Your job contains 1 sequence.
>027740
MVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGK
IINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCP
VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD
GPTQWPLRNLEELLEELVAIAKVSKGKQRMNIDLTPFRD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027740
(219 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206375 - symbol:AtkdsA1 species:3702 "Arabido... 935 6.1e-94 1
TIGR_CMR|SPO_0947 - symbol:SPO_0947 "3-deoxy-8-phosphooct... 480 1.0e-45 1
TIGR_CMR|CBU_1675 - symbol:CBU_1675 "2-dehydro-3-deoxypho... 476 2.7e-45 1
TIGR_CMR|SO_3827 - symbol:SO_3827 "2-dehydro-3-deoxyphosp... 469 1.5e-44 1
TIGR_CMR|GSU_1894 - symbol:GSU_1894 "2-dehydro-3-deoxypho... 464 5.0e-44 1
TIGR_CMR|CPS_3547 - symbol:CPS_3547 "3-deoxy-8-phosphooct... 442 1.1e-41 1
UNIPROTKB|P0A715 - symbol:kdsA "3-deoxy-D-manno-octuloson... 422 1.4e-39 1
TIGR_CMR|CJE_0433 - symbol:CJE_0433 "3-deoxy-8-phosphooct... 407 5.5e-38 1
UNIPROTKB|Q9KQ29 - symbol:kdsA "2-dehydro-3-deoxyphosphoo... 402 1.9e-37 1
TIGR_CMR|VC_2175 - symbol:VC_2175 "2-dehydro-3-deoxyphosp... 402 1.9e-37 1
TIGR_CMR|BA_2958 - symbol:BA_2958 "chorismate mutase/phos... 197 2.7e-15 1
TIGR_CMR|CHY_1930 - symbol:CHY_1930 "phospho-2-dehydro-3-... 186 1.4e-14 1
TIGR_CMR|GSU_3142 - symbol:GSU_3142 "phospho-2-dehydro-3-... 183 8.1e-14 1
TIGR_CMR|DET_1486 - symbol:DET_1486 "phospho-2-dehydro-3-... 183 8.2e-14 1
TIGR_CMR|CHY_1037 - symbol:CHY_1037 "phospho-2-dehydro-3-... 178 1.0e-13 1
TIGR_CMR|GSU_3333 - symbol:GSU_3333 "phospho-2-dehydro-3-... 166 6.2e-12 1
TIGR_CMR|CHY_0475 - symbol:CHY_0475 "phospho-2-dehydro-3-... 163 1.4e-11 1
TIGR_CMR|CHY_1588 - symbol:CHY_1588 "phospho-2-dehydro-3-... 154 1.3e-10 1
TIGR_CMR|DET_0468 - symbol:DET_0468 "phospho-2-dehydro-3-... 150 2.9e-09 1
>TAIR|locus:2206375 [details] [associations]
symbol:AtkdsA1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IEA;ISS] [GO:0008152
"metabolic process" evidence=ISS] [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS;IDA]
[GO:0010306 "rhamnogalacturonan II biosynthetic process"
evidence=TAS] [GO:0009860 "pollen tube growth" evidence=IGI]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=IDA] [GO:0048868 "pollen tube development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR006218 InterPro:IPR006269 InterPro:IPR013785
Pfam:PF00793 EMBL:CP002684 GO:GO:0005829 Gene3D:3.20.20.70
KO:K01627 GO:GO:0008676 PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362
OMA:LCDRGTC IPI:IPI00938987 RefSeq:NP_001154477.1 UniGene:At.19978
ProteinModelPortal:F4IF58 SMR:F4IF58 PRIDE:F4IF58
EnsemblPlants:AT1G79500.5 GeneID:844288 KEGG:ath:AT1G79500
GO:GO:0010306 Uniprot:F4IF58
Length = 336
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 176/201 (87%), Positives = 187/201 (93%)
Query: 1 MVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGK 60
M EGLKILEKVK+AYD+PIVTDVHE+ QCE VGKVADIIQIPAFLCRQTDLLVAAA+TGK
Sbjct: 38 MAEGLKILEKVKVAYDLPIVTDVHESSQCEAVGKVADIIQIPAFLCRQTDLLVAAAQTGK 97
Query: 61 IINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCP 120
IINIKKGQFCA SVM NSAEK+RLAGNPNVMVCERGTMFGYNDLIVDPRN EWMREANCP
Sbjct: 98 IINIKKGQFCAPSVMENSAEKIRLAGNPNVMVCERGTMFGYNDLIVDPRNFEWMREANCP 157
Query: 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 180
VVAD+THSLQQPAGKKLDGGGVASGGLRELIPCIARTA+AVGVDG+FMEVHDDPL+APVD
Sbjct: 158 VVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHDDPLSAPVD 217
Query: 181 GPTQWPLRNXXXXXXXXVAIA 201
GPTQWPLR+ +AIA
Sbjct: 218 GPTQWPLRHLEELLEELIAIA 238
>TIGR_CMR|SPO_0947 [details] [associations]
symbol:SPO_0947 "3-deoxy-8-phosphooctulonate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019294 HOGENOM:HOG000023021
KO:K01627 OMA:HGLFIET ProtClustDB:PRK05198 UniPathway:UPA00357
GO:GO:0008676 PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362
RefSeq:YP_166200.1 ProteinModelPortal:Q5LUV5 GeneID:3195476
KEGG:sil:SPO0947 PATRIC:23375179 Uniprot:Q5LUV5
Length = 277
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 92/179 (51%), Positives = 118/179 (65%)
Query: 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIIN 63
GLK+L+ ++ +P++TDVH QC + D++QIPAFLCRQTD+L+AA TG +IN
Sbjct: 75 GLKVLDDIRRTMGVPVLTDVHSEAQCAIAAEAVDVLQIPAFLCRQTDMLLAAGNTGAVIN 134
Query: 64 IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVA 123
+KKGQF A M N +K+ GN N+++ ERG FGYN L+ D R L M + PVV
Sbjct: 135 VKKGQFLAPWEMGNIVDKIASTGNENILLTERGVSFGYNTLVADMRALPIMAQTGYPVVM 194
Query: 124 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 182
D THS+QQP G+ GG +SGG RE P +AR A+AVG VFME H DP NAP DGP
Sbjct: 195 DATHSVQQPGGR----GG-SSGGQREFAPVMARAAVAVGTAAVFMETHQDPDNAPCDGP 248
>TIGR_CMR|CBU_1675 [details] [associations]
symbol:CBU_1675 "2-dehydro-3-deoxyphosphooctonate
aldolase" species:227377 "Coxiella burnetii RSA 493" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0009103 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 RefSeq:NP_820657.1 ProteinModelPortal:Q83B43
PRIDE:Q83B43 GeneID:1209586 KEGG:cbu:CBU_1675 PATRIC:17932091
OMA:CAKLNIP BioCyc:CBUR227377:GJ7S-1646-MONOMER Uniprot:Q83B43
Length = 280
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 95/185 (51%), Positives = 116/185 (62%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
+GL ILEKVK ++PI+TDVHE +EV V D++Q PAFLCRQ++ + + A GK +
Sbjct: 73 KGLTILEKVKKTLEVPIITDVHEDTPLQEVAAVVDVLQTPAFLCRQSNFIRSVAACGKPV 132
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVV 122
NIKKGQF A M K GN +MVCERG FGYN+LI D R L +RE CPV+
Sbjct: 133 NIKKGQFLAPWEMKQVVAKAWATGNKKIMVCERGYSFGYNNLISDMRALAILRETACPVI 192
Query: 123 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 182
D THS+Q P G G SGG RE +P +AR A A G+ G+FME H DP A DGP
Sbjct: 193 FDATHSVQLPGGH-----GTNSGGQREFVPVLARAATAAGIAGIFMETHPDPDRALSDGP 247
Query: 183 TQWPL 187
WPL
Sbjct: 248 NSWPL 252
>TIGR_CMR|SO_3827 [details] [associations]
symbol:SO_3827 "2-dehydro-3-deoxyphosphooctonate aldolase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0009103 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 OMA:FNVPLIT RefSeq:NP_719360.1
ProteinModelPortal:Q8EAR9 SMR:Q8EAR9 PRIDE:Q8EAR9 GeneID:1171472
KEGG:son:SO_3827 PATRIC:23527340 Uniprot:Q8EAR9
Length = 282
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 93/187 (49%), Positives = 129/187 (68%)
Query: 1 MVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGK 60
M EGLKI E++K +++P++TDVHET QC V +V DIIQ+PAFL RQTDL+VA AKTG
Sbjct: 74 MEEGLKIFEEIKKTFNLPLITDVHETYQCAPVAEVVDIIQLPAFLARQTDLVVAMAKTGA 133
Query: 61 IINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCP 120
IIN+KK QF A M + K AGN +++CERG+ FGYN+L+VD ++ M+++ P
Sbjct: 134 IINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVDMLGMDEMKQSGYP 193
Query: 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 180
V+ D TH+LQ+P G+ D ++GG R +AR+ +A+G+ G+F+E H DP NA D
Sbjct: 194 VIFDATHALQRPGGRA-D----SAGGRRAQATELARSGMALGLAGLFIEAHPDPDNAKCD 248
Query: 181 GPTQWPL 187
GP PL
Sbjct: 249 GPCALPL 255
>TIGR_CMR|GSU_1894 [details] [associations]
symbol:GSU_1894 "2-dehydro-3-deoxyphosphooctonate
aldolase" species:243231 "Geobacter sulfurreducens PCA" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0009103 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 OMA:HGLFIET ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 RefSeq:NP_952943.1 ProteinModelPortal:P61655
SMR:P61655 GeneID:2686233 KEGG:gsu:GSU1894 PATRIC:22026653
BioCyc:GSUL243231:GH27-1922-MONOMER Uniprot:P61655
Length = 272
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 90/182 (49%), Positives = 123/182 (67%)
Query: 1 MVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGK 60
M EGL+IL+KVK + IP+++D+H Q + +V DIIQ+PAFLCRQTDL+V +T +
Sbjct: 73 MQEGLRILQKVKDSLGIPVISDIHSIEQVKPAAEVLDIIQVPAFLCRQTDLVVEVGRTNR 132
Query: 61 IINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCP 120
++N+KKGQF A M N K+ GN +++ ERG FGYN+L+ D R+L MR P
Sbjct: 133 VVNVKKGQFMAPWDMENVVGKILSTGNERIILTERGVTFGYNNLVSDMRSLPIMRRIGFP 192
Query: 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 180
VV D THS+Q P G+ GG +SGG RE + ++R A+A G+DG+FMEVH+DP A D
Sbjct: 193 VVFDATHSVQLPGGQ----GG-SSGGQREFVEYLSRAAVATGIDGIFMEVHEDPEKALCD 247
Query: 181 GP 182
GP
Sbjct: 248 GP 249
>TIGR_CMR|CPS_3547 [details] [associations]
symbol:CPS_3547 "3-deoxy-8-phosphooctulonate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0009103 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 RefSeq:YP_270221.1 HSSP:O66496
ProteinModelPortal:Q47Y99 SMR:Q47Y99 STRING:Q47Y99 PRIDE:Q47Y99
GeneID:3520710 KEGG:cps:CPS_3547 PATRIC:21470025 OMA:FNVPLIT
BioCyc:CPSY167879:GI48-3575-MONOMER Uniprot:Q47Y99
Length = 280
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 90/204 (44%), Positives = 131/204 (64%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EGLKI E++K +++PI+TDVHE+ Q + V +V D+IQ+PAFL RQTDL+VA AKTG +I
Sbjct: 76 EGLKIFEEIKSTFNVPIITDVHESYQAQPVSEVVDVIQLPAFLARQTDLVVAMAKTGAVI 135
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVV 122
N+KK QF A+ M + K AGN N+++CERG+ +GYN+L+VD ++ M+ PV+
Sbjct: 136 NVKKPQFLAAHEMKHIITKFGEAGNENIILCERGSCYGYNNLVVDMLAMDEMKNY-APVI 194
Query: 123 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 182
D TH+LQ+P G+ D ++ G R +AR+ +A+G+ G+F+E H DP A DGP
Sbjct: 195 FDATHALQKPGGRS-D----SADGRRAQAAQLARSGMAIGIAGLFIEAHPDPSAAKCDGP 249
Query: 183 TQWPLRNXXXXXXXXVAIAKVSKG 206
PL A+ + KG
Sbjct: 250 CALPLDKLEPYLAQMKALDDLVKG 273
>UNIPROTKB|P0A715 [details] [associations]
symbol:kdsA "3-deoxy-D-manno-octulosonate 8-phosphate
synthase" species:83333 "Escherichia coli K-12" [GO:0005829
"cytosol" evidence=IDA] [GO:0008676 "3-deoxy-8-phosphooctulonate
synthase activity" evidence=IEA;IDA] HAMAP:MF_00056
InterPro:IPR006218 InterPro:IPR006269 InterPro:IPR013785
Pfam:PF00793 UniPathway:UPA00030 GO:GO:0005829 Gene3D:3.20.20.70
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:U18555 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 ProtClustDB:PRK05198
UniPathway:UPA00357 GO:GO:0008676 PANTHER:PTHR21057:SF2
TIGRFAMs:TIGR01362 OMA:FNVPLIT EMBL:X05552 PIR:I83573
RefSeq:NP_415733.1 RefSeq:YP_489482.1 PDB:1D9E PDB:1G7U PDB:1G7V
PDB:1GG0 PDB:1PHQ PDB:1PHW PDB:1PL9 PDB:1Q3N PDB:1X6U PDB:1X8F
PDBsum:1D9E PDBsum:1G7U PDBsum:1G7V PDBsum:1GG0 PDBsum:1PHQ
PDBsum:1PHW PDBsum:1PL9 PDBsum:1Q3N PDBsum:1X6U PDBsum:1X8F
ProteinModelPortal:P0A715 SMR:P0A715 DIP:DIP-35940N IntAct:P0A715
MINT:MINT-1220797 SWISS-2DPAGE:P0A715 PaxDb:P0A715 PRIDE:P0A715
EnsemblBacteria:EBESCT00000001290 EnsemblBacteria:EBESCT00000001291
EnsemblBacteria:EBESCT00000014294 GeneID:12931123 GeneID:945785
KEGG:ecj:Y75_p1187 KEGG:eco:b1215 PATRIC:32117682 EchoBASE:EB0513
EcoGene:EG10518 BioCyc:EcoCyc:KDO-8PSYNTH-MONOMER
BioCyc:ECOL316407:JW1206-MONOMER BioCyc:MetaCyc:KDO-8PSYNTH-MONOMER
SABIO-RK:P0A715 EvolutionaryTrace:P0A715 Genevestigator:P0A715
Uniprot:P0A715
Length = 284
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 90/211 (42%), Positives = 128/211 (60%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EG+KI +++K + + I+TDVHE Q + V V D+IQ+PAFL RQTDL+ A AKTG +I
Sbjct: 76 EGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVI 135
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREA--NCP 120
N+KK QF + M N +K + GN V++C+RG FGY++L+VD M++ N P
Sbjct: 136 NVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSP 195
Query: 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 180
V+ DVTH+LQ D G ASGG R + +AR +AVG+ G+F+E H DP +A D
Sbjct: 196 VIFDVTHALQCR-----DPFGAASGGRRAQVAELARAGMAVGLAGLFIEAHPDPEHAKCD 250
Query: 181 GPTQWPLRNXXXXXXXXVAIAKVSKGKQRMN 211
GP+ PL AI + KG + ++
Sbjct: 251 GPSALPLAKLEPFLKQMKAIDDLVKGFEELD 281
>TIGR_CMR|CJE_0433 [details] [associations]
symbol:CJE_0433 "3-deoxy-8-phosphooctulonate synthase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0009103 RefSeq:YP_178452.1
ProteinModelPortal:Q5HW83 SMR:Q5HW83 STRING:Q5HW83 GeneID:3231195
KEGG:cjr:CJE0433 PATRIC:20042566 eggNOG:COG2877
HOGENOM:HOG000023021 KO:K01627 OMA:HGLFIET ProtClustDB:PRK05198
BioCyc:CJEJ195099:GJC0-438-MONOMER UniPathway:UPA00357
GO:GO:0008676 PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362
Uniprot:Q5HW83
Length = 271
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 96/191 (50%), Positives = 117/191 (61%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EGLKIL+ VK + + I+TD+HE+ Q V +VAD++QIPAFLCRQTDLLVAAAKT I
Sbjct: 61 EGLKILQSVKDEFGMKILTDIHESNQANPVSEVADVLQIPAFLCRQTDLLVAAAKTKAKI 120
Query: 63 NIKKGQFCASSVMVNSAEKV-----------RLAGNPNVMVCERGTMFGYNDLIVDPRNL 111
NIKKGQF S + S +KV A V V ERG FGY +L+VD R+L
Sbjct: 121 NIKKGQFLNPSDIKYSVKKVLQTRGIEDEGYEAAQRNGVFVAERGASFGYGNLVVDMRSL 180
Query: 112 EWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171
MRE PV+ D THS+Q P GG +SGG E + +AR A AVG+DG F E H
Sbjct: 181 VIMREF-APVIFDATHSVQMPGA----AGG-SSGGKSEFVEPLARAAAAVGIDGFFFETH 234
Query: 172 DDPLNAPVDGP 182
+P A DGP
Sbjct: 235 INPCEALCDGP 245
>UNIPROTKB|Q9KQ29 [details] [associations]
symbol:kdsA "2-dehydro-3-deoxyphosphooctonate aldolase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008676 "3-deoxy-8-phosphooctulonate synthase activity"
evidence=ISS] [GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid
biosynthetic process" evidence=ISS] HAMAP:MF_00056
InterPro:IPR006218 InterPro:IPR006269 InterPro:IPR013785
Pfam:PF00793 UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0019294
eggNOG:COG2877 KO:K01627 ProtClustDB:PRK05198 UniPathway:UPA00357
GO:GO:0008676 PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362 PIR:F82108
RefSeq:NP_231806.1 ProteinModelPortal:Q9KQ29 SMR:Q9KQ29
PRIDE:Q9KQ29 DNASU:2613311 GeneID:2613311 KEGG:vch:VC2175
PATRIC:20083363 OMA:LCDRGTC Uniprot:Q9KQ29
Length = 283
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 83/187 (44%), Positives = 117/187 (62%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EG+KI +++K + + I+TDVH Q + V V D+IQ+PAFL RQTDL+ A AKTG +I
Sbjct: 76 EGMKIFQELKETFGVKIITDVHTEAQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVI 135
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREAN--CP 120
N+KK QF + + N EK GN V++CERG+ GY++L+VD M++A+ P
Sbjct: 136 NVKKPQFMSPGQVGNIVEKFAECGNDKVILCERGSCHGYDNLVVDMLGFGVMKQASNGSP 195
Query: 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 180
++ DVTHSLQ D G ASGG RE +A+ +A G+ G+F+E H +P A D
Sbjct: 196 IIFDVTHSLQMR-----DPSGAASGGRREQTVELAKAGLATGIAGLFIEAHPNPDKARCD 250
Query: 181 GPTQWPL 187
GP+ PL
Sbjct: 251 GPSALPL 257
>TIGR_CMR|VC_2175 [details] [associations]
symbol:VC_2175 "2-dehydro-3-deoxyphosphooctonate aldolase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008676
"3-deoxy-8-phosphooctulonate synthase activity" evidence=ISS]
[GO:0019294 "keto-3-deoxy-D-manno-octulosonic acid biosynthetic
process" evidence=ISS] HAMAP:MF_00056 InterPro:IPR006218
InterPro:IPR006269 InterPro:IPR013785 Pfam:PF00793
UniPathway:UPA00030 GO:GO:0005737 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0019294 eggNOG:COG2877 KO:K01627
ProtClustDB:PRK05198 UniPathway:UPA00357 GO:GO:0008676
PANTHER:PTHR21057:SF2 TIGRFAMs:TIGR01362 PIR:F82108
RefSeq:NP_231806.1 ProteinModelPortal:Q9KQ29 SMR:Q9KQ29
PRIDE:Q9KQ29 DNASU:2613311 GeneID:2613311 KEGG:vch:VC2175
PATRIC:20083363 OMA:LCDRGTC Uniprot:Q9KQ29
Length = 283
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 83/187 (44%), Positives = 117/187 (62%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EG+KI +++K + + I+TDVH Q + V V D+IQ+PAFL RQTDL+ A AKTG +I
Sbjct: 76 EGMKIFQELKETFGVKIITDVHTEAQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVI 135
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREAN--CP 120
N+KK QF + + N EK GN V++CERG+ GY++L+VD M++A+ P
Sbjct: 136 NVKKPQFMSPGQVGNIVEKFAECGNDKVILCERGSCHGYDNLVVDMLGFGVMKQASNGSP 195
Query: 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 180
++ DVTHSLQ D G ASGG RE +A+ +A G+ G+F+E H +P A D
Sbjct: 196 IIFDVTHSLQMR-----DPSGAASGGRREQTVELAKAGLATGIAGLFIEAHPNPDKARCD 250
Query: 181 GPTQWPL 187
GP+ PL
Sbjct: 251 GPSALPL 257
>TIGR_CMR|BA_2958 [details] [associations]
symbol:BA_2958 "chorismate
mutase/phospho-2-dehydro-3-deoxyheptonate aldolase" species:198094
"Bacillus anthracis str. Ames" [GO:0003849
"3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS]
[GO:0009423 "chorismate biosynthetic process" evidence=ISS]
InterPro:IPR002701 InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 InterPro:IPR020822 Pfam:PF00793 Pfam:PF01817
PROSITE:PS51168 SMART:SM00830 Gene3D:3.20.20.70 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009073
GO:GO:0046417 Gene3D:1.20.59.10 GO:GO:0016832 HSSP:O66496
HOGENOM:HOG000023020 TIGRFAMs:TIGR01361 OMA:LQHIFKE
RefSeq:NP_845293.1 RefSeq:YP_019601.1 RefSeq:YP_029006.1
ProteinModelPortal:Q81P59 SMR:Q81P59 DNASU:1084724
EnsemblBacteria:EBBACT00000010412 EnsemblBacteria:EBBACT00000015134
EnsemblBacteria:EBBACT00000022680 GeneID:1084724 GeneID:2819977
GeneID:2852601 KEGG:ban:BA_2958 KEGG:bar:GBAA_2958 KEGG:bat:BAS2748
KO:K13853 ProtClustDB:PRK12595 BioCyc:BANT260799:GJAJ-2811-MONOMER
BioCyc:BANT261594:GJ7F-2920-MONOMER InterPro:IPR010954
TIGRFAMs:TIGR01801 Uniprot:Q81P59
Length = 358
Score = 197 (74.4 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 58/187 (31%), Positives = 89/187 (47%)
Query: 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKI 61
VEGL+IL +V +D+ I++++ E D+IQ+ A + DLL A K K
Sbjct: 168 VEGLQILRQVADEFDLAIISEILNPNDVEMALDYVDVIQVGARNMQNFDLLRAVGKVNKP 227
Query: 62 INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM----REA 117
+ +K+G +N+AE + GN +++CERG Y + ++ + +E
Sbjct: 228 VLLKRGLAATIDEFINAAEYIIAQGNDQIILCERGIRT-YERATRNTLDISAVPILKKET 286
Query: 118 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNA 177
+ PVV DVTHS G R+L+ A+ A+A+G D V EVH DP A
Sbjct: 287 HLPVVVDVTHST----------------GRRDLLLPTAKAALAIGADAVMAEVHPDPAVA 330
Query: 178 PVDGPTQ 184
D Q
Sbjct: 331 LSDSAQQ 337
>TIGR_CMR|CHY_1930 [details] [associations]
symbol:CHY_1930 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
RefSeq:YP_360749.1 ProteinModelPortal:Q3AAT5 SMR:Q3AAT5
STRING:Q3AAT5 GeneID:3726500 KEGG:chy:CHY_1930 PATRIC:21276951
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 OMA:GKAVGRW
ProtClustDB:PRK08673 BioCyc:CHYD246194:GJCN-1929-MONOMER
TIGRFAMs:TIGR01361 Uniprot:Q3AAT5
Length = 267
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 58/183 (31%), Positives = 90/183 (49%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EGLKIL + + +P+VT+V + E V + ADI+QI + + LL K +
Sbjct: 78 EGLKILARAREITGMPVVTEVLDPRDVEIVAQYADILQIGSRNMQNFTLLKEVGLINKPV 137
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREA----N 118
+K+G + +AE + AGN V++CERG + D + +L M A +
Sbjct: 138 LLKRGLAATLKEWLLAAEYIVAAGNEQVILCERGIRT-FEDYTRNTFDLAGMVAALDLTH 196
Query: 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAP 178
PV+AD +H+ G REL+ +A A+A G DG+ +EVH +P+ A
Sbjct: 197 LPVIADPSHAT----------------GRRELVGRVALGALAAGADGIMVEVHPEPVKAL 240
Query: 179 VDG 181
DG
Sbjct: 241 SDG 243
>TIGR_CMR|GSU_3142 [details] [associations]
symbol:GSU_3142 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:243231 "Geobacter sulfurreducens PCA" [GO:0003849
"3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS]
[GO:0009423 "chorismate biosynthetic process" evidence=ISS]
InterPro:IPR006218 InterPro:IPR006268 InterPro:IPR013785
Pfam:PF00793 Gene3D:3.20.20.70 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0009073 GO:GO:0016832
HOGENOM:HOG000023020 KO:K03856 ProtClustDB:PRK08673
TIGRFAMs:TIGR01361 RefSeq:NP_954183.1 ProteinModelPortal:Q747X3
SMR:Q747X3 GeneID:2688427 KEGG:gsu:GSU3142 PATRIC:22029143
OMA:QEFLMSA BioCyc:GSUL243231:GH27-3168-MONOMER Uniprot:Q747X3
Length = 339
Score = 183 (69.5 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 57/183 (31%), Positives = 88/183 (48%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EGLK+L K + +PIVT+V E V + +DI+QI A + LL + + +
Sbjct: 147 EGLKLLAKAREETGLPIVTEVVNPETAELVSEYSDILQIGARNAQNFALLKKVGQLRRPV 206
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--TMFGYNDLIVDPRNLEWMRE-ANC 119
+K+G + SAE V GN +V++CERG T +D + +++ +
Sbjct: 207 LLKRGMSMTIQEFLMSAEYVMSEGNQSVILCERGIRTFETATRNTLDLSAIPVLKQMTHL 266
Query: 120 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPV 179
PV+AD +H +G + P +A A+A G DG+ +EVH DP A
Sbjct: 267 PVIADPSHG---------------TGNYHYVAP-MALAAVAAGADGLMIEVHPDPERASS 310
Query: 180 DGP 182
DGP
Sbjct: 311 DGP 313
>TIGR_CMR|DET_1486 [details] [associations]
symbol:DET_1486 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 ProtClustDB:PRK08673
TIGRFAMs:TIGR01361 RefSeq:YP_182186.1 ProteinModelPortal:Q3Z6G3
SMR:Q3Z6G3 STRING:Q3Z6G3 GeneID:3229284 KEGG:det:DET1486
PATRIC:21609994 OMA:LQHIFKE BioCyc:DETH243164:GJNF-1487-MONOMER
Uniprot:Q3Z6G3
Length = 340
Score = 183 (69.5 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 60/181 (33%), Positives = 95/181 (52%)
Query: 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIIN 63
GLKILEKV+ + IVT+ ++ + V DIIQI A + LL A +T K +
Sbjct: 147 GLKILEKVRSETGLLIVTEATDSENLKLVEASTDIIQIGARNMQNYSLLRRAGQTKKPVI 206
Query: 64 IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM-FGYND-LIVDPRNLEWMRE-ANCP 120
+K+G ++ +AE + GN V++CERG F N +D + ++ ++ P
Sbjct: 207 LKRGLSATIEELLMAAEYIIAEGNTQVILCERGIRTFSDNTRFTLDLSAILSVKALSHLP 266
Query: 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 180
++ D +H+ AG++ D +IP ++R AIA G DG+ +EVH DP +A D
Sbjct: 267 IIVDPSHA----AGRR-D----------YVIP-LSRAAIATGADGLIVEVHSDPPSALSD 310
Query: 181 G 181
G
Sbjct: 311 G 311
>TIGR_CMR|CHY_1037 [details] [associations]
symbol:CHY_1037 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 TIGRFAMs:TIGR01361
ProtClustDB:CLSK742702 RefSeq:YP_359883.1 ProteinModelPortal:Q3ADA1
SMR:Q3ADA1 STRING:Q3ADA1 GeneID:3728886 KEGG:chy:CHY_1037
PATRIC:21275209 OMA:PHAGQPE BioCyc:CHYD246194:GJCN-1036-MONOMER
Uniprot:Q3ADA1
Length = 266
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/183 (29%), Positives = 89/183 (48%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EGLKIL ++K Y + +VT+V + E+ VADI+Q+ + + LL + K +
Sbjct: 74 EGLKILAEIKQKYGLIVVTEVLDEESLEKALPVADILQVGSRNMQNFSLLKKLGRVNKPV 133
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--TMFGYNDLIVDPRNLEWMREANCP 120
+K+G + + + GN +++CERG T +D + ++ CP
Sbjct: 134 LLKRGLAATIEEWLGAMAYIEEGGNHRIILCERGIRTFEKMTRNTLDISAVPLLKRL-CP 192
Query: 121 --VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAP 178
VV D +H+ AG+ +LIP +A+ A+A G DG+ +EVH +P A
Sbjct: 193 YPVVVDPSHA----AGRV------------DLIPALAKAAVAAGADGLLIEVHPEPQKAL 236
Query: 179 VDG 181
DG
Sbjct: 237 SDG 239
>TIGR_CMR|GSU_3333 [details] [associations]
symbol:GSU_3333 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:243231 "Geobacter sulfurreducens PCA" [GO:0003849
"3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS]
[GO:0009423 "chorismate biosynthetic process" evidence=ISS]
InterPro:IPR006218 InterPro:IPR006268 InterPro:IPR013785
Pfam:PF00793 Gene3D:3.20.20.70 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0009073 GO:GO:0016832
HOGENOM:HOG000023020 KO:K03856 ProtClustDB:PRK08673
TIGRFAMs:TIGR01361 RefSeq:NP_954373.4 ProteinModelPortal:Q747D4
GeneID:2687649 KEGG:gsu:GSU3333 PATRIC:22029519
BioCyc:GSUL243231:GH27-3252-MONOMER Uniprot:Q747D4
Length = 336
Score = 166 (63.5 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 53/180 (29%), Positives = 84/180 (46%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EGLK+L + +PIVT+V V + AD++Q+ A + +LL + K +
Sbjct: 146 EGLKLLAIARRETGLPIVTEVMSPDTVGLVAEYADLLQVGARNMQNFELLKELGRIRKPV 205
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVV 122
+K+G + +AE + GN V++CERG RN + A P++
Sbjct: 206 LLKRGMSATLEEFLAAAEYILAEGNGQVILCERGI----RTFETATRNT--LDLAVVPLI 259
Query: 123 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 182
++TH P +D G R L+ +A+ A+ G GV +EVH +P A DGP
Sbjct: 260 REMTHL---PV--MVDPSHAT--GKRSLVAPMAKAALVAGAHGVLVEVHPEPDKALSDGP 312
>TIGR_CMR|CHY_0475 [details] [associations]
symbol:CHY_0475 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 TIGRFAMs:TIGR01361
RefSeq:YP_359333.1 ProteinModelPortal:Q3AEV1 SMR:Q3AEV1
STRING:Q3AEV1 GeneID:3726615 KEGG:chy:CHY_0475 PATRIC:21274103
OMA:GGPCTVE BioCyc:CHYD246194:GJCN-476-MONOMER Uniprot:Q3AEV1
Length = 336
Score = 163 (62.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/183 (29%), Positives = 91/183 (49%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
EG+ IL+++ Y + VT+V E E V + DI+Q+ A + LL ++ +
Sbjct: 144 EGVIILQEIGQEYGLITVTEVLEAKDVEFVAERIDILQVGARNMQNFALLKELSQVENPV 203
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--TMFGYNDLIVDPRNLEWMRE-ANC 119
+K+G + +AE + GN V++CERG T +D + +++ ++
Sbjct: 204 ILKRGLSATIEEWLLAAEYLLSGGNQKVILCERGIRTFETATRNTLDLSAVALVKQLSHL 263
Query: 120 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPV 179
PV+ D +H+ GK RELI ++R A+A+G DG+ +EVH +P A
Sbjct: 264 PVIVDPSHA----TGK------------RELILPLSRAALALGADGLMIEVHPEPEKALS 307
Query: 180 DGP 182
DGP
Sbjct: 308 DGP 310
>TIGR_CMR|CHY_1588 [details] [associations]
symbol:CHY_1588 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 TIGRFAMs:TIGR01361
RefSeq:YP_360417.1 ProteinModelPortal:Q3ABR7 SMR:Q3ABR7
STRING:Q3ABR7 GeneID:3727505 KEGG:chy:CHY_1588 PATRIC:21276301
OMA:NTGYVDD ProtClustDB:CLSK742702
BioCyc:CHYD246194:GJCN-1587-MONOMER Uniprot:Q3ABR7
Length = 270
Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/182 (26%), Positives = 85/182 (46%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
E LK L K + +VT+V + + VADI+Q+ + + LL AK K +
Sbjct: 78 EALKYLALAKAETGLLVVTEVIDEDSLNKALPVADILQVGSRNMQNYALLKLLAKVDKPV 137
Query: 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--TMFGYNDLIVDPRNLEWMREAN-C 119
+K+G + + + GN +++CERG T +D + +++
Sbjct: 138 LLKRGLAATLEEWLGAVAYLEKGGNRKIILCERGIRTFETMTRNTLDISAVPLLKKLTPY 197
Query: 120 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPV 179
PV+ D +H+ AG+ R++IP +A+ A+A G DG+ +E+H +P A
Sbjct: 198 PVIVDPSHA----AGR------------RDIIPSLAKAAVAAGADGLLIEIHPEPERALS 241
Query: 180 DG 181
DG
Sbjct: 242 DG 243
>TIGR_CMR|DET_0468 [details] [associations]
symbol:DET_0468 "phospho-2-dehydro-3-deoxyheptonate
aldolase" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] InterPro:IPR006218 InterPro:IPR006268
InterPro:IPR013785 Pfam:PF00793 Gene3D:3.20.20.70 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0009073 GO:GO:0003849 GO:GO:0016832
eggNOG:COG2876 HOGENOM:HOG000023020 KO:K03856 ProtClustDB:PRK08673
TIGRFAMs:TIGR01361 RefSeq:YP_181212.1 ProteinModelPortal:Q3Z987
STRING:Q3Z987 GeneID:3230167 KEGG:det:DET0468 PATRIC:21608005
OMA:MAVMTEI BioCyc:DETH243164:GJNF-468-MONOMER Uniprot:Q3Z987
Length = 351
Score = 150 (57.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 53/188 (28%), Positives = 91/188 (48%)
Query: 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKII 62
E L L++ +++ ++T++ Q + V + DI+Q+ + DLL A+ GK +
Sbjct: 157 EALSWLKEAGERFEMAVMTEIRGESQADLVAEYVDILQVGSRNMYDQDLLATVARKGKPV 216
Query: 63 NIKKGQFCAS-SVMVNSAEKVRLAGNPNVMVCERGTM-FG-------YN-DLIVDPRNLE 112
K+ F AS ++ AE + GN ++++CERG + G YN DL P L
Sbjct: 217 MYKR-HFGASMEEFLSFAEYIAAEGNKDIILCERGIVPVGKGKNFTRYNLDLAAVPVAL- 274
Query: 113 WMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 172
+E P++ D +H+ G R+LI ++ A+A G +G+ +EVH
Sbjct: 275 --KETYLPIMVDPSHAT----------------GRRDLIYSMSCAAMAAGANGLMIEVHT 316
Query: 173 DPLNAPVD 180
+P A VD
Sbjct: 317 NPAEALVD 324
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 219 211 0.00081 112 3 11 22 0.50 32
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 606 (64 KB)
Total size of DFA: 170 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.32u 0.13s 17.45t Elapsed: 00:00:01
Total cpu time: 17.32u 0.13s 17.45t Elapsed: 00:00:01
Start: Sat May 11 07:30:35 2013 End: Sat May 11 07:30:36 2013