BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027734
(219 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+GDG I+F EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 370 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 410
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 411 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+GDG I+F EF
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 361
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 362 IMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 402
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 403 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 37/100 (37%)
Query: 53 KAELKRVFATFDKDGD-------------------------------------GFITKTE 75
+AEL+ + D DGD G+I+ E
Sbjct: 337 EAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAE 396
Query: 76 LVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
L + NL +TD E +EM+ + D +GDG + ++EF +
Sbjct: 397 LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 436
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+GDG I+F EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 370 TMMARKMKYTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 410
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 411 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 37/100 (37%)
Query: 53 KAELKRVFATFDKDGD-------------------------------------GFITKTE 75
+AEL+ + D DGD G+I+ E
Sbjct: 345 EAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAE 404
Query: 76 LVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
L + NL +TD E +EM+ + D +GDG + ++EF +
Sbjct: 405 LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+GDG I+F EF
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 370 TMMARKMKYTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 410
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 411 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 37/100 (37%)
Query: 53 KAELKRVFATFDKDGD-------------------------------------GFITKTE 75
+AEL+ + D DGD G+I+ E
Sbjct: 345 EAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAE 404
Query: 76 LVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
L + NL +TD E +EM+ + D +GDG + ++EF +
Sbjct: 405 LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+GDG I+F EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 370
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 371 TMMARKMKYTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 411
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 412 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 37/100 (37%)
Query: 53 KAELKRVFATFDKDGD-------------------------------------GFITKTE 75
+AEL+ + D DGD G+I+ E
Sbjct: 346 EAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAE 405
Query: 76 LVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
L + NL +TD E +EM+ + D +GDG + ++EF +
Sbjct: 406 LRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+GDG I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 70 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 111 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 113 CML 115
+
Sbjct: 142 VQM 144
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 274 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 333
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 334 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 374
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 375 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 411
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 337 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 377
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 378 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 337 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 377
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 378 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 371
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 372 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 412
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 413 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 371 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 411
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 412 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 371 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 411
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 412 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 371 TMMARWMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 411
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 412 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 371 TMMARKMKYTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 411
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 412 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 112 NLG--EKLTDEEVDQMIREADIDGDGQVNYEEFVQMMTA 148
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E ++M+ + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEF 142
Query: 113 CML 115
+
Sbjct: 143 VQM 145
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 68 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 108
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 109 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 113 CML 115
+
Sbjct: 140 VQM 142
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 68 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 108
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 109 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 113 CML 115
+
Sbjct: 140 VQM 142
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 112 NLG--EXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 113 CML 115
+
Sbjct: 143 VQM 145
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 70 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 111 NLG--EXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 113 CML 115
+
Sbjct: 142 VQM 144
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 14 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 73
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 74 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 114
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 115 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 151
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 86 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 145
Query: 113 CML 115
+
Sbjct: 146 VQM 148
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 67 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 107
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 108 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 144
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 79 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 138
Query: 113 CML 115
+
Sbjct: 139 VQM 141
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 70 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 111 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 113 CML 115
+
Sbjct: 142 VQM 144
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 71
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 72 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 112
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 113 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 149
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 84 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 143
Query: 113 CML 115
+
Sbjct: 144 VQM 146
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 112 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 113 CML 115
+
Sbjct: 143 VQM 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 112 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 112 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 113 CML 115
+
Sbjct: 143 VQM 145
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 66 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 106
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 107 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 143
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 78 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 137
Query: 113 CML 115
+
Sbjct: 138 VQM 140
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 76 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 116
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 117 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 153
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 88 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 147
Query: 113 CML 115
+
Sbjct: 148 VQM 150
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 70 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 111 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 113 CML 115
+
Sbjct: 142 VQM 144
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 112 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 113 CML 115
+
Sbjct: 143 VQM 145
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K FA FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
++ M D +E+ GLIS EL V++
Sbjct: 70 SLMARKMKEQDSEEE-------------------LIEAFKVFDRDGNGLISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG E + +MIR+ D+DGDG +N++EF RMM
Sbjct: 111 NLG--EKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K FA FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
++ M D +E+ GLIS EL V++
Sbjct: 70 SLMARKMKEQDSEEE-------------------LIEAFKVFDRDGNGLISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG E + +MIR+ D+DGDG +N++EF RMM
Sbjct: 111 NLG--EKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 70 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGFISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF MM A
Sbjct: 111 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTA 147
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+GFI+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 82 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 113 CML 115
+
Sbjct: 142 VTM 144
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 68 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 108
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG E E +MIR+ D+DGDG VN++EF +MM
Sbjct: 109 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 80 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 139
Query: 113 CML 115
+
Sbjct: 140 VQM 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 69 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 109
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG E E +MIR+ D+DGDG VN++EF +MM
Sbjct: 110 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 81 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 140
Query: 113 CML 115
+
Sbjct: 141 VQM 143
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGFISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF MM +
Sbjct: 112 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+GFI+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 113 CML 115
+
Sbjct: 143 VTM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 70 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGFISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF MM +
Sbjct: 111 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 147
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+GFI+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 82 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
Query: 113 CML 115
+
Sbjct: 142 VTM 144
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 70 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGYISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ ++DGDG VN++EF +MM A
Sbjct: 111 NLG--EKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 147
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + + +GDG + ++EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEF 141
Query: 113 CML 115
+
Sbjct: 142 VQM 144
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 -MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
++ M D +EK G IS EL V++
Sbjct: 70 NLMARKMKDTDSEEK-------------------LKEAFRVFDKDGNGFISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ DVDGDG VN++EF ++M A
Sbjct: 111 NLG--EKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMA 147
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGFISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG E E +MIR+ D+DGDG VN++EF MM
Sbjct: 112 NLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 146
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+GFI+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 113 CML 115
+
Sbjct: 143 VTM 145
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 23/159 (14%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E G IS EL V++
Sbjct: 66 TMMARKMKDTDSEE--------------------IREAFRVFDKDGNGYISAAELRHVMT 105
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ ++DGDG VN++EF +MM A
Sbjct: 106 NLG--EKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 142
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS EL V++
Sbjct: 71 TMMARKMKDTDSEEE-------------------IREAFRVFDKDGNGFISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF MM +
Sbjct: 112 NLG--EKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+GFI+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEF 142
Query: 113 CML 115
+
Sbjct: 143 VTM 145
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
+E K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 114 -MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
++ M D +E+ G IS EL V++
Sbjct: 71 NLMARKMKDTDSEEE-------------------LKEAFRVFDKDQNGFISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ DVDGDG +N+DEF ++M A
Sbjct: 112 NLG--EKLTDEEVDEMIREADVDGDGQINYDEFVKVMMA 148
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ ELK F FDKD +GFI+ EL + NL +TD E +EM+ + D +GDG I +DEF
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEF 142
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
+ M +E G IS EL V++
Sbjct: 70 TMMARKMKDSEEE--------------------IREAFRVFDKDGNGFISAAELRHVMTN 109
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ D+DGDG VN++EF MM +
Sbjct: 110 LG--EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 114 -MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
++ M D +E+ G IS EL V++
Sbjct: 67 NLMARKMKDTDSEEE-------------------LKEAFRVFDKDGNGFISAAELRHVMT 107
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ DVDGDG VN++EF ++M A
Sbjct: 108 NLG--EKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMA 144
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ ELK F FDKDG+GFI+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 79 EEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 138
Query: 113 CML 115
+
Sbjct: 139 VQV 141
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 -MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
++ M D +E+ G IS EL V++
Sbjct: 70 NLMARKMKDTDSEEE-------------------LKEAFRVFDKDGNGFISAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ DVDGDG VN++EF ++M A
Sbjct: 111 NLG--EKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ ELK F FDKDG+GFI+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 82 EEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 141
Query: 113 CML 115
+
Sbjct: 142 VQV 144
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 22/162 (13%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
S + + K F FDKDGDG IT EL +R+L T+ E ++M+++VDA+G+G IE
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 109 FDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEEL 167
FDEF ++ + + D +E+ G IS EL
Sbjct: 65 FDEFLSLMAKKVKDTDAEEE-------------------LKEAFKVFDKDQNGYISASEL 105
Query: 168 GLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
V+ LG E E ++MI++ D+DGDG VN++EF +MM
Sbjct: 106 RHVMINLG--EKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
+E K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 114 -MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
++ M D +E+ G IS EL V++
Sbjct: 71 NLMARKMKDTDSEEE-------------------LKEAFRVFDKDQNGFISAAELRHVMT 111
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ DVDGDG +N++EF ++M A
Sbjct: 112 NLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT +L +R+L T+ E ++M+ +V A+G+G I+F +F
Sbjct: 311 AEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFL 370
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G IS +L V++
Sbjct: 371 TMMARKMKDTDSEEE-------------------IREAFRVFGKDGNGYISAAQLRHVMT 411
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E +MIR+ +DGDG VN+++F +MM A
Sbjct: 412 NLG--EKLTDEEVDEMIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
E K F+ FDKDGDG IT EL +R+L T+ E +M++++D +G+G ++F EF
Sbjct: 10 TEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFL 69
Query: 114 -MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
M+ M D +E+ G +S EL V++
Sbjct: 70 GMMARKMKDTDNEEE-------------------IREAFRVFDKDGNGFVSAAELRHVMT 110
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG E E +MIR D DGDG VN++EF R++
Sbjct: 111 RLG--EKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 37/97 (38%)
Query: 53 KAELKRVFATFD-------------------------------------KDGDGFITKTE 75
+AEL+ + + D KDG+GF++ E
Sbjct: 45 EAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAE 104
Query: 76 LVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
L + L ++D E +EM+ D +GDG + ++EF
Sbjct: 105 LRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 141
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL R+L T+ E ++ + +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFL 70
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
R+ K G IS EL V +
Sbjct: 71 TXXA------RKXK------------DTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN 112
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E + IR+ D+DGDG VN++EF + A
Sbjct: 113 LG--EKLTDEEVDQXIREADIDGDGQVNYEEFVQXXTA 148
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL NL +TD E ++ + + D +GDG + ++EF
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
Query: 113 CM 114
Sbjct: 143 VQ 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL R+L T+ E ++ + +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFL 69
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
R+ K G IS EL V +
Sbjct: 70 TXXA------RKXK------------DTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN 111
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E + IR+ D+DGDG VN++EF + A
Sbjct: 112 LG--EKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTA 147
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL NL +TD E +E + + D +GDG + ++EF
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Query: 113 CM 114
Sbjct: 142 VQ 143
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL R+L T+ E ++ + +VDA+G+G I F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFL 69
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
E+ G IS EL V +
Sbjct: 70 TXXARCXKDTDSEE------------------EIREAFRVFDKDGNGYISAAELRHVXTN 111
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
LG E E + IR+ D+DGDG VN++EF + A
Sbjct: 112 LG--EKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 46 SRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDG 105
S + + AE K F FDK+G G I EL +R L T+ E ++++A+ + N +G
Sbjct: 2 SELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNG 61
Query: 106 LIEFDEFC-MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISV 164
+ F EFC ++ + M D +E+ G IS
Sbjct: 62 QLNFTEFCGIMAKQMRETDTEEE-------------------MREAFKIFDRDGDGFISP 102
Query: 165 EELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
EL V+ LG E E +MIR+ D DGDGM+N++EF M+
Sbjct: 103 AELRFVMINLG--EKVTDEEIDEMIREADFDGDGMINYEEFVWMI 145
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
S + + K F FDKDGDG IT EL +R+L T+ E ++M+++VDA+G+G IE
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 109 FDEFCML 115
FDEF L
Sbjct: 65 FDEFLSL 71
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+VEEL V+ +L N E + MI +VD DG+G + FDEF +M
Sbjct: 25 GCITVEELATVIRSLDQNPTE--EELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
S + + K F FDKDGDG IT EL +R+L T+ E ++M+++VDA+G+G IE
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 109 FDEFCML 115
FDEF L
Sbjct: 65 FDEFLSL 71
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+VEEL V+ +L N E + MI +VD DG+G + FDEF +M
Sbjct: 25 GCITVEELATVIRSLDQNPTE--EELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 25/172 (14%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANG 103
G S + + AE K FA FDKD +G I+ +EL +R+L L ++ E +++ ++D +G
Sbjct: 1 GSSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDG 60
Query: 104 DGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIS 163
+ IEF EF L + + E+ GLIS
Sbjct: 61 NHQIEFSEFLALMSRQLKSNDSEQ------------------ELLEAFKVFDKNGDGLIS 102
Query: 164 VEELGLVLSALGLNEGNKIENCK--KMIRKVDVDGDGMVNFDEFRRMMKAGG 213
EL VL+++ G K+ + + M+R+V DG G +N +F ++ G
Sbjct: 103 AAELKHVLTSI----GEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGS 149
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF-C 113
EL F FDK+GDG I+ EL L ++ +TD E ++M+ +V ++G G I +F
Sbjct: 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQFAA 143
Query: 114 MLYEGMMGGDRQ 125
+L +G G R+
Sbjct: 144 LLSKGSSTGTRR 155
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+GDG I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 114 ML 115
+
Sbjct: 70 TM 71
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DGDG ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGDGTIDFPEFLTMM 72
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ +DKDGDG IT EL +R+L L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 MLYEGMM 120
+ +M
Sbjct: 70 TMMARIM 76
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LGLN + MI +VD DG+G ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGLNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
E++ F FD+DG+GFI+K EL ++R+L M ++E E ++ ++D +GDG ++F+EF
Sbjct: 37 EIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVT 96
Query: 115 L 115
L
Sbjct: 97 L 97
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G IS +ELG + +LG N++E + +I+++D+DGDG V+F+EF
Sbjct: 51 GFISKQELGTAMRSLGYMP-NEVE-LEVIIQRLDMDGDGQVDFEEF 94
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF- 112
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 113 CMLYEGMMGGDRQEK 127
M+ M D +E+
Sbjct: 70 TMMARKMKDTDSEEE 84
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 ML 115
+
Sbjct: 70 TM 71
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 114 ML 115
+
Sbjct: 71 TM 72
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF MM
Sbjct: 26 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 ML 115
+
Sbjct: 70 TM 71
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
+ +K E++ F FD DG G I EL ++R L E ++M+A +D +G G I+
Sbjct: 3 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 109 FDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELG 168
F+EF + MG G IS + L
Sbjct: 63 FEEFLQMMTAKMG------------------ERDSREEIMKAFRLFDDDETGKISFKNLK 104
Query: 169 LVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
V LG N + E ++MI + D DGDG VN +EF R+MK
Sbjct: 105 RVAKELGENMTD--EELQEMIDEADRDGDGEVNEEEFFRIMK 144
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EL + + ALG K E KKMI +D DG G ++F+EF +MM A
Sbjct: 23 GTIDAKELKVAMRALGFE--PKKEEIKKMIADIDKDGSGTIDFEEFLQMMTA 72
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 ML 115
+
Sbjct: 70 TM 71
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 ML 115
+
Sbjct: 70 TM 71
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 ML 115
+
Sbjct: 70 TM 71
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 ML 115
+
Sbjct: 70 TM 71
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF MM
Sbjct: 25 GTITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
+E K F+ FDKDGDG IT EL +R+L T+ E ++M+ +VDA+G+G I+F EF
Sbjct: 10 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 114 ML 115
L
Sbjct: 70 NL 71
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ +ELG V+ +LG N + MI +VD DG+G ++F EF +M
Sbjct: 25 GCITTKELGTVMRSLGQNPTEA--ELQDMINEVDADGNGTIDFPEFLNLM 72
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K FA FDKD +G I+ +EL +R+L L ++ E +++ ++D +G+ IEF EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
L + + E+ GLIS EL VL++
Sbjct: 70 ALMSRQLKSNDSEQ------------------ELLEAFKVFDKNGDGLISAAELKHVLTS 111
Query: 174 LGLNEGNKIENCK--KMIRKVDVDGDGMVNFDEFRRMM 209
+ G K+ + + M+R+V DG G +N +F ++
Sbjct: 112 I----GEKLTDAEVDDMLREV-SDGSGEINIQQFAALL 144
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
S + EL F FDK+GDG I+ EL L ++ +TD E ++M+ +V ++G G I
Sbjct: 78 SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEIN 136
Query: 109 FDEFCML 115
+F L
Sbjct: 137 IQQFAAL 143
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
EL+ F FDKD DG+I +L +R + M T+ME E+ +++ N G ++FD+F
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA- 173
L MG G IS EL + A
Sbjct: 72 L----MG----------PKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRAL 117
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG G++ + +++IR VD++GDG V+F+EF RMM
Sbjct: 118 LGHQVGHR--DIEEIIRDVDLNGDGRVDFEEFVRMM 151
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
++ M D + K G I +EELG +L A
Sbjct: 80 VMMVRQMKEDAKGK---------------SEEELANCFRIFDKNADGFIDIEELGEILRA 124
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G E E+ + +++ D + DG ++FDEF +MM+
Sbjct: 125 TG--EHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL F FDK+ DGFI EL E LR VT+ + E+++ D N DG I+FDEF
Sbjct: 95 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 113 CMLYEGM 119
+ EG+
Sbjct: 155 LKMMEGV 161
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 17/158 (10%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 17 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
++ M D + K G I +EELG +L A
Sbjct: 77 VMMVRQMKEDAKGK---------------SEEELANCFRIFDKNADGFIDIEELGEILRA 121
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G E E+ + +++ D + DG ++FDEF +MM+
Sbjct: 122 TG--EHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 157
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL F FDK+ DGFI EL E LR VT+ + E+++ D N DG I+FDEF
Sbjct: 92 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 151
Query: 113 CMLYEGMM 120
+ EG+
Sbjct: 152 LKMMEGVQ 159
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
++ M D + K G I +EELG +L A
Sbjct: 80 VMMVRQMKEDAKGK---------------SEEELADCFRIFDKNADGFIDIEELGEILRA 124
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G E E+ + +++ D + DG ++FDEF +MM+
Sbjct: 125 TG--EHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL F FDK+ DGFI EL E LR VT+ + E+++ D N DG I+FDEF
Sbjct: 95 EEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 113 CMLYEGM 119
+ EG+
Sbjct: 155 LKMMEGV 161
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 113 CML 115
+
Sbjct: 61 VQM 63
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS EL V++ LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 17 GYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 66
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
++ M D + K G I +EELG +L A
Sbjct: 80 VMMVRQMKEDAKGK---------------SEEELEDCFRIFDKNADGFIDIEELGEILRA 124
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G E E+ + +++ D + DG ++FDEF +MM+
Sbjct: 125 TG--EHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL+ F FDK+ DGFI EL E LR VT+ + E+++ D N DG I+FDEF
Sbjct: 95 EEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 113 CMLYEGM 119
+ EG+
Sbjct: 155 LKMMEGV 161
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 113 CML 115
+
Sbjct: 64 VQM 66
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS EL V++ LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 20 GYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Query: 113 CML 115
+
Sbjct: 64 VQM 66
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL V++ LG E E +MIR+ D+DGDG VN++EF +MM
Sbjct: 20 GYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ ELK F FDKD +GFI+ EL + NL +TD E +EM+ + D +GDG I ++EF
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
Query: 113 C 113
Sbjct: 63 V 63
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS EL V++ LG E E +MIR+ DVDGDG +N++EF ++M A
Sbjct: 19 GFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 68
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Query: 113 CML 115
+
Sbjct: 65 VQM 67
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS EL V++ LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 21 GYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 70
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Query: 113 CML 115
+
Sbjct: 68 VQM 70
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS EL V++ LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 24 GYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 73
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Query: 113 CML 115
+
Sbjct: 67 VQM 69
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS EL V++ LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 23 GYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 72
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE--- 111
+++R+F FD +GDG I+ +EL ++LR L D E + M+A++D +GDG I+F+E
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 112 FCMLYEGMM 120
FC G+M
Sbjct: 62 FCNANPGLM 70
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGGVLL 216
G IS+ EL L LG ++++ +M+ ++D DGDG ++F+EF A L+
Sbjct: 17 GKISLSELTDALRTLGSTSADEVQ---RMMAEIDTDGDGFIDFNEFISFCNANPGLM 70
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE--- 111
+++R+F FD +GDG I+ +EL ++LR L D E + M+A++D +GDG I+F+E
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 112 FCMLYEGMM 120
FC G+M
Sbjct: 63 FCNANPGLM 71
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGGVLL 216
G IS+ EL L LG ++++ +M+ ++D DGDG ++F+EF A L+
Sbjct: 18 GKISLSELTDALRTLGSTSADEVQ---RMMAEIDTDGDGFIDFNEFISFCNANPGLM 71
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
KAE +R+F FD +GDG I+ EL E+L+ L + D E + M+A++D +GDG I F EF
Sbjct: 8 KAERERIFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISFQEF 66
Query: 113 C 113
Sbjct: 67 T 67
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGGVLL 216
G IS ELG L LG +++ K M+ ++D DGDG ++F EF +A LL
Sbjct: 24 GKISAAELGEALKTLGSITPDEV---KHMMAEIDTDGDGFISFQEFTDFGRANRGLL 77
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDM 90
E+K + A D DGDGFI+ E + R R ++ D+
Sbjct: 45 EVKHMMAEIDTDGDGFISFQEFTDFGRANRGLLKDV 80
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
++ M D + K G I +EELG +L A
Sbjct: 80 VMMVRQMKEDAKGK---------------SEEELANCFRIFDKNADGFIDIEELGEILRA 124
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G E E+ + +++ D + DG ++FDEF +MM+
Sbjct: 125 TG--EHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL F FDK+ DGFI EL E LR V + + E+++ D N DG I+FDEF
Sbjct: 95 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 113 CMLYEGM 119
+ EG+
Sbjct: 155 LKMMEGV 161
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
ELK F FDKD +G+I+ +EL + NL +TD E E+M+ + D +GDG + ++EF
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 115 L 115
+
Sbjct: 70 M 70
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL V+ LG E E ++MI++ D+DGDG VN++EF +MM
Sbjct: 24 GYISASELRHVMINLG--EKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 11 LFIAGFINIFVYFPTKKFYAWIQSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGF 70
L+ G I+I V K + ++ F K A T +++ Y +LK F D++G G
Sbjct: 14 LYFQGKIDIHVLENFKNYALMLR--FQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGN 71
Query: 71 ITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXX 130
ITK +L + L LM+ + ++ ++D++G G I++ EF DR++
Sbjct: 72 ITKLQLRKGLERSGLMLPP-NFDLLLDQIDSDGSGNIDYTEFL-----AAAIDRRQ---- 121
Query: 131 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGN----KIENCK 186
G I+ EL VL G GN + K
Sbjct: 122 -----------LSKKLIYCAFRVFDVDNDGEITTAELAHVLFN-GNKRGNITERDVNQVK 169
Query: 187 KMIRKVDVDGDGMVNFDEFRRMMK 210
KMIR+VD +GDG ++F EF MMK
Sbjct: 170 KMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K FA FDKD G I+ +EL +R+L L ++ E +++ ++D +G+ IEF EF
Sbjct: 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFL 70
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
L + + E+ GLIS EL VL++
Sbjct: 71 ALMSRQLKCNDSEQ------------------ELLEAFKVFDKNGDGLISAAELKHVLTS 112
Query: 174 LGLNEGNKIENCK--KMIRKVDVDGDGMVNFDEFRRMM 209
+ G K+ + + +M+R+V DG G +N +F ++
Sbjct: 113 I----GEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ ELK F FDKD +G+I+ +EL + NL +TD E E+M+ + D +GDG + ++EF
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEF 62
Query: 113 CML 115
+
Sbjct: 63 VKM 65
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL V+ LG E E ++MI++ D+DGDG VN++EF +MM
Sbjct: 19 GYISASELRHVMINLG--EKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
EL+ F FDKD DG+I +L +R + M T+ME E+ +++ N G ++FD+F
Sbjct: 26 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 85
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA- 173
L MG G IS EL +
Sbjct: 86 L----MG----------PKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 131
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG G++ + +++IR VD++GDG V+F+EF RMM
Sbjct: 132 LGHQVGHR--DIEEIIRDVDLNGDGRVDFEEFVRMM 165
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
EL+ F FDKD DG+I +L +R + M T+ME E+ +++ N G ++FD+F
Sbjct: 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA- 173
L MG G IS EL +
Sbjct: 72 L----MG----------PKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKL 117
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LG G++ + +++IR VD++GDG V+F+EF RMM
Sbjct: 118 LGHQVGHR--DIEEIIRDVDLNGDGRVDFEEFVRMM 151
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K FA FDKD +G I+ +EL +R+L L ++ E +++ ++D +G+ IEF EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 114 MLYEGMMGGDRQEK 127
L + + E+
Sbjct: 70 ALMSRQLKSNDSEQ 83
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL V+ +LGL+ ++ ++DVDG+ + F EF +M
Sbjct: 25 GSISSSELATVMRSLGLSPSEA--EVNDLMNEIDVDGNHQIEFSEFLALM 72
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAE 93
S + EL F FDK+GDG I+ EL L ++ +TD E E
Sbjct: 78 SNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K FA FDKD +G I+ +EL +R+L L ++ E +++ ++D +G+ IEF EF
Sbjct: 10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 114 ML 115
L
Sbjct: 70 AL 71
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL V+ +LGL+ ++ ++DVDG+ + F EF +M
Sbjct: 25 GSISSSELATVMRSLGLSPSEA--EVNDLMNEIDVDGNHQIEFSEFLALM 72
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
A+ +R+F FD +GDG I+ +EL ++L+ L + D E M+A++D +GDG I FDEF
Sbjct: 11 ADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFISFDEFT 69
Query: 114 MLYEGMMG 121
G
Sbjct: 70 DFARANRG 77
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS ELG L LG +++ ++M+ ++D DGDG ++FDEF +A
Sbjct: 26 GKISSSELGDALKTLGSVTPDEV---RRMMAEIDTDGDGFISFDEFTDFARA 74
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDM 90
E++R+ A D DGDGFI+ E + R R +V D+
Sbjct: 47 EVRRMMAEIDTDGDGFISFDEFTDFARANRGLVKDV 82
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F FDKDG+G+I+ +L + NL +TD E +EM+ + D +GDG + +++F
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65
Query: 113 CML 115
+
Sbjct: 66 VQM 68
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS +L V++ LG E E +MIR+ D+DGDG VN+++F +MM A
Sbjct: 22 GYISAADLRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEDFVQMMTA 71
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FD++ DG+I EL E R VTD E E ++ D N DG I+FDEF
Sbjct: 92 EEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
Query: 113 CMLYEGMM 120
+ EG+
Sbjct: 152 LKMMEGVQ 159
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
++ M D + K G I EEL + A
Sbjct: 77 VMMVRQMKEDAKGK---------------SEEELAELFRIFDRNADGYIDAEELAEIFRA 121
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G E E + +++ D + DG ++FDEF +MM+
Sbjct: 122 SG--EHVTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E++ F DKDG+G+I+ EL + NL +TD E +EM+ + D +GDG + ++EF
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 87
Query: 113 CML 115
+
Sbjct: 88 VQM 90
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G IS EL V++ LG E E +MIR+ D+DGDG VN++EF +MM A
Sbjct: 44 GYISAAELRHVMTNLG--EKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL F FD++ DG+I EL E R VTD E E ++ D N DG I+FDEF
Sbjct: 92 EEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
Query: 113 CMLYEGMM 120
+ EG+
Sbjct: 152 LKMMEGVQ 159
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 17 AEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFL 76
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
++ M D + K G I EEL + A
Sbjct: 77 VMMVRQMKEDAKGK---------------SEEELAECFRIFDRNADGYIDAEELAEIFRA 121
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G E E + +++ D + DG ++FDEF +MM+
Sbjct: 122 SG--EHVTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL F FD+DG+G I+ EL + NL +TD E +EM+ + D +GDG I ++EF
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 66
Query: 113 CML 115
+
Sbjct: 67 VRM 69
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
GLIS EL V++ LG E + +MIR+ D+DGDG +N++EF RMM
Sbjct: 23 GLISAAELRHVMTNLG--EKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 26/179 (14%)
Query: 36 FSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEM 95
F K A T +++ Y +LK F D+DG G+ITK +L + L L + + +
Sbjct: 34 FQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLL 92
Query: 96 VAKVDANGDGLIEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+ ++D++G G I++ EF DR++
Sbjct: 93 LDQIDSDGSGKIDYTEFI-----AAALDRKQ---------------LSKKLIYCAFRVFD 132
Query: 156 XXXXGLISVEELGLVLSALGLNEGN----KIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G I+ EL +L G +GN + K+MIR VD + DG ++F EF MMK
Sbjct: 133 VDNDGEITTAELAHILYN-GNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
+ +K E++ F FD DG G I EL ++R L E ++M++++D +G G I+
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 109 FDEFCMLYEGMMGG-DRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEEL 167
F+EF + MG D +E+ G I++++L
Sbjct: 83 FEEFLTMMTAKMGERDSREE-------------------ILKAFRLFDDDNSGTITIKDL 123
Query: 168 GLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
V LG N E ++MI + D + D ++ DEF R+MK
Sbjct: 124 RRVAKELGENLTE--EELQEMIAEADRNDDNEIDEDEFIRIMK 164
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EL + + ALG K E KKMI ++D DG G ++F+EF MM A
Sbjct: 43 GTIDAKELKVAMRALGFE--PKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA 92
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRN-LRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
EL+ F FD +GDG I+ +EL E++R L V + EE++ VD NGDG ++F+EF
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
Query: 114 ML 115
+
Sbjct: 68 RM 69
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 160 GLISVEELGLVLSAL-GLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL + L G G++ + +++IR VD++GDG V+F+EF RMM
Sbjct: 22 GEISTSELREAMRKLLGHQVGHR--DIEEIIRDVDLNGDGRVDFEEFVRMM 70
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL F FDK+ DGFI EL E LR V + + E+++ D N DG I+FDEF
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
Query: 113 CMLYEGMM 120
+ EG+
Sbjct: 69 LKMMEGVQ 76
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EELG +L A G E E+ + +++ D + DG ++FDEF +MM+
Sbjct: 25 GFIDIEELGEILRATG--EHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 74
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 40/180 (22%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLM-----------VTDMEA 92
G TS + EL +F DK+GDG + + EL+E + L M + E
Sbjct: 325 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 384
Query: 93 EEMVAKVDANGDGLIEFDEF---CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXX 149
++++ VD + +G IE+ EF M + ++ +R E+
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLER---------------------- 422
Query: 150 XXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL + ++ E K ++ +VD + DG V+FDEF++M+
Sbjct: 423 AFRMFDSDNSGKISSTELATIFGVSDVDS----ETWKSVLSEVDKNNDGEVDFDEFQQML 478
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 42 TTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAE---EMVAK 98
T R + + L+R F FD D G I+ TEL V+D+++E ++++
Sbjct: 406 TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFG-----VSDVDSETWKSVLSE 460
Query: 99 VDANGDGLIEFDEFCML 115
VD N DG ++FDEF +
Sbjct: 461 VDKNNDGEVDFDEFQQM 477
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 40/180 (22%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLM-----------VTDMEA 92
G TS + EL +F DK+GDG + + EL+E + L M + E
Sbjct: 349 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 408
Query: 93 EEMVAKVDANGDGLIEFDEF---CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXX 149
++++ VD + +G IE+ EF M + ++ +R E+
Sbjct: 409 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLER---------------------- 446
Query: 150 XXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL + ++ E K ++ +VD + DG V+FDEF++M+
Sbjct: 447 AFRMFDSDNSGKISSTELATIFGVSDVDS----ETWKSVLSEVDKNNDGEVDFDEFQQML 502
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 42 TTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAE---EMVAK 98
T R + + L+R F FD D G I+ TEL V+D+++E ++++
Sbjct: 430 TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI-----FGVSDVDSETWKSVLSE 484
Query: 99 VDANGDGLIEFDEFCML 115
VD N DG ++FDEF +
Sbjct: 485 VDKNNDGEVDFDEFQQM 501
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 40/180 (22%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLM-----------VTDMEA 92
G TS + EL +F DK+GDG + + EL+E + L M + E
Sbjct: 348 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 407
Query: 93 EEMVAKVDANGDGLIEFDEF---CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXX 149
++++ VD + +G IE+ EF M + ++ +R E+
Sbjct: 408 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLER---------------------- 445
Query: 150 XXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL + ++ E K ++ +VD + DG V+FDEF++M+
Sbjct: 446 AFRMFDSDNSGKISSTELATIFGVSDVDS----ETWKSVLSEVDKNNDGEVDFDEFQQML 501
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 42 TTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAE---EMVAK 98
T R + + L+R F FD D G I+ TEL V+D+++E ++++
Sbjct: 429 TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI-----FGVSDVDSETWKSVLSE 483
Query: 99 VDANGDGLIEFDEFCML 115
VD N DG ++FDEF +
Sbjct: 484 VDKNNDGEVDFDEFQQM 500
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 40/181 (22%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLM----VTDMEAEEMVAKV 99
G T+ + EL ++F D +GDG + + EL+E R L V+D+++ ++ A+V
Sbjct: 304 GSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEV 363
Query: 100 DA-------NGDGLIEFDEF---CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXX 149
D + +G IE+ EF CM + ++ +R
Sbjct: 364 DHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRER----------------------LLA 401
Query: 150 XXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ EELG + +++ E +++++ D + DG V+F+EF MM
Sbjct: 402 AFQQFDSDGSGKITNEELGRLFGVTEVDD----ETWHQVLQECDKNNDGEVDFEEFVEMM 457
Query: 210 K 210
+
Sbjct: 458 Q 458
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANG 103
GE + EL+ F +DK+G+G+I+ + E L L ++ + + M+ ++DA+G
Sbjct: 81 GEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADG 140
Query: 104 DGLIEFDEFCMLYEGMMGGDR 124
G ++F+EF + M GGD
Sbjct: 141 SGTVDFEEFMGV---MTGGDE 158
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAG 212
G IS + + +L+ L +E E+ MI ++D DG G V+F+EF +M G
Sbjct: 106 GYISTDVMREILAEL--DETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG 156
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFR 206
G +S +++G++L LG+ + +++I + D G+G ++FD F+
Sbjct: 29 GRVSTDQIGIILEVLGIQQTKS--TIRQLIDEFDPFGNGDIDFDSFK 73
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
EL+ F FDKD DG+I +L +R + M T+ME E+ +++ N G ++FD+F
Sbjct: 11 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 70
Query: 115 L 115
L
Sbjct: 71 L 71
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 40/181 (22%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRL----MVTDMEAEEMVAKV 99
G T+ + EL ++F D +GDG + + EL+E R L V+D+++ ++ A+V
Sbjct: 30 GSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEV 89
Query: 100 DA-------NGDGLIEFDEF---CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXX 149
D + +G IE+ EF CM + ++ +R
Sbjct: 90 DHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRER----------------------LLA 127
Query: 150 XXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ EELG + +++ E +++++ D + DG V+F+EF MM
Sbjct: 128 AFQQFDSDGSGKITNEELGRLFGVTEVDD----ETWHQVLQECDKNNDGEVDFEEFVEMM 183
Query: 210 K 210
+
Sbjct: 184 Q 184
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 42 TTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDA 101
T R S K +L+ F FD+DG+G I+ EL S+ L + + +EM++ +D+
Sbjct: 414 TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELA-SVFGLDHLESKT-WKEMISGIDS 471
Query: 102 NGDGLIEFDEFCMLYEGMMGGD 123
N DG ++F+EFC + + + +
Sbjct: 472 NNDGDVDFEEFCKMIQKLCSNN 493
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 37/174 (21%)
Query: 48 TSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLR--------LMVTDMEAEEMVAKV 99
TS + EL +F DK+GDG + + EL++ L L + E + ++
Sbjct: 340 TSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAA 399
Query: 100 DANGDGLIEFDEF---CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 156
D + +G I++ EF M + ++ D+ E
Sbjct: 400 DFDRNGYIDYSEFVTVAMDRKSLLSKDKLE----------------------SAFQKFDQ 437
Query: 157 XXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G ISV+EL S GL+ + K+MI +D + DG V+F+EF +M++
Sbjct: 438 DGNGKISVDELA---SVFGLDHLES-KTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 42 TTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDA 101
T R S K +L+ F FD+DG+G I+ EL S+ L + + +EM++ +D+
Sbjct: 131 TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELA-SVFGLDHLESKT-WKEMISGIDS 188
Query: 102 NGDGLIEFDEFCMLYEGMMGGDRQE 126
N DG ++F+EFC + + + + +
Sbjct: 189 NNDGDVDFEEFCKMIQKLCSNNEPQ 213
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 37/174 (21%)
Query: 48 TSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLR--------LMVTDMEAEEMVAKV 99
TS + EL +F DK+GDG + + EL++ L L + E + ++
Sbjct: 57 TSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAA 116
Query: 100 DANGDGLIEFDEF---CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 156
D + +G I++ EF M + ++ D+ E
Sbjct: 117 DFDRNGYIDYSEFVTVAMDRKSLLSKDKLE----------------------SAFQKFDQ 154
Query: 157 XXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G ISV+EL S GL+ + + K+MI +D + DG V+F+EF +M++
Sbjct: 155 DGNGKISVDELA---SVFGLDHL-ESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 204
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 37/177 (20%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVES---LRNLR-----LMVTDMEAEEM 95
G T+ ++ EL +F DK+GDG + K EL+E LRN + L + E + +
Sbjct: 345 GSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNI 404
Query: 96 VAKVDANGDGLIEFDEF---CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXX 152
+ +VD + +G IE+ EF CM + + +R +
Sbjct: 405 LKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRR----------------------AFN 442
Query: 153 XXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+ EEL + ++E + ++ + D + D M++FDEF MM
Sbjct: 443 LFDTDKSGKITKEELANLFGLTSISE----KTWNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
+ +K E++ F FD DG G I EL ++R L E ++M++++D G G +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 109 FDEF-CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEEL 167
F +F ++ + M D +E+ G IS + L
Sbjct: 61 FGDFLTVMTQKMSEKDTKEE-------------------ILKAFKLFDDDETGKISFKNL 101
Query: 168 GLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
V LG N + E ++MI + D DGDG V+ EF R+MK
Sbjct: 102 KRVAKELGENLTD--EELQEMIDEADRDGDGEVSEQEFLRIMK 142
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
+K E++ F FD DG G I EL ++R L E ++M++++D +G G I+F+E
Sbjct: 28 QKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEE 87
Query: 112 FCMLYEGMM 120
F + M
Sbjct: 88 FLTMMTAKM 96
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EL + + ALG K E KKMI ++D DG G ++F+EF MM A
Sbjct: 45 GTIDAKELKVAMRALGFE--PKKEEIKKMISEIDKDGSGTIDFEEFLTMMTA 94
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEK 127
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++ M D + K
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKK 187
G I +EEL ++L A G E ++ ++
Sbjct: 93 ---------------TEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEE 135
Query: 188 MIRKVDVDGDGMVNFDEFRRMMKA 211
+++ D + DG +++DEF MK
Sbjct: 136 LMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 113 CMLYEGM 119
+G+
Sbjct: 154 LEFMKGV 160
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 47 RTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGL 106
+T + E+ F DK+G+G I + EL + L NL +T E EE++ +V +GDG
Sbjct: 69 KTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGA 128
Query: 107 IEFDEFC-MLYEG 118
I ++ F ML G
Sbjct: 129 INYESFVDMLVTG 141
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 26/160 (16%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFD--EF 112
+++ F FDKD DG ++ EL +LR+L T+ E + +++A EFD F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAK-----EFDLATF 60
Query: 113 CMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLS 172
+Y + ++ G I EL +L
Sbjct: 61 KTVYRKPIKTPTEQS-----------------KEMLDAFRALDKEGNGTIQEAELRQLL- 102
Query: 173 ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAG 212
L L + ++++++V V GDG +N++ F M+ G
Sbjct: 103 -LNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTG 141
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEK 127
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++ M D + K
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKK 187
G I +EEL ++L A G E ++ ++
Sbjct: 93 ---------------SEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEE 135
Query: 188 MIRKVDVDGDGMVNFDEFRRMMKA 211
+++ D + DG +++DEF MK
Sbjct: 136 LMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 113 CMLYEGM 119
+G+
Sbjct: 154 LEFMKGV 160
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEK 127
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++ M D + K
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKK 187
G I +EEL ++L A G E ++ ++
Sbjct: 93 ---------------TEEELSDLFRMFDKNADGYIDLEELKIMLQATG--ETITEDDIEE 135
Query: 188 MIRKVDVDGDGMVNFDEFRRMMKA 211
+++ D + DG +++DEF MK
Sbjct: 136 LMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 113 CMLYEGM 119
+G+
Sbjct: 154 LEFMKGV 160
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL+ F +DK+G+G+I+ + E L L ++ + + M+ ++DA+G G ++F+EF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 113 CMLYEGMMGGDR 124
+ M GGD
Sbjct: 62 MGV---MTGGDE 70
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAG 212
G IS + + +L+ L +E E+ MI ++D DG G V+F+EF +M G
Sbjct: 18 GYISTDVMREILAEL--DETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGG 68
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 47 RTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGL 106
RT + ++R F FDKDG G I+ EL + + E E ++ +VD N DG
Sbjct: 410 RTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGE 469
Query: 107 IEFDEF 112
++F+EF
Sbjct: 470 VDFNEF 475
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 48/214 (22%)
Query: 14 AGFINIFVYFPTKKFYAWIQSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITK 73
+ NI + KK + + TT E++ +L +F D + DG + +
Sbjct: 298 SAMTNIRQFQAEKKLAQAALLYMASKLTTLDETK-------QLTEIFRKLDTNNDGMLDR 350
Query: 74 TELVESLRN-LRLMVTDMEA-------------EEMVAKVDANGDGLIEFDEF---CMLY 116
ELV +RL D + + ++ +D +G G IE+ EF +
Sbjct: 351 DELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDR 410
Query: 117 EGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGL 176
++ +R E+ G IS +EL + S
Sbjct: 411 TILLSRERMER----------------------AFKMFDKDGSGKISTKELFKLFSQ--A 446
Query: 177 NEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
+ ++E + +I +VD + DG V+F+EF M++
Sbjct: 447 DSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 29 YAWIQSFFSKTATTTG----ESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLR 84
+ WIQ + S+T T + ES + ++ + ++ A + L+ L
Sbjct: 277 HPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLA-----------QAALLYMASKLT 325
Query: 85 LMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMM 120
+ + E+ K+D N DG+++ DE Y M
Sbjct: 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFM 361
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEK 127
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++ M D + K
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKK 187
G I ++EL ++L A G E ++ ++
Sbjct: 93 ---------------SEEELSDLFRMXDKNADGYIDLDELKIMLQATG--ETITEDDIEE 135
Query: 188 MIRKVDVDGDGMVNFDEFRRMMKA 211
+++ D + DG +++DEF MK
Sbjct: 136 LMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 48 TSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLI 107
+ + EL +F DK+ DG+I EL L+ +T+ + EE++ D N DG I
Sbjct: 89 SKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
Query: 108 EFDEFCMLYEGM 119
++DEF +G+
Sbjct: 149 DYDEFLEFMKGV 160
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEK 127
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++ M D + K
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKK 187
G I ++EL ++L A G E ++ ++
Sbjct: 93 ---------------SEEELSDLFRMWDKNADGYIDLDELKIMLQATG--ETITEDDIEE 135
Query: 188 MIRKVDVDGDGMVNFDEFRRMMKA 211
+++ D + DG +++DEF MK
Sbjct: 136 LMKDGDKNNDGRIDYDEFLEFMKG 159
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F +DK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 94 EEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Query: 113 CMLYEGM 119
+G+
Sbjct: 154 LEFMKGV 160
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 40/180 (22%)
Query: 44 GESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLR-----------LMVTDMEA 92
G TS + EL +F DK+GDG + + EL+E + L + E
Sbjct: 325 GSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEV 384
Query: 93 EEMVAKVDANGDGLIEFDEFCML---YEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXX 149
++++ VD + +G IE+ EF + + ++ +R E+
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLER---------------------- 422
Query: 150 XXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS EL + ++ E K ++ +VD + DG V+FDEF++ +
Sbjct: 423 AFRXFDSDNSGKISSTELATIFGVSDVDS----ETWKSVLSEVDKNNDGEVDFDEFQQXL 478
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 42 TTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAE---EMVAK 98
T R + + L+R F FD D G I+ TEL V+D+++E ++++
Sbjct: 406 TVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI-----FGVSDVDSETWKSVLSE 460
Query: 99 VDANGDGLIEFDEF 112
VD N DG ++FDEF
Sbjct: 461 VDKNNDGEVDFDEF 474
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GSISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
++ L F+ FDKDG G+IT E+ ++ ++ L D+ ++M+ ++D + DG I++ E
Sbjct: 80 REENLVSAFSYFDKDGSGYITLDEIQQACKDFGL--DDIHIDDMIKEIDQDNDGQIDYGE 137
Query: 112 FCML 115
F +
Sbjct: 138 FAAM 141
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 23/164 (14%)
Query: 47 RTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGL 106
R S + LK +F D D G IT EL + L+ + + + E ++++ D + G
Sbjct: 3 RLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGT 62
Query: 107 IEFDEFCMLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEE 166
I++ EF + +R+E G I+++E
Sbjct: 63 IDYGEFIAATVHLNKLEREENLVSAFSYFDKDGS-------------------GYITLDE 103
Query: 167 LGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
+ GL++ + MI+++D D DG +++ EF MM+
Sbjct: 104 IQQACKDFGLDD----IHIDDMIKEIDQDNDGQIDYGEFAAMMR 143
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GCISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 52 KKAELKRVFATFDKDG-DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFD 110
+K E K F F + DG I+ EL + +R L T E +EM+ +VD +G G ++FD
Sbjct: 16 QKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Query: 111 EFCML 115
EF ++
Sbjct: 76 EFLVM 80
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GSISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GCISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GCISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 52 KKAELKRVFATFDKDG-DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFD 110
+K E K F F +D DG I+ EL + +R L T E +EM+ +VD +G G ++FD
Sbjct: 16 QKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Query: 111 EFCMLYEGMMGGD 123
EF ++ M D
Sbjct: 76 EFLVMMVRCMKDD 88
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GSISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GCISTKELGKVMRMLGQNP--TPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 52 KKAELKRVFATFDKDG-DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFD 110
+K E K F F +D DG I+ EL + +R L T E +EM+ +VD +G G ++FD
Sbjct: 16 QKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Query: 111 EFCMLYEGMMGGD 123
EF ++ M D
Sbjct: 76 EFLVMMVRCMKDD 88
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 59 VFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
F FDKDG G+IT EL ++ V D+ EE+ VD + DG I+++EF
Sbjct: 104 AFTYFDKDGSGYITPDELQQACE--EFGVEDVRIEELXRDVDQDNDGRIDYNEF 155
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 23/161 (14%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
A LK F D D G IT EL L+ + + + E ++ D + G I++ EF
Sbjct: 27 AGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFI 86
Query: 114 MLYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSA 173
+ +R++ G I+ +EL
Sbjct: 87 AATLHLNKIEREDH-------------------LFAAFTYFDKDGSGYITPDELQQACEE 127
Query: 174 LGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGGV 214
G+ E +IE ++ R VD D DG ++++EF + G +
Sbjct: 128 FGV-EDVRIE---ELXRDVDQDNDGRIDYNEFVAXXQKGSI 164
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLR-----NLRLMVTDMEAEEMVAKVDANGDGL 106
K+ +L+ F +D D DG+I+ EL + L+ NL+ ++ + D +GDG
Sbjct: 87 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGR 146
Query: 107 IEFDEFCMLYEGM 119
I F+EFC + G+
Sbjct: 147 ISFEEFCAVVGGL 159
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLR-----NLRLMVTDMEAEEMVAKVDANGDGL 106
K+ +L+ F +D D DG+I+ EL + L+ NL+ ++ + D +GDG
Sbjct: 88 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGR 147
Query: 107 IEFDEFCMLYEGM 119
I F+EFC + G+
Sbjct: 148 ISFEEFCAVVGGL 160
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLR-----NLRLMVTDMEAEEMVAKVDANGDGL 106
K+ +L+ F +D D DG+I+ EL + L+ NL+ ++ + D +GDG
Sbjct: 73 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGR 132
Query: 107 IEFDEFCMLYEGM 119
I F+EFC + G+
Sbjct: 133 ISFEEFCAVVGGL 145
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GSISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEK 127
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++ M D + K
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKK 187
G I ++EL ++L A G E ++ ++
Sbjct: 93 ---------------SEEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEE 135
Query: 188 MIRKVDVDGDGMVNFDEFRRMMKA 211
+++ D + DG +++DE MK
Sbjct: 136 LMKDGDKNNDGRIDYDEXLEFMKG 159
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 48 TSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLI 107
+ + EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
Query: 108 EFDEFCMLYEGM 119
++DE +G+
Sbjct: 149 DYDEXLEFMKGV 160
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDEF MM
Sbjct: 34 GSISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEFLVMM 81
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGDRQEK 127
DG I+ EL + +R L T E +EM+ +VD +G G ++FDEF ++ M D + K
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALGLNEGNKIENCKK 187
G I ++EL ++L A G E ++ ++
Sbjct: 93 ---------------SEEELSDLFRMFDKNADGYIDLDELKIMLQATG--ETITEDDIEE 135
Query: 188 MIRKVDVDGDGMVNFDEFRRMMKA 211
+++ D + DG +++DE+ MK
Sbjct: 136 LMKDGDKNNDGRIDYDEWLEFMKG 159
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DE+
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEW 153
Query: 113 CMLYEGM 119
+G+
Sbjct: 154 LEFMKGV 160
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLR-----NLRLMVTDMEAEEMVAKVDANGDGL 106
K+ +L+ F +D D DG+I+ EL + L+ NL+ ++ + D +GDG
Sbjct: 74 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGR 133
Query: 107 IEFDEFCMLYEGM 119
I F+EFC + G+
Sbjct: 134 ISFEEFCAVVGGL 146
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFL 79
Query: 114 ML 115
++
Sbjct: 80 VM 81
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N K E +I +VD DG G ++F+EF MM
Sbjct: 35 GDISTKELGTVMRMLGQNP-TKCE-LDAIICEVDEDGSGTIDFEEFLVMM 82
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
+L+ F FD+DGDG IT EL ++ L + E + M+ + D + DG + ++EF
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFAR 66
Query: 115 L 115
+
Sbjct: 67 M 67
Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+V+EL ++ LG + E MIR+ DVD DG VN++EF RM+
Sbjct: 21 GHITVDELRRAMAGLG--QPLPQEELDAMIREADVDQDGRVNYEEFARML 68
Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 182 IENCKKMIRKVDVDGDGMVNFDEFRRMMKAGG 213
+E+ + R D DGDG + DE RR M G
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLG 36
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEE---MVAKVDANGDGLIEFDE 111
++K+VF DKD DGFI + EL L+ D+ A+E ++A D +GDG I +E
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 112 FCML 115
F L
Sbjct: 102 FSTL 105
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDE+ MM
Sbjct: 34 GCISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEWLVMM 81
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGMMGGD 123
DG I+ EL + +R L T E +EM+ +VD +G G ++FDE+ ++ M D
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMARCMKDD 88
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
+E K F FD + GFITK L L+ + V EM + DA G+G I+F EF
Sbjct: 6 SEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFL 65
Query: 114 MLYEGMMG 121
MMG
Sbjct: 66 ----SMMG 69
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
L++ F TFD +G G+I K L ++L NL + E E + + G I +D F
Sbjct: 81 LRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLG-ITETEKGQIRYDNFI 137
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 68
Query: 114 ML 115
++
Sbjct: 69 VM 70
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E +I +VD DG G ++F+EF MM
Sbjct: 24 GDISTKELGTVMRMLGQNPTK--EELDAIIEEVDEDGSGTIDFEEFLVMM 71
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 113 CMLYEGM 119
+G+
Sbjct: 66 LEFMKGV 72
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EEL ++L A G E ++ +++++ D + DG +++DEF MK
Sbjct: 22 GYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 71
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
Query: 113 CMLYEGM 119
+G+
Sbjct: 65 LEFMKGV 71
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I ++EL ++L A G E ++ +++++ D + DG +++DEF MK
Sbjct: 21 GYIDLDELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 70
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 113 CMLYEGM 119
+G+
Sbjct: 64 LEFMKGV 70
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EEL ++L A G E ++ +++++ D + DG +++DEF MK
Sbjct: 20 GYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 69
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E ++MI +VD DG G V+FDE+ MM
Sbjct: 34 GCISTKELGKVMRMLGQN--PTPEELQEMIDEVDEDGSGTVDFDEWLVMM 81
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
DG I+ EL + +R L T E +EM+ +VD +G G ++FDE+ ++
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 113 CMLYEGM 119
+G+
Sbjct: 69 LEFMKGV 75
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EEL ++L A G E ++ +++++ D + DG +++DEF MK
Sbjct: 25 GYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 74
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 33 QSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRL---MVTD 89
++FF+K T+ + ++K+ FA D+D GFI + EL L+N + +TD
Sbjct: 28 KAFFAKVGLTSKSAD-------DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTD 80
Query: 90 MEAEEMVAKVDANGDGLIEFDEFCML 115
E + + D++GDG I DEF L
Sbjct: 81 GETKTFLKAGDSDGDGKIGVDEFTAL 106
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 160 GLISVEELGLVLS-----ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EL L L A L +G K ++ D DGDG + DEF ++KA
Sbjct: 57 GFIEEDELKLFLQNFKADARALTDGE----TKTFLKAGDSDGDGKIGVDEFTALVKA 109
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ EL +F FDK+ DG+I EL L+ +T+ + EE++ D N DG I++DEF
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 113 CMLYEGM 119
+G+
Sbjct: 74 LEFMKGV 80
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EEL ++L A G E ++ +++++ D + DG +++DEF MK
Sbjct: 30 GYIDLEELKIMLQATG--ETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 79
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ EL +R L T E + ++ +VD +G G I+F+EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 114 ML 115
++
Sbjct: 80 VM 81
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS +ELG V+ LG N E +I +VD DG G ++F+EF MM
Sbjct: 35 GDISTKELGTVMRMLGQNPTK--EELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 162 ISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
IS EEL LV+ LG + + +MI +VD +GDG V+F+EF MMK
Sbjct: 24 ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMK 72
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 55 ELKRVFATFD-KDGD-GFITKTELVESLRNL--RLMVTDMEAEEMVAKVDANGDGLIEFD 110
E+K F F K+GD I+K EL ++ L L+ +EM+ +VD NGDG + F+
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 111 EFCML 115
EF ++
Sbjct: 66 EFLVM 70
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRL---MVTDMEAEEMVAKVDANGDGLIEFDE 111
++K+ F D+D GFI + EL L+N +TD E + +A D +GDG+I DE
Sbjct: 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDE 101
Query: 112 FCML 115
F +
Sbjct: 102 FAAM 105
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 160 GLISVEELGLVL-----SALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EL L L SA L + K + D DGDGM+ DEF M+KA
Sbjct: 56 GFIEEDELKLFLQNFSPSARALTDAE----TKAFLADGDKDGDGMIGVDEFAAMIKA 108
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 33 QSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRL---MVTD 89
++FF+K T+ + ++K+ FA D+D GFI + EL L+N + +TD
Sbjct: 27 KAFFAKVGLTSKSAD-------DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTD 79
Query: 90 MEAEEMVAKVDANGDGLIEFDEFCML 115
E + + D++GDG I DE+ L
Sbjct: 80 GETKTFLKAGDSDGDGKIGVDEWTAL 105
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 160 GLISVEELGLVLS-----ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EL L L A L +G K ++ D DGDG + DE+ ++KA
Sbjct: 56 GFIEEDELKLFLQNFKADARALTDGE----TKTFLKAGDSDGDGKIGVDEWTALVKA 108
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEE---MVAKVDANGDGLIEFDE 111
++K+VF DKD GFI + EL L+ D+ A+E ++A D +GDG I +E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 112 FCML 115
F L
Sbjct: 102 FSTL 105
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEE---MVAKVDANGDGLIEFDE 111
++K+VF DKD GFI + EL L+ D+ A+E ++A D +G G IE +E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEE 101
Query: 112 FCML 115
F L
Sbjct: 102 FSTL 105
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
+K E+ F+ FD + DGF+ EL +++ L + E +++ + D+ G L+++D+
Sbjct: 21 QKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDD 80
Query: 112 FCMLY-EGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLV 170
F ++ E ++ D ++ G IS++ L V
Sbjct: 81 FYIVMGEKILKRDPLDE-------------------IKRAFQLFDDDHTGKISIKNLRRV 121
Query: 171 LSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
LG E E + MI + D+DGDG +N +EF
Sbjct: 122 AKELG--ETLTDEELRAMIEEFDLDGDGEINENEF 154
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
E+KR F FD D G I+ L + L +TD E M+ + D +GDG I +EF
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIA 156
Query: 115 L 115
+
Sbjct: 157 I 157
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEE---MVAKVDANGDGLIEFDE 111
++K+VF DKD GFI + EL L+ D+ A+E ++A D +GDG I DE
Sbjct: 43 DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDE 102
Query: 112 FCML 115
F L
Sbjct: 103 FSTL 106
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEE---MVAKVDANGDGLIEFDE 111
++K+VF DKD GFI + EL L+ D+ A+E ++A D +GDG I +E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 112 FCML 115
F L
Sbjct: 102 FSTL 105
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEE---MVAKVDANGDGLIEFDE 111
++K+VF DKD GFI + EL L+ D+ A+E ++A D +GDG I +E
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 112 FCML 115
F L
Sbjct: 66 FSTL 69
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
AE K F FD DG G I+ L +R L T E + ++ +VD +G G I+F+EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 79
Query: 114 ML 115
++
Sbjct: 80 VM 81
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G IS + LG V+ LG N E +I +VD DG G ++F+EF MM
Sbjct: 35 GDISTKALGTVMRMLGQNPTK--EELDAIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ E+ + F FD D G IT +L + L +T+ E +EM+A+ D N D I+ DEF
Sbjct: 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEF 67
Query: 113 CML 115
+
Sbjct: 68 IRI 70
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G I++++L V LG N E ++MI + D + D ++ DEF R+MK
Sbjct: 24 GTITIKDLRRVAKELGENLTE--EELQEMIAEADRNDDNEIDEDEFIRIMK 72
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G IS +ELG V LG N E ++ I +VD DG G V+FDEF
Sbjct: 34 GCISTKELGKVXRXLGQN--PTPEELQEXIDEVDEDGSGTVDFDEF 77
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 68 DGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
DG I+ EL + R L T E +E + +VD +G G ++FDEF
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
L R F D+DG + E + L L L++ EAE + K D NG G ++ +EF
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 116 YEGMMGGDRQ 125
M R+
Sbjct: 99 LRPPMSQARE 108
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMV-----AKVDANGDGLI 107
+AE + V +D++G G + +L E LR LR ++ +A E V AK+D +GDG++
Sbjct: 72 QAEAEGVCRKWDRNGSGTL---DLEEFLRALRPPMS--QAREAVIAAAFAKLDRSGDGVV 126
Query: 108 EFDEFCMLYEG 118
D+ +Y G
Sbjct: 127 TVDDLRGVYSG 137
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLR---LMVTDMEAEEMVAKVDANGDGLIEFDE 111
++K+VF D+D GFI + EL L+N ++T E + +A D +GDG I +E
Sbjct: 43 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
Query: 112 FCML 115
F L
Sbjct: 103 FQSL 106
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLR---LMVTDMEAEEMVAKVDANGDGLIEFDE 111
++K+VF D+D GFI + EL L+N ++T E + +A D +GDG I +E
Sbjct: 42 QIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 101
Query: 112 FCML 115
F L
Sbjct: 102 FQSL 105
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 12/72 (16%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDM------------EAEEMVAKVD 100
+ +LK F+ +D DG+G+I+K E++E ++ + MV+ + E++ ++D
Sbjct: 98 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMD 157
Query: 101 ANGDGLIEFDEF 112
N DG + +EF
Sbjct: 158 TNRDGKLSLEEF 169
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 92 AEEMVAKVDANGDGLIEFDEFCM 114
AE + DANGDG I+F EF +
Sbjct: 65 AEHVFRTFDANGDGTIDFREFII 87
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLM---VTDMEAEEMVAKVDANGDGLIEFD 110
A++K VF DKD GFI + EL L+ + D E + ++A D++ DG I D
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
Query: 111 EFCML 115
EF +
Sbjct: 101 EFAKM 105
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
+ ++ E K F D+D DGFI+K ++ + +L + T+ E + MVA+ G I
Sbjct: 52 TQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPIN 107
Query: 109 FDEFCMLYEGMMGGDRQE 126
F F ++ + G +E
Sbjct: 108 FTMFLTIFGDRIAGTDEE 125
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G I V+EL + + ALG K E KKMI ++D +G G +NF +F
Sbjct: 46 GTIDVKELKVAMRALGFEP--KKEEIKKMISEIDKEGTGKMNFGDF 89
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
+K E++ F FD DG G I EL ++R L E ++M++++D G G + F +
Sbjct: 29 QKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGD 88
Query: 112 F 112
F
Sbjct: 89 F 89
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
ELK F DK+ G I L L++L +T+ E E M+A+ D +G G ++++EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 115 LYEGMMGGD 123
L MM D
Sbjct: 68 L---MMSSD 73
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 160 GLISVEELGLVLSALG--LNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G+I V+ L +L +LG L E ++IEN MI + D DG G V+++EF+ +M
Sbjct: 22 GVIKVDVLRWILKSLGDELTE-DEIEN---MIAETDTDGSGTVDYEEFKCLM 69
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D E +E++ D D G ++++E
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 143
Query: 112 F 112
F
Sbjct: 144 F 144
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D E +E++ D D G ++++E
Sbjct: 85 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 144
Query: 112 F 112
F
Sbjct: 145 F 145
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D E +E++ D D G ++++E
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 143
Query: 112 F 112
F
Sbjct: 144 F 144
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 33 QSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRL---MVTD 89
++FF+K T+ + ++K+ FA +D GFI + EL L+N + +TD
Sbjct: 27 KAFFAKVGLTSKSAD-------DVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTD 79
Query: 90 MEAEEMVAKVDANGDGLIEFDEFCML 115
E + + D++GDG I DE+ L
Sbjct: 80 GETKTFLKAGDSDGDGKIGVDEWTAL 105
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 160 GLISVEELGLVLS-----ALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
G I +EL L L A L +G K ++ D DGDG + DE+ ++KA
Sbjct: 56 GFIEEDELKLFLQNFKADARALTDGE----TKTFLKAGDSDGDGKIGVDEWTALVKA 108
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDM-EAEEMVAKVDANGDGLIEFDEF 112
EL +F T DKDG + E E+L L+ D+ +A + ++D NG G++ FDEF
Sbjct: 134 ELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEF 192
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
LK ++ D DGDG +TK E+ + + + E V K DANGDG I +EF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEF 59
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 14/69 (20%)
Query: 55 ELKRVFATFDKDGDG--------FITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGL 106
ELK +F +DK+GDG + +TE L+ + + +E+ ++D NGDG
Sbjct: 6 ELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTL------DELFEELDKNGDGE 59
Query: 107 IEFDEFCML 115
+ F+EF +L
Sbjct: 60 VSFEEFQVL 68
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRL---MVTDMEAEEMVAKVDANGDGLIEFDE 111
++K+VF D D GFI + EL L++ +TD E + + D +GDG I DE
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102
Query: 112 FCML 115
F L
Sbjct: 103 FETL 106
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENC--KKMIRKVDVDGDGMVNFDEFRRMM 209
G I EEL VL + + G + + K ++ D DGDG + DEF ++
Sbjct: 57 GFIEEEELKFVLKSFAAD-GRDLTDAETKAFLKAADKDGDGKIGIDEFETLV 107
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
LK ++ D DGDG +TK E+ + + + E V K DANGDG I +EF
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEF 129
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 59 VFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEG 118
+F D +GDG ++ E+ + R + + + + +DA+G+G I+ +EF Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 119 MMGGD 123
+ G D
Sbjct: 65 IQGQD 69
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
Query: 52 KKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
+K E+ F+ FD + DGF+ EL + + L + E +++ + D+ G L ++D+
Sbjct: 21 QKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDD 80
Query: 112 FCMLY-EGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLV 170
F ++ E ++ D ++ G IS++ L V
Sbjct: 81 FYIVXGEKILKRDPLDE-------------------IKRAFQLFDDDHTGKISIKNLRRV 121
Query: 171 LSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
LG E E + I + D+DGDG +N +EF
Sbjct: 122 AKELG--ETLTDEELRAXIEEFDLDGDGEINENEF 154
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
E+KR F FD D G I+ L + L +TD E + + D +GDG I +EF
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIA 156
Query: 115 L 115
+
Sbjct: 157 I 157
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
LK ++ D DGDG +TK E+ + + + E V K DANGDG I +EF
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIE----KVAEQVMKADANGDGYITLEEF 129
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 59 VFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEG 118
+F D +GDG ++ E+ + R + + + + +DA+G+G I+ +EF Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 119 MMGGD 123
+ G D
Sbjct: 65 IQGQD 69
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
S +K E+K F FD + G I EL ++R L V E E++ + D G+G I
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 109 FDEF 112
FD+F
Sbjct: 62 FDDF 65
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 36 FSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRL-MVTDMEAEE 94
F+K A E S +K LK ++ D DGDG +TK E+ + V D
Sbjct: 58 FTKFAAAVKEQDLSD-EKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ---- 112
Query: 95 MVAKVDANGDGLIEFDEFC 113
+ K DANGDG I +EF
Sbjct: 113 -IMKADANGDGYITLEEFL 130
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 33 QSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRL---MVTD 89
++FF+K T+ + ++K+ FA +D GFI + EL L+N + +TD
Sbjct: 27 KAFFAKVGLTSKSAD-------DVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTD 79
Query: 90 MEAEEMVAKVDANGDGLIEFDEFCML 115
E + + D++GDG I D++ L
Sbjct: 80 GETKTFLKAGDSDGDGKIGVDDWTAL 105
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 55 ELKRVFATFDKDGDGFITKTEL---VESLRNLRLMVTDMEAEEMVA----KVDANGDGLI 107
+L+ F +D DG+G I + EL ++++R + M AEE K+D NGDG +
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGEL 148
Query: 108 EFDEF 112
+EF
Sbjct: 149 SLEEF 153
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
A L+ VFA D + G + + E LR+ D EA + ++DA+ DG I F EF
Sbjct: 27 ARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDGAITFQEFA 84
Query: 114 MLYEGMM 120
+ G +
Sbjct: 85 RGFLGSL 91
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 40 ATTTGESRTSAYK---KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMV 96
T+TG SA EL F D DG G I+ EL +L + + + E+++
Sbjct: 10 PTSTGVYAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLL 69
Query: 97 AKVDANGDGLIEFDEFCMLYE 117
D N G I FDEF L+
Sbjct: 70 HMYDKNHSGEITFDEFKDLHH 90
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFR 206
G ISV EL LS+ G+ + +K++ D + G + FDEF+
Sbjct: 42 GAISVPELNAALSSAGVP--FSLATTEKLLHMYDKNHSGEITFDEFK 86
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNL-RLMVTDMEAEEMVAKVDANGDGLIEFDEFC 113
E+ R F FD +GDG I E ++ + +TD E EE + + D +G+G+I+ EF
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 114 ML 115
L
Sbjct: 69 DL 70
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 33 QSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTEL---VESLRNLRLMVTD 89
++FF+K T + ++K+ F D+D GFI + EL ++ +TD
Sbjct: 28 KAFFAKVGLTAKSAD-------DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTD 80
Query: 90 MEAEEMVAKVDANGDGLIEFDEFCML 115
E + + D++GDG I DE+ L
Sbjct: 81 AETKAFLKAGDSDGDGAIGVDEWAAL 106
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 71 ITKTELVESL-RNLRLMVTDM----EAEEMVAKVDANGDGLIEFDEFCMLYEGMMG 121
I+K+ E L + L M++D A++++ +DAN DG I FDE+ L G+ G
Sbjct: 32 ISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITG 87
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 71 ITKTELVESL-RNLRLMVTDM----EAEEMVAKVDANGDGLIEFDEFCMLYEGMMG 121
I+K+ E L + L M++D A++++ +DAN DG I FDE+ L G+ G
Sbjct: 31 ISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITG 86
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
K E+ + F FD D G I+ L + L +TD E +EM+ + D +GDG + EF
Sbjct: 20 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
Query: 113 CML 115
+
Sbjct: 80 LRI 82
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G IS + L V LG N + E ++MI + D DGDG V+ EF R+MK
Sbjct: 36 GKISFKNLKRVAKELGENLTD--EELQEMIDEADRDGDGEVSEQEFLRIMK 84
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
S YK+A F+ FD+ G G I KT + + LR T E E+ + + A D + +
Sbjct: 5 SPYKQA-----FSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVD-MEQ 58
Query: 109 FDEFCMLYEGM-MGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEEL 167
F + G M GD +E G+I V EL
Sbjct: 59 FLQVLNRPNGFDMPGDPEE--------------------FVKGFQVFDKDATGMIGVGEL 98
Query: 168 GLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKA 211
VL++LG N E ++++ V V DGMVN+ +F +M+ A
Sbjct: 99 RYVLTSLGEKLSN--EEMDELLKGVPVK-DGMVNYHDFVQMILA 139
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 17/74 (22%)
Query: 56 LKRVFATFDKDGDGFITKTEL---VESLRNLRLMVT-DMEAE---------EMVAK---- 98
LK F +DKD +G I + EL VES+ L+ + ++EAE E+V +
Sbjct: 97 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLL 156
Query: 99 VDANGDGLIEFDEF 112
VD NGDG + +EF
Sbjct: 157 VDENGDGQLSLNEF 170
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
K E+ + F FD D G I+ L + L +TD E +EM+ + D +GDG + EF
Sbjct: 10 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
Query: 113 CML 115
+
Sbjct: 70 LRI 72
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G IS + L V LG N + E ++MI + D DGDG V+ EF R+MK
Sbjct: 26 GKISFKNLKRVAKELGENLTD--EELQEMIDEADRDGDGEVSEQEFLRIMK 74
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D + +E++ D D G +++++
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 143
Query: 112 F 112
F
Sbjct: 144 F 144
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 57 KRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLY 116
KRVF FDK+ DG ++ E E T + + ++D +G+G + DEF
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 117 EGMM 120
E M+
Sbjct: 64 EKML 67
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G +S++E V AL + E+ K ++DVDG+G +N DEF
Sbjct: 16 GKLSLDEFREV--ALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D + +E++ D D G +++++
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 143
Query: 112 F 112
F
Sbjct: 144 F 144
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D + +E++ D D G +++++
Sbjct: 81 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 140
Query: 112 F 112
F
Sbjct: 141 F 141
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 28/151 (18%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRN-LRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
L VF DKD G I+ TEL ++L N + +++ D + F EF
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSAL 174
+++ + D Q G+I EL LS
Sbjct: 87 VWKYIT--DWQN-----------------------VFRTYDRDNSGMIDKNELKQALSGF 121
Query: 175 GLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G ++ + +IRK D G G + FD+F
Sbjct: 122 GYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 150
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D + +E++ D D G +++++
Sbjct: 82 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 141
Query: 112 F 112
F
Sbjct: 142 F 142
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTEL---VESLRNLRLMVTDMEAEEMVAKVDANGDG 105
S ++LK +F D D GFI + EL ++ + ++T E + +A D +GDG
Sbjct: 36 SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDG 95
Query: 106 LIEFDEF 112
I +EF
Sbjct: 96 KIGAEEF 102
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D + +E++ D D G +++++
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 143
Query: 112 F 112
F
Sbjct: 144 F 144
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 60 FATFDKDGDGFITKTEL--VESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
F FD DG+G I+ EL + ++ + D + ++ +VD NGDG I+F EF ++
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLM 192
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 60/154 (38%), Gaps = 19/154 (12%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCML 115
L+ +F D D G ++ E+++ L+ + + +++ +D+N G I + +F
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLA- 117
Query: 116 YEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSALG 175
D+Q G ISVEEL +
Sbjct: 118 ----ATIDKQ--------------TYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDD 159
Query: 176 LNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
+ + ++++VD++GDG ++F EF MM
Sbjct: 160 IENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 53 KAELKRVFATFDKDGDGFITKTEL------VESLRNLRLMVTDMEAEEMVAKVDANGDGL 106
KAEL+ F D +GDG++T EL +++ + L + +++ D N DG
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 107 IEFDEF 112
I +EF
Sbjct: 66 ISKEEF 71
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 54 AELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD--GLIEFDE 111
A+ F TFD++G GFI+ EL L L ++D + +E++ D D G +++++
Sbjct: 81 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 140
Query: 112 F 112
F
Sbjct: 141 F 141
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 28/151 (18%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRN-LRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
L VF DKD G I+ TEL ++L N + +++ D + F EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSAL 174
+++ + D Q G+I EL LS
Sbjct: 69 VWKYIT--DWQN-----------------------VFRTYDRDNSGMIDKNELKQALSGF 103
Query: 175 GLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G ++ + +IRK D G G + FD+F
Sbjct: 104 GYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 132
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMV---------TDMEAEEM---VAKVDANG 103
LK F +D + DG+ITK E++ ++++ M+ D AE + K+D N
Sbjct: 11 LKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQ 70
Query: 104 DGLIEFDEF---CMLYEGMMGG 122
DG++ +EF C E +M
Sbjct: 71 DGVVTIEEFLEACQKDENIMSS 92
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 28/151 (18%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRN-LRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
L VF DKD G I+ TEL ++L N + +++ D + F EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSAL 174
+++ + D Q G+I EL LS
Sbjct: 66 VWKYIT--DWQN-----------------------VFRTYDRDNSGMIDKNELKQALSGF 100
Query: 175 GLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G ++ + +IRK D G G + FD+F
Sbjct: 101 GYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 129
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 28/151 (18%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRN-LRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
L VF DKD G I+ TEL ++L N + +++ D + F EF
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSAL 174
+++ + D Q G+I EL LS
Sbjct: 65 VWKYIT--DWQN-----------------------VFRTYDRDNSGMIDKNELKQALSGF 99
Query: 175 GLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G ++ + +IRK D G G + FD+F
Sbjct: 100 GYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 128
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 15/83 (18%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMV------------TDMEAEEMVAKVD 100
+ +L F +D + DG+ITK E+++ ++ + M+ E K+D
Sbjct: 137 QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMD 196
Query: 101 ANGDGLIEFDEF---CMLYEGMM 120
N DG++ DEF C E +M
Sbjct: 197 KNKDGVVTIDEFIESCQKDENIM 219
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 28/151 (18%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRN-LRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
L VF DKD G I+ TEL ++L N + +++ D + F EF
Sbjct: 9 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 68
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSAL 174
+++ + D Q G+I EL LS
Sbjct: 69 VWKYIT--DWQN-----------------------VFRTYDRDNSGMIDKNELKQALSGA 103
Query: 175 GLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G ++ + +IRK D G G + FD+F
Sbjct: 104 GYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 132
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNL 83
E++ F FDKDG+G+I+ EL + NL
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNL 67
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 91 EAEEMVAKVDANGDGLIEFDEF-CMLYEGMMGGDRQEK 127
E ++M+ +VDA+G+G I+F EF M+ M D +E+
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 39
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 186 KKMIRKVDVDGDGMVNFDEFRRMM 209
+ MI +VD DG+G ++F EF MM
Sbjct: 4 QDMINEVDADGNGTIDFPEFLTMM 27
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLM--VTDMEAEEMV----AKVDANGDGL 106
+ +LK F +D DG+G I K EL++ ++ + + EE + K+D N DG
Sbjct: 92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGE 151
Query: 107 IEFDEF 112
+ +EF
Sbjct: 152 LTLEEF 157
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 24 PTKKFYAWIQSF---FSKTATTTGESRT-------SAYKKAELKRVFATFDKDGDGFITK 73
PT++ + W ++F + T E +T + + +V+ TFD + DGF+
Sbjct: 17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDF 76
Query: 74 TELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLY 116
E + ++ + + + + DA+G+G I+ +E ++
Sbjct: 77 LEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMF 119
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRN------------LRLMVTDMEAEEMVAKVDAN 102
+LK F +D + DG ITK E++ +++ LR E K+D N
Sbjct: 166 KLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRN 225
Query: 103 GDGLIEFDEF---CMLYEGMMGG 122
DG++ DEF C E +M
Sbjct: 226 QDGVVTIDEFLETCQKDENIMNS 248
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 160 GLISVEELGLVLSALGLNEGNK---IENCKKMIRKVDVDGDGMVNFDEFRRM 208
G I +EL L+ G+ G K +E C+ M+ +D D G + F+EF+ +
Sbjct: 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKEL 98
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 36 FSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEM 95
F+ T GE + ++ FA FD++ GFI + L E L + TD E +EM
Sbjct: 58 FTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEM 117
Query: 96 V--AKVDANGD-GLIEF 109
A +D G+ +EF
Sbjct: 118 YREAPIDKKGNFNYVEF 134
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTEL---VESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
++K+ F D+D GFI + EL ++ + +TD E + + D++GDG I +E
Sbjct: 43 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 102
Query: 112 FCML 115
+ L
Sbjct: 103 WVAL 106
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 55 ELKRVFATFDKDGDGFITKTEL---VESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
++K+ F D+D GFI + EL ++ + +TD E + + D++GDG I +E
Sbjct: 42 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 101
Query: 112 FCML 115
+ L
Sbjct: 102 WVAL 105
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 160 GLISVEELGLVLSALGLNEGNK---IENCKKMIRKVDVDGDGMVNFDEFRRM 208
G I +EL L+ G+ G K +E C+ M+ +D D G + F+EF+ +
Sbjct: 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKEL 98
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 53 KAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
K E+ + F FD D G I+ L + L +TD E +E + + D +GDG + EF
Sbjct: 103 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEF 162
Query: 113 CML 115
+
Sbjct: 163 LRI 165
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMMK 210
G IS + L V LG N + E ++ I + D DGDG V+ EF R+ K
Sbjct: 119 GKISFKNLKRVAKELGENLTD--EELQEXIDEADRDGDGEVSEQEFLRIXK 167
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIE 108
+A ++ E K F FDKD D +T EL +R L T + E+V D + G +
Sbjct: 9 TAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSG--K 66
Query: 109 FDEFCML 115
FD+ L
Sbjct: 67 FDQETFL 73
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 160 GLISVEELGLVLSALGLNEGNK---IENCKKMIRKVDVDGDGMVNFDEFRRM 208
G I +EL L+ G+ G K +E C+ M+ +D D G + F+EF+ +
Sbjct: 16 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKEL 67
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 33 QSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTEL---VESLRNLRLMVTD 89
Q FF T+G S+ SA + +K VF D D G++ + EL ++ + +T+
Sbjct: 28 QKFFQ----TSGLSKMSANQ---VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTE 80
Query: 90 MEAEEMVAKVDANGDGLIEFDEF 112
E + ++A D +GDG I +EF
Sbjct: 81 SETKSLMAAADNDGDGKIGAEEF 103
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 33 QSFFSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTEL---VESLRNLRLMVTD 89
Q FF T+G S+ SA +++K +F D D G++ EL ++ ++ +T+
Sbjct: 27 QKFFQ----TSGLSKMSA---SQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTE 79
Query: 90 MEAEEMVAKVDANGDGLIEFDEF 112
E + ++ D +GDG I DEF
Sbjct: 80 SETKSLMDAADNDGDGKIGADEF 102
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 161 LISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
LI+ E L LG+ EG E+ + M+R+ D+DGDG +N EF +M
Sbjct: 56 LITAESLRRNSGILGI-EGMSKEDAQGMVREGDLDGDGALNQTEFCVLM 103
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 28/151 (18%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRN-LRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
L VF DKD G I+ EL ++L N + +++ D + F EF
Sbjct: 28 LWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 87
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSAL 174
+++ + D Q G+I EL LS
Sbjct: 88 VWKYIT--DWQN-----------------------VFRTYDRDNSGMIDKNELKQALSGF 122
Query: 175 GLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
G ++ + +IRK D G G + FD+F
Sbjct: 123 GYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 151
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 87 VTDMEAEEMVAKVDANGDGLIEFDEFCMLYEGM 119
VT+ + E+++ D N DG I+FDEF + EG+
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 34
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 58 RVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
+F FDKD +GFI E + L + + D N DG I FDE
Sbjct: 67 HLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDE 120
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 16/71 (22%)
Query: 55 ELKRVFATF-DKDGDG---------FITKTELVESLRNLRLMVTDMEAEEMVAKVDANGD 104
ELK +F + DK+GDG + +TE L+ + + +E+ ++D NGD
Sbjct: 6 ELKGIFEKYADKEGDGNQLSKEELKLLLQTEFPSLLKGMSTL------DELFEELDKNGD 59
Query: 105 GLIEFDEFCML 115
G + F+EF +L
Sbjct: 60 GEVSFEEFQVL 70
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMV---TDMEAEE---------MVAKVDAN 102
+L+ F +D D DG+IT+ E+++ + + MV ++ EE + A +D N
Sbjct: 100 KLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKN 159
Query: 103 GDGLIEFDEF 112
DG + EF
Sbjct: 160 ADGKLTLQEF 169
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 48 TSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLI 107
T+ K + + F FDK+ G ++ +L L L +TD E +E++ V+ + +G I
Sbjct: 77 TTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEI 136
Query: 108 EFDEFC 113
++ +F
Sbjct: 137 DYKKFI 142
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 23 FPTKKFYAWIQSFFSKTAT---TTGESRT-------SAYKKAELKRVFATFDKDGDGFIT 72
F ++ +W QSF + + T E +T A KA + VF +FD + DG +
Sbjct: 23 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 82
Query: 73 KTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
E V +L T+ + E + D +G+G I +E
Sbjct: 83 FKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 121
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 23 FPTKKFYAWIQSFFSKTAT---TTGESRT-------SAYKKAELKRVFATFDKDGDGFIT 72
F ++ +W QSF + + T E +T A KA + VF +FD + DG +
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 73 KTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
E V +L T+ + E + D +G+G I +E
Sbjct: 82 FKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 23 FPTKKFYAWIQSFFSKTAT---TTGESRT-------SAYKKAELKRVFATFDKDGDGFIT 72
F ++ +W QSF + + T E +T A KA + VF +FD + DG +
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 73 KTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
E V +L T+ + E + D +G+G I +E
Sbjct: 82 FKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 30.4 bits (67), Expect = 0.87, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 174 LGLNE----GNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGGVLL 216
LGL E KI+ +K+ R++DVD G +N E R+ ++ G L
Sbjct: 592 LGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKL 638
Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 177 NEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
++G IE CK M+ +D DG G + EF
Sbjct: 569 SDGFSIETCKIMVDMLDEDGSGKLGLKEF 597
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 30.4 bits (67), Expect = 0.88, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 174 LGLNE----GNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGGVLL 216
LGL E KI+ +K+ R++DVD G +N E R+ ++ G L
Sbjct: 592 LGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKL 638
Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 177 NEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
++G IE CK M+ +D DG G + EF
Sbjct: 569 SDGFSIETCKIMVDMLDEDGSGKLGLKEF 597
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 23 FPTKKFYAWIQSFFSKTAT---TTGESRT-------SAYKKAELKRVFATFDKDGDGFIT 72
F ++ +W QSF + + T E +T A KA + VF +FD + DG +
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 73 KTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
E V +L T+ + E + D +G+G I +E
Sbjct: 82 FKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 30.0 bits (66), Expect = 0.93, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 174 LGLNE----GNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGGVLL 216
LGL E KI+ +K+ R++DVD G +N E R+ ++ G L
Sbjct: 592 LGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKL 638
Score = 28.9 bits (63), Expect = 2.1, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 177 NEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
++G IE CK M+ +D DG G + EF
Sbjct: 569 SDGFSIETCKIMVDMLDEDGSGKLGLKEF 597
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 174 LGLNE----GNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGG 213
LGL E KI+ +K+ R++DVD G +N E R+ ++ G
Sbjct: 591 LGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAG 634
Score = 29.3 bits (64), Expect = 1.6, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 177 NEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
++G IE CK M+ +D DG G + EF
Sbjct: 568 SDGFSIETCKIMVDMLDSDGSGKLGLKEF 596
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 49 SAYK-KAELKRVFATFD-KDGD-GFITKTELVESLRN--LRLMVTDMEAEEMVAKVDANG 103
SA K AELK +F + K+GD ++K EL + ++ L+ +++ ++D NG
Sbjct: 1 SAQKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNG 60
Query: 104 DGLIEFDEFCML 115
DG + F+EF +L
Sbjct: 61 DGEVSFEEFQVL 72
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 36 FSKTATTTGESRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNL 83
F+ T GE + + L+ F+ FD+DG GFI + L + L N+
Sbjct: 67 FTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENM 114
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 47 RTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGL 106
+ S + ELK F D+D DGFI +L + +L + D E M+ + G
Sbjct: 9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQ 64
Query: 107 IEFDEFCMLY-EGMMGGDRQE 126
+ F F L+ E + G D ++
Sbjct: 65 LNFTAFLTLFGEKVSGTDPED 85
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 23 FPTKKFYAWIQSFFSKTAT---TTGESRT-------SAYKKAELKRVFATFDKDGDGFIT 72
F ++ +W QSF + + T E +T A KA + VF +FD + DG +
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 73 KTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
+ V +L T+ + E + D +G+G I +E
Sbjct: 82 FKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 58 RVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+ F FDK+ G ++ +L L L +TD E +E++ V+ + +G I++ +F
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 59 VFATFD-KDGDGF-ITKTELVESLRN-LRLMVTDMEAEEMVAKV----DANGDGLIEFDE 111
VF + ++GD + K+EL E + N L + +++ +E+V KV D+NGDG +F E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQE 73
Query: 112 F 112
F
Sbjct: 74 F 74
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 23 FPTKKFYAWIQSFFSKTAT---TTGESRT-------SAYKKAELKRVFATFDKDGDGFIT 72
F ++ +W QSF + + T E +T A KA + VF +FD + DG +
Sbjct: 22 FTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD 81
Query: 73 KTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDE 111
+ V +L T+ + E + D +G+G I +E
Sbjct: 82 FKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
+K + DK+ DG I E L L + + EA E +VD NG+G + DE
Sbjct: 104 VKGIVGMCDKNADGQINADEFAAWLTALGM--SKAEAAEAFNQVDTNGNGELSLDEL 158
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMV------------TDMEAEEMVAKVDAN 102
+L+ F +D + DG+I K E+++ ++ + M+ + K+D N
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 149
Query: 103 GDGLIEFDEF 112
DG++ DEF
Sbjct: 150 KDGIVTLDEF 159
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 59 VFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLY 116
+F D +GDG ++ E+ + R + + + + +DA+G+G I+ +EF Y
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNL---------RLMVTDMEAEEM---VAKVDAN 102
+L+ F +D + DG+I K E+++ ++ + ++ D + + K+D N
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKN 149
Query: 103 GDGLIEFDEF 112
DG++ DEF
Sbjct: 150 KDGIVTLDEF 159
>pdb|3ZWH|A Chain A, Ca2+-Bound S100a4 C3s, C81s, C86s And F45w Mutant
Complexed With Myosin Iia
pdb|3ZWH|B Chain B, Ca2+-Bound S100a4 C3s, C81s, C86s And F45w Mutant
Complexed With Myosin Iia
Length = 104
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 65 KDGDGF-ITKTELVESL-RNLRLMV---TDMEA-EEMVAKVDANGDGLIEFDEFCML 115
K+GD F + K+EL E L R L + TD A +++++ +D+N D ++F E+C+
Sbjct: 25 KEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 81
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMV------------TDMEAEEMVAKVDAN 102
+L+ F +D + DG+I K E+++ ++ + M+ + K+D N
Sbjct: 93 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 152
Query: 103 GDGLIEFDEFC 113
DG++ DEF
Sbjct: 153 KDGIVTLDEFL 163
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 12/70 (17%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMV------------TDMEAEEMVAKVDAN 102
+L+ F +D + DG+I K E+++ ++ + M+ + K+D N
Sbjct: 126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKN 185
Query: 103 GDGLIEFDEF 112
DG++ DEF
Sbjct: 186 KDGIVTLDEF 195
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEA 92
EL ++FA FD + G++TK+++ L +TD EA
Sbjct: 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEA 122
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+++E A G+ + + E+C++ R D+D G ++ DE R
Sbjct: 124 GAITLDEWKAYTKAAGIIQSS--EDCEETFRVCDIDESGQLDVDEMTRQH 171
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 30/151 (19%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRN-LRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
L VF DKD G I+ TEL ++L N + +++ D + F EF
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 115 LYEGMMGGDRQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISVEELGLVLSAL 174
+++ + D Q G+I EL LS
Sbjct: 66 VWKYIT--DWQN-----------------------VFRTYDRDNSGMIDKNELKQALSGY 100
Query: 175 GLNEGNKIENCKKMIRKVDVDGDGMVNFDEF 205
L++ + +IRK D G G + FD+F
Sbjct: 101 RLSD----QFHDILIRKFDRQGRGQIAFDDF 127
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRMM 209
G I+++E A G+ + + E+C++ R D+D G ++ DE R
Sbjct: 124 GAITLDEWKAYTKAAGIIQSS--EDCEETFRVCDIDESGQLDVDEXTRQH 171
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 59 VFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEG 118
VF FDKDG G IT E R + ++ + E+ D + G ++ DE + G
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTRQHLG 177
Query: 119 MM 120
Sbjct: 178 FW 179
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 160 GLISVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFDEFRRM 208
G IS++E + G+ + + E+C++ R D+D G ++ DE R
Sbjct: 124 GAISLDEWKAYTKSAGIIQSS--EDCEETFRVCDIDESGQLDVDEMTRQ 170
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 56 LKRVFATFDKDGDGFITKTELVESLRNLRLMVTDME 91
LK F DKD DG+I+K+++V + + L D++
Sbjct: 110 LKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDID 145
>pdb|3M0W|A Chain A, Structure Of S100a4 With Pcp
pdb|3M0W|B Chain B, Structure Of S100a4 With Pcp
pdb|3M0W|C Chain C, Structure Of S100a4 With Pcp
pdb|3M0W|D Chain D, Structure Of S100a4 With Pcp
pdb|3M0W|E Chain E, Structure Of S100a4 With Pcp
pdb|3M0W|F Chain F, Structure Of S100a4 With Pcp
pdb|3M0W|G Chain G, Structure Of S100a4 With Pcp
pdb|3M0W|H Chain H, Structure Of S100a4 With Pcp
pdb|3M0W|I Chain I, Structure Of S100a4 With Pcp
pdb|3M0W|J Chain J, Structure Of S100a4 With Pcp
Length = 100
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 65 KDGDGF-ITKTELVESL-RNLRLMV---TDMEA-EEMVAKVDANGDGLIEFDEFCML 115
K+GD F + K+EL E L R L + TD A +++++ +D+N D ++F E+C+
Sbjct: 21 KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 77
>pdb|1M31|A Chain A, Three-Dimensional Solution Structure Of Apo-Mts1
pdb|1M31|B Chain B, Three-Dimensional Solution Structure Of Apo-Mts1
pdb|2Q91|A Chain A, Structure Of The Ca2+-Bound Activated Form Of The S100a4
Metastasis Factor
pdb|2Q91|B Chain B, Structure Of The Ca2+-Bound Activated Form Of The S100a4
Metastasis Factor
pdb|3CGA|A Chain A, Crystal Structure Of Metastasis-Associated Protein S100a4
In The Active, Calcium-Bound Form
pdb|3CGA|B Chain B, Crystal Structure Of Metastasis-Associated Protein S100a4
In The Active, Calcium-Bound Form
pdb|3KO0|A Chain A, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|B Chain B, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|C Chain C, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|D Chain D, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|E Chain E, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|F Chain F, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|G Chain G, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|H Chain H, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|I Chain I, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|J Chain J, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|K Chain K, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|L Chain L, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|M Chain M, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|N Chain N, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|O Chain O, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|P Chain P, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|Q Chain Q, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|R Chain R, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|S Chain S, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|T Chain T, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
Length = 101
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 65 KDGDGF-ITKTELVESL-RNLRLMV---TDMEA-EEMVAKVDANGDGLIEFDEFCML 115
K+GD F + K+EL E L R L + TD A +++++ +D+N D ++F E+C+
Sbjct: 22 KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 78
>pdb|1W0N|A Chain A, Structure Of Uncomplexed Carbohydrate Binding Domain Cbm36
Length = 131
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 70 FITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
F KT V++L N+ D E + + D D ++F EF +
Sbjct: 87 FTGKTPTVQTLSNITHATGDQEIKLALTSDDGTWDAYVDFIEFSL 131
>pdb|3C1V|A Chain A, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|B Chain B, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|C Chain C, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|D Chain D, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|2LNK|A Chain A, Solution Structure Of Ca-Bound S100a4 In Complex With
Non-Muscle Myosin Iia
pdb|2LNK|B Chain B, Solution Structure Of Ca-Bound S100a4 In Complex With
Non-Muscle Myosin Iia
Length = 113
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 65 KDGDGF-ITKTELVESL-RNLRLMV---TDMEA-EEMVAKVDANGDGLIEFDEFCML 115
K+GD F + K+EL E L R L + TD A +++++ +D+N D ++F E+C+
Sbjct: 34 KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 90
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLR 81
EL F FDK+ DG+I EL E LR
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILR 32
>pdb|4ETO|A Chain A, Structure Of S100a4 In Complex With Non-Muscle Myosin-Iia
Peptide
pdb|4ETO|B Chain B, Structure Of S100a4 In Complex With Non-Muscle Myosin-Iia
Peptide
pdb|4HSZ|A Chain A, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|B Chain B, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|C Chain C, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|D Chain D, Structure Of Truncated (delta8c) S100a4
Length = 93
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 65 KDGDGF-ITKTELVESL-RNLRLMV---TDMEA-EEMVAKVDANGDGLIEFDEFCML 115
K+GD F + K+EL E L R L + TD A +++++ +D+N D ++F E+C+
Sbjct: 22 KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVF 78
>pdb|1UX7|A Chain A, Carbohydrate-binding Module Cbm36 In Complex With Calcium
And Xylotriose
Length = 120
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 70 FITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCM 114
F KT V++L N+ D E + + D D ++F EF +
Sbjct: 76 FTGKTPTVQTLSNITHATGDQEIKLALTSDDGTWDAYVDFIEFSL 120
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 59 VFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEFCMLYEG 118
VF FDKDG G I+ E + +D +AE+ D + G ++ DE + G
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHLG 180
Query: 119 MM 120
Sbjct: 181 FW 182
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 55 ELKRVFATFDKDGDGFITKTELVESLRNL 83
E + F +D+DG+G+I + EL L++L
Sbjct: 192 EFNKAFELYDQDGNGYIDENELDALLKDL 220
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 60 FATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVA-KVDANGDGLIEFDEFCMLYEG 118
F FDK+G+G + EL L L +T+ E E ++A D+NG C+ YE
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHEDSNG---------CINYEA 143
Query: 119 MM 120
+
Sbjct: 144 FL 145
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 63 FDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
FDK+G+G + E+ L L +T+ E E++VA + + +G I ++E
Sbjct: 93 FDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEEL 141
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDME 91
S + AE K F FD+ GDG I ++ + +R L T+ E
Sbjct: 2 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAE 44
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 63 FDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVDANGDGLIEFDEF 112
FDK+G+G + E+ L L +T+ E E++VA + + +G I ++E
Sbjct: 95 FDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEEL 143
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 49 SAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDME 91
S + AE K F FD+ GDG I ++ + +R L T+ E
Sbjct: 4 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAE 46
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 187 KMIRKVDVDGDGMVNFDEFRRMMKAGGVLLTAF 219
+M++K+D+D DG ++F EF ++ GG+ +
Sbjct: 60 RMMKKLDLDSDGQLDFQEFLNLI--GGLAIACH 90
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 162 ISVEELGLVLSALGLNE------GNKIENCKKMIRKVDVDGDGMVNFDEFRRMMKAGGVL 215
ISV+EL +L+ + G +E+C+ M+ +D DG+G + EF +
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNY 609
Query: 216 LTAF 219
LT F
Sbjct: 610 LTIF 613
>pdb|1L0X|B Chain B, Tcr Beta Chain Complexed With Streptococcal Superantigen
Spea
pdb|1L0X|D Chain D, Tcr Beta Chain Complexed With Streptococcal Superantigen
Spea
pdb|1L0Y|B Chain B, T Cell Receptor Beta Chain Complexed With Superantigen
Spea Soaked With Zinc
pdb|1L0Y|D Chain D, T Cell Receptor Beta Chain Complexed With Superantigen
Spea Soaked With Zinc
Length = 221
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 163 SVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFD 203
+ E + + +EGN +E KK++ KV +DG ++FD
Sbjct: 92 NAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFD 132
>pdb|1UUP|A Chain A, Crystal Structure Of A Dimeric Form Of Streptococcal
Pyrogenic Exotoxin A (spea1).
pdb|1UUP|B Chain B, Crystal Structure Of A Dimeric Form Of Streptococcal
Pyrogenic Exotoxin A (spea1).
pdb|1UUP|C Chain C, Crystal Structure Of A Dimeric Form Of Streptococcal
Pyrogenic Exotoxin A (spea1).
pdb|1UUP|D Chain D, Crystal Structure Of A Dimeric Form Of Streptococcal
Pyrogenic Exotoxin A (spea1)
Length = 221
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 163 SVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFD 203
+ E + + +EGN +E KK++ KV +DG ++FD
Sbjct: 92 NAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFD 132
>pdb|1B1Z|A Chain A, Streptococcal Pyrogenic Exotoxin A1
pdb|1B1Z|B Chain B, Streptococcal Pyrogenic Exotoxin A1
pdb|1B1Z|C Chain C, Streptococcal Pyrogenic Exotoxin A1
pdb|1B1Z|D Chain D, Streptococcal Pyrogenic Exotoxin A1
Length = 219
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 163 SVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFD 203
+ E + + +EGN +E KK++ KV +DG ++FD
Sbjct: 90 NAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFD 130
>pdb|1FNU|A Chain A, Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNU|B Chain B, Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNU|C Chain C, Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNU|D Chain D, Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNV|A Chain A, Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNV|B Chain B, Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNV|C Chain C, Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNV|D Chain D, Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNW|A Chain A, Crystal Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNW|B Chain B, Crystal Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNW|C Chain C, Crystal Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNW|D Chain D, Crystal Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNW|E Chain E, Crystal Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNW|F Chain F, Crystal Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNW|G Chain G, Crystal Structure Of Streptococcal Pyrogenic Exotoxin A
pdb|1FNW|H Chain H, Crystal Structure Of Streptococcal Pyrogenic Exotoxin A
Length = 221
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 163 SVEELGLVLSALGLNEGNKIENCKKMIRKVDVDGDGMVNFD 203
+ E + + +EGN +E KK++ KV +DG ++FD
Sbjct: 92 NAERSACIYGGVTNHEGNHLEIPKKIVVKVSIDGIQSLSFD 132
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 12/67 (17%)
Query: 59 VFATFDKDGDGFITKTELVESLRNLRLMVTDM--------EAEEMVAKV----DANGDGL 106
F +D D +G I+ E++ + + MV M E+ V K+ D N DG
Sbjct: 104 AFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQ 163
Query: 107 IEFDEFC 113
+ +EFC
Sbjct: 164 LTLEEFC 170
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase
Length = 91
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 59 VFATFD-KDGDGF-ITKTELVESLRN-LRLMVTDMEAEEMVAKV----DANGDGLIEFDE 111
VF + ++GD + K+EL E + N L + +++ +E+V KV D++GDG +F E
Sbjct: 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 72
Query: 112 F 112
F
Sbjct: 73 F 73
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 65 KDGDGF-ITKTELVESLRN-LRLMVTDMEAEEMVAKV----DANGDGLIEFDEF 112
++GD + K+EL E + N L + +++ +E+V KV D++GDG +F EF
Sbjct: 20 REGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEF 73
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 59 VFATFD-KDGDGF-ITKTELVESLRN-LRLMVTDMEAEEMVAKV----DANGDGLIEFDE 111
VF + ++GD + K+EL E + N L + +++ +E+V KV D++GDG +F E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 112 F 112
F
Sbjct: 74 F 74
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 179 GNKIENCKKMIRKVDVDGDGMVNFDEF 205
G K+E+ + +++D +G G V FDEF
Sbjct: 163 GAKVEDPAALFKELDKNGTGSVTFDEF 189
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 59 VFATFD-KDGDGF-ITKTELVESLRN-LRLMVTDMEAEEMVAKV----DANGDGLIEFDE 111
VF + ++GD + K+EL E + N L + +++ +E+V KV D++GDG +F E
Sbjct: 14 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQE 73
Query: 112 F 112
F
Sbjct: 74 F 74
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To Sbi4211
Length = 89
Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 65 KDGDGF-ITKTELVESLRN-LRLMVTDMEAEEMVAKV----DANGDGLIEFDEF 112
++GD + K+EL E + N L + +++ +E+V KV D++GDG +F EF
Sbjct: 21 REGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEF 74
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 46 SRTSAYKKAELKRVFATFDKDGDGFITKTELVESLRNLRLMVTDMEAEEMVAKVD--ANG 103
S+ + E F TFD++G G I+ E+ L+ L +T+ + ++ D +
Sbjct: 77 SKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDI 136
Query: 104 DGLIEFDEF 112
DG I++++
Sbjct: 137 DGNIKYEDL 145
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,076,522
Number of Sequences: 62578
Number of extensions: 167040
Number of successful extensions: 1696
Number of sequences better than 100.0: 342
Number of HSP's better than 100.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 1003
length of query: 219
length of database: 14,973,337
effective HSP length: 95
effective length of query: 124
effective length of database: 9,028,427
effective search space: 1119524948
effective search space used: 1119524948
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)