||+||.|+ ++........ ...+..+++ ..++++.+++..| ...|...|++....+
T Consensus 35 ~~a~~i~~~~~~g~~vvi~hGnGPQVG~i~~~~~~~~~~~~~~pld~~~A~sqG~igy~l~~al-~~~l~~~g~~~~v~t 113 (317)
T 3kzf_A 35 IAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAAGVSPEMPLHVCGAMSQGFIGYMMSQAM-DNVFCANNEPANCVT 113 (317)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHSTTSSSCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHHhccccCCCCCccccCchhhHHHHHHHHHHH-HHHHHhcCCCCceeE
Confidence 458899999999999999999976 3222211110 112233443 3456666664443 567888887543333
Q ss_pred cccc-----cc--cc--------------------ch-----------H-------------HHHH-HHHHHhCCCEEEE
Q 027731 74 AFRM-----SE--VA--------------------EP-----------Y-------------IRRR-AVRHLEKGRVVIF 101 (219)
Q Consensus 74 ~~~~-----~~--~~--------------------~~-----------~-------------~~~~-~~~~l~~g~ipIv 101 (219)
..+. .| |. ++ + ++.+ +..+|+.|.|||+
T Consensus 114 ~itq~~Vd~~Dpaf~~PtKpiG~~y~~~ea~~~~~~~~~~~~~ed~grg~RrvV~sP~P~~iVe~~~I~~LL~~G~IvI~ 193 (317)
T 3kzf_A 114 CVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGKILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVIC 193 (317)
T ss_dssp BCCEEEECTTCGGGTSCCEECC--------------------------CCCCEECCCCEEEETTHHHHHHHHHTTCEEEC
T ss_pred EEEEEEECCCCccccCCCCCcCCCCCHHHHHHHHHhccCCeEeecCCCCeeeecCCCCCcceECHHHHHHHHHCCCEEEE
Confidence 2211 00 00 00 0 1223 4468999999666
Q ss_pred eCCCC-------------CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC------
Q 027731 102 AAGTG-------------NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK------ 162 (219)
Q Consensus 102 ~g~~g-------------~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~------ 162 (219)
+|+.| ..++|+|++|+.+|.+|+||+|+|+|||||||+ ||+ +|++++|++++++|+.++
T Consensus 194 aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~LIiLTDVdGVy~-dp~-~p~a~~I~~it~~e~~~li~~g~~ 271 (317)
T 3kzf_A 194 TNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACI-NYK-KPDERKLEEIKLSEILALEKDGHF 271 (317)
T ss_dssp CGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCEEECCSSSSCEE-SSS-CSSCEECCEEEHHHHHHHHTTTSC
T ss_pred eCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEEEEecCCCeeeC-CCC-CCCCeECcCcCHHHHHHHHhcCCC
Confidence 53211 235889999999999999999999999999999 897 689999999999887653
Q ss_pred --CCCCchHHHHHHHHhCC-CcEEEEecCCCchHHHHhcCCCCceEEecC
Q 027731 163 --DLSVMDMTAITLCQENN-IPVVVFNLNQPGNIAKAIQGERVGTLIGGT 209 (219)
Q Consensus 163 --g~~~~k~~aa~~a~~~g-i~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 209 (219)
|+|..|+++|..+.+.+ .+++|+|+ +.+.++|+|+ .||+|.++
T Consensus 272 ~~GGM~pKl~AA~~av~~gg~~v~I~s~---~~l~~~l~G~-~GT~I~~d 317 (317)
T 3kzf_A 272 AAGSMGPKVRAAIEFTQATGKMSIITSL---STAVDALNGK-CGTRIIKD 317 (317)
T ss_dssp C--CCHHHHHHHHHHHHHHCCCEEECCG---GGHHHHHTTS-SSEEEECC
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEcch---HHHHHHHCCC-CCeEEecC
Confidence 45667999999887654 57999995 4677899997 89999864
No 42
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=99.93 E-value=4.8e-25 Score=187.68 Aligned_cols=199 Identities=20% Similarity=0.251 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHCCCeEEEEECCch-HHHh---HHHhcc--CCCCcChHHHHH-----HHHHHHHHHHHHHHHHhcCCCee
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGN-IFRG---ASAAGN--SGLDRSSADYIG-----MLATVMNAIFLQATMESIGIPTR 70 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~-~~~~---~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~l~~~~l~~~gi~a~ 70 (219)
.+|++|+.|++.|+++|||||||+ ++.. +..++. .+.+..+.+... ++...++..+ ...|.+.|+...
T Consensus 49 ~~a~~Ia~L~~~G~~vVvVHGgGPQVG~i~~~l~~~~~~~~~~~~~~l~~~~a~tqg~ig~~l~~~l-~~~l~~~gi~~~ 127 (332)
T 4axs_A 49 IPAAKIAALIQEGHEVIVGHGNGPQVGMIFNAFADAKKANEKTALVPFAEAGGMSQGYIGYHMLTAI-SNELKKLNIQKD 127 (332)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTTTTSCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHTTCCCC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHhccccCCCCCchhHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCcc
Confidence 478999999999999999999987 3332 222221 122333333322 2333444444 456777776532
Q ss_pred Ee-----ccccccc------------c--------------------cc--------h----HHHHH-HHHHHhCCCEEE
Q 027731 71 VQ-----TAFRMSE------------V--------------------AE--------P----YIRRR-AVRHLEKGRVVI 100 (219)
Q Consensus 71 ~~-----~~~~~~~------------~--------------------~~--------~----~~~~~-~~~~l~~g~ipI 100 (219)
.. ...+..| + .. + .++.. +..++++|+|||
T Consensus 128 v~~~vtqv~V~~~D~af~~p~K~iG~~~~~~ea~~l~~~~~~~~~~~~~g~rrvV~sp~p~~ive~~~I~~L~~~g~Ivi 207 (332)
T 4axs_A 128 VLYFLTQTIVDANDPAFKNPTKPVGPFYSSKEIAEANNPNSVIVEDAGRGFRKVVASPIPVDFIGIDAIKQNVNNGCVCI 207 (332)
T ss_dssp EEECCCEEEECTTCHHHHSCCEECSCCCC--------CTTSCCC--------CEECCCCEEEETTHHHHHHHHHTTCEEE
T ss_pred eeeeeeeeeecccchhhhCcCceeccccCHHHHHHHHhcCCEEEEccCCCceEECCCCCCceeecHHHHHHhhcCCeEEE
Confidence 11 1111110 0 00 0 02223 446889999988
Q ss_pred EeCC------------CC-CCccChHHHHHHHHHhcCCceEEeeeccCccccCCCCCCCCCcccccccHHHHhhC-----
Q 027731 101 FAAG------------TG-NPFFTTDTAAALRCAEINAEVVLKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSK----- 162 (219)
Q Consensus 101 v~g~------------~g-~~~~~sD~~Aa~lA~~l~Ad~liiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~----- 162 (219)
.++. .| ..++|+|++|+.+|.+++||+|+|+|||||||+++|+ |++++|++++.+|+.++
T Consensus 208 ~~ggggipv~~~~~~~~G~~~vid~D~~Aa~lA~~l~Ad~LiiLTdV~gv~~~~~~--~~~~~i~~it~~e~~~~~~~g~ 285 (332)
T 4axs_A 208 VGGGGGIPTIIQDNQYIGVDGVIDKDFALAKIADAVNADIFVVLTAVDYVYVDFNK--PTQKALKTVDVKALNNFINQDQ 285 (332)
T ss_dssp CCGGGCEEEEESSSCEEECSSCCCHHHHHHHHHHHTTCSEEEEECSCSSCEESTTS--TTCEECSSCBHHHHHHHHHTTC
T ss_pred ecccCCCCccccCCcccCceeeechHHHHHHHHHHhCCceEEEEecCCceEcCCCC--cchhhcccCCHHHHHHHHHCCC
Confidence 6542 11 2469999999999999999999999999999998874 77899999999987653
Q ss_pred ---CCCCchHHHHHHHHhCCC--cEEEEecCCCchHHHHhcCCCCceEEe
Q 027731 163 ---DLSVMDMTAITLCQENNI--PVVVFNLNQPGNIAKAIQGERVGTLIG 207 (219)
Q Consensus 163 ---g~~~~k~~aa~~a~~~gi--~v~I~~g~~~~~i~~~l~g~~~GT~i~ 207 (219)
|+|.+|++||..+.+.|. .++|.+ ++.+.++++|+ .||+|.
T Consensus 286 ~~~GgM~pKv~Aa~~~v~~g~g~~~iI~~---~~~~~~~l~g~-~GT~Iv 331 (332)
T 4axs_A 286 FAKGSMLPKIKAAMGFVNGHPNRSAIIAD---LSKVEDALKGL-SGTKII 331 (332)
T ss_dssp SCTTTTHHHHHHHHHHHTTCTTCEEEEEC---STTHHHHTTTS-SSEEEB
T ss_pred cCcCCcHHHHHHHHHHHHhCCCcEEEECC---HHHHHHHHCCC-CCcEEe
Confidence 457779999999988876 456654 56788999996 799996
No 43
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=99.92 E-value=9.7e-26 Score=199.79 Aligned_cols=201 Identities=17% Similarity=0.226 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHCCCeEEEEECCchHHHh-HHHhcc-----CCCCcCh---HHHHHHHHHHHHHHHHHHHHHhcCCCeeEe
Q 027731 2 AIAREVASVTRLGIEVAIVVGGGNIFRG-ASAAGN-----SGLDRSS---ADYIGMLATVMNAIFLQATMESIGIPTRVQ 72 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~GgG~~~~~-~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~gi~a~~~ 72 (219)
+++++|+.+++.|.++|||||||++.+. +..++. .|++.+. .+.+.++...+|..+++ +|.+.|++++++
T Consensus 79 ~va~dI~~l~~~G~~~VvVHGgg~~i~~~l~~~gi~~~f~~G~RvTd~~~l~vv~~~~g~vn~~Lv~-aL~~~G~~Av~l 157 (467)
T 3s6k_A 79 ALTSSLSFLQEVGLTPIVLHGAGPQLDAELSAAGIEKQTVNGLRVTSPHALAIVRKVFQASNLKLVE-ALQQNGARATSI 157 (467)
T ss_dssp HHHHHHHHHHTTSCCCCCCCCCCHHHHHHHHTTSCCCCCCSSSCCBCHHHHHHHHHHHHHHHHHHHH-HHHHHTCCBCCC
T ss_pred HHHHHHHHHHHCCCcEEEEECCChHHHHHHHHcCCCccccCCccCCCHHHHHHHHHHHHHHHHHHHH-HHHhCCCCceEE
Confidence 6899999999999999999999996554 333332 2444333 34455555578888774 889999999987
Q ss_pred ccccc--c-----ccc---c-hHHH-HHHHHHHhCCCEEEEeCC----CC-CCccChHHHHHHHHHhcCCceEEeeeccC
Q 027731 73 TAFRM--S-----EVA---E-PYIR-RRAVRHLEKGRVVIFAAG----TG-NPFFTTDTAAALRCAEINAEVVLKATNVD 135 (219)
Q Consensus 73 ~~~~~--~-----~~~---~-~~~~-~~~~~~l~~g~ipIv~g~----~g-~~~~~sD~~Aa~lA~~l~Ad~liiltDV~ 135 (219)
++... . ++. + ..++ +.+..+|+.|.|||+++. .| ..++++|++|+.+|.+|+||+|+|+||||
T Consensus 158 sg~~~~a~~~~~~d~g~~G~I~~v~~~~i~~lL~~g~IpVi~pvg~~~~G~~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~ 237 (467)
T 3s6k_A 158 TGGVFEAEYLNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTG 237 (467)
T ss_dssp CSSSBCCCBSCSSSSBSBBCCCCBCCHHHHTHHHHTCBCCCCSCCCCSSSCCCBCCHHHHHHHHHHHHCCSSCCCCCSSC
T ss_pred cCccEEEEeccCcccCccceEEEEcHHHHHHHHHCCCEEEEECceECCCCcEEecCHHHHHHHHHHhcCCCEEEEEeccc
Confidence 65211 1 110 0 0123 345578999999999953 23 34689999999999999999999999999
Q ss_pred ccccCCCCCCCCCcccccccHH-HHhhC-------CCCCchHHHHHHHHhCCCcEEEEecCCCchHH-HHhcCCCCceEE
Q 027731 136 GVYDDNPRRNPNARLLDTLTYQ-EVTSK-------DLSVMDMTAITLCQENNIPVVVFNLNQPGNIA-KAIQGERVGTLI 206 (219)
Q Consensus 136 Gv~~~dP~~~~~a~~i~~i~~~-e~~~~-------g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~-~~l~g~~~GT~i 206 (219)
|||++| +++|++++.. |+..+ |+|..|++++..+.+.+.++++++++.|+.+. ++++++++||+|
T Consensus 238 Gv~~~~------~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~gv~~~~iv~g~~~~~Ll~eLft~~g~GT~i 311 (467)
T 3s6k_A 238 GLLDAE------GKLIDSINLSTEYDHLMQQPWINGGMRVKIEQIKDLLDRLPLESSVSITRPADLAKELFTHKGSGTLV 311 (467)
T ss_dssp SCCCSS------CCCCCCCCTTTTTHHHHTSSSCCSHHHHHHHHHHHHHTTSCSSCCBCCCCTTTHHHHHHSSCTTSCCB
T ss_pred ceeCCC------CCCccccChHHHHHHHHhcCCCCCchHHHHHHHHHHHhCCCcEEEEEeCCchHHHHHHhcCCCcceEE
Confidence 999853 6788888874 43322 45566999998888743368999999999986 678999999999
Q ss_pred ecC
Q 027731 207 GGT 209 (219)
Q Consensus 207 ~~~ 209 (219)
.+.
T Consensus 312 ~~~ 314 (467)
T 3s6k_A 312 RRG 314 (467)
T ss_dssp CCC
T ss_pred eCC
Confidence 876
No 44
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=64.92 E-value=13 Score=27.58 Aligned_cols=58 Identities=16% Similarity=0.247 Sum_probs=33.3
Q ss_pred EeeeccCccccCCCCC-CCCCcccccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhc
Q 027731 129 LKATNVDGVYDDNPRR-NPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 198 (219)
Q Consensus 129 iiltDV~Gv~~~dP~~-~~~a~~i~~i~~~e~~~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~ 198 (219)
.+++|+||+++++-.. .++.+.+..++.. +..+...+.+.|+++.|+++. .....++.
T Consensus 11 liv~D~DGtL~d~~~~~~~~g~~~~~f~~~----------D~~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 11 LLVCNIDGCLTNGHIYVSGDQKEIISYDVK----------DAIGISLLKKSGIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp EEEEECCCCCSCSCCBCCSSCCCEEEEEHH----------HHHHHHHHHHTTCEEEEECSS--CCCHHHHH
T ss_pred EEEEeCccceECCcEEEcCCCCEEEEEecC----------cHHHHHHHHHCCCEEEEEeCc--HHHHHHHH
Confidence 4679999999864321 2333444444432 233566667778887777766 33344444
No 45
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=63.88 E-value=7.5 Score=28.70 Aligned_cols=59 Identities=22% Similarity=0.357 Sum_probs=31.2
Q ss_pred EeeeccCccccCCC-CCCCCCcccccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHh
Q 027731 129 LKATNVDGVYDDNP-RRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAI 197 (219)
Q Consensus 129 iiltDV~Gv~~~dP-~~~~~a~~i~~i~~~e~~~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l 197 (219)
.++.|+||.+.... ...++.+.+..++.. ..++.+.+.+.|+++.|++++....+..++
T Consensus 10 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~----------~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~ 69 (180)
T 1k1e_A 10 FVITDVDGVLTDGQLHYDANGEAIKSFHVR----------DGLGIKMLMDADIQVAVLSGRDSPILRRRI 69 (180)
T ss_dssp EEEEECTTTTSCSEEEEETTEEEEEEEEHH----------HHHHHHHHHHTTCEEEEEESCCCHHHHHHH
T ss_pred EEEEeCCCCcCCCCeeeccCcceeeeeccc----------hHHHHHHHHHCCCeEEEEeCCCcHHHHHHH
Confidence 35689999876431 111123333344332 123455556667777777776555444443
No 46
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=61.11 E-value=11 Score=26.88 Aligned_cols=58 Identities=17% Similarity=0.249 Sum_probs=27.6
Q ss_pred eeeccCccccCCCCC-CCCCcccccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHh
Q 027731 130 KATNVDGVYDDNPRR-NPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAI 197 (219)
Q Consensus 130 iltDV~Gv~~~dP~~-~~~a~~i~~i~~~e~~~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l 197 (219)
+++|.||.+...... .+..+.++.++.. ..++.+.+.+.|+++.|++++....+...+
T Consensus 12 v~~DlDGTL~~~~~~~~~~~~~~~~~~~~----------~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l 70 (162)
T 2p9j_A 12 LIMDIDGVLTDGKLYYTEHGETIKVFNVL----------DGIGIKLLQKMGITLAVISGRDSAPLITRL 70 (162)
T ss_dssp EEECCTTTTSCSEEEEETTEEEEEEEEHH----------HHHHHHHHHTTTCEEEEEESCCCHHHHHHH
T ss_pred EEEecCcceECCceeecCCCceeeeeccc----------HHHHHHHHHHCCCEEEEEeCCCcHHHHHHH
Confidence 578999987643211 1122223333321 123344445556666666555444444433
No 47
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=58.89 E-value=38 Score=25.29 Aligned_cols=71 Identities=17% Similarity=0.044 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhcCCCeeEecccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEe
Q 027731 54 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLK 130 (219)
Q Consensus 54 ~~~l~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~lii 130 (219)
|...+++.|.+.|+.+...... .|-. ..+.+.+.++++...+.|++| |.....-|.+...+|..++.+ |.+
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv--~Dd~-~~I~~~l~~a~~~~DlVittG--G~g~~~~D~T~ea~a~~~~~~-l~~ 94 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVV--MDDL-DEIGWAFRVALEVSDLVVSSG--GLGPTFDDMTVEGFAKCIGQD-LRI 94 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE--CSCH-HHHHHHHHHHHHHCSEEEEES--CCSSSTTCCHHHHHHHHHTCC-CEE
T ss_pred HHHHHHHHHHHCCCEEEEEEEe--CCCH-HHHHHHHHHHHhcCCEEEEcC--CCcCCcccchHHHHHHHcCCC-eee
Confidence 4555678889999987643211 1111 112233445666677888887 455678899999999999965 544
No 48
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=40.67 E-value=16 Score=26.43 Aligned_cols=20 Identities=0% Similarity=-0.107 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCeEEEEEC
Q 027731 3 IAREVASVTRLGIEVAIVVG 22 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~G 22 (219)
..+.|++++++|++++|++|
T Consensus 29 ~~~al~~l~~~G~~iii~Tg 48 (142)
T 2obb_A 29 AVETLKLLQQEKHRLILWSV 48 (142)
T ss_dssp HHHHHHHHHHTTCEEEECCS
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46788999999999999985
No 49
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=40.56 E-value=52 Score=25.52 Aligned_cols=51 Identities=14% Similarity=0.025 Sum_probs=34.7
Q ss_pred EeeeccCccccCCCCCCCCCcccccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHhc
Q 027731 129 LKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAIQ 198 (219)
Q Consensus 129 iiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l~ 198 (219)
++++|.||-+-.+ + + +++.. -.++.+.+.+.|+++.|++|+.+..+.+.+.
T Consensus 6 li~~DlDGTLl~~-----~-~---~i~~~----------~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l~ 56 (246)
T 3f9r_A 6 LLLFDVDGTLTPP-----R-L---CQTDE----------MRALIKRARGAGFCVGTVGGSDFAKQVEQLG 56 (246)
T ss_dssp EEEECSBTTTBST-----T-S---CCCHH----------HHHHHHHHHHTTCEEEEECSSCHHHHHHHHC
T ss_pred EEEEeCcCCcCCC-----C-C---ccCHH----------HHHHHHHHHHCCCEEEEECCCCHHHHHHHhh
Confidence 4679999965432 1 1 23321 2345667788999999999999888877665
No 50
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=39.31 E-value=37 Score=26.76 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=33.2
Q ss_pred EeeeccCccccCCCCCCCCCcccccccHHHHhhCCCCCchHHHHHHHHhCCCcEEEEecCCCchHHHHh
Q 027731 129 LKATNVDGVYDDNPRRNPNARLLDTLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNQPGNIAKAI 197 (219)
Q Consensus 129 iiltDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~~g~~~~k~~aa~~a~~~gi~v~I~~g~~~~~i~~~l 197 (219)
++++|.||-+-.+ + + +++.. -.++.+.+.+.|+.+.++.|+.+..+.+++
T Consensus 7 li~~DlDGTLl~~-----~-~---~i~~~----------~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~ 56 (282)
T 1rkq_A 7 LIAIDMDGTLLLP-----D-H---TISPA----------VKNAIAAARARGVNVVLTTGRPYAGVHNYL 56 (282)
T ss_dssp EEEECCCCCCSCT-----T-S---CCCHH----------HHHHHHHHHHTTCEEEEECSSCGGGTHHHH
T ss_pred EEEEeCCCCCCCC-----C-C---cCCHH----------HHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 4679999965432 1 1 23322 124566678889999999999887776554
No 51
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=35.62 E-value=1.6e+02 Score=25.19 Aligned_cols=72 Identities=17% Similarity=0.155 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhcCCCeeEecccccccccchHHHHHHHHHHhCCCEEEEeCCCCCCccChHHHHHHHHHhcCCceEEee
Q 027731 54 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKA 131 (219)
Q Consensus 54 ~~~l~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~~~~~~l~~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~Ad~liil 131 (219)
|...+...|++.|..+..+.-. .|-. ..+.+.+.++++.-.+.|++| |...+.-|.+...++..++.+ +.|+
T Consensus 209 N~~~L~~~l~~~G~~v~~~~iv--~Dd~-~~i~~~l~~a~~~~DlVittG--G~s~g~~D~t~~al~~~lg~~-~~f~ 280 (419)
T 2fts_A 209 NRSTLLATIQEHGYPTINLGIV--GDNP-DDLLNALNEGISRADVIITSG--GVSMGEKDYLKQVLDIDLHAQ-IHFG 280 (419)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEE--CSSH-HHHHHHHHHHHHHCSEEEEES--CCSSSCCHHHHHHHHTTTCCE-EEES
T ss_pred chHHHHHHHHHCCCEEEEEeec--CCCH-HHHHHHHHHHHhcCCEEEEcC--CCcCCCcccHHHHHHHHcCCc-eEEe
Confidence 4555678889999887643211 1111 112234445666567778887 456778999999998888874 5543
No 52
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=35.52 E-value=43 Score=24.58 Aligned_cols=11 Identities=45% Similarity=0.646 Sum_probs=8.5
Q ss_pred eeeccCccccC
Q 027731 130 KATNVDGVYDD 140 (219)
Q Consensus 130 iltDV~Gv~~~ 140 (219)
++.|.||++..
T Consensus 29 vifD~DGTL~~ 39 (188)
T 2r8e_A 29 LILDVDGVLSD 39 (188)
T ss_dssp EEECCCCCCBC
T ss_pred EEEeCCCCcCC
Confidence 45799998875
No 53
>2azn_A HTP reductase, putative 5-amino-6-(5-phosphoribosylamino)uracil; oxidoreductase; HET: MA5 NAP EPE; 2.70A {Methanocaldococcus jannaschii} SCOP: c.71.1.2
Probab=35.20 E-value=40 Score=25.77 Aligned_cols=25 Identities=20% Similarity=0.428 Sum_probs=13.8
Q ss_pred HHHHHHHHHHCCCeEEEEECCchHH
Q 027731 3 IAREVASVTRLGIEVAIVVGGGNIF 27 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG~~~ 27 (219)
+...+++|+++|.+=|+|.|||.++
T Consensus 131 l~~~l~~L~~~g~~~ilveGG~~l~ 155 (219)
T 2azn_A 131 LKKLMDILYDKGIKSILLEGGGTLN 155 (219)
T ss_dssp HHHHHHHHHHTTCCEEEEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeCHHHH
Confidence 3445556666666656666554443
No 54
>2gd9_A Hypothetical protein YYAP; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=33.60 E-value=48 Score=24.59 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=17.9
Q ss_pred HHHHHHHHHHCCCeEEEEECCchHHH
Q 027731 3 IAREVASVTRLGIEVAIVVGGGNIFR 28 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG~~~~ 28 (219)
+.+.+++|++++.+=|+|.||+.+..
T Consensus 107 l~~~l~~L~~~~~~~i~v~GG~~l~~ 132 (189)
T 2gd9_A 107 ILEEVNKLKKNPGKDIWLYGGASLIT 132 (189)
T ss_dssp HHHHHHHHHHSCCSEEEEEECHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEChHHHHH
Confidence 55667777777777778887665544
No 55
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=33.32 E-value=77 Score=24.78 Aligned_cols=29 Identities=17% Similarity=0.251 Sum_probs=22.4
Q ss_pred HHHHHHHHhCCCcEEEEecCCCchHHHHh
Q 027731 169 MTAITLCQENNIPVVVFNLNQPGNIAKAI 197 (219)
Q Consensus 169 ~~aa~~a~~~gi~v~I~~g~~~~~i~~~l 197 (219)
.++.+.+.+.|+++.|++|+.+..+..++
T Consensus 32 ~~~l~~l~~~G~~~~iaTGR~~~~~~~~~ 60 (275)
T 1xvi_A 32 APWLTRLREANVPVILCSSKTSAEMLYLQ 60 (275)
T ss_dssp HHHHHHHHHTTCCEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 45666777889999999999887766554
No 56
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=32.67 E-value=1.5e+02 Score=21.76 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhcCCCeeEecccccccccchHHHHHHHHHHhC--CCEEEEeCCCCCCccChHHHHHHHHHhcC
Q 027731 54 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEK--GRVVIFAAGTGNPFFTTDTAAALRCAEIN 124 (219)
Q Consensus 54 ~~~l~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~~~~~~l~~--g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~ 124 (219)
|...+++.|++.|..+....-. .|-. ..+.+.+.++++. -.+.|++| |.....-|.+...++..++
T Consensus 29 n~~~l~~~L~~~G~~v~~~~iv--~Dd~-~~i~~~l~~a~~~~~~DlVittG--G~g~~~~D~t~ea~~~~~~ 96 (172)
T 1mkz_A 29 SGHYLRDSAQEAGHHVVDKAIV--KENR-YAIRAQVSAWIASDDVQVVLITG--GTGLTEGDQAPEALLPLFD 96 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE--CSCH-HHHHHHHHHHHHSSSCCEEEEES--CCSSSTTCCHHHHHGGGCS
T ss_pred cHHHHHHHHHHCCCeEeEEEEe--CCCH-HHHHHHHHHHHhcCCCCEEEeCC--CCCCCCCCCHHHHHHHHhc
Confidence 4455677888899876543211 1111 1122344556664 56778887 4455677888888887765
No 57
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=32.51 E-value=49 Score=22.15 Aligned_cols=21 Identities=14% Similarity=0.234 Sum_probs=17.2
Q ss_pred HHHHHHHHHHCCCeEEEEECC
Q 027731 3 IAREVASVTRLGIEVAIVVGG 23 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~Gg 23 (219)
+.+.+++|++.|+++++++++
T Consensus 23 ~~~~l~~L~~~G~~~~i~S~~ 43 (137)
T 2pr7_A 23 WRNLLAAAKKNGVGTVILSND 43 (137)
T ss_dssp HHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 456678889999999999965
No 58
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=32.31 E-value=1.5e+02 Score=21.93 Aligned_cols=66 Identities=12% Similarity=0.039 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhcCCCeeEecccccccccchHHHHHHHHHHhC--CCEEEEeCCCCCCccChHHHHHHHHHhcC
Q 027731 54 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEK--GRVVIFAAGTGNPFFTTDTAAALRCAEIN 124 (219)
Q Consensus 54 ~~~l~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~~~~~~l~~--g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~ 124 (219)
|...+++.|++.|..+....-. .|-. ..+.+.+.++++. -.+.|++| |.....-|.+...++..++
T Consensus 41 n~~~L~~~l~~~G~~v~~~~iv--~Dd~-~~I~~al~~a~~~~~~DlVittG--G~s~g~~D~t~eal~~~~~ 108 (178)
T 2pjk_A 41 SGDIIKQLLIENGHKIIGYSLV--PDDK-IKILKAFTDALSIDEVDVIISTG--GTGYSPTDITVETIRKLFD 108 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE--CSCH-HHHHHHHHHHHTCTTCCEEEEES--CCSSSTTCCHHHHHGGGCS
T ss_pred HHHHHHHHHHHCCCEEEEEEEe--CCCH-HHHHHHHHHHHhcCCCCEEEECC--CCCCCCCcchHHHHHHHhc
Confidence 4556678889999886643211 1111 1123344566665 46888887 4456678888888887765
No 59
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=31.77 E-value=43 Score=28.28 Aligned_cols=23 Identities=22% Similarity=0.140 Sum_probs=18.9
Q ss_pred HHHHHHHHHHCCCeEEEEECCch
Q 027731 3 IAREVASVTRLGIEVAIVVGGGN 25 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG~ 25 (219)
..+-|+.|+++|+++.||+||+.
T Consensus 226 ~~eLi~~L~~~G~~v~IVSgg~~ 248 (385)
T 4gxt_A 226 MVDLYRSLEENGIDCYIVSASFI 248 (385)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHHHCCCeEEEEcCCcH
Confidence 34667888999999999998764
No 60
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=31.60 E-value=64 Score=24.79 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=18.4
Q ss_pred HHHHHHHHHHCCCeEEEEEC-Cc
Q 027731 3 IAREVASVTRLGIEVAIVVG-GG 24 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~G-gG 24 (219)
-.+.|++++++|+++++++| +|
T Consensus 27 ~~~ai~~l~~~Gi~v~laTgrs~ 49 (266)
T 3pdw_A 27 ACEFVRTLKDRGVPYLFVTNNSS 49 (266)
T ss_dssp HHHHHHHHHHTTCCEEEEESCCS
T ss_pred HHHHHHHHHHCCCeEEEEeCCCC
Confidence 35678899999999999997 44
No 61
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=31.41 E-value=49 Score=22.75 Aligned_cols=21 Identities=19% Similarity=0.427 Sum_probs=17.6
Q ss_pred HHHHHHHHHHCCCeEEEEECC
Q 027731 3 IAREVASVTRLGIEVAIVVGG 23 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~Gg 23 (219)
..+.+++++++|+++++++|-
T Consensus 29 ~~~~l~~l~~~Gi~~~iaTGR 49 (126)
T 1xpj_A 29 VIEQLREYHQLGFEIVISTAR 49 (126)
T ss_dssp HHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHhCCCeEEEEeCC
Confidence 456788899999999999963
No 62
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=30.78 E-value=1.5e+02 Score=21.49 Aligned_cols=66 Identities=12% Similarity=0.140 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhcCCCeeEecccccccccchHHHHHHHHHHh--CCCEEEEeCCCCCCccChHHHHHHHHHhcC
Q 027731 54 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLE--KGRVVIFAAGTGNPFFTTDTAAALRCAEIN 124 (219)
Q Consensus 54 ~~~l~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~~~~~~l~--~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~ 124 (219)
|...+++.|++.|..+....-. .|-. ..+.+.+.++++ .-.+.|++| |.....-|.+...++..++
T Consensus 32 n~~~l~~~L~~~G~~v~~~~iv--~Dd~-~~i~~~l~~~~~~~~~DlVittG--G~g~g~~D~t~ea~~~~~~ 99 (169)
T 1y5e_A 32 SGQLLHELLKEAGHKVTSYEIV--KDDK-ESIQQAVLAGYHKEDVDVVLTNG--GTGITKRDVTIEAVSALLD 99 (169)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEE--CSSH-HHHHHHHHHHHTCTTCSEEEEEC--CCSSSTTCCHHHHHHTTCS
T ss_pred hHHHHHHHHHHCCCeEeEEEEe--CCCH-HHHHHHHHHHHhcCCCCEEEEcC--CCCCCCCCCcHHHHHHHcC
Confidence 4455677888899876543211 1111 122334556666 557888887 4445667777777776654
No 63
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=30.56 E-value=69 Score=23.77 Aligned_cols=21 Identities=19% Similarity=0.053 Sum_probs=16.7
Q ss_pred HHHHHHHHHHCCCeEEEEECC
Q 027731 3 IAREVASVTRLGIEVAIVVGG 23 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~Gg 23 (219)
+.+.+..|+++|++++||+++
T Consensus 97 ~~~~l~~l~~~g~~~~ivS~~ 117 (232)
T 3fvv_A 97 AVDVVRGHLAAGDLCALVTAT 117 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 345677888899999999964
No 64
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=29.92 E-value=74 Score=24.36 Aligned_cols=21 Identities=33% Similarity=0.393 Sum_probs=15.9
Q ss_pred HHHHHHHHHCCCeEEEEECCc
Q 027731 4 AREVASVTRLGIEVAIVVGGG 24 (219)
Q Consensus 4 a~~i~~l~~~g~~vviV~GgG 24 (219)
+++.+.+...-.++|||+|=|
T Consensus 36 ~~~~a~~l~~A~~ViIVPGYG 56 (203)
T 2fsv_C 36 AEDAAFIMKNASKVIIVPGYG 56 (203)
T ss_dssp HHHHHHHHHHCSEEEEEECHH
T ss_pred HHHHHHHHHhCCcEEEEcCch
Confidence 456777777778999999755
No 65
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=29.23 E-value=77 Score=24.35 Aligned_cols=21 Identities=19% Similarity=0.219 Sum_probs=16.1
Q ss_pred HHHHHHHHHCCCeEEEEECCc
Q 027731 4 AREVASVTRLGIEVAIVVGGG 24 (219)
Q Consensus 4 a~~i~~l~~~g~~vviV~GgG 24 (219)
+++.+.+...-.++|||+|=|
T Consensus 35 ~~~~a~~l~~A~~ViIVPGYG 55 (207)
T 1djl_A 35 LDNAIDMIREANSIIITPGYG 55 (207)
T ss_dssp HHHHHHHHHHCSEEEEEECHH
T ss_pred HHHHHHHHHhCCeEEEECCch
Confidence 456777777778999999755
No 66
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=27.74 E-value=1.6e+02 Score=21.34 Aligned_cols=66 Identities=6% Similarity=0.100 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhcCCCeeEecccccccccchHHHHHHHHHHh--CCCEEEEeCCCCCCccChHHHHHHHHHhcC
Q 027731 54 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLE--KGRVVIFAAGTGNPFFTTDTAAALRCAEIN 124 (219)
Q Consensus 54 ~~~l~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~~~~~~l~--~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~ 124 (219)
|...+++.|++.|..+...... .|-. ..+.+.+.++++ .-.+.|++| |.....-|.+...++..++
T Consensus 22 n~~~l~~~l~~~G~~v~~~~iv--~Dd~-~~i~~~l~~~~~~~~~DlVittG--G~g~g~~D~t~ea~~~~~~ 89 (164)
T 2is8_A 22 THLAIREVLAGGPFEVAAYELV--PDEP-PMIKKVLRLWADREGLDLILTNG--GTGLAPRDRTPEATRELLD 89 (164)
T ss_dssp HHHHHHHHHTTSSEEEEEEEEE--CSCH-HHHHHHHHHHHHTSCCSEEEEES--CCSSSTTCCHHHHHHTTCS
T ss_pred hHHHHHHHHHHCCCeEeEEEEc--CCCH-HHHHHHHHHHHhcCCCCEEEEcC--CCCCCCCCChHHHHHHHhC
Confidence 4455677888899876532211 1111 122344556666 457888887 4456678888888887654
No 67
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=27.64 E-value=64 Score=23.40 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=17.9
Q ss_pred HHHHHHHHHHCCCeEEEEECCc
Q 027731 3 IAREVASVTRLGIEVAIVVGGG 24 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG 24 (219)
+.+.|++|++.|++++|++|+.
T Consensus 73 ~~e~L~~L~~~G~~v~ivT~~~ 94 (187)
T 2wm8_A 73 VPEVLKRLQSLGVPGAAASRTS 94 (187)
T ss_dssp HHHHHHHHHHHTCCEEEEECCS
T ss_pred HHHHHHHHHHCCceEEEEeCCC
Confidence 4567888888999999999654
No 68
>1cz3_A Dihydrofolate reductase; dimer, hyperthermophIle, oxidoreductase; 2.10A {Thermotoga maritima} SCOP: c.71.1.1 PDB: 1d1g_A*
Probab=27.52 E-value=57 Score=23.71 Aligned_cols=26 Identities=31% Similarity=0.414 Sum_probs=18.2
Q ss_pred HHHHHHHHHHCCCeEEEEECCchHHH
Q 027731 3 IAREVASVTRLGIEVAIVVGGGNIFR 28 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG~~~~ 28 (219)
+.+.++.|.+++.+-|+|.||+.+..
T Consensus 82 l~~~l~~l~~~~~~~i~v~GG~~l~~ 107 (168)
T 1cz3_A 82 PADVVKFLEGKGYERVAVIGGKTVFT 107 (168)
T ss_dssp HHHHHHHHHHTTCSEEEEEECHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCHHHHH
Confidence 55667778777777788887765543
No 69
>1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A
Probab=27.07 E-value=40 Score=24.49 Aligned_cols=25 Identities=32% Similarity=0.573 Sum_probs=16.5
Q ss_pred HHHHHHHHHHCCCeEEEEECCchHH
Q 027731 3 IAREVASVTRLGIEVAIVVGGGNIF 27 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG~~~ 27 (219)
+.+.++.+++++.+=|.|.|||.+.
T Consensus 82 ~~~~l~~l~~~~~~~i~viGG~~l~ 106 (162)
T 1vdr_A 82 VEEAVDIAASLDAETAYVIGGAAIY 106 (162)
T ss_dssp HHHHHHHHHHTTCSCEEEEECHHHH
T ss_pred HHHHHHHHHhCCCCcEEEECCHHHH
Confidence 5566777777555557778777653
No 70
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=26.28 E-value=60 Score=23.76 Aligned_cols=22 Identities=23% Similarity=0.514 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHCCCeEEEEECC
Q 027731 2 AIAREVASVTRLGIEVAIVVGG 23 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~Gg 23 (219)
.+.+.++++.+++.++||.+||
T Consensus 57 ~I~~~l~~a~~~~~DlVittGG 78 (167)
T 2g2c_A 57 TVVEAIATALKQGARFIITAGG 78 (167)
T ss_dssp HHHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHHHhCCCCEEEECCC
Confidence 4667788877756899999976
No 71
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=26.22 E-value=1.7e+02 Score=21.42 Aligned_cols=9 Identities=56% Similarity=0.925 Sum_probs=7.3
Q ss_pred eccCccccC
Q 027731 132 TNVDGVYDD 140 (219)
Q Consensus 132 tDV~Gv~~~ 140 (219)
.|+||++..
T Consensus 24 fD~DGtL~~ 32 (191)
T 3n1u_A 24 CDVDGVLSD 32 (191)
T ss_dssp ECSTTTTBC
T ss_pred EeCCCCCCC
Confidence 499998865
No 72
>2p4g_A Hypothetical protein; pyrimidine reductase-like protein, structural genomics, JOIN for structural genomics, JCSG; 2.30A {Corynebacterium diphtheriae}
Probab=26.03 E-value=63 Score=25.69 Aligned_cols=11 Identities=27% Similarity=0.661 Sum_probs=4.8
Q ss_pred HHHHCCCeEEE
Q 027731 9 SVTRLGIEVAI 19 (219)
Q Consensus 9 ~l~~~g~~vvi 19 (219)
.+.+.|.+++.
T Consensus 158 ~l~~~gv~vi~ 168 (270)
T 2p4g_A 158 KLIDVGVEVIV 168 (270)
T ss_dssp HHHHHTCCEEE
T ss_pred HHHhCCCEEEE
Confidence 33344555444
No 73
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=25.95 E-value=57 Score=23.30 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=18.4
Q ss_pred HHHHHHHHHHCCCeEEEEECCc
Q 027731 3 IAREVASVTRLGIEVAIVVGGG 24 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG 24 (219)
+.+.|++|++.|+++.|++++.
T Consensus 32 ~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 32 SLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEEECT
T ss_pred HHHHHHHHHHCCCEEEEEECCC
Confidence 4567889999999999999654
No 74
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=25.68 E-value=1.9e+02 Score=21.01 Aligned_cols=65 Identities=9% Similarity=0.165 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhcCCCeeEecccccccccchHHHHHHHHHHh-CCCEEEEeCCCCCCccChHHHHHHHHHhcC
Q 027731 54 NAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLE-KGRVVIFAAGTGNPFFTTDTAAALRCAEIN 124 (219)
Q Consensus 54 ~~~l~~~~l~~~gi~a~~~~~~~~~~~~~~~~~~~~~~~l~-~g~ipIv~g~~g~~~~~sD~~Aa~lA~~l~ 124 (219)
|...+++.|++.|..+...... .|- + .+.+.+.++++ .-.+.|++| |.....-|.+...++..++
T Consensus 28 n~~~l~~~l~~~G~~v~~~~iv--~Dd-~-~i~~al~~a~~~~~DlVittG--G~s~g~~D~t~eal~~~~~ 93 (164)
T 3pzy_A 28 CGPIITEWLAQQGFSSAQPEVV--ADG-S-PVGEALRKAIDDDVDVILTSG--GTGIAPTDSTPDQTVAVVD 93 (164)
T ss_dssp HHHHHHHHHHHTTCEECCCEEE--CSS-H-HHHHHHHHHHHTTCSEEEEES--CCSSSTTCCHHHHHHTTCS
T ss_pred HHHHHHHHHHHCCCEEEEEEEe--CCH-H-HHHHHHHHHHhCCCCEEEECC--CCCCCCCccHHHHHHHHhc
Confidence 4455677888899876532111 121 1 22234456665 557888887 4556778888888887765
No 75
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=24.51 E-value=81 Score=23.25 Aligned_cols=21 Identities=24% Similarity=0.472 Sum_probs=16.9
Q ss_pred HHHHHHHHHHCCCeEEEEECC
Q 027731 3 IAREVASVTRLGIEVAIVVGG 23 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~Gg 23 (219)
+.+.++.|++.|+++.||+++
T Consensus 91 ~~~~l~~L~~~g~~~~i~T~~ 111 (225)
T 1nnl_A 91 IRELVSRLQERNVQVFLISGG 111 (225)
T ss_dssp HHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHCCCcEEEEeCC
Confidence 345678888899999999964
No 76
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=23.74 E-value=74 Score=23.44 Aligned_cols=22 Identities=27% Similarity=0.518 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHC-CCeEEEEECC
Q 027731 2 AIAREVASVTRL-GIEVAIVVGG 23 (219)
Q Consensus 2 ~la~~i~~l~~~-g~~vviV~Gg 23 (219)
.+.+.++++.++ +..+||++||
T Consensus 56 ~i~~~l~~a~~~~~~DlVittGG 78 (172)
T 1mkz_A 56 AIRAQVSAWIASDDVQVVLITGG 78 (172)
T ss_dssp HHHHHHHHHHHSSSCCEEEEESC
T ss_pred HHHHHHHHHHhcCCCCEEEeCCC
Confidence 466778888776 5899999976
No 77
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=23.49 E-value=94 Score=22.42 Aligned_cols=24 Identities=4% Similarity=0.340 Sum_probs=19.1
Q ss_pred HHHHHHHHHHCCCeEEEEECCchH
Q 027731 3 IAREVASVTRLGIEVAIVVGGGNI 26 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG~~ 26 (219)
+.+.|.+|++.|++++|+++++.+
T Consensus 47 ~~e~L~~L~~~G~~l~i~Tn~~~~ 70 (176)
T 2fpr_A 47 VIPQLLKLQKAGYKLVMITNQDGL 70 (176)
T ss_dssp HHHHHHHHHHTTEEEEEEEECTTT
T ss_pred HHHHHHHHHHCCCEEEEEECCccc
Confidence 456788899999999999976444
No 78
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=22.92 E-value=91 Score=20.04 Aligned_cols=24 Identities=17% Similarity=0.491 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHCCC-eEEEEECCch
Q 027731 2 AIAREVASVTRLGI-EVAIVVGGGN 25 (219)
Q Consensus 2 ~la~~i~~l~~~g~-~vviV~GgG~ 25 (219)
.+.+.|.++...|. .+.||||=|.
T Consensus 20 ~l~~fl~~a~~~g~~~v~IIHGkG~ 44 (83)
T 2zqe_A 20 EVDQALEEARALGLSTLRLLHGKGT 44 (83)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSTT
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCc
Confidence 35567777777775 7779998663
No 79
>3jtw_A Dihydrofolate reductase; YP_805003.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 1.90A {Pediococcus pentosaceus atcc 25745}
Probab=22.77 E-value=71 Score=23.52 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=17.6
Q ss_pred HHHHHHHHHHCCCeEEEEECCchHHH
Q 027731 3 IAREVASVTRLGIEVAIVVGGGNIFR 28 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG~~~~ 28 (219)
+.+.++.|++++.+=|+|.|||.+..
T Consensus 98 l~~~l~~l~~~~~~~i~v~GG~~l~~ 123 (178)
T 3jtw_A 98 PVELVKRIQKEKGKDVWIVGGAKIID 123 (178)
T ss_dssp HHHHHHHHHTSSCCEEEEEECHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEChHHHHH
Confidence 55667777777766777787665543
No 80
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=22.43 E-value=65 Score=26.56 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=18.2
Q ss_pred HHHHHHHHHCCCeEEEEECCch
Q 027731 4 AREVASVTRLGIEVAIVVGGGN 25 (219)
Q Consensus 4 a~~i~~l~~~g~~vviV~GgG~ 25 (219)
.+-+..|+++|+++.||++|+.
T Consensus 149 ~~l~~~l~~~G~~v~ivSas~~ 170 (327)
T 4as2_A 149 RELYNKLMENGIEVYVISAAHE 170 (327)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHHCCCEEEEEeCCcH
Confidence 4567788889999999998776
No 81
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=22.05 E-value=83 Score=22.86 Aligned_cols=21 Identities=24% Similarity=0.379 Sum_probs=17.7
Q ss_pred HHHHHHHHHHCCCeEEEEECC
Q 027731 3 IAREVASVTRLGIEVAIVVGG 23 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~Gg 23 (219)
+.+.+.+|++.|+++.|++++
T Consensus 39 ~~~~L~~L~~~g~~~~i~Tn~ 59 (189)
T 3ib6_A 39 AKETLEKVKQLGFKQAILSNT 59 (189)
T ss_dssp HHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 456788999999999999964
No 82
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=21.15 E-value=1.2e+02 Score=23.70 Aligned_cols=29 Identities=21% Similarity=0.203 Sum_probs=21.2
Q ss_pred HHHHHHHhCCCcEEEEecCCCchHHHHhc
Q 027731 170 TAITLCQENNIPVVVFNLNQPGNIAKAIQ 198 (219)
Q Consensus 170 ~aa~~a~~~gi~v~I~~g~~~~~i~~~l~ 198 (219)
++.+.+.+.|+++.++.|+.+..+..++.
T Consensus 28 ~al~~l~~~G~~~~iaTGR~~~~~~~~~~ 56 (288)
T 1nrw_A 28 NALRQAQRDGIEVVVSTGRAHFDVMSIFE 56 (288)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHG
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 44556677899988899988877766554
No 83
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=20.91 E-value=75 Score=24.13 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCCeEEEEECC
Q 027731 3 IAREVASVTRLGIEVAIVVGG 23 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~Gg 23 (219)
..+.|++|+++|+++++++|-
T Consensus 27 ~~~~l~~l~~~g~~~~i~TGr 47 (227)
T 1l6r_A 27 AIESIRSAEKKGLTVSLLSGN 47 (227)
T ss_dssp HHHHHHHHHHTTCEEEEECSS
T ss_pred HHHHHHHHHHCCCEEEEECCC
Confidence 456788999999999999964
No 84
>3dfr_A Dihydrofolate reductase; oxido-reductase; HET: NDP MTX; 1.70A {Lactobacillus casei} SCOP: c.71.1.1 PDB: 1ao8_A* 1bzf_A* 1dis_A* 1diu_A* 1lud_A* 2hm9_A* 2hqp_A* 2l28_A 2lf1_A*
Probab=20.36 E-value=55 Score=23.98 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=15.9
Q ss_pred HHHHHHHHHHCCCeEEEEECCchHH
Q 027731 3 IAREVASVTRLGIEVAIVVGGGNIF 27 (219)
Q Consensus 3 la~~i~~l~~~g~~vviV~GgG~~~ 27 (219)
+.+.++.+++++.+=|.|.|||.+.
T Consensus 79 ~~~~l~~lk~~~~~~i~viGG~~l~ 103 (162)
T 3dfr_A 79 VAAVFAYAKQHLDQELVIAGGAQIF 103 (162)
T ss_dssp HHHHHHHHHHCCSSCEEECCCHHHH
T ss_pred HHHHHHHHhcCCCCCEEEECCHHHH
Confidence 5567777777644445667776653
No 85
>1j3a_A 50S ribosomal protein L13P; rRNA binding, ribosomal assembly, ribosome; 1.60A {Pyrococcus horikoshii} SCOP: c.21.1.1
Probab=20.11 E-value=85 Score=22.67 Aligned_cols=20 Identities=40% Similarity=0.371 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHCCCeEEEEE
Q 027731 2 AIAREVASVTRLGIEVAIVV 21 (219)
Q Consensus 2 ~la~~i~~l~~~g~~vviV~ 21 (219)
++|.+|+.....|..||||-
T Consensus 13 RLAs~vAk~L~~Gd~VVViN 32 (142)
T 1j3a_A 13 RLASRVAKMLLEGEEVVIVN 32 (142)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHhcCCEEEEEe
Confidence 68999999888898888886
Done!