Query 027737
Match_columns 219
No_of_seqs 115 out of 1196
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 14:24:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027737.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027737hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0868 Glutathione S-transfer 100.0 1.8E-40 3.9E-45 240.9 17.7 207 3-218 7-214 (217)
2 TIGR01262 maiA maleylacetoacet 100.0 8.1E-38 1.8E-42 244.2 20.6 207 3-217 1-210 (210)
3 PRK09481 sspA stringent starva 100.0 4.7E-38 1E-42 245.8 17.4 197 1-217 10-208 (211)
4 PRK13972 GSH-dependent disulfi 100.0 4.5E-37 9.7E-42 240.9 14.6 200 1-213 1-207 (215)
5 PRK15113 glutathione S-transfe 100.0 1.1E-36 2.5E-41 238.5 16.2 202 1-214 5-211 (214)
6 PLN02473 glutathione S-transfe 100.0 3.6E-36 7.7E-41 235.6 18.6 201 2-211 3-211 (214)
7 PRK10542 glutathionine S-trans 100.0 6.2E-35 1.3E-39 226.4 15.7 196 2-213 1-199 (201)
8 PLN02395 glutathione S-transfe 100.0 3.6E-34 7.7E-39 224.4 18.6 201 2-212 3-211 (215)
9 COG0625 Gst Glutathione S-tran 100.0 1.5E-33 3.2E-38 220.4 18.5 194 2-206 1-199 (211)
10 PRK10357 putative glutathione 100.0 1.3E-33 2.8E-38 219.2 18.1 198 2-212 1-201 (202)
11 PRK11752 putative S-transferas 100.0 2E-33 4.3E-38 226.4 19.2 200 1-213 44-260 (264)
12 KOG0406 Glutathione S-transfer 100.0 1.5E-31 3.2E-36 206.0 18.5 194 2-212 10-212 (231)
13 PTZ00057 glutathione s-transfe 100.0 1.5E-31 3.3E-36 208.1 18.1 191 1-214 4-202 (205)
14 KOG0867 Glutathione S-transfer 100.0 3.7E-31 8.1E-36 208.3 15.1 201 1-210 2-208 (226)
15 TIGR00862 O-ClC intracellular 100.0 2.9E-29 6.3E-34 197.5 17.8 182 8-213 17-222 (236)
16 PLN02378 glutathione S-transfe 100.0 1.1E-29 2.4E-34 198.7 14.9 180 6-212 16-200 (213)
17 PRK10387 glutaredoxin 2; Provi 100.0 2.9E-29 6.4E-34 195.8 11.1 185 2-205 1-207 (210)
18 KOG1695 Glutathione S-transfer 100.0 3.2E-28 7E-33 186.3 15.7 198 2-215 4-204 (206)
19 PLN02817 glutathione dehydroge 100.0 6.2E-28 1.4E-32 193.7 16.6 177 7-211 70-251 (265)
20 TIGR02182 GRXB Glutaredoxin, G 99.9 5E-26 1.1E-30 177.5 11.1 183 3-205 1-206 (209)
21 KOG4420 Uncharacterized conser 99.9 6.4E-24 1.4E-28 163.3 13.1 202 2-211 27-287 (325)
22 PLN02907 glutamate-tRNA ligase 99.9 5.8E-22 1.3E-26 177.3 15.6 161 2-211 3-172 (722)
23 KOG1422 Intracellular Cl- chan 99.9 2E-20 4.3E-25 140.2 14.0 183 8-213 19-207 (221)
24 cd03052 GST_N_GDAP1 GST_N fami 99.8 1.2E-19 2.7E-24 117.9 8.2 73 2-74 1-73 (73)
25 cd03048 GST_N_Ure2p_like GST_N 99.8 2.5E-19 5.5E-24 118.9 9.3 77 1-78 1-80 (81)
26 cd03045 GST_N_Delta_Epsilon GS 99.8 4.8E-19 1E-23 115.4 8.4 74 2-75 1-74 (74)
27 cd03041 GST_N_2GST_N GST_N fam 99.8 5.9E-19 1.3E-23 116.0 7.4 75 1-77 1-77 (77)
28 cd03050 GST_N_Theta GST_N fami 99.8 1.2E-18 2.6E-23 114.2 8.9 76 2-77 1-76 (76)
29 cd03053 GST_N_Phi GST_N family 99.8 1.5E-18 3.3E-23 113.6 8.7 75 2-76 2-76 (76)
30 PF13417 GST_N_3: Glutathione 99.8 2.3E-18 4.9E-23 112.6 7.8 74 4-80 1-74 (75)
31 cd03056 GST_N_4 GST_N family, 99.8 3.3E-18 7.1E-23 111.1 8.1 73 2-74 1-73 (73)
32 cd03046 GST_N_GTT1_like GST_N 99.8 6.1E-18 1.3E-22 110.7 9.1 76 2-78 1-76 (76)
33 cd03047 GST_N_2 GST_N family, 99.8 4.3E-18 9.2E-23 110.7 8.1 73 2-74 1-73 (73)
34 cd03057 GST_N_Beta GST_N famil 99.8 6.2E-18 1.4E-22 111.0 8.7 76 2-78 1-77 (77)
35 cd03042 GST_N_Zeta GST_N famil 99.7 6.6E-18 1.4E-22 109.7 8.2 73 2-74 1-73 (73)
36 cd03059 GST_N_SspA GST_N famil 99.7 8.3E-18 1.8E-22 109.2 8.5 73 2-77 1-73 (73)
37 cd03058 GST_N_Tau GST_N family 99.7 8E-18 1.7E-22 109.7 8.4 73 2-77 1-74 (74)
38 cd03051 GST_N_GTT2_like GST_N 99.7 8.2E-18 1.8E-22 109.4 7.7 73 2-74 1-74 (74)
39 PF02798 GST_N: Glutathione S- 99.7 1E-17 2.2E-22 109.7 8.1 74 2-75 1-76 (76)
40 cd03076 GST_N_Pi GST_N family, 99.7 8.8E-18 1.9E-22 109.2 6.8 72 2-76 2-73 (73)
41 cd03044 GST_N_EF1Bgamma GST_N 99.7 1.6E-17 3.4E-22 108.6 8.0 72 3-75 2-74 (75)
42 cd03039 GST_N_Sigma_like GST_N 99.7 1.2E-17 2.6E-22 108.3 6.7 72 2-75 1-72 (72)
43 cd03075 GST_N_Mu GST_N family, 99.7 5.4E-17 1.2E-21 107.8 8.2 75 3-77 2-82 (82)
44 cd03061 GST_N_CLIC GST_N famil 99.7 6.2E-17 1.3E-21 108.5 8.2 69 8-79 20-88 (91)
45 cd03080 GST_N_Metaxin_like GST 99.7 1.2E-16 2.5E-21 104.4 8.1 68 1-78 1-75 (75)
46 cd03060 GST_N_Omega_like GST_N 99.7 1.8E-16 3.8E-21 102.5 7.9 68 3-73 2-70 (71)
47 cd03055 GST_N_Omega GST_N fami 99.7 2.3E-16 5E-21 106.4 7.9 71 1-74 18-89 (89)
48 cd03037 GST_N_GRX2 GST_N famil 99.7 1.8E-16 3.9E-21 102.4 6.8 70 2-75 1-71 (71)
49 cd03038 GST_N_etherase_LigE GS 99.7 3.7E-16 8E-21 104.3 8.0 70 8-78 14-84 (84)
50 KOG3029 Glutathione S-transfer 99.7 6.1E-16 1.3E-20 120.8 10.2 186 2-201 91-354 (370)
51 cd03191 GST_C_Zeta GST_C famil 99.7 8.9E-16 1.9E-20 109.4 10.2 118 88-213 2-121 (121)
52 cd03077 GST_N_Alpha GST_N fami 99.7 4.9E-16 1.1E-20 102.4 8.0 71 2-78 2-77 (79)
53 cd03049 GST_N_3 GST_N family, 99.7 4.5E-16 9.7E-21 101.1 7.3 70 2-74 1-73 (73)
54 PF13409 GST_N_2: Glutathione 99.6 8.2E-16 1.8E-20 99.0 7.3 68 9-76 1-70 (70)
55 cd03178 GST_C_Ure2p_like GST_C 99.6 7.2E-15 1.6E-19 103.3 10.5 110 89-209 1-112 (113)
56 cd03043 GST_N_1 GST_N family, 99.6 4.1E-15 8.8E-20 96.6 7.7 68 6-74 6-73 (73)
57 KOG4244 Failed axon connection 99.6 7.7E-14 1.7E-18 108.5 15.7 173 8-201 59-272 (281)
58 cd03040 GST_N_mPGES2 GST_N fam 99.6 5.8E-15 1.2E-19 96.8 7.5 71 2-77 2-76 (77)
59 COG2999 GrxB Glutaredoxin 2 [P 99.6 1.4E-14 3.1E-19 106.0 9.9 186 2-206 1-208 (215)
60 cd03188 GST_C_Beta GST_C famil 99.6 4.4E-15 9.6E-20 104.4 6.7 111 89-209 2-114 (114)
61 cd00570 GST_N_family Glutathio 99.6 1.4E-14 3E-19 92.5 7.9 71 2-74 1-71 (71)
62 cd03196 GST_C_5 GST_C family, 99.6 9.5E-15 2.1E-19 103.3 7.4 111 86-209 3-115 (115)
63 cd03186 GST_C_SspA GST_N famil 99.6 2.1E-14 4.5E-19 100.1 8.6 104 88-208 2-106 (107)
64 cd03189 GST_C_GTT1_like GST_C 99.5 2.5E-14 5.4E-19 101.5 8.4 110 84-203 2-119 (119)
65 COG0435 ECM4 Predicted glutath 99.5 3.8E-14 8.3E-19 110.6 9.9 192 2-210 52-285 (324)
66 cd03181 GST_C_EFB1gamma GST_C 99.5 6.3E-14 1.4E-18 100.0 8.3 115 89-213 1-118 (123)
67 cd03184 GST_C_Omega GST_C fami 99.5 5.4E-14 1.2E-18 100.7 7.8 108 89-213 2-115 (124)
68 cd03187 GST_C_Phi GST_C family 99.5 6.8E-14 1.5E-18 99.0 8.1 111 89-209 2-118 (118)
69 cd03177 GST_C_Delta_Epsilon GS 99.5 3.2E-14 6.8E-19 101.0 6.1 111 89-211 2-112 (118)
70 cd03054 GST_N_Metaxin GST_N fa 99.5 9E-14 2E-18 89.9 7.3 65 2-76 1-72 (72)
71 cd03182 GST_C_GTT2_like GST_C 99.5 8.7E-14 1.9E-18 98.4 7.8 110 86-205 1-117 (117)
72 cd03180 GST_C_2 GST_C family, 99.5 1.3E-13 2.8E-18 96.3 8.3 107 89-205 2-110 (110)
73 cd03185 GST_C_Tau GST_C family 99.5 1.1E-13 2.4E-18 99.1 8.0 110 88-213 2-117 (126)
74 cd03208 GST_C_Alpha GST_C fami 99.5 1.5E-13 3.3E-18 100.1 8.2 116 89-215 3-119 (137)
75 cd03210 GST_C_Pi GST_C family, 99.5 2.3E-13 4.9E-18 97.8 8.2 113 89-215 3-116 (126)
76 cd03209 GST_C_Mu GST_C family, 99.5 3.2E-13 7E-18 96.3 8.4 111 89-215 2-113 (121)
77 KOG2903 Predicted glutathione 99.5 7.3E-13 1.6E-17 102.7 10.2 192 2-209 38-286 (319)
78 cd03190 GST_C_ECM4_like GST_C 99.4 3.8E-13 8.2E-18 98.6 8.3 109 88-211 3-118 (142)
79 cd03183 GST_C_Theta GST_C fami 99.4 3.9E-13 8.6E-18 96.4 7.2 111 90-209 2-120 (126)
80 cd03195 GST_C_4 GST_C family, 99.4 4.4E-13 9.6E-18 94.6 6.0 111 87-210 1-112 (114)
81 cd03198 GST_C_CLIC GST_C famil 99.4 6.7E-13 1.5E-17 95.5 6.0 84 122-212 23-125 (134)
82 cd03207 GST_C_8 GST_C family, 99.4 6.4E-13 1.4E-17 91.9 4.5 77 124-211 26-102 (103)
83 cd03203 GST_C_Lambda GST_C fam 99.3 6.7E-12 1.5E-16 89.3 8.7 106 86-212 1-112 (120)
84 cd03206 GST_C_7 GST_C family, 99.3 2E-12 4.3E-17 89.0 5.1 99 94-205 2-100 (100)
85 cd03200 GST_C_JTV1 GST_C famil 99.3 3.5E-12 7.6E-17 87.1 5.8 95 70-201 1-95 (96)
86 cd03079 GST_N_Metaxin2 GST_N f 99.3 8.5E-12 1.8E-16 80.4 7.1 60 8-76 15-74 (74)
87 PF00043 GST_C: Glutathione S- 99.3 5.9E-12 1.3E-16 85.6 6.0 71 123-203 23-95 (95)
88 cd03194 GST_C_3 GST_C family, 99.3 8E-12 1.7E-16 88.1 5.5 74 126-210 39-113 (114)
89 cd03179 GST_C_1 GST_C family, 99.3 3.1E-12 6.7E-17 88.5 2.8 102 89-200 2-105 (105)
90 cd03201 GST_C_DHAR GST_C famil 99.2 2.7E-11 5.9E-16 86.3 7.0 78 127-212 29-111 (121)
91 cd03204 GST_C_GDAP1 GST_C fami 99.2 2.8E-11 6E-16 84.5 5.6 75 123-205 24-111 (111)
92 KOG3027 Mitochondrial outer me 99.2 7.6E-10 1.6E-14 83.3 12.8 172 8-201 32-247 (257)
93 PF14497 GST_C_3: Glutathione 99.1 2.1E-11 4.6E-16 83.7 2.2 68 124-201 31-99 (99)
94 PF13410 GST_C_2: Glutathione 99.1 2.5E-10 5.4E-15 73.0 4.8 65 124-198 2-69 (69)
95 cd03192 GST_C_Sigma_like GST_C 99.1 3.5E-10 7.7E-15 78.1 5.9 101 89-199 2-104 (104)
96 cd00299 GST_C_family Glutathio 99.0 1.8E-10 4E-15 78.4 3.0 96 94-199 2-100 (100)
97 KOG3028 Translocase of outer m 98.9 1.1E-07 2.4E-12 76.3 16.3 172 10-201 17-233 (313)
98 cd03202 GST_C_etherase_LigE GS 98.9 2E-09 4.3E-14 77.0 5.5 68 126-202 56-124 (124)
99 TIGR02190 GlrX-dom Glutaredoxi 98.9 4.9E-09 1.1E-13 68.9 6.3 71 1-74 9-79 (79)
100 cd03078 GST_N_Metaxin1_like GS 98.9 1.1E-08 2.3E-13 66.1 7.2 57 10-76 16-72 (73)
101 PRK10638 glutaredoxin 3; Provi 98.9 6.8E-09 1.5E-13 68.9 6.3 72 2-75 4-75 (83)
102 cd03205 GST_C_6 GST_C family, 98.8 1.2E-08 2.6E-13 69.8 5.8 68 120-199 29-98 (98)
103 cd03193 GST_C_Metaxin GST_C fa 98.8 9.9E-09 2.1E-13 68.7 4.9 64 128-200 19-88 (88)
104 TIGR02196 GlrX_YruB Glutaredox 98.8 2.5E-08 5.5E-13 64.0 5.8 71 1-73 1-73 (74)
105 cd03029 GRX_hybridPRX5 Glutare 98.7 4.6E-08 9.9E-13 63.0 6.9 71 1-74 2-72 (72)
106 cd03197 GST_C_mPGES2 GST_C fam 98.7 2.6E-08 5.7E-13 72.5 5.8 65 128-201 79-145 (149)
107 PF14834 GST_C_4: Glutathione 98.6 1.5E-07 3.2E-12 64.8 6.7 113 86-210 1-113 (117)
108 cd03027 GRX_DEP Glutaredoxin ( 98.6 2E-07 4.2E-12 60.2 5.7 68 2-71 3-70 (73)
109 cd03211 GST_C_Metaxin2 GST_C f 98.6 6.5E-08 1.4E-12 69.3 3.7 68 124-200 53-126 (126)
110 cd03212 GST_C_Metaxin1_3 GST_C 98.5 9.9E-08 2.1E-12 69.4 4.1 68 125-201 61-134 (137)
111 cd02976 NrdH NrdH-redoxin (Nrd 98.5 1.9E-07 4.1E-12 59.7 4.9 63 2-66 2-64 (73)
112 PRK10329 glutaredoxin-like pro 98.5 4E-07 8.7E-12 60.0 5.3 61 1-64 2-62 (81)
113 cd02066 GRX_family Glutaredoxi 98.5 4.9E-07 1.1E-11 57.5 5.6 69 2-72 2-70 (72)
114 COG0695 GrxC Glutaredoxin and 98.3 1.7E-06 3.7E-11 56.8 6.0 72 1-72 2-73 (80)
115 TIGR02200 GlrX_actino Glutared 98.3 7.5E-07 1.6E-11 57.7 4.2 64 2-67 2-67 (77)
116 cd03418 GRX_GRXb_1_3_like Glut 98.3 2.2E-06 4.8E-11 55.4 5.8 71 2-74 2-73 (75)
117 TIGR02181 GRX_bact Glutaredoxi 98.2 3.7E-06 8E-11 55.0 5.6 72 2-75 1-72 (79)
118 TIGR02194 GlrX_NrdH Glutaredox 98.1 5.5E-06 1.2E-10 53.2 4.8 57 2-61 1-57 (72)
119 PRK11200 grxA glutaredoxin 1; 98.1 1.5E-05 3.2E-10 52.9 6.3 75 2-78 3-84 (85)
120 PF00462 Glutaredoxin: Glutare 98.0 5.1E-06 1.1E-10 51.3 3.0 60 2-63 1-60 (60)
121 cd03419 GRX_GRXh_1_2_like Glut 98.0 2.3E-05 4.9E-10 51.4 6.1 74 2-75 2-76 (82)
122 TIGR02183 GRXA Glutaredoxin, G 97.9 5.1E-05 1.1E-09 50.5 6.7 75 2-78 2-83 (86)
123 TIGR02189 GlrX-like_plant Glut 97.9 4.5E-05 9.8E-10 52.2 5.8 72 2-73 10-82 (99)
124 PF10568 Tom37: Outer mitochon 97.8 0.00011 2.4E-09 47.1 6.3 55 9-73 13-71 (72)
125 PHA03050 glutaredoxin; Provisi 97.7 0.00012 2.5E-09 50.9 6.0 70 2-71 15-88 (108)
126 TIGR02180 GRX_euk Glutaredoxin 97.6 0.00019 4.1E-09 47.1 5.9 74 2-75 1-77 (84)
127 TIGR00365 monothiol glutaredox 97.5 0.0003 6.4E-09 47.9 6.0 65 8-74 25-89 (97)
128 cd03028 GRX_PICOT_like Glutare 97.5 0.00045 9.7E-09 46.3 6.0 65 8-74 21-85 (90)
129 PF04399 Glutaredoxin2_C: Glut 97.2 0.00069 1.5E-08 48.6 4.6 68 126-205 57-124 (132)
130 cd03199 GST_C_GRX2 GST_C famil 97.0 0.00075 1.6E-08 48.0 3.6 67 127-205 59-125 (128)
131 cd03032 ArsC_Spx Arsenate Redu 97.0 0.00099 2.2E-08 46.8 3.9 33 1-33 1-33 (115)
132 PRK01655 spxA transcriptional 97.0 0.0011 2.4E-08 47.7 3.9 33 1-33 1-33 (131)
133 cd03031 GRX_GRX_like Glutaredo 96.9 0.0035 7.5E-08 46.0 5.9 71 2-74 2-82 (147)
134 PRK12759 bifunctional gluaredo 96.8 0.03 6.6E-07 48.2 12.4 67 2-71 4-79 (410)
135 PRK13344 spxA transcriptional 96.7 0.0023 5E-08 46.1 4.0 33 1-33 1-33 (132)
136 PRK12559 transcriptional regul 96.6 0.0028 6.1E-08 45.6 4.0 33 1-33 1-33 (131)
137 cd02973 TRX_GRX_like Thioredox 96.5 0.011 2.3E-07 36.9 5.6 57 2-64 3-64 (67)
138 PRK10853 putative reductase; P 96.5 0.004 8.7E-08 43.9 3.8 33 1-33 1-33 (118)
139 COG1393 ArsC Arsenate reductas 96.4 0.0049 1.1E-07 43.4 3.8 33 1-33 2-34 (117)
140 PRK10824 glutaredoxin-4; Provi 96.2 0.014 3.1E-07 40.9 5.2 65 8-74 28-92 (115)
141 cd03036 ArsC_like Arsenate Red 96.1 0.0063 1.4E-07 42.4 3.4 32 2-33 1-32 (111)
142 cd02977 ArsC_family Arsenate R 96.1 0.0085 1.8E-07 41.2 3.7 32 2-33 1-32 (105)
143 COG4545 Glutaredoxin-related p 95.6 0.04 8.7E-07 35.0 5.0 64 1-64 3-77 (85)
144 PRK10026 arsenate reductase; P 95.5 0.018 3.9E-07 41.9 3.7 33 1-33 3-35 (141)
145 TIGR01617 arsC_related transcr 95.4 0.02 4.3E-07 40.3 3.6 32 2-33 1-32 (117)
146 PTZ00062 glutaredoxin; Provisi 95.3 0.052 1.1E-06 42.1 5.9 63 8-72 126-188 (204)
147 cd03035 ArsC_Yffb Arsenate Red 95.3 0.024 5.2E-07 39.1 3.6 32 2-33 1-32 (105)
148 cd03033 ArsC_15kD Arsenate Red 95.2 0.027 5.8E-07 39.4 3.6 32 2-33 2-33 (113)
149 KOG1147 Glutamyl-tRNA syntheta 95.1 0.0081 1.8E-07 52.3 1.0 113 58-205 43-158 (712)
150 KOG1752 Glutaredoxin and relat 95.0 0.12 2.6E-06 35.5 6.2 73 3-75 17-90 (104)
151 TIGR01616 nitro_assoc nitrogen 94.6 0.053 1.2E-06 38.7 3.8 32 2-33 3-34 (126)
152 PHA02125 thioredoxin-like prot 94.5 0.13 2.8E-06 32.9 5.2 52 1-58 1-52 (75)
153 cd03030 GRX_SH3BGR Glutaredoxi 94.2 0.2 4.3E-06 33.6 5.7 68 2-71 2-79 (92)
154 TIGR00014 arsC arsenate reduct 93.9 0.082 1.8E-06 37.0 3.5 32 2-33 1-32 (114)
155 cd03034 ArsC_ArsC Arsenate Red 93.9 0.083 1.8E-06 36.8 3.5 32 2-33 1-32 (112)
156 COG0278 Glutaredoxin-related p 93.0 0.35 7.7E-06 32.7 5.3 67 7-75 27-94 (105)
157 TIGR00412 redox_disulf_2 small 93.0 0.77 1.7E-05 29.4 6.8 54 3-64 4-61 (76)
158 TIGR00411 redox_disulf_1 small 92.6 0.52 1.1E-05 30.2 5.8 57 1-61 2-62 (82)
159 cd03026 AhpF_NTD_C TRX-GRX-lik 92.6 0.49 1.1E-05 31.4 5.6 57 2-64 16-77 (89)
160 PF05768 DUF836: Glutaredoxin- 90.1 1.7 3.6E-05 28.2 6.1 54 2-60 2-57 (81)
161 cd01659 TRX_superfamily Thiore 87.7 1.4 3E-05 25.5 4.3 53 2-57 1-58 (69)
162 PF13192 Thioredoxin_3: Thiore 86.6 3.8 8.3E-05 26.0 6.0 56 3-66 4-63 (76)
163 PF03960 ArsC: ArsC family; I 85.3 0.88 1.9E-05 31.4 2.7 29 5-33 1-29 (110)
164 PF11287 DUF3088: Protein of u 82.7 1.8 3.8E-05 30.0 3.2 67 9-78 23-108 (112)
165 PF09635 MetRS-N: MetRS-N bind 78.6 1.4 3.1E-05 31.0 1.7 27 52-78 35-63 (122)
166 cd02947 TRX_family TRX family; 76.2 16 0.00035 22.9 6.3 55 2-62 14-75 (93)
167 PF04908 SH3BGR: SH3-binding, 74.9 7.1 0.00015 26.5 4.3 67 2-70 3-84 (99)
168 cd02949 TRX_NTR TRX domain, no 72.8 13 0.00027 24.6 5.2 58 2-63 17-80 (97)
169 PF11801 Tom37_C: Tom37 C-term 72.4 2.2 4.7E-05 32.1 1.4 39 133-178 113-153 (168)
170 KOG0911 Glutaredoxin-related p 72.2 8 0.00017 30.3 4.5 67 7-75 151-217 (227)
171 cd02989 Phd_like_TxnDC9 Phosdu 71.8 18 0.00038 24.9 5.9 58 3-66 27-91 (113)
172 cd02953 DsbDgamma DsbD gamma f 68.9 8.4 0.00018 25.8 3.7 55 2-57 15-77 (104)
173 KOG1668 Elongation factor 1 be 67.3 6.4 0.00014 31.0 3.0 60 134-207 10-69 (231)
174 TIGR03143 AhpF_homolog putativ 67.2 16 0.00035 32.9 6.0 57 2-64 480-541 (555)
175 PRK15317 alkyl hydroperoxide r 65.9 6.7 0.00014 34.9 3.3 71 2-76 120-197 (517)
176 TIGR03140 AhpF alkyl hydropero 62.1 8.2 0.00018 34.4 3.2 63 2-65 121-183 (515)
177 cd02975 PfPDO_like_N Pyrococcu 61.4 26 0.00056 24.1 5.0 49 5-57 29-80 (113)
178 PF00085 Thioredoxin: Thioredo 59.8 45 0.00098 21.6 8.0 69 2-74 21-101 (103)
179 TIGR01295 PedC_BrcD bacterioci 56.1 67 0.0015 22.4 6.7 63 2-64 27-104 (122)
180 TIGR02187 GlrX_arch Glutaredox 52.9 70 0.0015 24.7 6.7 52 2-57 137-191 (215)
181 PTZ00051 thioredoxin; Provisio 50.0 62 0.0013 21.0 5.3 58 2-63 22-84 (98)
182 TIGR02681 phage_pRha phage reg 48.7 21 0.00045 24.7 2.8 26 53-78 2-28 (108)
183 cd02984 TRX_PICOT TRX domain, 48.4 55 0.0012 21.2 4.8 58 2-63 18-81 (97)
184 PF10022 DUF2264: Uncharacteri 43.8 45 0.00097 28.4 4.6 110 53-178 98-213 (361)
185 COG3019 Predicted metal-bindin 41.4 46 0.001 24.2 3.6 70 2-77 28-104 (149)
186 cd02963 TRX_DnaJ TRX domain, D 40.0 1.2E+02 0.0025 20.6 5.8 57 3-63 29-92 (111)
187 PHA02278 thioredoxin-like prot 37.9 1.3E+02 0.0027 20.4 6.3 61 4-64 20-86 (103)
188 TIGR02187 GlrX_arch Glutaredox 36.6 1.3E+02 0.0028 23.2 5.9 57 2-62 23-89 (215)
189 PF04564 U-box: U-box domain; 33.6 1.2E+02 0.0027 18.9 4.7 27 51-78 14-40 (73)
190 cd02957 Phd_like Phosducin (Ph 33.1 67 0.0014 21.8 3.4 64 3-71 29-97 (113)
191 cd04911 ACT_AKiii-YclM-BS_1 AC 33.0 49 0.0011 21.3 2.4 24 9-32 14-37 (76)
192 PF04134 DUF393: Protein of un 32.6 1.6E+02 0.0034 19.9 5.4 71 4-76 1-77 (114)
193 PHA03075 glutaredoxin-like pro 30.7 81 0.0018 22.1 3.3 67 2-78 5-71 (123)
194 KOG2824 Glutaredoxin-related p 30.6 63 0.0014 26.3 3.2 59 12-72 149-211 (281)
195 COG3646 Uncharacterized phage- 30.2 56 0.0012 24.5 2.7 30 124-155 87-116 (167)
196 cd02951 SoxW SoxW family; SoxW 29.6 1.7E+02 0.0037 20.0 5.1 16 2-17 18-33 (125)
197 PF09413 DUF2007: Domain of un 29.5 43 0.00093 20.4 1.8 31 3-33 2-32 (67)
198 COG3011 Predicted thiol-disulf 29.4 2E+02 0.0044 20.8 5.3 72 2-77 10-87 (137)
199 COG5515 Uncharacterized conser 28.5 35 0.00075 20.9 1.1 21 2-22 3-27 (70)
200 KOG0079 GTP-binding protein H- 28.1 43 0.00094 24.8 1.8 32 187-218 94-126 (198)
201 cd02952 TRP14_like Human TRX-r 27.2 2.2E+02 0.0048 19.9 6.1 59 8-66 38-106 (119)
202 cd02987 Phd_like_Phd Phosducin 24.9 1.4E+02 0.0031 22.3 4.2 63 4-71 89-156 (175)
203 PF07511 DUF1525: Protein of u 24.8 88 0.0019 21.9 2.8 26 50-75 81-107 (114)
204 COG3118 Thioredoxin domain-con 24.0 2.6E+02 0.0056 23.2 5.7 73 2-78 47-131 (304)
205 PRK09381 trxA thioredoxin; Pro 23.6 2.3E+02 0.0049 18.7 6.2 58 3-64 26-89 (109)
206 cd02956 ybbN ybbN protein fami 23.2 2.1E+02 0.0046 18.3 6.5 57 3-63 17-79 (96)
207 cd02962 TMX2 TMX2 family; comp 23.1 3.1E+02 0.0067 20.1 6.0 58 3-64 52-122 (152)
208 cd02997 PDI_a_PDIR PDIa family 22.5 1.4E+02 0.0031 19.3 3.5 58 2-61 21-86 (104)
209 COG3150 Predicted esterase [Ge 22.4 93 0.002 23.6 2.6 32 2-33 3-34 (191)
210 cd03003 PDI_a_ERdj5_N PDIa fam 21.8 2.4E+02 0.0052 18.3 5.5 55 3-61 23-83 (101)
211 cd02948 TRX_NDPK TRX domain, T 21.8 92 0.002 20.6 2.4 56 3-63 22-84 (102)
212 PRK10996 thioredoxin 2; Provis 21.7 3E+02 0.0065 19.5 6.6 59 2-64 56-120 (139)
213 cd02959 ERp19 Endoplasmic reti 20.7 2.9E+02 0.0063 18.9 5.5 60 3-64 24-91 (117)
214 smart00313 PXA Domain associat 20.5 3.3E+02 0.0071 20.3 5.4 39 107-145 15-53 (176)
215 PRK09266 hypothetical protein; 20.1 95 0.0021 24.9 2.6 60 19-78 200-259 (266)
No 1
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-40 Score=240.93 Aligned_cols=207 Identities=54% Similarity=0.919 Sum_probs=195.5
Q ss_pred EEcccCCCchhHHHHHHHHHcCCcceEEEecCCCC-CCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCCC
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKG-EQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPP 81 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~~ 81 (219)
+||.++.|.+++|||++|..+||+|+.+++++.++ ++...+|++.||.++||+|++||.+++||.||++||++.+|++.
T Consensus 7 iLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~pp 86 (217)
T KOG0868|consen 7 ILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPDPP 86 (217)
T ss_pred hhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCCCC
Confidence 69999999999999999999999999999999886 46678999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccc
Q 027737 82 LLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYY 161 (219)
Q Consensus 82 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~ 161 (219)
|+|.++..||.+++....+.+.+.+..+..+..+.+++..... ..++..-+.++|..||..|..+.++|.+||++|+
T Consensus 87 LLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~-~~W~q~~ItkGF~ALEklL~~~aGkycvGDevti-- 163 (217)
T KOG0868|consen 87 LLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYG-DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTI-- 163 (217)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchh-hHHHHHHHHHhHHHHHHHHHHccCCcccCceeeh--
Confidence 9999999999999999999999999998888888877654333 7788888999999999999998899999999999
Q ss_pred cccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCCCCCCC
Q 027737 162 ICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 218 (219)
Q Consensus 162 ~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~~ 218 (219)
||+++.+.++.. .++..++..||.+.+..+.+...|+|+.++++.+|++|.
T Consensus 164 -----ADl~L~pqv~nA-~rf~vdl~PYPti~ri~e~l~elpaFq~ahP~nQPD~P~ 214 (217)
T KOG0868|consen 164 -----ADLCLPPQVYNA-NRFHVDLTPYPTITRINEELAELPAFQAAHPDNQPDTPP 214 (217)
T ss_pred -----hhhccchhhhhh-hhccccCCcCchHHHHHHHHHhCHHHHhcCCCCCCCCCC
Confidence 999999999999 999999999999999999999999999999999999995
No 2
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=8.1e-38 Score=244.19 Aligned_cols=207 Identities=53% Similarity=0.897 Sum_probs=173.9
Q ss_pred EEcccCCCchhHHHHHHHHHcCCcceEEEecCCC-CCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCCC
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK-GEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPP 81 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~-~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~~ 81 (219)
+||++..|++++++|++|+++||+|+.+.+++.. ++...+++.++||.+++|+|+++|.+++||.+|++||++++++..
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~ 80 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPP 80 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCC
Confidence 5899999999999999999999999999998633 355678899999999999999999999999999999999998878
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccc
Q 027737 82 LLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKA--GADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFL 159 (219)
Q Consensus 82 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~ 159 (219)
|.|.++.+++++++|+.++...+.+.....+........ ..+...+...+.+.+.|+.||++|++++++|++|+++|+
T Consensus 81 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ 160 (210)
T TIGR01262 81 LLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTL 160 (210)
T ss_pred CCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCH
Confidence 999999999999999999876665433222222222221 112234556677999999999999875567999999999
Q ss_pred cccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCCCCCC
Q 027737 160 YYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAP 217 (219)
Q Consensus 160 ~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~ 217 (219)
|||++++.+.++ ...+.+++.+|+|.+|+++|.+||++++++.+.+|+||
T Consensus 161 -------ADi~~~~~l~~~-~~~~~~~~~~p~l~~~~~~~~~rp~~~~~~~~~~~~~~ 210 (210)
T TIGR01262 161 -------ADLCLVPQVYNA-ERFGVDLTPYPTLRRIAAALAALPAFQRAHPENQPDTP 210 (210)
T ss_pred -------HHHHHHHHHHHH-HHcCCCcccchHHHHHHHHHhcCHHHHHhCcccCCCCC
Confidence 999999999987 56666678899999999999999999999999998887
No 3
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=4.7e-38 Score=245.80 Aligned_cols=197 Identities=24% Similarity=0.382 Sum_probs=167.2
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCC
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQP 80 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~ 80 (219)
|||||+++.|++|++++++|+++|++|+.+.+++. ++.++++++||.|+||+|+++|.+++||.||++||++++|+.
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~---~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~ 86 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKD---NLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHP 86 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcc---cCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCC
Confidence 79999999999999999999999999999999863 467899999999999999999999999999999999999988
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccc
Q 027737 81 PLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLY 160 (219)
Q Consensus 81 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~ 160 (219)
.|+|.++.+++++++|+.++...+...... .. ...+...+...+++.+.|..+|++|++ ++|++|+++|+
T Consensus 87 ~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~G~~~t~- 156 (211)
T PRK09481 87 PLMPVYPVARGESRLMMHRIEKDWYSLMNK----IV---NGSASEADAARKQLREELLAIAPVFGE--KPYFMSEEFSL- 156 (211)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----Hh---cCCHHHHHHHHHHHHHHHHHHHHHhcc--CCcccCCCccH-
Confidence 899999999999999998876544322211 11 122344566778899999999999987 79999999999
Q ss_pred ccccccceEEehhHHHHHHhhcCCCC--CCChHHHHHHHHHhCChhHHhhCCCCCCCCC
Q 027737 161 YICYLQADLYLAPQLYAAVNRFNLDM--TQFPLLLRLHEAYSKLPAFQNAVPEKQPDAP 217 (219)
Q Consensus 161 ~~~~~~aD~~l~~~l~~~~~~~~~~~--~~~p~l~~~~~~~~~~p~~~~~~~~~~~~~~ 217 (219)
||+++++.+.++ ...+.++ +.+|+|.+|++++.+||++++++....+..+
T Consensus 157 ------AD~~l~~~~~~~-~~~~~~~~~~~~p~l~~w~~~~~~rp~~~~~~~~~~~~~~ 208 (211)
T PRK09481 157 ------VDCYLAPLLWRL-PVLGIELSGPGAKELKGYMTRVFERDSFLASLTEAEREMR 208 (211)
T ss_pred ------HHHHHHHHHHHH-HhcCCCCCCCCChhHHHHHHHHhccHHHHHHcCHHHHHHh
Confidence 999999999877 5556554 5799999999999999999999987665543
No 4
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=4.5e-37 Score=240.94 Aligned_cols=200 Identities=26% Similarity=0.347 Sum_probs=162.4
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEe-----CC--eeeeehHHHHHHH
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVD-----GD--FVVSDSFAILMYL 73 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-----~~--~~l~es~aI~~yl 73 (219)
|||||+.+ +++|++|+++|+++||+|+.+.+++.++++..++++++||.|+||+|++ || .+++||.||++||
T Consensus 1 m~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 1 MIDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred CeEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 89999865 8999999999999999999999998877778899999999999999996 45 4799999999999
Q ss_pred HHhCCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 027737 74 EEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYAT 153 (219)
Q Consensus 74 ~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~ 153 (219)
+++++ .+.|.++.+++++++|+.|....+.+.+..............+...+....++.+.|..||++|.+ ++|++
T Consensus 80 ~~~~~--~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~ 155 (215)
T PRK13972 80 AEKTG--LFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLEN--SPWLG 155 (215)
T ss_pred HHhcC--CCCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhcc--Ccccc
Confidence 99986 367888999999999999988776654321100000011112344555667789999999999987 79999
Q ss_pred cccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 154 GDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 154 G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
|+++|+ |||++++.+... ...+.+++.+|+|.+|++++.+||++++++...+
T Consensus 156 Gd~~t~-------ADi~l~~~~~~~-~~~~~~~~~~P~l~~w~~r~~~rp~~~~~~~~~~ 207 (215)
T PRK13972 156 GENYSI-------ADIACWPWVNAW-TRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQ 207 (215)
T ss_pred CCCCCH-------HHHHHHHHHHHH-hhcCCcchhCHHHHHHHHHHHhCHHHHHHHHHhc
Confidence 999999 999998877554 3345567889999999999999999998876654
No 5
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=1.1e-36 Score=238.48 Aligned_cols=202 Identities=26% Similarity=0.273 Sum_probs=165.1
Q ss_pred CeEEcccC--CCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCC
Q 027737 1 MLKLFSYW--RSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 1 m~~L~~~~--~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~ 78 (219)
||+||+.+ .|++|++++++|+++||+|+.+.+++.++++..++++++||.|+||+|++||.+++||.+|++||+++++
T Consensus 5 ~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~ 84 (214)
T PRK15113 5 AITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFA 84 (214)
T ss_pred eEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcC
Confidence 89999975 6999999999999999999999999988888889999999999999999999999999999999999998
Q ss_pred CCC---CCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecc
Q 027737 79 QPP---LLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGD 155 (219)
Q Consensus 79 ~~~---l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~ 155 (219)
+.. |+|.++.+++++++|+.++...+..................+...+...+++.+.++.+|++|++. ++|++|+
T Consensus 85 ~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~-~~~l~G~ 163 (214)
T PRK15113 85 PPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPG-QPNLFGE 163 (214)
T ss_pred CCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcC-CCEeeCC
Confidence 665 999999999999999999876554322110000011111122334566778899999999999752 5799996
Q ss_pred cccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCCC
Q 027737 156 EVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQP 214 (219)
Q Consensus 156 ~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 214 (219)
+|+ |||++++.+.++ ...+.+.. |+|.+|++|+.+||+|++++++...
T Consensus 164 -~Tl-------ADi~l~~~l~~~-~~~~~~~~--p~l~~~~~r~~~rp~~~~~~~~~~~ 211 (214)
T PRK15113 164 -WCI-------ADTDLALMLNRL-VLHGDEVP--ERLADYATFQWQRASVQRWLALSAK 211 (214)
T ss_pred -ccH-------HHHHHHHHHHHH-HHcCCCCC--HHHHHHHHHHhcCHHHHHHHHHhhh
Confidence 999 999999999887 44555443 9999999999999999999876543
No 6
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=3.6e-36 Score=235.63 Aligned_cols=201 Identities=28% Similarity=0.324 Sum_probs=166.6
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCC-
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQP- 80 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~- 80 (219)
||||+++.|+++++++++|+++|++|+.+.++..++++..+++.++||.|+||+|+++|.+++||.+|++||++++++.
T Consensus 3 ~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~ 82 (214)
T PLN02473 3 VKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQG 82 (214)
T ss_pred eEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcC
Confidence 7999999999999999999999999999999988888888999999999999999999999999999999999999743
Q ss_pred -CCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHH-HHH---HhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecc
Q 027737 81 -PLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVK-YIE---EKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGD 155 (219)
Q Consensus 81 -~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~ 155 (219)
+|+|.++.+++++++|+.++.+.+.+.....+.. .+. .........+....++.+.|+.||+.|++ ++|++|+
T Consensus 83 ~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~Gd 160 (214)
T PLN02473 83 TDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLAT--NRYLGGD 160 (214)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhcc--CCcccCC
Confidence 6899999999999999999887775543222221 111 11112244556778899999999999987 7899999
Q ss_pred cccccccccccceEEehhHHHHHHhhcCC--CCCCChHHHHHHHHHhCChhHHhhCCC
Q 027737 156 EVFLYYICYLQADLYLAPQLYAAVNRFNL--DMTQFPLLLRLHEAYSKLPAFQNAVPE 211 (219)
Q Consensus 156 ~~s~~~~~~~~aD~~l~~~l~~~~~~~~~--~~~~~p~l~~~~~~~~~~p~~~~~~~~ 211 (219)
++|+ ||+++++.+.++...... .++.+|+|.+|++++.+||++++++..
T Consensus 161 ~~t~-------ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~~ 211 (214)
T PLN02473 161 EFTL-------ADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211 (214)
T ss_pred CCCH-------HHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHHH
Confidence 9999 999999998876222222 147899999999999999999998753
No 7
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=6.2e-35 Score=226.44 Aligned_cols=196 Identities=24% Similarity=0.377 Sum_probs=162.8
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCC-CCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHHHhCCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGE-QFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQ 79 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~-~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~~~~~~ 79 (219)
||||++..| ++++++++|+++||+|+.+.+++.+++ ...+++.++||.|+||||+ +||.+++||.+|++||++++++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~ 79 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD 79 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc
Confidence 689998755 799999999999999999999987654 4568899999999999998 6889999999999999999987
Q ss_pred CCCC-CCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccc
Q 027737 80 PPLL-PSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVF 158 (219)
Q Consensus 80 ~~l~-p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s 158 (219)
..+. |.++.+++++++|+.++.+.+.+.+...+ .. ...+...+....++.+.|+.||+.|++ ++|++|+++|
T Consensus 80 ~~l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~s 152 (201)
T PRK10542 80 RQLLAPVGSLSRYHTIEWLNYIATELHKGFTPLF----RP-DTPEEYKPTVRAQLEKKFQYVDEALAD--EQWICGQRFT 152 (201)
T ss_pred cccCCCCCcHHHHHHHHHHHHHHhhhhhhhhhcc----CC-CChHHHHHHHHHHHHHHHHHHHHHhcC--CCeeeCCCCc
Confidence 7766 55788999999999988766654332211 11 111233455677899999999999987 7899999999
Q ss_pred ccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 159 LYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 159 ~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
+ |||++++.+.+. ...+.+++.+|+|.+|++++.++|++++++.++.
T Consensus 153 ~-------ADi~l~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~~k~~~~~~~ 199 (201)
T PRK10542 153 I-------ADAYLFTVLRWA-YAVKLNLEGLEHIAAYMQRVAERPAVAAALKAEG 199 (201)
T ss_pred H-------HhHHHHHHHHHh-hccCCCcccchHHHHHHHHHHcCHHHHHHHHHcc
Confidence 9 999999999888 5666667889999999999999999999987654
No 8
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=3.6e-34 Score=224.42 Aligned_cols=201 Identities=26% Similarity=0.375 Sum_probs=164.2
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCC--
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ-- 79 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~-- 79 (219)
+|||+. .+++++|++++|+++|++|+.+.+++..++.+.+++++.||.|+||+|+++|.+++||.+|++||++++++
T Consensus 3 ~~ly~~-~~~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~ 81 (215)
T PLN02395 3 LKVYGP-AFASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQG 81 (215)
T ss_pred EEEEcC-CcCcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCC
Confidence 689985 55679999999999999999999998777778899999999999999999999999999999999999974
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHH-HHHH---hcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecc
Q 027737 80 PPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVK-YIEE---KAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGD 155 (219)
Q Consensus 80 ~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~ 155 (219)
..|+|.++.+++++++|+.+.+..+.+.+...... .+.. ....++..+...+++.+.++.||++|++ ++|++|+
T Consensus 82 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~ 159 (215)
T PLN02395 82 PDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSK--SKYLAGD 159 (215)
T ss_pred cCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcC--CccccCC
Confidence 35999999999999999999887665443322211 1111 1122344566778899999999999986 6899999
Q ss_pred cccccccccccceEEehhHHHHHHhhcC--CCCCCChHHHHHHHHHhCChhHHhhCCCC
Q 027737 156 EVFLYYICYLQADLYLAPQLYAAVNRFN--LDMTQFPLLLRLHEAYSKLPAFQNAVPEK 212 (219)
Q Consensus 156 ~~s~~~~~~~~aD~~l~~~l~~~~~~~~--~~~~~~p~l~~~~~~~~~~p~~~~~~~~~ 212 (219)
++|+ ||+++++.+.++....+ ..++.+|+|.+|++++.++|++++++...
T Consensus 160 ~~s~-------ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~~~ 211 (215)
T PLN02395 160 FVSL-------ADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLAKY 211 (215)
T ss_pred CcCH-------HHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHHHh
Confidence 9999 99999998877632222 23577999999999999999999998654
No 9
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-33 Score=220.40 Aligned_cols=194 Identities=38% Similarity=0.543 Sum_probs=168.3
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCe-eeeehHHHHHHHHHhCCCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDF-VVSDSFAILMYLEEKYPQP 80 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~-~l~es~aI~~yl~~~~~~~ 80 (219)
||||+++.||+++++++++.++|++|+.+.+++.. +.+.+++.++||.|+||+|++++. +++||.+|++||+++||++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~-~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDA-EQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCccc-ccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 68999999999999999999999999999999987 778999999999999999996654 9999999999999999976
Q ss_pred CCCCCCHH---HHHHHHHHHHHHhccchhhHHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccc
Q 027737 81 PLLPSDLK---RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAG-ADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDE 156 (219)
Q Consensus 81 ~l~p~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~ 156 (219)
+|+|.++. +++....|+.++...+.+.+............. .++..+...+.+...+..+|+.|++ ++|++|++
T Consensus 80 ~l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~ 157 (211)
T COG0625 80 PLLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLAD--GPYLAGDR 157 (211)
T ss_pred CcCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhcc--CCcccCCC
Confidence 69998874 788888999999888877665544433111111 3466778888999999999999998 89999999
Q ss_pred ccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHH
Q 027737 157 VFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQ 206 (219)
Q Consensus 157 ~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 206 (219)
+|+ ||+++++.+.++ ...+...+.+|++.+|++|+.++|+++
T Consensus 158 ~ti-------AD~~~~~~~~~~-~~~~~~~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 158 FTI-------ADIALAPLLWRL-ALLGEELADYPALKAWYERVLARPAFR 199 (211)
T ss_pred CCH-------HHHHHHHHHHHh-hhcCcccccChHHHHHHHHHHcCCchh
Confidence 999 999999999987 777776788999999999999999954
No 10
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=1.3e-33 Score=219.23 Aligned_cols=198 Identities=23% Similarity=0.258 Sum_probs=158.4
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHHHhCCCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQP 80 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~~~~~~~ 80 (219)
||||+++.|+++++||++|+++|++|+.+.++...+ .+++.+.||.|++|+|+ ++|.+++||.+|++||++++++.
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~---~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~ 77 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNA---DNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAP 77 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCC---chhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCC
Confidence 689999999999999999999999999998886543 45667789999999998 78999999999999999999877
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccc
Q 027737 81 PLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLY 160 (219)
Q Consensus 81 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~ 160 (219)
.|+|.++.+++++++|+.++++.+...+..............++..+....++.+.|+.||++|.+ ++ ++|+++|+
T Consensus 78 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~-l~Gd~~t~- 153 (202)
T PRK10357 78 AMLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLVD--GT-LKTDTVNL- 153 (202)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhcc--Cc-ccCCCcCH-
Confidence 899999999999999988876655443321111111111112334456778899999999999986 56 99999999
Q ss_pred ccccccceEEehhHHHHHHhh-cCCC-CCCChHHHHHHHHHhCChhHHhhCCCC
Q 027737 161 YICYLQADLYLAPQLYAAVNR-FNLD-MTQFPLLLRLHEAYSKLPAFQNAVPEK 212 (219)
Q Consensus 161 ~~~~~~aD~~l~~~l~~~~~~-~~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~ 212 (219)
||+++++.+.++... .+.. ...+|+|.+|++++.+||+|+++.+..
T Consensus 154 ------ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~~~ 201 (202)
T PRK10357 154 ------ATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEPPK 201 (202)
T ss_pred ------HHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCCCC
Confidence 999999999877221 2222 367999999999999999999988653
No 11
>PRK11752 putative S-transferase; Provisional
Probab=100.00 E-value=2e-33 Score=226.36 Aligned_cols=200 Identities=26% Similarity=0.354 Sum_probs=159.8
Q ss_pred CeEEcccCCCchhHHHHHHHHHc------CCcceEEEecCCCCCCCChhhhccCCCCCCceEEeC----CeeeeehHHHH
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLK------GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDG----DFVVSDSFAIL 70 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~------gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~----~~~l~es~aI~ 70 (219)
|||||+. .|++|++|+++|+++ |++|+.+.+++.++++..+++.++||.++||+|+++ |.+++||.+|+
T Consensus 44 ~~~Ly~~-~s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl 122 (264)
T PRK11752 44 PLQLYSL-GTPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAIL 122 (264)
T ss_pred CeEEecC-CCCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHH
Confidence 7999985 599999999999997 999999999988877788999999999999999954 37999999999
Q ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHH-hcCCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 027737 71 MYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEE-KAGADERDIWAKTHIGKGFAALEKLLKDYAG 149 (219)
Q Consensus 71 ~yl~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~ 149 (219)
+||+++++ +|+|.++.+++++++|+.+....+ ......+...+.. ....+...+....++.+.|+.||++|++ +
T Consensus 123 ~YL~~~~~--~L~P~~~~era~v~~wl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~--~ 197 (264)
T PRK11752 123 LYLAEKFG--AFLPKDLAARTETLNWLFWQQGSA-PFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAE--H 197 (264)
T ss_pred HHHHHhcC--CcCCCCHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhcc--C
Confidence 99999997 499999999999999999876543 2111111111111 1111234456677889999999999986 7
Q ss_pred CeeecccccccccccccceEEehhHHHHHHhh--c----CCCCCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 150 KYATGDEVFLYYICYLQADLYLAPQLYAAVNR--F----NLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 150 ~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~--~----~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
+|++|+++|+ |||++++.+.++... + ..+++.+|+|.+|++++.+||+++++...+.
T Consensus 198 ~fl~Gd~~Tl-------ADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~~ 260 (264)
T PRK11752 198 EYIAGDEYTI-------ADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVNR 260 (264)
T ss_pred CCCCCCccCH-------HHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhccc
Confidence 8999999999 999999988766221 1 1235789999999999999999999887653
No 12
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-31 Score=205.96 Aligned_cols=194 Identities=26% Similarity=0.429 Sum_probs=164.4
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccC-CCCCCceEEeCCeeeeehHHHHHHHHHhCC-C
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKIN-PIGYVPALVDGDFVVSDSFAILMYLEEKYP-Q 79 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~-p~~~vP~L~~~~~~l~es~aI~~yl~~~~~-~ 79 (219)
++||+++.||+++|++++|+.+||+|+.++.++.. +++.+++.| +.++||||+.+|.+++||..|++||++.++ +
T Consensus 10 vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~~---Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~ 86 (231)
T KOG0406|consen 10 VKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLTN---KSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSG 86 (231)
T ss_pred EEEEEeecChHHHHHHHHHHhcCCceEEEecCCCC---CCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCC
Confidence 58999999999999999999999999999999753 799999999 679999999999999999999999999999 5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccc
Q 027737 80 PPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFL 159 (219)
Q Consensus 80 ~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~ 159 (219)
.+++|+||-+|++.+.|+++++.-+......... ....+..+...+++...|..||+.|.. ++.|+.|+++++
T Consensus 87 ~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~------~~~~e~~~~~~~e~~e~l~~lE~el~k-~k~~fgG~~~G~ 159 (231)
T KOG0406|consen 87 PPILPSDPYERAQARFWAEYIDKKVFFVGRFVVA------AKGGEEQEAAKEELREALKVLEEELGK-GKDFFGGETIGF 159 (231)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHh------hcCchHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCcCH
Confidence 8999999999999999999999765443322211 113355667788899999999999993 489999999999
Q ss_pred cccccccceEEehhHHHHHHh---hcC-CC---CCCChHHHHHHHHHhCChhHHhhCCCC
Q 027737 160 YYICYLQADLYLAPQLYAAVN---RFN-LD---MTQFPLLLRLHEAYSKLPAFQNAVPEK 212 (219)
Q Consensus 160 ~~~~~~~aD~~l~~~l~~~~~---~~~-~~---~~~~p~l~~~~~~~~~~p~~~~~~~~~ 212 (219)
.|+++++.+..... ..+ .. ...+|+|.+|.+||.++|++++++++.
T Consensus 160 -------vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~ 212 (231)
T KOG0406|consen 160 -------VDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDS 212 (231)
T ss_pred -------hhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCH
Confidence 99999977765522 222 12 477999999999999999999998764
No 13
>PTZ00057 glutathione s-transferase; Provisional
Probab=100.00 E-value=1.5e-31 Score=208.13 Aligned_cols=191 Identities=21% Similarity=0.267 Sum_probs=145.0
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhh------h--ccCCCCCCceEEeCCeeeeehHHHHHH
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDF------L--KINPIGYVPALVDGDFVVSDSFAILMY 72 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~------~--~~~p~~~vP~L~~~~~~l~es~aI~~y 72 (219)
+++|||++.+++++++|++|+++|++|+.+.+.. ... .+ . +.||.|+||+|++||.+++||.||++|
T Consensus 4 ~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~----~~~-~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~Y 78 (205)
T PTZ00057 4 EIVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE----NGD-AFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRY 78 (205)
T ss_pred ceEEEecCCCcchHHHHHHHHHcCCCeEEEeccc----cch-HHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHH
Confidence 3799999999999999999999999999987632 211 22 2 479999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 027737 73 LEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYA 152 (219)
Q Consensus 73 l~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl 152 (219)
|+++++ +.+.+..+++.++.....+.+........ ... .++..+...+.+.+.|..||+.|++++++|+
T Consensus 79 La~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l 147 (205)
T PTZ00057 79 LSKKYK---ICGESELNEFYADMIFCGVQDIHYKFNNT---NLF-----KQNETTFLNEELPKWSGYFENILKKNHCNYF 147 (205)
T ss_pred HHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHHhhh---HHH-----HHHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 999997 44555555444443333222211111100 001 1122345667889999999999987556899
Q ss_pred ecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCCC
Q 027737 153 TGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQP 214 (219)
Q Consensus 153 ~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~ 214 (219)
+|+++|+ ||+++++.+.++....+.+++.+|+|.+|++|+.++|++++++.++..
T Consensus 148 ~Gd~~T~-------AD~~l~~~~~~~~~~~~~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~~ 202 (205)
T PTZ00057 148 VGDNLTY-------ADLAVFNLYDDIETKYPNSLKNFPLLKAHNEFISNLPNIKNYISNRKE 202 (205)
T ss_pred eCCcccH-------HHHHHHHHHHHHHHhChhhhccChhHHHHHHHHHhChHHHHHHHhCCC
Confidence 9999999 999999999887334566688999999999999999999999988753
No 14
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3.7e-31 Score=208.27 Aligned_cols=201 Identities=37% Similarity=0.486 Sum_probs=175.3
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCC-C
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP-Q 79 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~-~ 79 (219)
.|+||++..+++++++.+++.++|++|+.+.++...++++.++|+++||.++||+|+|+|..++||.||+.||.++|. .
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~ 81 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGPL 81 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCC
Confidence 378999999999999999999999999999999999999999999999999999999999999999999999999996 3
Q ss_pred CC-CCCCCHHHHHHHHHHHHHHhccchhh--HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccc
Q 027737 80 PP-LLPSDLKRKAINYQAANIVSSSIQPL--QNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDE 156 (219)
Q Consensus 80 ~~-l~p~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~ 156 (219)
.. |+|.+..+++.+++|+.+.++.+.+. .+..+..............+....++.+.++.+|+.|.+ +.|+.|++
T Consensus 82 ~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~--~~yl~g~~ 159 (226)
T KOG0867|consen 82 GGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKT--QVYLAGDQ 159 (226)
T ss_pred CcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHcc--CCcccCCc
Confidence 44 89999999999999999999888775 333333323333335567788889999999999999998 89999999
Q ss_pred ccccccccccceEEehhHHHHHH-hhc-CCCCCCChHHHHHHHHHhCChhHHhhCC
Q 027737 157 VFLYYICYLQADLYLAPQLYAAV-NRF-NLDMTQFPLLLRLHEAYSKLPAFQNAVP 210 (219)
Q Consensus 157 ~s~~~~~~~~aD~~l~~~l~~~~-~~~-~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 210 (219)
+|+ ||+.+.+.+..+. ... .....++|++.+|++++.++|++++..+
T Consensus 160 ~tl-------ADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e~~~ 208 (226)
T KOG0867|consen 160 LTL-------ADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEEANE 208 (226)
T ss_pred ccH-------HHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHHHHH
Confidence 999 9999999999873 222 3457889999999999999999998654
No 15
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.97 E-value=2.9e-29 Score=197.51 Aligned_cols=182 Identities=25% Similarity=0.289 Sum_probs=141.9
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCC---CCCCC
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ---PPLLP 84 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~---~~l~p 84 (219)
..||+|++++++|+++|++|+.+.+++.. ++++|+++||.++||||+++|.+++||.+|++||+++++. +.+.|
T Consensus 17 ~~cp~~~rv~i~L~ekgi~~e~~~vd~~~---~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p 93 (236)
T TIGR00862 17 GNCPFSQRLFMILWLKGVVFNVTTVDLKR---KPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSP 93 (236)
T ss_pred CCCHhHHHHHHHHHHcCCCcEEEEECCCC---CCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCC
Confidence 56999999999999999999999999764 4789999999999999999999999999999999999974 33445
Q ss_pred CCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhc----------------CC
Q 027737 85 SDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKD----------------YA 148 (219)
Q Consensus 85 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~----------------~~ 148 (219)
.++..++... + +...+. .++.. ..+...+...+++.+.|+.||++|.+ .+
T Consensus 94 ~~~~~~~~~~-------~-l~~~~~----~~~~~--~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~ 159 (236)
T TIGR00862 94 KHPESNTAGL-------D-IFAKFS----AYIKN--SNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSR 159 (236)
T ss_pred CCHHHHHHHH-------H-HHHHHH----HHHHc--CCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccC
Confidence 5554433211 0 111111 11111 12333445667799999999999974 14
Q ss_pred CCeeecccccccccccccceEEehhHHHHHHh----hcCCC-CCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 149 GKYATGDEVFLYYICYLQADLYLAPQLYAAVN----RFNLD-MTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 149 ~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~----~~~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
++|+.|+++|+ |||++++.+.++.. ..+.+ .+.+|+|.+|++++.++|+|+++++.++
T Consensus 160 ~~f~~Gd~~tl-------aD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l~~w~~~~~~~~sf~~t~p~~~ 222 (236)
T TIGR00862 160 RKFLDGDELTL-------ADCNLLPKLHIVKVVAKKYRNFDIPAEFTGVWRYLSNAYAREEFTNTCPDDK 222 (236)
T ss_pred CCcccCCccch-------hhHHHHHHHHHHHHHHHHHhCcCccccCchHHHHHHHHhccchHHhhCCChH
Confidence 79999999999 99999999988832 22666 5889999999999999999999988763
No 16
>PLN02378 glutathione S-transferase DHAR1
Probab=99.97 E-value=1.1e-29 Score=198.72 Aligned_cols=180 Identities=29% Similarity=0.366 Sum_probs=139.2
Q ss_pred ccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCCCCCCC
Q 027737 6 SYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPS 85 (219)
Q Consensus 6 ~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~~l~p~ 85 (219)
.+..||+|++|+++|+++|++|+.+.+++.. ++++|+++||.|+||+|+++|.+++||.+|++||++++++..+.
T Consensus 16 ~~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~---~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~-- 90 (213)
T PLN02378 16 HLGDCPFSQRALLTLEEKSLTYKIHLINLSD---KPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLK-- 90 (213)
T ss_pred CCCCCcchHHHHHHHHHcCCCCeEEEeCccc---CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCCC--
Confidence 3567999999999999999999999999754 46789999999999999999999999999999999999865553
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccc
Q 027737 86 DLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYL 165 (219)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~ 165 (219)
++.+++.+...+. ..+.. +.... ...+.....+.+.|+.+|++|+.++++|++|+++|+
T Consensus 91 ~~~~~a~i~~~~~-------~~~~~----~~~~~----~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~------ 149 (213)
T PLN02378 91 TPAEFASVGSNIF-------GTFGT----FLKSK----DSNDGSEHALLVELEALENHLKSHDGPFIAGERVSA------ 149 (213)
T ss_pred CHHHHHHHHHHHH-------HHHHH----HHhcC----ChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCch------
Confidence 4666666554321 11111 11111 111233457788899999999854479999999999
Q ss_pred cceEEehhHHHHHHhh---c-CCC-CCCChHHHHHHHHHhCChhHHhhCCCC
Q 027737 166 QADLYLAPQLYAAVNR---F-NLD-MTQFPLLLRLHEAYSKLPAFQNAVPEK 212 (219)
Q Consensus 166 ~aD~~l~~~l~~~~~~---~-~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~ 212 (219)
||+++++.+.++... + +.+ .+.+|+|.+|++++.+||+++++++.+
T Consensus 150 -ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~~~~ 200 (213)
T PLN02378 150 -VDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEE 200 (213)
T ss_pred -hhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeecccCCh
Confidence 999999998775221 1 222 367999999999999999999998765
No 17
>PRK10387 glutaredoxin 2; Provisional
Probab=99.96 E-value=2.9e-29 Score=195.83 Aligned_cols=185 Identities=20% Similarity=0.195 Sum_probs=138.1
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHHHhCCCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQP 80 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~~~~~~~ 80 (219)
||||++..||+|++++++|+++||+|+.+.++... ... ..+.||.++||+|+ ++|.+++||.+|++||+++|+++
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~--~~~--~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~ 76 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDD--EAT--PIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKP 76 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCc--hhh--HHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCc
Confidence 79999999999999999999999999998886432 211 25789999999995 88999999999999999999865
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHH-------------HHHH----hcCCc----HHHHHHHHHHHHHHHH
Q 027737 81 PLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVK-------------YIEE----KAGAD----ERDIWAKTHIGKGFAA 139 (219)
Q Consensus 81 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~----~~~~~----~~~~~~~~~l~~~l~~ 139 (219)
.+.+ .+++.+++|+.++...+...+...+.. .+.. ..+.. ...+...+++.+.|+.
T Consensus 77 ~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (210)
T PRK10387 77 LLTG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRA 153 (210)
T ss_pred cCCC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHH
Confidence 4432 256788888887765443322111100 0000 00000 0113566789999999
Q ss_pred HHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhH
Q 027737 140 LEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 205 (219)
Q Consensus 140 le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 205 (219)
+|++|+ ++|++|+++|+ ||+++++.+.++ ...+. .+.+|+|.+|++|+.+||++
T Consensus 154 le~~L~---~~~l~G~~~s~-------ADi~l~~~l~~~-~~~~~-~~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 154 LDPLIV---KPNAVNGELST-------DDIHLFPILRNL-TLVKG-IEWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHHhc---CccccCCCCCH-------HHHHHHHHHhcc-eeecC-CCCCHHHHHHHHHHHHHhCC
Confidence 999985 39999999999 999999999988 43322 23469999999999999976
No 18
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=3.2e-28 Score=186.27 Aligned_cols=198 Identities=21% Similarity=0.252 Sum_probs=161.1
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPP 81 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~~ 81 (219)
+||+|+...++++.+|++++.+|++||++.+...+. ....+...|+|++|+|..||..+.||.||++||+++++
T Consensus 4 ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~---w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g--- 77 (206)
T KOG1695|consen 4 YKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDA---WEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG--- 77 (206)
T ss_pred eEEEecCcchhHHHHHHHHHhcCCCcceeeeccccc---hhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC---
Confidence 589999999999999999999999999999986542 34556668999999999999999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCC-cHHHH-HHHHHHHHHHHHHHHHHhcCCCCeeecccccc
Q 027737 82 LLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGA-DERDI-WAKTHIGKGFAALEKLLKDYAGKYATGDEVFL 159 (219)
Q Consensus 82 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~ 159 (219)
+.|.++.+.++++...+.+.+.....+...... ...+. +...+ .......+.+..++..|+.+++.|++||++|+
T Consensus 78 l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~---~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~ 154 (206)
T KOG1695|consen 78 LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTA---PEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTW 154 (206)
T ss_pred cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhh---hhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccH
Confidence 999999999999988888776554433222221 11111 12122 56667788999999999987788999999999
Q ss_pred cccccccceEEehhHHHHHHhhcC-CCCCCChHHHHHHHHHhCChhHHhhCCCCCCC
Q 027737 160 YYICYLQADLYLAPQLYAAVNRFN-LDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPD 215 (219)
Q Consensus 160 ~~~~~~~aD~~l~~~l~~~~~~~~-~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~ 215 (219)
||+.++..+..+...+. ...+.+|+|.++.+++.++|.+++++.++...
T Consensus 155 -------aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r~~t 204 (206)
T KOG1695|consen 155 -------ADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIPNIKKYLESRPVT 204 (206)
T ss_pred -------HHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCchHHHHHhcCCCC
Confidence 99999999998833233 33677899999999999999999999988544
No 19
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.96 E-value=6.2e-28 Score=193.74 Aligned_cols=177 Identities=26% Similarity=0.359 Sum_probs=138.4
Q ss_pred cCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCCCCCCCC
Q 027737 7 YWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSD 86 (219)
Q Consensus 7 ~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~~l~p~~ 86 (219)
...||+|++++++|+++|++|+.+.+++. .++++++++||.++||+|+++|.+++||.+|++||++++++..+. +
T Consensus 70 ~g~cp~s~rV~i~L~ekgi~ye~~~vdl~---~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~--~ 144 (265)
T PLN02817 70 LGDCPFCQRVLLTLEEKHLPYDMKLVDLT---NKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPLA--T 144 (265)
T ss_pred CCCCcHHHHHHHHHHHcCCCCEEEEeCcC---cCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCCC--C
Confidence 34599999999999999999999999874 357889999999999999988899999999999999999976664 5
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccccccc
Q 027737 87 LKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQ 166 (219)
Q Consensus 87 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~ 166 (219)
+.+++.+.+++... + ...+... .. .+....++.+.|..||++|++ +++|++|+++|+
T Consensus 145 ~~era~i~~~l~~~---~--------~~~~~~~--~~--~~~~~~~l~~~l~~LE~~L~~-~g~yl~Gd~~Sl------- 201 (265)
T PLN02817 145 PPEKASVGSKIFST---F--------IGFLKSK--DP--GDGTEQALLDELTSFDDYIKE-NGPFINGEKISA------- 201 (265)
T ss_pred HHHHHHHHHHHHHH---H--------HHHhccC--Cc--chHHHHHHHHHHHHHHHHHhc-CCCeeCCCCCCH-------
Confidence 67777776654211 1 1111111 11 112235677889999999985 269999999999
Q ss_pred ceEEehhHHHHHHhhc----CCC-CCCChHHHHHHHHHhCChhHHhhCCC
Q 027737 167 ADLYLAPQLYAAVNRF----NLD-MTQFPLLLRLHEAYSKLPAFQNAVPE 211 (219)
Q Consensus 167 aD~~l~~~l~~~~~~~----~~~-~~~~p~l~~~~~~~~~~p~~~~~~~~ 211 (219)
|||++++.+.++.... +.+ .+.+|+|.+|++++.++|+|+++++.
T Consensus 202 ADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~ 251 (265)
T PLN02817 202 ADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRAL 251 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCC
Confidence 9999999998763222 222 36799999999999999999999874
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.93 E-value=5e-26 Score=177.54 Aligned_cols=183 Identities=20% Similarity=0.204 Sum_probs=132.2
Q ss_pred EEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHHHhCCCCC
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPP 81 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~~~~~~~~ 81 (219)
|||++..||+|+|||++|+++|++|+.+.+.... . ....+.||.+++|+|+ +||.+++||.+|++||+++|+.+.
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~--~--~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~ 76 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLNDD--E--ETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPL 76 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCCc--c--hhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCcc
Confidence 6899999999999999999999999988765322 2 2337889999999998 899999999999999999998643
Q ss_pred CCCCCHHHHHHHHHHHHHHhccchhhHHHHHH-------------HHHHHh----cCCc----HHHHHHHHHHHHHHHHH
Q 027737 82 LLPSDLKRKAINYQAANIVSSSIQPLQNLAVV-------------KYIEEK----AGAD----ERDIWAKTHIGKGFAAL 140 (219)
Q Consensus 82 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~----~~~~----~~~~~~~~~l~~~l~~l 140 (219)
+.| ..++.+.+|+.++...+...+...+. ..+... .+.. ...+...+.+.+.|+.+
T Consensus 77 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l 153 (209)
T TIGR02182 77 LTG---KVSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEEL 153 (209)
T ss_pred CCC---CChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHH
Confidence 433 24566777776655544322211110 000000 0000 00134567789999999
Q ss_pred HHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCCCCCCh-HHHHHHHHHhCChhH
Q 027737 141 EKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFP-LLLRLHEAYSKLPAF 205 (219)
Q Consensus 141 e~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p-~l~~~~~~~~~~p~~ 205 (219)
|++|.+ ++|+. +++|+ ||+++++.+.++ ...+. . .+| +|.+|++||.+++++
T Consensus 154 e~~L~~--~~~l~-g~~Ti-------ADi~l~~~l~~~-~~~~~-~-~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 154 DKLIDG--PNAVN-GELSE-------DDILVFPLLRNL-TLVAG-I-NWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHhC--ccccC-CCCCH-------HHHHHHHHhcCe-eeecC-C-CCChHHHHHHHHHHHHhCC
Confidence 999987 89985 56999 999999999887 44322 1 256 999999999998875
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.91 E-value=6.4e-24 Score=163.27 Aligned_cols=202 Identities=23% Similarity=0.262 Sum_probs=149.4
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCC-C
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ-P 80 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~-~ 80 (219)
+.||+++.|..++|||+.+.++||+|+...|+++.+++..++|..+||.+.||||+++..++.++.-|+.|+++.+-+ .
T Consensus 27 ~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger 106 (325)
T KOG4420|consen 27 LVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGER 106 (325)
T ss_pred ceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhcccc
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999998854 4
Q ss_pred CCCCCC-HHHHHHHHHH--HHH-------Hh-----ccch-----hh---HHHHHHHHH-------------------H-
Q 027737 81 PLLPSD-LKRKAINYQA--ANI-------VS-----SSIQ-----PL---QNLAVVKYI-------------------E- 117 (219)
Q Consensus 81 ~l~p~~-~~~~a~~~~~--~~~-------~~-----~~~~-----~~---~~~~~~~~~-------------------~- 117 (219)
.|.|.- ..+..++.+. +.+ .. ..+. |. ++..+.+.. .
T Consensus 107 ~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~ak 186 (325)
T KOG4420|consen 107 VLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAK 186 (325)
T ss_pred cccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHH
Confidence 566652 1111121111 111 00 0000 00 000010000 0
Q ss_pred --------HhcCCcHHHHHHHHHHHHHHHHHHHHHhcC--CCCeeecccccccccccccceEEehhHHHHHHhhcCCC--
Q 027737 118 --------EKAGADERDIWAKTHIGKGFAALEKLLKDY--AGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLD-- 185 (219)
Q Consensus 118 --------~~~~~~~~~~~~~~~l~~~l~~le~~L~~~--~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~-- 185 (219)
....+....+.+..++...|+..|..|..+ -..|++|+++|+ ||+.+...|+++ ...|++
T Consensus 187 qkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efsl-------ADVsLg~~LhRL-~~Lg~e~~ 258 (325)
T KOG4420|consen 187 QKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSL-------ADVSLGATLHRL-KFLGLEKK 258 (325)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchH-------HHHHHHHHHHHH-HHcccHHH
Confidence 000011234556677788888888888763 257999999999 999999999999 666654
Q ss_pred -C--CCChHHHHHHHHHhCChhHHhhCCC
Q 027737 186 -M--TQFPLLLRLHEAYSKLPAFQNAVPE 211 (219)
Q Consensus 186 -~--~~~p~l~~~~~~~~~~p~~~~~~~~ 211 (219)
+ -..|||.+|++|+++|++|++++++
T Consensus 259 yw~~gsrpnle~Yf~rvrrR~sf~kvlg~ 287 (325)
T KOG4420|consen 259 YWEDGSRPNLESYFERVRRRFSFRKVLGD 287 (325)
T ss_pred hcccCCCccHHHHHHHHHhhhHHHHhhhh
Confidence 3 4689999999999999999999875
No 22
>PLN02907 glutamate-tRNA ligase
Probab=99.88 E-value=5.8e-22 Score=177.25 Aligned_cols=161 Identities=14% Similarity=0.117 Sum_probs=131.2
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHHHhCCCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQP 80 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~~~~~~~ 80 (219)
++||+.+.+ .+.+++++|++.|++|+.+. .+|.+++|+|+ ++|.+++||.||++||++.+++.
T Consensus 3 ~kLy~~~~S-~~~~v~~~L~~lgv~~e~~~---------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~ 66 (722)
T PLN02907 3 AKLSFPPDS-PPLAVIAAAKVAGVPLTIDP---------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLP 66 (722)
T ss_pred EEEEECCCC-ChHHHHHHHHHcCCCcEEee---------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCc
Confidence 589976655 57889999999999999864 25899999999 68999999999999999999888
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccc
Q 027737 81 PLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLY 160 (219)
Q Consensus 81 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~ 160 (219)
.|+|.++.+++++++|+.++..... ...+...|+.||++|+. ++|++|+++|+
T Consensus 67 ~L~p~d~~erAqV~qWL~~~~~~~~------------------------~~~l~~~L~~LE~~L~~--rtYLvGd~lTL- 119 (722)
T PLN02907 67 GFYGQDAFESSQVDEWLDYAPTFSS------------------------GSEFENACEYVDGYLAS--RTFLVGYSLTI- 119 (722)
T ss_pred CCCCCCHHHHHHHHHHHHHHhhccc------------------------HHHHHHHHHHHHHHhcc--CCeecCCCCCH-
Confidence 8999999999999999998754210 01356678999999987 79999999999
Q ss_pred ccccccceEEehhHHHHHHhh-cCC-CCCCChHHHHHHHHHhCChh------HHhhCCC
Q 027737 161 YICYLQADLYLAPQLYAAVNR-FNL-DMTQFPLLLRLHEAYSKLPA------FQNAVPE 211 (219)
Q Consensus 161 ~~~~~~aD~~l~~~l~~~~~~-~~~-~~~~~p~l~~~~~~~~~~p~------~~~~~~~ 211 (219)
|||++++.+...... ... ....+|+|.+|++++.++|+ ++++...
T Consensus 120 ------ADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs~~~~~~~~a~~~~ 172 (722)
T PLN02907 120 ------ADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYSDILNEVTAAYVGK 172 (722)
T ss_pred ------HHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCCcchhhHHHHHHHh
Confidence 999999988654111 122 24679999999999999999 5555543
No 23
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.85 E-value=2e-20 Score=140.22 Aligned_cols=183 Identities=25% Similarity=0.278 Sum_probs=141.3
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCCCCCCCCH
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDL 87 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~~l~p~~~ 87 (219)
..||+||++.+.|+++|++|....|++.+ ++++|+++.|.+++|+|..|+..++||..|.++|++.++.+.+.--.+
T Consensus 19 Gdcpf~qr~~m~L~~k~~~f~vttVd~~~---kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~ 95 (221)
T KOG1422|consen 19 GDCPFCQRLFMTLELKGVPFKVTTVDLSR---KPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAP 95 (221)
T ss_pred CCChhHHHHHHHHHHcCCCceEEEeecCC---CcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCC
Confidence 35999999999999999999999999754 689999999999999999999999999999999999998654432223
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhc-CCCCeeeccccccccccccc
Q 027737 88 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKD-YAGKYATGDEVFLYYICYLQ 166 (219)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~-~~~~fl~G~~~s~~~~~~~~ 166 (219)
.|.+. ...+.+ ..+..++ . ...+++.+.....+.+.|..||++|+. +.++|+.||++|.
T Consensus 96 ~E~as------ag~diF-~kF~~fi----~--ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~------- 155 (221)
T KOG1422|consen 96 PESAS------AGSDIF-AKFSAFI----K--KSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTL------- 155 (221)
T ss_pred HHHHh------hHHHHH-HHHHHHH----h--CchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeee-------
Confidence 33321 112211 1111111 1 113344555666788889999999998 7799999999999
Q ss_pred ceEEehhHHHHHHhhcC----CC-CCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 167 ADLYLAPQLYAAVNRFN----LD-MTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 167 aD~~l~~~l~~~~~~~~----~~-~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
|||.|.+-|+.+.-..+ .+ .+.++++++|+..+.++.+|.+++++++
T Consensus 156 aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tcp~d~ 207 (221)
T KOG1422|consen 156 ADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTCPADQ 207 (221)
T ss_pred ehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCCchHH
Confidence 99999999998833322 23 3668999999999999999999998764
No 24
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.81 E-value=1.2e-19 Score=117.86 Aligned_cols=73 Identities=38% Similarity=0.606 Sum_probs=69.2
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
++||+++.|++|+++|++|+++|++|+.+.+++..++++.+++.++||.+++|+|++||.+++||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4899999999999999999999999999999988777788899999999999999999999999999999985
No 25
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.81 E-value=2.5e-19 Score=118.88 Aligned_cols=77 Identities=47% Similarity=0.709 Sum_probs=71.3
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeC---CeeeeehHHHHHHHHHhC
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDG---DFVVSDSFAILMYLEEKY 77 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~---~~~l~es~aI~~yl~~~~ 77 (219)
|++||+++. |+|++++++|+++|++|+.+.+++.+++...+++.+.||.+++|+|+++ |..++||.+|++||++++
T Consensus 1 ~~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 1 MITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred CeEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 899999875 9999999999999999999999987666778899999999999999976 899999999999999987
Q ss_pred C
Q 027737 78 P 78 (219)
Q Consensus 78 ~ 78 (219)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 6
No 26
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.79 E-value=4.8e-19 Score=115.40 Aligned_cols=74 Identities=45% Similarity=0.671 Sum_probs=69.9
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
|+||+++.|++|++++++|+++|++|+.+.+++.++++..+++.+.||.+++|+|+++|..++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 68999999999999999999999999999999877777789999999999999999999999999999999974
No 27
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.78 E-value=5.9e-19 Score=115.96 Aligned_cols=75 Identities=28% Similarity=0.278 Sum_probs=67.1
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEe--CCeeeeehHHHHHHHHHhC
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVD--GDFVVSDSFAILMYLEEKY 77 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~--~~~~l~es~aI~~yl~~~~ 77 (219)
|++||+++.||+|++++++|.++||+|+.+.+. .++...+++++.||.+++|+|++ +|..++||.+|++||++++
T Consensus 1 ~~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~--~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 1 PLELYEFEGSPFCRLVREVLTELELDVILYPCP--KGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred CceEecCCCCchHHHHHHHHHHcCCcEEEEECC--CChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 899999999999999999999999999998875 33344678999999999999995 4789999999999999874
No 28
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.78 E-value=1.2e-18 Score=114.16 Aligned_cols=76 Identities=49% Similarity=0.751 Sum_probs=70.9
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKY 77 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~ 77 (219)
++||+++.|+++++++++|+++|++|+.+.++..+++...+++.+.||.+++|+|+++|.+++||.+|++||++++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5899999999999999999999999999999987776667889999999999999999999999999999999874
No 29
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.78 E-value=1.5e-18 Score=113.62 Aligned_cols=75 Identities=48% Similarity=0.725 Sum_probs=70.0
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHh
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEK 76 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~ 76 (219)
|+||+++.|++|+++|++|+++|++|+.+.++...++++.+++.+.||.+++|+|+++|.+++||.+|++||+++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 799999999999999999999999999999998766667789999999999999999999999999999999863
No 30
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.76 E-value=2.3e-18 Score=112.58 Aligned_cols=74 Identities=47% Similarity=0.785 Sum_probs=69.0
Q ss_pred EcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCC
Q 027737 4 LFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQP 80 (219)
Q Consensus 4 L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~ 80 (219)
||++..||+|+|+|++|+++||+|+.+.+++.. ..+++.+.||.+++|+|++||.+++||.+|++||+++++++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~---~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPEE---KRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTTS---TSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCccc---chhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 799999999999999999999999999998553 37899999999999999999999999999999999999853
No 31
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.76 E-value=3.3e-18 Score=111.07 Aligned_cols=73 Identities=41% Similarity=0.666 Sum_probs=68.6
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
|+||+++.|++|++++++|+++|++|+.+.+++..+++..+++.+.||.+++|+|+++|.+++||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 6899999999999999999999999999999987667778999999999999999999999999999999984
No 32
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.76 E-value=6.1e-18 Score=110.73 Aligned_cols=76 Identities=46% Similarity=0.710 Sum_probs=69.5
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~ 78 (219)
|+||+++. +++++++++|+++|++|+.+.++...++.+.+++.+.||.+++|+|+++|..++||.+|++||++++|
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58998875 68999999999999999999999776667789999999999999999999999999999999999874
No 33
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.76 E-value=4.3e-18 Score=110.69 Aligned_cols=73 Identities=40% Similarity=0.513 Sum_probs=67.5
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
|+||+++.|+++++++++|+++|++|+.+.++...++...+++.+.||.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 5899999999999999999999999999998866555667899999999999999999999999999999984
No 34
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.75 E-value=6.2e-18 Score=111.03 Aligned_cols=76 Identities=41% Similarity=0.550 Sum_probs=69.4
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeC-CeeeeehHHHHHHHHHhCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDG-DFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~-~~~l~es~aI~~yl~~~~~ 78 (219)
|+||+++.+ ++++++++|+++|++|+.+.++..+++++.+++.+.||.+++|+|+++ |..++||.+|++||++++|
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 589998865 689999999999999999999988777788999999999999999965 8999999999999999875
No 35
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.75 E-value=6.6e-18 Score=109.65 Aligned_cols=73 Identities=58% Similarity=0.955 Sum_probs=68.7
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
|+||++..|++|+++|++|+++|++|+.+.+++.+++...+++.+.||.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999999987766778899999999999999999999999999999985
No 36
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.75 E-value=8.3e-18 Score=109.22 Aligned_cols=73 Identities=40% Similarity=0.567 Sum_probs=67.5
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKY 77 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~ 77 (219)
|+||+.+.||+|++++++|+++|++|+.+.++.. +..+++++.||.+++|+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD---NPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCC---CCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 6899999999999999999999999999998854 456899999999999999999999999999999999874
No 37
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.75 E-value=8e-18 Score=109.69 Aligned_cols=73 Identities=36% Similarity=0.606 Sum_probs=66.7
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCC-CCCceEEeCCeeeeehHHHHHHHHHhC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPI-GYVPALVDGDFVVSDSFAILMYLEEKY 77 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~es~aI~~yl~~~~ 77 (219)
|+||+++.||+|+++|++|+++|++|+.+.+++. .+.+++.+.||. +++|+|+++|.+++||.+|++||++++
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG---NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc---cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 6899999999999999999999999999988764 456788999996 999999999999999999999999863
No 38
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.74 E-value=8.2e-18 Score=109.37 Aligned_cols=73 Identities=44% Similarity=0.626 Sum_probs=67.6
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~ 74 (219)
|+||+++.|++|+++|++|+++|++|+.+.++...++...+++.+.||.+++|+|+ ++|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 68999999999999999999999999999999876666678899999999999999 68899999999999985
No 39
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.74 E-value=1e-17 Score=109.68 Aligned_cols=74 Identities=50% Similarity=0.745 Sum_probs=66.7
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCC-CCCceEEeC-CeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPI-GYVPALVDG-DFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~L~~~-~~~l~es~aI~~yl~~ 75 (219)
|+|+++..++++.++|++|+++|++|+.+.++...++.+.+++.+.||. +++|+|+++ |.+++||.||++||++
T Consensus 1 ~~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 5777777888999999999999999999999988887777999999999 999999988 9999999999999985
No 40
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.73 E-value=8.8e-18 Score=109.18 Aligned_cols=72 Identities=24% Similarity=0.316 Sum_probs=65.2
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHh
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEK 76 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~ 76 (219)
|+||+++.+++|+++|++|+++|++|+.+.++.. ...+++.+.||.+++|+|+++|.+++||.+|++||+++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~ 73 (73)
T cd03076 2 YTLTYFPVRGRAEAIRLLLADQGISWEEERVTYE---EWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGRK 73 (73)
T ss_pred cEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH---HhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhcC
Confidence 6899999999999999999999999999999752 23457889999999999999999999999999999863
No 41
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.73 E-value=1.6e-17 Score=108.58 Aligned_cols=72 Identities=29% Similarity=0.448 Sum_probs=66.8
Q ss_pred EEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEe-CCeeeeehHHHHHHHHH
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVD-GDFVVSDSFAILMYLEE 75 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~es~aI~~yl~~ 75 (219)
|||+++.|++|++++++|+++|++|+.+.++..++ ++.+++.++||.+++|+|++ +|.+++||.+|++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKE-NKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccc-cCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 79999999999999999999999999999997654 67889999999999999995 68999999999999986
No 42
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.72 E-value=1.2e-17 Score=108.29 Aligned_cols=72 Identities=26% Similarity=0.270 Sum_probs=64.6
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
|+||+++.+++|+++|++|+++|++|+.+.+++..+ ...++.+.||.+++|+|+++|.+++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~--~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEW--PELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHh--hhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 689999999999999999999999999999886532 234588999999999999999999999999999974
No 43
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.71 E-value=5.4e-17 Score=107.79 Aligned_cols=75 Identities=25% Similarity=0.340 Sum_probs=64.3
Q ss_pred EEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCC-Chhhhc-----cCCCCCCceEEeCCeeeeehHHHHHHHHHh
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQF-SPDFLK-----INPIGYVPALVDGDFVVSDSFAILMYLEEK 76 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~-~~~~~~-----~~p~~~vP~L~~~~~~l~es~aI~~yl~~~ 76 (219)
+|||+..+++|+++|++|+++|++|+.+.+++.+++.. .+++.+ .+|.++||+|++||.+++||.||++||+++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~ 81 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARK 81 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhc
Confidence 78999999999999999999999999999998765542 234432 239999999999999999999999999986
Q ss_pred C
Q 027737 77 Y 77 (219)
Q Consensus 77 ~ 77 (219)
+
T Consensus 82 ~ 82 (82)
T cd03075 82 H 82 (82)
T ss_pred C
Confidence 4
No 44
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.71 E-value=6.2e-17 Score=108.48 Aligned_cols=69 Identities=23% Similarity=0.263 Sum_probs=63.9
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCC
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ 79 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~ 79 (219)
..||+|+++|++|+++||+|+.+.+++.. ++++|.++||.+++|+|+++|.+++||.+|++||+++++.
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~~---~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMKR---KPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCCC---CCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 46899999999999999999999998653 5789999999999999999999999999999999999864
No 45
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.69 E-value=1.2e-16 Score=104.43 Aligned_cols=68 Identities=32% Similarity=0.395 Sum_probs=62.1
Q ss_pred CeEEcccC-------CCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHH
Q 027737 1 MLKLFSYW-------RSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYL 73 (219)
Q Consensus 1 m~~L~~~~-------~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl 73 (219)
|++||++. .||+|++++++|+++|++|+.+.++. .+.||.+++|+|+++|..++||.+|++||
T Consensus 1 m~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~----------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL 70 (75)
T cd03080 1 MITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL----------AKRSPKGKLPFIELNGEKIADSELIIDHL 70 (75)
T ss_pred CEEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc----------ccCCCCCCCCEEEECCEEEcCHHHHHHHH
Confidence 89999998 68999999999999999999988763 26789999999999999999999999999
Q ss_pred HHhCC
Q 027737 74 EEKYP 78 (219)
Q Consensus 74 ~~~~~ 78 (219)
+++++
T Consensus 71 ~~~~~ 75 (75)
T cd03080 71 EEKYG 75 (75)
T ss_pred HHHcC
Confidence 99874
No 46
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.68 E-value=1.8e-16 Score=102.47 Aligned_cols=68 Identities=31% Similarity=0.520 Sum_probs=62.6
Q ss_pred EEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEe-CCeeeeehHHHHHHH
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVD-GDFVVSDSFAILMYL 73 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~es~aI~~yl 73 (219)
+||++..||+|++++++|+++|++|+.+.+++.. ..+++.+.||.+++|+|++ ||..++||.+|++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~---~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELREVELKN---KPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCCC---CCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 6999999999999999999999999999998753 4678999999999999996 599999999999997
No 47
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.67 E-value=2.3e-16 Score=106.43 Aligned_cols=71 Identities=34% Similarity=0.431 Sum_probs=64.6
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeC-CeeeeehHHHHHHHH
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDG-DFVVSDSFAILMYLE 74 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~-~~~l~es~aI~~yl~ 74 (219)
|++||+++.||+|++++++|+++|++|+.+.++... ..+++.+.||.+++|+|+++ |..++||.+|++||+
T Consensus 18 ~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~---~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 18 IIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKD---KPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred cEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCC---CcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 689999999999999999999999999999988643 35678899999999999965 899999999999985
No 48
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.67 E-value=1.8e-16 Score=102.40 Aligned_cols=70 Identities=19% Similarity=0.289 Sum_probs=60.8
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeC-CeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDG-DFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~-~~~l~es~aI~~yl~~ 75 (219)
|+||++..||+|+++|++|.++|++|+.+.++... .....+.+|.+++|+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~----~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD----EATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc----hHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 68999999999999999999999999999887432 2344578999999999964 8999999999999974
No 49
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.66 E-value=3.7e-16 Score=104.33 Aligned_cols=70 Identities=39% Similarity=0.518 Sum_probs=61.3
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeC-CeeeeehHHHHHHHHHhCC
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDG-DFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~-~~~l~es~aI~~yl~~~~~ 78 (219)
..|++|+++|++|+++|++|+.+.+++.+.+....++ +.||.+++|+|+++ |..++||.+|++||++++|
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 5699999999999999999999999876544434455 78999999999988 8999999999999999875
No 50
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.66 E-value=6.1e-16 Score=120.79 Aligned_cols=186 Identities=19% Similarity=0.180 Sum_probs=128.1
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH------
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE------ 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~------ 75 (219)
++||.+..||||.+||.+|.+.||+|+.++|++... .+ ++.+...+||.|...|.-+.||..|+.-|+.
T Consensus 91 l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~r----~e-Ik~SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~ 165 (370)
T KOG3029|consen 91 LVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVLR----QE-IKWSSYKKVPILLIRGEQMVDSSVIISLLATYLQDKR 165 (370)
T ss_pred EEEEeeccCchHHHHHHHHhhcCCceEEEEecchhh----hh-ccccccccccEEEeccceechhHHHHHHHHHHhccCC
Confidence 579999999999999999999999999999997642 22 3455688999999656569999999988744
Q ss_pred --------hCCCCCC----------------------CCC-CHHHHHHHHHHHHHHhccchhhHHHHHHH----------
Q 027737 76 --------KYPQPPL----------------------LPS-DLKRKAINYQAANIVSSSIQPLQNLAVVK---------- 114 (219)
Q Consensus 76 --------~~~~~~l----------------------~p~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~---------- 114 (219)
.||--.. .|. +.+.+...+.|..|+++++-.++..-+++
T Consensus 166 q~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFe 245 (370)
T KOG3029|consen 166 QDLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFE 245 (370)
T ss_pred CCHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHH
Confidence 2330000 011 12223456678888877654433222211
Q ss_pred H-----------------------------HHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccc
Q 027737 115 Y-----------------------------IEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYL 165 (219)
Q Consensus 115 ~-----------------------------~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~ 165 (219)
+ +.+...........++.+.+.++.+-..|+. +++|+.|++|++
T Consensus 246 wf~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgk-nr~flGG~kPnL------ 318 (370)
T KOG3029|consen 246 WFSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGK-NRPFLGGKKPNL------ 318 (370)
T ss_pred HHHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCC-CCCccCCCCCch------
Confidence 0 1111112223344667788888888888864 499999999999
Q ss_pred cceEEehhHHHHHHhhcC--CCCCCChHHHHHHHHHhC
Q 027737 166 QADLYLAPQLYAAVNRFN--LDMTQFPLLLRLHEAYSK 201 (219)
Q Consensus 166 ~aD~~l~~~l~~~~~~~~--~~~~~~p~l~~~~~~~~~ 201 (219)
||++++++|..+ .... .+.-....+..|+.+|.+
T Consensus 319 -aDLsvfGvl~sm-~gc~afkd~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 319 -ADLSVFGVLRSM-EGCQAFKDCLQNTSIGEWYYRMEA 354 (370)
T ss_pred -hhhhhhhhhhHh-hhhhHHHHHHhcchHHHHHHHHHH
Confidence 999999999988 3222 233445789999999986
No 51
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.66 E-value=8.9e-16 Score=109.43 Aligned_cols=118 Identities=46% Similarity=0.795 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccc
Q 027737 88 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAG--ADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYL 165 (219)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~ 165 (219)
.+++++++|+.++.+.+.+.+...+......... .+...+.....+.+.|+.+|++|++.+++|++|+++|+
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~------ 75 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTL------ 75 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCH------
Confidence 4689999999999988876533333332222211 12333456677899999999999853257999999999
Q ss_pred cceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 166 QADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 166 ~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
|||++++.+.++ ...+.+++.+|+|.+|++++.++|+|+++.+.++
T Consensus 76 -ADi~~~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 121 (121)
T cd03191 76 -ADICLVPQVYNA-RRFGVDLSPYPTIARINEACLELPAFQAAHPDNQ 121 (121)
T ss_pred -HHHHHHHHHHHH-HHhCCCcccCcHHHHHHHHHHhChhHHHhCcCcC
Confidence 999999999887 5566667889999999999999999999987653
No 52
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.66 E-value=4.9e-16 Score=102.45 Aligned_cols=71 Identities=24% Similarity=0.247 Sum_probs=61.3
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhc-----cCCCCCCceEEeCCeeeeehHHHHHHHHHh
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLK-----INPIGYVPALVDGDFVVSDSFAILMYLEEK 76 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~-----~~p~~~vP~L~~~~~~l~es~aI~~yl~~~ 76 (219)
++||+++.++++++++++|+++|++|+.+.++.. +++.+ .+|.+++|+|++||.+++||.||++||+++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~------~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~ 75 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA------EDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGK 75 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH------HHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHH
Confidence 5899999999999999999999999999988742 22222 236899999999999999999999999998
Q ss_pred CC
Q 027737 77 YP 78 (219)
Q Consensus 77 ~~ 78 (219)
++
T Consensus 76 ~~ 77 (79)
T cd03077 76 YN 77 (79)
T ss_pred cC
Confidence 76
No 53
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.65 E-value=4.5e-16 Score=101.09 Aligned_cols=70 Identities=33% Similarity=0.403 Sum_probs=63.8
Q ss_pred eEEcccCCCchhHHHHHHHHH--cCCcceEEEecCCCCCCCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNL--KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~--~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~ 74 (219)
|+||++..|++|+++|++|++ +|++|+.+.++.. .+.+++.+.||.+++|+|+ ++|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPW---SDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcc---cCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 689999999999999999999 8999999998743 4568899999999999998 68899999999999985
No 54
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.64 E-value=8.2e-16 Score=99.00 Aligned_cols=68 Identities=57% Similarity=0.842 Sum_probs=58.3
Q ss_pred CCchhHHHHHHHHHcCCcceEEEecC-CCCCCCChhhhccCCCCCCceEEe-CCeeeeehHHHHHHHHHh
Q 027737 9 RSSCSHRVRIGLNLKGLEYEYKAVNL-VKGEQFSPDFLKINPIGYVPALVD-GDFVVSDSFAILMYLEEK 76 (219)
Q Consensus 9 ~s~~~~~vr~~l~~~gi~~~~~~v~~-~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~es~aI~~yl~~~ 76 (219)
.||+++|++++|+++|++|+...+.. .++..+.+++.+.||.++||+|++ +|.++.||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 48999999999999999999988854 234456789999999999999995 899999999999999974
No 55
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.61 E-value=7.2e-15 Score=103.34 Aligned_cols=110 Identities=18% Similarity=0.199 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhccchhhHHHHH-HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccc
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAV-VKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQA 167 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~a 167 (219)
+++++++|+.|.+..+.+.+...+ ...+. ....+...+....++.+.|+.+|+.|++ ++|++|+++|+ |
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~-------a 70 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYA-PEKIPYAIERYTNEAKRLYGVLDKRLAG--RDYLAGDEYSI-------A 70 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhC-CCCChHHHHHHHHHHHHHHHHHHHHHcc--CCcccCCCCCe-------e
Confidence 368899999999988877654332 22221 1223455677888999999999999986 79999999999 9
Q ss_pred eEEehhHHHHHHhhcCCC-CCCChHHHHHHHHHhCChhHHhhC
Q 027737 168 DLYLAPQLYAAVNRFNLD-MTQFPLLLRLHEAYSKLPAFQNAV 209 (219)
Q Consensus 168 D~~l~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~~p~~~~~~ 209 (219)
||++++.+.+. ...+.+ .+.+|++.+|++++.++|++++++
T Consensus 71 Di~l~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 71 DIAIFPWVRRL-EWIGIDDLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred eeeHHHHHHHH-HhccccchhhchHHHHHHHHHhhCHHHHHhc
Confidence 99999999888 555554 677999999999999999999875
No 56
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.60 E-value=4.1e-15 Score=96.56 Aligned_cols=68 Identities=38% Similarity=0.450 Sum_probs=61.3
Q ss_pred ccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 6 SYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 6 ~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
....|+++++++++|+++|++|+.+.+++..+ ...+++.+.||.+++|+|+++|.+++||.+|++||+
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTP-DTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCc-cccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 45679999999999999999999999987654 346889999999999999999999999999999984
No 57
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.60 E-value=7.7e-14 Score=108.53 Aligned_cols=173 Identities=19% Similarity=0.162 Sum_probs=122.0
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCCCCCCCCH
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDL 87 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~~l~p~~~ 87 (219)
..||+|.++..+|...+||||.+...+ ...++.|++|.++-||..+++|.-|...|.+.+.-+..+ .+
T Consensus 59 nLSPfClKvEt~lR~~~IpYE~~~~~~----------~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~L--~~ 126 (281)
T KOG4244|consen 59 NLSPFCLKVETFLRAYDIPYEIVDCSL----------KRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDDL--SA 126 (281)
T ss_pred CCChHHHHHHHHHHHhCCCceeccccc----------eeeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCCC--CH
Confidence 359999999999999999999776542 234568999999999999999999999999988633322 34
Q ss_pred HHHHHHHHHHHHHhccchhh------------------------HHHHHHHHH-----HHhcCCc-------HHHHHHHH
Q 027737 88 KRKAINYQAANIVSSSIQPL------------------------QNLAVVKYI-----EEKAGAD-------ERDIWAKT 131 (219)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~------------------------~~~~~~~~~-----~~~~~~~-------~~~~~~~~ 131 (219)
.++++.......+++++.-+ +...+.+++ .++.... -..++..+
T Consensus 127 e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~e 206 (281)
T KOG4244|consen 127 EQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDE 206 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHH
Confidence 55566555544444332110 001111111 1110000 01234666
Q ss_pred HHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCC-----CCCChHHHHHHHHHhC
Q 027737 132 HIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLD-----MTQFPLLLRLHEAYSK 201 (219)
Q Consensus 132 ~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~-----~~~~p~l~~~~~~~~~ 201 (219)
-+.+-|+.+++.|++ ++|+.|+++|- +|+.+++.|..++..+... -.++|+|..|++|+++
T Consensus 207 ll~rDlr~i~~~Lg~--KkflfGdkit~-------~DatvFgqLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 207 LLHRDLRAISDYLGD--KKFLFGDKITP-------ADATVFGQLAQVYYPFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHhCC--CccccCCCCCc-------ceeeehhhhhheeccCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 678889999999998 89999999999 9999999999885433322 2669999999999986
No 58
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.59 E-value=5.8e-15 Score=96.83 Aligned_cols=71 Identities=27% Similarity=0.338 Sum_probs=61.3
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeC----CeeeeehHHHHHHHHHhC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDG----DFVVSDSFAILMYLEEKY 77 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~----~~~l~es~aI~~yl~~~~ 77 (219)
++||+++.||+|++++++|.++|++|+.+.+++.. .++ ...||.+++|+|+++ |.+++||.+|++||++..
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~----~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVS----RKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchh----HHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 78999999999999999999999999999886432 223 356999999999944 789999999999999864
No 59
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=1.4e-14 Score=105.96 Aligned_cols=186 Identities=19% Similarity=0.202 Sum_probs=130.9
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHHHhCCCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQP 80 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~~~~~~~ 80 (219)
||||-+..||||.|+|+++..+|||++.+.....+.+. +- .+--..+||+|+ ++|..+.||..|++|+++..+++
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe~T-p~---rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~ 76 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDEET-PI---RMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKP 76 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcccC-hh---hhhcccccceEEccccccchhhhHHHHHHHHhcCch
Confidence 79999999999999999999999999998887544222 22 222357899999 89999999999999999998753
Q ss_pred CCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHH-------------HHHHhcCCc--------HHHHHHHHHHHHHHHH
Q 027737 81 PLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVK-------------YIEEKAGAD--------ERDIWAKTHIGKGFAA 139 (219)
Q Consensus 81 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~--------~~~~~~~~~l~~~l~~ 139 (219)
-+.+ ..+..++.|+..+......+....+.+ ++..+.... ...+...+++...|+.
T Consensus 77 ~lt~---~~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~ 153 (215)
T COG2999 77 LLTG---KVRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRA 153 (215)
T ss_pred hhcc---CcCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHH
Confidence 3332 224456667766665444433333222 222221111 1234567788889999
Q ss_pred HHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHH
Q 027737 140 LEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQ 206 (219)
Q Consensus 140 le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~ 206 (219)
++..+..+ . -+...+|. -|+.+++.|..+-...|..++ ..+..|..+|++.-.+.
T Consensus 154 l~~Li~~~--s-~~n~~l~~-------ddi~vFplLRnlt~v~gi~wp--s~v~dy~~~msektqV~ 208 (215)
T COG2999 154 LDKLIVGP--S-AVNGELSE-------DDILVFPLLRNLTLVAGIQWP--SRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHhcCc--c-hhccccch-------hhhhhhHHhccceecccCCCc--HHHHHHHHHHHHhhCcc
Confidence 99988762 2 45668999 999999999988444455554 47999999998865543
No 60
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.58 E-value=4.4e-15 Score=104.43 Aligned_cols=111 Identities=25% Similarity=0.261 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHH-H-hcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccccccc
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIE-E-KAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQ 166 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~ 166 (219)
+++++++|+.+..+.+.+.+...+..... . ....+...+....++.+.++.+|++|++ ++|++|+++|+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~t~------- 72 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAG--GPYLLGDRFSV------- 72 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcC--CCeeeCCCcch-------
Confidence 47899999999988887765433222110 0 0112344567788899999999999986 78999999999
Q ss_pred ceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhC
Q 027737 167 ADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAV 209 (219)
Q Consensus 167 aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 209 (219)
|||++++.+.++ ...+.+++.+|++.+|++++.++|++++++
T Consensus 73 aDi~~~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 73 ADAYLFVVLRWA-PGVGLDLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHH-hhcCCChhhChHHHHHHHHHHhCHHhHhhC
Confidence 999999999887 555666678999999999999999999864
No 61
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.57 E-value=1.4e-14 Score=92.46 Aligned_cols=71 Identities=49% Similarity=0.790 Sum_probs=63.0
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
++||+++.||+|++++++|+++|++|+.+.++..... ..++.+.+|.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGE--QEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCC--CHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999998854431 2257889999999999998999999999999984
No 62
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.56 E-value=9.5e-15 Score=103.29 Aligned_cols=111 Identities=16% Similarity=0.105 Sum_probs=87.7
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccc
Q 027737 86 DLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYL 165 (219)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~ 165 (219)
++..++++++|+.+.+..+.+.+.......... ++..+....++.+.++.||+.|++ ++|++|+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~le~~L~~--~~yl~Gd~~tl------ 70 (115)
T cd03196 3 DPAALKEMLALIAENDNEFKHHLDRYKYADRYP----EESEEEYRQQAEAFLKDLEARLQQ--HSYLLGDKPSL------ 70 (115)
T ss_pred chHHHHHHHHHHHHcchhhHHHHHhccchhhcC----cccHHHHHHHHHHHHHHHHHHHcc--CCccCCCCccH------
Confidence 678899999999999988877655433322111 123667788899999999999987 79999999999
Q ss_pred cceEEehhHHHHHHhhc--CCCCCCChHHHHHHHHHhCChhHHhhC
Q 027737 166 QADLYLAPQLYAAVNRF--NLDMTQFPLLLRLHEAYSKLPAFQNAV 209 (219)
Q Consensus 166 ~aD~~l~~~l~~~~~~~--~~~~~~~p~l~~~~~~~~~~p~~~~~~ 209 (219)
|||++++.+.++.... +..++.+|+|.+|++++.++|++++++
T Consensus 71 -ADi~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 71 -ADWAIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred -HHHHHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhhC
Confidence 9999999887662221 233588999999999999999999864
No 63
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.56 E-value=2.1e-14 Score=100.11 Aligned_cols=104 Identities=19% Similarity=0.224 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccc
Q 027737 88 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQA 167 (219)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~a 167 (219)
.++++++.|+.++++.+.+.+..... ..++..+.....+.+.|..||++|++ ++|++|+++|+ |
T Consensus 2 ~~ra~~r~w~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~-------a 65 (107)
T cd03186 2 VARARSRLLMHRIEQDWYPLVDTIEK-------GRKKEAEKARKELRESLLALAPVFAH--KPYFMSEEFSL-------V 65 (107)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-------CcHHHHHHHHHHHHHHHHHHHHHHcC--CCcccCCCCcH-------H
Confidence 57899999999999877665533221 11444567888899999999999987 79999999999 9
Q ss_pred eEEehhHHHHHHhhcCCCC-CCChHHHHHHHHHhCChhHHhh
Q 027737 168 DLYLAPQLYAAVNRFNLDM-TQFPLLLRLHEAYSKLPAFQNA 208 (219)
Q Consensus 168 D~~l~~~l~~~~~~~~~~~-~~~p~l~~~~~~~~~~p~~~~~ 208 (219)
||++++.+..+ ...+.+. ..+|+|.+|++++.+||+++++
T Consensus 66 Di~~~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 66 DCALAPLLWRL-PALGIELPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHH-HHcCCCCcccchHHHHHHHHHHCCHHHHHh
Confidence 99999998666 4456543 5799999999999999999976
No 64
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.55 E-value=2.5e-14 Score=101.53 Aligned_cols=110 Identities=20% Similarity=0.189 Sum_probs=84.8
Q ss_pred CCCHHHHHHHHHHHHHHhccchhhHHHHH-HHHHHHh-------cCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecc
Q 027737 84 PSDLKRKAINYQAANIVSSSIQPLQNLAV-VKYIEEK-------AGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGD 155 (219)
Q Consensus 84 p~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~ 155 (219)
|.++.+++++++|+.+..+.+.+.+...+ ....... ...+...+....++.+.|+.||++|++ ++|++|+
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~Gd 79 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAK--KGYFVGD 79 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHcc--CCCCCCC
Confidence 46788999999999999888876654222 2111110 012334456677899999999999987 7999999
Q ss_pred cccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCCh
Q 027737 156 EVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLP 203 (219)
Q Consensus 156 ~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p 203 (219)
++|+ |||++++.+.++ ...+...+.+|+|.+|++++.++|
T Consensus 80 ~~t~-------ADi~l~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 80 KLTA-------ADIMMSFPLEAA-LARGPLLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CCCH-------HHHHHHHHHHHH-HHcCcccccCchHHHHHHHHhcCC
Confidence 9999 999999999888 555545788999999999999987
No 65
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=3.8e-14 Score=110.64 Aligned_cols=192 Identities=23% Similarity=0.291 Sum_probs=136.1
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcc--eEEEecC--CCCC-CCCh------------------hhhccCCC----CCCc
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEY--EYKAVNL--VKGE-QFSP------------------DFLKINPI----GYVP 54 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~--~~~~v~~--~~~~-~~~~------------------~~~~~~p~----~~vP 54 (219)
+.||.+-.||+++|..+.=..+|++- ....+.+ ..+. ...+ -+..-.|. -+||
T Consensus 52 YhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVP 131 (324)
T COG0435 52 YHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVP 131 (324)
T ss_pred EEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEE
Confidence 56899999999999999999999852 2222222 1100 0000 01112222 3689
Q ss_pred eEEeC---CeeeeehHHHHHHHHHhCC-----CCCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHH
Q 027737 55 ALVDG---DFVVSDSFAILMYLEEKYP-----QPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERD 126 (219)
Q Consensus 55 ~L~~~---~~~l~es~aI~~yl~~~~~-----~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (219)
||.|. -.+-.||..|++.+...+. ...|+|. ..+.+++.+..++.+.+..-+ ++. +-...+++-
T Consensus 132 VLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~--~Lr~eId~~n~~Iy~~vNNGV----Yk~--GFA~tq~aY 203 (324)
T COG0435 132 VLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPE--ALRTEIDELNKWIYDTVNNGV----YKA--GFATTQEAY 203 (324)
T ss_pred EEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCH--HHHHHHHHHHhhhcccccCce----eee--cccchHHHH
Confidence 99964 2556799999999998764 2457774 568899999999888775422 110 111234566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHH----hhcCCC---CCCChHHHHHHHHH
Q 027737 127 IWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAV----NRFNLD---MTQFPLLLRLHEAY 199 (219)
Q Consensus 127 ~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~----~~~~~~---~~~~p~l~~~~~~~ 199 (219)
+..-..+-..|+.||+.|++ +.|++||++|- ||+-|++.|.+.. ..+.+. ...||+|..|++.+
T Consensus 204 eea~~~lF~~Ld~lE~~L~~--~ryl~Gd~lTE-------AD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~L 274 (324)
T COG0435 204 EEAVKKLFEALDKLEQILSE--RRYLTGDQLTE-------ADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDL 274 (324)
T ss_pred HHHHHHHHHHHHHHHHHhhc--CeeeccccchH-------hhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHH
Confidence 67777788899999999998 89999999999 9999999987662 223333 46699999999999
Q ss_pred hCChhHHhhCC
Q 027737 200 SKLPAFQNAVP 210 (219)
Q Consensus 200 ~~~p~~~~~~~ 210 (219)
.+.|+|.+++.
T Consensus 275 Yq~pg~~~T~d 285 (324)
T COG0435 275 YQLPGFAETVD 285 (324)
T ss_pred hcCcccccccc
Confidence 99999998863
No 66
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.52 E-value=6.3e-14 Score=100.00 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccce
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQAD 168 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD 168 (219)
+++++++|+.+++..+.+.+...+.........+.+..+....++.+.|+.||+.|+. ++|++|+++|+ ||
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~si-------aD 71 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLK--RTYLVGERLTL-------AD 71 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHcc--CceeccCCccH-------HH
Confidence 3688999999999888776654443332211223455677888899999999999987 78999999999 99
Q ss_pred EEehhHHHHHHhhcCCC---CCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 169 LYLAPQLYAAVNRFNLD---MTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 169 ~~l~~~l~~~~~~~~~~---~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
+++++.+.++ .....+ .+.+|++.+|++++.++|++++++++.+
T Consensus 72 i~l~~~~~~~-~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 72 IFVAGALLLG-FTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHHHHHHHHH-HHHHcCHHHHHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 9999999887 323222 3679999999999999999999988764
No 67
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.51 E-value=5.4e-14 Score=100.73 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccce
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQAD 168 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD 168 (219)
+||+.+.|+++++..+.+... .+.. ++..+...+++.+.|+.+|+.|.+.+++|++|+++|+ ||
T Consensus 2 ~ra~~r~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~-------aD 65 (124)
T cd03184 2 EKAQQKLLLERFSKVVSAFYK-----LLGA----PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGM-------VD 65 (124)
T ss_pred hHHHHHHHHHHHhhhhHHHHH-----HHhc----cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccH-------HH
Confidence 478999999998755544332 1211 3445677788999999999999864579999999999 99
Q ss_pred EEehhHHHHHHhhcC------CCCCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 169 LYLAPQLYAAVNRFN------LDMTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 169 ~~l~~~l~~~~~~~~------~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
+++++.+.++ ...+ ...+.+|+|.+|++++.++|++++++++..
T Consensus 66 i~~~~~~~~~-~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~ 115 (124)
T cd03184 66 YMIWPWFERL-EALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQAFYTDTE 115 (124)
T ss_pred HHhhHHHHHH-HHHHhhccccCCcccChHHHHHHHHhccChHHHHHhCCHH
Confidence 9999999876 3222 346889999999999999999999987653
No 68
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.51 E-value=6.8e-14 Score=98.99 Aligned_cols=111 Identities=21% Similarity=0.176 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHH-HHHHH---hcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccccc
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVV-KYIEE---KAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICY 164 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~ 164 (219)
+++++.+|+.+..+.+.+.+..... ..... ...+++..+....++.+.++.||++|++ ++|++|+++|+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~----- 74 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSK--SKYLAGDSFTL----- 74 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHccc--CcccCCCCccH-----
Confidence 5788999999988877665443222 11111 1223444566778899999999999987 79999999999
Q ss_pred ccceEEehhHHHHHHhhcC--CCCCCChHHHHHHHHHhCChhHHhhC
Q 027737 165 LQADLYLAPQLYAAVNRFN--LDMTQFPLLLRLHEAYSKLPAFQNAV 209 (219)
Q Consensus 165 ~~aD~~l~~~l~~~~~~~~--~~~~~~p~l~~~~~~~~~~p~~~~~~ 209 (219)
|||++++.+.++.. .+ ..++.+|+|.+|++++.++|++++++
T Consensus 75 --aDi~l~~~~~~~~~-~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 75 --ADLSHLPYLQYLMA-TPFAKLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred --HHHHHHHHHHHHHH-ccchhhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 99999999988732 22 23567999999999999999999864
No 69
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.51 E-value=3.2e-14 Score=101.00 Aligned_cols=111 Identities=21% Similarity=0.284 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccce
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQAD 168 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD 168 (219)
+++++++|+.+....+.+.+...+..... ..+...+....++.+.|+.||++|++ ++|++|+++|+ ||
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~s~-------aD 69 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILF---GGAEPPEEKLDKLEEALDFLETFLEG--SDYVAGDQLTI-------AD 69 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHcc--CCeeCCCCcCH-------HH
Confidence 47889999999887776654433332211 12234556777899999999999986 78999999999 99
Q ss_pred EEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCC
Q 027737 169 LYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPE 211 (219)
Q Consensus 169 ~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 211 (219)
+++++.+.++....+.+...+|+|.+|++++.++|++++....
T Consensus 70 i~l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~ 112 (118)
T cd03177 70 LSLVATVSTLEALLPLDLSKYPNVRAWLERLKALPPYEEANGK 112 (118)
T ss_pred HHHHHHHHHHHHhcCCChhhCchHHHHHHHHHcccchHHHHHH
Confidence 9999999988322566567799999999999999999986543
No 70
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.50 E-value=9e-14 Score=89.92 Aligned_cols=65 Identities=28% Similarity=0.333 Sum_probs=57.7
Q ss_pred eEEcccC-------CCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYW-------RSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~-------~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
+.||.++ .||+|++++++|+++|++|+.+.++.. ..+|.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~----------~~~p~g~vP~l~~~g~~l~es~~I~~yL~ 70 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP----------WRSPTGKLPFLELNGEKIADSEKIIEYLK 70 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc----------ccCCCcccCEEEECCEEEcCHHHHHHHHh
Confidence 4677777 799999999999999999999988732 27899999999999999999999999998
Q ss_pred Hh
Q 027737 75 EK 76 (219)
Q Consensus 75 ~~ 76 (219)
++
T Consensus 71 ~~ 72 (72)
T cd03054 71 KK 72 (72)
T ss_pred hC
Confidence 74
No 71
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.50 E-value=8.7e-14 Score=98.39 Aligned_cols=110 Identities=15% Similarity=0.044 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHHHHHHHH--H----hcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccc
Q 027737 86 DLKRKAINYQAANIVSSSIQPLQNLAVVKYIE--E----KAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFL 159 (219)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~ 159 (219)
++.+++.+++|+.+++..+.+.+...+..... . ....++..+....++.+.|..||+.|++ ++|++|+++|+
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~--~~~l~gd~~t~ 78 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAG--SPYVAGDRFTI 78 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcC--CCcccCCCCCH
Confidence 46789999999999887776554433322110 0 1123455677888899999999999986 78999999999
Q ss_pred cccccccceEEehhHHHHHHhhcCCCC-CCChHHHHHHHHHhCChhH
Q 027737 160 YYICYLQADLYLAPQLYAAVNRFNLDM-TQFPLLLRLHEAYSKLPAF 205 (219)
Q Consensus 160 ~~~~~~~aD~~l~~~l~~~~~~~~~~~-~~~p~l~~~~~~~~~~p~~ 205 (219)
|||++++.+.++ ...+.++ ..+|+|.+|++++.++|++
T Consensus 79 -------aDi~l~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 79 -------ADITAFVGLDFA-KVVKLRVPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred -------HHHHHHHHhHHH-HhcCCCCccccHHHHHHHHHHHhccCC
Confidence 999999999988 5566654 5799999999999999974
No 72
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.49 E-value=1.3e-13 Score=96.31 Aligned_cols=107 Identities=21% Similarity=0.197 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccccccc
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIEEK--AGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQ 166 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~ 166 (219)
+++++++|+.+..+.+.+.+...+....... ...+...+...+++.+.|+.+|+.|++ ++|++|+++|+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~--~~~l~g~~~t~------- 72 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAG--RPYLAGDRFTL------- 72 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCC--CCcccCCCCCH-------
Confidence 4788999999998888776654333222111 112344566788899999999999987 78999999999
Q ss_pred ceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhH
Q 027737 167 ADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 205 (219)
Q Consensus 167 aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 205 (219)
||+++++.+... ...+.....+|+|.+|++++.++|++
T Consensus 73 aDi~~~~~~~~~-~~~~~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 73 ADIPLGCSAYRW-FELPIERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHH-HHcccccccCchHHHHHHHHHhCCCC
Confidence 999999998644 34444568899999999999999975
No 73
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.49 E-value=1.1e-13 Score=99.14 Aligned_cols=110 Identities=20% Similarity=0.216 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccc
Q 027737 88 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQA 167 (219)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~a 167 (219)
.+++++++|+.++++.+.+.+..... . .+...+....++.+.++.||+.|++ ++|++|+++|+ |
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~-------A 65 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLA----A---KGEEREKAKEEALEALKVLEEELGG--KPFFGGDTIGY-------V 65 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHc----c---chHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCcch-------H
Confidence 46899999999998877665433221 1 1344556778899999999999987 79999999999 9
Q ss_pred eEEehhHHHHHHh---hcCC---CCCCChHHHHHHHHHhCChhHHhhCCCCC
Q 027737 168 DLYLAPQLYAAVN---RFNL---DMTQFPLLLRLHEAYSKLPAFQNAVPEKQ 213 (219)
Q Consensus 168 D~~l~~~l~~~~~---~~~~---~~~~~p~l~~~~~~~~~~p~~~~~~~~~~ 213 (219)
||++++.+.++.. ..+. +.+.+|++.+|++++.++|+++++++..+
T Consensus 66 Di~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 117 (126)
T cd03185 66 DIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRD 117 (126)
T ss_pred HHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCHH
Confidence 9999999988622 1232 24679999999999999999999987653
No 74
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.48 E-value=1.5e-13 Score=100.10 Aligned_cols=116 Identities=16% Similarity=0.250 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccc
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADER-DIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQA 167 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~a 167 (219)
+.+.+++.++.+.+.........+.. .. ...+. .....+.+.+.|+.||++|..++++|++|+++|+ |
T Consensus 3 e~a~iD~i~~~v~D~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~-------A 71 (137)
T cd03208 3 ERALIDMYVEGTADLMEMILMLPFLP---PE-EKEAKLALIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSR-------A 71 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCC---hh-hHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCH-------H
Confidence 46677777777666554332211100 00 11111 2334456689999999999844478999999999 9
Q ss_pred eEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCCCC
Q 027737 168 DLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPD 215 (219)
Q Consensus 168 D~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~ 215 (219)
|+++++.+.++....+..++.+|+|.+|++++.++|++++++.++...
T Consensus 72 Di~l~~~l~~~~~~~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~~~ 119 (137)
T cd03208 72 DIHLLEAILMVEELDPSLLSDFPLLQAFKTRISNLPTIKKFLQPGSPR 119 (137)
T ss_pred HHHHHHHHHHHHHhchhhhccChHHHHHHHHHHcCHHHHHHHhcCCCC
Confidence 999999999883323334688999999999999999999999877543
No 75
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.47 E-value=2.3e-13 Score=97.77 Aligned_cols=113 Identities=17% Similarity=0.119 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcC-CCCeeecccccccccccccc
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDY-AGKYATGDEVFLYYICYLQA 167 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~-~~~fl~G~~~s~~~~~~~~a 167 (219)
+++.++..++.+.+............ .+...+.....+.+.|..||++|+.+ +++|++|+++|+ |
T Consensus 3 e~~~vd~~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~-------A 68 (126)
T cd03210 3 EAALIDMVNDGVEDLRLKYVRMIYQN-------YEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISF-------A 68 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccH-------H
Confidence 45667776666554333222211110 12334556677899999999999864 468999999999 9
Q ss_pred eEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCCCCCCC
Q 027737 168 DLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPD 215 (219)
Q Consensus 168 D~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~ 215 (219)
|+++++.+.++....+..++.+|+|.+|++++.++|+++++++.+...
T Consensus 69 Di~l~~~~~~~~~~~~~~~~~~P~l~~~~~rv~~~p~v~~~~~~~~~~ 116 (126)
T cd03210 69 DYNLFDLLDIHLVLAPGCLDAFPLLKAFVERLSARPKLKAYLESDAFK 116 (126)
T ss_pred HHHHHHHHHHHHHhChHhhhcChHHHHHHHHHHhCcHHHHHHhCcCCC
Confidence 999999998883223334688999999999999999999999887543
No 76
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.46 E-value=3.2e-13 Score=96.27 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccce
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQAD 168 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD 168 (219)
+++++++..+.+.+.........+. . ..+...+.....+.+.+..||++|++ ++|++|+++|+ ||
T Consensus 2 e~~~id~~~~~~~d~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~T~-------aD 66 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMGLARICYS----P--DFEKLKPDYLAKLPDKLKLFSDFLGD--RPWFAGDKITY-------VD 66 (121)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhcC----c--chHHHHHHHHHHHHHHHHHHHHHhCC--CCCcCCCCccH-------HH
Confidence 4567777777766644332221111 1 11344556778889999999999986 68999999999 99
Q ss_pred EEehhHHHHHHhhc-CCCCCCChHHHHHHHHHhCChhHHhhCCCCCCC
Q 027737 169 LYLAPQLYAAVNRF-NLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPD 215 (219)
Q Consensus 169 ~~l~~~l~~~~~~~-~~~~~~~p~l~~~~~~~~~~p~~~~~~~~~~~~ 215 (219)
+++++.+.++ ... ...++.+|+|.+|++++.++|+++++++++...
T Consensus 67 i~l~~~~~~~-~~~~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~~~~~ 113 (121)
T cd03209 67 FLLYEALDQH-RIFEPDCLDAFPNLKDFLERFEALPKISAYMKSDRFI 113 (121)
T ss_pred HHHHHHHHHH-HHhCccccccChHHHHHHHHHHHCHHHHHHHhcccCc
Confidence 9999999888 433 333678999999999999999999999888543
No 77
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=7.3e-13 Score=102.66 Aligned_cols=192 Identities=21% Similarity=0.197 Sum_probs=132.8
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcc--eEEEecCCCCCCCChhh------------------------------hccCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEY--EYKAVNLVKGEQFSPDF------------------------------LKINP 49 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~--~~~~v~~~~~~~~~~~~------------------------------~~~~p 49 (219)
+-||....||+++|..+.+..+|++- -...+.+.. +.+...| ....|
T Consensus 38 yhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~-d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~p 116 (319)
T KOG2903|consen 38 YHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHL-DDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIASP 116 (319)
T ss_pred EEEEEeccCcHHHHHHHHHHHcCccccceeEEecccc-CCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcCC
Confidence 45899999999999999999999852 222222200 0000000 01112
Q ss_pred ----CCCCceEEeC---CeeeeehHHHHHHHHHhC---------CCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHH
Q 027737 50 ----IGYVPALVDG---DFVVSDSFAILMYLEEKY---------PQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVV 113 (219)
Q Consensus 50 ----~~~vP~L~~~---~~~l~es~aI~~yl~~~~---------~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 113 (219)
..+||||-|. ..+-.||..|++.+.+.+ +.-.|+| +..+++++++..|+.+.+..-+ +
T Consensus 117 ~Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P--~~L~~~Ide~N~wvy~~INNGV----Y 190 (319)
T KOG2903|consen 117 NYTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYP--SSLRAQIDETNSWVYDKINNGV----Y 190 (319)
T ss_pred CCCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCC--HHHHHHHhhhhceecccccCce----e
Confidence 1369999964 467789999999999332 2334666 4568999999999887665422 1
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhh----cCCC----
Q 027737 114 KYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNR----FNLD---- 185 (219)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~----~~~~---- 185 (219)
+. +-....+.-+..-.++-+.|+.+|++|+.+-+.|++|+++|- ||+-|++.+.+.... +.+.
T Consensus 191 k~--GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTe-------aDirLy~TiIRFD~VY~~hFKCn~~~i 261 (319)
T KOG2903|consen 191 KC--GFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTE-------ADIRLYTTIIRFDEVYVQHFKCNKKTI 261 (319)
T ss_pred ee--ccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccch-------hheeeeeeEEeehhhhheeeecchhhh
Confidence 11 111134555666677888999999999985445999999999 999999998766222 2232
Q ss_pred CCCChHHHHHHHHHhC-ChhHHhhC
Q 027737 186 MTQFPLLLRLHEAYSK-LPAFQNAV 209 (219)
Q Consensus 186 ~~~~p~l~~~~~~~~~-~p~~~~~~ 209 (219)
.++||+|..|..++.+ .|+++.+.
T Consensus 262 r~~Yp~l~~~lk~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 262 RDEYPNLHNWLKNIYWNIPGFSSTT 286 (319)
T ss_pred hccCcHHHHHHHHHHhhccchhhcc
Confidence 3589999999999999 99998875
No 78
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.45 E-value=3.8e-13 Score=98.62 Aligned_cols=109 Identities=19% Similarity=0.140 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccc
Q 027737 88 KRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQA 167 (219)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~a 167 (219)
..++.+++|++|....+.+.+. .... ..+++..+....++.+.|+.||++|++ ++|++|+++|+ |
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~l~~~l~~LE~~L~~--~~yl~Gd~~Tl-------A 67 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVY----KAGF--ATTQEAYDEAVDELFEALDRLEELLSD--RRYLLGDRLTE-------A 67 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHH----HHhh--ccCHHHHHHHHHHHHHHHHHHHHHHcc--CCeeeCCCccH-------H
Confidence 4578899999999987765432 1111 234556677888999999999999987 79999999999 9
Q ss_pred eEEehhHHHHHHhh----cC---CCCCCChHHHHHHHHHhCChhHHhhCCC
Q 027737 168 DLYLAPQLYAAVNR----FN---LDMTQFPLLLRLHEAYSKLPAFQNAVPE 211 (219)
Q Consensus 168 D~~l~~~l~~~~~~----~~---~~~~~~p~l~~~~~~~~~~p~~~~~~~~ 211 (219)
||++++.+.++... .. ..++.+|+|.+|++++.++|++++++..
T Consensus 68 Di~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~ 118 (142)
T cd03190 68 DIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNF 118 (142)
T ss_pred HHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCH
Confidence 99999998765211 11 1246899999999999999999998865
No 79
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.43 E-value=3.9e-13 Score=96.38 Aligned_cols=111 Identities=16% Similarity=0.154 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHH-----HHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccccc
Q 027737 90 KAINYQAANIVSSSIQPLQNLAVVKY-----IEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICY 164 (219)
Q Consensus 90 ~a~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~ 164 (219)
++++++|+.+....+.+.+...+... .......++..+...+++.+.++.+|++|.+ +++|++|+++|+
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~-~~~~l~Gd~~t~----- 75 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLK-DKPFLAGDEISI----- 75 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCcccCCCCCH-----
Confidence 56788999998877765433221111 1111123455667788899999999997533 268999999999
Q ss_pred ccceEEehhHHHHHHhhcCCC-CCCChHHHHHHHHHhC--ChhHHhhC
Q 027737 165 LQADLYLAPQLYAAVNRFNLD-MTQFPLLLRLHEAYSK--LPAFQNAV 209 (219)
Q Consensus 165 ~~aD~~l~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~--~p~~~~~~ 209 (219)
|||++++.+.+. ...+.+ ++.+|+|.+|++++.+ ||+++++.
T Consensus 76 --ADi~l~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 76 --ADLSAVCEIMQP-EAAGYDVFEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred --HHHHHHHHHHHH-HhcCCcccccCchHHHHHHHHHHhcchhHHHHH
Confidence 999999988777 555654 5889999999999999 99999865
No 80
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.41 E-value=4.4e-13 Score=94.58 Aligned_cols=111 Identities=20% Similarity=0.075 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHHH-HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccc
Q 027737 87 LKRKAINYQAANIVSSSIQPLQNLAV-VKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYL 165 (219)
Q Consensus 87 ~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~ 165 (219)
|.++++.++|+.++.+.+.+...... ...+.. ...+...+.....+.+.+..+|.+|.+ +++|++| ++|+
T Consensus 1 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~l~G-~fSi------ 71 (114)
T cd03195 1 PRQRARARQVQAWLRSDLLPIRVERSTEVVFAG-AKAEPLSEAAQAAAEKLIAVAEALLPP-GAANLFG-EWCI------ 71 (114)
T ss_pred CHhhHHHHHHHHHHHhhHHHHHHhCCccceecC-CCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCcccC-CccH------
Confidence 35789999999999998876521111 110111 111134466778889999999999973 3589999 5999
Q ss_pred cceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCC
Q 027737 166 QADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVP 210 (219)
Q Consensus 166 ~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 210 (219)
||+++++.+.+. ...|.++. |++.+|.+|+.+||+++++++
T Consensus 72 -AD~~l~~~~~~~-~~~g~~l~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 72 -ADTDLALMLNRL-VLNGDPVP--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred -HHHHHHHHHHHH-HHcCCCCC--HHHHHHHHHHHCCHHHHHHHh
Confidence 999999999999 88888774 999999999999999999875
No 81
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.39 E-value=6.7e-13 Score=95.52 Aligned_cols=84 Identities=23% Similarity=0.277 Sum_probs=70.3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhc--------------CCCCeeecccccccccccccceEEehhHHHHHHh----hcC
Q 027737 122 ADERDIWAKTHIGKGFAALEKLLKD--------------YAGKYATGDEVFLYYICYLQADLYLAPQLYAAVN----RFN 183 (219)
Q Consensus 122 ~~~~~~~~~~~l~~~l~~le~~L~~--------------~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~----~~~ 183 (219)
+++..+...+++...|+.||++|.+ .+++|++|+++|+ |||++++.+.++.. ..+
T Consensus 23 ~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTl-------ADi~l~p~L~~~~~~~~~~~g 95 (134)
T cd03198 23 NPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTL-------ADCNLLPKLHIVKVVAKKYRN 95 (134)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCH-------HHHHHHHHHHHHHHHHHhhcC
Confidence 3456677888999999999999986 2468999999999 99999999986621 125
Q ss_pred CCC-CCChHHHHHHHHHhCChhHHhhCCCC
Q 027737 184 LDM-TQFPLLLRLHEAYSKLPAFQNAVPEK 212 (219)
Q Consensus 184 ~~~-~~~p~l~~~~~~~~~~p~~~~~~~~~ 212 (219)
... +.+|+|.+|++++.+||+|+++++..
T Consensus 96 ~~i~~~~P~L~aw~~ri~aRPsfk~t~~~~ 125 (134)
T cd03198 96 FEIPADLTGLWRYLKNAYQREEFTNTCPAD 125 (134)
T ss_pred CCccccCHHHHHHHHHHHCCHHHHHHcCCH
Confidence 553 78999999999999999999999865
No 82
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.36 E-value=6.4e-13 Score=91.88 Aligned_cols=77 Identities=25% Similarity=0.289 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCCh
Q 027737 124 ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLP 203 (219)
Q Consensus 124 ~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p 203 (219)
...+....++.+.++.||++|++ ++|++|+++|+ |||++++.+.+. ...+. .+.+|+|.+|++++.++|
T Consensus 26 ~~~~~~~~~~~~~l~~le~~l~~--~~~l~g~~~t~-------aDi~~~~~~~~~-~~~~~-~~~~p~l~~w~~~~~~~p 94 (103)
T cd03207 26 PARMAGFGSYDDVLAALEQALAK--GPYLLGERFTA-------ADVLVGSPLGWG-LQFGL-LPERPAFDAYIARITDRP 94 (103)
T ss_pred chhhhhhhhHHHHHHHHHHHHcc--CCcccCCccCH-------HHHHHHHHHHHH-HHcCC-CCCChHHHHHHHHHHcCH
Confidence 34556678899999999999987 78999999999 999999999988 44443 578999999999999999
Q ss_pred hHHhhCCC
Q 027737 204 AFQNAVPE 211 (219)
Q Consensus 204 ~~~~~~~~ 211 (219)
+++++...
T Consensus 95 ~~~~~~~~ 102 (103)
T cd03207 95 AFQRAAAI 102 (103)
T ss_pred HHHHHhcc
Confidence 99998754
No 83
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.34 E-value=6.7e-12 Score=89.33 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhc-CCCCeeeccccccccccc
Q 027737 86 DLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKD-YAGKYATGDEVFLYYICY 164 (219)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~-~~~~fl~G~~~s~~~~~~ 164 (219)
|+.+|+.+++++.+.. .+.. ..+...+.+. ..+++.+.++.||+.|++ .+++|++| ++|+
T Consensus 1 d~~~ra~~~~~~~~~~-~~~~---~~~~~~~~~~---------~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tl----- 61 (120)
T cd03203 1 DPAKREFADELLAYTD-AFTK---ALYSSLIKGD---------PSAEAAAALDYIENALSKFDDGPFFLG-QFSL----- 61 (120)
T ss_pred CHHHHHHHHHHHHHHH-HHHH---HHHHHHhcCC---------chHHHHHHHHHHHHHHHhcCCCCCcCC-CccH-----
Confidence 4678999999999921 1211 1112222111 122356778888888873 23799999 9999
Q ss_pred ccceEEehhHHHHHHh----hcCCCC-CCChHHHHHHHHHhCChhHHhhCCCC
Q 027737 165 LQADLYLAPQLYAAVN----RFNLDM-TQFPLLLRLHEAYSKLPAFQNAVPEK 212 (219)
Q Consensus 165 ~~aD~~l~~~l~~~~~----~~~~~~-~~~p~l~~~~~~~~~~p~~~~~~~~~ 212 (219)
|||++++.+.++.. ..+.++ +.+|+|.+|++++.++|+++++.+..
T Consensus 62 --ADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~~ 112 (120)
T cd03203 62 --VDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQDP 112 (120)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCCH
Confidence 99999999876521 245554 68999999999999999999998764
No 84
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.33 E-value=2e-12 Score=88.99 Aligned_cols=99 Identities=19% Similarity=0.198 Sum_probs=72.6
Q ss_pred HHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehh
Q 027737 94 YQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAP 173 (219)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~ 173 (219)
.+|+.+..+.+.+............ .....+....++.+.++.+|+.|++ ++|++|+++|+ ||+++++
T Consensus 2 ~~w~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~G~~~t~-------aDi~~~~ 69 (100)
T cd03206 2 QRWLSVAAGEIANGPAAARLITLFG---APLDKETAIARAHRLLRLLEEHLAG--RDWLAGDRPTI-------ADVAVYP 69 (100)
T ss_pred ceehhhhhhhcccchhHHHHHHHhC---CHhHHHHHHHHHHHHHHHHHHHHcc--CCccCCCCCCH-------HHHHHHH
Confidence 4577777776654322222111111 1123456778899999999999987 78999999999 9999999
Q ss_pred HHHHHHhhcCCCCCCChHHHHHHHHHhCChhH
Q 027737 174 QLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 205 (219)
Q Consensus 174 ~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 205 (219)
.+.+. ...+...+.+|+|.+|++++.++|++
T Consensus 70 ~~~~~-~~~~~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 70 YVALA-PEGGVDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHH-hccCCChhhCcHHHHHHHHHHhCcCC
Confidence 98765 44455567899999999999999975
No 85
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.32 E-value=3.5e-12 Score=87.15 Aligned_cols=95 Identities=13% Similarity=0.046 Sum_probs=74.7
Q ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 027737 70 LMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAG 149 (219)
Q Consensus 70 ~~yl~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~ 149 (219)
++||++.. .++|.++.+.+++++|++.....+.. ....++.+.++.+|++|.+ +
T Consensus 1 ~r~~~~~~---~~~~~~~~~~~~vd~~~d~~~~~l~~---------------------~~~~~~~~~l~~le~~L~~--~ 54 (96)
T cd03200 1 ARFLYRLL---GPAPNAPNAATNIDSWVDTAIFQLAE---------------------GSSKEKAAVLRALNSALGR--S 54 (96)
T ss_pred CchHHHHh---cccCCCchHHHHHHHHHHHHHHHHhc---------------------CCHHHHHHHHHHHHHHHcC--C
Confidence 47888883 49999999999999999975532210 1224456788899999987 7
Q ss_pred CeeecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhC
Q 027737 150 KYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSK 201 (219)
Q Consensus 150 ~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~ 201 (219)
+|++|+++|+ |||++++.+.+. +...+.+|+|.+|++|+.+
T Consensus 55 ~fl~Gd~~ti-------ADi~l~~~l~~~----~~~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 55 PWLVGSEFTV-------ADIVSWCALLQT----GLASAAPANVQRWLKSCEN 95 (96)
T ss_pred CccCCCCCCH-------HHHHHHHHHHHc----ccccccChHHHHHHHHHHh
Confidence 9999999999 999999988643 3334679999999999976
No 86
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.31 E-value=8.5e-12 Score=80.39 Aligned_cols=60 Identities=22% Similarity=0.289 Sum_probs=50.5
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHh
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEK 76 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~ 76 (219)
+.+++|.+++++|++.|++|+.+... . . ...+|.|+||+|++||.+++||.+|+.||+++
T Consensus 15 ~~~~~~~kv~~~L~elglpye~~~~~--~-----~--~~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 15 PDNASCLAVQTFLKMCNLPFNVRCRA--N-----A--EFMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCCCCHHHHHHHHHHcCCCcEEEecC--C-----c--cccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 57899999999999999999988432 1 1 12567899999999999999999999999863
No 87
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.30 E-value=5.9e-12 Score=85.60 Aligned_cols=71 Identities=32% Similarity=0.437 Sum_probs=62.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCC-C-CCChHHHHHHHHHh
Q 027737 123 DERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLD-M-TQFPLLLRLHEAYS 200 (219)
Q Consensus 123 ~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~-~-~~~p~l~~~~~~~~ 200 (219)
++..+....++.+.|+.+|+.|++ ++|++|+++|+ ||+++++.+.++ ...+.. . +++|+|.+|++++.
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~~--~~~l~G~~~t~-------ADi~~~~~~~~~-~~~~~~~~~~~~P~l~~w~~~~~ 92 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLKG--GPYLVGDKLTI-------ADIALFPMLDWL-ERLGPDFLFEKFPKLKKWYERMF 92 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--SSSSSBSS-CH-------HHHHHHHHHHHH-HHHTTTTTHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC--CCeeeccCCch-------hHHHHHHHHHHH-HHhCCCcccccCHHHHHHHHHHH
Confidence 446777888999999999999996 99999999999 999999999999 555554 4 89999999999999
Q ss_pred CCh
Q 027737 201 KLP 203 (219)
Q Consensus 201 ~~p 203 (219)
+||
T Consensus 93 ~~P 95 (95)
T PF00043_consen 93 ARP 95 (95)
T ss_dssp TSH
T ss_pred cCC
Confidence 998
No 88
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.27 E-value=8e-12 Score=88.14 Aligned_cols=74 Identities=22% Similarity=0.328 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCeeecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChh
Q 027737 126 DIWAKTHIGKGFAALEKLLKDY-AGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPA 204 (219)
Q Consensus 126 ~~~~~~~l~~~l~~le~~L~~~-~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~ 204 (219)
.+...+.+.+.+..+|.+++.. +++|++|+ +|+ ||+++++.+.+. ...+.+.. |+|.+|++++.++|+
T Consensus 39 ~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~-------ADi~l~~~~~~~-~~~~~~~~--P~l~~~~~rv~~rPs 107 (114)
T cd03194 39 SEAVQADIARIEAIWAECLARFQGGPFLFGD-FSI-------ADAFFAPVVTRF-RTYGLPLS--PAAQAYVDALLAHPA 107 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcH-------HHHHHHHHHHHH-HHcCCCCC--HHHHHHHHHHHCCHH
Confidence 4455666777777777777532 47899999 999 999999999988 55665433 999999999999999
Q ss_pred HHhhCC
Q 027737 205 FQNAVP 210 (219)
Q Consensus 205 ~~~~~~ 210 (219)
+++++.
T Consensus 108 v~~~~~ 113 (114)
T cd03194 108 MQEWIA 113 (114)
T ss_pred HHHHHh
Confidence 999874
No 89
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.25 E-value=3.1e-12 Score=88.54 Aligned_cols=102 Identities=18% Similarity=0.179 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHH--HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccccccc
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVK--YIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQ 166 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~ 166 (219)
+++++++|+.+..+.+.+.+...... ........++..+....++.+.++.||+.|++ ++|++|+++|+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~l~g~~~sl------- 72 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAG--RDFLVGDALTI------- 72 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHcc--CccccCCCCCH-------
Confidence 57899999999888776654322111 11122234456677889999999999999976 78999999999
Q ss_pred ceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHh
Q 027737 167 ADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYS 200 (219)
Q Consensus 167 aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~ 200 (219)
|||++++.+.++ ...+.+...+|+|.+|++++.
T Consensus 73 aDi~~~~~~~~~-~~~~~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 73 ADIALAAYTHVA-DEGGFDLADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHhc-cccCCChHhCccHHHHHHhhC
Confidence 999999999988 556666778999999999873
No 90
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.24 E-value=2.7e-11 Score=86.28 Aligned_cols=78 Identities=24% Similarity=0.304 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhc----CCC-CCCChHHHHHHHHHhC
Q 027737 127 IWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRF----NLD-MTQFPLLLRLHEAYSK 201 (219)
Q Consensus 127 ~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~----~~~-~~~~p~l~~~~~~~~~ 201 (219)
+...+.+.+.|..||++|.+. ++|++|+++|+ |||++++.+..+.... +.. .+.+|+|.+|++++.+
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~-~~fl~Gd~~Tl-------ADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~ 100 (121)
T cd03201 29 DGTEQALLDELEALEDHLKEN-GPFINGEKISA-------VDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFS 100 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCH-------HhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHC
Confidence 445567899999999999842 68999999999 9999999876662221 232 3789999999999999
Q ss_pred ChhHHhhCCCC
Q 027737 202 LPAFQNAVPEK 212 (219)
Q Consensus 202 ~p~~~~~~~~~ 212 (219)
||+|+++++.+
T Consensus 101 rps~~~t~~~~ 111 (121)
T cd03201 101 RESFVKTKAEK 111 (121)
T ss_pred CchhhhcCCCH
Confidence 99999998764
No 91
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.20 E-value=2.8e-11 Score=84.50 Aligned_cols=75 Identities=20% Similarity=0.125 Sum_probs=62.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCC--------CCeeecccccccccccccceEEehhHHHHHHhhcCCCC-----CCC
Q 027737 123 DERDIWAKTHIGKGFAALEKLLKDYA--------GKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDM-----TQF 189 (219)
Q Consensus 123 ~~~~~~~~~~l~~~l~~le~~L~~~~--------~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~-----~~~ 189 (219)
....+....++.+.|+.||++|.++. ++|++|+++|+ |||++++.+.++ ...+.+. ..+
T Consensus 24 ~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~Tl-------ADi~l~~~l~~~-~~~~~~~~~~~~~~~ 95 (111)
T cd03204 24 VEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTL-------ADISLGVTLHRL-KFLGLSRRYWGNGKR 95 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCH-------HHHHHHHHHHHH-HHcCccccccccccC
Confidence 35567788899999999999998621 25999999999 999999999988 4445442 579
Q ss_pred hHHHHHHHHHhCChhH
Q 027737 190 PLLLRLHEAYSKLPAF 205 (219)
Q Consensus 190 p~l~~~~~~~~~~p~~ 205 (219)
|+|.+|++|+.+||+|
T Consensus 96 P~l~~w~~rv~aRpsf 111 (111)
T cd03204 96 PNLEAYFERVLQRESF 111 (111)
T ss_pred hHHHHHHHHHHcCCCC
Confidence 9999999999999975
No 92
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.19 E-value=7.6e-10 Score=83.26 Aligned_cols=172 Identities=20% Similarity=0.219 Sum_probs=125.1
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCCCCCCCC-CC
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLP-SD 86 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~~~~l~p-~~ 86 (219)
+...-|..|..+|.++++||..+... ..++ ++|.|++|.|..|.+.++|-.+|+.++..+.-. |.. -+
T Consensus 32 ~d~ascLAVqtfLrMcnLPf~v~~~~-------Naef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~~~--l~s~ls 100 (257)
T KOG3027|consen 32 PDNASCLAVQTFLRMCNLPFNVRQRA-------NAEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGVT--LTSWLS 100 (257)
T ss_pred ccchhHHHHHHHHHHcCCCceeeecC-------Cccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhccc--hhhhhh
Confidence 35667999999999999999877654 3333 679999999999999999999999999998531 211 13
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHHHH---------------------------HH---------HHHhcCCcHHHHHHH
Q 027737 87 LKRKAINYQAANIVSSSIQPLQNLAVV---------------------------KY---------IEEKAGADERDIWAK 130 (219)
Q Consensus 87 ~~~~a~~~~~~~~~~~~~~~~~~~~~~---------------------------~~---------~~~~~~~~~~~~~~~ 130 (219)
..+++.++..+..+++.+... ...+. ++ +.....+....+.+.
T Consensus 101 E~qkadmra~vslVen~~t~a-El~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVi 179 (257)
T KOG3027|consen 101 EDQKADMRAYVSLVENLLTTA-ELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVI 179 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHH
Confidence 446777777777777654321 00000 00 000011223456677
Q ss_pred HHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCC-------CCCChHHHHHHHHHhC
Q 027737 131 THIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLD-------MTQFPLLLRLHEAYSK 201 (219)
Q Consensus 131 ~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~-------~~~~p~l~~~~~~~~~ 201 (219)
+++...++.|+..|+. .+|+.|++||- +|..+++-+..+. ..... ..+|++|.++.+|+.+
T Consensus 180 e~vdkc~~aLsa~L~~--q~yf~g~~P~e-------lDAlvFGHlytil-Tt~Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 180 EQVDKCCRALSAQLGS--QPYFTGDQPTE-------LDALVFGHLYTIL-TTRLPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHHHHHHhcC--CCccCCCCccH-------HHHHHHhhhHHhh-hhcCCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 8889999999999997 89999999999 9999999998883 33221 4789999999999986
No 93
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.13 E-value=2.1e-11 Score=83.69 Aligned_cols=68 Identities=25% Similarity=0.410 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCCC-CCChHHHHHHHHHhC
Q 027737 124 ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDM-TQFPLLLRLHEAYSK 201 (219)
Q Consensus 124 ~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~-~~~p~l~~~~~~~~~ 201 (219)
...+...+++.+.|..+|++|+.++++|++|++||+ ||+++++.+..+ . .. ++ +.+|+|.+|++||.+
T Consensus 31 ~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~-------AD~~v~~~l~~~-~-~~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 31 ASGDFSREELPKALKILEKHLAERGGDFLVGDKPTL-------ADIAVFGFLASL-R-WA-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--H-------HHHHHHHHHHHH-H-CC-HHTTTCHHHHHHHHHHHT
T ss_pred hhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCH-------HHHHHHHHHHHH-h-hc-ccccccHHHHHHHHhhcC
Confidence 456778888999999999999985555999999999 999999999777 3 33 33 589999999999974
No 94
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.06 E-value=2.5e-10 Score=72.97 Aligned_cols=65 Identities=31% Similarity=0.399 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCC---CCCChHHHHHHHH
Q 027737 124 ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLD---MTQFPLLLRLHEA 198 (219)
Q Consensus 124 ~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~---~~~~p~l~~~~~~ 198 (219)
...+...+++.+.|+.||++|.+ ++|++|+++|+ ||+++++.+.++ ...+.+ .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~s~-------aD~~l~~~l~~~-~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLAD--GPFLFGDRPSL-------ADIALAPFLWRL-RFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--SSBTTBSS--H-------HHHHHHHHHHHH-HHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh--CCCCCCCCCCH-------HHHHHHHHHHHH-HHhCcCcCccccCHHHHHHHhC
Confidence 34677888999999999999998 67999999999 999999999999 444432 4789999999987
No 95
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.06 E-value=3.5e-10 Score=78.14 Aligned_cols=101 Identities=21% Similarity=0.224 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccce
Q 027737 89 RKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQAD 168 (219)
Q Consensus 89 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD 168 (219)
++++++.+++.+++.......... ...+ ....+...+...+.+.+.++.||+.|.+.+++|++|+++|+ ||
T Consensus 2 e~~~v~~~~~~~~d~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~-------aD 72 (104)
T cd03192 2 EAARVDALVDTIADLRAEFAKYFY-EKDG-EEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTW-------AD 72 (104)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh-cCch-HHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccH-------HH
Confidence 467788888876654444333222 1100 01124556778888999999999999753468999999999 99
Q ss_pred EEehhHHHHHHhhcC-CC-CCCChHHHHHHHHH
Q 027737 169 LYLAPQLYAAVNRFN-LD-MTQFPLLLRLHEAY 199 (219)
Q Consensus 169 ~~l~~~l~~~~~~~~-~~-~~~~p~l~~~~~~~ 199 (219)
+++++.+.++ ...+ .. ...+|+|.+|++++
T Consensus 73 i~l~~~~~~~-~~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 73 LVVFDVLDYL-LYLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHH-HhhCchhhHHhChhHHHHHHhC
Confidence 9999999988 4443 33 67799999999875
No 96
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.02 E-value=1.8e-10 Score=78.42 Aligned_cols=96 Identities=22% Similarity=0.261 Sum_probs=68.0
Q ss_pred HHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehh
Q 027737 94 YQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAP 173 (219)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~ 173 (219)
++|+.++...+.+.+..............++..+...+++.+.++.||+.|++ ++|++|+++|+ ||+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~~~~~g~~~t~-------aDi~~~~ 72 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAG--RPYLAGDRFSL-------ADIALAP 72 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHcc--CCCCCCCCcCH-------HHHHHHH
Confidence 35666666655443332221111100113455677888899999999999987 78999999999 9999999
Q ss_pred HHHHHHhhcCCC---CCCChHHHHHHHHH
Q 027737 174 QLYAAVNRFNLD---MTQFPLLLRLHEAY 199 (219)
Q Consensus 174 ~l~~~~~~~~~~---~~~~p~l~~~~~~~ 199 (219)
.+.++ ...+.. .+.+|+|.+|++++
T Consensus 73 ~l~~~-~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 73 VLARL-DLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHH-HHhhhhhhhhccCccHHHHHHhC
Confidence 99998 444443 57799999999875
No 97
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.94 E-value=1.1e-07 Score=76.28 Aligned_cols=172 Identities=22% Similarity=0.208 Sum_probs=120.5
Q ss_pred CchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE-eCCeeeeehHHHHHHHHHhCCCCCCCCCC-H
Q 027737 10 SSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV-DGDFVVSDSFAILMYLEEKYPQPPLLPSD-L 87 (219)
Q Consensus 10 s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~-~~~~~l~es~aI~~yl~~~~~~~~l~p~~-~ 87 (219)
++-|.++.+.++.++-+.+++...- + -..|.|++|+|+ ++|+.+++-..|+.+|.....+-.+.+.. .
T Consensus 17 d~~sL~~l~y~kl~~~~l~v~~ssN-------~---~~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~ 86 (313)
T KOG3028|consen 17 DPDSLAALIYLKLAGAPLKVVVSSN-------P---WRSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSA 86 (313)
T ss_pred ChhHHHHHHHHHHhCCCceeEeecC-------C---CCCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHH
Confidence 7789999999999996665554431 1 245789999999 67799999999999999842222333332 5
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHH-----------HHHH------------------------HhcC-CcHHHHHHHH
Q 027737 88 KRKAINYQAANIVSSSIQPLQNLAVV-----------KYIE------------------------EKAG-ADERDIWAKT 131 (219)
Q Consensus 88 ~~~a~~~~~~~~~~~~~~~~~~~~~~-----------~~~~------------------------~~~~-~~~~~~~~~~ 131 (219)
.+.+....|+++++..+.+++..-+. .++. ...+ ..+..+.+..
T Consensus 87 kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~ 166 (313)
T KOG3028|consen 87 KQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYK 166 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHH
Confidence 56788888888888877665432211 0000 0000 1122344455
Q ss_pred HHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCC--C-----CCCChHHHHHHHHHhC
Q 027737 132 HIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNL--D-----MTQFPLLLRLHEAYSK 201 (219)
Q Consensus 132 ~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~--~-----~~~~p~l~~~~~~~~~ 201 (219)
...+.+..|.+.|.+ ++|++||++|- -|+.+++.+..+ ..... + +..++||.++.+++..
T Consensus 167 ~Aska~~~LS~~Lgs--~kffFgd~pss-------lDa~lfs~la~~-~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 167 DASKALNLLSTLLGS--KKFFFGDKPSS-------LDALLFSYLAIL-LQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHhcC--ceEeeCCCCch-------HHHHHHHHHHHH-HhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 567788889999988 89999999999 999999999985 33332 2 3458999999999986
No 98
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=98.92 E-value=2e-09 Score=77.03 Aligned_cols=68 Identities=15% Similarity=0.033 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCC-CCCChHHHHHHHHHhCC
Q 027737 126 DIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLD-MTQFPLLLRLHEAYSKL 202 (219)
Q Consensus 126 ~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~-~~~~p~l~~~~~~~~~~ 202 (219)
.+...+.+.+.|+.+|++|++ ++|++|+++|+ ||+++++.+.+.....+.+ .+.+|+|.+|++||.++
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~--~~fl~Gd~~t~-------AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKG--QPFLGGAAPNY-------ADYIVFGGFQWARIVSPFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcC--CCccCCCCCch-------hHHHHHHHHHHHHHcCcccccccCChHHHHHHHHhcC
Confidence 456778899999999999987 79999999999 9999999999883333555 57899999999999863
No 99
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=98.90 E-value=4.9e-09 Score=68.88 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=60.6
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
.++||+.+.||+|.+++.+|...|++|+.+.++-. ....++...++...+|++..||..+.++..|.+||+
T Consensus 9 ~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~---~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 9 SVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGND---ARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCC---hHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 36899999999999999999999999999887622 223456666778999999999999999999999984
No 100
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.88 E-value=1.1e-08 Score=66.13 Aligned_cols=57 Identities=23% Similarity=0.266 Sum_probs=49.3
Q ss_pred CchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHh
Q 027737 10 SSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEK 76 (219)
Q Consensus 10 s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~ 76 (219)
||+|.++.+.|..+|++|+.+... . -...|.|++|+|+++|..+.+|..|++||.++
T Consensus 16 sp~clk~~~~Lr~~~~~~~v~~~~-------n---~~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 16 DPECLAVLAYLKFAGAPLKVVPSN-------N---PWRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CHHHHHHHHHHHcCCCCEEEEecC-------C---CCCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 799999999999999999877443 1 13458999999999999999999999999875
No 101
>PRK10638 glutaredoxin 3; Provisional
Probab=98.87 E-value=6.8e-09 Score=68.85 Aligned_cols=72 Identities=13% Similarity=0.152 Sum_probs=61.5
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
+++|+.+.||+|++++.+|++.|++|+.+.++.. ....+++.+.++..++|++..+|..+.+...+..+-.+
T Consensus 4 v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~--~~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~~ 75 (83)
T PRK10638 4 VEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGD--AAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDAR 75 (83)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCcEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHHc
Confidence 7899999999999999999999999999988632 12346778889999999999999999998888776543
No 102
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.80 E-value=1.2e-08 Score=69.82 Aligned_cols=68 Identities=24% Similarity=0.156 Sum_probs=55.9
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhh-cCCC-CCCChHHHHHHH
Q 027737 120 AGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNR-FNLD-MTQFPLLLRLHE 197 (219)
Q Consensus 120 ~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~-~~~~-~~~~p~l~~~~~ 197 (219)
...++..+....++.+.|+.+|++|++ ++| +++|+ |||++++.+.+.... .+.. .+.+|+|.+|++
T Consensus 29 ~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~---d~~Tl-------ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~ 96 (98)
T cd03205 29 KRSQPWLERQRGKIERALDALEAELAK--LPL---DPLDL-------ADIAVACALGYLDFRHPDLDWRAAHPALAAWYA 96 (98)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHhhhh--CCC---CCCCH-------HHHHHHHHHHHHHhHccCcchhhhChHHHHHHH
Confidence 334566788899999999999999987 678 89999 999999999988322 3333 478999999999
Q ss_pred HH
Q 027737 198 AY 199 (219)
Q Consensus 198 ~~ 199 (219)
+|
T Consensus 97 rm 98 (98)
T cd03205 97 RF 98 (98)
T ss_pred hC
Confidence 85
No 103
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.78 E-value=9.9e-09 Score=68.74 Aligned_cols=64 Identities=22% Similarity=0.211 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhh-cCC-----CCCCChHHHHHHHHHh
Q 027737 128 WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNR-FNL-----DMTQFPLLLRLHEAYS 200 (219)
Q Consensus 128 ~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~-~~~-----~~~~~p~l~~~~~~~~ 200 (219)
...+++.+.++.+|+.|++ ++|++|+++|+ |||++++.+.++... .+. ..+.+|+|.+|++|+.
T Consensus 19 ~~~~~~~~~l~~le~~L~~--~~yl~Gd~~t~-------aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGD--KKFFFGDKPTS-------LDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCC--CCccCCCCCCH-------HHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 5667889999999999997 78999999999 999999999887321 221 2467999999999973
No 104
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.75 E-value=2.5e-08 Score=63.97 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=56.0
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeee--eehHHHHHHH
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVV--SDSFAILMYL 73 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l--~es~aI~~yl 73 (219)
|++||+...||.|++++.+|.+.|++|+.+.++- .....+++.+.++...+|++..+|..+ ++...|.++|
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~--~~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEK--DSAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHHCCCeEEEEeccC--CHHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 8999999999999999999999999998887752 112234567778899999999888877 5555555554
No 105
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.75 E-value=4.6e-08 Score=62.99 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=59.3
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
+++||....||+|.+++.+|...|++|+.+.++-.. ....+........+|++..||..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~---~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKDI---TGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCCh---hHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 478999999999999999999999999999886321 22344455667899999999999999999999974
No 106
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.72 E-value=2.6e-08 Score=72.54 Aligned_cols=65 Identities=15% Similarity=0.119 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhc-CC-CCCCChHHHHHHHHHhC
Q 027737 128 WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRF-NL-DMTQFPLLLRLHEAYSK 201 (219)
Q Consensus 128 ~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~-~~-~~~~~p~l~~~~~~~~~ 201 (219)
..++.+.+.++.+-+.+.. +++|+.|+++|+ ||+++++.+..+ ... ++ ++..+|++.+|++||.+
T Consensus 79 D~r~~L~~a~~~w~~~~~~-~~~FlaGd~ptI-------ADisvyg~l~s~-e~~~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 79 DVREWLYDALNTWVAALGK-DRQFHGGSKPNL-------ADLAVYGVLRSV-EGHPAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred hHHHHHHHHHHHHHHHhcC-CCCccCCCCCCH-------HHHHHHHHHHHH-HHhccccchhhCcCHHHHHHHHHH
Confidence 3455566666666565654 278999999999 999999999888 544 66 78899999999999986
No 107
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.62 E-value=1.5e-07 Score=64.80 Aligned_cols=113 Identities=22% Similarity=0.137 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccc
Q 027737 86 DLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYL 165 (219)
Q Consensus 86 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~ 165 (219)
|..+|++.++.-.|+.+.+.++-.-.-............-.+.....+.+.+...+..|.. +++||+| +.|+
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~-g~~~LFG-ewsI------ 72 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLAD-GGPNLFG-EWSI------ 72 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT---SSTTS-S--H------
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcc-CCCCccc-cchH------
Confidence 4678999999999999988775442222211111111122345556667778888887765 7899999 6999
Q ss_pred cceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHhhCC
Q 027737 166 QADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVP 210 (219)
Q Consensus 166 ~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~~~~ 210 (219)
||..+++++..+ ...|.+.. +.+..|.++.-++|++++++.
T Consensus 73 -AD~dlA~ml~Rl-~~~gd~vP--~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 73 -ADADLALMLNRL-VTYGDPVP--ERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp -HHHHHHHHHHHH-HTTT------HHHHHHHHHHHT-HHHHHHHH
T ss_pred -HHHHHHHHHHHH-HHcCCCCC--HHHHHHHHHHHCCHHHHHHHH
Confidence 999999999999 66666544 689999999999999998763
No 108
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.56 E-value=2e-07 Score=60.19 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=56.5
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILM 71 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~ 71 (219)
++||+.+.||+|++++.+|+..||+|+.+.+.- .....+++.++++...+|++..||..+.+-..+.+
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~--~~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEINIDI--FPERKAELEERTGSSVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEEECCC--CHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHh
Confidence 589999999999999999999999999998762 22335678888899999999999988877665544
No 109
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.55 E-value=6.5e-08 Score=69.35 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhh-c---CCC--CCCChHHHHHHH
Q 027737 124 ERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNR-F---NLD--MTQFPLLLRLHE 197 (219)
Q Consensus 124 ~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~-~---~~~--~~~~p~l~~~~~ 197 (219)
...+.......+.|+.|++.|.+ ++|++|+++|. +|+++++.+..+... . +.. ...+|||.+|++
T Consensus 53 ~~~ee~~~~~~~~l~aLs~~Lg~--~~~l~Gd~pT~-------~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~ 123 (126)
T cd03211 53 KTLDQVIEEVDQCCQALSQRLGT--QPYFFGDQPTE-------LDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCR 123 (126)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCcH-------HHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHH
Confidence 34567778889999999999998 89999999999 999999999887322 1 111 467999999999
Q ss_pred HHh
Q 027737 198 AYS 200 (219)
Q Consensus 198 ~~~ 200 (219)
||.
T Consensus 124 Ri~ 126 (126)
T cd03211 124 RIE 126 (126)
T ss_pred hcC
Confidence 973
No 110
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.53 E-value=9.9e-08 Score=69.38 Aligned_cols=68 Identities=15% Similarity=0.118 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHh-hcCC-----CCCCChHHHHHHHH
Q 027737 125 RDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVN-RFNL-----DMTQFPLLLRLHEA 198 (219)
Q Consensus 125 ~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~-~~~~-----~~~~~p~l~~~~~~ 198 (219)
..+...++..+.|+.||+.|.+ ++|++|+++|. +|+++++.+..+.. ..+. ...++|+|.+|++|
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~--~~~~~Gd~~t~-------~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~r 131 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGE--SQFFFGDTPTS-------LDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDR 131 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCC--CCcCCCCCCcH-------HHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHH
Confidence 4566777888999999999998 89999999999 99999999887732 2321 25789999999999
Q ss_pred HhC
Q 027737 199 YSK 201 (219)
Q Consensus 199 ~~~ 201 (219)
+.+
T Consensus 132 i~~ 134 (137)
T cd03212 132 ILS 134 (137)
T ss_pred HHH
Confidence 985
No 111
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.52 E-value=1.9e-07 Score=59.67 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=52.4
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeeh
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDS 66 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es 66 (219)
+++|+...|+.|.+++.+|.+.|++|+.+.++. .....+++.+.+|.+.+|++..+|..+.+.
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~--~~~~~~~~~~~~~~~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDERGIPFEEVDVDE--DPEALEELKKLNGYRSVPVVVIGDEHLSGF 64 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCC--CHHHHHHHHHHcCCcccCEEEECCEEEecC
Confidence 689999999999999999999999999888763 223346777888999999999888776653
No 112
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.46 E-value=4e-07 Score=59.99 Aligned_cols=61 Identities=16% Similarity=0.348 Sum_probs=47.4
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeee
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVS 64 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 64 (219)
+++||..+.||+|.+++.+|.+.||+|+.+.++-. ....+....++...+|+++.++..+.
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~---~~~~~~~~~~g~~~vPvv~i~~~~~~ 62 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVDRV---PEAAETLRAQGFRQLPVVIAGDLSWS 62 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCC---HHHHHHHHHcCCCCcCEEEECCEEEe
Confidence 47899999999999999999999999999988721 11122233467889999998776554
No 113
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.46 E-value=4.9e-07 Score=57.46 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=57.9
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMY 72 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~y 72 (219)
+++|+...||+|++++.+|...|++|+.+.+... .....++.+.++..++|++..+|..+.++..|.+.
T Consensus 2 v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~--~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 2 VVVFSKSTCPYCKRAKRLLESLGIEFEEIDILED--GELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCC--HHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 5799999999999999999999999998877622 22345667788899999999999999999888764
No 114
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.34 E-value=1.7e-06 Score=56.85 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=55.2
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHH
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMY 72 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~y 72 (219)
++++|..+.||+|.++.-+|...|++|+.+.++...++...+.....++..++|++..||..+.....+-++
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~~~ 73 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVGGCDDLDAL 73 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcCEEEECCEEEeCcccHHHH
Confidence 368999999999999999999999999999888543323234444555889999999888777655444443
No 115
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.33 E-value=7.5e-07 Score=57.72 Aligned_cols=64 Identities=13% Similarity=0.201 Sum_probs=50.7
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccC-CCCCCceEE-eCCeeeeehH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKIN-PIGYVPALV-DGDFVVSDSF 67 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~-p~~~vP~L~-~~~~~l~es~ 67 (219)
++||+...||.|++++.+|...|++|+.+.++ +.......+.+.| +...+|+++ ++|..+.++.
T Consensus 2 v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~--~~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~ 67 (77)
T TIGR02200 2 ITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIE--EDEGAADRVVSVNNGNMTVPTVKFADGSFLTNPS 67 (77)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCceEEEeCc--CCHhHHHHHHHHhCCCceeCEEEECCCeEecCCC
Confidence 68999999999999999999999999987765 2222345556666 889999997 6777777654
No 116
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.29 E-value=2.2e-06 Score=55.35 Aligned_cols=71 Identities=15% Similarity=0.212 Sum_probs=55.7
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCC-CCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIG-YVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~-~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
++||+.+.||+|.+++-+|...|++|+.+.++... ....++....... .+|++..+|..+.+...+.++..
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~--~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGDP--ALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCCH--HHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHHh
Confidence 57999999999999999999999999999887321 1123344444444 89999999999999888887654
No 117
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.22 E-value=3.7e-06 Score=54.96 Aligned_cols=72 Identities=15% Similarity=0.177 Sum_probs=58.5
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
+++|+.+.||+|.+++-+|+..|++|+.+.++... ....++.+.+....+|++..+|..+.+...+..+..+
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~--~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDP--ALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCH--HHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 57999999999999999999999999999887321 1234555666678999999999999888888776654
No 118
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.12 E-value=5.5e-06 Score=53.21 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=43.9
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCe
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDF 61 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~ 61 (219)
+++|+.+.||+|++++-+|.+.|++|+.+.++-.. ...+++ ...+...+|+++.+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~--~~~~~~-~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQP--EAIDYV-KAQGFRQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCCH--HHHHHH-HHcCCcccCEEEECCC
Confidence 58999999999999999999999999999886221 112233 3346678999997554
No 119
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.07 E-value=1.5e-05 Score=52.91 Aligned_cols=75 Identities=13% Similarity=0.160 Sum_probs=59.4
Q ss_pred eEEcccCCCchhHHHHHHHHH-----cCCcceEEEecCCCCCCCChhhhccCC--CCCCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNL-----KGLEYEYKAVNLVKGEQFSPDFLKINP--IGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p--~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
+++|+.+.||+|.+++-+|.. .|++|+.+.++-.. ...+++..... ...+|++..||..+.+...|.+++.
T Consensus 3 v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~--~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~~~ 80 (85)
T PRK11200 3 VVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEG--ISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAYVK 80 (85)
T ss_pred EEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCCh--HHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHHHH
Confidence 579999999999999999999 89999998887321 11233433332 3689999999999999999999998
Q ss_pred HhCC
Q 027737 75 EKYP 78 (219)
Q Consensus 75 ~~~~ 78 (219)
..++
T Consensus 81 ~~~~ 84 (85)
T PRK11200 81 ENLG 84 (85)
T ss_pred Hhcc
Confidence 8764
No 120
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.02 E-value=5.1e-06 Score=51.31 Aligned_cols=60 Identities=13% Similarity=0.201 Sum_probs=48.7
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVV 63 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l 63 (219)
+++|+.+.||+|.+++-+|...|++|+.+.++... ....++.+.+....+|++..||..+
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~--~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDE--EAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSH--HHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccch--hHHHHHHHHcCCCccCEEEECCEEC
Confidence 47999999999999999999999999999998432 2344555666778999999888654
No 121
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.00 E-value=2.3e-05 Score=51.39 Aligned_cols=74 Identities=11% Similarity=0.114 Sum_probs=59.4
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCC-CCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKG-EQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
+++|+...||+|.+++-+|...+++|+.+.++.... ......+.+.+....+|++..+|..+.++..|..+..+
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 478999999999999999999999999998885432 11122345666678999999999999999999887764
No 122
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=97.92 E-value=5.1e-05 Score=50.48 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=57.1
Q ss_pred eEEcccCCCchhHHHHHHHHHcC-----CcceEEEecCCCCCCCChhhhccCC--CCCCceEEeCCeeeeehHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKG-----LEYEYKAVNLVKGEQFSPDFLKINP--IGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~g-----i~~~~~~v~~~~~~~~~~~~~~~~p--~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
+++|+.+.||+|.+++-+|...+ ++|+.+.++-. + ....++..... ...||++..||..+-++..|..++.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~-~-~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~ 79 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAE-G-ISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVK 79 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCC-H-HHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHH
Confidence 68999999999999999999985 56777666521 1 11233443333 2689999999999999999999998
Q ss_pred HhCC
Q 027737 75 EKYP 78 (219)
Q Consensus 75 ~~~~ 78 (219)
+.++
T Consensus 80 ~~~~ 83 (86)
T TIGR02183 80 ENFD 83 (86)
T ss_pred hccc
Confidence 8754
No 123
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.86 E-value=4.5e-05 Score=52.18 Aligned_cols=72 Identities=15% Similarity=0.149 Sum_probs=55.7
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCC-CCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKG-EQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYL 73 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl 73 (219)
+++|..+.||+|.+++-+|...|++|+.+.++-.+. ......+...+....+|++..+|..+.+...+....
T Consensus 10 Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 10 VVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHHH
Confidence 579999999999999999999999999998873221 001123455567789999999999888877776643
No 124
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.79 E-value=0.00011 Score=47.12 Aligned_cols=55 Identities=31% Similarity=0.409 Sum_probs=47.5
Q ss_pred CCchhHHHHHHHHHcCCc---ceEEEecCCCCCCCChhhhccCCCCCCceEEe-CCeeeeehHHHHHHH
Q 027737 9 RSSCSHRVRIGLNLKGLE---YEYKAVNLVKGEQFSPDFLKINPIGYVPALVD-GDFVVSDSFAILMYL 73 (219)
Q Consensus 9 ~s~~~~~vr~~l~~~gi~---~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~-~~~~l~es~aI~~yl 73 (219)
.++.|.++.+.|+.++.+ |+.+..+ .+ .++|.+++|+|.+ +++.+++-..|++||
T Consensus 13 id~ecLa~~~yl~~~~~~~~~~~vv~s~-------n~---~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 13 IDPECLAVIAYLKFAGAPEQQFKVVPSN-------NP---WLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred cCHHHHHHHHHHHhCCCCCceEEEEEcC-------CC---CcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 478999999999999999 7777654 11 3678999999998 999999999999998
No 125
>PHA03050 glutaredoxin; Provisional
Probab=97.71 E-value=0.00012 Score=50.95 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=55.0
Q ss_pred eEEcccCCCchhHHHHHHHHHcCC---cceEEEecCCC-CCCCChhhhccCCCCCCceEEeCCeeeeehHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGL---EYEYKAVNLVK-GEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILM 71 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi---~~~~~~v~~~~-~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~ 71 (219)
+++|..+.||+|.+++-+|...|+ +|+.+.++-.. +.....++.+.+....||.+..+|..+-+...+..
T Consensus 15 V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 15 VTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 578999999999999999999999 78888887211 11123556677777899999999998887776666
No 126
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.63 E-value=0.00019 Score=47.09 Aligned_cols=74 Identities=12% Similarity=0.143 Sum_probs=57.6
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCc--ceEEEecCCCCC-CCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLE--YEYKAVNLVKGE-QFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~--~~~~~v~~~~~~-~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
+++|+.+.||+|.+++-+|...+++ |+.+.++..+.. .....+........+|++..+|..+.++..+.++..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4689999999999999999999999 888888743211 1112345556677899999999999999888887654
No 127
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.54 E-value=0.0003 Score=47.94 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=50.1
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
+.||+|.+++-+|...|++|+.+.+. +......++...+....+|.+..+|..+-+...+.....
T Consensus 25 ~~Cp~C~~ak~lL~~~~i~~~~~di~--~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l~~ 89 (97)
T TIGR00365 25 PQCGFSARAVQILKACGVPFAYVNVL--EDPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEMYQ 89 (97)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEECC--CCHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHHHH
Confidence 78999999999999999999988775 222223445566667799999999998887777766443
No 128
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.47 E-value=0.00045 Score=46.33 Aligned_cols=65 Identities=17% Similarity=0.072 Sum_probs=51.1
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
+.||+|.+++-+|...|++|+.+.+.-. .....++.+.+...++|++..+|..+-+...+.....
T Consensus 21 ~~Cp~C~~ak~~L~~~~i~y~~idv~~~--~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~~ 85 (90)
T cd03028 21 PRCGFSRKVVQILNQLGVDFGTFDILED--EEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMHE 85 (90)
T ss_pred CCCcHHHHHHHHHHHcCCCeEEEEcCCC--HHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHHH
Confidence 5899999999999999999999988622 2223455566667799999999999888877777443
No 129
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.18 E-value=0.00069 Score=48.63 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhH
Q 027737 126 DIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 205 (219)
Q Consensus 126 ~~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 205 (219)
.....++++..|..||..+.. +-.++.++|+ -||.+++.|+.+...-|..+. |++.+|+++|++.-.+
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~---~~~~n~~LS~-------dDi~lFp~LR~Ltivkgi~~P--~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLAS---PNAVNGELSI-------DDIILFPILRSLTIVKGIQWP--PKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SC---TTBTTSS--H-------HHHHHHHHHHHHCTCTTS-----HHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHHHHHhcc---ccccCCCCCH-------HHHHHHHHHhhhhhccCCcCC--HHHHHHHHHHHHHcCC
Confidence 356778889999999998875 4445559999 999999999999444455444 8999999999976544
No 130
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.03 E-value=0.00075 Score=48.04 Aligned_cols=67 Identities=18% Similarity=0.113 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhH
Q 027737 127 IWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 205 (219)
Q Consensus 127 ~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~ 205 (219)
....++++..|..++..+.. +-.++.++|+ -||.+++.|..+...-|..++ |++.+|+++|++.-.+
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~---~~~~n~~ls~-------DDi~lFp~LR~Lt~vkgi~~P--~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 59 PQYIAALNALLEELDPLILS---SEAVNGQLST-------DDIILFPILRNLTLVKGLVFP--PKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcC---ccccCCcCCH-------HHHHHHHHHhhhhhhcCCCCC--HHHHHHHHHHHHHhCC
Confidence 45677889999999998854 3345678999 999999999999555556554 7999999999976543
No 131
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.99 E-value=0.00099 Score=46.81 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=31.5
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
|+++|+.+.|+.|++++-+|+..|++|+.+.+.
T Consensus 1 mi~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 1 MIKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 899999999999999999999999999998875
No 132
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.95 E-value=0.0011 Score=47.71 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=31.6
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
|+++|+.+.|+.|++++-+|...||+|+.+.+.
T Consensus 1 mi~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 1 MVTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 899999999999999999999999999999875
No 133
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=96.86 E-value=0.0035 Score=45.99 Aligned_cols=71 Identities=13% Similarity=0.132 Sum_probs=54.3
Q ss_pred eEEcccC------CCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCC----CCCCceEEeCCeeeeehHHHHH
Q 027737 2 LKLFSYW------RSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINP----IGYVPALVDGDFVVSDSFAILM 71 (219)
Q Consensus 2 ~~L~~~~------~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p----~~~vP~L~~~~~~l~es~aI~~ 71 (219)
++||... .+|+|.+++-+|+..||+|+.+.+++.. ...+++.+... ...+|.+..+|..+-+...+.+
T Consensus 2 VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~--~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 2 VVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDS--GFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred EEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCH--HHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHH
Confidence 4688877 7999999999999999999999887432 22334444433 3689999999999988877777
Q ss_pred HHH
Q 027737 72 YLE 74 (219)
Q Consensus 72 yl~ 74 (219)
..+
T Consensus 80 L~e 82 (147)
T cd03031 80 LNE 82 (147)
T ss_pred HHH
Confidence 443
No 134
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=96.84 E-value=0.03 Score=48.17 Aligned_cols=67 Identities=9% Similarity=0.191 Sum_probs=52.4
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhh---------ccCCCCCCceEEeCCeeeeehHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFL---------KINPIGYVPALVDGDFVVSDSFAILM 71 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~---------~~~p~~~vP~L~~~~~~l~es~aI~~ 71 (219)
+++|+.+.||+|.++.-+|...||+|+.+.++ +.. ...++. .......||++..||..+.+-..+..
T Consensus 4 V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~--~~~-~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l~~ 79 (410)
T PRK12759 4 VRIYTKTNCPFCDLAKSWFGANDIPFTQISLD--DDV-KRAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNLMA 79 (410)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCeEEEECC--CCh-hHHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHHHH
Confidence 68999999999999999999999999999887 211 111221 22456789999999999988887765
No 135
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=96.70 E-value=0.0023 Score=46.09 Aligned_cols=33 Identities=18% Similarity=0.394 Sum_probs=31.7
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
|+++|+.+.|+.|++++-+|...||+|+++.+.
T Consensus 1 Mi~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 1 MIKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 899999999999999999999999999999886
No 136
>PRK12559 transcriptional regulator Spx; Provisional
Probab=96.65 E-value=0.0028 Score=45.62 Aligned_cols=33 Identities=15% Similarity=0.286 Sum_probs=31.7
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
|+++|+.+.|+.|++++-+|...|++|+.+.+.
T Consensus 1 mi~iY~~~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 1 MVVLYTTASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCeEEEEee
Confidence 899999999999999999999999999999876
No 137
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=96.51 E-value=0.011 Score=36.94 Aligned_cols=57 Identities=18% Similarity=0.096 Sum_probs=40.6
Q ss_pred eEEcccCCCchhHHHHHHHHHc-----CCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLK-----GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVS 64 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~-----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 64 (219)
+++|+.+.||+|.++.-+|++. ++++..+.++ + ..++........+|++..+|..++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~--~----~~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 3 IEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDAA--E----FPDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcc--c----CHhHHHHcCCcccCEEEECCEEEE
Confidence 6899999999999999999875 4666555543 1 233444444567999997776654
No 138
>PRK10853 putative reductase; Provisional
Probab=96.47 E-value=0.004 Score=43.95 Aligned_cols=33 Identities=18% Similarity=0.424 Sum_probs=31.4
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
|+++|+.+.|.-|++++-+|++.|++|+++.+.
T Consensus 1 Mi~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 1 MVTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 899999999999999999999999999988775
No 139
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=96.38 E-value=0.0049 Score=43.41 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=31.1
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
|+++|+.+.|.-|++++-.|+..||+|+++.+.
T Consensus 2 ~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 2 MITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 799999999999999999999999999988775
No 140
>PRK10824 glutaredoxin-4; Provisional
Probab=96.17 E-value=0.014 Score=40.88 Aligned_cols=65 Identities=12% Similarity=0.077 Sum_probs=50.3
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHH
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLE 74 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~ 74 (219)
+.||+|.++.-+|...|++|+.+.+.-. ......+...+-..++|-+..+|..+-+...+.....
T Consensus 28 p~Cpyc~~ak~lL~~~~i~~~~idi~~d--~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l~~ 92 (115)
T PRK10824 28 PSCGFSAQAVQALSACGERFAYVDILQN--PDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQ 92 (115)
T ss_pred CCCchHHHHHHHHHHcCCCceEEEecCC--HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHHHH
Confidence 4799999999999999999998877521 1223455566667899999999999988777766443
No 141
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.15 E-value=0.0063 Score=42.45 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=30.2
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
++||+.+.|++|++++-+|+..|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIV 32 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEeccc
Confidence 58999999999999999999999999999876
No 142
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.05 E-value=0.0085 Score=41.24 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=30.1
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
+++|+.+.|+.|++++-+|+..|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 58999999999999999999999999998885
No 143
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=95.64 E-value=0.04 Score=35.03 Aligned_cols=64 Identities=23% Similarity=0.209 Sum_probs=46.3
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCC--------CCCChhhh--ccCCCCCCceEE-eCCeeee
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKG--------EQFSPDFL--KINPIGYVPALV-DGDFVVS 64 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~--------~~~~~~~~--~~~p~~~vP~L~-~~~~~l~ 64 (219)
|-+||+...||-|..+.-.|+-.+++|+.+.+.-.-. ..+.++|- +.|..-.+|+|. +||.++.
T Consensus 3 kp~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 3 KPKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred CceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 3479999999999999999999999999998863211 11233333 334445689998 7777766
No 144
>PRK10026 arsenate reductase; Provisional
Probab=95.52 E-value=0.018 Score=41.88 Aligned_cols=33 Identities=9% Similarity=-0.055 Sum_probs=30.9
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
|+++|+.+.|.-|++++-+|++.|++|+++.+.
T Consensus 3 ~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 3 NITIYHNPACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred EEEEEeCCCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 489999999999999999999999999998875
No 145
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=95.44 E-value=0.02 Score=40.28 Aligned_cols=32 Identities=19% Similarity=0.447 Sum_probs=29.8
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
+++|+.+.|+.|++++-+|...|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 58999999999999999999999999988875
No 146
>PTZ00062 glutaredoxin; Provisional
Probab=95.34 E-value=0.052 Score=42.09 Aligned_cols=63 Identities=16% Similarity=0.065 Sum_probs=48.2
Q ss_pred CCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHH
Q 027737 8 WRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMY 72 (219)
Q Consensus 8 ~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~y 72 (219)
+.||+|+++.-+|...||+|+...+. +.+.....+...+....+|.+..+|..+-+...+.+.
T Consensus 126 p~C~~C~~~k~~L~~~~i~y~~~DI~--~d~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~l 188 (204)
T PTZ00062 126 PFCRFSNAVVNMLNSSGVKYETYNIF--EDPDLREELKVYSNWPTYPQLYVNGELIGGHDIIKEL 188 (204)
T ss_pred CCChhHHHHHHHHHHcCCCEEEEEcC--CCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 57999999999999999999988776 2222234455666667899999999888777666653
No 147
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.32 E-value=0.024 Score=39.10 Aligned_cols=32 Identities=16% Similarity=0.384 Sum_probs=30.1
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
+++|+.+.|+.|++++-+|.+.|++|+++.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 58999999999999999999999999998876
No 148
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.23 E-value=0.027 Score=39.44 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=30.2
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
++||+.+.|+.|++++-+|++.|++|+++.+.
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 68999999999999999999999999998875
No 149
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=95.14 E-value=0.0081 Score=52.25 Aligned_cols=113 Identities=13% Similarity=0.104 Sum_probs=74.7
Q ss_pred eCCeeeeehHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 027737 58 DGDFVVSDSFAILMYLEEKYP-QPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKG 136 (219)
Q Consensus 58 ~~~~~l~es~aI~~yl~~~~~-~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 136 (219)
-+|..+.++..+..|.+.... ...+++.+ .++.+++.|+++.... .-.++...
T Consensus 43 ~d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~~-------------------------~~~~~s~~ 96 (712)
T KOG1147|consen 43 LDGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSSTF-------------------------SFDEISSS 96 (712)
T ss_pred cccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhhc-------------------------chHHHHHH
Confidence 346666667777777664432 34477776 7889999999986541 11336677
Q ss_pred HHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCC--CCCCChHHHHHHHHHhCChhH
Q 027737 137 FAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNL--DMTQFPLLLRLHEAYSKLPAF 205 (219)
Q Consensus 137 l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~--~~~~~p~l~~~~~~~~~~p~~ 205 (219)
+..++..|.- ..|++|.++|+ ||+++|+++..--...+. ....+-++.+|+.-....++.
T Consensus 97 ~~~ld~~l~~--~t~lvg~sls~-------Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~ 158 (712)
T KOG1147|consen 97 LSELDKFLVL--RTFLVGNSLSI-------ADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAH 158 (712)
T ss_pred HHHHHhhhhH--HHHhhccchhH-------HHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHH
Confidence 7888888887 79999999999 999999999753111111 123456778888733333333
No 150
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=94.96 E-value=0.12 Score=35.55 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=55.5
Q ss_pred EEcccCCCchhHHHHHHHHHcCCcceEEEecCCCC-CCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKG-EQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
.+|.-..||+|+++.-+|...|+++..++++-... ..-...+.+..-..++|.+..+|..+-+...+..+-.+
T Consensus 17 VifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 17 VIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALHKS 90 (104)
T ss_pred EEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHHHc
Confidence 45666789999999999999999999999985431 12223334455556999999999999888888876553
No 151
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=94.56 E-value=0.053 Score=38.69 Aligned_cols=32 Identities=13% Similarity=0.198 Sum_probs=30.1
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
+++|+.+.|.-|++++-+|++.|++|+++.+.
T Consensus 3 i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 3 IIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 68999999999999999999999999998875
No 152
>PHA02125 thioredoxin-like protein
Probab=94.48 E-value=0.13 Score=32.89 Aligned_cols=52 Identities=25% Similarity=0.284 Sum_probs=38.8
Q ss_pred CeEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEe
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVD 58 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~ 58 (219)
|+.+|+.++|+.|..+.-.|+. +.++...++.. ...++.+......+|++.+
T Consensus 1 ~iv~f~a~wC~~Ck~~~~~l~~--~~~~~~~vd~~----~~~~l~~~~~v~~~PT~~~ 52 (75)
T PHA02125 1 MIYLFGAEWCANCKMVKPMLAN--VEYTYVDVDTD----EGVELTAKHHIRSLPTLVN 52 (75)
T ss_pred CEEEEECCCCHhHHHHHHHHHH--HhheEEeeeCC----CCHHHHHHcCCceeCeEEC
Confidence 8899999999999999888864 56666666632 2345556666778999993
No 153
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=94.20 E-value=0.2 Score=33.64 Aligned_cols=68 Identities=18% Similarity=0.120 Sum_probs=48.1
Q ss_pred eEEcccCCCc------hhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccC----CCCCCceEEeCCeeeeehHHHHH
Q 027737 2 LKLFSYWRSS------CSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKIN----PIGYVPALVDGDFVVSDSFAILM 71 (219)
Q Consensus 2 ~~L~~~~~s~------~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~----p~~~vP~L~~~~~~l~es~aI~~ 71 (219)
+++|+...++ .|++++.+|.-+||+|+.+.++... ....+..+.. +...+|-+..++..+-+.-.+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~--~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNE--ENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCH--HHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 5677666655 6778899999999999999998532 2233444443 34788988888888877655544
No 154
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=93.87 E-value=0.082 Score=36.99 Aligned_cols=32 Identities=25% Similarity=0.142 Sum_probs=29.8
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
+++|+.+.|.-|++++-.|+..|++|+++.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999988765
No 155
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=93.86 E-value=0.083 Score=36.83 Aligned_cols=32 Identities=22% Similarity=0.136 Sum_probs=29.7
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
+++|+.+.|.-|++++-.|+..|++|+++.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999988764
No 156
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=93.04 E-value=0.35 Score=32.70 Aligned_cols=67 Identities=12% Similarity=0.093 Sum_probs=48.7
Q ss_pred cCCCchhHHHHHHHHHcC-CcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 7 YWRSSCSHRVRIGLNLKG-LEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 7 ~~~s~~~~~vr~~l~~~g-i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
+|.|+||.++--+|..+| ++|..+.|-- .+.-+..+.+.+-..++|-|-.+|.-+-+|-.|.+...+
T Consensus 27 ~P~CGFS~~~vqiL~~~g~v~~~~vnVL~--d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~Em~q~ 94 (105)
T COG0278 27 FPQCGFSAQAVQILSACGVVDFAYVDVLQ--DPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVREMYQS 94 (105)
T ss_pred CCCCCccHHHHHHHHHcCCcceeEEeecc--CHHHHhccHhhcCCCCCceeeECCEEeccHHHHHHHHHc
Confidence 577999999999999999 6776666641 112233344555568999999999998888777776543
No 157
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=92.98 E-value=0.77 Score=29.39 Aligned_cols=54 Identities=11% Similarity=0.183 Sum_probs=38.0
Q ss_pred EEcccCCCchhHHH----HHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeee
Q 027737 3 KLFSYWRSSCSHRV----RIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVS 64 (219)
Q Consensus 3 ~L~~~~~s~~~~~v----r~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 64 (219)
.+| .++||.|..+ .-++.+.|++++++.++- .++..+ .-...+|++.-||..+.
T Consensus 4 ~~~-a~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~------~~~a~~-~~v~~vPti~i~G~~~~ 61 (76)
T TIGR00412 4 QIY-GTGCANCQMTEKNVKKAVEELGIDAEFEKVTD------MNEILE-AGVTATPGVAVDGELVI 61 (76)
T ss_pred EEE-CCCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC------HHHHHH-cCCCcCCEEEECCEEEE
Confidence 455 5999999988 668888899999888861 122222 34678999997775554
No 158
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=92.64 E-value=0.52 Score=30.15 Aligned_cols=57 Identities=19% Similarity=0.145 Sum_probs=39.3
Q ss_pred CeEEcccCCCchhHHHHHHHHH----cCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCe
Q 027737 1 MLKLFSYWRSSCSHRVRIGLNL----KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDF 61 (219)
Q Consensus 1 m~~L~~~~~s~~~~~vr~~l~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~ 61 (219)
++++|+.++|+.|..+.-.|+. .+..+....++... ..+.........+|++..+|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVME----NPQKAMEYGIMAVPAIVINGD 62 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCcc----CHHHHHHcCCccCCEEEECCE
Confidence 5789999999999988888764 35445666666432 334444455678999996664
No 159
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=92.56 E-value=0.49 Score=31.44 Aligned_cols=57 Identities=19% Similarity=0.125 Sum_probs=40.1
Q ss_pred eEEcccCCCchhHHHHHHHHHc-----CCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLK-----GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVS 64 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~-----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 64 (219)
+++|..+.|++|..+.-++++. ++.++.+.++ ..++.........+|+++.||..+.
T Consensus 16 i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~------~~~e~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 16 FETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGA------LFQDEVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhH------hCHHHHHHcCCccCCEEEECCEEEE
Confidence 4688889999999988877765 5666655554 2344445555778999997776554
No 160
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=90.09 E-value=1.7 Score=28.20 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=39.2
Q ss_pred eEEcccCCCchhHHHHHHHHHcC--CcceEEEecCCCCCCCChhhhccCCCCCCceEEeCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKG--LEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGD 60 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~g--i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~ 60 (219)
++||+-+.|+.|..+.-.|.... .+++...++..+ .+++....- ..||||..+|
T Consensus 2 l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~----d~~l~~~Y~-~~IPVl~~~~ 57 (81)
T PF05768_consen 2 LTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDE----DPELFEKYG-YRIPVLHIDG 57 (81)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTT----THHHHHHSC-TSTSEEEETT
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCC----CHHHHHHhc-CCCCEEEEcC
Confidence 58999999999999999999754 456677777543 444554442 5899999655
No 161
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=87.69 E-value=1.4 Score=25.51 Aligned_cols=53 Identities=30% Similarity=0.261 Sum_probs=34.6
Q ss_pred eEEcccCCCchhHHHHHHHH-----HcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE
Q 027737 2 LKLFSYWRSSCSHRVRIGLN-----LKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV 57 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~-----~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 57 (219)
+.+|+...|+.|.+++..+. ..++.+..+.++... . .......++...+|+++
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~P~~~ 58 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDP--A-LEKELKRYGVGGVPTLV 58 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCCh--H-HhhHHHhCCCccccEEE
Confidence 35677888999999999999 445555555554221 1 11112356778999998
No 162
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=86.55 E-value=3.8 Score=26.05 Aligned_cols=56 Identities=21% Similarity=0.083 Sum_probs=35.9
Q ss_pred EEcccCCCchhHHHHHH----HHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeeh
Q 027737 3 KLFSYWRSSCSHRVRIG----LNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDS 66 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~----l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es 66 (219)
+++ .+.|++|..+.-+ +...|+.++.+.+. ..++. ...-...+|+++-||...+..
T Consensus 4 ~v~-~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~~------~~~~~-~~ygv~~vPalvIng~~~~~G 63 (76)
T PF13192_consen 4 KVF-SPGCPYCPELVQLLKEAAEELGIEVEIIDIE------DFEEI-EKYGVMSVPALVINGKVVFVG 63 (76)
T ss_dssp EEE-CSSCTTHHHHHHHHHHHHHHTTEEEEEEETT------THHHH-HHTT-SSSSEEEETTEEEEES
T ss_pred EEe-CCCCCCcHHHHHHHHHHHHhcCCeEEEEEcc------CHHHH-HHcCCCCCCEEEECCEEEEEe
Confidence 454 5679999966664 44567777666642 13333 455578999999877765543
No 163
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=85.35 E-value=0.88 Score=31.42 Aligned_cols=29 Identities=21% Similarity=0.301 Sum_probs=22.8
Q ss_pred cccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 5 FSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 5 ~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
|+.+.|.-|++++-+|++.|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78899999999999999999999988764
No 164
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=82.71 E-value=1.8 Score=30.01 Aligned_cols=67 Identities=16% Similarity=0.170 Sum_probs=42.4
Q ss_pred CCchhHHHHHHHHHc---CCcceEEEecCCCCCCCChhhhcc-C-CCCCCceEE-eCCe-------------eeeehHHH
Q 027737 9 RSSCSHRVRIGLNLK---GLEYEYKAVNLVKGEQFSPDFLKI-N-PIGYVPALV-DGDF-------------VVSDSFAI 69 (219)
Q Consensus 9 ~s~~~~~vr~~l~~~---gi~~~~~~v~~~~~~~~~~~~~~~-~-p~~~vP~L~-~~~~-------------~l~es~aI 69 (219)
.||.|..+.=+|... .-..+.+.|+... ...+..+. . ..+.+|+|+ .+|. .+.++..|
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~R---PR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I 99 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFPR---PRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRI 99 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCCC---chHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHH
Confidence 477777776666553 2234555555433 12333322 1 246789999 4443 79999999
Q ss_pred HHHHHHhCC
Q 027737 70 LMYLEEKYP 78 (219)
Q Consensus 70 ~~yl~~~~~ 78 (219)
++||+++|+
T Consensus 100 ~~~La~r~g 108 (112)
T PF11287_consen 100 LRYLAERHG 108 (112)
T ss_pred HHHHHHHcC
Confidence 999999987
No 165
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=78.57 E-value=1.4 Score=30.95 Aligned_cols=27 Identities=26% Similarity=0.407 Sum_probs=13.5
Q ss_pred CCceEE--eCCeeeeehHHHHHHHHHhCC
Q 027737 52 YVPALV--DGDFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 52 ~vP~L~--~~~~~l~es~aI~~yl~~~~~ 78 (219)
.-|-|. .+|+.++|+.||++|+.+-|-
T Consensus 35 ~~~~L~~~~~gF~L~e~NAIvrYl~nDF~ 63 (122)
T PF09635_consen 35 SGPLLKDKKSGFELFEPNAIVRYLANDFE 63 (122)
T ss_dssp -S--EEE-S--S----HHHHHHHHTT--T
T ss_pred ccceeeecCCceEEecccHHHHHHHhhcC
Confidence 346774 578999999999999999864
No 166
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=76.21 E-value=16 Score=22.92 Aligned_cols=55 Identities=9% Similarity=0.081 Sum_probs=35.3
Q ss_pred eEEcccCCCchhHHHHHHHHH-----cCCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNL-----KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFV 62 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~ 62 (219)
+..|+.+.|+.|+...-.+.. .++.+-.+.++ . ...+........+|++. .+|..
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~--~----~~~~~~~~~v~~~P~~~~~~~g~~ 75 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVKVDVD--E----NPELAEEYGVRSIPTFLFFKNGKE 75 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEEEECC--C----ChhHHHhcCcccccEEEEEECCEE
Confidence 456677889999988888877 55555444433 1 34444445567789887 56653
No 167
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=74.90 E-value=7.1 Score=26.54 Aligned_cols=67 Identities=18% Similarity=0.149 Sum_probs=35.8
Q ss_pred eEEcccCCCc------hhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhcc---------CCCCCCceEEeCCeeeeeh
Q 027737 2 LKLFSYWRSS------CSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKI---------NPIGYVPALVDGDFVVSDS 66 (219)
Q Consensus 2 ~~L~~~~~s~------~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~---------~p~~~vP~L~~~~~~l~es 66 (219)
+++|....++ ..+++..+|+.++|+|+.+.+...+ ......++. ++....|-+..|+..+-+-
T Consensus 3 I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e--~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gdy 80 (99)
T PF04908_consen 3 IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDE--EARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGDY 80 (99)
T ss_dssp EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-H--HHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEEH
T ss_pred EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCH--HHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEeeH
Confidence 4677666555 4669999999999999988887422 112222222 2233456777676655544
Q ss_pred HHHH
Q 027737 67 FAIL 70 (219)
Q Consensus 67 ~aI~ 70 (219)
-.+-
T Consensus 81 e~f~ 84 (99)
T PF04908_consen 81 EDFE 84 (99)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 168
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=72.83 E-value=13 Score=24.61 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=35.3
Q ss_pred eEEcccCCCchhHHHHHHHHH----cCCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNL----KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVV 63 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 63 (219)
+.+|+.++|+.|+...-.+.. .+-.+....++.. ..+++....-...+|++. .+|.++
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d----~~~~l~~~~~v~~vPt~~i~~~g~~v 80 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDID----EDQEIAEAAGIMGTPTVQFFKDKELV 80 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECC----CCHHHHHHCCCeeccEEEEEECCeEE
Confidence 456778899999988766654 1213445555532 234444444457889887 666654
No 169
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=72.38 E-value=2.2 Score=32.06 Aligned_cols=39 Identities=23% Similarity=0.233 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhcC-CCCeeeccc-ccccccccccceEEehhHHHHH
Q 027737 133 IGKGFAALEKLLKDY-AGKYATGDE-VFLYYICYLQADLYLAPQLYAA 178 (219)
Q Consensus 133 l~~~l~~le~~L~~~-~~~fl~G~~-~s~~~~~~~~aD~~l~~~l~~~ 178 (219)
-.+.+..|++.|+.. ..+|++|+. +|- .||.+++-|.-+
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~pss-------lD~L~~ayL~l~ 153 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSS-------LDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCH-------HHHHHHHHHHHH
Confidence 467889999999872 138899887 999 999999998866
No 170
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=72.21 E-value=8 Score=30.31 Aligned_cols=67 Identities=12% Similarity=0.003 Sum_probs=50.2
Q ss_pred cCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHH
Q 027737 7 YWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 7 ~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
.+.|++++.+.-+|...|++|+...|--. +.-+..+++.+--.+.|-|-.+|.-+-+.-.|.+.+.+
T Consensus 151 ~P~CGFS~~~v~iL~~~nV~~~~fdIL~D--eelRqglK~fSdWPTfPQlyI~GEFiGGlDIl~~m~~~ 217 (227)
T KOG0911|consen 151 EPKCGFSRQLVGILQSHNVNYTIFDVLTD--EELRQGLKEFSDWPTFPQLYVKGEFIGGLDILKEMHEK 217 (227)
T ss_pred cccccccHHHHHHHHHcCCCeeEEeccCC--HHHHHHhhhhcCCCCccceeECCEeccCcHHHHHHhhc
Confidence 56799999999999999999998888622 11223344556668999999999888877777765543
No 171
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=71.77 E-value=18 Score=24.95 Aligned_cols=58 Identities=14% Similarity=0.056 Sum_probs=38.2
Q ss_pred EEcccCCCchhHHHHHHHHH-----cCCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeeeeeh
Q 027737 3 KLFSYWRSSCSHRVRIGLNL-----KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVVSDS 66 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~es 66 (219)
..|+.++|+.|+.+.-.+++ .++ ....++.. ...++.+......+|++. .+|..+...
T Consensus 27 V~f~a~~c~~C~~~~p~l~~la~~~~~i--~f~~Vd~~----~~~~l~~~~~v~~vPt~l~fk~G~~v~~~ 91 (113)
T cd02989 27 CHFYHPEFFRCKIMDKHLEILAKKHLET--KFIKVNAE----KAPFLVEKLNIKVLPTVILFKNGKTVDRI 91 (113)
T ss_pred EEEECCCCccHHHHHHHHHHHHHHcCCC--EEEEEEcc----cCHHHHHHCCCccCCEEEEEECCEEEEEE
Confidence 35667889999988777655 244 44555532 234555656678899998 788766543
No 172
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=68.86 E-value=8.4 Score=25.79 Aligned_cols=55 Identities=13% Similarity=-0.019 Sum_probs=32.2
Q ss_pred eEEcccCCCchhHHHHHHH--------HHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEE
Q 027737 2 LKLFSYWRSSCSHRVRIGL--------NLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV 57 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l--------~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 57 (219)
+..|+.++|+.|+...-.+ ...+ .+....++....+....++........+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFGPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCCCCEEE
Confidence 4567788899999875333 1222 45666666433211124455555567899888
No 173
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=67.29 E-value=6.4 Score=30.96 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHHHhhcCCCCCCChHHHHHHHHHhCChhHHh
Q 027737 134 GKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQN 207 (219)
Q Consensus 134 ~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~~~~~~~~~~~~p~l~~~~~~~~~~p~~~~ 207 (219)
..+++.++..|.+ ++|.-|.+++- +|+.++..+.-- ..-..+++..+|+..+.+.-.+.+
T Consensus 10 ~~glk~l~~sLA~--ks~~~g~~~s~-------edv~vf~al~~e-----p~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLAE--KSYIEGYQLSK-------EDVVVFAALGVE-----PQSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhhc--ccCCCCCCccc-------ccceeehhcccC-----cchhhhhHHHHHHHHHHHHHHHHh
Confidence 5678999999998 89999999999 999998665321 112446777888877776555543
No 174
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=67.24 E-value=16 Score=32.89 Aligned_cols=57 Identities=25% Similarity=0.178 Sum_probs=40.3
Q ss_pred eEEcccCCCchhHHHHHHHHH----c-CCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNL----K-GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVS 64 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~----~-gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~ 64 (219)
+++|..+.||+|..+.-+++. . +|..+.+.+.. .+++.+......+|.++.||.++.
T Consensus 480 i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~------~~~~~~~~~v~~vP~~~i~~~~~~ 541 (555)
T TIGR03143 480 IKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSH------FPDLKDEYGIMSVPAIVVDDQQVY 541 (555)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECcc------cHHHHHhCCceecCEEEECCEEEE
Confidence 578888999999876664443 4 67777776652 355555556789999997775544
No 175
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=65.93 E-value=6.7 Score=34.91 Aligned_cols=71 Identities=17% Similarity=0.145 Sum_probs=45.3
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCc---ceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeeh----HHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLE---YEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDS----FAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~---~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es----~aI~~yl~ 74 (219)
+++|..+.||+|..+.-+++..-+. .+...++ + ...+++........||.+..|+..+.+. ..++..+.
T Consensus 120 i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id---~-~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~~~ 195 (517)
T PRK15317 120 FETYVSLSCHNCPDVVQALNLMAVLNPNITHTMID---G-ALFQDEVEARNIMAVPTVFLNGEEFGQGRMTLEEILAKLD 195 (517)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEE---c-hhCHhHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHh
Confidence 6789999999999888777665432 2222332 2 2345666666678999999776655542 23555555
Q ss_pred Hh
Q 027737 75 EK 76 (219)
Q Consensus 75 ~~ 76 (219)
+.
T Consensus 196 ~~ 197 (517)
T PRK15317 196 TG 197 (517)
T ss_pred cc
Confidence 43
No 176
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=62.05 E-value=8.2 Score=34.36 Aligned_cols=63 Identities=16% Similarity=0.100 Sum_probs=40.3
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSD 65 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~e 65 (219)
+++|..+.||+|..+.-+++..-+....+...+.++ ...+++........||.+..++..+.+
T Consensus 121 i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~-~~~~~~~~~~~v~~VP~~~i~~~~~~~ 183 (515)
T TIGR03140 121 FETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDG-ALFQDEVEALGIQGVPAVFLNGEEFHN 183 (515)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEc-hhCHHHHHhcCCcccCEEEECCcEEEe
Confidence 578999999999998887776544322222222222 224555555667899999977655554
No 177
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=61.44 E-value=26 Score=24.11 Aligned_cols=49 Identities=8% Similarity=-0.082 Sum_probs=31.4
Q ss_pred cccCCCchhHHHHHHHHHcCCc---ceEEEecCCCCCCCChhhhccCCCCCCceEE
Q 027737 5 FSYWRSSCSHRVRIGLNLKGLE---YEYKAVNLVKGEQFSPDFLKINPIGYVPALV 57 (219)
Q Consensus 5 ~~~~~s~~~~~vr~~l~~~gi~---~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 57 (219)
++.++|+.|+.++-+++...-. .+...++.. ..+++........+|++.
T Consensus 29 f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d----~~~~l~~~~~v~~vPt~~ 80 (113)
T cd02975 29 SSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFD----EDKEKAEKYGVERVPTTI 80 (113)
T ss_pred eCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCC----cCHHHHHHcCCCcCCEEE
Confidence 3567899999888887754322 233444422 245566666678899998
No 178
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=59.78 E-value=45 Score=21.62 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=43.5
Q ss_pred eEEcccCCCchhHHHHHHHHHc----CCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeeee------ehHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLK----GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVVS------DSFAI 69 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~------es~aI 69 (219)
+..|+.++|+.|+...-.+... +-++....++..+ ...+....-...+|++. .+|..+. +...|
T Consensus 21 vv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~----~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l 96 (103)
T PF00085_consen 21 VVYFYAPWCPPCKAFKPILEKLAKEYKDNVKFAKVDCDE----NKELCKKYGVKSVPTIIFFKNGKEVKRYNGPRNAESL 96 (103)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHHHTTTTSEEEEEETTT----SHHHHHHTTCSSSSEEEEEETTEEEEEEESSSSHHHH
T ss_pred EEEEeCCCCCccccccceecccccccccccccchhhhhc----cchhhhccCCCCCCEEEEEECCcEEEEEECCCCHHHH
Confidence 4567788999999887555432 2256667776432 35556666678899998 6665542 33445
Q ss_pred HHHHH
Q 027737 70 LMYLE 74 (219)
Q Consensus 70 ~~yl~ 74 (219)
..+|.
T Consensus 97 ~~~i~ 101 (103)
T PF00085_consen 97 IEFIE 101 (103)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 179
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=56.09 E-value=67 Score=22.44 Aligned_cols=63 Identities=14% Similarity=-0.026 Sum_probs=34.0
Q ss_pred eEEcccCCCchhHHHHHHHHH----cCCcceEEEecCCCC-CCCC----hhhhccC----CCCCCceEE--eCCeeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNL----KGLEYEYKAVNLVKG-EQFS----PDFLKIN----PIGYVPALV--DGDFVVS 64 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~----~gi~~~~~~v~~~~~-~~~~----~~~~~~~----p~~~vP~L~--~~~~~l~ 64 (219)
+..|+.++||+|+.+.=.|.. .++++-.+.++-... +... .++.... ....+|+++ .+|..+.
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v~~k~Gk~v~ 104 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFVHITDGKQVS 104 (122)
T ss_pred EEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEEEEeCCeEEE
Confidence 345788999999986555544 445555455442111 1111 1232322 344599998 6775543
No 180
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=52.93 E-value=70 Score=24.73 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=33.5
Q ss_pred eEEcccCCCchhHHHHHHHHHcCC---cceEEEecCCCCCCCChhhhccCCCCCCceEE
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGL---EYEYKAVNLVKGEQFSPDFLKINPIGYVPALV 57 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi---~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~ 57 (219)
+++|+.++|+.|..+.-+++..-- ......++.. ..++.........+|++.
T Consensus 137 I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~----~~~~~~~~~~V~~vPtl~ 191 (215)
T TIGR02187 137 IEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEAN----ENPDLAEKYGVMSVPKIV 191 (215)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCC----CCHHHHHHhCCccCCEEE
Confidence 356888999999988887776421 2333344432 244555555567899999
No 181
>PTZ00051 thioredoxin; Provisional
Probab=50.01 E-value=62 Score=20.97 Aligned_cols=58 Identities=12% Similarity=-0.001 Sum_probs=33.5
Q ss_pred eEEcccCCCchhHHHHHHHHHc---CCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLK---GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVV 63 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~---gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 63 (219)
+..|+.++|+.|+...-.+... ...+....++.. ....+.+......+|++. .+|..+
T Consensus 22 li~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~----~~~~~~~~~~v~~~Pt~~~~~~g~~~ 84 (98)
T PTZ00051 22 IVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVD----ELSEVAEKENITSMPTFKVFKNGSVV 84 (98)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECc----chHHHHHHCCCceeeEEEEEeCCeEE
Confidence 3466788899999776655542 112344444422 233444555567889887 566544
No 182
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=48.71 E-value=21 Score=24.65 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=21.8
Q ss_pred CceEE-eCCeeeeehHHHHHHHHHhCC
Q 027737 53 VPALV-DGDFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 53 vP~L~-~~~~~l~es~aI~~yl~~~~~ 78 (219)
+|.+. .+|.+++.|..|+++.+.++.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 35555 899999999999999999864
No 183
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=48.38 E-value=55 Score=21.16 Aligned_cols=58 Identities=12% Similarity=0.017 Sum_probs=35.4
Q ss_pred eEEcccCCCchhHHHHHHHHHc----CCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLK----GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVV 63 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 63 (219)
+..|+.++|+.|++..-.|... +..+....++.. ...++.+......+|++. .+|..+
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~----~~~~~~~~~~i~~~Pt~~~~~~g~~~ 81 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAE----ELPEISEKFEITAVPTFVFFRNGTIV 81 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEccc----cCHHHHHhcCCccccEEEEEECCEEE
Confidence 3456678899999887766542 334555666532 233444444456789887 666554
No 184
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=43.78 E-value=45 Score=28.38 Aligned_cols=110 Identities=14% Similarity=0.116 Sum_probs=64.1
Q ss_pred CceEEeCCeeeeehHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHHHHHHhccchhh-----HHHHHHHHHHHhcCCcHHH
Q 027737 53 VPALVDGDFVVSDSFAILMYLEEKYPQPPLL-PSDLKRKAINYQAANIVSSSIQPL-----QNLAVVKYIEEKAGADERD 126 (219)
Q Consensus 53 vP~L~~~~~~l~es~aI~~yl~~~~~~~~l~-p~~~~~~a~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 126 (219)
.+...+.++.+.|+.+|+.-|..... .+. |-+..+|.++..|+..+...-.+- +...+...+... +.+
T Consensus 98 w~~~~~~dQ~~VEaa~la~aL~~a~~--~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~~-G~~--- 171 (361)
T PF10022_consen 98 WGFIGDYDQRLVEAASLALALLRAPE--WLWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKKV-GEE--- 171 (361)
T ss_pred cCCcccchhhHhHHHHHHHHHHHCHH--HHHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHHc-CCC---
Confidence 34445667999999999999887532 233 447788888888888766543221 222222222221 111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeeecccccccccccccceEEehhHHHHH
Q 027737 127 IWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLYYICYLQADLYLAPQLYAA 178 (219)
Q Consensus 127 ~~~~~~l~~~l~~le~~L~~~~~~fl~G~~~s~~~~~~~~aD~~l~~~l~~~ 178 (219)
.-..++...|+.+|+.-.+ ..|..-..-.- .|.+-.-+++..
T Consensus 172 -~d~~~i~~~l~~~e~~Y~G--dGWY~DG~~~~-------~DYYns~aih~y 213 (361)
T PF10022_consen 172 -YDEERIDYDLERIEEWYLG--DGWYSDGPEFQ-------FDYYNSWAIHPY 213 (361)
T ss_pred -CcHHHHHHHHHHHHHHhcc--CCccccCCccC-------CcchHHHHHHHH
Confidence 1126677788888886655 56665223334 677775555544
No 185
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=41.39 E-value=46 Score=24.18 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=46.3
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhcc-C-C--CCCCceEEeCCeeeee---hHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKI-N-P--IGYVPALVDGDFVVSD---SFAILMYLE 74 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~-~-p--~~~vP~L~~~~~~l~e---s~aI~~yl~ 74 (219)
|..|+.+.|++|..-.=.++.+|.....+..+.. ..++.. . | .+.--+.+.+|..+-+ ..+|.+.|+
T Consensus 28 ~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~------~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI~~ll~ 101 (149)
T COG3019 28 MVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDF------LALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAIARLLA 101 (149)
T ss_pred EEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcH------HHHHHhcCCChhhccccEEEEcCEEEeccCCHHHHHHHHh
Confidence 5688999999999999999989988877766522 122211 0 1 1223355556655543 568999999
Q ss_pred HhC
Q 027737 75 EKY 77 (219)
Q Consensus 75 ~~~ 77 (219)
++.
T Consensus 102 ~~p 104 (149)
T COG3019 102 EKP 104 (149)
T ss_pred CCC
Confidence 876
No 186
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=40.04 E-value=1.2e+02 Score=20.55 Aligned_cols=57 Identities=14% Similarity=-0.039 Sum_probs=32.3
Q ss_pred EEcccCCCchhHHHHHHHHH-----cCCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeee
Q 027737 3 KLFSYWRSSCSHRVRIGLNL-----KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVV 63 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~-----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 63 (219)
..|+.++|+.|+...-.+.. .|.......++... ...+........+|++. .+|..+
T Consensus 29 V~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~----~~~l~~~~~V~~~Pt~~i~~~g~~~ 92 (111)
T cd02963 29 IKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGH----ERRLARKLGAHSVPAIVGIINGQVT 92 (111)
T ss_pred EEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccc----cHHHHHHcCCccCCEEEEEECCEEE
Confidence 45677889988766544322 23234445555322 23444445567889888 666543
No 187
>PHA02278 thioredoxin-like protein
Probab=37.93 E-value=1.3e+02 Score=20.35 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=33.4
Q ss_pred EcccCCCchhHHHHHHHHHc----CCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeeee
Q 027737 4 LFSYWRSSCSHRVRIGLNLK----GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVVS 64 (219)
Q Consensus 4 L~~~~~s~~~~~vr~~l~~~----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~ 64 (219)
-|+.++|+.|+...=.++.. +.......++....+...+++....-...+|++. .+|..+.
T Consensus 20 ~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I~~iPT~i~fk~G~~v~ 86 (103)
T PHA02278 20 MITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDIMSTPVLIGYKDGQLVK 86 (103)
T ss_pred EEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCCccccEEEEEECCEEEE
Confidence 45677899888666544332 2222344444322111123454555567899998 6776553
No 188
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=36.56 E-value=1.3e+02 Score=23.24 Aligned_cols=57 Identities=11% Similarity=0.020 Sum_probs=34.3
Q ss_pred eEEccc---CCCchhHHHHHHHHHcC-----CcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCee
Q 027737 2 LKLFSY---WRSSCSHRVRIGLNLKG-----LEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFV 62 (219)
Q Consensus 2 ~~L~~~---~~s~~~~~vr~~l~~~g-----i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~ 62 (219)
+.+|.. ++|+.|..+.-.+++.. +.+..+.++.. ...++....-...+|++. .+|..
T Consensus 23 i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~----~~~~l~~~~~V~~~Pt~~~f~~g~~ 89 (215)
T TIGR02187 23 IVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTP----EDKEEAEKYGVERVPTTIILEEGKD 89 (215)
T ss_pred EEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCc----ccHHHHHHcCCCccCEEEEEeCCee
Confidence 346666 78899998777776642 33344444422 234444555567889998 55543
No 189
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=33.57 E-value=1.2e+02 Score=18.91 Aligned_cols=27 Identities=19% Similarity=0.128 Sum_probs=21.8
Q ss_pred CCCceEEeCCeeeeehHHHHHHHHHhCC
Q 027737 51 GYVPALVDGDFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 51 ~~vP~L~~~~~~l~es~aI~~yl~~~~~ 78 (219)
..-||+..+| ..+|=.+|.+||....+
T Consensus 14 M~dPVi~~~G-~tyer~~I~~~l~~~~~ 40 (73)
T PF04564_consen 14 MRDPVILPSG-HTYERSAIERWLEQNGG 40 (73)
T ss_dssp -SSEEEETTS-EEEEHHHHHHHHCTTSS
T ss_pred hhCceeCCcC-CEEcHHHHHHHHHcCCC
Confidence 4569999777 88999999999999443
No 190
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=33.10 E-value=67 Score=21.83 Aligned_cols=64 Identities=13% Similarity=0.060 Sum_probs=36.7
Q ss_pred EEcccCCCchhHHHHHHHHHcCC---cceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeeeeehHHHHH
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGL---EYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVVSDSFAILM 71 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi---~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~es~aI~~ 71 (219)
..|+.++|+.|+.+.-.++...- ...+..++..+ . ++....-...+|++. .+|..+........
T Consensus 29 v~F~a~~c~~C~~l~~~l~~la~~~~~v~f~~vd~~~----~-~l~~~~~i~~~Pt~~~f~~G~~v~~~~G~~~ 97 (113)
T cd02957 29 VHFYEPGFPRCKILDSHLEELAAKYPETKFVKINAEK----A-FLVNYLDIKVLPTLLVYKNGELIDNIVGFEE 97 (113)
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHCCCcEEEEEEchh----h-HHHHhcCCCcCCEEEEEECCEEEEEEecHHH
Confidence 45677889989877655544211 12344555321 1 444444457889998 77877665444333
No 191
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=32.97 E-value=49 Score=21.28 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=20.7
Q ss_pred CCchhHHHHHHHHHcCCcceEEEe
Q 027737 9 RSSCSHRVRIGLNLKGLEYEYKAV 32 (219)
Q Consensus 9 ~s~~~~~vr~~l~~~gi~~~~~~v 32 (219)
.-+|++|+.-.|+..|++|+..+.
T Consensus 14 evGF~rk~L~I~E~~~is~Eh~PS 37 (76)
T cd04911 14 EVGFGRKLLSILEDNGISYEHMPS 37 (76)
T ss_pred hhcHHHHHHHHHHHcCCCEeeecC
Confidence 357899999999999999997654
No 192
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=32.60 E-value=1.6e+02 Score=19.88 Aligned_cols=71 Identities=14% Similarity=0.028 Sum_probs=39.9
Q ss_pred EcccCCCchhHHHHHHHHHcCC--cceEEEecCCCCCCCChhhhccC---CCCCCceEEeCCe-eeeehHHHHHHHHHh
Q 027737 4 LFSYWRSSCSHRVRIGLNLKGL--EYEYKAVNLVKGEQFSPDFLKIN---PIGYVPALVDGDF-VVSDSFAILMYLEEK 76 (219)
Q Consensus 4 L~~~~~s~~~~~vr~~l~~~gi--~~~~~~v~~~~~~~~~~~~~~~~---p~~~vP~L~~~~~-~l~es~aI~~yl~~~ 76 (219)
|+|-..||.|....-.+...+. .++.+.+.-..+.. -.....++ ....+-+ .++|. ...++.|+.+-+...
T Consensus 1 v~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~g~~~~~G~~A~~~l~~~~ 77 (114)
T PF04134_consen 1 VFYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQA-LLASYGISPEDADSRLHL-IDDGERVYRGSDAVLRLLRRL 77 (114)
T ss_pred CEECCCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhh-HHHhcCcCHHHHcCeeEE-ecCCCEEEEcHHHHHHHHHHc
Confidence 4567889999988877777765 34545442111000 00111121 1233333 55665 999999999886654
No 193
>PHA03075 glutaredoxin-like protein; Provisional
Probab=30.69 E-value=81 Score=22.14 Aligned_cols=67 Identities=22% Similarity=0.132 Sum_probs=47.5
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCC
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~ 78 (219)
+.|+|-|.|+-|..+.-+|.+..=+|+...|+...- | ...+.+=+|..++.. .=-+++.+|+...+-
T Consensus 5 LILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlSf------F---sK~g~v~~lg~d~~y-~lInn~~~~lgne~v 71 (123)
T PHA03075 5 LILFGKPLCSVCESISEALKELEDEYDILRVNILSF------F---SKDGQVKVLGMDKGY-TLINNFFKHLGNEYV 71 (123)
T ss_pred EEEeCCcccHHHHHHHHHHHHhhccccEEEEEeeee------e---ccCCceEEEecccce-ehHHHHHHhhcccEE
Confidence 579999999999999999999999999999984321 1 113455566643322 224678888887653
No 194
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=30.65 E-value=63 Score=26.29 Aligned_cols=59 Identities=10% Similarity=0.120 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHcCCcceEEEecCCCCCCCChhhhcc----CCCCCCceEEeCCeeeeehHHHHHH
Q 027737 12 CSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPDFLKI----NPIGYVPALVDGDFVVSDSFAILMY 72 (219)
Q Consensus 12 ~~~~vr~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~----~p~~~vP~L~~~~~~l~es~aI~~y 72 (219)
.|..||.+|+-.+|.|+...|.+... ..+++..+ .-.-.+|.+..+|..|-+...|++-
T Consensus 149 ~C~~VR~ilesf~V~v~ERDVSMd~~--fr~EL~~~lg~~~~~~~LPrVFV~GryIGgaeeV~~L 211 (281)
T KOG2824|consen 149 DCNAVRAILESFRVKVDERDVSMDSE--FREELQELLGEDEKAVSLPRVFVKGRYIGGAEEVVRL 211 (281)
T ss_pred HHHHHHHHHHhCceEEEEecccccHH--HHHHHHHHHhcccccCccCeEEEccEEeccHHHhhhh
Confidence 57899999999999999999997642 23333322 1245789777888888887777663
No 195
>COG3646 Uncharacterized phage-encoded protein [Function unknown]
Probab=30.25 E-value=56 Score=24.49 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCeeecc
Q 027737 124 ERDIWAKTHIGKGFAALEKLLKDYAGKYATGD 155 (219)
Q Consensus 124 ~~~~~~~~~l~~~l~~le~~L~~~~~~fl~G~ 155 (219)
+....++..+.+.++.+|..|.. .++..+.
T Consensus 87 ~k~~~Fk~~~VkrF~Eme~~l~~--~~~~~~~ 116 (167)
T COG3646 87 EKVRQFKAALVKRFDEMEEALAE--RAFARAL 116 (167)
T ss_pred chhhhHHHHHHHHHHHHHHHHHh--hhhhHHH
Confidence 45677888899999999999987 5665553
No 196
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=29.64 E-value=1.7e+02 Score=20.04 Aligned_cols=16 Identities=25% Similarity=0.316 Sum_probs=12.4
Q ss_pred eEEcccCCCchhHHHH
Q 027737 2 LKLFSYWRSSCSHRVR 17 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr 17 (219)
+..|+.++|++|++..
T Consensus 18 lv~f~a~wC~~C~~~~ 33 (125)
T cd02951 18 LLLFSQPGCPYCDKLK 33 (125)
T ss_pred EEEEeCCCCHHHHHHH
Confidence 4567788899999865
No 197
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=29.47 E-value=43 Score=20.41 Aligned_cols=31 Identities=16% Similarity=0.066 Sum_probs=20.3
Q ss_pred EEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
++|......-+..++-+|+..||++....-.
T Consensus 2 ~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~~ 32 (67)
T PF09413_consen 2 KLYTAGDPIEAELIKGLLEENGIPAFVKNEH 32 (67)
T ss_dssp EEEEE--HHHHHHHHHHHHHTT--EE--S--
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEECCc
Confidence 6787778888999999999999999765443
No 198
>COG3011 Predicted thiol-disulfide oxidoreductase [General function prediction only]
Probab=29.37 E-value=2e+02 Score=20.82 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=41.8
Q ss_pred eEEcccCCCchhHH-HHHHHHH-cCCcceEEEecCCCCCCCChhhhccCCC---C-CCceEEeCCeeeeehHHHHHHHHH
Q 027737 2 LKLFSYWRSSCSHR-VRIGLNL-KGLEYEYKAVNLVKGEQFSPDFLKINPI---G-YVPALVDGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 2 ~~L~~~~~s~~~~~-vr~~l~~-~gi~~~~~~v~~~~~~~~~~~~~~~~p~---~-~vP~L~~~~~~l~es~aI~~yl~~ 75 (219)
+++++...|+.|.. +++++.+ .+--+.+..+.-.. .-......+. . ..=+++++|..+.+|.|+++-+..
T Consensus 10 ~vvlyDG~C~lC~~~vrfLi~~D~~~~i~f~~~q~e~----g~~~l~~~~l~~~~~~s~~~~~~g~~~~~sdA~~~i~~~ 85 (137)
T COG3011 10 LVVLYDGVCPLCDGWVRFLIRRDQGGRIRFAALQSEP----GQALLEAAGLDPEDVDSVLLVEAGQLLVGSDAAIRILRL 85 (137)
T ss_pred EEEEECCcchhHHHHHHHHHHhccCCcEEEEeccCch----hhhHHhhcCCChhhhheeeEecCCceEeccHHHHHHHHH
Confidence 45666778887764 5555554 34445555544222 1222222222 1 222444889999999999998887
Q ss_pred hC
Q 027737 76 KY 77 (219)
Q Consensus 76 ~~ 77 (219)
..
T Consensus 86 L~ 87 (137)
T COG3011 86 LP 87 (137)
T ss_pred CC
Confidence 64
No 199
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=28.47 E-value=35 Score=20.86 Aligned_cols=21 Identities=43% Similarity=0.649 Sum_probs=16.0
Q ss_pred eEEcccC----CCchhHHHHHHHHH
Q 027737 2 LKLFSYW----RSSCSHRVRIGLNL 22 (219)
Q Consensus 2 ~~L~~~~----~s~~~~~vr~~l~~ 22 (219)
||||.+. .+.+|++|-.+|..
T Consensus 3 mKLYRfiTGpDDssFChrvta~LN~ 27 (70)
T COG5515 3 MKLYRFITGPDDSSFCHRVTAALNK 27 (70)
T ss_pred ceeeEeecCCchHHHHHHHHHHHhC
Confidence 5777554 47799999999876
No 200
>KOG0079 consensus GTP-binding protein H-ray, small G protein superfamily [General function prediction only]
Probab=28.12 E-value=43 Score=24.76 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=26.4
Q ss_pred CCChHHHHHHHHHhC-ChhHHhhCCCCCCCCCC
Q 027737 187 TQFPLLLRLHEAYSK-LPAFQNAVPEKQPDAPS 218 (219)
Q Consensus 187 ~~~p~l~~~~~~~~~-~p~~~~~~~~~~~~~~~ 218 (219)
+.|-|..+|++.+++ -|++.+++-....+.|+
T Consensus 94 ESF~Nv~rWLeei~~ncdsv~~vLVGNK~d~~~ 126 (198)
T KOG0079|consen 94 ESFNNVKRWLEEIRNNCDSVPKVLVGNKNDDPE 126 (198)
T ss_pred hhhHhHHHHHHHHHhcCccccceecccCCCCcc
Confidence 557899999999986 78888888887777665
No 201
>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1. TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.
Probab=27.19 E-value=2.2e+02 Score=19.88 Aligned_cols=59 Identities=7% Similarity=-0.029 Sum_probs=30.9
Q ss_pred CCCchhHHHHHHH----HHcCCcceEEEecCCCCC---CCChhhhccCCCC-CCceEE--eCCeeeeeh
Q 027737 8 WRSSCSHRVRIGL----NLKGLEYEYKAVNLVKGE---QFSPDFLKINPIG-YVPALV--DGDFVVSDS 66 (219)
Q Consensus 8 ~~s~~~~~vr~~l----~~~gi~~~~~~v~~~~~~---~~~~~~~~~~p~~-~vP~L~--~~~~~l~es 66 (219)
.+|+.|+.+.-.+ ...+-.+.+..++..+.. ....++....-.. .+|++. .++..+.|.
T Consensus 38 ~WC~pCr~~~P~l~~l~~~~~~~v~fv~Vdvd~~~~w~d~~~~~~~~~~I~~~iPT~~~~~~~~~l~~~ 106 (119)
T cd02952 38 SWCPDCVKAEPVVREALKAAPEDCVFIYCDVGDRPYWRDPNNPFRTDPKLTTGVPTLLRWKTPQRLVED 106 (119)
T ss_pred CCCHhHHhhchhHHHHHHHCCCCCEEEEEEcCCcccccCcchhhHhccCcccCCCEEEEEcCCceecch
Confidence 5788888554433 333323555666643311 1123444333334 799998 555555543
No 202
>cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Probab=24.89 E-value=1.4e+02 Score=22.31 Aligned_cols=63 Identities=8% Similarity=-0.041 Sum_probs=36.3
Q ss_pred EcccCCCchhHHHHHHHHHc---CCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeeeeehHHHHH
Q 027737 4 LFSYWRSSCSHRVRIGLNLK---GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVVSDSFAILM 71 (219)
Q Consensus 4 L~~~~~s~~~~~vr~~l~~~---gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~es~aI~~ 71 (219)
.|+.++|+.|+.+--.|... --...+..++... . ++....+...+|++. .+|..+..-....+
T Consensus 89 ~Fya~wc~~Ck~m~~~l~~LA~~~~~vkF~kVd~d~----~-~l~~~f~v~~vPTlllyk~G~~v~~~vG~~~ 156 (175)
T cd02987 89 HIYEPGIPGCAALNSSLLCLAAEYPAVKFCKIRASA----T-GASDEFDTDALPALLVYKGGELIGNFVRVTE 156 (175)
T ss_pred EEECCCCchHHHHHHHHHHHHHHCCCeEEEEEeccc----h-hhHHhCCCCCCCEEEEEECCEEEEEEechHH
Confidence 45667888888554333221 1134455555321 1 445556678899998 68877765444444
No 203
>PF07511 DUF1525: Protein of unknown function (DUF1525); InterPro: IPR011090 This family of proteins is restricted to the Gammaproteobacteria. Members belong to extended genomic regions that appear to be spread by conjugative transfer.
Probab=24.83 E-value=88 Score=21.87 Aligned_cols=26 Identities=31% Similarity=0.381 Sum_probs=21.2
Q ss_pred CCCCceEE-eCCeeeeehHHHHHHHHH
Q 027737 50 IGYVPALV-DGDFVVSDSFAILMYLEE 75 (219)
Q Consensus 50 ~~~vP~L~-~~~~~l~es~aI~~yl~~ 75 (219)
..++|+++ |+..++.+...|.+-+..
T Consensus 81 i~k~PAVVfD~~~VVYG~tDV~~A~~~ 107 (114)
T PF07511_consen 81 ITKYPAVVFDDRYVVYGETDVARALAR 107 (114)
T ss_pred ccccCEEEEcCCeEEecccHHHHHHHH
Confidence 45899999 888999999988876654
No 204
>COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]
Probab=24.04 E-value=2.6e+02 Score=23.21 Aligned_cols=73 Identities=14% Similarity=0.079 Sum_probs=50.7
Q ss_pred eEEcccCCCchhHHHHHHHHH----cCCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeeeeeh------HHH
Q 027737 2 LKLFSYWRSSCSHRVRIGLNL----KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVVSDS------FAI 69 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~es------~aI 69 (219)
+.+|+.++|+-|....=.|+. ++=.|.+..|+... .+..-...-...||+++ .+|.+|.+- ..|
T Consensus 47 lV~fWap~~~~c~qL~p~Lekla~~~~G~f~LakvN~D~----~p~vAaqfgiqsIPtV~af~dGqpVdgF~G~qPesql 122 (304)
T COG3118 47 LVDFWAPWCGPCKQLTPTLEKLAAEYKGKFKLAKVNCDA----EPMVAAQFGVQSIPTVYAFKDGQPVDGFQGAQPESQL 122 (304)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHhCCceEEEEecCCc----chhHHHHhCcCcCCeEEEeeCCcCccccCCCCcHHHH
Confidence 457788888888876666554 45567888887543 45555666678899988 677665542 468
Q ss_pred HHHHHHhCC
Q 027737 70 LMYLEEKYP 78 (219)
Q Consensus 70 ~~yl~~~~~ 78 (219)
-++|++..+
T Consensus 123 r~~ld~~~~ 131 (304)
T COG3118 123 RQFLDKVLP 131 (304)
T ss_pred HHHHHHhcC
Confidence 888888655
No 205
>PRK09381 trxA thioredoxin; Provisional
Probab=23.58 E-value=2.3e+02 Score=18.72 Aligned_cols=58 Identities=14% Similarity=0.009 Sum_probs=33.2
Q ss_pred EEcccCCCchhHHHHHHHHH----cCCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeeee
Q 027737 3 KLFSYWRSSCSHRVRIGLNL----KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVVS 64 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~ 64 (219)
..|+.++|+.|+...-.++. .+-.+....++... .+.+........+|+++ .+|..+.
T Consensus 26 v~f~~~~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~~~~~G~~~~ 89 (109)
T PRK09381 26 VDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ----NPGTAPKYGIRGIPTLLLFKNGEVAA 89 (109)
T ss_pred EEEECCCCHHHHHHhHHHHHHHHHhCCCcEEEEEECCC----ChhHHHhCCCCcCCEEEEEeCCeEEE
Confidence 34567789988877544432 22235556665432 23333344567899887 6676543
No 206
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=23.23 E-value=2.1e+02 Score=18.25 Aligned_cols=57 Identities=18% Similarity=0.036 Sum_probs=34.7
Q ss_pred EEcccCCCchhHHHHHHHHHc----CCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeee
Q 027737 3 KLFSYWRSSCSHRVRIGLNLK----GLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVV 63 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~----gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 63 (219)
..|+.++|+.|+...-.++.. +-.+....++... ...+........+|+++ ++|..+
T Consensus 17 v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~----~~~l~~~~~i~~~Pt~~~~~~g~~~ 79 (96)
T cd02956 17 VDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCDA----QPQIAQQFGVQALPTVYLFAAGQPV 79 (96)
T ss_pred EEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEeccC----CHHHHHHcCCCCCCEEEEEeCCEEe
Confidence 455678899888776665542 2234455565332 44555555567899998 666543
No 207
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=23.10 E-value=3.1e+02 Score=20.07 Aligned_cols=58 Identities=10% Similarity=0.093 Sum_probs=32.9
Q ss_pred EEcccCCCchhHHHHHHHHHc-----CCcceEEEecCCCCCCCChhhhccCCC------CCCceEE--eCCeeee
Q 027737 3 KLFSYWRSSCSHRVRIGLNLK-----GLEYEYKAVNLVKGEQFSPDFLKINPI------GYVPALV--DGDFVVS 64 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~-----gi~~~~~~v~~~~~~~~~~~~~~~~p~------~~vP~L~--~~~~~l~ 64 (219)
..|+.++|+.|+...-.++.. +-.+.+..++... .++..+..-. ..+|++. .+|..+.
T Consensus 52 V~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~----~~~la~~~~V~~~~~v~~~PT~ilf~~Gk~v~ 122 (152)
T cd02962 52 VEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIGR----FPNVAEKFRVSTSPLSKQLPTIILFQGGKEVA 122 (152)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEECCC----CHHHHHHcCceecCCcCCCCEEEEEECCEEEE
Confidence 456678889888766444332 2335566666433 2233322222 2489988 7777665
No 208
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=22.47 E-value=1.4e+02 Score=19.27 Aligned_cols=58 Identities=10% Similarity=-0.004 Sum_probs=30.1
Q ss_pred eEEcccCCCchhHHHHHHHH----HcC--CcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCe
Q 027737 2 LKLFSYWRSSCSHRVRIGLN----LKG--LEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDF 61 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~----~~g--i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~ 61 (219)
+.+|+.++|+.|+...=.+. ..+ -.+....++... ...+.+........+|+++ .+|.
T Consensus 21 ~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~--~~~~~~~~~~~i~~~Pt~~~~~~g~ 86 (104)
T cd02997 21 LVMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTK--PEHDALKEEYNVKGFPTFKYFENGK 86 (104)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEECCC--CccHHHHHhCCCccccEEEEEeCCC
Confidence 34666788998887743322 211 223344444322 1134444444556789887 4554
No 209
>COG3150 Predicted esterase [General function prediction only]
Probab=22.42 E-value=93 Score=23.62 Aligned_cols=32 Identities=19% Similarity=0.151 Sum_probs=26.0
Q ss_pred eEEcccCCCchhHHHHHHHHHcCCcceEEEec
Q 027737 2 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVN 33 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~~gi~~~~~~v~ 33 (219)
+=|++|..||.++++.++++..+-....+.+.
T Consensus 3 lYlHGFnSSP~shka~l~~q~~~~~~~~i~y~ 34 (191)
T COG3150 3 LYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYS 34 (191)
T ss_pred EEEecCCCCcccHHHHHHHHHHhccccceeee
Confidence 34789999999999999999988776655554
No 210
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=21.84 E-value=2.4e+02 Score=18.32 Aligned_cols=55 Identities=16% Similarity=0.041 Sum_probs=31.6
Q ss_pred EEcccCCCchhHHHHHHHHHcCC----cceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCe
Q 027737 3 KLFSYWRSSCSHRVRIGLNLKGL----EYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDF 61 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~gi----~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~ 61 (219)
..|+.++|+.|+...-.+....- .+.+..++..+ .+.+.+......+|++. .+|.
T Consensus 23 v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~----~~~~~~~~~v~~~Pt~~~~~~g~ 83 (101)
T cd03003 23 VNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNCGD----DRMLCRSQGVNSYPSLYVFPSGM 83 (101)
T ss_pred EEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeCCc----cHHHHHHcCCCccCEEEEEcCCC
Confidence 45667889988876655544322 24455555432 23444444467889887 5554
No 211
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=21.77 E-value=92 Score=20.65 Aligned_cols=56 Identities=13% Similarity=-0.064 Sum_probs=30.9
Q ss_pred EEcccCCCchhHHHHHHHHH----cC-CcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeee
Q 027737 3 KLFSYWRSSCSHRVRIGLNL----KG-LEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVV 63 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~----~g-i~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l 63 (219)
..|+.++|+.|+...-.+.. .+ -...+..++.. ..+.....-...+|++. .+|..+
T Consensus 22 v~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d-----~~~~~~~~~v~~~Pt~~~~~~g~~~ 84 (102)
T cd02948 22 VDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEAD-----TIDTLKRYRGKCEPTFLFYKNGELV 84 (102)
T ss_pred EEEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC-----CHHHHHHcCCCcCcEEEEEECCEEE
Confidence 45677889988876544433 22 12334444422 22334444467788877 666554
No 212
>PRK10996 thioredoxin 2; Provisional
Probab=21.73 E-value=3e+02 Score=19.47 Aligned_cols=59 Identities=12% Similarity=0.023 Sum_probs=35.6
Q ss_pred eEEcccCCCchhHHHHHHHHH----cCCcceEEEecCCCCCCCChhhhccCCCCCCceEE--eCCeeee
Q 027737 2 LKLFSYWRSSCSHRVRIGLNL----KGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALV--DGDFVVS 64 (219)
Q Consensus 2 ~~L~~~~~s~~~~~vr~~l~~----~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~--~~~~~l~ 64 (219)
+..|+.++|+.|+...-.+.. .+-.+....++... .+++.+..-...+|++. ++|..+.
T Consensus 56 vv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~----~~~l~~~~~V~~~Ptlii~~~G~~v~ 120 (139)
T PRK10996 56 VIDFWAPWCGPCRNFAPIFEDVAAERSGKVRFVKVNTEA----ERELSARFRIRSIPTIMIFKNGQVVD 120 (139)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEeCCC----CHHHHHhcCCCccCEEEEEECCEEEE
Confidence 345667889988876544433 23345555665432 34555555567899988 6776543
No 213
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=20.67 E-value=2.9e+02 Score=18.92 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=29.8
Q ss_pred EEcccCCCchhHHHHHHHHHc-C---CcceEEEecCCCCCCCChhhhccCCCC-CCceEE--e-CCeeee
Q 027737 3 KLFSYWRSSCSHRVRIGLNLK-G---LEYEYKAVNLVKGEQFSPDFLKINPIG-YVPALV--D-GDFVVS 64 (219)
Q Consensus 3 ~L~~~~~s~~~~~vr~~l~~~-g---i~~~~~~v~~~~~~~~~~~~~~~~p~~-~vP~L~--~-~~~~l~ 64 (219)
.-|+..+|+.|+...-.+... . ..-..+.++....+ .+.....+..+ .+|++. + +|..+.
T Consensus 24 V~F~a~WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~~--~~~~~~~~~~g~~vPt~~f~~~~Gk~~~ 91 (117)
T cd02959 24 LLIHKTWCGACKALKPKFAESKEISELSHNFVMVNLEDDE--EPKDEEFSPDGGYIPRILFLDPSGDVHP 91 (117)
T ss_pred EEEeCCcCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCCC--CchhhhcccCCCccceEEEECCCCCCch
Confidence 445678899998775555542 1 12233344433211 11112333333 489988 4 565544
No 214
>smart00313 PXA Domain associated with PX domains. unpubl. observations
Probab=20.51 E-value=3.3e+02 Score=20.31 Aligned_cols=39 Identities=8% Similarity=-0.116 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHh
Q 027737 107 LQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLK 145 (219)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~ 145 (219)
+++.++..|+.....+++....++..+...+..+.++++
T Consensus 15 IirdfV~sWY~~is~d~~F~~~i~~~l~~~~~~l~~Rl~ 53 (176)
T smart00313 15 IIRDYVQGWYKGVSEDPSFLREIEQTLEYILRQLYRRLS 53 (176)
T ss_pred HHHHHHHHHhccCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455544433444444555555555555555544
No 215
>PRK09266 hypothetical protein; Provisional
Probab=20.12 E-value=95 Score=24.87 Aligned_cols=60 Identities=25% Similarity=0.278 Sum_probs=37.7
Q ss_pred HHHHcCCcceEEEecCCCCCCCChhhhccCCCCCCceEEeCCeeeeehHHHHHHHHHhCC
Q 027737 19 GLNLKGLEYEYKAVNLVKGEQFSPDFLKINPIGYVPALVDGDFVVSDSFAILMYLEEKYP 78 (219)
Q Consensus 19 ~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yl~~~~~ 78 (219)
.+...|++++...+.+.+-....+-|..-+-.+-+||-..++..+.....|.+.|.+.|-
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~~ 259 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRGQRAVSAIDDVALPDSHALLELLRRAYE 259 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccceEEEEEECCEECCCCchHHHHHHHHHH
Confidence 455679999988887654322233333333457889998777666544567777766553
Done!