Query 027732
Match_columns 219
No_of_seqs 121 out of 439
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 00:37:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027732.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027732hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 2.8E-88 9.7E-93 581.1 22.5 209 6-216 6-214 (236)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 6.9E-88 2.4E-92 584.5 23.3 213 1-216 25-237 (261)
3 3uzd_A 14-3-3 protein gamma; s 100.0 8.8E-87 3E-91 575.1 23.3 208 7-216 3-212 (248)
4 1o9d_A 14-3-3-like protein C; 100.0 1.2E-85 4.2E-90 572.1 23.8 215 1-215 1-215 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 2.2E-85 7.5E-90 563.8 23.2 210 3-215 1-210 (234)
6 2npm_A 14-3-3 domain containin 100.0 6E-84 2E-88 561.2 20.6 209 6-215 26-235 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 5.4E-83 1.8E-87 555.2 15.2 203 7-215 28-237 (268)
8 2o8p_A 14-3-3 domain containin 100.0 3.5E-80 1.2E-84 527.2 21.1 190 7-208 2-198 (227)
9 3edt_B KLC 2, kinesin light ch 96.4 0.12 4.2E-06 40.8 14.0 155 10-208 45-199 (283)
10 3nf1_A KLC 1, kinesin light ch 95.7 0.65 2.2E-05 37.2 20.9 185 9-208 28-225 (311)
11 3vtx_A MAMA; tetratricopeptide 95.2 0.69 2.4E-05 34.8 17.6 161 9-206 6-169 (184)
12 3n71_A Histone lysine methyltr 94.9 0.15 5.3E-06 47.1 10.4 97 97-207 326-422 (490)
13 3u3w_A Transcriptional activat 94.8 1.5 5E-05 36.1 18.2 75 124-210 154-228 (293)
14 4a1s_A PINS, partner of inscut 94.6 1.8 6.2E-05 36.5 21.9 190 9-210 49-255 (411)
15 2qfc_A PLCR protein; TPR, HTH, 94.6 1.6 5.5E-05 35.9 17.0 151 9-208 76-226 (293)
16 3qww_A SET and MYND domain-con 94.3 0.27 9.2E-06 44.8 10.3 97 97-207 315-411 (433)
17 3qwp_A SET and MYND domain-con 94.1 0.15 5.2E-06 46.2 8.3 55 151-206 345-399 (429)
18 3edt_B KLC 2, kinesin light ch 93.9 0.61 2.1E-05 36.6 10.5 92 103-208 24-115 (283)
19 3sf4_A G-protein-signaling mod 93.8 2.5 8.7E-05 35.1 22.4 195 4-209 5-218 (406)
20 3ro2_A PINS homolog, G-protein 93.6 2.2 7.6E-05 34.0 20.9 189 9-209 6-214 (338)
21 3hym_B Cell division cycle pro 93.0 2.9 0.0001 33.6 15.4 47 151-206 252-298 (330)
22 3ro2_A PINS homolog, G-protein 93.0 2.8 9.7E-05 33.3 16.5 179 10-209 45-254 (338)
23 3u4t_A TPR repeat-containing p 93.0 2.7 9.3E-05 33.1 15.2 53 153-206 197-249 (272)
24 1fch_A Peroxisomal targeting s 92.9 3.1 0.0001 34.3 13.9 59 9-71 99-157 (368)
25 3q15_A PSP28, response regulat 92.4 0.58 2E-05 40.0 8.9 76 121-209 97-172 (378)
26 3ulq_A Response regulator aspa 92.4 1.4 4.6E-05 37.5 11.3 73 123-208 101-173 (383)
27 3qww_A SET and MYND domain-con 92.3 0.24 8.2E-06 45.1 6.6 55 152-207 315-369 (433)
28 4b4t_Q 26S proteasome regulato 91.7 5.6 0.00019 33.8 16.9 182 11-208 58-246 (434)
29 3n71_A Histone lysine methyltr 91.5 0.32 1.1E-05 44.9 6.6 56 152-208 326-381 (490)
30 4i17_A Hypothetical protein; T 91.4 4.1 0.00014 31.5 13.9 59 9-70 8-66 (228)
31 3qky_A Outer membrane assembly 90.8 5.2 0.00018 31.8 16.3 68 7-75 14-81 (261)
32 2gw1_A Mitochondrial precursor 90.3 8.1 0.00028 33.2 15.8 56 151-207 205-266 (514)
33 3ulq_A Response regulator aspa 90.1 7.8 0.00027 32.7 20.1 175 13-208 108-294 (383)
34 2xpi_A Anaphase-promoting comp 89.8 10 0.00035 33.6 18.4 48 151-207 532-579 (597)
35 4g1t_A Interferon-induced prot 89.8 9 0.00031 32.9 15.8 50 151-205 350-399 (472)
36 3ieg_A DNAJ homolog subfamily 89.7 6.9 0.00024 31.6 18.6 47 151-206 288-334 (359)
37 4eqf_A PEX5-related protein; a 89.6 7.8 0.00027 32.0 15.5 58 9-70 66-123 (365)
38 4abn_A Tetratricopeptide repea 89.5 11 0.00038 33.6 16.5 173 9-206 103-286 (474)
39 1fch_A Peroxisomal targeting s 89.4 8 0.00027 31.7 17.8 58 9-70 65-122 (368)
40 3qwp_A SET and MYND domain-con 89.3 0.35 1.2E-05 43.8 4.6 55 152-207 304-358 (429)
41 4gcn_A Protein STI-1; structur 89.2 1.1 3.9E-05 32.3 6.7 48 151-207 24-71 (127)
42 3ro3_A PINS homolog, G-protein 88.9 4.5 0.00015 28.3 10.3 54 152-208 66-119 (164)
43 2y4t_A DNAJ homolog subfamily 88.9 10 0.00034 32.2 16.8 58 11-72 146-203 (450)
44 2q7f_A YRRB protein; TPR, prot 88.7 6.6 0.00023 30.0 15.9 165 8-207 57-222 (243)
45 3ro3_A PINS homolog, G-protein 88.4 4.9 0.00017 28.1 15.2 149 10-208 11-159 (164)
46 2y4t_A DNAJ homolog subfamily 88.4 11 0.00036 32.0 16.5 170 9-206 178-357 (450)
47 2q7f_A YRRB protein; TPR, prot 88.2 7.1 0.00024 29.8 11.2 165 9-208 24-189 (243)
48 3sf4_A G-protein-signaling mod 88.2 9.9 0.00034 31.4 20.0 179 10-209 49-258 (406)
49 2pl2_A Hypothetical conserved 87.9 8.2 0.00028 30.1 13.0 44 9-55 6-49 (217)
50 4gyw_A UDP-N-acetylglucosamine 87.8 20 0.00069 34.4 16.7 169 8-212 9-179 (723)
51 3ieg_A DNAJ homolog subfamily 87.6 9.7 0.00033 30.6 17.2 169 12-207 124-301 (359)
52 3fp2_A TPR repeat-containing p 87.2 14 0.00048 32.0 17.0 48 151-207 444-491 (537)
53 3hym_B Cell division cycle pro 87.2 10 0.00034 30.3 16.5 57 151-208 209-266 (330)
54 3cv0_A Peroxisome targeting si 86.6 11 0.00037 30.1 15.5 44 9-55 22-65 (327)
55 2gw1_A Mitochondrial precursor 86.2 15 0.00052 31.4 15.1 48 151-207 431-478 (514)
56 2xpi_A Anaphase-promoting comp 86.0 18 0.00061 32.0 18.1 54 151-207 491-545 (597)
57 4eqf_A PEX5-related protein; a 85.3 14 0.00049 30.4 16.4 58 9-70 100-157 (365)
58 3uq3_A Heat shock protein STI1 85.2 11 0.00037 28.8 15.5 29 10-38 40-68 (258)
59 2ho1_A Type 4 fimbrial biogene 85.1 11 0.00039 29.0 15.5 57 10-70 39-95 (252)
60 2pl2_A Hypothetical conserved 85.0 12 0.00041 29.1 17.4 46 9-57 40-85 (217)
61 3rkv_A Putative peptidylprolyl 85.0 0.87 3E-05 33.8 4.0 56 151-207 27-92 (162)
62 2ifu_A Gamma-SNAP; membrane fu 84.8 15 0.00052 30.2 12.5 52 151-205 171-222 (307)
63 4a1s_A PINS, partner of inscut 84.2 17 0.00059 30.3 18.7 178 10-209 88-294 (411)
64 2ifu_A Gamma-SNAP; membrane fu 83.2 18 0.00061 29.8 14.7 55 151-209 131-186 (307)
65 4gco_A Protein STI-1; structur 83.1 3.8 0.00013 29.5 6.7 46 152-206 30-75 (126)
66 3cv0_A Peroxisome targeting si 81.7 18 0.00061 28.7 15.4 44 9-55 56-99 (327)
67 3lf9_A 4E10_D0_1IS1A_001_C (T1 81.4 8 0.00027 29.3 7.9 86 22-114 11-103 (121)
68 4g1t_A Interferon-induced prot 81.2 3.5 0.00012 35.6 6.8 54 151-205 67-121 (472)
69 4gcn_A Protein STI-1; structur 81.0 4.4 0.00015 29.1 6.4 54 151-206 58-111 (127)
70 1xnf_A Lipoprotein NLPI; TPR, 80.9 17 0.0006 28.1 12.9 56 10-69 45-100 (275)
71 3u3w_A Transcriptional activat 80.8 18 0.0006 29.4 10.8 89 105-207 93-184 (293)
72 1qqe_A Vesicular transport pro 80.3 22 0.00076 28.9 14.6 53 151-207 134-187 (292)
73 1elr_A TPR2A-domain of HOP; HO 80.3 4.8 0.00017 27.2 6.2 55 151-207 54-108 (131)
74 2vq2_A PILW, putative fimbrial 79.6 17 0.00057 27.1 16.7 58 9-70 9-66 (225)
75 2xev_A YBGF; tetratricopeptide 79.6 12 0.00042 25.5 13.6 28 11-38 5-32 (129)
76 3sz7_A HSC70 cochaperone (SGT) 79.0 5.5 0.00019 29.3 6.6 47 152-207 62-108 (164)
77 3uq3_A Heat shock protein STI1 78.1 20 0.0007 27.2 15.9 49 151-208 189-237 (258)
78 2l6j_A TPR repeat-containing p 78.1 7.5 0.00026 25.8 6.6 46 152-206 21-66 (111)
79 1na3_A Designed protein CTPR2; 77.6 5.6 0.00019 25.5 5.6 48 151-207 25-72 (91)
80 3qky_A Outer membrane assembly 76.9 25 0.00086 27.6 11.8 62 12-73 152-222 (261)
81 1elr_A TPR2A-domain of HOP; HO 76.7 9.9 0.00034 25.6 7.0 51 151-210 20-70 (131)
82 3nf1_A KLC 1, kinesin light ch 76.4 26 0.00088 27.5 20.5 183 10-207 71-307 (311)
83 3k9i_A BH0479 protein; putativ 76.2 9.2 0.00032 26.4 6.8 48 151-207 43-90 (117)
84 3ma5_A Tetratricopeptide repea 76.1 11 0.00036 25.6 7.0 49 151-208 23-71 (100)
85 2dba_A Smooth muscle cell asso 76.0 3.6 0.00012 28.9 4.6 24 181-205 103-126 (148)
86 3upv_A Heat shock protein STI1 75.9 17 0.00057 25.1 11.5 30 9-38 5-34 (126)
87 3fp2_A TPR repeat-containing p 75.6 39 0.0013 29.1 18.5 55 153-207 213-272 (537)
88 2kck_A TPR repeat; tetratricop 75.4 11 0.00038 24.6 6.8 47 152-207 23-69 (112)
89 1qqe_A Vesicular transport pro 75.2 32 0.0011 28.0 12.8 29 10-38 39-67 (292)
90 1w3b_A UDP-N-acetylglucosamine 74.2 36 0.0012 28.2 12.8 29 10-38 103-131 (388)
91 1xi4_A Clathrin heavy chain; a 73.7 20 0.00069 37.9 10.8 24 182-205 1284-1307(1630)
92 2kc7_A BFR218_protein; tetratr 73.5 14 0.00047 24.3 6.9 47 152-207 17-64 (99)
93 1xnf_A Lipoprotein NLPI; TPR, 72.5 22 0.00076 27.5 8.9 47 151-206 93-139 (275)
94 1a17_A Serine/threonine protei 72.0 6.5 0.00022 28.1 5.2 47 152-207 64-110 (166)
95 3gw4_A Uncharacterized protein 71.0 28 0.00097 25.5 11.3 74 122-208 63-137 (203)
96 2fbn_A 70 kDa peptidylprolyl i 70.8 31 0.0011 25.9 12.4 29 10-38 40-68 (198)
97 3upv_A Heat shock protein STI1 69.6 10 0.00034 26.3 5.6 15 191-205 51-65 (126)
98 3q49_B STIP1 homology and U bo 69.5 9.9 0.00034 26.4 5.6 25 181-206 81-105 (137)
99 2yhc_A BAMD, UPF0169 lipoprote 69.5 37 0.0013 26.2 19.9 64 9-73 5-68 (225)
100 2e2e_A Formate-dependent nitri 69.4 30 0.001 25.2 12.6 45 153-206 99-143 (177)
101 2hr2_A Hypothetical protein; a 69.3 17 0.00057 28.5 7.3 54 151-206 27-85 (159)
102 4gco_A Protein STI-1; structur 69.0 16 0.00054 26.0 6.7 47 151-206 63-109 (126)
103 2lni_A Stress-induced-phosphop 69.0 17 0.0006 24.5 6.7 47 152-207 67-113 (133)
104 3as5_A MAMA; tetratricopeptide 68.8 28 0.00096 24.7 16.2 165 9-208 9-174 (186)
105 3k9i_A BH0479 protein; putativ 68.4 3.6 0.00012 28.7 2.9 49 153-207 8-56 (117)
106 2vyi_A SGTA protein; chaperone 68.3 12 0.0004 25.1 5.6 25 181-206 84-108 (131)
107 1elw_A TPR1-domain of HOP; HOP 67.9 12 0.00043 24.5 5.6 27 179-206 74-100 (118)
108 2v5f_A Prolyl 4-hydroxylase su 67.7 27 0.00093 24.0 7.7 54 152-207 22-75 (104)
109 3q15_A PSP28, response regulat 67.1 55 0.0019 27.3 20.8 53 151-207 238-290 (378)
110 3vtx_A MAMA; tetratricopeptide 67.0 9.3 0.00032 28.2 5.2 48 151-207 21-68 (184)
111 1na0_A Designed protein CTPR3; 66.3 14 0.00047 24.5 5.6 26 180-206 80-105 (125)
112 2kat_A Uncharacterized protein 65.4 27 0.00091 23.6 7.1 48 151-207 35-82 (115)
113 1elw_A TPR1-domain of HOP; HOP 64.5 21 0.0007 23.3 6.2 29 10-38 6-34 (118)
114 2ho1_A Type 4 fimbrial biogene 64.4 45 0.0015 25.4 16.4 60 9-72 72-131 (252)
115 4ga2_A E3 SUMO-protein ligase 63.7 14 0.00047 27.1 5.6 47 152-207 48-94 (150)
116 3gw4_A Uncharacterized protein 63.7 41 0.0014 24.6 17.3 74 123-209 105-178 (203)
117 2vyi_A SGTA protein; chaperone 63.5 26 0.00091 23.2 6.7 26 12-37 16-41 (131)
118 2vgx_A Chaperone SYCD; alterna 63.5 21 0.00072 26.1 6.6 47 152-207 72-118 (148)
119 1w3b_A UDP-N-acetylglucosamine 63.3 63 0.0021 26.7 15.0 44 9-55 68-111 (388)
120 3bee_A Putative YFRE protein; 62.8 9 0.00031 26.6 4.1 30 9-38 44-73 (93)
121 1a17_A Serine/threonine protei 61.6 27 0.00091 24.6 6.7 30 9-38 14-43 (166)
122 2qfc_A PLCR protein; TPR, HTH, 61.4 24 0.00083 28.5 7.2 52 151-205 212-264 (293)
123 4gyw_A UDP-N-acetylglucosamine 61.3 1.2E+02 0.0039 29.1 16.9 46 9-57 44-89 (723)
124 1na0_A Designed protein CTPR3; 60.7 20 0.00068 23.6 5.6 27 11-37 12-38 (125)
125 1ihg_A Cyclophilin 40; ppiase 60.6 8.7 0.0003 33.4 4.5 54 152-206 240-301 (370)
126 2fbn_A 70 kDa peptidylprolyl i 60.5 16 0.00054 27.6 5.6 24 181-205 126-149 (198)
127 2dba_A Smooth muscle cell asso 60.5 30 0.001 23.8 6.8 28 10-37 30-57 (148)
128 2xcb_A PCRH, regulatory protei 60.2 28 0.00096 24.7 6.7 48 151-207 68-115 (142)
129 3urz_A Uncharacterized protein 60.1 16 0.00055 28.1 5.6 31 8-38 4-34 (208)
130 3rkv_A Putative peptidylprolyl 59.8 46 0.0016 24.0 10.1 46 152-206 80-125 (162)
131 3q49_B STIP1 homology and U bo 59.3 33 0.0011 23.5 6.7 24 12-35 13-36 (137)
132 3gyz_A Chaperone protein IPGC; 59.1 20 0.00069 26.9 5.9 47 151-206 86-132 (151)
133 4gfq_A Ribosome-recycling fact 58.5 21 0.00071 29.5 6.1 69 41-114 127-199 (209)
134 1p5q_A FKBP52, FK506-binding p 57.9 82 0.0028 26.3 11.8 29 10-38 149-177 (336)
135 3u4t_A TPR repeat-containing p 57.8 62 0.0021 24.9 13.2 49 151-208 158-209 (272)
136 2lni_A Stress-induced-phosphop 57.2 9.9 0.00034 25.8 3.5 47 152-207 33-79 (133)
137 1hz4_A MALT regulatory protein 57.0 80 0.0028 25.9 18.2 56 152-208 110-165 (373)
138 4abn_A Tetratricopeptide repea 56.9 1E+02 0.0035 27.1 16.5 46 9-58 138-183 (474)
139 1hh8_A P67PHOX, NCF-2, neutrop 55.4 35 0.0012 25.5 6.7 47 151-206 53-99 (213)
140 3as5_A MAMA; tetratricopeptide 55.4 24 0.00083 25.0 5.6 48 152-208 93-140 (186)
141 1ge9_A Ribosome recycling fact 54.2 45 0.0016 26.8 7.4 70 41-114 105-174 (184)
142 3ma5_A Tetratricopeptide repea 54.0 46 0.0016 22.2 10.4 57 9-69 8-64 (100)
143 2hr2_A Hypothetical protein; a 54.0 22 0.00076 27.7 5.4 54 152-206 74-130 (159)
144 1lyp_A CAP18; lipopolysacchari 53.9 27 0.00094 19.6 4.6 27 86-112 4-30 (32)
145 4ga2_A E3 SUMO-protein ligase 53.6 38 0.0013 24.6 6.5 28 11-38 34-61 (150)
146 1ya0_A SMG-7 transcript varian 53.5 46 0.0016 30.6 8.3 26 130-165 157-182 (497)
147 1p5q_A FKBP52, FK506-binding p 53.4 6.6 0.00022 33.4 2.4 55 151-206 163-224 (336)
148 2kat_A Uncharacterized protein 53.4 48 0.0016 22.2 11.5 59 8-70 19-77 (115)
149 1kt0_A FKBP51, 51 kDa FK506-bi 53.1 14 0.00046 32.9 4.5 54 151-206 284-345 (457)
150 2fo7_A Synthetic consensus TPR 51.9 27 0.00092 23.1 5.1 25 13-37 6-30 (136)
151 1wao_1 Serine/threonine protei 51.9 31 0.0011 30.9 6.7 27 179-206 76-102 (477)
152 2vgx_A Chaperone SYCD; alterna 51.2 31 0.0011 25.1 5.7 47 152-207 38-84 (148)
153 1dd5_A Ribosome recycling fact 50.9 35 0.0012 27.5 6.2 69 41-114 103-175 (185)
154 1zu2_A Mitochondrial import re 49.7 44 0.0015 26.0 6.5 70 131-205 42-118 (158)
155 1ise_A Ribosome recycling fact 49.1 37 0.0012 27.4 6.1 69 41-114 103-175 (185)
156 1is1_A Ribosome recycling fact 48.5 38 0.0013 27.3 6.1 69 41-114 103-175 (185)
157 2c2l_A CHIP, carboxy terminus 48.1 31 0.0011 28.1 5.7 49 156-208 52-102 (281)
158 2w2u_A Hypothetical P60 katani 47.5 12 0.00043 26.1 2.7 27 10-36 21-47 (83)
159 2ond_A Cleavage stimulation fa 47.3 1.1E+02 0.0038 24.7 16.2 52 151-207 219-270 (308)
160 1wqg_A Ribosome recycling fact 47.1 41 0.0014 27.0 6.1 69 41-114 103-175 (185)
161 1hxi_A PEX5, peroxisome target 46.4 42 0.0014 23.4 5.6 14 191-204 64-77 (121)
162 1eh1_A Ribosome recycling fact 46.0 36 0.0012 27.4 5.6 73 41-114 104-176 (185)
163 2ond_A Cleavage stimulation fa 45.7 96 0.0033 25.1 8.4 48 151-206 115-162 (308)
164 3sz7_A HSC70 cochaperone (SGT) 45.4 82 0.0028 22.6 11.3 29 10-38 13-41 (164)
165 1hh8_A P67PHOX, NCF-2, neutrop 43.3 39 0.0013 25.2 5.2 55 151-206 87-149 (213)
166 4a5x_A MITD1, MIT domain-conta 43.2 54 0.0018 22.8 5.5 34 3-36 11-44 (86)
167 2xev_A YBGF; tetratricopeptide 43.2 72 0.0025 21.3 9.5 63 9-72 40-102 (129)
168 3gyz_A Chaperone protein IPGC; 40.1 1.1E+02 0.0038 22.6 9.5 45 9-56 37-81 (151)
169 1hxi_A PEX5, peroxisome target 40.1 91 0.0031 21.6 6.6 59 9-71 18-76 (121)
170 2e2e_A Formate-dependent nitri 39.4 60 0.002 23.5 5.7 49 151-207 60-110 (177)
171 2r5s_A Uncharacterized protein 39.0 77 0.0026 23.2 6.3 33 9-43 109-141 (176)
172 2ooe_A Cleavage stimulation fa 38.0 58 0.002 28.8 6.2 52 151-211 62-113 (530)
173 2wh5_A Acyl-COA-binding domain 37.0 47 0.0016 24.3 4.5 37 22-59 10-46 (106)
174 2kc7_A BFR218_protein; tetratr 36.9 82 0.0028 20.2 5.9 28 11-38 3-30 (99)
175 2h6f_A Protein farnesyltransfe 36.2 2.1E+02 0.0071 24.6 15.3 57 9-69 98-155 (382)
176 2l6j_A TPR repeat-containing p 35.9 50 0.0017 21.4 4.4 26 11-36 7-32 (111)
177 2kck_A TPR repeat; tetratricop 35.7 84 0.0029 19.9 8.0 25 13-37 11-35 (112)
178 1wao_1 Serine/threonine protei 34.4 67 0.0023 28.6 6.1 14 22-35 20-33 (477)
179 2h6f_A Protein farnesyltransfe 34.0 2.3E+02 0.0077 24.4 14.9 48 10-60 202-249 (382)
180 2ooe_A Cleavage stimulation fa 33.8 88 0.003 27.5 6.7 19 188-206 401-419 (530)
181 3caz_A BAR protein; thermo-aci 33.7 2E+02 0.0067 23.6 11.9 111 14-167 100-210 (294)
182 3mkr_A Coatomer subunit epsilo 33.4 68 0.0023 26.2 5.6 47 152-207 183-229 (291)
183 2vsy_A XCC0866; transferase, g 33.4 2.5E+02 0.0087 24.8 16.5 30 9-38 24-53 (568)
184 4h7y_A Dual specificity protei 30.7 93 0.0032 24.5 5.5 75 117-205 9-87 (161)
185 2wb7_A PT26-6P; extra chromoso 30.7 1.7E+02 0.0058 27.3 8.0 64 139-204 436-513 (526)
186 1zu2_A Mitochondrial import re 30.1 94 0.0032 24.0 5.5 22 143-164 10-31 (158)
187 2if4_A ATFKBP42; FKBP-like, al 29.9 49 0.0017 27.8 4.2 28 178-206 231-258 (338)
188 1na3_A Designed protein CTPR2; 29.5 1E+02 0.0035 19.0 6.6 60 9-72 10-69 (91)
189 3kfu_G Glutamyl-tRNA(Gln) amid 29.1 83 0.0028 22.1 4.6 18 1-18 1-18 (92)
190 2w9y_A CE-FAR-7, fatty acid/re 28.9 1.3E+02 0.0044 23.2 5.9 75 97-174 60-136 (140)
191 4etr_A Putative uncharacterize 28.4 1.4E+02 0.0046 22.6 6.1 18 151-171 108-125 (153)
192 3u64_A Protein TP_0956; tetrat 28.0 74 0.0025 27.6 4.9 63 131-206 205-268 (301)
193 2c2l_A CHIP, carboxy terminus 27.6 80 0.0028 25.5 5.0 30 9-38 5-34 (281)
194 3iyk_A VP5; icosahedral virus; 26.5 3E+02 0.01 25.6 8.8 73 22-96 121-199 (526)
195 2vsy_A XCC0866; transferase, g 25.8 98 0.0033 27.6 5.6 18 21-38 2-19 (568)
196 2xcb_A PCRH, regulatory protei 25.0 1.8E+02 0.006 20.2 10.3 29 10-38 20-48 (142)
197 3cjl_A Domain of unknown funct 25.0 43 0.0015 23.8 2.4 34 21-57 24-57 (88)
198 4i17_A Hypothetical protein; T 24.6 2.2E+02 0.0075 21.2 14.8 58 9-70 43-100 (228)
199 3dlq_I Interleukin-22; cytokin 24.3 54 0.0019 25.5 3.1 16 203-218 130-145 (151)
200 2g0u_A Type III secretion syst 24.1 25 0.00087 25.3 1.0 53 132-188 12-68 (92)
201 1ihg_A Cyclophilin 40; ppiase 24.0 1.2E+02 0.0042 25.9 5.7 47 152-207 290-336 (370)
202 2yhc_A BAMD, UPF0169 lipoprote 23.7 2.4E+02 0.0082 21.3 11.0 47 9-57 42-90 (225)
203 2v6y_A AAA family ATPase, P60 22.7 1.1E+02 0.0036 21.0 4.1 27 10-36 13-39 (83)
204 3onj_A T-snare VTI1; helix, HA 22.2 2.1E+02 0.0071 20.1 8.8 78 24-104 10-90 (97)
205 3urz_A Uncharacterized protein 22.1 2.5E+02 0.0086 21.0 13.8 39 14-55 60-98 (208)
206 2vq2_A PILW, putative fimbrial 21.9 2.3E+02 0.0078 20.4 17.0 62 9-73 43-104 (225)
207 1wfd_A Hypothetical protein 15 21.3 79 0.0027 22.2 3.2 29 8-36 15-43 (93)
208 3qou_A Protein YBBN; thioredox 21.2 2.1E+02 0.0072 22.9 6.4 30 9-38 220-249 (287)
209 2r5s_A Uncharacterized protein 21.1 2.2E+02 0.0074 20.5 6.0 58 8-69 6-63 (176)
210 1tdp_A Carnobacteriocin B2 imm 20.4 2.6E+02 0.0089 20.6 5.9 67 48-132 9-82 (111)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=2.8e-88 Score=581.14 Aligned_cols=209 Identities=56% Similarity=0.835 Sum_probs=204.8
Q ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhH
Q 027732 6 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 85 (219)
Q Consensus 6 ~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~ 85 (219)
.+|+++||+|||||||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|++.++
T Consensus 6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~--~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~ 83 (236)
T 3iqu_A 6 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKG--EELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKG 83 (236)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCC
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHH
Confidence 379999999999999999999999999999998 999999999999999999999999999999999999888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 027732 86 SVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIA 165 (219)
Q Consensus 86 ~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 165 (219)
+.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus 84 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA 163 (236)
T 3iqu_A 84 PEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDIS 163 (236)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhhh
Q 027732 166 LAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFL 216 (219)
Q Consensus 166 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~~ 216 (219)
+++|||||||||||+||||||||||+|+|++||++||+|||+||++||+|-
T Consensus 164 ~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~ 214 (236)
T 3iqu_A 164 KKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLS 214 (236)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSC
T ss_pred HhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 989999999999999999999999999999999999999999999999873
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=6.9e-88 Score=584.47 Aligned_cols=213 Identities=70% Similarity=1.036 Sum_probs=204.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcC
Q 027732 1 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (219)
Q Consensus 1 ~~~m~~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~ 80 (219)
|++|+ +|+++||+|||+|||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|
T Consensus 25 ~~~m~-~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~--~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g 101 (261)
T 3ubw_A 25 MGSMD-DREDLVYQAKLAEQAERYDEMVESMKKVAGMD--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKG 101 (261)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhhhh-hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--CcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccc
Confidence 56665 79999999999999999999999999999998 9999999999999999999999999999999999998888
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHH
Q 027732 81 NEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKS 160 (219)
Q Consensus 81 ~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 160 (219)
++.+++.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|+++|++
T Consensus 102 ~~~~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~ 181 (261)
T 3ubw_A 102 GEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKA 181 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhhh
Q 027732 161 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFL 216 (219)
Q Consensus 161 A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~~ 216 (219)
|+++|+++|||||||||||+||||||||||+|+|++||+|||+|||+||++||+|-
T Consensus 182 A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~ 237 (261)
T 3ubw_A 182 ASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLS 237 (261)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCC
T ss_pred HHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999989999999999999999999999999999999999999999999999973
No 3
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=8.8e-87 Score=575.14 Aligned_cols=208 Identities=56% Similarity=0.870 Sum_probs=200.8
Q ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHH
Q 027732 7 SREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVS 86 (219)
Q Consensus 7 ~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~ 86 (219)
+|+++||+|||+|||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|++.+++
T Consensus 3 ~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~--~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~ 80 (248)
T 3uzd_A 3 DREQLVQKARLAEQAERYDDMAAAMKNVTELN--EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIE 80 (248)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHH
Confidence 79999999999999999999999999999998 9999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCc--hhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHH
Q 027732 87 VIKEYRSKIENELSKICDGILSLLESHLIPSASSA--ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDI 164 (219)
Q Consensus 87 ~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~--eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 164 (219)
.+++||++|++||..+|++|+++||++|||+++++ |++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 81 ~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~i 160 (248)
T 3uzd_A 81 MVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEI 160 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhhh
Q 027732 165 ALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFFL 216 (219)
Q Consensus 165 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~~ 216 (219)
|+++|||||||||||+||||||||||+|+|++||.|||+|||+||++||+|-
T Consensus 161 A~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~ 212 (248)
T 3uzd_A 161 SKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLN 212 (248)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCC
T ss_pred HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9989999999999999999999999999999999999999999999999873
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=1.2e-85 Score=572.11 Aligned_cols=215 Identities=83% Similarity=1.173 Sum_probs=205.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcC
Q 027732 1 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (219)
Q Consensus 1 ~~~m~~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~ 80 (219)
|+.|+++|+++||+|||++||||||||+++||++++.+.+++||.||||||||||||+||++|+|||+|+++||+++.+|
T Consensus 1 ~~~~~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~ 80 (260)
T 1o9d_A 1 MAVAPTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (260)
T ss_dssp ----CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCcccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccC
Confidence 78888899999999999999999999999999999875336999999999999999999999999999999999998888
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHH
Q 027732 81 NEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKS 160 (219)
Q Consensus 81 ~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 160 (219)
++.+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++
T Consensus 81 ~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~ 160 (260)
T 1o9d_A 81 NEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKA 160 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhh
Q 027732 161 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFF 215 (219)
Q Consensus 161 A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~ 215 (219)
|+++|+++|||||||||||+||||||||||+|+|++||.|||+|||+||++||+|
T Consensus 161 A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L 215 (260)
T 1o9d_A 161 AQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTL 215 (260)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999998999999999999999999999999999999999999999999999987
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=2.2e-85 Score=563.80 Aligned_cols=210 Identities=71% Similarity=1.047 Sum_probs=203.6
Q ss_pred CCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCc
Q 027732 3 PTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 82 (219)
Q Consensus 3 ~m~~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~ 82 (219)
+|+ +|++++|+|||++||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|++
T Consensus 1 ~m~-~re~~v~~AklaeqaeRyddm~~~mk~v~~~~--~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~ 77 (234)
T 2br9_A 1 SMD-DREDLVYQAKLAEQAERYDEMVESMKKVAGMD--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGE 77 (234)
T ss_dssp ----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred Ccc-hHHHHHHHHHHHHHHhCHHHHHHHHHHHhccc--CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCch
Confidence 354 69999999999999999999999999999988 999999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHH
Q 027732 83 DHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQ 162 (219)
Q Consensus 83 ~~~~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 162 (219)
.+++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+
T Consensus 78 ~~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 157 (234)
T 2br9_A 78 DKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAAS 157 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhh
Q 027732 163 DIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFF 215 (219)
Q Consensus 163 ~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~ 215 (219)
++|+++||||||+||||+||||||||||+|+|++||+|||+|||+||++||+|
T Consensus 158 ~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l 210 (234)
T 2br9_A 158 DIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTL 210 (234)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGC
T ss_pred HHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 99998999999999999999999999999999999999999999999999986
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=6e-84 Score=561.17 Aligned_cols=209 Identities=61% Similarity=0.956 Sum_probs=201.5
Q ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchh
Q 027732 6 SSREENVYMAKLAEQAERYEEMVEFMEKVAKTV-DVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (219)
Q Consensus 6 ~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~-~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~ 84 (219)
++|+++||+|||+|||||||||+++||++++.+ ..++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~ 105 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDA 105 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHH
Confidence 469999999999999999999999999999863 1168999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHH
Q 027732 85 VSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDI 164 (219)
Q Consensus 85 ~~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 164 (219)
++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 106 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 185 (260)
T 2npm_A 106 SKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVV 185 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhhhhh
Q 027732 165 ALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFLSFF 215 (219)
Q Consensus 165 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ld~~ 215 (219)
| ++||||||+||||+||||||||||+|+|++||+|||+|||+||++||+|
T Consensus 186 A-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L 235 (260)
T 2npm_A 186 A-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKL 235 (260)
T ss_dssp H-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGC
T ss_pred H-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcC
Confidence 9 8999999999999999999999999999999999999999999999987
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=5.4e-83 Score=555.21 Aligned_cols=203 Identities=22% Similarity=0.388 Sum_probs=174.4
Q ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhh-hhcCC-chh
Q 027732 7 SREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ESRGN-EDH 84 (219)
Q Consensus 7 ~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~-~~~~~-~~~ 84 (219)
+|+++||+|||+|||||||||+++| ++.+ ++||.||||||||||||+||++|+|||+|+++||++ +.+|+ +.+
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~--~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~ 102 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESS--DFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEF 102 (268)
T ss_dssp ------------------CHHHHHH---TC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcC--CcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHH
Confidence 5999999999999999999999999 7777 999999999999999999999999999999999999 78887 889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHH
Q 027732 85 VSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDI 164 (219)
Q Consensus 85 ~~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 164 (219)
++.+++||++|++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 103 ~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~ei 181 (268)
T 3efz_A 103 IQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQR 181 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHhcC--CCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhhhh
Q 027732 165 ALAEL--APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA---ALLFLSFF 215 (219)
Q Consensus 165 a~~~L--~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~---Ai~~ld~~ 215 (219)
|+++| |||||||||||||||||||||+|+|++||++||+|||+ ||++||+|
T Consensus 182 A~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L 237 (268)
T 3efz_A 182 ERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQF 237 (268)
T ss_dssp HHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CC
T ss_pred HHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccC
Confidence 99899 99999999999999999999999999999999999999 99999987
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=3.5e-80 Score=527.25 Aligned_cols=190 Identities=21% Similarity=0.265 Sum_probs=183.8
Q ss_pred cHHHHH---HHHHHHHHhCCHHHHHHHHHHHHh----cCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhc
Q 027732 7 SREENV---YMAKLAEQAERYEEMVEFMEKVAK----TVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESR 79 (219)
Q Consensus 7 ~r~~li---~~AklaeqaeRy~dm~~~mk~~i~----~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~ 79 (219)
+|+++| |+|||+|||||||||+++||++++ .+ ++||.||||||||||||+||++|+|||+|+++||++ +
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~--~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k 77 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFEN--SEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--L 77 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--C
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccC--CCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--c
Confidence 588999 999999999999999999999999 78 899999999999999999999999999999999998 6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHH
Q 027732 80 GNEDHVSVIKEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYK 159 (219)
Q Consensus 80 ~~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 159 (219)
|++.+++.+++||++|++||..+|++|+++||++|||++ |++|||+|||||||||+|||..|+ +++|+++|+
T Consensus 78 ~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~ 149 (227)
T 2o8p_A 78 NNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQ 149 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHH
Confidence 788899999999999999999999999999999999997 999999999999999999999998 889999999
Q ss_pred HHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 160 SAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 160 ~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
+|+++|+++||||||+||||+||||||||||+|+|++||.+||+|||.+
T Consensus 150 ~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 150 DAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 9999999899999999999999999999999999999999999999943
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.37 E-value=0.12 Score=40.80 Aligned_cols=155 Identities=17% Similarity=0.175 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHHH
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIK 89 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~ 89 (219)
-+..+|.+....|+|++++.++.++++.. .............++.++.. +-.. .|+ ..+.
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~~~l~~-----------~~~~---~g~--~~~A-- 104 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIR--EKTLGKDHPAVAATLNNLAV-----------LYGK---RGK--YKEA-- 104 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH--HHHTCTTCHHHHHHHHHHHH-----------HHHT---TTC--HHHH--
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHH--HHHcCCcchHHHHHHHHHHH-----------HHHH---hcc--HHHH--
Confidence 34567888888899999999998887652 10000000111222222111 1110 111 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 027732 90 EYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAEL 169 (219)
Q Consensus 90 ~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L 169 (219)
...+...+.+.....-|. ....+..+...|..|..+-. .+.|...|++|+++.+...
T Consensus 105 ----------~~~~~~al~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~----------~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 105 ----------EPLCKRALEIREKVLGKF---HPDVAKQLNNLALLCQNQGK----------AEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp ----------HHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTTTC----------HHHHHHHHHHHHHHHHHHS
T ss_pred ----------HHHHHHHHHHHHHHcCCC---ChHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhc
Confidence 223333444443333221 12334444555665544322 4578999999999998888
Q ss_pred CCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 170 APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 170 ~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
++.+|.......|.+..++. .|+.++|....++++.-+
T Consensus 162 ~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 162 GPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRA 199 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 88999888888888888776 799999999999988754
No 10
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.65 E-value=0.65 Score=37.22 Aligned_cols=185 Identities=15% Similarity=0.144 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhh-hh--cC
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVD-----VEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ES--RG 80 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~-----~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~-~~--~~ 80 (219)
+-+..++.+....|+|++++.+++++++... ..+....-...+..+|-. .+....+...+....... .. ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4567888999999999999999999886410 022222223334444322 233333443332211110 00 00
Q ss_pred CchhH----HHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHH
Q 027732 81 NEDHV----SVIKEYR-SKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTL 155 (219)
Q Consensus 81 ~~~~~----~~i~~y~-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~ 155 (219)
.+... ....-|. ..=-++-...+...+.+.....-+. ....+..+-..|..|...- + .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~~-----~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQG-----K-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTTT-----C-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHcC-----C-----HHHHH
Confidence 01000 0000010 0011223334444444443322111 1223333444455443221 1 45789
Q ss_pred HHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 156 LAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 156 ~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
+.|++|+++.+...++.+|.......+.+..++. .|+.++|....+++++-+
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 9999999999887888899888888888888776 799999999999998754
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.22 E-value=0.69 Score=34.76 Aligned_cols=161 Identities=12% Similarity=0.055 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHH--
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVS-- 86 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~-- 86 (219)
.-...++.+..+-|+|++++++.+++++.+ |. +.+=...+..+|-. .+....+...+....... .+.....
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~---~~~~~~~~~ 78 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKAD--PN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLD---TTSAEAYYI 78 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC---CCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcC---chhHHHHHH
Confidence 345678999999999999999999999887 54 34555566666544 344444444443322221 1111110
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 027732 87 VIKEYRS-KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIA 165 (219)
Q Consensus 87 ~i~~y~~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 165 (219)
...-+.. .-.++-...+...+. +-|.. ...+...|..|.-+- + -+.|.+.|++++++
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~-----~~~~~------~~~~~~lg~~~~~~g-----~-----~~~A~~~~~~~l~~- 136 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIA-----LNTVY------ADAYYKLGLVYDSMG-----E-----HDKAIEAYEKTISI- 136 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH-----HCTTC------HHHHHHHHHHHHHTT-----C-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH-----hCccc------hHHHHHHHHHHHHhC-----C-----chhHHHHHHHHHHh-
Confidence 0000000 000111112222221 12321 112233454443221 1 35688889888764
Q ss_pred HhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 166 LAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 166 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.|.+| ....|.+..|+. +|+.++|+..-++|++
T Consensus 137 ----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 137 ----KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp ----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ----cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 34444 445566666665 8999999988888765
No 12
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.89 E-value=0.15 Score=47.12 Aligned_cols=97 Identities=10% Similarity=0.051 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 027732 97 NELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIR 176 (219)
Q Consensus 97 ~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 176 (219)
+|-..+|...+.+-.+.|=|.. + ..+=-+.-.|..|+..-. -+.|...|++|+++-+..|+|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 4556677777777766664432 1 122222333443333321 34689999999999999999999999
Q ss_pred hhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 177 LGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 177 LgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+....|.++.|+. .|+.++|..+.++|++-
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 9999999999887 79999999999988753
No 13
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.76 E-value=1.5 Score=36.15 Aligned_cols=75 Identities=4% Similarity=-0.050 Sum_probs=57.2
Q ss_pred HHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHH
Q 027732 124 KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQ 203 (219)
Q Consensus 124 kvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~ 203 (219)
.+-.+...|..|..+-. -++|...|++|+++++ .++..+|....+..|.+..|++ +|+.++|+...++
T Consensus 154 ~~~~~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~ 221 (293)
T 3u3w_A 154 NLYIENAIANIYAENGY----------LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHH
Confidence 33345556766654432 3579999999999986 4666777777788999999887 7999999999999
Q ss_pred HHHHHHH
Q 027732 204 VRVAALL 210 (219)
Q Consensus 204 Afd~Ai~ 210 (219)
|++-+-.
T Consensus 222 al~~~~~ 228 (293)
T 3u3w_A 222 AIEISCR 228 (293)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887644
No 14
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.59 E-value=1.8 Score=36.54 Aligned_cols=190 Identities=15% Similarity=0.036 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHH----HHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVE----ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~e----ERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~ 84 (219)
..+..++....+.|+|++++.+++++++.. +. +.+ =...+..+|-. .+....+...+....+..+..++...
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAG--TE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhc--cc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCchH
Confidence 456678888999999999999999999876 44 222 23344444432 34444454444322211111111110
Q ss_pred H-H----HHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhh-------cCchhHHHHH
Q 027732 85 V-S----VIKEY-RSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEF-------KTGAERKEAA 151 (219)
Q Consensus 85 ~-~----~i~~y-~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~~~~~~~~~~ 151 (219)
. . ...-| ...--++-...+...+.+.... .+.......+...|..|...-.. ...++-....
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~ 199 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEAL 199 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHH
Confidence 0 0 00000 1111133344445555544332 12233444455556665554430 0011223446
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALL 210 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~ 210 (219)
+.|...|++|++++... +.+|.......|.+..++. .|+.++|+...++|++-+-.
T Consensus 200 ~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 200 TRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYL-LGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHh
Confidence 78899999999988643 2334444455555555554 89999999998888765543
No 15
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=94.59 E-value=1.6 Score=35.89 Aligned_cols=151 Identities=10% Similarity=0.012 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVI 88 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i 88 (219)
+.+...+...-..|+|+++++..++.++.. +. ..+....+.. +.. ++. +-. ..|+ ..+.+
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~--~~-~~~~~~~~~~-~~~-~~~----------~~~---~~~~--~~~A~ 135 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKE--EY-HPEFQQFLQW-QYY-VAA----------YVL---KKVD--YEYCI 135 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--CC-CHHHHHHHHH-HHH-HHH----------HHH---TSSC--HHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccc--cC-ChhHHHHHHH-HHH-HHH----------HHh---cCCC--HHHHH
Confidence 344566777777899999999998888764 43 3333222221 111 111 100 0111 11222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhc
Q 027732 89 KEYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAE 168 (219)
Q Consensus 89 ~~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~ 168 (219)
..|. ..+.+ .+...+....+..+...|..|...-+ -+.|...|++|+++++.
T Consensus 136 ~~~~------------~al~~-----~~~~~~~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~- 187 (293)
T 2qfc_A 136 LELK------------KLLNQ-----QLTGIDVYQNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA- 187 (293)
T ss_dssp HHHH------------HHHTT-----CCCSSCTTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-
T ss_pred HHHH------------HHHHH-----HhcCCchHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-
Confidence 2221 12211 12223333445456667777655432 35689999999999863
Q ss_pred CCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 169 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 169 L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
.+....+...+..|.+..|+. +|+.++|+...++|++-+
T Consensus 188 ~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 188 LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred cCccccchHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 442222233567788887776 899999999999998765
No 16
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.29 E-value=0.27 Score=44.77 Aligned_cols=97 Identities=13% Similarity=0.051 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q 027732 97 NELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIR 176 (219)
Q Consensus 97 ~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 176 (219)
+|...+|...+.+-.+.|=|... ..+=-+.--|.-|+.+-. -+.|...|++|+++-++.++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp---~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNV---YMLHMMYQAMGVCLYMQD----------WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSH---HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhch---HHHHHHHHHHHHHHhhcC----------HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 45566777777777666644421 112122223333322211 34689999999999999999999999
Q ss_pred hhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 177 LGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 177 LgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.....|.++-|+. .|+.++|..+-++|++=
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHH
Confidence 9999999998886 79999999999888753
No 17
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=94.15 E-value=0.15 Score=46.19 Aligned_cols=55 Identities=11% Similarity=-0.006 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
-+.|...|++|+++-+..++|.||.......|.++-|.. .|+.++|..+.++|++
T Consensus 345 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 345 LEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999887 7999999999888875
No 18
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.86 E-value=0.61 Score=36.65 Aligned_cols=92 Identities=18% Similarity=0.100 Sum_probs=63.6
Q ss_pred HHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhH
Q 027732 103 CDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALN 182 (219)
Q Consensus 103 c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN 182 (219)
+++.+++..+.+-+. ....+-.+...|..|...-. .+.|...|++|+++++..+.+.+|.......|
T Consensus 24 ~~~al~~~~~~~~~~---~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 24 CKQALEDLEKTSGHD---HPDVATMLNILALVYRDQNK----------YKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp HHHHHHHHHHHHCSS---SHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHccc----------HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 334455554443221 22344445556666654432 35689999999999988888888888777788
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 183 FSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 183 ~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
.+..++. .|+.++|+...++|++-+
T Consensus 91 l~~~~~~-~g~~~~A~~~~~~al~~~ 115 (283)
T 3edt_B 91 LAVLYGK-RGKYKEAEPLCKRALEIR 115 (283)
T ss_dssp HHHHHHT-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hccHHHHHHHHHHHHHHH
Confidence 8877765 799999999999888764
No 19
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=93.76 E-value=2.5 Score=35.10 Aligned_cols=195 Identities=13% Similarity=0.001 Sum_probs=102.8
Q ss_pred CCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCH---HHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcC
Q 027732 4 TDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTV---EERNLLSVAYKNVIGARRASWRIISSIEQKEESRG 80 (219)
Q Consensus 4 m~~~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~---eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~ 80 (219)
+...-..+..++....+.|+|++++.++.++++.. +.-.. .=...++.+|-. .+....+...+..........+
T Consensus 5 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~ 81 (406)
T 3sf4_A 5 MEASCLELALEGERLCKSGDCRAGVSFFEAAVQVG--TEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIG 81 (406)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--cccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhcc
Confidence 34444567788999999999999999999999876 43211 223344444432 3344444444332111111111
Q ss_pred CchhHH-----HHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhh-------c---Cc
Q 027732 81 NEDHVS-----VIKEY-RSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEF-------K---TG 144 (219)
Q Consensus 81 ~~~~~~-----~i~~y-~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~-------~---~~ 144 (219)
++.... ...-| ...--++-...+...+.+.... .++...+..+-..|..|...-.. . ..
T Consensus 82 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 156 (406)
T 3sf4_A 82 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFP 156 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCC
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhh
Confidence 111100 00001 0011223344445555544332 22233344444555555544431 0 01
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 027732 145 AERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAAL 209 (219)
Q Consensus 145 ~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai 209 (219)
++-....+.|...|++|+.++.. . +.+|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 157 ~~a~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 157 EEVRDALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-HTBHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHH
Confidence 22334577888999999988864 3 3345544555566666555 7999999999888876543
No 20
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=93.64 E-value=2.2 Score=33.99 Aligned_cols=189 Identities=12% Similarity=-0.007 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHH----HHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVE----ERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~e----ERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~ 84 (219)
..+...+....+.|+|++++.++++.++.. +. +.+ =...+..+|-. .+....+...+....+.....+++..
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~ 81 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVG--TE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLG 81 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhC--cc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccHH
Confidence 467788999999999999999999999875 43 222 12233444332 23334444444322111111111111
Q ss_pred HH-----HHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhc----------CchhHH
Q 027732 85 VS-----VIKEY-RSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFK----------TGAERK 148 (219)
Q Consensus 85 ~~-----~i~~y-~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~----------~~~~~~ 148 (219)
.. ...-| ...--++-...+...+.+... ..++...+..+...|..|...-... ..++-.
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~ 156 (338)
T 3ro2_A 82 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVR 156 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHH
Confidence 10 00001 111122333444445544433 2333445556667777776665511 012223
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 027732 149 EAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAAL 209 (219)
Q Consensus 149 ~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai 209 (219)
...+.|.+.|++|+.++... +.+|.......+.+..++. .|+.++|....+++++-+-
T Consensus 157 ~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 157 NALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHH
Confidence 44677888888888887642 2234444444555555554 7999999999888876543
No 21
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=93.00 E-value=2.9 Score=33.57 Aligned_cols=47 Identities=9% Similarity=-0.027 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.|...|++|+++. |.+| ....+.+..++. +|+.++|....++++.
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 298 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHSL-MGNFENAVDYFHTALG 298 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHHH-HTCHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHHH-hccHHHHHHHHHHHHc
Confidence 456888888888652 3343 344555666555 7999999988887753
No 22
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.98 E-value=2.8 Score=33.33 Aligned_cols=179 Identities=12% Similarity=0.028 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCC-----HHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchh
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELT-----VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~-----~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~ 84 (219)
-+..++.+....|+|++++.++.+.++.. .... ..=...++.+|-. .+....+...+.......+..++...
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~ 121 (338)
T 3ro2_A 45 IYSQLGNAYFYLHDYAKALEYHHHDLTLA--RTIGDQLGEAKASGNLGNTLKV-LGNFDEAIVCCQRHLDISRELNDKVG 121 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH--HHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHh--hcccccHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHHHhcCchH
Confidence 35578888899999999999998877542 1111 1112233333322 23333444433321111111111111
Q ss_pred H-----HHHHHHHHH-H--------------------HHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhh
Q 027732 85 V-----SVIKEYRSK-I--------------------ENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYL 138 (219)
Q Consensus 85 ~-----~~i~~y~~k-i--------------------~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYl 138 (219)
. ....-|... - -++-...+...+.+.... .+.......+...|..|...
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~~~~~ 196 (338)
T 3ro2_A 122 EARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTAL-----GDRAAQGRAFGNLGNTHYLL 196 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHh
Confidence 0 111111111 0 233334444444444332 12233344444555555443
Q ss_pred hhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 027732 139 AEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAAL 209 (219)
Q Consensus 139 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai 209 (219)
-. .+.|.+.|++|++++... .+|...+.+++.-...|.-.|++++|....+++++-+-
T Consensus 197 ~~----------~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 197 GN----------FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp TC----------HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CC----------HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 22 346888899998887642 23333444444434444457999999988888876543
No 23
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.96 E-value=2.7 Score=33.07 Aligned_cols=53 Identities=11% Similarity=0.011 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 153 STLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 153 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.|...|++|+++....-.+.++.......+.+.+|+ ..|+.++|+...++|+.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYT-INRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 478899999998864322222222234445555555 48999999999888875
No 24
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.91 E-value=3.1 Score=34.32 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (219)
.-+..++.+....|+|++++.+++++++.+ |. +.+-...+..+|-. .+....+...+..
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLELK--PD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 445677888888888888888888888775 43 34445555555543 3444455555543
No 25
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=92.44 E-value=0.58 Score=40.00 Aligned_cols=76 Identities=13% Similarity=0.082 Sum_probs=52.9
Q ss_pred chhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHH
Q 027732 121 AESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNL 200 (219)
Q Consensus 121 ~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~l 200 (219)
+....+|+-.+|.++...-. -+.|...|++|+.++.. ++ .+|..-....|.+..|+. +|++++|+..
T Consensus 97 ~~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y~~-~~~~~~A~~~ 163 (378)
T 3q15_A 97 GLLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAYYH-MKQTHVSMYH 163 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHHHH-cCCcHHHHHH
Confidence 34455677788887655432 35689999999988753 32 334455555666777665 8999999999
Q ss_pred HHHHHHHHH
Q 027732 201 AKQVRVAAL 209 (219)
Q Consensus 201 Ak~Afd~Ai 209 (219)
.++|++-.-
T Consensus 164 ~~~al~~~~ 172 (378)
T 3q15_A 164 ILQALDIYQ 172 (378)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987544
No 26
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=92.41 E-value=1.4 Score=37.54 Aligned_cols=73 Identities=15% Similarity=0.157 Sum_probs=49.4
Q ss_pred hHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHH
Q 027732 123 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 202 (219)
Q Consensus 123 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk 202 (219)
...+|+-.+|.+|...-. -+.|...|++|+.+++. . |.+|..-....+.+..|+. +|++++|+...+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~ 167 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-KDRIEKAEFFFKMSESYYY-MKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-CCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 445667778877654432 45689999999988753 3 2333333444555666665 899999999999
Q ss_pred HHHHHH
Q 027732 203 QVRVAA 208 (219)
Q Consensus 203 ~Afd~A 208 (219)
+|++-+
T Consensus 168 ~al~~~ 173 (383)
T 3ulq_A 168 QAYEIY 173 (383)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988753
No 27
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.30 E-value=0.24 Score=45.09 Aligned_cols=55 Identities=7% Similarity=-0.002 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|++|+++.++.|.|.||-.+...-|.+.-|.. +|+.++|..+.++|++-
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i 369 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKP 369 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHH
Confidence 56788999999999889999999999999898888776 89999999999998754
No 28
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.68 E-value=5.6 Score=33.77 Aligned_cols=182 Identities=8% Similarity=-0.028 Sum_probs=91.9
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHH-----HHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhH
Q 027732 11 NVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEE-----RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHV 85 (219)
Q Consensus 11 li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eE-----RnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~ 85 (219)
+..++++..+.|+|++++++++++.... +.++... ++++...+. ..+..-.+..............++....
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 134 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYM--MQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLK 134 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHH--HTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHH
Confidence 6789999999999999999999988765 5555432 222222221 1111222222221111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHH
Q 027732 86 SVIKEYRSKIENELSKICDGILSLLESHL--IPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQD 163 (219)
Q Consensus 86 ~~i~~y~~ki~~EL~~~c~eii~lid~~L--ip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 163 (219)
..+....-++-.+.-. -.+.+.++...+ .+...+....+-++-..|..|.-+- + .++|...|++|..
T Consensus 135 ~~~~~~la~~~~~~g~-~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~A~~~~~~al~ 203 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQ-YKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLR-----N-----LAKSKASLTAART 203 (434)
T ss_dssp HHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTT-----C-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccC-hHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhC-----c-----HHHHHHHHHHHHH
Confidence 1111111111111111 112222222221 1222233344544555555543221 1 4568999999999
Q ss_pred HHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 164 IALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 164 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
++.. .+ ..|.-.|...+...-+|...++.++|+..-.++|+..
T Consensus 204 ~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~ 246 (434)
T 4b4t_Q 204 AANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESY 246 (434)
T ss_dssp HHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred Hhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 8863 43 2334446666666667777899999999998888754
No 29
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=91.52 E-value=0.32 Score=44.94 Aligned_cols=56 Identities=14% Similarity=0.028 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
+.|...|++|+++.++.|.|.||-.+...-|.+..|.. .|+.++|..+.++|++--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGY 381 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHH
Confidence 46788899999999889999999999999999888877 799999999999987643
No 30
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.37 E-value=4.1 Score=31.55 Aligned_cols=59 Identities=14% Similarity=0.008 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~ 70 (219)
+.+..++.+..+.|+|++++.++.++++.+ ++-+..-...+..+|-. .+....|...+.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 66 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLT--NNQDSVTAYNCGVCADN-IKKYKEAADYFD 66 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--TTCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcc--CCCCcHHHHHHHHHHHH-hhcHHHHHHHHH
Confidence 678889999999999999999999999886 53444444445555543 445555655554
No 31
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=90.80 E-value=5.2 Score=31.78 Aligned_cols=68 Identities=16% Similarity=0.092 Sum_probs=47.9
Q ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhh
Q 027732 7 SREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQK 75 (219)
Q Consensus 7 ~r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~ 75 (219)
+-+.+..+|...-+.|+|++++..++++++..+..++..+=...+..+|-. .+....|...+....+.
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQI 81 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHH
Confidence 356788899999999999999999999998762233345666666666644 45666666666654443
No 32
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=90.31 E-value=8.1 Score=33.20 Aligned_cols=56 Identities=13% Similarity=0.000 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHhcC--CCCC----cchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAEL--APTH----PIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L--~pt~----pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|...|+++++.-...+ .|.+ |-......+.+..++. .|+.++|+...++++..
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~ 266 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIEL 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhh
Confidence 5677888888887543334 4554 5556666666666665 79999999998888754
No 33
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=90.11 E-value=7.8 Score=32.68 Aligned_cols=175 Identities=11% Similarity=0.024 Sum_probs=90.5
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCC-chhHH
Q 027732 13 YMAKLAEQAERYEEMVEFMEKVAKTVDVEELTV-----EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN-EDHVS 86 (219)
Q Consensus 13 ~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~-----eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~-~~~~~ 86 (219)
+++......|+|++++.+.++.+... ....+ +=...++.+|-. .+..-.|...+....+-.+..++ .....
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 184 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKL--IFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLL 184 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTG--GGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHH--hhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 37888889999999999999998753 22222 222334444433 23333333333211111111111 00100
Q ss_pred HHHH-----HH-HHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHH
Q 027732 87 VIKE-----YR-SKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKS 160 (219)
Q Consensus 87 ~i~~-----y~-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~ 160 (219)
.+-. |. ..=-++-....+..+++..+. .+.......+.-.|..|..+-. -+.|...|++
T Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~ 249 (383)
T 3ulq_A 185 QCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQSQ----------YEDAIPYFKR 249 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHH
Confidence 0000 00 001122233344444443321 2233333344445665543321 4579999999
Q ss_pred HHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 161 AQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 161 A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
|+++++..-. .|.......|.+..++. +|++++|....++|+.-+
T Consensus 250 al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 250 AIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 9999875332 13334455666666665 799999999999988754
No 34
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=89.75 E-value=10 Score=33.57 Aligned_cols=48 Identities=8% Similarity=0.095 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|.+.|++++++ .|.+| ....+.+..|. -.|+.++|....+++++-
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALVYL-HKKIPGLAITHLHESLAI 579 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 45678888888765 35554 33444444444 589999999999888764
No 35
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=89.75 E-value=9 Score=32.88 Aligned_cols=50 Identities=14% Similarity=0.053 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVR 205 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Af 205 (219)
.++|.+.|++|+++ .|.++..-.+.+++..+.+.-.++.++|+..-++|+
T Consensus 350 ~~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 350 YEEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 35688999999853 344445555677888887777899999988777765
No 36
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=89.75 E-value=6.9 Score=31.56 Aligned_cols=47 Identities=9% Similarity=0.001 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.|.+.|++++++ .|.+| ....+.+..++. .|+.++|+...++|++
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~-~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYLI-EEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 35678888888764 34443 455666666554 8999999998888864
No 37
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=89.63 E-value=7.8 Score=32.04 Aligned_cols=58 Identities=10% Similarity=0.023 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~ 70 (219)
+.++.+|....+.|+|++++.+++++++.. |. +.+-...+..+|-. .+....+...+.
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~ 123 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQD--PG-DAEAWQFLGITQAE-NENEQAAIVALQ 123 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--cC-CHHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 458889999999999999999999999876 43 35555666666643 344555555554
No 38
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=89.54 E-value=11 Score=33.58 Aligned_cols=173 Identities=17% Similarity=0.098 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhCCH-HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHH
Q 027732 9 EENVYMAKLAEQAERY-EEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSV 87 (219)
Q Consensus 9 ~~li~~AklaeqaeRy-~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~ 87 (219)
+-+..++++....|+| ++++.++++.++.+ +. +.+=...+..+|-. .+....|...+...-+.... ......+
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~--p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~--~~~~~~l 176 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLE--PE-LVEAWNQLGEVYWK-KGDVTSAHTCFSGALTHCKN--KVSLQNL 176 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTCCC--HHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCC--HHHHHHH
Confidence 4556778888888999 99999999988876 44 35556666666644 24444554444322211100 0001111
Q ss_pred HHHHHH----------HHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHH
Q 027732 88 IKEYRS----------KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLA 157 (219)
Q Consensus 88 i~~y~~----------ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 157 (219)
..-|.. .=-++-...++..+.+ -|.. . ..+-..|..|..+. +..+. ...-.+.|.++
T Consensus 177 g~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~--~~~~~lg~~~~~~~-~~~~~-~~g~~~~A~~~ 243 (474)
T 4abn_A 177 SMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----G--RSWYILGNAYLSLY-FNTGQ-NPKISQQALSA 243 (474)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----H--HHHHHHHHHHHHHH-HHTTC-CHHHHHHHHHH
T ss_pred HHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----H--HHHHHHHHHHHHHH-Hhhcc-ccchHHHHHHH
Confidence 111111 1112223333333332 2321 1 22334455554331 11222 11336678999
Q ss_pred HHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 158 YKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 158 Y~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
|++|+.+ .|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 244 ~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 244 YAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 9999876 23222556677788887776 7999999998888865
No 39
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=89.36 E-value=8 Score=31.72 Aligned_cols=58 Identities=9% Similarity=-0.005 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~ 70 (219)
+.+..++....+.|+|++++.++.++++.. |. +.+-...+..+|-. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQD--PK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 457889999999999999999999999875 43 34555556655543 244444444443
No 40
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=89.26 E-value=0.35 Score=43.78 Aligned_cols=55 Identities=11% Similarity=-0.042 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|++++++.++.|+|.||..+...-|.+.-|.. +|+.++|..+.++++.-
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i 358 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEP 358 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 45677788888777778999999999999998887776 79999999999988754
No 41
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=89.25 E-value=1.1 Score=32.35 Aligned_cols=48 Identities=15% Similarity=0.238 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
-+.|.+.|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 45789999999865 45554 456678888777 79999999998888764
No 42
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=88.89 E-value=4.5 Score=28.28 Aligned_cols=54 Identities=15% Similarity=0.087 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
+.|...|++|++++... +.+|.......|.+..++. .|+.++|....++|++-+
T Consensus 66 ~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 45677777777776532 1223333344455555554 677777777777776554
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=88.87 E-value=10 Score=32.20 Aligned_cols=58 Identities=17% Similarity=0.158 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhh
Q 027732 11 NVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSI 72 (219)
Q Consensus 11 li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~i 72 (219)
...+|.+..+.|+|++++..+.++++.. +. +..-...+..+|-. .+....+...+...
T Consensus 146 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~ 203 (450)
T 2y4t_A 146 LRSQALNAFGSGDYTAAIAFLDKILEVC--VW-DAELRELRAECFIK-EGEPRKAISDLKAA 203 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCGGGGHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-ChHHHHHHHHHHHH-CCCHHHHHHHHHHH
Confidence 3445777889999999999999999875 33 45555666666543 34555565555443
No 44
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=88.73 E-value=6.6 Score=29.98 Aligned_cols=165 Identities=9% Similarity=0.014 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHH
Q 027732 8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSV 87 (219)
Q Consensus 8 r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~ 87 (219)
-.-+..+|.+..+.|+|++++.+++++++.. +. +..-...+..+|-. .+....+...+....+..... .......
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~~ 131 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELD--SS-AATAYYGAGNVYVV-KEMYKEAKDMFEKALRAGMEN-GDLFYML 131 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTCCS-HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--Cc-chHHHHHHHHHHHH-hccHHHHHHHHHHHHHhCCCC-HHHHHHH
Confidence 3455677888888889999999888888765 43 33444445554432 344445555554332221100 0001111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHH
Q 027732 88 IKEYR-SKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIAL 166 (219)
Q Consensus 88 i~~y~-~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 166 (219)
..-|. ..--++-...++.++.+ -|. + .. .+-..|..|.-.- + .+.|...|++++..
T Consensus 132 a~~~~~~~~~~~A~~~~~~~~~~-----~~~--~--~~--~~~~l~~~~~~~~-----~-----~~~A~~~~~~~~~~-- 188 (243)
T 2q7f_A 132 GTVLVKLEQPKLALPYLQRAVEL-----NEN--D--TE--ARFQFGMCLANEG-----M-----LDEALSQFAAVTEQ-- 188 (243)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHH-----CTT--C--HH--HHHHHHHHHHHHT-----C-----CHHHHHHHHHHHHH--
T ss_pred HHHHHHhccHHHHHHHHHHHHHh-----CCc--c--HH--HHHHHHHHHHHcC-----C-----HHHHHHHHHHHHHh--
Confidence 11110 01112222223333221 121 1 11 1223333332211 1 24577778877654
Q ss_pred hcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 167 AELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 167 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.|.+| ....+.+..++. .|+.++|....+++++-
T Consensus 189 ---~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 189 ---DPGHA---DAFYNAGVTYAY-KENREKALEMLDKAIDI 222 (243)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-TTCTTHHHHHHHHHHHH
T ss_pred ---CcccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHcc
Confidence 33333 344555555554 79999999998888764
No 45
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=88.44 E-value=4.9 Score=28.10 Aligned_cols=149 Identities=13% Similarity=0.026 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHHH
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIK 89 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~ 89 (219)
-+..++.+....|+|++++.+..+.++.. +.... ......++-++.. +-.. .|+ ..+.+
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~--~~~~~--~~~~~~~~~~l~~-----------~~~~---~g~--~~~A~- 69 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIA--KEFGD--KAAERIAYSNLGN-----------AYIF---LGE--FETAS- 69 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH--HHHTC--HHHHHHHHHHHHH-----------HHHH---TTC--HHHHH-
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHH--HHhCC--chHHHHHHHHHHH-----------HHHH---cCC--HHHHH-
Confidence 45678888899999999999999988754 22111 1122222222111 1111 121 11222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 027732 90 EYRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAEL 169 (219)
Q Consensus 90 ~y~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L 169 (219)
..+...+.+.... .++......+-..|..|...-. .+.|...|++|++++.. .
T Consensus 70 -----------~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~----------~~~A~~~~~~a~~~~~~-~ 122 (164)
T 3ro3_A 70 -----------EYYKKTLLLARQL-----KDRAVEAQSCYSLGNTYTLLQD----------YEKAIDYHLKHLAIAQE-L 122 (164)
T ss_dssp -----------HHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-T
T ss_pred -----------HHHHHHHHHHHHh-----CCcHHHHHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHH-c
Confidence 2223333333221 2223333344444555443321 45688999999998864 2
Q ss_pred CCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 170 APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 170 ~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
+ .+|.......+.+..++. .|+.++|+...++|++-+
T Consensus 123 ~-~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 123 K-DRIGEGRACWSLGNAYTA-LGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp T-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred c-chHhHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHH
Confidence 2 233444445556665554 799999999988887654
No 46
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=88.44 E-value=11 Score=32.01 Aligned_cols=170 Identities=14% Similarity=0.059 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVI 88 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i 88 (219)
.-+..++.+..+.|+|++++..+.++++.+ +. +.+-...+..+|-. .+....++..+........ .+......+
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~p--~~~~~~~~~ 251 (450)
T 2y4t_A 178 ELRELRAECFIKEGEPRKAISDLKAASKLK--ND-NTEAFYKISTLYYQ-LGDHELSLSEVRECLKLDQ--DHKRCFAHY 251 (450)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHHH--CS-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT--TCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCC--ChHHHHHHH
Confidence 345678888999999999999999998775 33 34555566666644 3555566666644332211 111111100
Q ss_pred HHHHHHH--HHHHHHH------HHHHHHHHhhcc--cCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHH
Q 027732 89 KEYRSKI--ENELSKI------CDGILSLLESHL--IPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAY 158 (219)
Q Consensus 89 ~~y~~ki--~~EL~~~------c~eii~lid~~L--ip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 158 (219)
... .++ ...+-.. -.+.+..+++.+ -|. ++....-.+...|+.|.-. |+ .+.|...|
T Consensus 252 ~~~-~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~~~~~~-----g~-----~~~A~~~~ 318 (450)
T 2y4t_A 252 KQV-KKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICHCFSKD-----EK-----PVEAIRVC 318 (450)
T ss_dssp HHH-HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHTT-----TC-----HHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHC-----CC-----HHHHHHHH
Confidence 000 000 0000000 122233333222 232 2332233344445544322 11 45678888
Q ss_pred HHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 159 KSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 159 ~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
++|+++ .|.+| ....+.+..+. ..|+.++|+...++++.
T Consensus 319 ~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 319 SEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQE 357 (450)
T ss_dssp HHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHT
T ss_pred HHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Confidence 888764 34444 44455555554 48999999999888864
No 47
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=88.23 E-value=7.1 Score=29.78 Aligned_cols=165 Identities=11% Similarity=0.041 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVI 88 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i 88 (219)
..+..+|...-+.|+|++++.+++++++.. +. +.+-...+..+|-. .+....+...+....+..... ........
T Consensus 24 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la 98 (243)
T 2q7f_A 24 MTGGQQMGRGSEFGDYEKAAEAFTKAIEEN--KE-DAIPYINFANLLSS-VNELERALAFYDKALELDSSA-ATAYYGAG 98 (243)
T ss_dssp ------------------CCTTHHHHHTTC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhC--cc-cHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCcc-hHHHHHHH
Confidence 456677888889999999999999999765 33 34555555555532 445555655554333221110 00111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHh
Q 027732 89 KEYRS-KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALA 167 (219)
Q Consensus 89 ~~y~~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 167 (219)
.-|.. .--++-...++.++.+ -|. + ..+ +...|..|... |+ .+.|.+.|++++++
T Consensus 99 ~~~~~~~~~~~A~~~~~~~~~~-----~~~--~--~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~--- 154 (243)
T 2q7f_A 99 NVYVVKEMYKEAKDMFEKALRA-----GME--N--GDL--FYMLGTVLVKL-----EQ-----PKLALPYLQRAVEL--- 154 (243)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH-----TCC--S--HHH--HHHHHHHHHHT-----SC-----HHHHHHHHHHHHHH---
T ss_pred HHHHHhccHHHHHHHHHHHHHh-----CCC--C--HHH--HHHHHHHHHHh-----cc-----HHHHHHHHHHHHHh---
Confidence 11111 1111222222232221 122 1 112 23344443322 11 35678888888764
Q ss_pred cCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 168 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 168 ~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
.|.+| ....+.+..++. .|+.++|+...+++....
T Consensus 155 --~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~ 189 (243)
T 2q7f_A 155 --NENDT---EARFQFGMCLAN-EGMLDEALSQFAAVTEQD 189 (243)
T ss_dssp --CTTCH---HHHHHHHHHHHH-HTCCHHHHHHHHHHHHHC
T ss_pred --CCccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 23333 344556666665 799999999988887653
No 48
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=88.18 E-value=9.9 Score=31.37 Aligned_cols=179 Identities=13% Similarity=0.070 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCC-----HHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchh
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELT-----VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~-----~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~ 84 (219)
-+..++.+..+.|+|++++.++++.++.. .... ..-...+..+|- ..+....+...+..........++...
T Consensus 49 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~ 125 (406)
T 3sf4_A 49 IYSQLGNAYFYLHDYAKALEYHHHDLTLA--RTIGDQLGEAKASGNLGNTLK-VLGNFDEAIVCCQRHLDISRELNDKVG 125 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccccc
Confidence 35578889999999999999999887543 1111 112223333332 234444555444322221111111111
Q ss_pred H-----HHHHHHHHH-H--------------------HHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhh
Q 027732 85 V-----SVIKEYRSK-I--------------------ENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYL 138 (219)
Q Consensus 85 ~-----~~i~~y~~k-i--------------------~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYl 138 (219)
. ....-|... - -++-...+...+.+.... .+.......+...|..|...
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~ 200 (406)
T 3sf4_A 126 EARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL-----GDRAAQGRAFGNLGNTHYLL 200 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-----cCcHHHHHHHHHHHHHHHHc
Confidence 1 111111111 0 233344445555554432 12233333444456555443
Q ss_pred hhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 027732 139 AEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAAL 209 (219)
Q Consensus 139 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai 209 (219)
-. .+.|...|++|++++.. . +.++.......|.+..++ -+|+.++|....++|++-+-
T Consensus 201 g~----------~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 258 (406)
T 3sf4_A 201 GN----------FRDAVIAHEQRLLIAKE-F-GDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLAR 258 (406)
T ss_dssp TB----------HHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred cC----------HHHHHHHHHHHHHHHHh-c-CCcHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHH
Confidence 22 34688899999988864 2 222333334445555555 47999999998888876543
No 49
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=87.95 E-value=8.2 Score=30.12 Aligned_cols=44 Identities=14% Similarity=0.170 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAY 55 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvay 55 (219)
+-+..++.+..+.|+|++++..+.++++.+ |. +.+=...+..+|
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~-~~~a~~~lg~~~ 49 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKEN--PQ-DPEALYWLARTQ 49 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTS--SS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHH
Confidence 445566666667777777777777766654 33 234444444444
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=87.78 E-value=20 Score=34.42 Aligned_cols=169 Identities=11% Similarity=0.093 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh-hhhhhhhcCCchhHH
Q 027732 8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS-IEQKEESRGNEDHVS 86 (219)
Q Consensus 8 r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~-ieq~~~~~~~~~~~~ 86 (219)
-+-+..++.+..+.|+|++++.+.++.++.+ |+. .+=.+-|..+|.. .+..-.|...+.. ++.... ..+....
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~--P~~-~~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~--~~~a~~n 82 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVF--PEF-AAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPT--FADAYSN 82 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--SCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT--CHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC--CHHHHHH
Confidence 3567789999999999999999999999987 654 4445555666554 2333334333321 111100 0000111
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 027732 87 VIKEYRSK-IENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIA 165 (219)
Q Consensus 87 ~i~~y~~k-i~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 165 (219)
+-.-|.+. =-++-...++..+++ -|.. ..+ +...|..|+-+- -.+.|.++|++|+++
T Consensus 83 Lg~~l~~~g~~~~A~~~~~kAl~l-----~P~~----~~a--~~~Lg~~~~~~g----------~~~eAi~~~~~Al~l- 140 (723)
T 4gyw_A 83 MGNTLKEMQDVQGALQCYTRAIQI-----NPAF----ADA--HSNLASIHKDSG----------NIPEAIASYRTALKL- 140 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHTT----------CHHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHcC----------CHHHHHHHHHHHHHh-
Confidence 10001000 001111122222221 1221 111 223344333221 145688888888864
Q ss_pred HhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q 027732 166 LAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLFL 212 (219)
Q Consensus 166 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~l 212 (219)
.|.+| ....|.+..+. .+++.++|++..+++.+-.-..+
T Consensus 141 ----~P~~~---~a~~~L~~~l~-~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 141 ----KPDFP---DAYCNLAHCLQ-IVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp ----CSCCH---HHHHHHHHHHH-HTTCCTTHHHHHHHHHHHHHHHH
T ss_pred ----CCCCh---HHHhhhhhHHH-hcccHHHHHHHHHHHHHhChhHH
Confidence 45554 33445544444 47899998888887776554433
No 51
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=87.63 E-value=9.7 Score=30.64 Aligned_cols=169 Identities=15% Similarity=0.136 Sum_probs=87.3
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHHHHH
Q 027732 12 VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEY 91 (219)
Q Consensus 12 i~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~~y 91 (219)
..+|.+..+.|+|++++..++++++.. | -+.+-...+..+|-. .+....+...+....+..... .........-|
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~--~-~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~ 198 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVC--V-WDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTLY 198 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhC--C-CchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 445888999999999999999999875 4 345555666666544 355556666654433221110 01111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhh--------hcchhhhhhhcCchhHHHHHHHHHHHHHHHHH
Q 027732 92 RSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMK--------GDYHRYLAEFKTGAERKEAAESTLLAYKSAQD 163 (219)
Q Consensus 92 ~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 163 (219)
.. . .--.+.+..+...+--....+....+|.++. |..+. ..+ -.+.|...|+++++
T Consensus 199 ~~-----~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~~~ 262 (359)
T 3ieg_A 199 YQ-----L-GDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESVMK 262 (359)
T ss_dssp HH-----H-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHHHH
T ss_pred HH-----c-CCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHHHh
Confidence 11 0 0011222222222211112222222332221 22221 111 14567888888775
Q ss_pred HHHhcCCCCCcchh-hhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 164 IALAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 164 ~a~~~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
. .|.+|... .+..+.+..++. .|+.++|+...++++..
T Consensus 263 ~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 263 T-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp H-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred c-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 4 34555433 345556666665 89999999999988764
No 52
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=87.16 E-value=14 Score=32.00 Aligned_cols=48 Identities=10% Similarity=0.198 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|...|++|+++ .|.+| ....+.+..|+. +|+.++|+...+++++-
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 491 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKLQ-MEKIDEAIELFEDSAIL 491 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 45677778777754 45554 445666666655 89999999998888764
No 53
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=87.15 E-value=10 Score=30.29 Aligned_cols=57 Identities=14% Similarity=-0.053 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCC-cchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTH-PIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~-pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
.+.|...|++|+++....-.+.+ |-......+.+..++. .|+.++|+...++++...
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LKKYAEALDYHRQALVLI 266 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhhC
Confidence 45689999999988754333222 3333455566666654 799999999988887653
No 54
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=86.60 E-value=11 Score=30.07 Aligned_cols=44 Identities=16% Similarity=0.071 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAY 55 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvay 55 (219)
+.++.+|....+.|+|++++.+++++++.. +. +.+-...+..+|
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAA--PE-REEAWRSLGLTQ 65 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHH
Confidence 345666666666677777777776666554 33 333344444443
No 55
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=86.24 E-value=15 Score=31.44 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|...|++|+++ .|.+| ....+.+..+.. .|+.++|....+++++-
T Consensus 431 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 431 FIEATNLLEKASKL-----DPRSE---QAKIGLAQMKLQ-QEDIDEAITLFEESADL 478 (514)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 45678888888764 34443 344555555554 79999999998888763
No 56
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=85.96 E-value=18 Score=31.99 Aligned_cols=54 Identities=13% Similarity=0.066 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhh-hhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLG-LALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|.+.|++++++... . +.+|-... ...+.+.. |-..|+.++|....+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~-~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHA-YRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHh
Confidence 46789999999987653 2 34565433 33444444 44589999999999988764
No 57
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=85.31 E-value=14 Score=30.36 Aligned_cols=58 Identities=10% Similarity=0.198 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~ 70 (219)
.-+..++.+..+.|+|++++.++++.++.+ |. +.+-...+..+|.. .+....+...+.
T Consensus 100 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 157 (365)
T 4eqf_A 100 EAWQFLGITQAENENEQAAIVALQRCLELQ--PN-NLKALMALAVSYTN-TSHQQDACEALK 157 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 456788899999999999999999999876 43 34445555555543 344445555543
No 58
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=85.16 E-value=11 Score=28.83 Aligned_cols=29 Identities=10% Similarity=0.026 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
-+..++.+..+.|+|++++.++.+.++..
T Consensus 40 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 68 (258)
T 3uq3_A 40 YLNNRAAAEYEKGEYETAISTLNDAVEQG 68 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 34566677777777777777777777654
No 59
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.12 E-value=11 Score=29.01 Aligned_cols=57 Identities=9% Similarity=-0.011 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~ 70 (219)
-+..+|.+..+.|+|++++.+++++++.. +. +.+-...+..+|-. .+....+...+.
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~~ 95 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEID--PS-SADAHAALAVVFQT-EMEPKLADEEYR 95 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcC--CC-hHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 35677888888899999999998888765 33 34444555555533 344445555554
No 60
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=85.01 E-value=12 Score=29.14 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKN 57 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn 57 (219)
+-+..++.+..+.|++++++..++++++.+ |. +.+-...+..+|..
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~--P~-~~~a~~~lg~~~~~ 85 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVART--PR-YLGGYMVLSEAYVA 85 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC-cHHHHHHHHHHHHH
Confidence 456678999999999999999999999886 54 34445555555543
No 61
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=84.98 E-value=0.87 Score=33.81 Aligned_cols=56 Identities=18% Similarity=0.171 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHhcC---CCC-------CcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAEL---APT-------HPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L---~pt-------~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
-+.|...|++|+.+..... .|+ +|....+..|.+..|+. +|+.++|+..+.+|+.-
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHhc
Confidence 3468888999988864321 233 56777788888888776 79999998888887653
No 62
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=84.81 E-value=15 Score=30.20 Aligned_cols=52 Identities=6% Similarity=-0.128 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVR 205 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Af 205 (219)
-+.|...|++|+++.... +. +| ..+.++.--+..|-.+|++++|+..-+++.
T Consensus 171 ~~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 456899999999988642 21 22 233233333344445799999988776654
No 63
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=84.17 E-value=17 Score=30.30 Aligned_cols=178 Identities=11% Similarity=0.021 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCC-----HHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchh
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELT-----VEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDH 84 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~-----~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~ 84 (219)
-+..++.+....|+|++++.++++.++.. .... ..=...+..+|- ..+....+...+....+.....++...
T Consensus 88 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~ 164 (411)
T 4a1s_A 88 IYSQLGNAYFYLGDYNKAMQYHKHDLTLA--KSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLS 164 (411)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH--HHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHH
Confidence 35678888889999999999999888652 1111 112223333332 233444444444322111111111100
Q ss_pred -----HHHHHHHHHH-H-----------------HHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhh
Q 027732 85 -----VSVIKEYRSK-I-----------------ENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEF 141 (219)
Q Consensus 85 -----~~~i~~y~~k-i-----------------~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~ 141 (219)
.....-|... - -++-...+.+.+.+.... .+.......+-..|..|...-.
T Consensus 165 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~- 238 (411)
T 4a1s_A 165 EGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLLGD- 238 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHcCC-
Confidence 0111111111 1 233444455555544332 1223344445555655544322
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhh-hHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 027732 142 KTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLA-LNFSVFYYEILNSPDRACNLAKQVRVAAL 209 (219)
Q Consensus 142 ~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~-LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai 209 (219)
.+.|...|++|+++.... + ++...+.+ .|.+..|+ -.|+.++|+...++|++-+-
T Consensus 239 ---------~~~A~~~~~~al~~~~~~--~-~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 294 (411)
T 4a1s_A 239 ---------FQAAIEHHQERLRIAREF--G-DRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALAV 294 (411)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH--T-CHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHH
T ss_pred ---------hHHHHHHHHHHHHHHHhc--C-CcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHHH
Confidence 345788888888887642 1 22233333 44444444 47888888888888776554
No 64
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=83.19 E-value=18 Score=29.75 Aligned_cols=55 Identities=11% Similarity=-0.019 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcch-hhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIR-LGLALNFSVFYYEILNSPDRACNLAKQVRVAAL 209 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai 209 (219)
.+.|...|++|+++... . .+|.. .....|.+.+|.. +|+.++|+...++|..-.-
T Consensus 131 ~~~A~~~~~~Al~~~~~-~--~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~ 186 (307)
T 2ifu_A 131 LSKAVHLYQQAAAVFEN-E--ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMYK 186 (307)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-C--CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 45789999999998864 2 12323 3355667777766 8999999999988887543
No 65
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=83.07 E-value=3.8 Score=29.54 Aligned_cols=46 Identities=17% Similarity=0.096 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 4577778877753 33443 445566666665 6888888777776654
No 66
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=81.72 E-value=18 Score=28.71 Aligned_cols=44 Identities=9% Similarity=0.011 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAY 55 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvay 55 (219)
.-+..++.+..+.|+|++++.+++++++.. +. +.+-...+..+|
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~-~~~~~~~la~~~ 99 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARMLD--PK-DIAVHAALAVSH 99 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--cC-CHHHHHHHHHHH
Confidence 456678899999999999999999999876 43 233333444444
No 67
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=81.45 E-value=8 Score=29.29 Aligned_cols=86 Identities=21% Similarity=0.100 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHh---cCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh--hhh--hhhhcCCchhHHHHHHHHHH
Q 027732 22 ERYEEMVEFMEKVAK---TVDVEELTVEERNLLSVAYKNVIGARRASWRIISS--IEQ--KEESRGNEDHVSVIKEYRSK 94 (219)
Q Consensus 22 eRy~dm~~~mk~~i~---~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~--ieq--~~~~~~~~~~~~~i~~y~~k 94 (219)
+|.|..++++|.-+. ++ ++||.|-|.=|.--.|...-.-|-|+|-+.. ..+ +.+..+ .+-++-..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~--~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr 83 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTG--GGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQ 83 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCS--SBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHh
Confidence 577888888877653 46 9999999999998888888888888887742 111 111111 111344455
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 027732 95 IENELSKICDGILSLLESHL 114 (219)
Q Consensus 95 i~~EL~~~c~eii~lid~~L 114 (219)
.+++|..+.+..+.-||..|
T Consensus 84 ~e~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 84 ALWEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666666554
No 68
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=81.16 E-value=3.5 Score=35.57 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHhc-CCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAE-LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVR 205 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~-L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Af 205 (219)
-+.|.++|++|+++.+.. ....||-.+...-|.+.-|+. +|+.++|...-++|.
T Consensus 67 ~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~ 121 (472)
T 4g1t_A 67 NEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHH
Confidence 356899999999998653 445678777777788888776 799999987766554
No 69
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=80.96 E-value=4.4 Score=29.06 Aligned_cols=54 Identities=7% Similarity=-0.082 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
-+.|.+.|++|+++.. ..++.++.+-....|.+..+. -+++.++|++.-++|+.
T Consensus 58 ~~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~~-~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 58 FAECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAFQ-KQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 3568999999999875 355555543334455666555 48999999988777765
No 70
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=80.93 E-value=17 Score=28.09 Aligned_cols=56 Identities=11% Similarity=-0.029 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHH
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRII 69 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l 69 (219)
-+..++.+....|+|++++.++++.++.+ |. +.+-...+..+|-. .+....+.+.+
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~--~~-~~~~~~~la~~~~~-~~~~~~A~~~~ 100 (275)
T 1xnf_A 45 LLYERGVLYDSLGLRALARNDFSQALAIR--PD-MPEVFNYLGIYLTQ-AGNFDAAYEAF 100 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CC-CHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHcC--CC-cHHHHHHHHHHHHH-ccCHHHHHHHH
Confidence 34456666666777777777777776654 33 33444445544433 33344444444
No 71
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=80.76 E-value=18 Score=29.38 Aligned_cols=89 Identities=13% Similarity=0.038 Sum_probs=51.6
Q ss_pred HHHHHHhhcccCCCCCchhH--HHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh-hhh
Q 027732 105 GILSLLESHLIPSASSAESK--VFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLG-LAL 181 (219)
Q Consensus 105 eii~lid~~Lip~~~~~esk--vfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~L 181 (219)
+.+.+++..+-.....++.+ +.|+...|.+|... ++ .+.|...|++|+++. .+..++.... +..
T Consensus 93 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~-----~~~Ai~~~~~al~~~---~~~~~~~~~~~~~~ 159 (293)
T 3u3w_A 93 EIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKK-----VD-----YEYCILELKKLLNQQ---LTGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTS-----SC-----HHHHHHHHHHHHHTC---CCCSCTTHHHHHHH
T ss_pred HHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcc-----cC-----HHHHHHHHHHHHHHh---cccccHHHHHHHHH
Confidence 34444444433222333333 44556567665221 11 356889999998753 2233333333 345
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 182 NFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 182 N~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
|.+++|++ +|+.++|+..-++|++.
T Consensus 160 ~lg~~y~~-~g~~~~A~~~~~~al~~ 184 (293)
T 3u3w_A 160 AIANIYAE-NGYLKKGIDLFEQILKQ 184 (293)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 56666665 89999999999999864
No 72
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=80.33 E-value=22 Score=28.93 Aligned_cols=53 Identities=6% Similarity=-0.088 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchh-hhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|..+|++|+++.... . +|... ....|.+.++.. +|++++|+..-+++.+.
T Consensus 134 ~~~A~~~~~~Al~~~~~~-~--~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 187 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD-Q--SVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIKS 187 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhC-C--ChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 457899999999987531 1 22222 345566777776 79999999888877653
No 73
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=80.31 E-value=4.8 Score=27.25 Aligned_cols=55 Identities=7% Similarity=-0.056 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|...|++|+.+.. ..++.+|.......+.+..++. +|+.++|....+++++.
T Consensus 54 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 54 YNKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 3568889999998875 3455555545666777777765 79999999988888763
No 74
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=79.63 E-value=17 Score=27.06 Aligned_cols=58 Identities=9% Similarity=0.050 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~ 70 (219)
.-+..++.+..+.|+|++++.+++++++.. +. +.+-...+..+|-. .+....+...+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~ 66 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSD--PK-NELAWLVRAEIYQY-LKVNDKAQESFR 66 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhC--cc-chHHHHHHHHHHHH-cCChHHHHHHHH
Confidence 345677888889999999999999998875 43 24445555555543 344455555554
No 75
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=79.58 E-value=12 Score=25.53 Aligned_cols=28 Identities=11% Similarity=0.102 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 11 NVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 11 li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
+..+|....+.|+|++++..+++++...
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 32 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELY 32 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHC
Confidence 5667888888999999999999988766
No 76
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=79.04 E-value=5.5 Score=29.28 Aligned_cols=47 Identities=11% Similarity=-0.020 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|++|+++ .|.+ .....|.+..|+. +|+.++|+...++++.-
T Consensus 62 ~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKY---SKAWSRLGLARFD-MADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 3455555555543 2333 2334444554444 56666666666655543
No 77
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=78.15 E-value=20 Score=27.22 Aligned_cols=49 Identities=8% Similarity=0.012 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|....++|+.-.
T Consensus 189 ~~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 189 FPEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CHHHH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHhC
Confidence 45688888888764 34443 445556665554 799999999998887765
No 78
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=78.14 E-value=7.5 Score=25.83 Aligned_cols=46 Identities=15% Similarity=0.124 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4688889998865 44454 445677777665 7999999988887764
No 79
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=77.63 E-value=5.6 Score=25.49 Aligned_cols=48 Identities=17% Similarity=0.252 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|...|++|+.+ .|.+| ....|.+..++. .|+.++|+...++++..
T Consensus 25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 34688888888864 34443 345666766665 79999999988888764
No 80
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=76.87 E-value=25 Score=27.61 Aligned_cols=62 Identities=18% Similarity=0.041 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhh---------hhhhhhHHHHHHhhh
Q 027732 12 VYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNV---------IGARRASWRIISSIE 73 (219)
Q Consensus 12 i~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~---------i~~~R~s~R~l~~ie 73 (219)
..+|.+..+.|+|++++..++++++..+......+-...+..+|.+. .+....|...+..+.
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~ 222 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLL 222 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHH
Confidence 67899999999999999999999987733445566677777788654 244455555554433
No 81
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=76.66 E-value=9.9 Score=25.56 Aligned_cols=51 Identities=18% Similarity=0.290 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALL 210 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~ 210 (219)
.+.|...|++|+.. .|.+| ....|.+..++. .|+.++|+...+++++..-.
T Consensus 20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhccc
Confidence 35678888888764 23443 445666776665 79999999999998876544
No 82
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=76.38 E-value=26 Score=27.50 Aligned_cols=183 Identities=11% Similarity=0.059 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC-----CCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhh-hh--cCC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV-----DVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ES--RGN 81 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~-----~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~-~~--~~~ 81 (219)
-+..+|.+....|+|++++.++++.++.. +..+....-...+...|-. .+....+...+....+.. .. ...
T Consensus 71 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~ 149 (311)
T 3nf1_A 71 MLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKDH 149 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35578888899999999999999988652 0011122223333444322 344444555443322211 00 001
Q ss_pred chhHH----HHHHH-HHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHH
Q 027732 82 EDHVS----VIKEY-RSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLL 156 (219)
Q Consensus 82 ~~~~~----~i~~y-~~ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 156 (219)
+.... ...-| ...=-++-....+..+.+.....-+ +....+..+-..|..|...-. .+.|..
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~g~----------~~~A~~ 216 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGP---DDPNVAKTKNNLASCYLKQGK----------FKQAET 216 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCT---TCHHHHHHHHHHHHHHHHHTC----------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHcCC----------HHHHHH
Confidence 11111 00000 0011123334444455544433211 122233334444554433321 356788
Q ss_pred HHHHHHHHHHhc-----------------------------------------CCCCCcchhhhhhHHHHHHHHHhCChH
Q 027732 157 AYKSAQDIALAE-----------------------------------------LAPTHPIRLGLALNFSVFYYEILNSPD 195 (219)
Q Consensus 157 aY~~A~~~a~~~-----------------------------------------L~pt~pirLgL~LN~SVF~yEi~~~~~ 195 (219)
.|++|++++... ....+|-......+.+..|.. .|+.+
T Consensus 217 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~ 295 (311)
T 3nf1_A 217 LYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFE 295 (311)
T ss_dssp HHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHH
T ss_pred HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHH
Confidence 888888775431 122456666666677776665 79999
Q ss_pred HHHHHHHHHHHH
Q 027732 196 RACNLAKQVRVA 207 (219)
Q Consensus 196 ~A~~lAk~Afd~ 207 (219)
+|....++|++-
T Consensus 296 ~A~~~~~~al~l 307 (311)
T 3nf1_A 296 AAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988888753
No 83
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=76.18 E-value=9.2 Score=26.45 Aligned_cols=48 Identities=13% Similarity=0.225 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
-+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 43 ~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 43 YRKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688888888764 4455 4566777777776 79999999999888765
No 84
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=76.13 E-value=11 Score=25.63 Aligned_cols=49 Identities=18% Similarity=0.158 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
.+.|...|++|+++ .|.+|. ...+.+..|+. +|+.++|+...++|+.-+
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYER-LDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHhhh
Confidence 35688888888864 344443 55666666655 899999999999887543
No 85
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.02 E-value=3.6 Score=28.86 Aligned_cols=24 Identities=17% Similarity=-0.035 Sum_probs=11.8
Q ss_pred hHHHHHHHHHhCChHHHHHHHHHHH
Q 027732 181 LNFSVFYYEILNSPDRACNLAKQVR 205 (219)
Q Consensus 181 LN~SVF~yEi~~~~~~A~~lAk~Af 205 (219)
.+.+..++. +|+.++|+...++++
T Consensus 103 ~~~a~~~~~-~~~~~~A~~~~~~al 126 (148)
T 2dba_A 103 YRRSQALEK-LGRLDQAVLDLQRCV 126 (148)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 344444333 456666555555554
No 86
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=75.95 E-value=17 Score=25.08 Aligned_cols=30 Identities=17% Similarity=0.092 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
+.+..++....+.|+|++++.++.+.++.+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 34 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRA 34 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 345566666677777777777777766654
No 87
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=75.58 E-value=39 Score=29.14 Aligned_cols=55 Identities=13% Similarity=0.003 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHh--cCCCCCcc---hhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 153 STLLAYKSAQDIALA--ELAPTHPI---RLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 153 ~a~~aY~~A~~~a~~--~L~pt~pi---rLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+...|++|....++ ...|.+|- .++.++..--..|.-.|+.++|+...++++..
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~ 272 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINL 272 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc
Confidence 344556666555543 45566653 24555555555556689999999988888653
No 88
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=75.38 E-value=11 Score=24.56 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|++|+++ .|.+ .....|.+..++. .|+.++|+...++++..
T Consensus 23 ~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEE---SKYWLMKGKALYN-LERYEEAVDCYNYVINV 69 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 4577777777654 2233 3345666666665 68888888877777653
No 89
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=75.18 E-value=32 Score=27.96 Aligned_cols=29 Identities=14% Similarity=-0.056 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
-+-..+.+....|+|++++++..+.++..
T Consensus 39 ~~~~a~~~~~~~g~~~~A~~~~~~al~~~ 67 (292)
T 1qqe_A 39 LCVQAATIYRLRKELNLAGDSFLKAADYQ 67 (292)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 46666788888999999999998888764
No 90
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=74.19 E-value=36 Score=28.18 Aligned_cols=29 Identities=14% Similarity=0.004 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
-+..++.+..+.|++++++....++++.+
T Consensus 103 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 131 (388)
T 1w3b_A 103 GYINLAAALVAAGDMEGAVQAYVSALQYN 131 (388)
T ss_dssp HHHHHHHHHHHHSCSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 35667777777788888887777777665
No 91
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=73.73 E-value=20 Score=37.94 Aligned_cols=24 Identities=8% Similarity=0.040 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCChHHHHHHHHHHH
Q 027732 182 NFSVFYYEILNSPDRACNLAKQVR 205 (219)
Q Consensus 182 N~SVF~yEi~~~~~~A~~lAk~Af 205 (219)
.--|-+|+-.|..++|+.+..+|+
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHh
Confidence 355678899999999999999884
No 92
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=73.47 E-value=14 Score=24.27 Aligned_cols=47 Identities=17% Similarity=0.080 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhh-hhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLG-LALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|++|++. .|.+| . ...|.+..++. +|+.++|+...++|+..
T Consensus 17 ~~A~~~~~~al~~-----~p~~~---~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGK---DEAYYLMGNAYRK-LGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTH---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 4677888887753 44554 3 55667777766 79999999888887653
No 93
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=72.53 E-value=22 Score=27.45 Aligned_cols=47 Identities=17% Similarity=0.073 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 34566777777654 33333 334444555554 7888888877777765
No 94
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=72.02 E-value=6.5 Score=28.07 Aligned_cols=47 Identities=11% Similarity=-0.158 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|.+.|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 4567777777654 34443 345566666554 79999998888887754
No 95
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=71.02 E-value=28 Score=25.54 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=48.8
Q ss_pred hhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhh-hhHHHHHHHHHhCChHHHHHH
Q 027732 122 ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGL-ALNFSVFYYEILNSPDRACNL 200 (219)
Q Consensus 122 eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL-~LN~SVF~yEi~~~~~~A~~l 200 (219)
...+..+-..|..|...-+ .+.|...|++|+++++ ..+ .+|...+. ..|.+..++. +|++++|...
T Consensus 63 ~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~ 129 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALH-FGDLAGARQE 129 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHH-hCCHHHHHHH
Confidence 3445555666766655432 3568999999999986 343 34534444 4455555554 8999999999
Q ss_pred HHHHHHHH
Q 027732 201 AKQVRVAA 208 (219)
Q Consensus 201 Ak~Afd~A 208 (219)
.++|++-+
T Consensus 130 ~~~al~~~ 137 (203)
T 3gw4_A 130 YEKSLVYA 137 (203)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888654
No 96
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=70.85 E-value=31 Score=25.90 Aligned_cols=29 Identities=3% Similarity=-0.127 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
.+..++....+.|+|++++.+.++.+...
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 68 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFF 68 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45677888889999999999999999764
No 97
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=69.60 E-value=10 Score=26.30 Aligned_cols=15 Identities=20% Similarity=-0.055 Sum_probs=6.8
Q ss_pred hCChHHHHHHHHHHH
Q 027732 191 LNSPDRACNLAKQVR 205 (219)
Q Consensus 191 ~~~~~~A~~lAk~Af 205 (219)
+|+.++|+...++|+
T Consensus 51 ~~~~~~A~~~~~~al 65 (126)
T 3upv_A 51 LMSFPEAIADCNKAI 65 (126)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHH
Confidence 344444444444443
No 98
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=69.50 E-value=9.9 Score=26.36 Aligned_cols=25 Identities=16% Similarity=0.081 Sum_probs=12.0
Q ss_pred hHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 181 LNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 181 LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.+..++. +|+.++|+...++|+.
T Consensus 81 ~~l~~~~~~-~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 81 FFLGQCQLE-MESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 334444333 4555555555555544
No 99
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=69.50 E-value=37 Score=26.24 Aligned_cols=64 Identities=13% Similarity=0.038 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIE 73 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ie 73 (219)
+.+..+|...-+.|+|++++..+++++...+..+...+-...+..+|-. .+....|...+..+.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHH
Confidence 4566788889999999999999999998762233444555555656533 355555655555443
No 100
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=69.41 E-value=30 Score=25.22 Aligned_cols=45 Identities=11% Similarity=-0.023 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 153 STLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 153 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 99 ~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 99 QTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 456666666543 23332 334455555554 5777776666666543
No 101
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=69.29 E-value=17 Score=28.49 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhh-----hhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLG-----LALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-----L~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
-+.|..+|++|+++.-. .|+..++.+. ...|-+.-+.. +|+.++|+.-..+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 45799999999998743 3333333333 66777777666 7999999988877765
No 102
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=69.01 E-value=16 Score=26.04 Aligned_cols=47 Identities=4% Similarity=-0.083 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.|.+.|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 34688889998864 44544 445666666665 8999999988888765
No 103
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=69.00 E-value=17 Score=24.48 Aligned_cols=47 Identities=9% Similarity=0.043 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|++|+++ .|.+ .....+.+..++. +|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTF---IKGYTRKAAALEA-MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence 4678888888764 3333 3455666666665 79999999998888764
No 104
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=68.81 E-value=28 Score=24.66 Aligned_cols=165 Identities=15% Similarity=0.084 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVI 88 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i 88 (219)
.-+..++....+.|+|++++..++++++.. +. +..-...+..+|-. .+....+...+....+.... .........
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a 83 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDAD--AF-DVDVALHLGIAYVK-TGAVDRGTELLERSLADAPD-NVKVATVLG 83 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTT--SC-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT-CHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--cc-ChHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCC-CHHHHHHHH
Confidence 345567888889999999999999888664 33 33434444444432 34444555554432222110 000111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHh
Q 027732 89 KEYRS-KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALA 167 (219)
Q Consensus 89 ~~y~~-ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 167 (219)
.-|.. .=-++-....+.++.+ -|. + ..+ +...|..|.-. |+ .+.|...|++++..
T Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~-----~~~--~--~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~--- 139 (186)
T 3as5_A 84 LTYVQVQKYDLAVPLLIKVAEA-----NPI--N--FNV--RFRLGVALDNL-----GR-----FDEAIDSFKIALGL--- 139 (186)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH-----CTT--C--HHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CcH--h--HHH--HHHHHHHHHHc-----Cc-----HHHHHHHHHHHHhc---
Confidence 11111 1111222222222222 121 1 112 22334333211 11 35678888888764
Q ss_pred cCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 168 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 168 ~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
.|.+| ....+.+..++. .|+.++|....+++++..
T Consensus 140 --~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 140 --RPNEG---KVHRAIAFSYEQ-MGRHEEALPHFKKANELD 174 (186)
T ss_dssp --CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred --Cccch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHcC
Confidence 23333 344555555554 799999999988887654
No 105
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=68.39 E-value=3.6 Score=28.68 Aligned_cols=49 Identities=10% Similarity=-0.043 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 153 STLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 153 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 8 ~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 8 QAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 46778888875 334467777778888888876 79999999999888764
No 106
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=68.27 E-value=12 Score=25.11 Aligned_cols=25 Identities=16% Similarity=0.010 Sum_probs=13.8
Q ss_pred hHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 181 LNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 181 LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.+..++. +|+.++|+...++++.
T Consensus 84 ~~~~~~~~~-~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 84 GRMGLALSS-LNKHVEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hCCHHHHHHHHHHHHh
Confidence 444444443 5666666666665554
No 107
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=67.91 E-value=12 Score=24.48 Aligned_cols=27 Identities=11% Similarity=-0.248 Sum_probs=14.9
Q ss_pred hhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 179 LALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 179 L~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
...+.+..++. +|+.++|....+++..
T Consensus 74 ~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 100 (118)
T 1elw_A 74 GYSRKAAALEF-LNRFEEAKRTYEEGLK 100 (118)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 34455544443 5777776666655543
No 108
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=67.68 E-value=27 Score=24.04 Aligned_cols=54 Identities=17% Similarity=-0.011 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
..|..-|++|+......- ...+.+-.+..++++-+|. +|+.++|+...++|+.-
T Consensus 22 ~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhc
Confidence 357788888887664221 1123444555666666665 89999999999998743
No 109
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=67.13 E-value=55 Score=27.33 Aligned_cols=53 Identities=6% Similarity=0.078 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|.+.|++|+++++..- +|.......|.+..++. +|+.++|+...++|+.-
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 4578999999999987543 34444455566666665 89999999999988764
No 110
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=66.96 E-value=9.3 Score=28.23 Aligned_cols=48 Identities=21% Similarity=0.319 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
-+.|.++|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++...
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~~ 68 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVVL 68 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHhc
Confidence 35688888888864 44554 334455555554 78888888887777543
No 111
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=66.29 E-value=14 Score=24.49 Aligned_cols=26 Identities=19% Similarity=0.197 Sum_probs=14.2
Q ss_pred hhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 180 ALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 180 ~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
..+.+..++. .|+.++|....+++++
T Consensus 80 ~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 80 WYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 3444444443 5666666666655554
No 112
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=65.37 E-value=27 Score=23.65 Aligned_cols=48 Identities=15% Similarity=-0.031 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|...|++|+.+ .|.++ ....+.+..+.. +|+.++|+...++|+.-
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 34688888888864 34443 344566666665 79999999998888764
No 113
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=64.54 E-value=21 Score=23.33 Aligned_cols=29 Identities=10% Similarity=-0.002 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
.+..+|....+.|+|++++.++.+.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 34 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLD 34 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 44455666666666666666666655443
No 114
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=64.36 E-value=45 Score=25.41 Aligned_cols=60 Identities=7% Similarity=-0.063 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSI 72 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~i 72 (219)
.-+..+|.+..+.|+|++++++++++++.. +. +..-...+..+|-. .+....+.+.+...
T Consensus 72 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~ 131 (252)
T 2ho1_A 72 DAHAALAVVFQTEMEPKLADEEYRKALASD--SR-NARVLNNYGGFLYE-QKRYEEAYQRLLEA 131 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHC--cC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 456678899999999999999999999876 43 34445555555543 45555666666543
No 115
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=63.75 E-value=14 Score=27.09 Aligned_cols=47 Identities=9% Similarity=0.041 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|.+.|++|+++ .|.|| ....|.+..|+. +|+.++|+..-++|++-
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYEL-EENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCchHHHHHHHHHHHHh
Confidence 4577777777654 34444 233444444444 68888887777766653
No 116
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=63.69 E-value=41 Score=24.63 Aligned_cols=74 Identities=7% Similarity=-0.151 Sum_probs=47.8
Q ss_pred hHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHH
Q 027732 123 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAK 202 (219)
Q Consensus 123 skvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk 202 (219)
..+..+-..|..|...-+ .+.|...|++|+.++.. . .+|...+.+++.-...|.-.|++++|....+
T Consensus 105 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 171 (203)
T 3gw4_A 105 AASANAYEVATVALHFGD----------LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 445555556665544422 45689999999998863 2 2344455544444444445899999999988
Q ss_pred HHHHHHH
Q 027732 203 QVRVAAL 209 (219)
Q Consensus 203 ~Afd~Ai 209 (219)
+|++-+-
T Consensus 172 ~al~~~~ 178 (203)
T 3gw4_A 172 RARDIFA 178 (203)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877543
No 117
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=63.55 E-value=26 Score=23.18 Aligned_cols=26 Identities=19% Similarity=0.212 Sum_probs=13.3
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhc
Q 027732 12 VYMAKLAEQAERYEEMVEFMEKVAKT 37 (219)
Q Consensus 12 i~~AklaeqaeRy~dm~~~mk~~i~~ 37 (219)
..+|.+....|+|++++.++++++..
T Consensus 16 ~~~~~~~~~~~~~~~A~~~~~~~~~~ 41 (131)
T 2vyi_A 16 KTEGNEQMKVENFEAAVHFYGKAIEL 41 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 34445555555555555555554443
No 118
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=63.54 E-value=21 Score=26.09 Aligned_cols=47 Identities=6% Similarity=-0.003 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|..+|++|+.+ .|.|| ...+|.++.|+. +|+.++|+...++|+.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEP---RFPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCc---hHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5688999998764 45665 345677777776 79999999888877653
No 119
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=63.33 E-value=63 Score=26.68 Aligned_cols=44 Identities=11% Similarity=0.201 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAY 55 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvay 55 (219)
+-+..++.+..+.|+|++++.++++.+... |+. .+-...+..+|
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~-~~~~~~l~~~~ 111 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALRLK--PDF-IDGYINLAAAL 111 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--TTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcC--cch-HHHHHHHHHHH
Confidence 456788999999999999999999999876 553 33334444443
No 120
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=62.84 E-value=9 Score=26.64 Aligned_cols=30 Identities=10% Similarity=0.021 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
.-++.++.++.+.|+|++++.+..++.+.+
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 345677777777777777777777777665
No 121
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=61.56 E-value=27 Score=24.64 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
+.+..+|....+.|+|++++.++++++...
T Consensus 14 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 43 (166)
T 1a17_A 14 EELKTQANDYFKAKDYENAIKFYSQAIELN 43 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 345667777778888888888888877664
No 122
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=61.38 E-value=24 Score=28.52 Aligned_cols=52 Identities=13% Similarity=0.023 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHH-HHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRA-CNLAKQVR 205 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A-~~lAk~Af 205 (219)
-+.|...|++|++++.. ..++..++.+++.--..|.-+|+.++| ....++|+
T Consensus 212 y~~Al~~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 212 YEESLYQVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 45799999999999853 233445555544444445558999999 44455554
No 123
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=61.32 E-value=1.2e+02 Score=29.07 Aligned_cols=46 Identities=9% Similarity=0.174 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKN 57 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn 57 (219)
+-+..++.+..+.|+|++++.+.++.++.+ ++. .+=.+-|..+|..
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~--P~~-~~a~~nLg~~l~~ 89 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRIS--PTF-ADAYSNMGNTLKE 89 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCC-HHHHHHHHHHHHH
Confidence 446678999999999999999999999887 554 4444555555543
No 124
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=60.73 E-value=20 Score=23.61 Aligned_cols=27 Identities=15% Similarity=0.259 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhc
Q 027732 11 NVYMAKLAEQAERYEEMVEFMEKVAKT 37 (219)
Q Consensus 11 li~~AklaeqaeRy~dm~~~mk~~i~~ 37 (219)
+..++.+..+.|+|++++..+++++..
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~ 38 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL 38 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555555555555555555555443
No 125
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=60.58 E-value=8.7 Score=33.35 Aligned_cols=54 Identities=15% Similarity=0.140 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhc--------CCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAE--------LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~--------L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
+.|...|++|+++.... ....+|....+.+|.+..|+. +++.++|+...++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 45777888887765421 011456666777788777775 6888888887777764
No 126
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=60.47 E-value=16 Score=27.60 Aligned_cols=24 Identities=8% Similarity=-0.058 Sum_probs=11.0
Q ss_pred hHHHHHHHHHhCChHHHHHHHHHHH
Q 027732 181 LNFSVFYYEILNSPDRACNLAKQVR 205 (219)
Q Consensus 181 LN~SVF~yEi~~~~~~A~~lAk~Af 205 (219)
++.+..|+. +|+.++|+...++|+
T Consensus 126 ~~lg~~~~~-~~~~~~A~~~~~~al 149 (198)
T 2fbn_A 126 YKLGVANMY-FGFLEEAKENLYKAA 149 (198)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cccHHHHHHHHHHHH
Confidence 344444333 455555555444443
No 127
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.47 E-value=30 Score=23.76 Aligned_cols=28 Identities=4% Similarity=-0.121 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKT 37 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~ 37 (219)
.+..+|....+.|+|++++.++++.++.
T Consensus 30 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 57 (148)
T 2dba_A 30 QLRKEGNELFKCGDYGGALAAYTQALGL 57 (148)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3344444444455555555555544443
No 128
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=60.16 E-value=28 Score=24.74 Aligned_cols=48 Identities=17% Similarity=0.117 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|..+|++|+.+ .|.||. ..+|.+..++. +|+.++|+...++++.-
T Consensus 68 ~~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 68 YEQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688899988764 466663 34666776665 89999999988887654
No 129
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=60.10 E-value=16 Score=28.13 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 8 REENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 8 r~~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
-+.++..+...-+.|+|++++.++.+++..+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~ 34 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALN 34 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 4678889999999999999999999999876
No 130
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=59.79 E-value=46 Score=23.96 Aligned_cols=46 Identities=9% Similarity=-0.167 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
+.|...|++|+++ .|.+| ...++.+..|+. +|+.++|+...++|+.
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHh
Confidence 4677778888765 45554 445566666665 7999999988888764
No 131
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=59.28 E-value=33 Score=23.51 Aligned_cols=24 Identities=8% Similarity=0.019 Sum_probs=10.1
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHH
Q 027732 12 VYMAKLAEQAERYEEMVEFMEKVA 35 (219)
Q Consensus 12 i~~AklaeqaeRy~dm~~~mk~~i 35 (219)
..++......|+|++++.++++.+
T Consensus 13 ~~~g~~~~~~~~~~~A~~~~~~al 36 (137)
T 3q49_B 13 KEQGNRLFVGRKYPEAAACYGRAI 36 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHH
Confidence 334444444444444444444433
No 132
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=59.13 E-value=20 Score=26.85 Aligned_cols=47 Identities=13% Similarity=0.025 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
-+.|..+|++|+.+ .|.||. ...|.++.|.. +|++++|+..-++|+.
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 45689999999864 466663 45677777665 8999999988777764
No 133
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=58.48 E-value=21 Score=29.48 Aligned_cols=69 Identities=17% Similarity=0.168 Sum_probs=46.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhh----hhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027732 41 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (219)
Q Consensus 41 ~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq----~~~~~~~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~L 114 (219)
|+||.|-|.=|....|...-.-|-|.|-+..--. +.+..+ ..-++-.++.++|+..+.++.+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998888888888752111 101111 01234455667777777777777777654
No 134
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=57.92 E-value=82 Score=26.29 Aligned_cols=29 Identities=7% Similarity=0.013 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
-+..++.+..+.|+|++++.+.++.+...
T Consensus 149 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~ 177 (336)
T 1p5q_A 149 IVKERGTVYFKEGKYKQALLQYKKIVSWL 177 (336)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 34567888889999999999999999876
No 135
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=57.79 E-value=62 Score=24.86 Aligned_cols=49 Identities=6% Similarity=-0.155 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNS---PDRACNLAKQVRVAA 208 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~---~~~A~~lAk~Afd~A 208 (219)
.+.|.+.|++|+++ .|.+| ...++.+..++. +++ .++|+...++|++-.
T Consensus 158 ~~~A~~~~~~a~~~-----~p~~~---~~~~~~~~~~~~-~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 158 YVKADSSFVKVLEL-----KPNIY---IGYLWRARANAA-QDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cCcchhhHHHHHHHHHHHHHH
Confidence 45677777777654 34443 223334444443 466 666777777666554
No 136
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=57.17 E-value=9.9 Score=25.80 Aligned_cols=47 Identities=17% Similarity=0.091 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|++|+. +.|.+ .....+.+..++. .++.++|+...++++..
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 357778888764 33444 3455666666655 79999999988888764
No 137
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=56.95 E-value=80 Score=25.88 Aligned_cols=56 Identities=11% Similarity=-0.022 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....++++-+
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHh
Confidence 46888899999888754444556665566667777776 699999988888877543
No 138
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=56.91 E-value=1e+02 Score=27.09 Aligned_cols=46 Identities=7% Similarity=-0.012 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNV 58 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~ 58 (219)
+-+..++.+..+.|+|++++.++++.++.+ |. ..-...+..+|...
T Consensus 138 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~--~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 138 EAWNQLGEVYWKKGDVTSAHTCFSGALTHC--KN--KVSLQNLSMVLRQL 183 (474)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTC--CC--HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CC--HHHHHHHHHHHHHh
Confidence 456688999999999999999999999887 66 56667777777654
No 139
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=55.42 E-value=35 Score=25.46 Aligned_cols=47 Identities=13% Similarity=0.096 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.|...|++|+.+ .|.+ .....|.+..++. +|+.++|+...++|++
T Consensus 53 ~~~A~~~~~~al~~-----~~~~---~~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 53 MTEAEKAFTRSINR-----DKHL---AVAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----Cccc---hHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 35688889998865 2344 3455677777776 7999999998888876
No 140
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=55.35 E-value=24 Score=25.02 Aligned_cols=48 Identities=13% Similarity=0.055 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
+.|.+.|++++.. .|.+| ....+.+..++. .|+.++|+...++++...
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~ 140 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALDN-LGRFDEAIDSFKIALGLR 140 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHHH-cCcHHHHHHHHHHHHhcC
Confidence 4577788887764 33343 344566665554 799999999998887653
No 141
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=54.25 E-value=45 Score=26.80 Aligned_cols=70 Identities=16% Similarity=0.182 Sum_probs=47.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027732 41 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (219)
Q Consensus 41 ~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~L 114 (219)
|+||.|-|.=|..-.|...-.-|-+.|.+..--...-.+. . +.-++-..+.++|+..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~-~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEEL-E---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-T---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888842111111111 0 02245556677788877777777777654
No 142
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=54.04 E-value=46 Score=22.20 Aligned_cols=57 Identities=9% Similarity=0.083 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRII 69 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l 69 (219)
.-+..+|.+..+.|+|++++.+++++++.+ |... .=...+..+|.. .+..-.|...+
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~-~a~~~lg~~~~~-~g~~~~A~~~~ 64 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETD--PDYV-GTYYHLGKLYER-LDRTDDAIDTY 64 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCT-HHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCcH-HHHHHHHHHHHH-cCCHHHHHHHH
Confidence 456788999999999999999999999987 6543 345556666644 34444444444
No 143
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=54.03 E-value=22 Score=27.73 Aligned_cols=54 Identities=15% Similarity=-0.016 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHh--cCCCCCcchh-hhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALA--ELAPTHPIRL-GLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~--~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
+.|..+|++|+++-.. ++.|.++--+ .-..|-++-+.. +|+.++|+.--++|+.
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDG-LGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 3588889999887322 4566554211 011344444443 8999999887777654
No 144
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=53.94 E-value=27 Score=19.60 Aligned_cols=27 Identities=33% Similarity=0.562 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027732 86 SVIKEYRSKIENELSKICDGILSLLES 112 (219)
Q Consensus 86 ~~i~~y~~ki~~EL~~~c~eii~lid~ 112 (219)
+.++.||.+|.+.|..+.+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 457889999999999999988777643
No 145
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=53.60 E-value=38 Score=24.56 Aligned_cols=28 Identities=21% Similarity=0.345 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 11 NVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 11 li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
...+|++..+.|+|++++++++++++.+
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~ 61 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQ 61 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999887
No 146
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=53.54 E-value=46 Score=30.65 Aligned_cols=26 Identities=23% Similarity=0.336 Sum_probs=21.1
Q ss_pred hhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHH
Q 027732 130 MKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIA 165 (219)
Q Consensus 130 mkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 165 (219)
--||..||...+ ..|...|++|..+.
T Consensus 157 ~LGDL~RY~~~~----------~~A~~~Y~~A~~~~ 182 (497)
T 1ya0_A 157 HLGDIARYRNQT----------SQAESYYRHAAQLV 182 (497)
T ss_dssp HHHHHHHHTTCH----------HHHHHHHHHHHHHC
T ss_pred HcccHHHHHHHH----------HHHHHHHHHHHHhC
Confidence 379999999764 57899999998654
No 147
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=53.42 E-value=6.6 Score=33.35 Aligned_cols=55 Identities=20% Similarity=0.198 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHhcC-------CCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAEL-------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L-------~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.|..+|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+.
T Consensus 163 ~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 163 YKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 3457777777776532110 00123445666777776665 6888888777777654
No 148
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=53.38 E-value=48 Score=22.24 Aligned_cols=59 Identities=8% Similarity=0.078 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 027732 8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (219)
Q Consensus 8 r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~ 70 (219)
-.-+..+|.+..+.|+|++++.++++++..+ +.. .+-...+..+|.. .+....+...+.
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~-~~~~~~la~~~~~-~g~~~~A~~~~~ 77 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFD--PTY-SVAWKWLGKTLQG-QGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTC-HHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHC--CCc-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3456778999999999999999999999886 443 4455666666654 355555555554
No 149
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=53.14 E-value=14 Score=32.92 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCC--------CCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAP--------THPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~p--------t~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
-+.|...|++|+++... .+. .+|.+..+.+|.+..|+. +++.++|+...++|+.
T Consensus 284 ~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 284 YMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 34688888888876421 110 134567788888888876 7999999888888765
No 150
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=51.87 E-value=27 Score=23.08 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=13.9
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhc
Q 027732 13 YMAKLAEQAERYEEMVEFMEKVAKT 37 (219)
Q Consensus 13 ~~AklaeqaeRy~dm~~~mk~~i~~ 37 (219)
.++.+..+.|+++++...++++++.
T Consensus 6 ~l~~~~~~~~~~~~A~~~~~~~~~~ 30 (136)
T 2fo7_A 6 NLGNAYYKQGDYDEAIEYYQKALEL 30 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHc
Confidence 3455555556666666665555543
No 151
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=51.85 E-value=31 Score=30.87 Aligned_cols=27 Identities=11% Similarity=-0.207 Sum_probs=13.9
Q ss_pred hhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 179 LALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 179 L~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
...|.+..|+. +|+.++|....++|+.
T Consensus 76 ~~~~lg~~~~~-~g~~~eA~~~~~~al~ 102 (477)
T 1wao_1 76 GYYRRAASNMA-LGKFRAALRDYETVVK 102 (477)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 33444444443 5666666655555544
No 152
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=51.24 E-value=31 Score=25.14 Aligned_cols=47 Identities=13% Similarity=0.026 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|++|+. +.|.+|. ...|.++.++. +|+.++|+...++|+.-
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSR---FFLGLGACRQA-MGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHH---HHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 457777777764 3556653 33566666665 79999999988888654
No 153
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=50.89 E-value=35 Score=27.52 Aligned_cols=69 Identities=20% Similarity=0.303 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhh----hhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027732 41 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQK----EESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (219)
Q Consensus 41 ~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~----~~~~~~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~L 114 (219)
|+||.|-|.=|..-.|...-.-|-+.|.+..--.. .+..+ ..-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999888888888887421110 00001 11244455667777777777777777654
No 154
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=49.68 E-value=44 Score=25.96 Aligned_cols=70 Identities=20% Similarity=0.204 Sum_probs=40.8
Q ss_pred hhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCc---chhhhhhHHHHHH----HHHhCChHHHHHHHHH
Q 027732 131 KGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHP---IRLGLALNFSVFY----YEILNSPDRACNLAKQ 203 (219)
Q Consensus 131 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgL~LN~SVF~----yEi~~~~~~A~~lAk~ 203 (219)
.|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|+..-++
T Consensus 42 ~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~k 116 (158)
T 1zu2_A 42 WGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQ 116 (158)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHH
Confidence 3445555566667777677889999999999864 44554 3355444321111 1112466677665555
Q ss_pred HH
Q 027732 204 VR 205 (219)
Q Consensus 204 Af 205 (219)
|+
T Consensus 117 Al 118 (158)
T 1zu2_A 117 AV 118 (158)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 155
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=49.06 E-value=37 Score=27.39 Aligned_cols=69 Identities=16% Similarity=0.204 Sum_probs=45.3
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhh----hhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027732 41 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQK----EESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (219)
Q Consensus 41 ~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~----~~~~~~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~L 114 (219)
|+||.|-|.=|....|...-.-|-+.|.+..--.. .+..+ ..-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999888888888887421110 01011 01234455667777777777777776654
No 156
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=48.52 E-value=38 Score=27.26 Aligned_cols=69 Identities=19% Similarity=0.163 Sum_probs=45.5
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhh----hhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027732 41 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (219)
Q Consensus 41 ~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq----~~~~~~~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~L 114 (219)
|+||.|-|.=|..-.|...-.-|-+.|.+..--. +.+..+ ..-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 001111 01234455667777777777777777654
No 157
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=48.09 E-value=31 Score=28.06 Aligned_cols=49 Identities=16% Similarity=0.017 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHh--cCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 027732 156 LAYKSAQDIALA--ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAA 208 (219)
Q Consensus 156 ~aY~~A~~~a~~--~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~A 208 (219)
.-|++|....++ .+.|.+ .....|.+..|+. +|+.++|....++|+.-.
T Consensus 52 ~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQS---VKAHFFLGQCQLE-MESYDEAIANLQRAYSLA 102 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 345666665543 333444 3444555555554 678888877777776543
No 158
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=47.51 E-value=12 Score=26.06 Aligned_cols=27 Identities=19% Similarity=0.133 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAK 36 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~ 36 (219)
+++..|=-.+++|+|++++.+.++.++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344555556888999999998887764
No 159
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=47.26 E-value=1.1e+02 Score=24.66 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
.+.|...|++|+... .++|.++ ..+-.++.-|+.. .|+.+.|..+.++|.+.
T Consensus 219 ~~~A~~~~~~al~~~--~l~p~~~--~~l~~~~~~~~~~-~g~~~~a~~~~~~a~~~ 270 (308)
T 2ond_A 219 DNNTRVLFERVLTSG--SLPPEKS--GEIWARFLAFESN-IGDLASILKVEKRRFTA 270 (308)
T ss_dssp HHHHHHHHHHHHHSS--SSCGGGC--HHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--CCCHHHH--HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 457889999997531 3565433 4456777778776 69999999887777653
No 160
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=47.06 E-value=41 Score=27.04 Aligned_cols=69 Identities=19% Similarity=0.181 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhh----hhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027732 41 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQ----KEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (219)
Q Consensus 41 ~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq----~~~~~~~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~L 114 (219)
|+||.|-|.=|..-.|...-.-|-+.|.+..--. +.+..+ ..-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888888742111 111111 01234445666777777777777666554
No 161
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=46.39 E-value=42 Score=23.44 Aligned_cols=14 Identities=7% Similarity=-0.154 Sum_probs=6.8
Q ss_pred hCChHHHHHHHHHH
Q 027732 191 LNSPDRACNLAKQV 204 (219)
Q Consensus 191 ~~~~~~A~~lAk~A 204 (219)
+|+.++|+...++|
T Consensus 64 ~g~~~~A~~~~~~a 77 (121)
T 1hxi_A 64 NEKDGLAIIALNHA 77 (121)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 45555555444444
No 162
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=46.05 E-value=36 Score=27.40 Aligned_cols=73 Identities=19% Similarity=0.191 Sum_probs=46.2
Q ss_pred CCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027732 41 EELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIENELSKICDGILSLLESHL 114 (219)
Q Consensus 41 ~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~~y~~ki~~EL~~~c~eii~lid~~L 114 (219)
|+||.|-|.=|....|...-.-|-+.|.+..--...- +........-++-.++.++++..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111100 000000011244556677777777777777777654
No 163
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=45.70 E-value=96 Score=25.07 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.|...|++|++ ++|.+|-. +-+|++.|+.. .|+.++|+.+-++|..
T Consensus 115 ~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~-~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 115 YEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARR-AEGIKSGRMIFKKARE 162 (308)
T ss_dssp HHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHH-HHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 3456666666653 56666531 56677777665 5777777655555543
No 164
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=45.38 E-value=82 Score=22.57 Aligned_cols=29 Identities=7% Similarity=0.116 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
.+..++.+..+.|+|++++.++.+.++.+
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~ 41 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIA 41 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34455556666666666666666666554
No 165
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=43.26 E-value=39 Score=25.17 Aligned_cols=55 Identities=9% Similarity=-0.035 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHhcC--------CCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAEL--------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L--------~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.|.+.|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+.
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3568888888886432100 00233444566777777776 7999999988877753
No 166
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=43.21 E-value=54 Score=22.81 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=25.7
Q ss_pred CCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 027732 3 PTDSSREENVYMAKLAEQAERYEEMVEFMEKVAK 36 (219)
Q Consensus 3 ~m~~~r~~li~~AklaeqaeRy~dm~~~mk~~i~ 36 (219)
|-+..--+++-.|--.+++|+|++++.+-++.++
T Consensus 11 ~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 11 PQSTAAATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3333345677777777999999999999888775
No 167
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=43.17 E-value=72 Score=21.34 Aligned_cols=63 Identities=3% Similarity=0.038 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSI 72 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~i 72 (219)
+-+..++.+..+.|+|++++.++.+++...+......+-...+..+|-. .+....+...+..+
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~ 102 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQV 102 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 4566789999999999999999999998762122224445566666653 45555565555443
No 168
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=40.11 E-value=1.1e+02 Score=22.56 Aligned_cols=45 Identities=18% Similarity=0.022 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYK 56 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayK 56 (219)
+-+..++....+.|+|++++.++++++..+ | -+.+=...+..+|-
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~--P-~~~~~~~~lg~~~~ 81 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYD--F-YNVDYIMGLAAIYQ 81 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--C-CCHHHHHHHHHHHH
Confidence 445566777777777777777777777664 3 23444455555553
No 169
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=40.09 E-value=91 Score=21.57 Aligned_cols=59 Identities=12% Similarity=0.003 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISS 71 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ 71 (219)
+....++....+.|+|++++..+++++..+ |. +.+=...+..++-. .+....|...+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 76 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKE--PE-REEAWRSLGLTQAE-NEKDGLAIIALNH 76 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHC--CC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 467788999999999999999999999876 44 45666677777653 4555555555543
No 170
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=39.42 E-value=60 Score=23.52 Aligned_cols=49 Identities=14% Similarity=0.206 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCCh--HHHHHHHHHHHHH
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSP--DRACNLAKQVRVA 207 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~--~~A~~lAk~Afd~ 207 (219)
.+.|..+|++|+.+. |.+| ....+.+..+|.-.|+. ++|....++++..
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 356889999998764 3443 34566677755557887 9999888887654
No 171
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=38.95 E-value=77 Score=23.15 Aligned_cols=33 Identities=24% Similarity=0.140 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEEL 43 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L 43 (219)
+-+..++.+..+.|+|++++..+.+++..+ |..
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~--p~~ 141 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVN--LGA 141 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--TTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhC--ccc
Confidence 445667788888888888888888888766 544
No 172
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=38.01 E-value=58 Score=28.76 Aligned_cols=52 Identities=10% Similarity=-0.123 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHHHHHh
Q 027732 151 AESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVAALLF 211 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~Ai~~ 211 (219)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~ 113 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDK 113 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHH
Confidence 45678888888642 23 345788888899999999999999999999999764
No 173
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=37.04 E-value=47 Score=24.25 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhh
Q 027732 22 ERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVI 59 (219)
Q Consensus 22 eRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i 59 (219)
++|+.+++.++.+-..+ ...++++++-.|---||...
T Consensus 10 ~~F~~A~~~vk~l~~~g-~~~ps~e~~L~LYaLyKQAt 46 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNG-SYRPSYEEMLRFYSYYKQAT 46 (106)
T ss_dssp HHHHHHHHHHHHSCSSC-SCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccC-CCCCCHHHHHHHHHHHhhhc
Confidence 56889999998865432 13689999998888888875
No 174
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=36.94 E-value=82 Score=20.18 Aligned_cols=28 Identities=14% Similarity=0.095 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 11 NVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 11 li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
.+.+|....+.|+|++++..++++++.+
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~ 30 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTE 30 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 3567888889999999999999999876
No 175
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=36.18 E-value=2.1e+02 Score=24.63 Aligned_cols=57 Identities=12% Similarity=0.117 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhh-hhhHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGA-RRASWRII 69 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~-~R~s~R~l 69 (219)
+-+.+++.+..+.|+|++++....+++..+ |.. .+=.+.+..+|... +. ...+...+
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~--P~~-~~a~~~~g~~l~~~-g~d~~eAl~~~ 155 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELN--AAN-YTVWHFRRVLLKSL-QKDLHEEMNYI 155 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHC--TTC-HHHHHHHHHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhC--ccC-HHHHHHHHHHHHHc-ccCHHHHHHHH
Confidence 445678888889999999999999999887 543 44444555555442 32 44444444
No 176
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=35.94 E-value=50 Score=21.42 Aligned_cols=26 Identities=12% Similarity=0.091 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHh
Q 027732 11 NVYMAKLAEQAERYEEMVEFMEKVAK 36 (219)
Q Consensus 11 li~~AklaeqaeRy~dm~~~mk~~i~ 36 (219)
+..++......|+|++++....+.++
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 7 QKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 33444444444555555555554443
No 177
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=35.73 E-value=84 Score=19.93 Aligned_cols=25 Identities=24% Similarity=0.352 Sum_probs=12.6
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhc
Q 027732 13 YMAKLAEQAERYEEMVEFMEKVAKT 37 (219)
Q Consensus 13 ~~AklaeqaeRy~dm~~~mk~~i~~ 37 (219)
.++.+..+.|+|++++.+++++++.
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~ 35 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQL 35 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3444444555555555555555544
No 178
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=34.41 E-value=67 Score=28.60 Aligned_cols=14 Identities=21% Similarity=0.586 Sum_probs=5.6
Q ss_pred CCHHHHHHHHHHHH
Q 027732 22 ERYEEMVEFMEKVA 35 (219)
Q Consensus 22 eRy~dm~~~mk~~i 35 (219)
|+|++++.+.++.+
T Consensus 20 g~~~~A~~~~~~Al 33 (477)
T 1wao_1 20 KDYENAIKFYSQAI 33 (477)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 34444444433333
No 179
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=34.02 E-value=2.3e+02 Score=24.39 Aligned_cols=48 Identities=8% Similarity=0.074 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhh
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIG 60 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~ 60 (219)
-+..++.+..+.|+|++++.++.++++.+ +. +..=.+-+..+|...-+
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~al~l~--P~-~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQLLKED--VR-NNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHC--TT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHhcC
Confidence 34566677777777777777777777765 33 34445555555555333
No 180
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=33.79 E-value=88 Score=27.53 Aligned_cols=19 Identities=11% Similarity=-0.060 Sum_probs=10.5
Q ss_pred HHHhCChHHHHHHHHHHHH
Q 027732 188 YEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 188 yEi~~~~~~A~~lAk~Afd 206 (219)
|...|++++|+.+-.+|+.
T Consensus 401 ~~~~~~~~~A~~~~e~al~ 419 (530)
T 2ooe_A 401 YYCSKDKSVAFKIFELGLK 419 (530)
T ss_dssp HHHTCCHHHHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHHHHHH
Confidence 3446666666665555543
No 181
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=33.74 E-value=2e+02 Score=23.60 Aligned_cols=111 Identities=21% Similarity=0.292 Sum_probs=63.2
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHHHHHHH
Q 027732 14 MAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRS 93 (219)
Q Consensus 14 ~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~~y~~ 93 (219)
.|+|.+....|-.|++-+|.-.. +..|..|.=.-||=.+.. +|.+. ..+.++..=+..-.
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~-------nf~e~RLiYDHYKlKvdE----------LEK~~---KdSeKI~RNQsKLs 159 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK-------ETDKYRERYDHYKVKLDN----------LEKKN---KDQERIERNQQKFK 159 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH----------HHHHT---CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHhHHH----------HHhcc---chHHHHHHhHHHhh
Confidence 47888888888888887765321 144666666677765443 22211 11222222222223
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHh
Q 027732 94 KIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALA 167 (219)
Q Consensus 94 ki~~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 167 (219)
+-+.--..+|-|+|+-.++ +-|.|+|.++|..+. +=..+--|-+|++.|..
T Consensus 160 sAEtaYkqvcsDiInkMnk-----------------ll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 160 DAEAAYSSVCADLIQKMET-----------------VWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 3344556677777776654 447788888886542 22345558888887754
No 182
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=33.44 E-value=68 Score=26.21 Aligned_cols=47 Identities=9% Similarity=0.005 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|...|+++++. .|.+ ..+..|.++.+.. +|+.++|...-++|+..
T Consensus 183 ~eA~~~~~~~l~~-----~p~~---~~~~~~la~~~~~-~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPT---LLLLNGQAACHMA-QGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 3455555555432 3333 3344555665554 79999998888887764
No 183
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=33.36 E-value=2.5e+02 Score=24.76 Aligned_cols=30 Identities=3% Similarity=-0.207 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
+-+..+|.+..+.|+|+++++++++.++.+
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 53 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALH 53 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 456678888889999999999999998876
No 184
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=30.71 E-value=93 Score=24.53 Aligned_cols=75 Identities=17% Similarity=0.174 Sum_probs=48.6
Q ss_pred CCCCchhHHHHHHhhhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCC----cchhhhhhHHHHHHHHHhC
Q 027732 117 SASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTH----PIRLGLALNFSVFYYEILN 192 (219)
Q Consensus 117 ~~~~~eskvfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~----pirLgL~LN~SVF~yEi~~ 192 (219)
.+.++++-.-|+++--+. =.+..+ ...++-.+.|++|.. ++||+. .-+.-|=++|+.| -++ +
T Consensus 9 ~p~~yd~W~~yl~llE~~------g~p~~d--~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~ 74 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKN------SVPLSD--ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-Q 74 (161)
T ss_dssp -CCSHHHHHHHHHHHHHH------TCSCCH--HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-H
T ss_pred CCCCHHHHHHHHHHHHHc------CCCchh--hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-c
Confidence 455677777777663221 001112 567778899998874 466653 3445588999999 455 9
Q ss_pred ChHHHHHHHHHHH
Q 027732 193 SPDRACNLAKQVR 205 (219)
Q Consensus 193 ~~~~A~~lAk~Af 205 (219)
|+++|.++=+.|.
T Consensus 75 D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 75 EPDDARDYFQMAR 87 (161)
T ss_dssp CGGGCHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999887766664
No 185
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=30.67 E-value=1.7e+02 Score=27.30 Aligned_cols=64 Identities=19% Similarity=0.003 Sum_probs=41.1
Q ss_pred hhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCC-cchhhhhhHHHHHHHHHh-------------CChHHHHHHHHHH
Q 027732 139 AEFKTGAERKEAAESTLLAYKSAQDIALAELAPTH-PIRLGLALNFSVFYYEIL-------------NSPDRACNLAKQV 204 (219)
Q Consensus 139 aE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~-pirLgL~LN~SVF~yEi~-------------~~~~~A~~lAk~A 204 (219)
+|...++.-.+..++|.++|++|++..++ +..|+ |--.-..||- +-.||.. |.-+.|-.++++|
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aGDyy~~AA~k~~yG~~eqAe~l~~~A 513 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAGDYYVNAARKALNGDLEQAKIDAEKA 513 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhccHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 46666677778999999999999999974 55444 4333333333 3336655 4555666666554
No 186
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=30.09 E-value=94 Score=24.03 Aligned_cols=22 Identities=14% Similarity=-0.073 Sum_probs=15.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHH
Q 027732 143 TGAERKEAAESTLLAYKSAQDI 164 (219)
Q Consensus 143 ~~~~~~~~~~~a~~aY~~A~~~ 164 (219)
++.+|...-+.|..+|+.|+++
T Consensus 10 ~~~~r~~~feeA~~~~~~Ai~l 31 (158)
T 1zu2_A 10 TEFDRILLFEQIRQDAENTYKS 31 (158)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHhHHHHHHHHHHHHHHH
Confidence 4566767777888888887753
No 187
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=29.88 E-value=49 Score=27.80 Aligned_cols=28 Identities=21% Similarity=0.154 Sum_probs=19.6
Q ss_pred hhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 178 GLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 178 gL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
.+.+|.+..|+. +++.++|+...++|+.
T Consensus 231 ~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 231 PCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 356677776665 6788888777777754
No 188
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=29.53 E-value=1e+02 Score=18.99 Aligned_cols=60 Identities=17% Similarity=0.176 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSI 72 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~i 72 (219)
.-+..++.+..+.|+|++++.++++.++.. +. +.+-...+..+|-. .+....+...+...
T Consensus 10 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 69 (91)
T 1na3_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELD--PN-NAEAWYNLGNAYYK-QGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 345678899999999999999999999875 43 34445556666543 45556666666543
No 189
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=29.14 E-value=83 Score=22.06 Aligned_cols=18 Identities=28% Similarity=0.139 Sum_probs=11.6
Q ss_pred CCCCCCcHHHHHHHHHHH
Q 027732 1 MSPTDSSREENVYMAKLA 18 (219)
Q Consensus 1 ~~~m~~~r~~li~~Akla 18 (219)
|.+|+-+++++-..|+||
T Consensus 1 m~~M~i~~e~V~~iA~LA 18 (92)
T 3kfu_G 1 MPGMELSPELLRKLETLA 18 (92)
T ss_dssp ----CCCHHHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHHh
Confidence 677888888888888776
No 190
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=28.94 E-value=1.3e+02 Score=23.17 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHhhhcchhhhhhhcCch--hHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 027732 97 NELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGA--ERKEAAESTLLAYKSAQDIALAELAPTHP 174 (219)
Q Consensus 97 ~EL~~~c~eii~lid~~Lip~~~~~eskvfy~KmkgDyyRYlaE~~~~~--~~~~~~~~a~~aY~~A~~~a~~~L~pt~p 174 (219)
.+|..-...+.+.|...| .+.+||++-|.-+|.+-+---.++...|. ...++.. ..+.|+.--+-+++.|..+-|
T Consensus 60 p~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK~-~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 60 PELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKR-LHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHHH-HHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHH-HHHHHHcCCHHHHHHHHHhCc
Confidence 445555556667777776 56689999999999887666666644332 1222222 236666555555544444444
No 191
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=28.37 E-value=1.4e+02 Score=22.56 Aligned_cols=18 Identities=17% Similarity=0.298 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCC
Q 027732 151 AESTLLAYKSAQDIALAELAP 171 (219)
Q Consensus 151 ~~~a~~aY~~A~~~a~~~L~p 171 (219)
-+.+.++|++|++ ..+||
T Consensus 108 E~~~~~~Y~~al~---~~lp~ 125 (153)
T 4etr_A 108 EDVAKHRYQAALE---KSLPA 125 (153)
T ss_dssp HHHHHHHHHHHHH---SCCCH
T ss_pred HHHHHHHHHHHHh---ccCCH
Confidence 3467889999986 24554
No 192
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=27.97 E-value=74 Score=27.57 Aligned_cols=63 Identities=10% Similarity=0.005 Sum_probs=43.7
Q ss_pred hhcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcch-hhhhhHHHHHHHHHhCChHHHHHHHHHHHH
Q 027732 131 KGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIR-LGLALNFSVFYYEILNSPDRACNLAKQVRV 206 (219)
Q Consensus 131 kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~lAk~Afd 206 (219)
-|-+|-.+=++.-|+ .++|.+.|++|+++. |-. +..-..|+-|+..-.++++.|....++|..
T Consensus 205 LG~lY~~vPp~~gGd-----~ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 205 LTKFYAAAPESFGGG-----MEKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHSCTTTTCC-----HHHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccCCC-----HHHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 344444444444444 457899999999875 543 666677778877767999999888887765
No 193
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=27.63 E-value=80 Score=25.49 Aligned_cols=30 Identities=10% Similarity=0.016 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
+.+..+|....+.|+|++++.++.+.+...
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~ 34 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRN 34 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 456677788888888888888888877665
No 194
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=26.53 E-value=3e+02 Score=25.62 Aligned_cols=73 Identities=21% Similarity=0.378 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCHHH---HHHHH---HHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHHHHHHHHH
Q 027732 22 ERYEEMVEFMEKVAKTVDVEELTVEE---RNLLS---VAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKI 95 (219)
Q Consensus 22 eRy~dm~~~mk~~i~~~~~~~L~~eE---RnLls---vayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~~y~~ki 95 (219)
++|.+-++-+++++... .....+| -.+|- .+|..++..-+..+..|..--+++...-+..-...+.+||.++
T Consensus 121 ~k~g~~l~~v~~~~~~~--~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~ 198 (526)
T 3iyk_A 121 EKFGKELEEVYNFMNGE--ANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKI 198 (526)
T ss_pred HHHHHHHHHHHHHHHHh--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHH
Confidence 55666677777776543 3444444 44554 4566777777888888877667765544555667888888775
Q ss_pred H
Q 027732 96 E 96 (219)
Q Consensus 96 ~ 96 (219)
.
T Consensus 199 ~ 199 (526)
T 3iyk_A 199 D 199 (526)
T ss_pred H
Confidence 4
No 195
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=25.75 E-value=98 Score=27.56 Aligned_cols=18 Identities=0% Similarity=-0.108 Sum_probs=0.0
Q ss_pred hCCHHHHHHHHHHHHhcC
Q 027732 21 AERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 21 aeRy~dm~~~mk~~i~~~ 38 (219)
.|++++++..+++.++.+
T Consensus 2 ~g~~~~A~~~~~~al~~~ 19 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR 19 (568)
T ss_dssp ------------------
T ss_pred CccHHHHHHHHHHHHHhC
Confidence 467888888888887665
No 196
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=25.05 E-value=1.8e+02 Score=20.25 Aligned_cols=29 Identities=7% Similarity=0.067 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
.+..+|....+.|+|++++..+++++..+
T Consensus 20 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~ 48 (142)
T 2xcb_A 20 QLYALGFNQYQAGKWDDAQKIFQALCMLD 48 (142)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHhC
Confidence 34455666666666666666666666554
No 197
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=24.98 E-value=43 Score=23.79 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=28.1
Q ss_pred hCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhh
Q 027732 21 AERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKN 57 (219)
Q Consensus 21 aeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn 57 (219)
++..||++..+..+ ... ..|+.++..-|.|+.|=
T Consensus 24 ~~nhDDi~~Ive~~-~~~--~~~~~~~a~af~vGLKL 57 (88)
T 3cjl_A 24 FSLHDDLFKLLEKV-DGK--MDMTPEQTQAFMVGLKL 57 (88)
T ss_dssp EEESSCHHHHHHHH-TTT--SSSCHHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHh-hcc--CCCCHHHHHHHHHHHHH
Confidence 46789999999887 444 88999999999999874
No 198
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=24.57 E-value=2.2e+02 Score=21.20 Aligned_cols=58 Identities=12% Similarity=0.171 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHH
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIIS 70 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~ 70 (219)
.-+..++.+..+.|+|++++.+..+.++.+ |. +.+-...+..+|.. .+....+...+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~ 100 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKN--YN-LANAYIGKSAAYRD-MKNNQEYIATLT 100 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT--CS-HHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhC--cc-hHHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 455678899999999999999999999876 44 33444555555543 344455555554
No 199
>3dlq_I Interleukin-22; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} SCOP: a.26.1.3 PDB: 1m4r_A 3g9v_B 3q1s_I 1ykb_A* 3dgc_L*
Probab=24.29 E-value=54 Score=25.46 Aligned_cols=16 Identities=13% Similarity=0.069 Sum_probs=12.6
Q ss_pred HHHHHHHHhhhhhhhc
Q 027732 203 QVRVAALLFLSFFLSF 218 (219)
Q Consensus 203 ~Afd~Ai~~ld~~~~~ 218 (219)
+|.-.||.|||.|+++
T Consensus 130 ~g~~KAiGELDILl~w 145 (151)
T 3dlq_I 130 SGEIKAIGELDLLFMS 145 (151)
T ss_dssp HHHHHHHHTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4455899999999863
No 200
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=24.06 E-value=25 Score=25.27 Aligned_cols=53 Identities=13% Similarity=0.275 Sum_probs=32.6
Q ss_pred hcchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhh----hhhHHHHHHH
Q 027732 132 GDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLG----LALNFSVFYY 188 (219)
Q Consensus 132 gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg----L~LN~SVF~y 188 (219)
|+.--||-.+...-+ .-+....+..+.|++-- +..|.||..|+ +.-+|++|+-
T Consensus 12 ~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 12 YEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp SSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344446655543321 22445566677777543 36899999998 6667887753
No 201
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=24.01 E-value=1.2e+02 Score=25.87 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHHHHHHHHhCChHHHHHHHHHHHHH
Q 027732 152 ESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRVA 207 (219)
Q Consensus 152 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~lAk~Afd~ 207 (219)
+.|.+.|++|++ +.|.+| ....+.+..|+. +++.++|+...++|+.-
T Consensus 290 ~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~~-~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 290 QGAVDSCLEALE-----IDPSNT---KALYRRAQGWQG-LKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCchhH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 457777777774 345443 344555665554 79999999888887653
No 202
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=23.65 E-value=2.4e+02 Score=21.32 Aligned_cols=47 Identities=0% Similarity=-0.138 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCC--HHHHHHHHHHHhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELT--VEERNLLSVAYKN 57 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~--~eERnLlsvayKn 57 (219)
+-+..+|.+..+.|+|++++..++++++.. |.-. .+-.-.+..+|-.
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~--P~~~~~~~a~~~~g~~~~~ 90 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLN--PTHPNIDYVMYMRGLTNMA 90 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHC--cCCCcHHHHHHHHHHHHHh
Confidence 456788999999999999999999999887 4432 2334455555543
No 203
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=22.66 E-value=1.1e+02 Score=20.99 Aligned_cols=27 Identities=15% Similarity=0.327 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 027732 10 ENVYMAKLAEQAERYEEMVEFMEKVAK 36 (219)
Q Consensus 10 ~li~~AklaeqaeRy~dm~~~mk~~i~ 36 (219)
+++..|=-.+++|+|++++.+.++-++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 456666666888999999988877664
No 204
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=22.22 E-value=2.1e+02 Score=20.08 Aligned_cols=78 Identities=8% Similarity=0.127 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhhhhhh--h-cCCchhHHHHHHHHHHHHHHHH
Q 027732 24 YEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE--S-RGNEDHVSVIKEYRSKIENELS 100 (219)
Q Consensus 24 y~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ieq~~~--~-~~~~~~~~~i~~y~~ki~~EL~ 100 (219)
|.....-+...+..- +.++-++|+-.......-+..-..=++... +|-+.- + ..-......++.||..+..||.
T Consensus 10 f~~~~~~i~~~l~~~--~~~~ge~Rk~~i~~ie~~ldEA~ell~qMe-lE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk 86 (97)
T 3onj_A 10 FKTTLEQAKASLAEA--PSQPLSQRNTTLKHVEQQQDELFDLLDQMD-VEVNNSIGDASERATYKAKLREWKKTIQSDIK 86 (97)
T ss_dssp HHHHHHHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHH--hccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555444 678889999887777777766544333332 222211 0 0012345678888888777665
Q ss_pred HHHH
Q 027732 101 KICD 104 (219)
Q Consensus 101 ~~c~ 104 (219)
.--+
T Consensus 87 ~~lk 90 (97)
T 3onj_A 87 RPLQ 90 (97)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5333
No 205
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=22.13 E-value=2.5e+02 Score=21.00 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=29.5
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q 027732 14 MAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAY 55 (219)
Q Consensus 14 ~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvay 55 (219)
++.+..+.|+|++++.++++.++.+ |. +.+-...+..+|
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~--p~-~~~~~~~lg~~~ 98 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKA--PN-NVDCLEACAEMQ 98 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHC--CC-CHHHHHHHHHHH
Confidence 7889999999999999999999887 44 334444444444
No 206
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=21.92 E-value=2.3e+02 Score=20.43 Aligned_cols=62 Identities=8% Similarity=-0.040 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHHHhhh
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIE 73 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l~~ie 73 (219)
.-+..++.+..+.|+|++++.++.+.++.. +. +.+-...+..+|-...+....+...+....
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~ 104 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALSIK--PD-SAEINNNYGWFLCGRLNRPAESMAYFDKAL 104 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhC--CC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 456678889999999999999999999875 43 344555566666443255566666665433
No 207
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=21.29 E-value=79 Score=22.16 Aligned_cols=29 Identities=10% Similarity=0.072 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 027732 8 REENVYMAKLAEQAERYEEMVEFMEKVAK 36 (219)
Q Consensus 8 r~~li~~AklaeqaeRy~dm~~~mk~~i~ 36 (219)
--+++..|--.+.+|+|++++.+.+..++
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 35667777777899999999998887764
No 208
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=21.20 E-value=2.1e+02 Score=22.91 Aligned_cols=30 Identities=20% Similarity=0.068 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q 027732 9 EENVYMAKLAEQAERYEEMVEFMEKVAKTV 38 (219)
Q Consensus 9 ~~li~~AklaeqaeRy~dm~~~mk~~i~~~ 38 (219)
+-...+|.+..+.||+++++..+.+++..+
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~ 249 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXD 249 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcc
Confidence 455677888888888888888888888776
No 209
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=21.13 E-value=2.2e+02 Score=20.54 Aligned_cols=58 Identities=3% Similarity=-0.004 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhhhhhhhhHHHHH
Q 027732 8 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRII 69 (219)
Q Consensus 8 r~~li~~AklaeqaeRy~dm~~~mk~~i~~~~~~~L~~eERnLlsvayKn~i~~~R~s~R~l 69 (219)
-+.++.+|....+.|+|++++..++++++.+ |. +.+=...+..+|-. .+....+...+
T Consensus 6 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~--P~-~~~a~~~la~~~~~-~g~~~~A~~~~ 63 (176)
T 2r5s_A 6 DEQLLKQVSELLQQGEHAQALNVIQTLSDEL--QS-RGDVKLAKADCLLE-TKQFELAQELL 63 (176)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHH--HT-SHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC--CC-cHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 3567889999999999999999999988775 33 24445555555532 34444444444
No 210
>1tdp_A Carnobacteriocin B2 immunity protein; four-helix bundle, antimicrobial protein; NMR {Carnobacterium maltaromaticum} SCOP: a.29.8.1
Probab=20.44 E-value=2.6e+02 Score=20.60 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=36.1
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHHhhhhhhhhcCCchhHHHHHHHHHHHHH-H----HHHHHHHHHHHHhhcccCCCC-Cc
Q 027732 48 RNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRSKIEN-E----LSKICDGILSLLESHLIPSAS-SA 121 (219)
Q Consensus 48 RnLlsvayKn~i~~~R~s~R~l~~ieq~~~~~~~~~~~~~i~~y~~ki~~-E----L~~~c~eii~lid~~Lip~~~-~~ 121 (219)
-+++|+||+. ++-+.++...+.|-.+-+++.+ + ...+|...-..|-++++-+.. -|
T Consensus 9 ~~~lS~AY~D------------------peVk~~p~Lr~~lf~~Ak~L~~~~d~~~y~~V~~KLs~~IS~Y~l~hh~~~P 70 (111)
T 1tdp_A 9 YLNLSEAYKD------------------PEVKANEFLSKLVVQCAGKLTASNSENSYIEVISLLSRGISSYYLSHKRIIP 70 (111)
T ss_dssp HHHHHHHHTC------------------HHHHSCHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCTTSCCCCC
T ss_pred HHHHHHHhCC------------------HhhhcCHHHHHHHHHHHHHhccCCCcchhHhHHHHHHhHHHHHHHHhcccCc
Confidence 3577888876 1223345555566666665544 2 556666666666666654433 23
Q ss_pred h-hHHHHHHhhh
Q 027732 122 E-SKVFYLKMKG 132 (219)
Q Consensus 122 e-skvfy~Kmkg 132 (219)
+ .-..|...+.
T Consensus 71 ~ali~L~~~I~k 82 (111)
T 1tdp_A 71 SSMLTIYTQIQK 82 (111)
T ss_dssp GGGTHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 3 2234444444
Done!