BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027733
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80513|CCU41_ARATH Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1
Length = 202
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/193 (67%), Positives = 153/193 (79%), Gaps = 7/193 (3%)
Query: 23 EEAAVMPKLITVLSSLLQRVAESNDLSQRF--HPQKISVFHGLTRPTISIHSYLERIFKY 80
E +VM KLI LSSLL+RVAESNDL++R Q++SVFHGL+RPTI+I SYLERIFKY
Sbjct: 5 ENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKY 64
Query: 81 ANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKV 140
ANCSPSCFVVAYVYLDRF +QPSLPINSFNVHRLLITSV+V+AKF+DD+YYNNA+YAKV
Sbjct: 65 ANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKV 124
Query: 141 GGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREMFLQSPLQLEEPLNVGRQLK 200
GGIST EMN LE+DFLF LGF+LNVTP F Y SYLQ+EM L PL L V
Sbjct: 125 GGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPLSL-----VVVPSS 179
Query: 201 QYHCCFSEDDCAH 213
+ F++D+ +H
Sbjct: 180 RSLITFNDDEASH 192
>sp|Q9LY16|CCU42_ARATH Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1
Length = 216
Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 143/174 (82%), Gaps = 7/174 (4%)
Query: 21 HQEE--AAVMPKLITVLSSLLQRVAESND-LSQRFHPQK-ISVFHGLTRPTISIHSYLER 76
H +E A +MP +IT +SSLLQRV+E+ND LS+ F K IS F+ +T+P+ISI SY+ER
Sbjct: 11 HDQEPMAEIMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMER 70
Query: 77 IFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAF 136
IFKYA+CS SC++VAY+YLDRF QKQP LPI+S NVHRL+ITSVLVSAKFMDD+ YNNAF
Sbjct: 71 IFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAF 130
Query: 137 YAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREMFLQ---SPL 187
YAKVGGI+T EMNLLE+DFLF +GFQLNVT + + YCS LQREM ++ SPL
Sbjct: 131 YAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPL 184
>sp|Q9FKF6|CCU43_ARATH Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1
Length = 219
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/158 (68%), Positives = 133/158 (84%), Gaps = 4/158 (2%)
Query: 25 AAVMPKLITVLSSLLQRVAESND-LSQRFHPQKISVFHGLTRPTISIHSYLERIFKYANC 83
A +MP ++T +S LLQRV+E+ND LSQ+ QK S F G+T+P+ISI SYLERIF+YANC
Sbjct: 19 AEIMPSVLTAMSYLLQRVSETNDNLSQK---QKPSSFTGVTKPSISIRSYLERIFEYANC 75
Query: 84 SPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGGI 143
S SC++VAY+YLDRF +KQP LPINSFNVHRL+ITSVLVSAKFMDD+ YNN +YAKVGGI
Sbjct: 76 SYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAKVGGI 135
Query: 144 STTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREM 181
S EMN+LE+DFLF +GF+LNVT + F YC +LQREM
Sbjct: 136 SREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREM 173
>sp|Q7XC35|CCP41_ORYSJ Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1
Length = 212
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 142/200 (71%), Gaps = 15/200 (7%)
Query: 23 EEAAVMPKLITVLSSLLQRVAESNDLSQRFHPQKI-----SVFHGLTRPTISIHSYLERI 77
E A +P+++ +LSSLLQRVAE ND + S F GLT+P ISI YLERI
Sbjct: 5 EVAEAVPRVVAILSSLLQRVAERNDAAAAAAAVGEEAAAVSAFQGLTKPAISIGGYLERI 64
Query: 78 FKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFY 137
F++ANCSPSC+VVAY+YLDRF +++P+L ++SFNVHRLLITSVL + KF+DDI YNNA++
Sbjct: 65 FRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDDICYNNAYF 124
Query: 138 AKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREMFLQSPLQLEEPLNVGR 197
A+VGGIS EMN LEVDFLF + F LNVTPAAF +YC+ LQ EM LE+P V
Sbjct: 125 ARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQSEM-----TYLEQPPAV-- 177
Query: 198 QLKQYHCCFSEDD---CAHQ 214
L + HCC S+ D C H+
Sbjct: 178 DLPRLHCCPSDQDDAGCHHK 197
>sp|Q75HV0|CCP31_ORYSJ Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1
Length = 236
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 129/205 (62%), Gaps = 8/205 (3%)
Query: 2 ADHHHHHHLQLGTNIILEGHQEEAAVMPKLITVLSSLLQRVAESND--LSQRFHPQKISV 59
+D H +L LG + + ++ PK++ +L++ L R + N+ L ++
Sbjct: 11 SDKHEESYLSLG--LTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTI 68
Query: 60 FHGLTRPTISIHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITS 119
FHG P +SI Y ERIFKY+ CSPSCFV+A +Y++R+ Q QP + + S +VHRLLITS
Sbjct: 69 FHGHRAPDLSIKLYAERIFKYSECSPSCFVLALIYMERYLQ-QPHVYMTSLSVHRLLITS 127
Query: 120 VLVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQR 179
V+V+AKF DD ++NNAFYA+VGGIST EMN LE+D LF+L F+L V F +YC L++
Sbjct: 128 VVVAAKFTDDAFFNNAFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEK 187
Query: 180 E---MFLQSPLQLEEPLNVGRQLKQ 201
E + + P+Q +N + L +
Sbjct: 188 ETMVLVIDRPIQQVHGVNSTKDLSR 212
>sp|Q9SHD3|CCU21_ARATH Cyclin-U2-1 OS=Arabidopsis thaliana GN=CYCU2-1 PE=1 SV=1
Length = 222
Score = 160 bits (404), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Query: 11 QLGTNIILEGHQEEAAVMPKLITVLSSLLQRVAESNDLSQRFHPQ--KISVFHGLTRPTI 68
+L +++ +Q+++ +P +I+VLSSL++R N+ R + K VF P +
Sbjct: 10 KLRSDLYSYSYQDDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRVFDCREIPDM 69
Query: 69 SIHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMD 128
+I SYLERIF+Y PS +VVAYVY+DRF Q I+ NVHRLLIT++++++K+++
Sbjct: 70 TIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASKYVE 129
Query: 129 DIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREMFLQSPLQ 188
D+ Y N+++AKVGG+ T ++N LE++FLF +GF+L+V + F +YC +L+RE+ + Q
Sbjct: 130 DMNYKNSYFAKVGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGGGYQ 189
Query: 189 LEEPLNVGRQLK 200
+E+ L ++K
Sbjct: 190 IEKALRCAEEIK 201
>sp|Q9M205|CCU22_ARATH Cyclin-U2-2 OS=Arabidopsis thaliana GN=CYCU2-2 PE=1 SV=1
Length = 230
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 118/178 (66%), Gaps = 6/178 (3%)
Query: 29 PKLITVLSSLLQRVAESND-LSQRFHPQ-----KISVFHGLTRPTISIHSYLERIFKYAN 82
P +I+VLSSL+ R N+ +S+R P K +F P ++I SYL RIF+Y
Sbjct: 30 PLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQIFDCREIPDMTIQSYLGRIFRYTK 89
Query: 83 CSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGG 142
PS +VVAYVY+DRF Q P I+ NVHRLLIT++++++K+++D+ Y N+++AKVGG
Sbjct: 90 AGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLITTIMIASKYVEDLNYRNSYFAKVGG 149
Query: 143 ISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREMFLQSPLQLEEPLNVGRQLK 200
+ T ++N LE++FLF +GF+L+V + F +YC +L+RE+ Q+E+ L ++K
Sbjct: 150 LETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHLEREVSFGGGYQIEKALRCAEEIK 207
>sp|Q9LJ45|CCU11_ARATH Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1
Length = 210
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 26 AVMPKLITVLSSLLQRVAESNDL---SQRFHPQKISVFHGLTRPTISIHSYLERIFKYAN 82
A P+++T++S +++++ N+ + + + FHG+ P+ISI YLERI+KY
Sbjct: 22 AATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTK 81
Query: 83 CSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGG 142
CSP+CFVV YVY+DR A K P + S NVHRLL+T V+++AK +DD++YNN FYA+VGG
Sbjct: 82 CSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGG 141
Query: 143 ISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREMFLQ 184
+S ++N +E++ LF L F++ V+ F +YC +L++EM L
Sbjct: 142 VSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLN 183
>sp|Q8LB60|CCU31_ARATH Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2
Length = 221
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 101/141 (71%), Gaps = 3/141 (2%)
Query: 54 PQKISVFHGLTRPTISIHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVH 113
P ++VF G + P ISI YL+RIFKY+ CSPSCFV+A++Y+D F K +L + NVH
Sbjct: 59 PDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRAL-LKPLNVH 117
Query: 114 RLLITSVLVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTY 173
RL+IT+V+++AK DD Y+NNA+YA+VGG++T E+N LE++ LF L F+L V P F+T+
Sbjct: 118 RLIITTVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTH 177
Query: 174 CSYLQREMFLQSPLQLEEPLN 194
C L+++ + Q+E P+
Sbjct: 178 CCQLEKQN--RDGFQIEWPIK 196
>sp|Q7FAT5|CCP21_ORYSJ Cyclin-P2-1 OS=Oryza sativa subsp. japonica GN=CYCP2-1 PE=2 SV=1
Length = 217
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 12/185 (6%)
Query: 29 PKLITVLSSLLQRVAESNDLSQRFHPQKISV-----FHGLTRPTISIHSYLERIFKYANC 83
P +++VL+SLL+R N+ Q + F T +S+H++LER +YAN
Sbjct: 26 PVVVSVLASLLERHIARNERDQAAAADGEAARRARAFDSGTVLDMSLHAFLERFSRYANV 85
Query: 84 SPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGGI 143
SP +VVAY YLDR ++ + + S N RLL T++LV++KF++D Y N+++A VGG+
Sbjct: 86 SPQVYVVAYAYLDRL-RRGDGVRVVSANAQRLLTTAILVASKFVEDRNYKNSYFAAVGGL 144
Query: 144 STTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREMFLQSPLQLEEPLNVGRQLKQYH 203
+ E++ LE+DFLF + F+LNV+ + F +YC +L+RE+ Q+E R LK+
Sbjct: 145 TAAELSSLELDFLFLMQFRLNVSVSVFQSYCRHLEREVSYGGGYQVE------RCLKKAL 198
Query: 204 CCFSE 208
C E
Sbjct: 199 VCSGE 203
>sp|Q0J9W0|CCP11_ORYSJ Cyclin-P1-1 OS=Oryza sativa subsp. japonica GN=CYCP1-1 PE=3 SV=2
Length = 264
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 80/120 (66%)
Query: 61 HGLTRPTISIHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSV 120
G P I + YLER+ +YA P C+VVAY Y+D A ++P+ + S NVHRLL+ +
Sbjct: 67 RGAPAPRIGVAQYLERVHRYAGLEPECYVVAYAYVDMAAHRRPAAAVASRNVHRLLLACL 126
Query: 121 LVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQRE 180
LV++K +DD ++NNAF+A+VGG+S EMN LE++ L L F++ ++ + Y +L++E
Sbjct: 127 LVASKVLDDFHHNNAFFARVGGVSNAEMNRLELELLAVLDFEVMLSHRVYELYREHLEKE 186
>sp|P40186|PCL7_YEAST PHO85 cyclin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL7 PE=1 SV=3
Length = 285
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 22/172 (12%)
Query: 30 KLITVLSSLLQRVA----ESNDLSQRFHPQK-------ISVFHGLTRPTISIHSYLERIF 78
+LI ++S+LL R+ E+ D+SQ+ + I F+G P I++ YLERI
Sbjct: 109 ELILMISALLNRIITANDETTDVSQQVSDETEDELLTPILAFYGKNVPEIAVVQYLERIQ 168
Query: 79 KYANCSPSCFVVAYVYLDRFAQK-----------QPSLPINSFNVHRLLITSVLVSAKFM 127
KY + F+ VY DR ++ + ++S N+HRLLIT V + KF+
Sbjct: 169 KYCPTTNDIFLSLLVYFDRISKNYGHSSERNGCAKQLFVMDSGNIHRLLITGVTICTKFL 228
Query: 128 DDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQR 179
D +Y+N+ YAKVGGIS E+N LE+ FL F+L V+ Y + L +
Sbjct: 229 SDFFYSNSRYAKVGGISLQELNHLELQFLILCDFKLLVSVEEMQKYANLLYK 280
>sp|Q06712|PREG_NEUCR Nuc-1 negative regulatory protein preg OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=preg PE=1 SV=1
Length = 483
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
Query: 31 LITVLSSLLQRVAESNDLSQRFHPQK--ISVFHGLTRPTISIHSYLERIFKYANCSPSCF 88
L+ +++ +L + E ND + + Q+ ++ FH T P IS+ YL R+ K+A SP
Sbjct: 275 LVVLIAHMLGELIELNDEAAQKVGQRHNLTRFHSRTTPGISVLDYLHRLAKHAYLSPPIL 334
Query: 89 VVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGGISTTEM 148
+ Y+DR IN+ VHR LIT+ V+AK + D + N YA+VGG+ E+
Sbjct: 335 LSMVYYIDRLCALYSDFTINTLTVHRFLITAATVAAKGLSDSFLTNTLYARVGGVRVAEL 394
Query: 149 NLLEVDFLFDLGFQLNVTPAAFYTY 173
N+LE++FL + +++ P Y
Sbjct: 395 NMLELEFLHRVDWKIVPDPDVLVAY 419
>sp|O42979|YGZA_SCHPO PHO85 cyclin-like protein C20F10.10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC20F10.10 PE=3 SV=1
Length = 243
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 30 KLITVLSSLLQRVAESNDLSQR--------FHPQKIS----VFHGLTRPTISIHSYLERI 77
KL+ ++S L R+ ND Q P + +F P+ISI +YL RI
Sbjct: 30 KLLEMISVFLSRLTRLNDSKQEATESDQIPLSPTSLKNPCLIFSAKNVPSISIQAYLTRI 89
Query: 78 FKYANCSPSCFVVAYVYLDRFAQK-QPSLPINSFNVHRLLITSVLVSAKFMDDIYYNNAF 136
KY + F+ +YLDR ++ INSFN+HR LI ++KF D++Y N+
Sbjct: 90 LKYCPATNDVFLSVLIYLDRIVHHFHFTVFINSFNIHRFLIAGFTAASKFFSDVFYTNSR 149
Query: 137 YAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYL 177
YAKVGGI E+N LE+ F F L ++ Y L
Sbjct: 150 YAKVGGIPLHELNHLELSFFVFNDFNLFISLEDLQAYGDLL 190
>sp|P20052|PHO80_YEAST PHO85 cyclin PHO80 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=PHO80 PE=1 SV=3
Length = 293
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 57 ISVFHGLTRPTISIHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLL 116
++ +H P ISI +Y R+ K+++ + + Y+D P +NS HR L
Sbjct: 64 LTRYHSKIPPNISIFNYFIRLTKFSSLEHCVLMTSLYYIDLLQTVYPDFTLNSLTAHRFL 123
Query: 117 ITSVLVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSY 176
+T+ V+ K + D + NA YAKVGG+ E+N+LE DFL + +++ + T CS
Sbjct: 124 LTATTVATKGLCDSFSTNAHYAKVGGVRCHELNILENDFLKRVNYRI-IPRDHNITLCSI 182
Query: 177 LQRE 180
Q++
Sbjct: 183 EQKQ 186
>sp|P40038|PCL6_YEAST PHO85 cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL6 PE=1 SV=1
Length = 420
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 107 INSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVT 166
++S N+HRL+I + VS KF+ D +Y+N+ Y++VGGIS E+N LE+ FL F+L ++
Sbjct: 332 MDSHNIHRLIIAGITVSTKFLSDFFYSNSRYSRVGGISLQELNHLELQFLVLCDFELLIS 391
Query: 167 PAAFYTYCSYLQR 179
Y L R
Sbjct: 392 VNELQRYADLLYR 404
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 34/128 (26%)
Query: 8 HHLQLGT--NIILEGHQEEAAVMP----------KLITVLSSLLQRVAESNDLSQRFHP- 54
H +Q T + IL+G + V P KL+ +L++LL ++ +SND + +P
Sbjct: 137 HTVQSSTQEDKILDGDTSNSQVTPSLNIAEFPTDKLLKMLTALLTKIIKSNDRTAATNPS 196
Query: 55 --QKIS-------------------VFHGLTRPTISIHSYLERIFKYANCSPSCFVVAYV 93
Q+I F G P I + Y +RI KY + F+ V
Sbjct: 197 LTQEIENGRCLALSDNEKKYLSPVLGFRGKHVPQIGLDQYFQRIQKYCPTTNDVFLSLLV 256
Query: 94 YLDRFAQK 101
Y DR +++
Sbjct: 257 YFDRISKR 264
>sp|P53124|PCL10_YEAST PHO85 cyclin-10 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL10 PE=1 SV=1
Length = 433
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 51 RFHPQKISVFHGLTRPTISIHSYLERIFKYANCSPSCFVVAY-----VYLDRFAQK--QP 103
R ++ S F+ ++PT+S +L+RI P+ ++VA ++L R Q
Sbjct: 291 RVEKKEYSNFYMKSKPTLSSADFLKRIQDKCEYQPTVYLVATFLIDTLFLTRDGNNILQL 350
Query: 104 SLPINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLF 157
L + VHR++I +V +S K ++D +++ +++KV GIS + LEV L
Sbjct: 351 KLNLQEKEVHRMIIAAVRLSTKLLEDFVHSHEYFSKVCGISKRLLTKLEVSLLI 404
>sp|Q6NRF4|CCY1B_XENLA Cyclin-Y-like protein 1-B OS=Xenopus laevis GN=ccnyl1-b PE=2 SV=1
Length = 343
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 60 FHGLTRPTIS------------IHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPI 107
H LTR ++ I+ ++ +F A + C +V VYL+R + I
Sbjct: 151 LHPLTREEVTDDYCKHDPDHKHIYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDI 209
Query: 108 NSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKV-GGISTTEMNLLEVDFLFDLGFQLNVT 166
N R+++ ++L+++K DD N Y ++ I+ +MN +E FL L F +NV
Sbjct: 210 CPSNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINV- 268
Query: 167 PAAFYTYCSYLQREMFLQSPLQ-LEEPLNVGRQLK 200
PA+ Y + R + + L L EPL+ R K
Sbjct: 269 PASVYAKYYFDLRSLADDNNLSFLLEPLSKERAQK 303
>sp|Q28EL0|CCYL1_XENTR Cyclin-Y-like protein 1 OS=Xenopus tropicalis GN=ccnyl1 PE=2 SV=1
Length = 343
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 60 FHGLTRPTIS------------IHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPI 107
H LTR ++ I+ ++ +F A + C +V VYL+R + I
Sbjct: 151 LHPLTREEVADDYCKHDPDHKHIYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDI 209
Query: 108 NSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKV-GGISTTEMNLLEVDFLFDLGFQLNVT 166
N R+++ ++L+++K DD N Y ++ I+ +MN +E FL L F +NV
Sbjct: 210 CPSNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINV- 268
Query: 167 PAAFYTYCSYLQREMFLQSPLQ-LEEPLNVGRQLK 200
PA+ Y + R + + L L EPL+ R K
Sbjct: 269 PASVYAKYYFDLRSLADDNNLSFLLEPLSKERAQK 303
>sp|Q8N7R7|CCYL1_HUMAN Cyclin-Y-like protein 1 OS=Homo sapiens GN=CCNYL1 PE=1 SV=2
Length = 359
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 70 IHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDD 129
I+ ++ +F A + C +V VYL+R + I N R+++ ++L+++K DD
Sbjct: 191 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDICPTNWKRIVLGAILLASKVWDD 249
Query: 130 IYYNNAFYAKV-GGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREM------- 181
N Y ++ I+ +MN +E FL L F +NV PA+ Y + R +
Sbjct: 250 QAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINV-PASVYAKYYFDLRSLADDNNLN 308
Query: 182 FLQSPLQLEEPLNV 195
FL +PL E N+
Sbjct: 309 FLFAPLSKERAQNL 322
>sp|Q5U5D0|CCY1A_XENLA Cyclin-Y-like protein 1-A OS=Xenopus laevis GN=ccnyl1-a PE=2 SV=1
Length = 339
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 70 IHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDD 129
I+ ++ +F A + C +V VYL+R + I N ++++ ++L+S+K DD
Sbjct: 169 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDICPSNWKQIVLGAILLSSKVWDD 227
Query: 130 IYYNNAFYAKV-GGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTY 173
N Y ++ I+ +MN +E FL L F +NVT + + Y
Sbjct: 228 QAVWNVDYCQIMKDITVEDMNEMERHFLELLQFNINVTASVYAKY 272
>sp|Q08CI4|CCYL1_DANRE Cyclin-Y-like protein 1 OS=Danio rerio GN=ccnyl1 PE=2 SV=1
Length = 339
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 70 IHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDD 129
I+ ++ +F A + C +V VYL+R L I N R+++ ++L+++K DD
Sbjct: 169 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAELDICPSNWKRIVLGAILLASKVWDD 227
Query: 130 IYYNNAFYAKV-GGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYLQREMFLQSPLQ 188
N Y ++ I+ +MN +E FL L F +NV PA+ Y + R + + L
Sbjct: 228 QAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINV-PASVYAKYYFDLRSLADDNNLS 286
Query: 189 LE-EPLNVGRQLK 200
EPL+ R K
Sbjct: 287 FPLEPLSNERAQK 299
>sp|Q8BGU5|CCNY_MOUSE Cyclin-Y OS=Mus musculus GN=Ccny PE=1 SV=1
Length = 341
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 70 IHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDD 129
I+ ++ +F A + C +V VYL+R + I N R+++ ++L+++K DD
Sbjct: 171 IYRFVRTLFSAAQLTAECAIVTLVYLERLLTYA-EIDICPANWKRIVLGAILLASKVWDD 229
Query: 130 IYYNNAFYAKV-GGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTY 173
N Y ++ I+ +MN LE FL L F +NV + + Y
Sbjct: 230 QAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKY 274
>sp|Q8ND76|CCNY_HUMAN Cyclin-Y OS=Homo sapiens GN=CCNY PE=1 SV=2
Length = 341
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 70 IHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLLITSVLVSAKFMDD 129
I+ ++ +F A + C +V VYL+R + I N R+++ ++L+++K DD
Sbjct: 171 IYRFVRTLFSAAQLTAECAIVTLVYLERLLT-YAEIDICPANWKRIVLGAILLASKVWDD 229
Query: 130 IYYNNAFYAKV-GGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTY 173
N Y ++ I+ +MN LE FL L F +NV + + Y
Sbjct: 230 QAVWNVDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKY 274
>sp|O14336|MUG80_SCHPO Meiotically up-regulated gene 80 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug80 PE=1 SV=1
Length = 461
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 110 FNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVTP 167
F + LL T+++++ KF+DD + N +++V G T +N E D+L + + L+ P
Sbjct: 331 FQICALLTTALILANKFLDDNTFTNQSWSQVTGFRTALLNSFEQDWLASMSWNLSPGP 388
>sp|P38794|PCL5_YEAST PHO85 cyclin-5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL5 PE=1 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
Query: 63 LTRPTISIHSYLERIFKYANCSPSCFVVAYVYL-----DRFAQKQPSLPINSFNVHRLLI 117
+ T +I +L + K + CS V+A Y R + + SLP S R+ +
Sbjct: 73 INNSTHNILKFLNEVLKRSKCSKENAVLATFYFQKIHQSRGVRDESSLPEFSHCSRRIFL 132
Query: 118 TSVLVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQLNVTPAAFYTYCSYL 177
+++S KF++D Y+ + + G+ +++L+E L L ++L + F +
Sbjct: 133 CCLILSHKFLNDNTYSMKNWQIISGLHAKDLSLMERWCLGKLNYELAIPYDEFLLW---- 188
Query: 178 QREMFLQSPLQLEEPLNV 195
+ +++ L++ P N
Sbjct: 189 ETNTLMKAKLRVGTPANA 206
>sp|Q08966|PCL8_YEAST PHO85 cyclin-8 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL8 PE=1 SV=1
Length = 492
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 54 PQKISVFHGLTRPTISIHSYLERI-----FKYANCSPSCFVVAYVYLDRFAQKQP---SL 105
PQK F P++S +++RI F + +++ V+L R P
Sbjct: 350 PQKFVNFVMKNPPSLSFRDFIDRIQNKCMFGAVVYLGATYLLQLVFLTRDEMDGPIKLKA 409
Query: 106 PINSFNVHRLLITSVLVSAKFMDDIYYNNAFYAKVGGISTTEMNLLEVDFLFDLGFQ 162
+ HR++I+++ ++ K ++D ++ + KV GIS + LE+ F+ + F
Sbjct: 410 KLQEDQAHRIIISTIRIATKLLEDFVHSQNYICKVFGISKRLLTKLEISFMASVNFD 466
>sp|P24867|PCL1_YEAST PHO85 cyclin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL1 PE=1 SV=1
Length = 279
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 69 SIHSYLERIFKYANCSPSCFVVAYVYLDRFAQKQP----SLPINSFNVHRLLITSVLVSA 124
S+ +++ R+ +Y N + A YL++ + P LP +HR+ + +++SA
Sbjct: 54 SLMTFITRLVRYTNVYTPTLLTAACYLNKLKRILPRDATGLP---STIHRIFLACLILSA 110
Query: 125 KFMDDIYYNNAFYAK-VGGISTTE-MNLLEVDFLFDLGFQLNV 165
KF +D N +A+ G+ T E +NL+E L L + L V
Sbjct: 111 KFHNDSSPLNKHWARYTDGLFTLEDINLMERQLLQLLNWDLRV 153
>sp|Q9GKN8|PRELP_BOVIN Prolargin OS=Bos taurus GN=PRELP PE=2 SV=1
Length = 381
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 18/146 (12%)
Query: 24 EAAVMPKLITVLSSLLQRVAESNDLSQRFHPQKISVFHGLTRPTISIHSYLERIFK-YAN 82
+ P L +L+Q N L ++ P+ S H L + I + FK + N
Sbjct: 208 DGVFKPDTFQGLKNLMQLNLAHNTL-RKMPPKVPSAIHQLYLDSNRIEAIPSGYFKGFPN 266
Query: 83 CSPSCFVVAYVYLDRFAQKQPSLPINSFNVHRLL--------ITSVLVSAKFMDDIYYNN 134
+A++ L+ LP NSFN+ LL I+SV + ++ +Y NN
Sbjct: 267 -------LAFIRLNYNQLSDRGLPKNSFNISNLLVLHLSHNRISSVPAISSRLEHLYLNN 319
Query: 135 AFYAKVGGISTTEMNLLEV-DFLFDL 159
K+ G N++ DF DL
Sbjct: 320 NSIEKINGTQICPNNIVAFHDFSSDL 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,738,861
Number of Sequences: 539616
Number of extensions: 2828129
Number of successful extensions: 12382
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 12336
Number of HSP's gapped (non-prelim): 50
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)