Query 027739
Match_columns 219
No_of_seqs 131 out of 1115
Neff 6.0
Searched_HMMs 29240
Date Tue Mar 26 00:46:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027739.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027739hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1khd_A Anthranilate phosphorib 100.0 1.5E-59 5.1E-64 427.1 20.5 190 1-190 72-263 (345)
2 1vqu_A Anthranilate phosphorib 100.0 2.7E-58 9.2E-63 422.7 22.3 190 1-190 86-287 (374)
3 1o17_A Anthranilate PRT, anthr 100.0 3.6E-58 1.2E-62 418.0 18.4 188 1-190 62-250 (345)
4 2elc_A Trp D, anthranilate pho 100.0 7.4E-58 2.5E-62 413.6 19.5 185 1-190 59-244 (329)
5 4hkm_A Anthranilate phosphorib 100.0 8.3E-58 2.9E-62 415.5 20.0 190 1-190 65-257 (346)
6 3r88_A Anthranilate phosphorib 100.0 4.3E-57 1.5E-61 415.1 21.4 189 1-190 85-277 (377)
7 2dsj_A Pyrimidine-nucleoside ( 100.0 1.4E-37 4.9E-42 288.8 13.2 148 1-151 62-225 (423)
8 3h5q_A PYNP, pyrimidine-nucleo 100.0 5.1E-36 1.7E-40 279.3 12.5 145 1-152 65-230 (436)
9 1brw_A PYNP, protein (pyrimidi 100.0 2.4E-35 8.2E-40 274.8 13.1 152 1-159 62-238 (433)
10 1uou_A Thymidine phosphorylase 100.0 5.8E-35 2E-39 274.6 14.4 152 1-159 89-266 (474)
11 2tpt_A Thymidine phosphorylase 100.0 1.4E-33 4.9E-38 263.3 15.1 152 1-159 63-241 (440)
12 1o51_A Hypothetical protein TM 61.5 13 0.00043 28.0 4.9 74 135-209 28-106 (114)
13 3epr_A Hydrolase, haloacid deh 51.2 31 0.0011 27.9 6.1 57 14-71 9-66 (264)
14 3lw7_A Adenylate kinase relate 48.9 58 0.002 23.6 6.9 45 102-146 54-99 (179)
15 4gim_A Pseudouridine-5'-phosph 48.5 38 0.0013 30.2 6.5 111 18-135 126-271 (335)
16 4ex8_A ALNA; alpha/beta/alpha- 46.0 24 0.00083 31.2 4.8 122 17-148 105-260 (316)
17 3qgm_A P-nitrophenyl phosphata 43.9 20 0.00067 28.9 3.8 57 14-71 12-69 (268)
18 1vli_A Spore coat polysacchari 41.7 1E+02 0.0035 27.9 8.4 147 15-162 30-197 (385)
19 1yv9_A Hydrolase, haloacid deh 40.4 82 0.0028 25.0 7.0 58 14-71 9-67 (264)
20 3ovg_A Amidohydrolase; structu 39.1 45 0.0015 29.6 5.6 75 13-90 152-238 (363)
21 2ho4_A Haloacid dehalogenase-l 37.1 54 0.0018 25.7 5.3 58 14-71 11-68 (259)
22 3ixl_A Amdase, arylmalonate de 35.8 1.4E+02 0.0049 24.4 8.0 112 45-162 31-153 (240)
23 2agk_A 1-(5-phosphoribosyl)-5- 34.0 75 0.0026 26.6 6.0 77 71-151 37-127 (260)
24 2dcl_A Hypothetical UPF0166 pr 34.0 50 0.0017 25.1 4.4 75 134-209 23-102 (127)
25 1vjr_A 4-nitrophenylphosphatas 33.8 39 0.0013 27.0 4.0 57 13-70 20-77 (271)
26 1j3m_A The conserved hypotheti 31.7 1.1E+02 0.0039 22.4 6.1 60 72-150 14-73 (129)
27 2wqp_A Polysialic acid capsule 30.8 1.5E+02 0.0052 26.3 7.6 147 14-162 20-186 (349)
28 2l48_A N-acetylmuramoyl-L-alan 29.9 1E+02 0.0035 22.1 5.1 37 126-162 19-55 (85)
29 1zjj_A Hypothetical protein PH 29.1 40 0.0014 27.2 3.4 57 14-70 5-61 (263)
30 4e21_A 6-phosphogluconate dehy 28.8 2.9E+02 0.0098 24.0 9.1 110 15-151 25-134 (358)
31 3rjz_A N-type ATP pyrophosphat 28.7 2.2E+02 0.0074 23.7 7.9 115 31-164 17-154 (237)
32 3pdw_A Uncharacterized hydrola 28.3 27 0.00094 28.0 2.2 57 14-71 10-67 (266)
33 3kc2_A Uncharacterized protein 28.2 51 0.0018 28.9 4.1 58 14-71 17-75 (352)
34 1zbr_A AAQ65385, conserved hyp 26.8 1.6E+02 0.0056 26.0 7.1 69 107-182 152-222 (349)
35 2kok_A Arsenate reductase; bru 26.7 16 0.00055 26.9 0.4 50 67-116 11-62 (120)
36 4a7p_A UDP-glucose dehydrogena 25.9 2.5E+02 0.0085 25.4 8.4 136 14-166 10-165 (446)
37 2hx1_A Predicted sugar phospha 24.0 62 0.0021 26.2 3.6 56 14-69 18-73 (284)
38 3a1y_A 50S ribosomal protein P 23.6 74 0.0025 20.8 3.2 31 32-71 4-34 (58)
39 1rw1_A Conserved hypothetical 22.9 15 0.0005 26.9 -0.5 52 67-118 6-59 (114)
40 2r0b_A Serine/threonine/tyrosi 22.4 1.3E+02 0.0046 22.0 5.0 54 40-98 88-144 (154)
41 3glk_A Acetyl-COA carboxylase 22.1 1.3E+02 0.0043 28.0 5.7 62 27-89 109-180 (540)
42 2lpm_A Two-component response 21.9 1.2E+02 0.0042 22.2 4.6 49 54-102 19-70 (123)
43 3fz4_A Putative arsenate reduc 21.8 31 0.001 25.6 1.1 56 67-127 9-66 (120)
44 3gxh_A Putative phosphatase (D 21.4 2.6E+02 0.0088 20.9 6.6 53 30-82 28-90 (157)
45 2ej7_A HCG3 gene; HCG3 protein 21.3 59 0.002 21.9 2.5 29 56-84 5-33 (82)
46 3snr_A Extracellular ligand-bi 21.2 1.9E+02 0.0064 23.5 6.1 81 79-159 63-143 (362)
47 3hvm_A Agmatine deiminase; hyd 20.7 2.1E+02 0.0072 25.1 6.6 44 109-159 148-192 (330)
48 2pgd_A 6-phosphogluconate dehy 20.6 2E+02 0.007 25.9 6.7 68 15-94 5-77 (482)
49 2oyc_A PLP phosphatase, pyrido 20.4 80 0.0027 26.0 3.6 56 14-69 25-80 (306)
50 4fs3_A Enoyl-[acyl-carrier-pro 20.0 1E+02 0.0035 25.0 4.2 53 30-83 20-79 (256)
No 1
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=100.00 E-value=1.5e-59 Score=427.10 Aligned_cols=190 Identities=42% Similarity=0.751 Sum_probs=175.6
Q ss_pred CccccccccCC-CCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCC-cccHHHHHHHcCCCCCCCHHHHH
Q 027739 1 MIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSS-ACGSADVLEALGVVIDLDPEGVR 78 (219)
Q Consensus 1 ~~~~~~~~~~~-~~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ss-k~Gs~dvLeaLGi~~~~~~~~a~ 78 (219)
|++++.+++.+ ++.+|+|||||||.+||||||++|+++|++|+||+|||||+++| |+||+|+||+||++++.++++++
T Consensus 72 m~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~GsaDvLeaLGv~~~~~~~~~~ 151 (345)
T 1khd_A 72 LLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQAFGIRLDMSAEDSR 151 (345)
T ss_dssp HHHTSCCCCCCSSCCEEEEECCCCSSCBCCCHHHHHHHHHHHTCCEEEEECC---------CHHHHHTTCCTTCCHHHHH
T ss_pred HHHhCCcCCCCCCCeeeecCCCCCCCCccchHHHHHHHHHhCCCcEEEeCCCCCCCCcccHHHHHHhCCCCCCCCHHHHH
Confidence 57788877653 35899999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEE
Q 027739 79 RCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH 158 (219)
Q Consensus 79 ~~L~~~gi~fl~a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~ 158 (219)
++|++.||+|+++|.|||+|+++.++|++||+||+||++|||+||++++++|+|||||+|.+.++++++.+|.++++|||
T Consensus 152 ~~l~~~gi~fl~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL~nPa~~~~~v~GV~~~~~~~~~a~~l~~lG~~~a~vv~ 231 (345)
T 1khd_A 152 QALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVH 231 (345)
T ss_dssp HHHHHHSEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGGCCTTCCSEEEEECSSGGGHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHCCEEEEehhhhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCcCCCeEEEeecCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCccccCCCCceEEEEEeCCcEEEEEeccCc
Q 027739 159 SEGLDEMSPLGPGLILDVTQEKIERFSFDPCK 190 (219)
Q Consensus 159 GeG~dEls~~~~t~i~~v~~g~i~~~~l~P~d 190 (219)
|||+||+|++++|+++++++|++++|+|+|+|
T Consensus 232 GdG~dEis~~~~t~v~~~~~g~i~~~~i~p~~ 263 (345)
T 1khd_A 232 GGGMDEVAIHTPTQVAELNNGEIESYQLSPQD 263 (345)
T ss_dssp ETTBSSCCSSSCEEEEEEETTEEEEEEECGGG
T ss_pred CCCcceecCCCceEEEEEeCCEEEEEEECHHH
Confidence 99999999999999999999999999999974
No 2
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=100.00 E-value=2.7e-58 Score=422.74 Aligned_cols=190 Identities=39% Similarity=0.607 Sum_probs=176.1
Q ss_pred Cccccccc--------cCC---CCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCC
Q 027739 1 MIKYATKV--------EGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVV 69 (219)
Q Consensus 1 ~~~~~~~~--------~~~---~~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~ 69 (219)
|++++.++ +.+ .+.+|+|||||||.+||||||++|+|+|++|+||+|||||+++|++||+|+||+||++
T Consensus 86 m~~~~~~~~~~~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VaKHGnR~~ss~~GsaDvLEaLGv~ 165 (374)
T 1vqu_A 86 LQSQSKMGTGENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTAVAFVAAAYGVPVAKHGNRSASSLTGSADVLEALGVN 165 (374)
T ss_dssp HHTTCCC-----------CCSSSCCEEEEECC---CCBCCHHHHHHHHHHHTTCCEEEEEECC--CTTCHHHHHHHTTCC
T ss_pred HHHhCCccccccccccCccccCCCeeEEeCCCCCCCCccchHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHhCCCC
Confidence 56777766 333 3579999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHc
Q 027739 70 IDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRF 149 (219)
Q Consensus 70 ~~~~~~~a~~~L~~~gi~fl~a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~l 149 (219)
++.+++++++++++.||+|+++|.|||+|+++.++|++||+||+||++|||+||+++++||+|||||+|.++++++++.+
T Consensus 166 ~~~~~e~~~~~l~~~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfNilgpL~NPa~~~~qv~GV~~~~~~~~~a~~l~~l 245 (374)
T 1vqu_A 166 LGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNL 245 (374)
T ss_dssp TTCCHHHHHHHHHHTSEEEEEETTSSGGGGGGHHHHHHHCSCCHHHHHGGGCCTTCCSEEEEECSCGGGHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHCCEEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCCCCCceEEeecCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEe-CCccccCCCCceEEEEEeCCcEEEEEeccCc
Q 027739 150 GLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPCK 190 (219)
Q Consensus 150 G~~~alvv~G-eG~dEls~~~~t~i~~v~~g~i~~~~l~P~d 190 (219)
|.++++|||| ||+||+++.++|.|+++++|++++++|+|+|
T Consensus 246 G~~~alVv~G~~G~dE~s~~~~t~v~~~~~g~~~~~~i~p~d 287 (374)
T 1vqu_A 246 GKQKAIVLHGRERLDEAGLGDLTDLAVLSDGELQLTTINPQE 287 (374)
T ss_dssp TCSEEEEEEETTTBSSCCSSSCEEEEEEETTEEEEEEECGGG
T ss_pred CCCeEEEEECCCCccccccCCceEEEEEeCCEEEEEEECHHH
Confidence 9999999999 9999999999999999999999999999974
No 3
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=100.00 E-value=3.6e-58 Score=417.98 Aligned_cols=188 Identities=38% Similarity=0.639 Sum_probs=178.5
Q ss_pred CccccccccCCCCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCCCCHHHHHHH
Q 027739 1 MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRC 80 (219)
Q Consensus 1 ~~~~~~~~~~~~~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~~~~~~a~~~ 80 (219)
|++++.+++.+ +.+|+|||||||.+||||||++|+++|++ +||+|||||+++||+||+|+||+||++++.++++++++
T Consensus 62 m~~~~~~~~~~-~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~-v~VaKHGnR~~ss~~GsaDvLEaLGv~~~~~~e~~~~~ 139 (345)
T 1o17_A 62 MRELAIKIDVP-NAIDTAGTGGDGLGTVNVSTASAILLSLV-NPVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKEL 139 (345)
T ss_dssp HHHHSCCCCCT-TCEECCC----CCCBCCHHHHHHHHHTTT-SCEEEEECCCSSSSCSHHHHHHHHTBCCCCCHHHHHHH
T ss_pred HHHhCCCCCCC-CceeeCCCCCCCCCccchHHHHHHHHHHc-CCEEEECCCCCCCcccHHHHHHhCCCCCCCCHHHHHHH
Confidence 56777777654 68999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEEe-
Q 027739 81 VDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS- 159 (219)
Q Consensus 81 L~~~gi~fl~a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~G- 159 (219)
+++.||+|+++|.|||+|+++.++|++||+||+||++|||+||+++++|++|||||+|.++++++++.+|.++++||||
T Consensus 140 l~~~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfN~lgpL~nPa~~~~ql~Gv~~~~~~~~~A~~l~~lG~~~alVv~G~ 219 (345)
T 1o17_A 140 VNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGE 219 (345)
T ss_dssp HHHHSEEEEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGGCCTTCCSEEEEECSSHHHHHHHHHHHTTSCCSEEEEEEET
T ss_pred HHHcCEEEEehHHhChHHHHHHHHHHHhCCCCHHHHHHHhcCccCCCeEEEEeeCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCceEEEEEeCCcEEEEEeccCc
Q 027739 160 EGLDEMSPLGPGLILDVTQEKIERFSFDPCK 190 (219)
Q Consensus 160 eG~dEls~~~~t~i~~v~~g~i~~~~l~P~d 190 (219)
||+||+++.++|.++++++|+++++.|+|+|
T Consensus 220 ~G~dE~s~~~~t~v~~~~~g~~~~~~i~p~d 250 (345)
T 1o17_A 220 PGIDEVSPIGNTFMKIVSKRGIEEVKLNVTD 250 (345)
T ss_dssp TTBSSCCSSSEEEEEEEETTEEEEEEEEGGG
T ss_pred CCHHHhcccCCcEEEEEeCCeEEEEEEChhh
Confidence 9999999999999999999999999999985
No 4
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=100.00 E-value=7.4e-58 Score=413.59 Aligned_cols=185 Identities=46% Similarity=0.747 Sum_probs=178.0
Q ss_pred CccccccccCC-CCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCCCCHHHHHH
Q 027739 1 MIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRR 79 (219)
Q Consensus 1 ~~~~~~~~~~~-~~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~~~~~~a~~ 79 (219)
|++++.+++.+ .+.+|+|||||||.+|||+||++|+++|++|+||+|||||+++||+||+|+||+||++++.+++++++
T Consensus 59 m~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~GsaDvLeaLG~~~~~~~~~~~~ 138 (329)
T 2elc_A 59 MREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGE 138 (329)
T ss_dssp HHHHSCCCCCCCSSEEEEEECCCCSSCCCCCHHHHHHHHHHTTCEEEEEECCCTTTTCSHHHHHHHTTCCTTCCHHHHHH
T ss_pred HHHhCCCCCCCCCCeeEEcCCCCCCCCccccHHHHHHHHHhCCCCEEEeCCCCCCCcccHHHHHHhCCCCCCCCHHHHHH
Confidence 56777777654 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEEe
Q 027739 80 CVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS 159 (219)
Q Consensus 80 ~L~~~gi~fl~a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~G 159 (219)
++++.||+|+++|.|||+|+++.++|++||+||+||++|||+||+++++|++|||||+|.++++++++.+| ++++||||
T Consensus 139 ~l~~~g~~fl~a~~~hPa~k~~~~~R~~lg~rTvfn~lgpL~nPa~~~~~v~Gv~~~~~~~~~a~~l~~lG-~~alVv~G 217 (329)
T 2elc_A 139 AIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHG 217 (329)
T ss_dssp HHHHHSEEEEEHHHHCGGGGGTHHHHHHHCSCCHHHHHTTTCCTTCCCEEEEECSSGGGHHHHHHHHHHTT-CEEEEEEE
T ss_pred HHHHCCEEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHHhcCccCCceeEEeeeCHHHHHHHHHHHHHcC-CCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCccccCCCCceEEEEEeCCcEEEEEeccCc
Q 027739 160 EGLDEMSPLGPGLILDVTQEKIERFSFDPCK 190 (219)
Q Consensus 160 eG~dEls~~~~t~i~~v~~g~i~~~~l~P~d 190 (219)
||+||++ .++|.|+++++|+ ++++|+|
T Consensus 218 ~G~dE~~-~~~t~v~~~~~g~---~~i~p~~ 244 (329)
T 2elc_A 218 EGADELV-LGENRVVEVGKGA---YALTPEE 244 (329)
T ss_dssp TTBSSCC-SSCEEEEETTTEE---EEECGGG
T ss_pred CChhhhc-cCCeEEEEEECCE---EEECHHH
Confidence 9999999 9999999999887 8899985
No 5
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=100.00 E-value=8.3e-58 Score=415.47 Aligned_cols=190 Identities=49% Similarity=0.747 Sum_probs=168.7
Q ss_pred CccccccccCC--CCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCCCCHHHHH
Q 027739 1 MIKYATKVEGL--GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVR 78 (219)
Q Consensus 1 ~~~~~~~~~~~--~~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~~~~~~a~ 78 (219)
|++++.+++.+ .+.+|+|||||||.+||||||++|+++|++|+||+|||||++++|+||+|+||+||++++.++++++
T Consensus 65 m~~~~~~v~~~~~~~~vD~~gTGGdg~~t~niSt~~a~v~Aa~G~~V~khG~r~~ss~~GsaD~LeaLG~~~~ls~~~~~ 144 (346)
T 4hkm_A 65 MREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVA 144 (346)
T ss_dssp HHHHSCCCCCSCCTTEEEEECC------CCCHHHHHHHHHHHTTCEEEEEC---------CHHHHHTTTCCCCCCHHHHH
T ss_pred HHHhCCCCCCCCCccceeecCCCCCCccccCcHHHHHHHHHhcCCCeeecCCCCCCCCcCHHHHHHHcCCCcccCHHHHH
Confidence 56777777643 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEE
Q 027739 79 RCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH 158 (219)
Q Consensus 79 ~~L~~~gi~fl~a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~ 158 (219)
+++++.||+|+++|.|||+|+++.++|++||+||+||+++||+||++++++++|||||+|.++++++++.+|.++++|||
T Consensus 145 ~~l~~~g~~fl~a~~~~Pa~k~l~~~R~~lg~rT~fn~lgpL~nPa~~~~~v~Gv~~~~~~~~~a~~l~~lg~~~a~vv~ 224 (346)
T 4hkm_A 145 ASLAQTGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPLTNPAGSPNILMGVFHPDLVGIQARVLQELGAERALVVW 224 (346)
T ss_dssp HHHHHHSEEEECHHHHCGGGGGTHHHHHHHCSCCTHHHHGGGCCTTCCSEEEEECSSTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHhcCcchhchhhhChhHHHHhhheeccCCCchhhhcccccCCCCCcceEeeccCHHHhHHHHHHHHHcCCCeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCccccCCCCceEEEEEeCCcEEEEEeccCc
Q 027739 159 S-EGLDEMSPLGPGLILDVTQEKIERFSFDPCK 190 (219)
Q Consensus 159 G-eG~dEls~~~~t~i~~v~~g~i~~~~l~P~d 190 (219)
| ||+||+++.++|.++++++|++++++|+|+|
T Consensus 225 g~~G~dEis~~~~t~v~~~~~g~i~~~~i~P~d 257 (346)
T 4hkm_A 225 GRDGMDELSLGAGTLVGELRDGQVHEYEVHPED 257 (346)
T ss_dssp ETTTBSSCCSSSCEEEEEEETTEEEEEEECGGG
T ss_pred cCCCchhhhhccCceEEEEeCCceeEecCCHHH
Confidence 9 9999999999999999999999999999974
No 6
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=100.00 E-value=4.3e-57 Score=415.10 Aligned_cols=189 Identities=43% Similarity=0.695 Sum_probs=182.0
Q ss_pred CccccccccCC---CCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCCCCHHHH
Q 027739 1 MIKYATKVEGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGV 77 (219)
Q Consensus 1 ~~~~~~~~~~~---~~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~~~~~~a 77 (219)
|++++.+++.. .+.+|+|||||||.+||||||++|+|+|++|+||+|||||+++||+||+|+||+||++++.+++++
T Consensus 85 m~~~~~~v~~~~~~~~~vD~~gTGGdg~~T~niSt~~A~v~Aa~Gv~VaKHGnR~~ss~~GsaDvLEaLGv~~~l~~e~~ 164 (377)
T 3r88_A 85 MLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLV 164 (377)
T ss_dssp HHHHSCCCCTTCSCTTCEEEEECCCCSCCBCCHHHHHHHHHHHTTCCEEEEECCCSSSSCCHHHHHHHTTCCCCCCHHHH
T ss_pred HHHhCCcCCCccCCCCCeEEeCCCCCCcCccccHHHHHHHHHhcCCeEEeECCCCCCCcccHHHHHHHcCCCcccchHHH
Confidence 56777777643 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEE
Q 027739 78 RRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVV 157 (219)
Q Consensus 78 ~~~L~~~gi~fl~a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv 157 (219)
++++++.||+|+++|.|||+|+++.++|++||+||+||+++||+||+++++|++||||++|.+.++++++.+| ++++||
T Consensus 165 ~~~l~~~gi~fl~a~~~hPa~k~l~~vR~~Lg~rTifN~lgpL~NPa~~~~~liGv~~~~l~~~~a~~l~~~~-~~a~vv 243 (377)
T 3r88_A 165 ARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARR-SSVLVV 243 (377)
T ss_dssp HHHHHHHSEEEEEHHHHCGGGHHHHHHHHHHCSCCGGGGHHHHCCTTCCSEEEEECSCTTTHHHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHhccccccchhhCHHHHHHHHHHHHhccCchhhhHHHhcCcccccccccCCCCHHHhHHHHHHHHhcC-CeeEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 699999
Q ss_pred Ee-CCccccCCCCceEEEEEeCCcEEEEEeccCc
Q 027739 158 HS-EGLDEMSPLGPGLILDVTQEKIERFSFDPCK 190 (219)
Q Consensus 158 ~G-eG~dEls~~~~t~i~~v~~g~i~~~~l~P~d 190 (219)
|| ||+||+++.++|.++++++|++++++++|+|
T Consensus 244 ~G~dGlDEis~~~~t~v~~~~~g~i~~~~i~P~d 277 (377)
T 3r88_A 244 HGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAG 277 (377)
T ss_dssp EETTSCSSCCSSSCEEEEEEETTEEEEEEECGGG
T ss_pred cCCCCCceeecccccceEEEeeceeEEEeccccc
Confidence 99 9999999999999999999999999999975
No 7
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-37 Score=288.76 Aligned_cols=148 Identities=20% Similarity=0.250 Sum_probs=138.8
Q ss_pred CccccccccCCC--CceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHc-CCCCCCCHHHH
Q 027739 1 MIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDPEGV 77 (219)
Q Consensus 1 ~~~~~~~~~~~~--~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaL-Gi~~~~~~~~a 77 (219)
|++++.+++.+. ..+|+|||||||. |+||++|+++|++|+||+|||||+++|++||+|+||+| |++++.+++++
T Consensus 62 M~~~~~~l~~~~~~~~vD~~gTGGdG~---niSt~~a~vvAa~Gv~VaKhGnR~~ss~~GsaDvLEaL~Gv~i~l~~e~~ 138 (423)
T 2dsj_A 62 MARSGKVLDLSGLPHPVDKHSSGGVGD---KVSLVVGPILAASGCTFAKMSGRGLAHTGGTIDKLESVPGWRGEMTEAEF 138 (423)
T ss_dssp HHTSSBCCCCTTSSSBEEEEEESSSCC---STHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTTCCCCCCHHHH
T ss_pred HHHhCCcCCccccCCceeEecCCCCCc---cHHHHHHHHHHhCCCcEEEECCCCCCCCccHHHHHHhCCCCCCCCCHHHH
Confidence 677888876532 2799999999998 89999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHcCeeeeec-ccccHHhhhhHHHHhhcC-CCchhHhHhhccC---CCCCCeEEE------eec--ChhhHHHHHH
Q 027739 78 RRCVDEAGIGFMMS-TKYHPAMKFVRPVRKKLK-VKTVFNILGPMLN---PACVPFAVV------GVY--NENLVLKMAN 144 (219)
Q Consensus 78 ~~~L~~~gi~fl~a-~~~~P~l~~l~~lR~~Lg-~RT~fNtl~pLlN---P~~~~~~v~------Gv~--h~~~~~~~a~ 144 (219)
++++++.||+|+++ +.|||+++++.++|+++| +||+||+++||+| |++++++|+ |+| ++++.+.+++
T Consensus 139 ~~~l~~~Gi~f~~~~~~~~PA~k~l~~lR~~lgtv~Ti~nilgpl~nkK~pag~~~~vldV~~G~Gaf~~~~~~~~~lA~ 218 (423)
T 2dsj_A 139 LERARRVGLVIAAQSPDLAPLDGKLYALRDVTATVESVPLIASSIMSKKLAAGARSIVLDVKVGRGAFMKTLEEARLLAK 218 (423)
T ss_dssp HHHHHHTSEEEESCGGGBSHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTCSEEEEEEEESSSTTCBCHHHHHHHHH
T ss_pred HHHHHHcCEEEEecccccChHHHHHHHHHHHhcccCcHHHhHHHHhcCccCCCCCeEEEEeccCCCcccCCHHHHHHHHH
Confidence 99999999999877 799999999999999999 8999999999999 999999999 779 8999999999
Q ss_pred HHHHcCC
Q 027739 145 ALQRFGL 151 (219)
Q Consensus 145 ~l~~lG~ 151 (219)
++..+|.
T Consensus 219 ~l~~lg~ 225 (423)
T 2dsj_A 219 TMVAIGQ 225 (423)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998875
No 8
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-36 Score=279.28 Aligned_cols=145 Identities=28% Similarity=0.335 Sum_probs=136.2
Q ss_pred CccccccccCC---CCceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHc-CCCCCCCHHH
Q 027739 1 MIKYATKVEGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDPEG 76 (219)
Q Consensus 1 ~~~~~~~~~~~---~~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaL-Gi~~~~~~~~ 76 (219)
|++++.+++.+ .+.+|+|||||||.+| ||++|+++|++|+||+|||||++++++|++|+||+| |++++.++++
T Consensus 65 m~~~~~~~~~~~~~~~~vD~~gTGGdG~~t---St~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaLpGi~~~ls~e~ 141 (436)
T 3h5q_A 65 MVNSGDMIDLSDIKGVKVDKHSTGGVGDTT---TLVLAPLVAAVDVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEAT 141 (436)
T ss_dssp HHTTSCCCCCTTSCSCCEEEEECCCTTCCH---HHHHHHHHHHTTCCEEEECCCCSSSSCCHHHHHTTSTTCCCCCCHHH
T ss_pred HHHhCCcCCccccCCCceeecCCCCCCCCh---HHHHHHHHHhCCCCEEeECCCCCCCcccHHHHHHhCcCCCCCCCHHH
Confidence 56777777643 3689999999999987 999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCeeeee-cccccHHhhhhHHHHhhcCCCchhHhHhhccC--------CCCCCeEEEeec--------ChhhH
Q 027739 77 VRRCVDEAGIGFMM-STKYHPAMKFVRPVRKKLKVKTVFNILGPMLN--------PACVPFAVVGVY--------NENLV 139 (219)
Q Consensus 77 a~~~L~~~gi~fl~-a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlN--------P~~~~~~v~Gv~--------h~~~~ 139 (219)
+++++++.||+|++ ++.|||+++++.++|++ +||+||+ ||+| |++++++|+||+ +++..
T Consensus 142 ~~~~l~~~g~~fl~~a~~~~Pa~~~l~~lR~~--~~Tvfni--PLinaSimSKKlpag~~~~vlgV~~G~gaf~~~~~~a 217 (436)
T 3h5q_A 142 FVKLVNENKVAVVGQSGNLTPADKKLYALRDV--TGTVNSI--PLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDA 217 (436)
T ss_dssp HHHHHHHHSEEEECCCSSSCHHHHHHHHHHHT--TTCSSCH--HHHHHHHHHHHHHTTCSEEEEEEEESTTSSBCSHHHH
T ss_pred HHHHHHHcCCEEEccccccCHHHHHHHHHHhc--cCCcCCh--hhhccchhccccccCCCeEEEeeecCccccCCCHHHH
Confidence 99999999999998 79999999999999999 7999999 9999 999999999999 99999
Q ss_pred HHHHHHHHHcCCC
Q 027739 140 LKMANALQRFGLK 152 (219)
Q Consensus 140 ~~~a~~l~~lG~~ 152 (219)
+.+++++..+|.+
T Consensus 218 ~~lA~~l~~lG~~ 230 (436)
T 3h5q_A 218 EALAHAMVRIGNN 230 (436)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhh
Confidence 9999999988754
No 9
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=100.00 E-value=2.4e-35 Score=274.79 Aligned_cols=152 Identities=26% Similarity=0.354 Sum_probs=142.4
Q ss_pred CccccccccCCC---CceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHc-CCCCCCCHHH
Q 027739 1 MIKYATKVEGLG---DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDPEG 76 (219)
Q Consensus 1 ~~~~~~~~~~~~---~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaL-Gi~~~~~~~~ 76 (219)
|++++.+++.+. +.+|+|||||||.+ +||++|+++|++|+||+|||||++++++|++|+||+| |++++.++++
T Consensus 62 M~~~~~~v~~~~~~~~~vD~~gTGGdG~~---iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaL~Gv~i~ls~e~ 138 (433)
T 1brw_A 62 MVQSGEMLDLSSIRGVKVDKHSTGGVGDT---TTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVPGFHVEISKDE 138 (433)
T ss_dssp HHHTSCCCCCTTSCSCCEEEEECCCSSCC---HHHHHHHHHHTTTCCEEEEECCCBTTBCCHHHHHTTSTTCCCCCCHHH
T ss_pred HHHhCCcCCcccccCCceeeCCCCCCCcc---hHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHCcCceecCCHHH
Confidence 567777776532 58999999999996 9999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCeeeeec-ccccHHhhhhHHHHhhcCCCchhHhHhhccCC--------CCCCeEEEee------c------C
Q 027739 77 VRRCVDEAGIGFMMS-TKYHPAMKFVRPVRKKLKVKTVFNILGPMLNP--------ACVPFAVVGV------Y------N 135 (219)
Q Consensus 77 a~~~L~~~gi~fl~a-~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP--------~~~~~~v~Gv------~------h 135 (219)
+++++++.||+|+++ +.|||+|+++.++|+++ ||+||+ ||+|| .+++++|+|| | |
T Consensus 139 ~~~~l~~~Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PLin~s~lskklA~G~~~~VlgVk~G~gaf~~~~de~ 214 (433)
T 1brw_A 139 FIRLVNENGIAIIGQTGDLTPADKKLYALRDVT--ATVNSI--PLIASSIMSKKIAAGADAIVLDVKTGAGAFMKKLDEA 214 (433)
T ss_dssp HHHHHHHHSEEEEECCTTSCHHHHHHHHHHHHH--TCCCCH--HHHHHHHHHHHHHHCCSEEEEEEEESTTSSCCSHHHH
T ss_pred HHHHHHHcCeeEecCchhhCHHHHHHHHHHHhh--CCccCh--hhcCcHhhHHHHhcCCCEEEEEeecccccccCCHHHH
Confidence 999999999999999 59999999999999999 899999 99999 6888999999 8 8
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEe
Q 027739 136 ENLVLKMANALQRFGLKRALVVHS 159 (219)
Q Consensus 136 ~~~~~~~a~~l~~lG~~~alvv~G 159 (219)
+.+.+.+.++++.+|.++..++++
T Consensus 215 ~~l~~~~v~~~~~~G~~~~~~i~~ 238 (433)
T 1brw_A 215 RRLARVMVDIGKRVGRRTMAVISD 238 (433)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEEcC
Confidence 999999999999999999999995
No 10
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=100.00 E-value=5.8e-35 Score=274.56 Aligned_cols=152 Identities=25% Similarity=0.335 Sum_probs=142.8
Q ss_pred CccccccccCCC----CceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHc-CCCCCCCHH
Q 027739 1 MIKYATKVEGLG----DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDPE 75 (219)
Q Consensus 1 ~~~~~~~~~~~~----~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaL-Gi~~~~~~~ 75 (219)
|++++.+++.+. +.+|+|||||||.+ +||++|+++|++|+||+|||||+++|++||+|+||+| |++++.+++
T Consensus 89 Mr~~~~~v~~~~~~~~~~vD~~gTGGdG~~---iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GSaDvLEaLpGv~i~ls~e 165 (474)
T 1uou_A 89 LAQSGQQLEWPEAWRQQLVDKHSTGGVGDK---VSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPE 165 (474)
T ss_dssp HHTTSCCCCCCGGGGGGBEEEEESCCTTCC---HHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTTCCCCCCHH
T ss_pred HHHhCCcCCcccccCCCeeEeCCCCCCCce---eHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHhCCCCCCCCCHH
Confidence 577787776532 48999999999998 9999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHcCeeeeec-ccccHHhhhhHHHHhhcCCCchhHhHhhccCC--------CCCCeEEEee------c------
Q 027739 76 GVRRCVDEAGIGFMMS-TKYHPAMKFVRPVRKKLKVKTVFNILGPMLNP--------ACVPFAVVGV------Y------ 134 (219)
Q Consensus 76 ~a~~~L~~~gi~fl~a-~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP--------~~~~~~v~Gv------~------ 134 (219)
++++++++.||+|+++ +.|||+|+++.++|++ +||+||+ ||+|| .++.++|+|| |
T Consensus 166 ~~~~~l~~~Gi~fl~a~~~~hPA~k~l~~lR~~--lrTvfNi--PLinpsi~skklA~g~~~~VlgVk~G~gafm~~lde 241 (474)
T 1uou_A 166 QMQVLLDQAGCCIVGQSEQLVPADGILYAARDV--TATVDSL--PLITASILSKKLVEGLSALVVDVKFGGAAVFPNQEQ 241 (474)
T ss_dssp HHHHHHHHHSEEEECCCSSSSHHHHHHHHHHHH--TTCSSCH--HHHHHHHHHHHHHTTCSEEEEEEEEC--CCCCSHHH
T ss_pred HHHHHHHHcCeEEecCchhhCHHHHHHHHHHhh--hCCccch--hhcCcHHHHHHHhhcCCeEEEEeccccccccCCHHH
Confidence 9999999999999999 6999999999999999 4999999 99999 7889999999 8
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEe
Q 027739 135 NENLVLKMANALQRFGLKRALVVHS 159 (219)
Q Consensus 135 h~~~~~~~a~~l~~lG~~~alvv~G 159 (219)
|+.+.+.+.++++.+|.++.+++++
T Consensus 242 ~~~la~~~v~~~~~~G~~~~~vitd 266 (474)
T 1uou_A 242 ARELAKTLVGVGASLGLRVAAALTA 266 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEec
Confidence 8899999999999999999999996
No 11
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=100.00 E-value=1.4e-33 Score=263.31 Aligned_cols=152 Identities=23% Similarity=0.290 Sum_probs=135.0
Q ss_pred CccccccccCCC-----CceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHc-CCCCCCCH
Q 027739 1 MIKYATKVEGLG-----DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDP 74 (219)
Q Consensus 1 ~~~~~~~~~~~~-----~~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaL-Gi~~~~~~ 74 (219)
|++++.+++.+. +.+|+|||||||.+ +||++|+++|++|+||+|||||++++++||+|+||+| |++++.++
T Consensus 63 m~~~~~~~~~~~~~~~~~~vD~~gTGGdG~~---iSt~~A~vvAa~Gv~VaKHGnR~~ss~~GsaDvLEaL~Gv~~~ls~ 139 (440)
T 2tpt_A 63 MRDSGTVLDWKSLHLNGPIVDKHSTGGVGDV---TSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDD 139 (440)
T ss_dssp HHHTSBCCCCTTTTCSSCBEEEEECCCSSCC---HHHHHHHHHHHTTCBEEEEECCCCTTSCCHHHHHTTSTTCCSCCCH
T ss_pred HHHhCCcCCCcccccCCCeeeeCCCCCCCcc---HHHHHHHHHHhCCCcEEEECCCCCCCcccHHHHHHhCcCCCCCCCH
Confidence 567777776543 58999999999987 8999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHcCeeeeec-ccccHHhhhhHHHHhhcCCCchhHhHhhccCC--------CCCCeEEEeecC------hhhH
Q 027739 75 EGVRRCVDEAGIGFMMS-TKYHPAMKFVRPVRKKLKVKTVFNILGPMLNP--------ACVPFAVVGVYN------ENLV 139 (219)
Q Consensus 75 ~~a~~~L~~~gi~fl~a-~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP--------~~~~~~v~Gv~h------~~~~ 139 (219)
+++++++++.||+|+++ +.|||+|+++.++|+++ ||+||+ ||+|| .+++++|+||.| +.+.
T Consensus 140 e~~~~~l~~~G~~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PLin~s~lskk~A~G~~alVvdVk~G~gaf~~~~d 215 (440)
T 2tpt_A 140 NRFREIIKDVGVAIIGQTSSLAPADKRFYATRDIT--ATVDSI--PLITASILAKKLAEGLDALVMDVKVGSGAFMPTYE 215 (440)
T ss_dssp HHHHHHHHHTSEEEEECCTTBSHHHHHHHHHHHHT--TCCCCH--HHHHHHHHHHHHTTCCSEEEEEEEESTTSSSSSHH
T ss_pred HHHHHHHHHcCEEEEcCchhhCHHHHHHHHHHHhh--CCccCh--hhcCCHHHHHHHhcCCCeEEEEeccCCccccCCHH
Confidence 99999999999999999 79999999999999999 999999 99999 788899999944 4444
Q ss_pred HH------HHHHHHHcCCCeEEEEEe
Q 027739 140 LK------MANALQRFGLKRALVVHS 159 (219)
Q Consensus 140 ~~------~a~~l~~lG~~~alvv~G 159 (219)
+. +......+|.++..++++
T Consensus 216 e~~~la~t~v~~~~~~G~~~~a~itd 241 (440)
T 2tpt_A 216 LSEALAEAIVGVANGAGVRTTALLTD 241 (440)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCceEEEecC
Confidence 43 333447889988888884
No 12
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=61.50 E-value=13 Score=28.01 Aligned_cols=74 Identities=9% Similarity=0.102 Sum_probs=40.1
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEe-CCccccCCCCceEEEEEeC-CcEEEEEeccCcchhhhHHHHH---hhcceeeEE
Q 027739 135 NENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQ-EKIERFSFDPCKDLVTDLFYFL---FINSFLIVS 209 (219)
Q Consensus 135 h~~~~~~~a~~l~~lG~~~alvv~G-eG~dEls~~~~t~i~~v~~-g~i~~~~l~P~d~~~~~~~~~~---~~~~~~~~~ 209 (219)
++++.+.+.+.++..|...+.|++| +|.-.=..-...++.++.. --+.-..++++ +-+..++-.| +-++.+.++
T Consensus 28 g~pL~~~Iv~~~~~~GiaGaTV~rgi~GfG~~g~ih~~~~l~ls~dlPV~Ie~Vd~~-eki~~~l~~l~~~v~~Glvt~e 106 (114)
T 1o51_A 28 GKPLFEYLVKRAYELGMKGVTVYRGIMGFGHKRHMHRSDFFSLSPDLPIVLEIVDEE-ERINLFLKEIDNIDFDGLVFTA 106 (114)
T ss_dssp TEEHHHHHHHHHHHTTCSCCEEEECSCCCCC-------------CCCEEEEEEEECH-HHHHHHHHHHHTCCCCSEEEEE
T ss_pred CeEHHHHHHHHHHHCCCCeEEEEcCcEEECCCCCEEccceeecCCCCCEEEEEEcCH-HHHHHHHHHHHHHhCCCEEEEE
Confidence 5778889999999999999999999 8864444334556777764 44555556664 3444444222 224555543
No 13
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=51.21 E-value=31 Score=27.86 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=43.0
Q ss_pred ceeEeccCCCCCCCCcchHHHHH-HHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGASI-LAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~-vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~ 71 (219)
.+|+-||=.|+.+.+. .+..|+ -+.+.|++|+.=-|++--+..+..+.++.+|+++.
T Consensus 9 ~~DlDGTLl~~~~~i~-~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 9 LIDLDGTIYKGKSRIP-AGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EECCBTTTEETTEECH-HHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EEeCCCceEeCCEECc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 5889999888877774 444444 34566999998888776666678899999999864
No 14
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=48.92 E-value=58 Score=23.64 Aligned_cols=45 Identities=16% Similarity=0.031 Sum_probs=24.5
Q ss_pred HHHHhhcCCCchhHhHhhccC-CCCCCeEEEeecChhhHHHHHHHH
Q 027739 102 RPVRKKLKVKTVFNILGPMLN-PACVPFAVVGVYNENLVLKMANAL 146 (219)
Q Consensus 102 ~~lR~~Lg~RT~fNtl~pLlN-P~~~~~~v~Gv~h~~~~~~~a~~l 146 (219)
..+|++.|-.-+...+.+.+. ..+....+-|+.++...+.+.+.+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~dg~~~~~~~~~l~~~~ 99 (179)
T 3lw7_A 54 KRLREIYGDGVVARLCVEELGTSNHDLVVFDGVRSLAEVEEFKRLL 99 (179)
T ss_dssp HHHHHHHCTTHHHHHHHHHHCSCCCSCEEEECCCCHHHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHHHhcCCCeEEEeCCCCHHHHHHHHHHh
Confidence 334444555555555555552 223456777876666666555544
No 15
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=48.47 E-value=38 Score=30.20 Aligned_cols=111 Identities=27% Similarity=0.278 Sum_probs=72.6
Q ss_pred eccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCccc------HHHHHHH---------cCCCCCCCHHHHHHHHH
Q 027739 18 VGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACG------SADVLEA---------LGVVIDLDPEGVRRCVD 82 (219)
Q Consensus 18 ~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~G------s~dvLea---------LGi~~~~~~~~a~~~L~ 82 (219)
+..|.+|..|. .+.+++++.+|++|+--|+=+==.|.+ |+|+-|- -|+..-++.....+.||
T Consensus 126 ~a~~~~GaTTV---aaTm~lA~~AGI~VFaTGGIGGVHRgae~t~DISADL~eLarTpV~VVcAG~KSILDi~~TLE~LE 202 (335)
T 4gim_A 126 VAAGKNGATTV---ASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAASILDLGLTTEYLE 202 (335)
T ss_dssp HHTTCCEEECH---HHHHHHHHHTTCCEEECSCCCCBBTTHHHHCCBCHHHHHHHHSCCEEEECBCCTTBCHHHHHHHHH
T ss_pred hhcCCCccccH---HHHHHHHHHCCCcEEeeCCcCccCCCCCCCccccchHHHhccCCeEEEeecchhhccchhHHHHHH
Confidence 35566666554 234577888999999888655211211 6777663 45666688999999999
Q ss_pred HcCeeee-ecccccHH-------------------hhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecC
Q 027739 83 EAGIGFM-MSTKYHPA-------------------MKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYN 135 (219)
Q Consensus 83 ~~gi~fl-~a~~~~P~-------------------l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h 135 (219)
..|+.-+ |..+.+|+ ..++...|++||+.+-. -+.||....+++-.-.+
T Consensus 203 T~GVpVvgy~td~fPaFy~r~Sg~~~~~rvd~~~e~A~i~~~~~~lgl~~g~----lvanPIP~e~~i~~~~i 271 (335)
T 4gim_A 203 TFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARAMVVKWQSGLNGGL----VVANPIPEQFAMPEHTI 271 (335)
T ss_dssp HTTCCEEEETCSBCCBTTBSCCSSBCSEEECCHHHHHHHHHHHHHTTCCSCE----EEECCCCGGGCCCHHHH
T ss_pred hcCceEEEecCCCCceeeccCCCCcCcceeCCHHHHHHHHHHHHHcCCCCce----EEeCCCCchhcCCHHHH
Confidence 9998665 23333333 34567788899987632 45699877776644333
No 16
>4ex8_A ALNA; alpha/beta/alpha-domain, C-glycosynthase, divalent metal ION ligase; 2.10A {Streptomyces SP} PDB: 4ex9_A*
Probab=46.00 E-value=24 Score=31.23 Aligned_cols=122 Identities=21% Similarity=0.207 Sum_probs=79.4
Q ss_pred EeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCccc------HHHHHH---------HcCCCCCCCHHHHHHHH
Q 027739 17 IVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACG------SADVLE---------ALGVVIDLDPEGVRRCV 81 (219)
Q Consensus 17 i~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~G------s~dvLe---------aLGi~~~~~~~~a~~~L 81 (219)
++..|.+|..|. .+.+++++.+|++|+--|+=+-=.|.+ |+|+-| .-|+..-++.....+.|
T Consensus 105 ~~a~g~~GaTTV---aaTm~lA~~AGI~VFaTGGiGGVHRgae~t~DISaDL~eLarTpV~VVcaG~KsILDi~~TLE~L 181 (316)
T 4ex8_A 105 ALAGGGLGATTV---AGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQFRKTKMTVVSGGAKSILDHRLTAEYL 181 (316)
T ss_dssp HHHHCSCBEECH---HHHHHHHHHHTCCEEECSCBCCBBTTHHHHCCBCTHHHHTTTCCEEEEESBBCTTBCHHHHHHHH
T ss_pred HHhCCCCccccH---HHHHHHHHHCCCcEEEeCCccccCCCCCCCcchhhhHHHhcCCCeEEEecccchhhcchHHHHHH
Confidence 456677777664 234577778899999988755111211 677666 23677778999999999
Q ss_pred HHcCeeee-ecccccH------------------HhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHH
Q 027739 82 DEAGIGFM-MSTKYHP------------------AMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKM 142 (219)
Q Consensus 82 ~~~gi~fl-~a~~~~P------------------~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~ 142 (219)
+..|+.-+ |....+| ...+++..+++||+++-+ -+.||....+.+-+-.+ ...+
T Consensus 182 ET~GV~Vvgy~td~fPaFy~r~Sg~~~pr~d~~~e~A~~~~a~~~lgl~~g~----lvanPiP~e~~~~~~~i---~~~I 254 (316)
T 4ex8_A 182 ETAGVPVYGYRTDKLAAFVVREADVPVTRMDDLHTAARAAEAHWQVNGPGTV----LLTSPIDEQDAVDEAIV---EAAI 254 (316)
T ss_dssp HHTTCCEEEETCSBCCBTTBSCCSCBCEEESSHHHHHHHHHHHHHHHCSCEE----EEECCCCGGGCCCHHHH---HHHH
T ss_pred HhCCceEEEecCCCCceeeeCCCCCcCCCCCCHHHHHHHHHHHHHhCCCCeE----EEEcCCChhhcCCHHHH---HHHH
Confidence 99998776 3344555 345677788899988742 46799877766544333 3344
Q ss_pred HHHHHH
Q 027739 143 ANALQR 148 (219)
Q Consensus 143 a~~l~~ 148 (219)
.++++.
T Consensus 255 ~~Al~e 260 (316)
T 4ex8_A 255 AEALAQ 260 (316)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 17
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=43.86 E-value=20 Score=28.89 Aligned_cols=57 Identities=18% Similarity=0.183 Sum_probs=40.7
Q ss_pred ceeEeccCCCCCCCCcchHHHH-HHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGAS-ILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA-~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~ 71 (219)
.+|+-||=.|+.+... .+..| --+.+.|++|+.=-|++.-+..+..+.|+.+|+++.
T Consensus 12 ~~DlDGTLl~~~~~~~-~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 12 IIDIDGVIGKSVTPIP-EGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp EEECBTTTEETTEECH-HHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred EEcCcCcEECCCEeCc-CHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 5889898777766433 23333 344567999998777776666678889999999753
No 18
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=41.75 E-value=1e+02 Score=27.86 Aligned_cols=147 Identities=10% Similarity=0.010 Sum_probs=98.0
Q ss_pred eeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCC----CCcc---------c--HHHHHHHcCCCCCCCHHHHHH
Q 027739 15 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSS----SSAC---------G--SADVLEALGVVIDLDPEGVRR 79 (219)
Q Consensus 15 ~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~----ssk~---------G--s~dvLeaLGi~~~~~~~~a~~ 79 (219)
.=|+..|.+.-..+...--.+-.++++|..++|.|..-. ++.+ | .-|.++.++.+.+ ......+
T Consensus 30 ~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e-~~~~L~~ 108 (385)
T 1vli_A 30 FIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAE-WILPLLD 108 (385)
T ss_dssp EEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGG-GHHHHHH
T ss_pred EEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHH-HHHHHHH
Confidence 337765665555788888888889999999999996542 2222 1 1278888888764 5788888
Q ss_pred HHHHcCeeeeecccccHHhhhhHHHH---hhcCCCchhHh--HhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeE
Q 027739 80 CVDEAGIGFMMSTKYHPAMKFVRPVR---KKLKVKTVFNI--LGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRA 154 (219)
Q Consensus 80 ~L~~~gi~fl~a~~~~P~l~~l~~lR---~~Lg~RT~fNt--l~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~a 154 (219)
.-++.|+.|+..+-=..++..+..+. -++|=|..-|. +..+..=-.+=..=.|....+=.+..++.++.-|.++.
T Consensus 109 ~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~i 188 (385)
T 1vli_A 109 YCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQI 188 (385)
T ss_dssp HHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCE
T ss_pred HHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHCCCCcE
Confidence 88899999999888777777665441 24455555443 33333322233445677655556666777777787778
Q ss_pred EEEEe-CCc
Q 027739 155 LVVHS-EGL 162 (219)
Q Consensus 155 lvv~G-eG~ 162 (219)
++.|+ .++
T Consensus 189 iLlhc~s~Y 197 (385)
T 1vli_A 189 AIMHCVAKY 197 (385)
T ss_dssp EEEEECSSS
T ss_pred EEEeccCCC
Confidence 88887 654
No 19
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=40.40 E-value=82 Score=24.99 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=35.5
Q ss_pred ceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHH-cCCCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEA-LGVVID 71 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLea-LGi~~~ 71 (219)
.+|+-||=.|+...+.-..-+--.+.+.|+++..--+++..+.....+-|.. +|++..
T Consensus 9 ~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~ 67 (264)
T 1yv9_A 9 LIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVP 67 (264)
T ss_dssp EECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCC
T ss_pred EEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCC
Confidence 5788888888765553111122346678999987666665444334444445 999763
No 20
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=39.11 E-value=45 Score=29.64 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=44.8
Q ss_pred CceeEeccCCCCCC--CCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCC----------CCCHHHHHHH
Q 027739 13 DAVDIVGTGGDGAN--TVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI----------DLDPEGVRRC 80 (219)
Q Consensus 13 ~~~Di~GtggDg~~--t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~----------~~~~~~a~~~ 80 (219)
..|- ||+++++-+ ..-+--+.+.++...|.||..|-.++.... -..++|+..|++. ..+++.+++.
T Consensus 152 G~ik-ig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~-d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~ 229 (363)
T 3ovg_A 152 GIIK-AGTGYGAIDRLELKALEVAARTSILTGCPILVHTQLGTMAL-EVAKHLIGFGANPDKIQISHLNKNPDKYYYEKV 229 (363)
T ss_dssp CEEE-EEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHH-HHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHH
T ss_pred CEEE-EEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHH-HHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHH
Confidence 3453 465654322 233445566667778999999965431111 3457787778762 2468888888
Q ss_pred HHHcCeeeee
Q 027739 81 VDEAGIGFMM 90 (219)
Q Consensus 81 L~~~gi~fl~ 90 (219)
+++.| +|+.
T Consensus 230 l~~~G-~yI~ 238 (363)
T 3ovg_A 230 IKETG-VTLC 238 (363)
T ss_dssp HHHHC-CEEE
T ss_pred HHHCC-cEEE
Confidence 85556 4444
No 21
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=37.08 E-value=54 Score=25.71 Aligned_cols=58 Identities=19% Similarity=0.035 Sum_probs=37.6
Q ss_pred ceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~ 71 (219)
.+|+-||=.|+.+.+.-..-+--.+.+.|++++.--++.-.+.....+.++.+|++..
T Consensus 11 ~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~ 68 (259)
T 2ho4_A 11 LVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEIS 68 (259)
T ss_dssp EEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCC
T ss_pred EEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCcc
Confidence 5888899888776554333333456778999987665554444557788889998764
No 22
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=35.76 E-value=1.4e+02 Score=24.42 Aligned_cols=112 Identities=13% Similarity=0.081 Sum_probs=70.6
Q ss_pred EEeeCCCCCCCcccHHHHHHHcCCCCCCCHHHHHHHHHHcCeeeeecc----cccHHh----hhhHHHHhhcCCC--chh
Q 027739 45 VAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMST----KYHPAM----KFVRPVRKKLKVK--TVF 114 (219)
Q Consensus 45 V~kHG~~~~ssk~Gs~dvLeaLGi~~~~~~~~a~~~L~~~gi~fl~a~----~~~P~l----~~l~~lR~~Lg~R--T~f 114 (219)
|-.| .|-...+.-+.|-|.++ .....++.+.|++.|.-++-.+ .|.-.. +-...+++..+++ ++.
T Consensus 31 v~~h-~R~~~~~~~t~e~l~~~----~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~~~~ 105 (240)
T 3ixl_A 31 LPFI-ASGLGLGSVTPEGYDAV----IESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCTTMS 105 (240)
T ss_dssp SCEE-EEECCCCCSSHHHHHHH----GGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEEEHH
T ss_pred ceeE-eecccCCCCCHHHHHHH----HHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEECHH
Confidence 6778 66543233355666665 3467888899999898888665 231111 2234555556655 222
Q ss_pred HhHhhccCCCCC-CeEEEeecChhhHHHHHHHHHHcCCCeEEEEEeCCc
Q 027739 115 NILGPMLNPACV-PFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGL 162 (219)
Q Consensus 115 Ntl~pLlNP~~~-~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~GeG~ 162 (219)
-.+.+.+.-.+. +..|++-|-....+.+.+.++..|+ ..+.+.+.|.
T Consensus 106 ~A~~~al~~~g~~rvglltpy~~~~~~~~~~~l~~~Gi-ev~~~~~~~~ 153 (240)
T 3ixl_A 106 TAVLNGLRALGVRRVALATAYIDDVNERLAAFLAEESL-VPTGCRSLGI 153 (240)
T ss_dssp HHHHHHHHHTTCSEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEEECCC
T ss_pred HHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHHHCCC-EEeccccCCC
Confidence 223333333343 5778888888888999999999999 4777777554
No 23
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=34.04 E-value=75 Score=26.61 Aligned_cols=77 Identities=6% Similarity=-0.056 Sum_probs=51.9
Q ss_pred CCCHHHHHHHHHHcCeeeeeccccc-HHhhhhHHHHhhc--------CCCchhHhHhhccCCCCCCeEEEeecChhh---
Q 027739 71 DLDPEGVRRCVDEAGIGFMMSTKYH-PAMKFVRPVRKKL--------KVKTVFNILGPMLNPACVPFAVVGVYNENL--- 138 (219)
Q Consensus 71 ~~~~~~a~~~L~~~gi~fl~a~~~~-P~l~~l~~lR~~L--------g~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~--- 138 (219)
..+|.+.++.+++.|...++.-++. .....+..+.++. |+|+. .+..++ +++...++|-.--.-
T Consensus 37 ~~dp~~~A~~~~~~Ga~~l~vvDL~~~n~~~i~~i~~~~~~pv~vgGGir~~--~~~~~l--~Ga~~Viigs~a~~~~g~ 112 (260)
T 2agk_A 37 QHPSSYYAKLYKDRDVQGCHVIKLGPNNDDAAREALQESPQFLQVGGGINDT--NCLEWL--KWASKVIVTSWLFTKEGH 112 (260)
T ss_dssp CCCHHHHHHHHHHTTCTTCEEEEESSSCHHHHHHHHHHSTTTSEEESSCCTT--THHHHT--TTCSCEEECGGGBCTTCC
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeCCCCCHHHHHHHHhcCCceEEEeCCCCHH--HHHHHh--cCCCEEEECcHHHhhcCC
Confidence 3589999999998887766664443 2233455555543 78875 777888 888888999873222
Q ss_pred --HHHHHHHHHHcCC
Q 027739 139 --VLKMANALQRFGL 151 (219)
Q Consensus 139 --~~~~a~~l~~lG~ 151 (219)
.+++.++.+..|.
T Consensus 113 ~~p~~~~~~~~~~g~ 127 (260)
T 2agk_A 113 FQLKRLERLTELCGK 127 (260)
T ss_dssp BCHHHHHHHHHHHCG
T ss_pred CCHHHHHHHHHHhCc
Confidence 4666667777763
No 24
>2dcl_A Hypothetical UPF0166 protein PH1503; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; HET: AMP; 2.28A {Pyrococcus horikoshii}
Probab=34.03 E-value=50 Score=25.15 Aligned_cols=75 Identities=13% Similarity=0.198 Sum_probs=39.8
Q ss_pred cChhhHHHHHHHHHHcCCCeEEEEEe-CCccccCCCCceEEEEEeCC-cEEEEEeccCcchhhhHHHHH---hhcceeeE
Q 027739 134 YNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQE-KIERFSFDPCKDLVTDLFYFL---FINSFLIV 208 (219)
Q Consensus 134 ~h~~~~~~~a~~l~~lG~~~alvv~G-eG~dEls~~~~t~i~~v~~g-~i~~~~l~P~d~~~~~~~~~~---~~~~~~~~ 208 (219)
-|+++.+.+.+.++..|...+.|++| +|.-.=+.-...++..+..+ -+.-..++++ +-+..++-.| +=+|.+.+
T Consensus 23 ~g~pL~~~Iv~~a~~~GiaGaTV~rgi~GfG~~g~ih~~~~l~ls~dlPVvIe~Vd~~-eki~~~l~~l~~lv~~GlVt~ 101 (127)
T 2dcl_A 23 EGRPLYKVIVEKLREMGIAGATVYRGIYGFGKKSRVHSSDVIRLSTDLPIIVEVVDRG-HNIEKVVNVIKPMIKDGMITV 101 (127)
T ss_dssp TTEEHHHHHHHHHHHTTCSCEEEEECSEEEC--------------CCCEEEEEEEEEH-HHHHHHHHHHTTTCSSSEEEE
T ss_pred CCcCHHHHHHHHHHHCCCCeEEEEcCcEEECCCCCEecceeeecCCCCCEEEEEEcCH-HHHHHHHHHHHHHhCCCEEEE
Confidence 36788899999999999999999999 88644443345567777644 4454555554 3334443222 22455554
Q ss_pred E
Q 027739 209 S 209 (219)
Q Consensus 209 ~ 209 (219)
+
T Consensus 102 e 102 (127)
T 2dcl_A 102 E 102 (127)
T ss_dssp E
T ss_pred E
Confidence 3
No 25
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=33.77 E-value=39 Score=27.05 Aligned_cols=57 Identities=16% Similarity=-0.018 Sum_probs=38.9
Q ss_pred CceeEeccCCCCCCCCcchHHHH-HHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCC
Q 027739 13 DAVDIVGTGGDGANTVNISTGAS-ILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI 70 (219)
Q Consensus 13 ~~~Di~GtggDg~~t~NiSt~aA-~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~ 70 (219)
-++|+-||=.|+.+-.. .+..+ --+.+.|++++.-.|++--+.....+.++.+|++.
T Consensus 20 v~~DlDGTLl~~~~~~~-~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 20 FILDMDGTFYLDDSLLP-GSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp EEECCBTTTEETTEECT-THHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred EEEcCcCcEEeCCEECc-CHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 35889898777744222 22222 23677899999888776445556788999999975
No 26
>1j3m_A The conserved hypothetical protein TT1751; X-RAY crystallography, structural genomics, riken structural genomics/proteomics initiative; 2.00A {Thermus thermophilus} SCOP: d.129.7.1
Probab=31.66 E-value=1.1e+02 Score=22.38 Aligned_cols=60 Identities=23% Similarity=0.436 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcC
Q 027739 72 LDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFG 150 (219)
Q Consensus 72 ~~~~~a~~~L~~~gi~fl~a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG 150 (219)
...+..++.+++.||..+..-++... +++++|+. ..+++++++.+|.+...+-+.-...|
T Consensus 14 e~~~~l~~al~~~Gf~v~~~id~~~~------l~~k~g~~-------------~~~~~il~~cnP~~a~~~l~~~p~~g 73 (129)
T 1j3m_A 14 EARAQVEAALKEEGFGILTEIDVAAT------LKAKLGLE-------------KPPYLILGACNPNLAARALEALPEIG 73 (129)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEHHHH------HHHHHCCC-------------CCCEEEEEEECHHHHHHHHHHCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEEEeCHHHH------HHHhcCCC-------------CCCeEEEEECCHHHHHHHHHhCHHHH
Confidence 34566778888999998776444443 34455542 14789999999999988766554444
No 27
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=30.80 E-value=1.5e+02 Score=26.27 Aligned_cols=147 Identities=14% Similarity=0.124 Sum_probs=95.8
Q ss_pred ceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCC----CCcc--------c--HHHHHHHcCCCCCCCHHHHHH
Q 027739 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSS----SSAC--------G--SADVLEALGVVIDLDPEGVRR 79 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~----ssk~--------G--s~dvLeaLGi~~~~~~~~a~~ 79 (219)
+.=|.+.|.+.-..+...--.+-.++++|..++|.|..-. ++.+ | .-+.++.+|.+.+ ......+
T Consensus 20 ~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e-~~~~L~~ 98 (349)
T 2wqp_A 20 PLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEE-DEIKLKE 98 (349)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHH-HHHHHHH
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHH-HHHHHHH
Confidence 3337776665445777777788889999999999994332 2211 1 2388999998654 4566777
Q ss_pred HHHHcCeeeeecccccHHhhhhHHHH---hhcCCCchhHh--HhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeE
Q 027739 80 CVDEAGIGFMMSTKYHPAMKFVRPVR---KKLKVKTVFNI--LGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRA 154 (219)
Q Consensus 80 ~L~~~gi~fl~a~~~~P~l~~l~~lR---~~Lg~RT~fNt--l~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~a 154 (219)
.-++.|+.|+..+.=..++..+..+. -++|=|..-|. +..+..=-.+=..=.|...-+=....++.++.-|. +.
T Consensus 99 ~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~G~-~i 177 (349)
T 2wqp_A 99 YVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGV-PY 177 (349)
T ss_dssp HHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTC-CE
T ss_pred HHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHcCC-CE
Confidence 77789999999988888887776542 24555555543 33333222233444577655555666677777776 67
Q ss_pred EEEEe-CCc
Q 027739 155 LVVHS-EGL 162 (219)
Q Consensus 155 lvv~G-eG~ 162 (219)
++.|| .++
T Consensus 178 iLlhc~s~Y 186 (349)
T 2wqp_A 178 ALLHCTNIY 186 (349)
T ss_dssp EEEECCCCS
T ss_pred EEEeccCCC
Confidence 77787 654
No 28
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=29.87 E-value=1e+02 Score=22.10 Aligned_cols=37 Identities=16% Similarity=0.321 Sum_probs=32.5
Q ss_pred CCeEEEeecChhhHHHHHHHHHHcCCCeEEEEEeCCc
Q 027739 126 VPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGL 162 (219)
Q Consensus 126 ~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~GeG~ 162 (219)
-.+...|-|.+...+-+.++|..+|++.-+++++||.
T Consensus 19 ~n~V~TGgfg~~~v~ev~~am~~~g~~gkii~~~dGl 55 (85)
T 2l48_A 19 QNIIQSGAFSPYETPDVMGALTSLKMTADFILQSDGL 55 (85)
T ss_dssp CCCEEECCBCTTTHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred ceEEEecccCHHHHHHHHHHHHHcCceEEEEECCCce
Confidence 3678999999999999999999999987788877764
No 29
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=29.06 E-value=40 Score=27.19 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=36.7
Q ss_pred ceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI 70 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~ 70 (219)
.+|+-||=.|+...+.-+.-+---+.+.|++++.=-|++..+.....+-|+.+|++.
T Consensus 5 ~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~ 61 (263)
T 1zjj_A 5 IFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDV 61 (263)
T ss_dssp EEECBTTTEETTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCC
T ss_pred EEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 478888887776644322222233456799998777776555555566677789874
No 30
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=28.79 E-value=2.9e+02 Score=24.03 Aligned_cols=110 Identities=12% Similarity=0.125 Sum_probs=67.9
Q ss_pred eeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCCCCHHHHHHHHHHcCeeeeecccc
Q 027739 15 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKY 94 (219)
Q Consensus 15 ~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~~~~~~a~~~L~~~gi~fl~a~~~ 94 (219)
|-++|.|. +-...|..+++.|..|.... +. ....+-+.+.|+....+++++.+..++..+.++..|.-
T Consensus 25 IgiIGlG~-------mG~~~A~~L~~~G~~V~v~d-r~----~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~ 92 (358)
T 4e21_A 25 IGMIGLGR-------MGADMVRRLRKGGHECVVYD-LN----VNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA 92 (358)
T ss_dssp EEEECCSH-------HHHHHHHHHHHTTCEEEEEC-SC----HHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG
T ss_pred EEEECchH-------HHHHHHHHHHhCCCEEEEEe-CC----HHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH
Confidence 56778665 66677888889999988652 21 12345566779988888877755444448899888765
Q ss_pred cHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCC
Q 027739 95 HPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGL 151 (219)
Q Consensus 95 ~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~ 151 (219)
.+..+. .-+.+.+.|- .-..-.+-.+|......++.++..|.
T Consensus 93 --~v~~vl------------~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~ 134 (358)
T 4e21_A 93 --VVDSML------------QRMTPLLAAN-DIVIDGGNSHYQDDIRRADQMRAQGI 134 (358)
T ss_dssp --GHHHHH------------HHHGGGCCTT-CEEEECSSCCHHHHHHHHHHHHTTTC
T ss_pred --HHHHHH------------HHHHhhCCCC-CEEEeCCCCChHHHHHHHHHHHHCCC
Confidence 333322 2234444441 22222344556666777777777665
No 31
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=28.73 E-value=2.2e+02 Score=23.71 Aligned_cols=115 Identities=21% Similarity=0.183 Sum_probs=59.6
Q ss_pred hHHHHHHHHcCCCcEE-e---eCCCCC-----CC-cccHHHHHHHcCCCCC---C------CHHHHHHHHHHcCeeeeec
Q 027739 31 STGASILAAACGAKVA-K---QGSRSS-----SS-ACGSADVLEALGVVID---L------DPEGVRRCVDEAGIGFMMS 91 (219)
Q Consensus 31 St~aA~vlAa~Gv~V~-k---HG~~~~-----ss-k~Gs~dvLeaLGi~~~---~------~~~~a~~~L~~~gi~fl~a 91 (219)
|+.++.++.+.|+.|. + .+.+.. +. ..-...+-++||||.. . ..++..+.|++.|+.-+-.
T Consensus 17 Ss~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~~~~i~~vv~ 96 (237)
T 3rjz_A 17 SNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVEDLKRVLSGLKIQGIVA 96 (237)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHHHHHHHTTSCCSEEEC
T ss_pred HHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHHhcCCcEEEE
Confidence 6677888888998774 3 333211 11 1225778899999862 2 2455666777767655544
Q ss_pred ccccHHh--hhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEEe--CCccc
Q 027739 92 TKYHPAM--KFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS--EGLDE 164 (219)
Q Consensus 92 ~~~~P~l--~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~G--eG~dE 164 (219)
-++.-.- .++-.+=.++|+...+ |||.= +..+++.+. ...|+ ++++++- .|+|+
T Consensus 97 Gdi~s~yqr~r~e~vc~~~gl~~~~----PLW~~-------------d~~~Ll~e~-i~~G~-~aiiv~v~~~gL~~ 154 (237)
T 3rjz_A 97 GALASKYQRKRIEKVAKELGLEVYT----PAWGR-------------DAKEYMREL-LNLGF-KIMVVGVSAYGLDE 154 (237)
T ss_dssp C---CCSHHHHHHHHHHHTTCEEEC----SSSSC-------------CHHHHHHHH-HHTTC-EEEEEEEESTTCCG
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEc----cccCC-------------CHHHHHHHH-HHCCC-EEEEEEEecCCCCh
Confidence 4433211 2233333456666433 44431 223344443 35677 4666663 66654
No 32
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=28.35 E-value=27 Score=28.02 Aligned_cols=57 Identities=18% Similarity=0.132 Sum_probs=38.8
Q ss_pred ceeEeccCCCCCCCCcchHHHH-HHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGAS-ILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA-~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~ 71 (219)
.+|+-||=.|+.+... .+..| .-+.+.|++|+.=-+++.-+..+..+.++.+|+++.
T Consensus 10 ~~DlDGTLl~~~~~~~-~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 10 LIDLDGTMYNGTEKIE-EACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp EEECSSSTTCHHHHHH-HHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred EEeCcCceEeCCEeCc-cHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 5888898776633222 23333 334567999998766665566678899999999764
No 33
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=28.19 E-value=51 Score=28.94 Aligned_cols=58 Identities=17% Similarity=0.086 Sum_probs=39.2
Q ss_pred ceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHH-HcCCCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLE-ALGVVID 71 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLe-aLGi~~~ 71 (219)
.+|+-||=++|...+.=..-+--.|.+.|++++.--|.+..+..-.++-|+ .||+++.
T Consensus 17 l~D~DGvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~ 75 (352)
T 3kc2_A 17 AFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVS 75 (352)
T ss_dssp EECCBTTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCC
T ss_pred EEECCCeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCC
Confidence 589999999888755433333345667899999877765444444455555 7999864
No 34
>1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6
Probab=26.76 E-value=1.6e+02 Score=25.99 Aligned_cols=69 Identities=13% Similarity=0.017 Sum_probs=40.9
Q ss_pred hcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEE-e-CCccccCCCCceEEEEEeCCcEE
Q 027739 107 KLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-S-EGLDEMSPLGPGLILDVTQEKIE 182 (219)
Q Consensus 107 ~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~-G-eG~dEls~~~~t~i~~v~~g~i~ 182 (219)
.-|-.|++-|-.=|+||-+.+. -+-.+.-+++.+.||.++.+.+. | -..||-.-+-.+-+.-+.+|++-
T Consensus 152 ~dG~GTlltTe~clLn~nRNp~-------ls~~eie~~L~~~LGv~kviWL~~G~l~~DdTdgHiD~larFv~p~~vl 222 (349)
T 1zbr_A 152 TDGEGTLLTTDSCLFEPNRNAG-------LSRTAIIDTLKESLGVSRVLSLRHGALAGDDTDGHIDTLARFVDTRTIV 222 (349)
T ss_dssp BCSSSEEEEEHHHHTCTTTSTT-------SCHHHHHHHHHHHSCCSEEEEESSCCCTTCCSSSCGGGSEEEEETTEEE
T ss_pred ECCCceEEEeeeeeecCCcCCC-------CCHHHHHHHHHHHhCCcEEEEecCCccCCCCcCcchhheEEecCCCEEE
Confidence 3466677777777888865431 23344555555668999987777 3 22455444555555555566544
No 35
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=26.72 E-value=16 Score=26.89 Aligned_cols=50 Identities=12% Similarity=0.115 Sum_probs=31.1
Q ss_pred CCCCCCCHHHHHHHHHHcCeeeeecccc--cHHhhhhHHHHhhcCCCchhHh
Q 027739 67 GVVIDLDPEGVRRCVDEAGIGFMMSTKY--HPAMKFVRPVRKKLKVKTVFNI 116 (219)
Q Consensus 67 Gi~~~~~~~~a~~~L~~~gi~fl~a~~~--~P~l~~l~~lR~~Lg~RT~fNt 116 (219)
+.+-|..-.+|.+.|++.|+.|-....- .|.-..+..+-+++|++.+||+
T Consensus 11 ~~~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~~~g~~~l~n~ 62 (120)
T 2kok_A 11 GIKNCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKTVPWEQLLNR 62 (120)
T ss_dssp ECSSCHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHHHSCGGGTBCS
T ss_pred ECCCChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHHHcChHhhccC
Confidence 3455556678888899988887654322 2333556666667886554444
No 36
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=25.92 E-value=2.5e+02 Score=25.38 Aligned_cols=136 Identities=13% Similarity=0.052 Sum_probs=78.0
Q ss_pred ceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCC---------CCc--ccHHHHHHH----cCCCCCCCHHHHH
Q 027739 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSS---------SSA--CGSADVLEA----LGVVIDLDPEGVR 78 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~---------ssk--~Gs~dvLea----LGi~~~~~~~~a~ 78 (219)
-+-++|+|| +-++.|..+|+.|.+|....-+.. .+. -|..++++. -++..+.++++
T Consensus 10 ~~~vIGlG~-------vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~e-- 80 (446)
T 4a7p_A 10 RIAMIGTGY-------VGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAE-- 80 (446)
T ss_dssp EEEEECCSH-------HHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHH--
T ss_pred EEEEEcCCH-------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHH--
Confidence 366889888 668889999999999986653221 000 134444443 12444555544
Q ss_pred HHHHHcCeeeeecccccH---HhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCC-CeE
Q 027739 79 RCVDEAGIGFMMSTKYHP---AMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGL-KRA 154 (219)
Q Consensus 79 ~~L~~~gi~fl~a~~~~P---~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~-~~a 154 (219)
.+++..+.|+..|.=.- .--.+..+|+. ...+.+.+.|-. -.....-..|+..+.+++.++..+. ..+
T Consensus 81 -a~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v------~~~i~~~l~~g~-iVV~~STv~pgtt~~l~~~l~e~~~~~d~ 152 (446)
T 4a7p_A 81 -GVKDADAVFIAVGTPSRRGDGHADLSYVFAA------AREIAENLTKPS-VIVTKSTVPVGTGDEVERIIAEVAPNSGA 152 (446)
T ss_dssp -HHTTCSEEEECCCCCBCTTTCCBCTHHHHHH------HHHHHHSCCSCC-EEEECSCCCTTHHHHHHHHHHHHSTTSCC
T ss_pred -HHhcCCEEEEEcCCCCccccCCccHHHHHHH------HHHHHHhcCCCC-EEEEeCCCCchHHHHHHHHHHHhCCCCCc
Confidence 45677888887543210 01122333332 245666666532 1222233467888888888776542 356
Q ss_pred EEEEe-CCccccC
Q 027739 155 LVVHS-EGLDEMS 166 (219)
Q Consensus 155 lvv~G-eG~dEls 166 (219)
-++.| |...|-+
T Consensus 153 ~v~~~Pe~a~eG~ 165 (446)
T 4a7p_A 153 KVVSNPEFLREGA 165 (446)
T ss_dssp EEEECCCCCCTTS
T ss_pred eEEeCcccccccc
Confidence 77777 7766654
No 37
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=24.02 E-value=62 Score=26.24 Aligned_cols=56 Identities=18% Similarity=0.018 Sum_probs=39.0
Q ss_pred ceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVV 69 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~ 69 (219)
.+|+-||=+|+...+.-+.-+-.-+.+.|++++.=-|++..+.....+.++.+|++
T Consensus 18 ~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 18 FFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp EECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred EEcCcCCcCcCCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 58999998887664432222333456789999877666544445678889999998
No 38
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=23.60 E-value=74 Score=20.84 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=21.7
Q ss_pred HHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCCC
Q 027739 32 TGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (219)
Q Consensus 32 t~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~~ 71 (219)
+.||++|+..|. .++.--...+|++-|++++
T Consensus 4 ~yAallL~~~g~---------~~t~~~I~~il~aaGveve 34 (58)
T 3a1y_A 4 VYAALLLHSVGK---------EINEENLKAVLQAAGVEPE 34 (58)
T ss_dssp HHHHHHHHHTTC---------CCCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHhCCC---------CCCHHHHHHHHHHcCCCcc
Confidence 467888888872 2334446779999999875
No 39
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=22.92 E-value=15 Score=26.89 Aligned_cols=52 Identities=17% Similarity=0.135 Sum_probs=32.9
Q ss_pred CCCCCCCHHHHHHHHHHcCeeeeeccc--ccHHhhhhHHHHhhcCCCchhHhHh
Q 027739 67 GVVIDLDPEGVRRCVDEAGIGFMMSTK--YHPAMKFVRPVRKKLKVKTVFNILG 118 (219)
Q Consensus 67 Gi~~~~~~~~a~~~L~~~gi~fl~a~~--~~P~l~~l~~lR~~Lg~RT~fNtl~ 118 (219)
+.+-|..=.+|.+.|++.|+.|-.... -.|.-..+..+-+++|++.+||+=+
T Consensus 6 ~~~~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~~g~~~l~n~~~ 59 (114)
T 1rw1_A 6 GIKACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAEHGWQTVLNRAG 59 (114)
T ss_dssp ECSSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHHHCHHHHBCTTS
T ss_pred ECCCChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHhCChHHhccCCc
Confidence 345555567889999999998765433 2344456666667778554444433
No 40
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=22.44 E-value=1.3e+02 Score=22.01 Aligned_cols=54 Identities=19% Similarity=0.249 Sum_probs=37.0
Q ss_pred cCCCcEEeeCCCCCCCcccH---HHHHHHcCCCCCCCHHHHHHHHHHcCeeeeecccccHHh
Q 027739 40 ACGAKVAKQGSRSSSSACGS---ADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAM 98 (219)
Q Consensus 40 a~Gv~V~kHG~~~~ssk~Gs---~dvLeaLGi~~~~~~~~a~~~L~~~gi~fl~a~~~~P~l 98 (219)
+.|-+|+.|-..+. +|+|+ +-++..+|+ +.++|-+.+++......+-+.|.-.|
T Consensus 88 ~~~~~vlvHC~aG~-~RS~~~~~ayl~~~~~~----~~~~a~~~v~~~R~~~~pn~~f~~qL 144 (154)
T 2r0b_A 88 QMGGKVLVHGNAGI-SRSAAFVIAYIMETFGM----KYRDAFAYVQERRFCINPNAGFVHQL 144 (154)
T ss_dssp HTTCCEEEECSSSS-SHHHHHHHHHHHHHHTC----CHHHHHHHHHHHSTTCCCCHHHHHHH
T ss_pred hcCCCEEEEcCCCC-ChHHHHHHHHHHHHcCC----CHHHHHHHHHHHCCccCCCHHHHHHH
Confidence 46889999988776 57774 456667785 78889888888776444444443333
No 41
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=22.14 E-value=1.3e+02 Score=28.01 Aligned_cols=62 Identities=15% Similarity=0.027 Sum_probs=29.1
Q ss_pred CCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCCC----------CCCHHHHHHHHHHcCeeee
Q 027739 27 TVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI----------DLDPEGVRRCVDEAGIGFM 89 (219)
Q Consensus 27 t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~~----------~~~~~~a~~~L~~~gi~fl 89 (219)
..|+.-...+ +.+.|+..+.-|....+.....++.++++|+++ ..+...+++.+++.|+-..
T Consensus 109 y~d~~~ii~~-a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp 180 (540)
T 3glk_A 109 YANVELIVDI-AKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTL 180 (540)
T ss_dssp TTCHHHHHHH-HHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBC
T ss_pred cccHHHHHHH-HHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCC
Confidence 4454443333 334555555433222222223456677777653 2334445566666666533
No 42
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=21.94 E-value=1.2e+02 Score=22.23 Aligned_cols=49 Identities=10% Similarity=-0.066 Sum_probs=39.0
Q ss_pred CCcccHHHHHHHcCCCC---CCCHHHHHHHHHHcCeeeeecccccHHhhhhH
Q 027739 54 SSACGSADVLEALGVVI---DLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVR 102 (219)
Q Consensus 54 ssk~Gs~dvLeaLGi~~---~~~~~~a~~~L~~~gi~fl~a~~~~P~l~~l~ 102 (219)
..+....+.|+.+|+.+ +.+.++|.+.+++..+-.+......|.+.-+-
T Consensus 19 ~~~~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~DlvllDi~mP~~~G~e 70 (123)
T 2lpm_A 19 MIAMLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAIIDVNLDGEPSYP 70 (123)
T ss_dssp TTSHHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEECSSSSSCCSHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCHHH
Confidence 34556789999999975 36899999999999888888887778776543
No 43
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=21.76 E-value=31 Score=25.57 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=38.1
Q ss_pred CCCCCCCHHHHHHHHHHcCeeeee--cccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCC
Q 027739 67 GVVIDLDPEGVRRCVDEAGIGFMM--STKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVP 127 (219)
Q Consensus 67 Gi~~~~~~~~a~~~L~~~gi~fl~--a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~ 127 (219)
|.+-|.+-.+|.+.|++.|+.|-. ...=.|.-..|..+-+++|+. +..|+|.-+..
T Consensus 9 ~~~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~g~~-----~~~l~n~~~~~ 66 (120)
T 3fz4_A 9 EYPKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLENSGLE-----LKKFFNTSGQS 66 (120)
T ss_dssp ECSSCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHHSCCC-----GGGGBCTTSHH
T ss_pred eCCCChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHHcCCC-----HHHHhCCCCcc
Confidence 456666678899999999988754 444556677788888888753 44555554433
No 44
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=21.36 E-value=2.6e+02 Score=20.91 Aligned_cols=53 Identities=19% Similarity=0.197 Sum_probs=31.5
Q ss_pred chHHHHHHHHcCCCcEEeeCCCCCCCc--ccHHHHHHHcCC-----CCC-CCH--HHHHHHHH
Q 027739 30 ISTGASILAAACGAKVAKQGSRSSSSA--CGSADVLEALGV-----VID-LDP--EGVRRCVD 82 (219)
Q Consensus 30 iSt~aA~vlAa~Gv~V~kHG~~~~ssk--~Gs~dvLeaLGi-----~~~-~~~--~~a~~~L~ 82 (219)
++...+..+|+.|++|+.......... --..+.++++|+ +++ .++ +++++.++
T Consensus 28 p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~ 90 (157)
T 3gxh_A 28 PNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFA 90 (157)
T ss_dssp CCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHH
Confidence 456777888999999998754322111 124666777774 332 123 66665554
No 45
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.30 E-value=59 Score=21.93 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=24.7
Q ss_pred cccHHHHHHHcCCCCCCCHHHHHHHHHHc
Q 027739 56 ACGSADVLEALGVVIDLDPEGVRRCVDEA 84 (219)
Q Consensus 56 k~Gs~dvLeaLGi~~~~~~~~a~~~L~~~ 84 (219)
.++..|..+-||++...+.+++.++..+.
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l 33 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKL 33 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHH
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHH
Confidence 44567899999999999999999988875
No 46
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=21.23 E-value=1.9e+02 Score=23.54 Aligned_cols=81 Identities=11% Similarity=0.045 Sum_probs=44.3
Q ss_pred HHHHHcCeeeeecccccHHhhhhHHHHhhcCCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEE
Q 027739 79 RCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH 158 (219)
Q Consensus 79 ~~L~~~gi~fl~a~~~~P~l~~l~~lR~~Lg~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~ 158 (219)
+.+++.++..+..+...+....+.++-++.+++-+.-...++.....+..--++..+......+++.+..+|.++..++.
T Consensus 63 ~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ia~i~ 142 (362)
T 3snr_A 63 RFVTESKADVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKKNNVKTVGYIG 142 (362)
T ss_dssp HHHHTSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhccCceEEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHhcCCCEEEEEe
Confidence 33444467666665555555455555555666644321112211112233334555556667777778888888888886
Q ss_pred e
Q 027739 159 S 159 (219)
Q Consensus 159 G 159 (219)
.
T Consensus 143 ~ 143 (362)
T 3snr_A 143 Y 143 (362)
T ss_dssp E
T ss_pred c
Confidence 4
No 47
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=20.71 E-value=2.1e+02 Score=25.14 Aligned_cols=44 Identities=14% Similarity=0.041 Sum_probs=31.4
Q ss_pred CCCchhHhHhhccCCCCCCeEEEeecChhhHHHHHHHHHHcCCCeEEEEE-e
Q 027739 109 KVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-S 159 (219)
Q Consensus 109 g~RT~fNtl~pLlNP~~~~~~v~Gv~h~~~~~~~a~~l~~lG~~~alvv~-G 159 (219)
|-.|++-|-.-||||-+.+. -+-.+.=++..+.||.++.+-+. |
T Consensus 148 G~GTlltTe~clLn~nRNP~-------lsk~eiE~~L~~~LGv~kviWL~~G 192 (330)
T 3hvm_A 148 GAGSILTNTQCLLEKNRNPH-------LNQNGIETMLKKELGAKQVLWYSYG 192 (330)
T ss_dssp SSSEEEEEHHHHTCTTTSTT-------SCHHHHHHHHHHHHCCSEEEEECCC
T ss_pred CCceEEEEeehhcCCCCCCC-------CCHHHHHHHHHHHhCCCEEEEECCC
Confidence 66789999889999976432 13344455566678999988887 5
No 48
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=20.62 E-value=2e+02 Score=25.94 Aligned_cols=68 Identities=10% Similarity=0.032 Sum_probs=45.1
Q ss_pred eeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHH-----cCCCCCCCHHHHHHHHHHcCeeee
Q 027739 15 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEA-----LGVVIDLDPEGVRRCVDEAGIGFM 89 (219)
Q Consensus 15 ~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLea-----LGi~~~~~~~~a~~~L~~~gi~fl 89 (219)
|-|+|.|. +-...|..+++.|..|....-.. -..+-+.+ .|+....+++++.+.+++..+.++
T Consensus 5 IgvIG~G~-------mG~~lA~~La~~G~~V~v~dr~~-----~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVil 72 (482)
T 2pgd_A 5 IALIGLAV-------MGQNLILNMNDHGFVVCAFNRTV-----SKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIIL 72 (482)
T ss_dssp EEEECCSH-------HHHHHHHHHHHTTCCEEEECSST-----HHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEE
T ss_pred EEEEChHH-------HHHHHHHHHHHCCCeEEEEeCCH-----HHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEE
Confidence 45677654 56677888889999988663211 12233333 577767788877666667888888
Q ss_pred ecccc
Q 027739 90 MSTKY 94 (219)
Q Consensus 90 ~a~~~ 94 (219)
..|..
T Consensus 73 aVp~~ 77 (482)
T 2pgd_A 73 LVKAG 77 (482)
T ss_dssp CSCTT
T ss_pred eCCCh
Confidence 87764
No 49
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=20.41 E-value=80 Score=26.03 Aligned_cols=56 Identities=18% Similarity=0.013 Sum_probs=39.3
Q ss_pred ceeEeccCCCCCCCCcchHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCCC
Q 027739 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVV 69 (219)
Q Consensus 14 ~~Di~GtggDg~~t~NiSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi~ 69 (219)
.+|+-||=+|+...++-..-+---+.+.|++++.=-|++.-+.....+.++.+|++
T Consensus 25 ~~D~DGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 25 LFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp EECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred EECCCCcEecCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 58888988887664443333334466789999877666544555578889999997
No 50
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=20.01 E-value=1e+02 Score=25.04 Aligned_cols=53 Identities=25% Similarity=0.235 Sum_probs=34.3
Q ss_pred chHHHHHHHHcCCCcEEeeCCCCCCCcccHHHHHHHcCC------CCC-CCHHHHHHHHHH
Q 027739 30 ISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGV------VID-LDPEGVRRCVDE 83 (219)
Q Consensus 30 iSt~aA~vlAa~Gv~V~kHG~~~~ssk~Gs~dvLeaLGi------~~~-~~~~~a~~~L~~ 83 (219)
|--+.|..+|+.|.+|+.++-+. ...--.++.++++|- ..+ .+.+++++.+++
T Consensus 20 IG~aiA~~la~~Ga~Vvi~~r~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 20 IAFGVAKVLDQLGAKLVFTYRKE-RSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSG-GGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCH-HHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence 55677889999999999998542 111224666776652 222 467777766654
Done!