Query 027740
Match_columns 219
No_of_seqs 133 out of 1085
Neff 6.0
Searched_HMMs 29240
Date Tue Mar 26 00:47:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027740.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027740hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sz8_A 2-dehydro-3-deoxyphosph 100.0 1.1E-63 3.8E-68 443.4 19.0 204 2-210 77-282 (285)
2 3tml_A 2-dehydro-3-deoxyphosph 100.0 1.9E-63 6.4E-68 442.7 14.3 208 2-214 74-287 (288)
3 3fs2_A 2-dehydro-3-deoxyphosph 100.0 1.5E-62 5.2E-67 438.2 15.4 199 2-205 98-296 (298)
4 2qkf_A 3-deoxy-D-manno-octulos 100.0 4.8E-61 1.7E-65 426.1 14.5 207 2-213 72-280 (280)
5 1o60_A 2-dehydro-3-deoxyphosph 100.0 4.9E-60 1.7E-64 421.8 15.9 205 2-211 75-281 (292)
6 2nwr_A 2-dehydro-3-deoxyphosph 100.0 9.4E-58 3.2E-62 402.6 17.7 205 1-211 60-265 (267)
7 2wqp_A Polysialic acid capsule 100.0 1.3E-55 4.6E-60 401.3 20.6 182 2-209 90-276 (349)
8 1vs1_A 3-deoxy-7-phosphoheptul 100.0 9.2E-56 3.1E-60 391.6 18.0 185 2-202 88-275 (276)
9 1vli_A Spore coat polysacchari 100.0 5.5E-55 1.9E-59 401.2 20.8 184 2-209 100-301 (385)
10 1vr6_A Phospho-2-dehydro-3-deo 100.0 4.6E-55 1.6E-59 398.0 19.7 189 2-206 156-347 (350)
11 1zco_A 2-dehydro-3-deoxyphosph 100.0 5.5E-54 1.9E-58 377.5 20.5 185 2-202 73-260 (262)
12 3nvt_A 3-deoxy-D-arabino-heptu 100.0 1.7E-54 5.8E-59 398.8 17.9 189 2-206 192-383 (385)
13 3g8r_A Probable spore coat pol 100.0 1.2E-53 4.1E-58 388.4 21.1 183 2-208 77-263 (350)
14 1n8f_A DAHP synthetase; (beta/ 100.0 1.4E-35 4.8E-40 269.0 11.5 169 1-187 119-314 (350)
15 1of8_A Phospho-2-dehydro-3-deo 100.0 1.4E-33 4.8E-38 257.0 10.2 169 2-193 135-334 (370)
16 3tqk_A Phospho-2-dehydro-3-deo 99.9 4.6E-23 1.6E-27 185.9 7.9 160 2-173 117-303 (346)
17 1eye_A DHPS 1, dihydropteroate 96.9 0.018 6E-07 50.5 13.5 175 6-205 71-272 (280)
18 1aj0_A DHPS, dihydropteroate s 96.8 0.038 1.3E-06 48.4 15.0 118 6-126 80-219 (282)
19 1vzw_A Phosphoribosyl isomeras 96.8 0.0051 1.8E-07 51.4 8.9 139 6-172 65-225 (244)
20 2dqw_A Dihydropteroate synthas 96.8 0.031 1.1E-06 49.4 13.9 149 6-171 94-270 (294)
21 1y0e_A Putative N-acetylmannos 96.8 0.028 9.7E-07 46.1 13.0 139 4-171 44-206 (223)
22 3zwt_A Dihydroorotate dehydrog 96.7 0.022 7.6E-07 51.5 13.1 116 58-205 219-353 (367)
23 2y88_A Phosphoribosyl isomeras 96.7 0.0047 1.6E-07 51.5 7.9 142 6-171 64-227 (244)
24 1h5y_A HISF; histidine biosynt 96.7 0.0091 3.1E-07 49.3 9.4 143 4-173 65-231 (253)
25 2v82_A 2-dehydro-3-deoxy-6-pho 96.7 0.05 1.7E-06 44.4 13.7 130 4-174 45-181 (212)
26 3igs_A N-acetylmannosamine-6-p 96.6 0.074 2.5E-06 44.9 15.0 141 4-173 57-214 (232)
27 3q58_A N-acetylmannosamine-6-p 96.5 0.078 2.7E-06 44.7 14.4 141 4-173 57-214 (229)
28 1ka9_F Imidazole glycerol phos 96.4 0.0093 3.2E-07 49.9 8.0 155 5-194 64-242 (252)
29 3bw2_A 2-nitropropane dioxygen 96.4 0.054 1.8E-06 48.4 13.3 139 4-173 85-241 (369)
30 2vp8_A Dihydropteroate synthas 96.3 0.081 2.8E-06 47.2 13.9 166 6-206 106-307 (318)
31 1tx2_A DHPS, dihydropteroate s 96.3 0.097 3.3E-06 46.2 14.3 119 5-126 104-238 (297)
32 1thf_D HISF protein; thermophI 96.3 0.016 5.6E-07 48.4 9.0 142 4-172 62-227 (253)
33 3qja_A IGPS, indole-3-glycerol 96.3 0.15 5.1E-06 44.2 15.1 135 5-172 102-245 (272)
34 2w6r_A Imidazole glycerol phos 96.2 0.061 2.1E-06 45.3 12.1 141 5-172 63-232 (266)
35 1xi3_A Thiamine phosphate pyro 96.2 0.26 9E-06 39.6 15.1 149 5-199 59-212 (215)
36 4e38_A Keto-hydroxyglutarate-a 96.1 0.045 1.5E-06 46.7 10.3 133 3-176 71-209 (232)
37 2tps_A Protein (thiamin phosph 96.0 0.19 6.3E-06 41.1 13.6 149 5-200 67-223 (227)
38 2vef_A Dihydropteroate synthas 96.0 0.14 4.9E-06 45.4 13.5 120 5-126 74-235 (314)
39 3qja_A IGPS, indole-3-glycerol 95.9 0.02 6.8E-07 49.8 7.7 86 4-94 150-243 (272)
40 3q58_A N-acetylmannosamine-6-p 95.8 0.041 1.4E-06 46.5 9.1 84 5-93 118-210 (229)
41 3eoo_A Methylisocitrate lyase; 95.8 0.12 4E-06 45.7 12.3 138 6-204 12-151 (298)
42 3igs_A N-acetylmannosamine-6-p 95.8 0.043 1.5E-06 46.4 9.2 84 5-93 118-210 (232)
43 2yci_X 5-methyltetrahydrofolat 95.7 0.35 1.2E-05 41.9 14.8 149 6-171 68-240 (271)
44 2gjl_A Hypothetical protein PA 95.7 0.33 1.1E-05 42.4 14.9 114 27-173 87-205 (328)
45 3o63_A Probable thiamine-phosp 95.7 0.22 7.4E-06 42.5 13.1 130 5-172 85-222 (243)
46 1qo2_A Molecule: N-((5-phospho 95.6 0.021 7.2E-07 47.7 6.5 140 5-172 63-226 (241)
47 1jub_A Dihydroorotate dehydrog 95.6 0.13 4.6E-06 44.4 11.7 168 7-206 82-298 (311)
48 1wa3_A 2-keto-3-deoxy-6-phosph 95.6 0.054 1.8E-06 43.9 8.6 128 6-174 50-183 (205)
49 2z6i_A Trans-2-enoyl-ACP reduc 95.6 0.26 8.9E-06 43.3 13.7 135 7-173 54-195 (332)
50 3bo9_A Putative nitroalkan dio 95.6 0.28 9.4E-06 43.2 13.7 135 7-173 68-209 (326)
51 1pii_A N-(5'phosphoribosyl)ant 95.5 0.18 6.1E-06 47.0 12.8 151 3-196 144-302 (452)
52 3fa4_A 2,3-dimethylmalate lyas 95.4 0.22 7.6E-06 44.0 12.5 144 5-205 6-152 (302)
53 3tsm_A IGPS, indole-3-glycerol 95.4 0.5 1.7E-05 41.1 14.4 137 4-173 108-253 (272)
54 1yxy_A Putative N-acetylmannos 95.3 0.5 1.7E-05 38.9 13.8 137 5-171 58-217 (234)
55 2yw3_A 4-hydroxy-2-oxoglutarat 95.2 0.33 1.1E-05 40.1 12.4 143 5-199 52-199 (207)
56 1geq_A Tryptophan synthase alp 95.1 0.39 1.3E-05 39.8 12.7 162 3-200 67-244 (248)
57 3tdn_A FLR symmetric alpha-bet 95.1 0.0085 2.9E-07 50.4 2.2 117 5-123 68-205 (247)
58 3khj_A Inosine-5-monophosphate 94.9 0.35 1.2E-05 43.5 12.5 140 5-174 84-241 (361)
59 1vhn_A Putative flavin oxidore 94.9 0.096 3.3E-06 45.9 8.5 112 42-178 104-222 (318)
60 3lye_A Oxaloacetate acetyl hyd 94.9 0.66 2.3E-05 41.1 13.9 146 4-205 12-160 (307)
61 1z41_A YQJM, probable NADH-dep 94.8 1.6 5.6E-05 38.3 16.5 102 49-172 198-310 (338)
62 4fb5_A Probable oxidoreductase 94.8 0.061 2.1E-06 47.0 7.0 75 7-86 69-145 (393)
63 2qjg_A Putative aldolase MJ040 94.7 0.21 7.1E-06 42.2 9.9 86 5-92 134-236 (273)
64 3f4w_A Putative hexulose 6 pho 94.6 0.059 2E-06 43.8 6.1 142 2-173 38-191 (211)
65 3tr9_A Dihydropteroate synthas 94.5 0.62 2.1E-05 41.4 12.9 115 6-124 95-234 (314)
66 4had_A Probable oxidoreductase 94.5 0.07 2.4E-06 46.5 6.6 76 6-86 60-137 (350)
67 3tsm_A IGPS, indole-3-glycerol 94.5 0.094 3.2E-06 45.7 7.3 88 3-95 156-251 (272)
68 2fli_A Ribulose-phosphate 3-ep 94.4 0.22 7.5E-06 40.5 9.1 141 3-173 48-202 (220)
69 1p4c_A L(+)-mandelate dehydrog 94.4 0.37 1.3E-05 43.4 11.4 127 48-206 213-342 (380)
70 4h3v_A Oxidoreductase domain p 94.4 0.088 3E-06 45.9 7.0 71 6-81 49-121 (390)
71 3ffs_A Inosine-5-monophosphate 94.3 0.51 1.7E-05 43.2 12.2 130 17-174 137-280 (400)
72 2h9a_B CO dehydrogenase/acetyl 94.3 0.86 3E-05 40.3 13.4 118 4-125 110-246 (310)
73 1f6y_A 5-methyltetrahydrofolat 94.3 1.4 4.7E-05 37.8 14.3 151 5-171 57-231 (262)
74 2y5s_A DHPS, dihydropteroate s 94.3 1.7 5.9E-05 38.1 15.1 152 6-171 88-272 (294)
75 3ih1_A Methylisocitrate lyase; 94.2 1.6 5.6E-05 38.5 15.0 137 5-203 18-156 (305)
76 1xg4_A Probable methylisocitra 94.2 0.7 2.4E-05 40.6 12.4 138 6-204 7-147 (295)
77 3b0p_A TRNA-dihydrouridine syn 94.1 0.48 1.7E-05 42.1 11.3 107 42-172 104-228 (350)
78 1f76_A Dihydroorotate dehydrog 94.0 0.32 1.1E-05 42.6 9.9 88 59-169 211-318 (336)
79 3b8i_A PA4872 oxaloacetate dec 93.9 0.63 2.1E-05 40.8 11.6 136 6-203 11-148 (287)
80 1to3_A Putative aldolase YIHT; 93.9 0.14 4.7E-06 45.1 7.3 92 3-97 142-257 (304)
81 1qop_A Tryptophan synthase alp 93.9 2.5 8.6E-05 35.9 15.1 143 3-173 80-238 (268)
82 1vhc_A Putative KHG/KDPG aldol 93.8 0.42 1.4E-05 40.1 9.9 103 3-123 54-162 (224)
83 3i65_A Dihydroorotate dehydrog 93.8 0.24 8.4E-06 45.6 9.1 115 59-205 268-400 (415)
84 2nx9_A Oxaloacetate decarboxyl 93.8 1.4 4.9E-05 41.0 14.3 121 30-174 107-236 (464)
85 3rc1_A Sugar 3-ketoreductase; 93.7 0.18 6.3E-06 44.3 7.9 76 6-87 64-141 (350)
86 4fo4_A Inosine 5'-monophosphat 93.7 0.61 2.1E-05 42.1 11.4 121 24-174 108-245 (366)
87 1rpx_A Protein (ribulose-phosp 93.7 0.3 1E-05 40.2 8.7 140 4-173 56-211 (230)
88 3oqb_A Oxidoreductase; structu 93.6 0.42 1.4E-05 42.1 10.1 76 7-87 58-135 (383)
89 1zlp_A PSR132, petal death pro 93.6 0.79 2.7E-05 40.7 11.8 138 7-204 30-169 (318)
90 3uuw_A Putative oxidoreductase 93.5 0.25 8.7E-06 42.2 8.2 76 6-87 43-118 (308)
91 2nli_A Lactate oxidase; flavoe 93.5 0.57 2E-05 42.1 10.8 129 48-207 217-349 (368)
92 2ze3_A DFA0005; organic waste 93.5 3.4 0.00011 35.8 15.3 134 7-205 9-143 (275)
93 3ohs_X Trans-1,2-dihydrobenzen 93.4 0.26 8.8E-06 42.8 8.2 76 6-86 40-117 (334)
94 1yad_A Regulatory protein TENI 93.3 1.1 3.6E-05 36.6 11.4 111 27-172 79-195 (221)
95 4gqa_A NAD binding oxidoreduct 93.2 0.26 9E-06 44.0 8.1 77 6-87 70-148 (412)
96 2qr6_A IMP dehydrogenase/GMP r 93.2 0.62 2.1E-05 41.8 10.6 134 9-172 148-309 (393)
97 1rqb_A Transcarboxylase 5S sub 93.2 1.9 6.6E-05 40.9 14.3 122 29-174 123-255 (539)
98 3hl2_A O-phosphoseryl-tRNA(SEC 93.2 0.29 1E-05 46.2 8.6 106 48-173 172-285 (501)
99 3dty_A Oxidoreductase, GFO/IDH 93.1 0.29 1E-05 43.7 8.3 79 6-87 52-137 (398)
100 2e6f_A Dihydroorotate dehydrog 93.1 0.21 7.1E-06 43.3 6.9 125 50-206 150-300 (314)
101 1h1y_A D-ribulose-5-phosphate 93.1 1 3.5E-05 37.2 11.0 141 4-173 52-205 (228)
102 3v5n_A Oxidoreductase; structu 93.0 0.39 1.3E-05 43.3 9.0 79 6-87 77-162 (417)
103 1rd5_A Tryptophan synthase alp 93.0 2.3 7.7E-05 35.7 13.3 143 3-172 81-233 (262)
104 4a29_A Engineered retro-aldol 92.9 0.52 1.8E-05 40.9 9.1 87 3-94 140-234 (258)
105 3moi_A Probable dehydrogenase; 92.9 0.32 1.1E-05 43.3 8.1 75 7-87 40-116 (387)
106 1zh8_A Oxidoreductase; TM0312, 92.9 0.28 9.7E-06 42.8 7.6 77 6-87 56-134 (340)
107 4ef8_A Dihydroorotate dehydrog 92.8 0.25 8.7E-06 44.4 7.4 124 50-205 183-332 (354)
108 3jr2_A Hexulose-6-phosphate sy 92.8 0.13 4.3E-06 42.5 5.0 140 3-171 45-196 (218)
109 1kbi_A Cytochrome B2, L-LCR; f 92.8 0.56 1.9E-05 44.1 9.9 126 49-206 332-467 (511)
110 3ip3_A Oxidoreductase, putativ 92.7 0.26 8.9E-06 42.9 7.1 79 6-88 40-120 (337)
111 1vcf_A Isopentenyl-diphosphate 92.7 0.7 2.4E-05 40.5 9.9 130 49-207 171-320 (332)
112 4avf_A Inosine-5'-monophosphat 92.6 0.16 5.5E-06 47.4 5.9 119 26-174 231-366 (490)
113 1hg3_A Triosephosphate isomera 92.4 2.6 8.9E-05 35.5 12.7 152 5-198 48-222 (225)
114 4fxs_A Inosine-5'-monophosphat 92.4 0.2 6.9E-06 46.8 6.3 118 26-173 233-367 (496)
115 2nzl_A Hydroxyacid oxidase 1; 92.4 0.73 2.5E-05 41.8 9.9 129 48-207 240-372 (392)
116 1vc4_A Indole-3-glycerol phosp 92.3 1.2 4E-05 38.0 10.6 134 4-172 94-239 (254)
117 1wbh_A KHG/KDPG aldolase; lyas 92.3 1.1 3.6E-05 37.3 10.1 103 3-123 53-161 (214)
118 3ceu_A Thiamine phosphate pyro 92.3 0.37 1.3E-05 39.5 7.1 150 5-204 43-201 (210)
119 3mz0_A Inositol 2-dehydrogenas 92.1 0.49 1.7E-05 41.2 8.1 78 6-87 39-118 (344)
120 3sgz_A Hydroxyacid oxidase 2; 92.1 1 3.4E-05 40.6 10.3 128 49-207 206-337 (352)
121 1nvm_A HOA, 4-hydroxy-2-oxoval 92.0 1.1 3.8E-05 39.7 10.4 124 26-173 96-228 (345)
122 3db2_A Putative NADPH-dependen 91.9 0.74 2.5E-05 40.1 9.1 75 7-87 42-118 (354)
123 3q2i_A Dehydrogenase; rossmann 91.8 0.48 1.6E-05 41.4 7.8 75 7-87 51-127 (354)
124 4hb7_A Dihydropteroate synthas 91.7 5.3 0.00018 34.7 14.1 172 7-202 73-261 (270)
125 2h9a_A Carbon monoxide dehydro 91.6 1.4 4.7E-05 40.9 10.9 136 4-164 142-288 (445)
126 4djd_D C/Fe-SP, corrinoid/iron 91.6 1.9 6.4E-05 38.4 11.4 117 4-124 117-252 (323)
127 2qiw_A PEP phosphonomutase; st 91.6 1.4 4.6E-05 37.9 10.1 68 6-85 10-78 (255)
128 4hkt_A Inositol 2-dehydrogenas 91.6 0.67 2.3E-05 40.0 8.4 73 7-86 40-114 (331)
129 3u3x_A Oxidoreductase; structu 91.5 0.5 1.7E-05 41.7 7.6 76 6-86 62-139 (361)
130 3ec7_A Putative dehydrogenase; 91.5 0.63 2.2E-05 40.9 8.3 78 7-88 61-140 (357)
131 3e9m_A Oxidoreductase, GFO/IDH 91.5 0.76 2.6E-05 39.8 8.7 76 7-87 42-119 (330)
132 4adt_A Pyridoxine biosynthetic 91.4 0.25 8.6E-06 43.5 5.4 140 4-173 66-242 (297)
133 3qtp_A Enolase 1; glycolysis, 91.4 1 3.5E-05 41.9 9.7 92 4-96 284-382 (441)
134 1tlt_A Putative oxidoreductase 91.3 0.66 2.3E-05 39.8 8.0 74 8-87 44-117 (319)
135 3ovp_A Ribulose-phosphate 3-ep 91.2 1.7 5.7E-05 36.4 10.2 139 4-172 50-200 (228)
136 3glc_A Aldolase LSRF; TIM barr 91.2 1.1 3.7E-05 39.3 9.4 82 4-88 159-252 (295)
137 2zbt_A Pyridoxal biosynthesis 91.2 0.098 3.3E-06 45.1 2.5 139 4-173 66-242 (297)
138 3ajx_A 3-hexulose-6-phosphate 91.2 1.7 5.8E-05 34.8 9.9 138 3-173 39-190 (207)
139 1w8s_A FBP aldolase, fructose- 91.1 1.5 5.2E-05 37.4 10.0 83 4-88 126-226 (263)
140 3khj_A Inosine-5-monophosphate 91.1 0.76 2.6E-05 41.2 8.4 81 5-90 134-233 (361)
141 2hjp_A Phosphonopyruvate hydro 91.0 3 0.0001 36.4 12.0 110 6-174 5-115 (290)
142 3ffs_A Inosine-5-monophosphate 91.0 0.5 1.7E-05 43.3 7.2 83 5-92 173-274 (400)
143 2ftp_A Hydroxymethylglutaryl-C 91.0 0.71 2.4E-05 40.1 7.9 99 50-173 128-237 (302)
144 1vc4_A Indole-3-glycerol phosp 90.9 0.49 1.7E-05 40.4 6.7 84 4-93 142-236 (254)
145 3vkj_A Isopentenyl-diphosphate 90.9 1.6 5.6E-05 39.2 10.5 127 48-207 175-331 (368)
146 1mxs_A KDPG aldolase; 2-keto-3 90.8 0.8 2.7E-05 38.4 7.8 103 3-123 63-171 (225)
147 4djd_C C/Fe-SP, corrinoid/iron 90.8 1 3.5E-05 41.9 9.1 140 6-171 145-294 (446)
148 3nl6_A Thiamine biosynthetic b 90.8 3.6 0.00012 38.9 13.1 104 5-123 58-178 (540)
149 1tv5_A Dhodehase, dihydroorota 90.7 1.6 5.3E-05 40.5 10.3 117 58-206 295-429 (443)
150 1gte_A Dihydropyrimidine dehyd 90.5 2.9 9.9E-05 42.1 12.9 166 7-206 624-843 (1025)
151 3otr_A Enolase; structural gen 90.4 0.74 2.5E-05 42.9 7.8 94 3-97 285-386 (452)
152 1gox_A (S)-2-hydroxy-acid oxid 90.4 3.1 0.00011 37.1 11.8 128 48-206 213-344 (370)
153 1ep3_A Dihydroorotate dehydrog 90.2 0.73 2.5E-05 39.4 7.2 122 49-205 153-295 (311)
154 3evn_A Oxidoreductase, GFO/IDH 90.2 0.45 1.5E-05 41.2 6.0 60 28-87 58-119 (329)
155 1p0k_A Isopentenyl-diphosphate 90.2 2.8 9.5E-05 36.8 11.2 130 49-206 167-315 (349)
156 3nav_A Tryptophan synthase alp 90.2 7.7 0.00026 33.4 13.7 140 3-172 83-240 (271)
157 3sgz_A Hydroxyacid oxidase 2; 90.1 3.3 0.00011 37.2 11.6 101 49-172 89-248 (352)
158 3ezy_A Dehydrogenase; structur 90.1 1.7 5.7E-05 37.7 9.5 75 7-86 39-115 (344)
159 1y0e_A Putative N-acetylmannos 90.1 0.76 2.6E-05 37.4 6.9 82 6-92 107-203 (223)
160 1ydn_A Hydroxymethylglutaryl-C 90.0 1.1 3.8E-05 38.5 8.2 135 15-173 71-233 (295)
161 3eeg_A 2-isopropylmalate synth 90.0 2.3 8E-05 37.5 10.5 143 32-200 37-192 (325)
162 2y1h_A Putative deoxyribonucle 90.0 2.5 8.5E-05 35.0 10.2 87 50-171 130-216 (272)
163 1tqj_A Ribulose-phosphate 3-ep 90.0 0.55 1.9E-05 39.3 6.1 139 4-173 50-205 (230)
164 3i23_A Oxidoreductase, GFO/IDH 89.9 0.6 2.1E-05 40.8 6.6 55 32-86 61-116 (349)
165 2nvw_A Galactose/lactose metab 89.9 0.88 3E-05 42.0 8.0 74 7-86 81-165 (479)
166 3e18_A Oxidoreductase; dehydro 89.9 0.81 2.8E-05 40.2 7.4 71 11-87 45-117 (359)
167 1w0m_A TIM, triosephosphate is 89.8 3.6 0.00012 34.7 11.1 151 7-199 47-220 (226)
168 4fxs_A Inosine-5'-monophosphat 89.8 1.4 4.9E-05 41.1 9.4 79 5-88 260-358 (496)
169 1xm3_A Thiazole biosynthesis p 89.8 6.4 0.00022 33.3 12.9 116 49-203 113-233 (264)
170 3euw_A MYO-inositol dehydrogen 89.7 0.86 2.9E-05 39.5 7.4 73 7-85 41-115 (344)
171 3bg3_A Pyruvate carboxylase, m 89.7 5.7 0.00019 38.9 13.8 97 52-173 230-339 (718)
172 2qjg_A Putative aldolase MJ040 89.7 5.7 0.00019 33.2 12.4 121 26-172 102-240 (273)
173 3oix_A Putative dihydroorotate 89.7 0.96 3.3E-05 40.5 7.8 122 50-206 183-331 (345)
174 2ixa_A Alpha-N-acetylgalactosa 89.4 1.5 5.2E-05 39.7 9.0 61 27-87 81-143 (444)
175 1s2w_A Phosphoenolpyruvate pho 89.3 9.4 0.00032 33.3 13.7 110 6-174 9-119 (295)
176 2ekc_A AQ_1548, tryptophan syn 89.3 3.5 0.00012 35.0 10.7 109 57-199 13-145 (262)
177 4gmf_A Yersiniabactin biosynth 89.2 0.95 3.3E-05 40.6 7.4 74 6-87 43-120 (372)
178 1lc0_A Biliverdin reductase A; 89.1 1.1 3.6E-05 38.4 7.4 60 28-87 56-117 (294)
179 1xea_A Oxidoreductase, GFO/IDH 89.0 1.2 4.1E-05 38.3 7.7 77 7-87 39-115 (323)
180 4fo4_A Inosine 5'-monophosphat 88.9 1.5 5E-05 39.6 8.5 82 5-91 137-238 (366)
181 1eep_A Inosine 5'-monophosphat 88.9 1.3 4.6E-05 39.8 8.2 81 5-90 182-282 (404)
182 2al1_A Enolase 1, 2-phospho-D- 88.8 1.4 4.8E-05 40.5 8.4 90 5-95 279-374 (436)
183 3eol_A Isocitrate lyase; seatt 88.8 6.6 0.00023 36.3 12.8 166 4-206 49-219 (433)
184 2akz_A Gamma enolase, neural; 88.7 1.5 5E-05 40.5 8.4 90 5-95 276-371 (439)
185 3iv3_A Tagatose 1,6-diphosphat 88.6 4.1 0.00014 36.3 11.1 93 3-97 147-283 (332)
186 1i4n_A Indole-3-glycerol phosp 88.5 0.6 2E-05 40.1 5.3 77 3-80 137-222 (251)
187 1wv2_A Thiazole moeity, thiazo 88.3 1.8 6.2E-05 37.6 8.2 81 6-91 122-214 (265)
188 1jcn_A Inosine monophosphate d 88.3 3.3 0.00011 38.3 10.7 118 28-174 259-392 (514)
189 3pnz_A Phosphotriesterase fami 88.3 3.2 0.00011 36.6 10.1 110 5-124 75-238 (330)
190 2ho3_A Oxidoreductase, GFO/IDH 88.2 1.6 5.6E-05 37.4 8.0 75 7-86 38-113 (325)
191 2uva_G Fatty acid synthase bet 88.1 3.2 0.00011 45.3 11.7 119 29-172 659-798 (2060)
192 3cea_A MYO-inositol 2-dehydrog 88.1 1.5 5.3E-05 37.7 7.8 74 7-85 46-121 (346)
193 3ble_A Citramalate synthase fr 88.1 2.5 8.6E-05 37.3 9.3 100 50-173 141-247 (337)
194 4avf_A Inosine-5'-monophosphat 88.0 1.9 6.6E-05 40.0 8.9 81 5-90 258-358 (490)
195 2glx_A 1,5-anhydro-D-fructose 88.0 2.2 7.7E-05 36.4 8.8 76 7-87 37-114 (332)
196 1ydw_A AX110P-like protein; st 88.0 1 3.5E-05 39.3 6.7 79 7-87 43-123 (362)
197 1jcn_A Inosine monophosphate d 87.9 1 3.6E-05 41.8 7.0 79 5-88 284-382 (514)
198 3k13_A 5-methyltetrahydrofolat 87.9 2.3 7.9E-05 37.4 8.8 141 13-168 81-253 (300)
199 3o9z_A Lipopolysaccaride biosy 87.6 0.83 2.9E-05 39.5 5.8 52 36-87 73-124 (312)
200 2h6r_A Triosephosphate isomera 87.6 10 0.00036 31.1 12.3 149 7-197 44-215 (219)
201 1ydo_A HMG-COA lyase; TIM-barr 87.5 2.9 9.9E-05 36.5 9.3 99 50-173 126-235 (307)
202 3fhl_A Putative oxidoreductase 87.5 0.86 2.9E-05 40.0 5.9 51 36-86 66-116 (362)
203 3vnd_A TSA, tryptophan synthas 87.5 13 0.00044 31.9 13.7 139 4-172 82-238 (267)
204 2nv1_A Pyridoxal biosynthesis 87.3 0.72 2.5E-05 40.0 5.2 138 5-173 67-242 (305)
205 3btv_A Galactose/lactose metab 87.3 1 3.5E-05 40.8 6.5 74 7-86 62-146 (438)
206 2fym_A Enolase; RNA degradosom 87.2 3.4 0.00012 37.6 9.9 85 3-87 271-363 (431)
207 3kux_A Putative oxidoreductase 87.1 1.1 3.9E-05 38.9 6.5 59 28-86 58-118 (352)
208 3gdo_A Uncharacterized oxidore 87.1 1.4 4.7E-05 38.7 7.0 57 31-87 60-117 (358)
209 3oa2_A WBPB; oxidoreductase, s 87.1 1.3 4.3E-05 38.5 6.6 52 36-87 74-125 (318)
210 3r2g_A Inosine 5'-monophosphat 87.1 1.8 6.1E-05 39.1 7.8 78 6-88 130-223 (361)
211 1ypf_A GMP reductase; GUAC, pu 86.9 1.5 5.2E-05 38.5 7.2 79 5-88 137-234 (336)
212 1vrd_A Inosine-5'-monophosphat 86.9 2.8 9.6E-05 38.5 9.2 116 27-172 240-372 (494)
213 1yxy_A Putative N-acetylmannos 86.9 2.9 9.8E-05 34.2 8.4 80 7-91 122-213 (234)
214 3bo9_A Putative nitroalkan dio 86.8 2.1 7.1E-05 37.5 7.9 72 8-80 116-196 (326)
215 3tn4_A Phosphotriesterase; lac 86.8 5.2 0.00018 35.8 10.7 109 5-124 112-263 (360)
216 3ewb_X 2-isopropylmalate synth 86.8 3.9 0.00013 35.5 9.6 99 50-173 125-231 (293)
217 2gjl_A Hypothetical protein PA 86.6 2.3 8E-05 36.9 8.1 72 8-80 110-192 (328)
218 1h6d_A Precursor form of gluco 86.6 1.1 3.6E-05 40.7 6.1 79 7-86 121-201 (433)
219 3r2g_A Inosine 5'-monophosphat 86.6 5.5 0.00019 35.8 10.7 126 14-171 40-171 (361)
220 4a29_A Engineered retro-aldol 86.6 10 0.00035 32.7 12.0 136 4-172 92-236 (258)
221 3vav_A 3-methyl-2-oxobutanoate 86.5 15 0.00053 31.8 13.6 154 5-171 18-195 (275)
222 3qn3_A Enolase; structural gen 86.4 1.9 6.5E-05 39.5 7.7 92 4-96 266-365 (417)
223 3cwo_X Beta/alpha-barrel prote 86.4 1.7 5.9E-05 34.4 6.7 160 3-194 39-220 (237)
224 2p2s_A Putative oxidoreductase 86.3 1.1 3.7E-05 38.7 5.8 60 28-87 57-118 (336)
225 3rmj_A 2-isopropylmalate synth 86.2 3.6 0.00012 37.0 9.4 141 32-200 43-198 (370)
226 3ngj_A Deoxyribose-phosphate a 86.2 1.6 5.6E-05 37.2 6.7 79 60-164 145-224 (239)
227 1ep3_A Dihydroorotate dehydrog 86.2 1.4 4.8E-05 37.5 6.4 89 59-169 98-196 (311)
228 3e82_A Putative oxidoreductase 86.2 1.1 3.9E-05 39.4 5.9 60 28-87 58-119 (364)
229 3hgj_A Chromate reductase; TIM 86.1 11 0.00038 33.1 12.4 99 50-171 207-320 (349)
230 2ptz_A Enolase; lyase, glycoly 85.8 2.4 8.1E-05 38.8 8.0 82 6-87 279-368 (432)
231 3tqp_A Enolase; energy metabol 85.7 2.4 8.2E-05 39.0 8.0 92 3-95 267-366 (428)
232 2cw6_A Hydroxymethylglutaryl-C 85.7 4.1 0.00014 35.0 9.2 99 50-173 125-234 (298)
233 3m2t_A Probable dehydrogenase; 85.5 0.98 3.3E-05 39.7 5.1 59 28-86 59-119 (359)
234 3usb_A Inosine-5'-monophosphat 85.2 1.7 5.8E-05 40.7 6.9 116 27-172 259-391 (511)
235 1zfj_A Inosine monophosphate d 85.2 3.3 0.00011 37.9 8.7 81 5-90 262-362 (491)
236 3vzx_A Heptaprenylglyceryl pho 85.0 8.8 0.0003 32.3 10.6 148 5-198 49-226 (228)
237 1gox_A (S)-2-hydroxy-acid oxid 85.0 3.1 0.00011 37.1 8.3 75 5-80 214-300 (370)
238 3uj2_A Enolase 1; enzyme funct 84.7 2.7 9.1E-05 38.9 7.9 91 4-95 294-392 (449)
239 3f4l_A Putative oxidoreductase 84.7 1.5 5.2E-05 38.1 5.9 59 28-86 56-116 (345)
240 3eeg_A 2-isopropylmalate synth 84.6 3.6 0.00012 36.2 8.4 99 50-173 126-232 (325)
241 4ew6_A D-galactose-1-dehydroge 84.6 1.2 4E-05 38.8 5.2 60 28-87 71-133 (330)
242 2c6q_A GMP reductase 2; TIM ba 84.5 3.6 0.00012 36.6 8.5 75 5-80 149-243 (351)
243 1xm3_A Thiazole biosynthesis p 84.4 4.1 0.00014 34.6 8.4 83 5-92 112-206 (264)
244 3e61_A Putative transcriptiona 84.3 6.6 0.00022 31.8 9.4 88 5-95 27-130 (277)
245 1wa3_A 2-keto-3-deoxy-6-phosph 84.3 0.92 3.1E-05 36.4 4.1 80 7-92 95-177 (205)
246 3ivs_A Homocitrate synthase, m 84.3 7.1 0.00024 35.8 10.5 139 31-199 69-220 (423)
247 3gr7_A NADPH dehydrogenase; fl 84.0 13 0.00046 32.6 11.9 99 50-171 199-309 (340)
248 2z6i_A Trans-2-enoyl-ACP reduc 83.9 2.8 9.6E-05 36.6 7.4 70 10-80 104-182 (332)
249 2ekc_A AQ_1548, tryptophan syn 83.7 16 0.00053 30.8 11.8 162 3-199 80-258 (262)
250 1w6t_A Enolase; bacterial infe 83.4 3.3 0.00011 38.0 7.8 33 3-35 283-315 (444)
251 3o74_A Fructose transport syst 83.4 9.1 0.00031 30.6 9.9 91 5-95 21-128 (272)
252 3ivs_A Homocitrate synthase, m 83.3 4.9 0.00017 36.9 9.0 99 51-173 156-257 (423)
253 3k4h_A Putative transcriptiona 83.2 9.2 0.00032 31.0 9.9 90 5-95 32-139 (292)
254 2rgy_A Transcriptional regulat 83.1 11 0.00038 30.8 10.4 90 5-95 27-136 (290)
255 3rmj_A 2-isopropylmalate synth 83.0 5.5 0.00019 35.8 9.1 98 51-173 133-238 (370)
256 1ps9_A 2,4-dienoyl-COA reducta 82.7 33 0.0011 32.4 17.2 101 50-173 196-314 (671)
257 1ub3_A Aldolase protein; schif 82.3 4.5 0.00015 33.8 7.7 60 58-123 119-179 (220)
258 3rzi_A Probable 3-deoxy-D-arab 82.3 3.8 0.00013 38.1 7.7 88 36-129 276-371 (462)
259 1vrd_A Inosine-5'-monophosphat 82.3 4.7 0.00016 37.0 8.5 76 4-80 265-360 (494)
260 3bc8_A O-phosphoseryl-tRNA(SEC 82.1 6 0.00021 36.5 9.1 107 44-171 151-265 (450)
261 1mzh_A Deoxyribose-phosphate a 82.0 9.8 0.00034 31.4 9.7 86 51-164 107-199 (225)
262 3oix_A Putative dihydroorotate 82.0 3.7 0.00013 36.6 7.5 87 58-166 127-221 (345)
263 3hg3_A Alpha-galactosidase A; 81.8 1.4 4.8E-05 40.4 4.7 65 3-67 84-172 (404)
264 1o66_A 3-methyl-2-oxobutanoate 81.8 25 0.00086 30.5 15.1 153 5-170 6-182 (275)
265 3ewb_X 2-isopropylmalate synth 81.8 7.8 0.00027 33.5 9.3 136 36-200 41-191 (293)
266 3bw2_A 2-nitropropane dioxygen 81.5 5.9 0.0002 35.0 8.6 81 9-95 138-238 (369)
267 1tqx_A D-ribulose-5-phosphate 81.5 15 0.00052 30.6 10.7 142 4-173 51-205 (227)
268 1p4c_A L(+)-mandelate dehydrog 81.4 3.3 0.00011 37.1 7.0 79 5-88 214-302 (380)
269 3dbi_A Sugar-binding transcrip 81.4 10 0.00036 31.8 9.9 91 5-95 82-189 (338)
270 2c6q_A GMP reductase 2; TIM ba 81.4 5.9 0.0002 35.2 8.6 94 50-173 150-256 (351)
271 3cjp_A Predicted amidohydrolas 81.3 7.9 0.00027 31.8 8.9 51 48-98 132-183 (272)
272 3lab_A Putative KDPG (2-keto-3 81.2 2.9 0.0001 35.1 6.1 102 3-122 50-163 (217)
273 3sr7_A Isopentenyl-diphosphate 81.1 14 0.00047 33.2 10.9 129 4-171 104-239 (365)
274 1jvn_A Glutamine, bifunctional 80.4 5 0.00017 37.8 8.1 156 4-194 315-543 (555)
275 2qf7_A Pyruvate carboxylase pr 80.4 15 0.00052 37.7 12.2 99 50-173 676-786 (1165)
276 3egc_A Putative ribose operon 80.2 9.4 0.00032 31.1 8.9 90 5-95 27-133 (291)
277 3usb_A Inosine-5'-monophosphat 79.9 5.8 0.0002 37.0 8.3 79 5-88 285-383 (511)
278 2qr6_A IMP dehydrogenase/GMP r 79.9 4.8 0.00016 35.9 7.5 73 7-80 202-297 (393)
279 3kke_A LACI family transcripti 79.8 24 0.00082 29.0 11.6 90 5-95 34-139 (303)
280 2ovl_A Putative racemase; stru 79.7 12 0.0004 32.9 9.9 20 13-32 215-234 (371)
281 3r12_A Deoxyribose-phosphate a 79.7 5.8 0.0002 34.2 7.6 79 60-164 161-240 (260)
282 3tb6_A Arabinose metabolism tr 79.6 23 0.00077 28.6 11.3 91 5-95 34-145 (298)
283 3sr7_A Isopentenyl-diphosphate 79.5 8 0.00028 34.7 8.8 75 5-80 195-298 (365)
284 1eye_A DHPS 1, dihydropteroate 79.2 8.4 0.00029 33.3 8.6 74 69-169 25-105 (280)
285 3noy_A 4-hydroxy-3-methylbut-2 79.2 4.1 0.00014 36.9 6.7 114 4-123 72-209 (366)
286 3qk7_A Transcriptional regulat 79.2 14 0.00047 30.4 9.7 90 5-95 29-134 (294)
287 1eep_A Inosine 5'-monophosphat 79.2 18 0.00062 32.2 11.1 105 36-170 166-286 (404)
288 4gj1_A 1-(5-phosphoribosyl)-5- 79.1 8.1 0.00028 32.4 8.3 117 5-123 64-201 (243)
289 3l5l_A Xenobiotic reductase A; 79.1 15 0.0005 32.6 10.3 100 50-172 213-328 (363)
290 3mcm_A 2-amino-4-hydroxy-6-hyd 78.8 19 0.00064 33.3 11.2 110 15-126 268-401 (442)
291 3jy6_A Transcriptional regulat 78.7 16 0.00056 29.5 9.9 89 5-95 26-131 (276)
292 1pii_A N-(5'phosphoribosyl)ant 78.4 25 0.00085 32.5 12.0 136 4-173 96-240 (452)
293 1me8_A Inosine-5'-monophosphat 78.4 21 0.00071 33.0 11.6 117 29-173 247-385 (503)
294 3ctl_A D-allulose-6-phosphate 77.8 9.6 0.00033 31.8 8.3 139 3-171 44-198 (231)
295 3e3m_A Transcriptional regulat 77.6 11 0.00039 31.9 9.0 89 5-95 89-195 (355)
296 2pa6_A Enolase; glycolysis, ly 77.4 7.2 0.00024 35.3 7.9 33 3-35 271-303 (427)
297 3brq_A HTH-type transcriptiona 77.1 17 0.00059 29.3 9.6 90 5-95 40-147 (296)
298 1jub_A Dihydroorotate dehydrog 77.0 24 0.00082 30.0 10.9 92 59-169 93-192 (311)
299 3h5o_A Transcriptional regulat 77.0 14 0.00049 31.0 9.4 89 5-94 81-185 (339)
300 1q7z_A 5-methyltetrahydrofolat 77.0 31 0.0011 32.6 12.4 137 12-171 380-538 (566)
301 2pgw_A Muconate cycloisomerase 76.9 8.5 0.00029 34.0 8.2 29 48-77 229-258 (384)
302 3d8u_A PURR transcriptional re 76.9 10 0.00035 30.5 8.1 90 5-95 22-128 (275)
303 3hcw_A Maltose operon transcri 76.7 23 0.0008 28.9 10.4 90 5-95 31-139 (295)
304 1ypf_A GMP reductase; GUAC, pu 76.6 37 0.0013 29.5 17.4 175 9-212 87-317 (336)
305 3c1a_A Putative oxidoreductase 76.6 4.3 0.00015 34.6 5.9 53 35-87 69-121 (315)
306 3tdn_A FLR symmetric alpha-bet 76.5 9.8 0.00033 31.3 8.0 73 74-170 36-109 (247)
307 1f8m_A Isocitrate lyase, ICL; 76.2 9.4 0.00032 35.2 8.4 72 119-206 149-222 (429)
308 3cyj_A Mandelate racemase/muco 76.2 9.2 0.00031 33.7 8.2 88 4-95 204-298 (372)
309 2fep_A Catabolite control prot 76.1 22 0.00076 29.0 10.1 90 5-95 35-141 (289)
310 3f4w_A Putative hexulose 6 pho 76.1 8.3 0.00028 30.7 7.2 84 3-92 90-186 (211)
311 3gv0_A Transcriptional regulat 75.9 13 0.00043 30.4 8.5 90 5-95 29-135 (288)
312 2vef_A Dihydropteroate synthas 75.8 4.8 0.00016 35.5 6.1 62 67-128 27-95 (314)
313 1aj0_A DHPS, dihydropteroate s 75.4 13 0.00044 32.2 8.7 75 69-169 34-115 (282)
314 1p0k_A Isopentenyl-diphosphate 75.4 11 0.00039 32.8 8.5 79 5-88 167-275 (349)
315 2y5s_A DHPS, dihydropteroate s 75.2 7.1 0.00024 34.1 7.0 74 69-169 42-122 (294)
316 2agk_A 1-(5-phosphoribosyl)-5- 75.2 6.9 0.00024 33.2 6.8 154 5-194 65-256 (260)
317 3rot_A ABC sugar transporter, 75.1 32 0.0011 28.0 11.0 90 5-94 22-137 (297)
318 1m3u_A 3-methyl-2-oxobutanoate 75.0 40 0.0014 29.0 14.6 142 5-170 6-182 (264)
319 3bbl_A Regulatory protein of L 74.8 32 0.0011 27.9 11.3 90 5-95 27-133 (287)
320 1oy0_A Ketopantoate hydroxymet 74.6 42 0.0014 29.1 15.6 153 5-170 23-200 (281)
321 4hb7_A Dihydropteroate synthas 74.6 7.8 0.00027 33.6 7.0 76 67-169 24-106 (270)
322 1i4n_A Indole-3-glycerol phosp 74.6 32 0.0011 29.1 10.9 135 4-173 89-234 (251)
323 1tzz_A Hypothetical protein L1 74.5 15 0.00051 32.6 9.1 76 12-87 233-317 (392)
324 1mxs_A KDPG aldolase; 2-keto-3 74.2 35 0.0012 28.2 10.8 121 10-171 21-146 (225)
325 3i4e_A Isocitrate lyase; struc 74.2 12 0.00042 34.6 8.6 72 119-206 153-226 (439)
326 3w01_A Heptaprenylglyceryl pho 74.2 31 0.001 29.2 10.5 148 5-198 54-232 (235)
327 1bf6_A Phosphotriesterase homo 74.2 7.5 0.00026 32.0 6.7 64 51-124 143-208 (291)
328 3ovg_A Amidohydrolase; structu 73.9 6 0.0002 35.4 6.3 65 51-124 174-240 (363)
329 2r14_A Morphinone reductase; H 73.8 28 0.00097 31.0 10.8 97 51-172 222-331 (377)
330 3huu_A Transcription regulator 73.5 32 0.0011 28.2 10.5 90 5-95 46-152 (305)
331 1rd5_A Tryptophan synthase alp 73.5 18 0.00063 30.0 9.0 27 65-92 25-51 (262)
332 3hbl_A Pyruvate carboxylase; T 73.1 43 0.0015 34.4 13.1 109 71-203 690-814 (1150)
333 1sjd_A N-acylamino acid racema 72.9 24 0.00081 30.8 9.9 82 12-94 205-291 (368)
334 2htm_A Thiazole biosynthesis p 72.9 13 0.00043 32.3 7.8 80 6-90 111-204 (268)
335 1ka9_F Imidazole glycerol phos 72.8 10 0.00035 31.0 7.1 74 74-171 32-106 (252)
336 1h5y_A HISF; histidine biosynt 72.6 12 0.0004 30.2 7.3 73 74-170 34-107 (253)
337 3kru_A NADH:flavin oxidoreduct 72.5 47 0.0016 29.2 11.8 101 49-172 197-310 (343)
338 1kbi_A Cytochrome B2, L-LCR; f 72.4 62 0.0021 30.1 14.4 142 3-171 207-373 (511)
339 2nli_A Lactate oxidase; flavoe 72.0 13 0.00046 33.0 8.2 85 5-95 218-314 (368)
340 1tx2_A DHPS, dihydropteroate s 72.0 5.7 0.0002 34.8 5.6 72 71-169 61-140 (297)
341 3k9c_A Transcriptional regulat 71.9 20 0.00069 29.2 8.8 89 5-95 30-134 (289)
342 2e6f_A Dihydroorotate dehydrog 71.9 22 0.00075 30.3 9.3 93 58-169 92-195 (314)
343 1zfj_A Inosine monophosphate d 71.9 11 0.00037 34.4 7.7 116 27-172 236-368 (491)
344 3k2g_A Resiniferatoxin-binding 71.5 43 0.0015 29.6 11.4 111 5-124 115-262 (364)
345 3lg3_A Isocitrate lyase; conse 71.1 12 0.00042 34.5 7.8 72 119-206 153-226 (435)
346 1wbh_A KHG/KDPG aldolase; lyas 71.1 39 0.0013 27.6 10.3 120 10-168 11-135 (214)
347 1yix_A Deoxyribonuclease YCFH; 70.9 20 0.00069 29.0 8.5 89 50-171 115-205 (265)
348 3tr9_A Dihydropteroate synthas 70.9 16 0.00054 32.3 8.2 74 70-169 46-130 (314)
349 3fok_A Uncharacterized protein 70.9 7.5 0.00026 34.4 6.1 91 3-98 163-277 (307)
350 1viz_A PCRB protein homolog; s 70.9 18 0.00062 30.5 8.3 135 3-171 49-212 (240)
351 2h0a_A TTHA0807, transcription 70.7 5.7 0.0002 32.1 5.0 90 5-95 18-122 (276)
352 4e38_A Keto-hydroxyglutarate-a 70.6 6.1 0.00021 33.4 5.3 76 6-87 117-196 (232)
353 2qgy_A Enolase from the enviro 70.4 22 0.00075 31.5 9.2 28 48-76 233-261 (391)
354 1mdl_A Mandelate racemase; iso 70.4 19 0.00067 31.3 8.8 42 48-94 228-270 (359)
355 2iks_A DNA-binding transcripti 70.2 26 0.0009 28.5 9.1 91 5-95 39-146 (293)
356 3oa3_A Aldolase; structural ge 70.2 13 0.00045 32.4 7.5 79 60-164 176-258 (288)
357 1j6o_A TATD-related deoxyribon 70.1 19 0.00064 29.8 8.2 43 49-97 123-167 (268)
358 3pnz_A Phosphotriesterase fami 69.9 34 0.0012 29.9 10.2 26 45-70 71-97 (330)
359 1vcf_A Isopentenyl-diphosphate 68.9 9.8 0.00033 33.1 6.5 84 5-95 171-286 (332)
360 3m9w_A D-xylose-binding peripl 68.8 24 0.00081 29.1 8.6 90 5-94 21-130 (313)
361 2nzl_A Hydroxyacid oxidase 1; 68.6 12 0.00042 33.7 7.2 85 5-95 241-337 (392)
362 1dqu_A Isocitrate lyase; beta 68.4 14 0.00047 35.1 7.7 72 119-206 163-236 (538)
363 3l49_A ABC sugar (ribose) tran 68.4 28 0.00095 28.1 8.8 91 4-94 23-132 (291)
364 3bil_A Probable LACI-family tr 68.4 50 0.0017 27.8 10.8 89 5-94 85-191 (348)
365 3inp_A D-ribulose-phosphate 3- 68.1 18 0.0006 30.7 7.7 139 3-171 72-225 (246)
366 1thf_D HISF protein; thermophI 67.5 14 0.00047 30.2 6.8 72 74-169 31-103 (253)
367 1vhc_A Putative KHG/KDPG aldol 67.5 51 0.0018 27.1 11.1 119 11-168 13-136 (224)
368 3clk_A Transcription regulator 67.0 27 0.00093 28.3 8.5 90 5-95 27-133 (290)
369 3qhp_A Type 1 capsular polysac 67.0 8.9 0.0003 28.4 5.1 63 6-69 45-109 (166)
370 2w6r_A Imidazole glycerol phos 66.6 10 0.00035 31.4 5.8 88 60-171 17-105 (266)
371 3c3k_A Alanine racemase; struc 66.6 28 0.00094 28.3 8.5 89 5-95 27-132 (285)
372 2rdx_A Mandelate racemase/muco 66.6 44 0.0015 29.3 10.3 26 62-87 264-289 (379)
373 1ydn_A Hydroxymethylglutaryl-C 66.2 27 0.00092 29.6 8.6 125 49-200 61-196 (295)
374 3qtg_A Pyruvate kinase, PK; TI 66.2 9.9 0.00034 35.4 6.1 105 4-115 210-339 (461)
375 2vp8_A Dihydropteroate synthas 65.9 14 0.00046 32.7 6.7 73 69-169 61-142 (318)
376 1gte_A Dihydropyrimidine dehyd 65.9 29 0.001 34.8 10.0 90 59-168 634-734 (1025)
377 2v82_A 2-dehydro-3-deoxy-6-pho 65.8 8.7 0.0003 30.7 5.1 80 7-92 92-175 (212)
378 2gou_A Oxidoreductase, FMN-bin 65.8 51 0.0017 29.1 10.6 97 50-172 216-325 (365)
379 1r0m_A N-acylamino acid racema 65.5 30 0.001 30.3 9.0 83 12-95 211-298 (375)
380 2dqw_A Dihydropteroate synthas 65.3 8.3 0.00028 33.7 5.2 61 67-128 46-113 (294)
381 3ndo_A Deoxyribose-phosphate a 64.8 13 0.00044 31.4 6.1 80 60-164 130-214 (231)
382 3l6u_A ABC-type sugar transpor 64.7 32 0.0011 27.7 8.5 90 5-94 27-142 (293)
383 1to3_A Putative aldolase YIHT; 64.7 53 0.0018 28.4 10.3 122 27-171 112-256 (304)
384 2uv8_G Fatty acid synthase sub 64.7 23 0.00078 38.8 9.3 113 36-175 674-808 (2051)
385 3h1g_A Chemotaxis protein CHEY 64.6 29 0.001 24.3 7.4 66 78-171 42-111 (129)
386 1f6y_A 5-methyltetrahydrofolat 64.4 9.7 0.00033 32.4 5.4 55 71-127 23-78 (262)
387 1w8s_A FBP aldolase, fructose- 64.2 64 0.0022 27.1 11.8 86 55-170 134-232 (263)
388 3t7v_A Methylornithine synthas 63.6 70 0.0024 27.3 17.3 82 6-88 130-232 (350)
389 1n7k_A Deoxyribose-phosphate a 63.5 65 0.0022 27.0 10.3 79 58-164 132-216 (234)
390 3uw2_A Phosphoglucomutase/phos 63.3 13 0.00045 34.4 6.4 62 118-201 194-256 (485)
391 2ffi_A 2-pyrone-4,6-dicarboxyl 63.3 9.1 0.00031 31.6 4.9 47 48-99 126-172 (288)
392 3k30_A Histamine dehydrogenase 63.3 87 0.003 29.6 12.4 91 59-173 224-328 (690)
393 2poz_A Putative dehydratase; o 63.1 20 0.00068 31.7 7.4 30 48-78 238-268 (392)
394 2o56_A Putative mandelate race 62.9 20 0.00067 31.9 7.3 29 48-77 254-283 (407)
395 1me8_A Inosine-5'-monophosphat 62.9 19 0.00064 33.3 7.4 74 6-80 272-372 (503)
396 2p8b_A Mandelate racemase/muco 62.9 14 0.00048 32.3 6.3 30 48-78 225-255 (369)
397 2hsg_A Glucose-resistance amyl 62.8 39 0.0013 28.1 8.9 90 5-95 79-185 (332)
398 2nv1_A Pyridoxal biosynthesis 62.7 7.9 0.00027 33.3 4.6 77 12-93 121-238 (305)
399 3f6p_A Transcriptional regulat 62.7 24 0.00081 24.5 6.5 82 54-171 21-103 (120)
400 3b0p_A TRNA-dihydrouridine syn 62.4 51 0.0017 28.8 9.9 86 5-97 115-228 (350)
401 3i4k_A Muconate lactonizing en 62.4 66 0.0023 28.3 10.7 79 39-126 170-253 (383)
402 3g1w_A Sugar ABC transporter; 62.2 61 0.0021 26.2 10.8 90 5-94 23-134 (305)
403 3nav_A Tryptophan synthase alp 62.0 24 0.00081 30.3 7.4 17 59-76 208-224 (271)
404 2f6u_A GGGPS, (S)-3-O-geranylg 61.9 6 0.00021 33.4 3.5 133 1-168 47-217 (234)
405 3pdk_A Phosphoglucosamine muta 61.8 17 0.00059 33.4 6.9 57 118-196 194-251 (469)
406 1ujp_A Tryptophan synthase alp 61.8 74 0.0025 27.0 11.6 159 4-200 79-252 (271)
407 2vc7_A Aryldialkylphosphatase; 61.6 26 0.0009 29.2 7.6 64 51-124 156-222 (314)
408 3i4k_A Muconate lactonizing en 61.4 49 0.0017 29.2 9.7 76 11-86 216-296 (383)
409 1vyr_A Pentaerythritol tetrani 61.3 60 0.002 28.6 10.2 94 52-171 218-325 (364)
410 2gl5_A Putative dehydratase pr 61.2 19 0.00066 31.9 7.0 42 47-93 256-298 (410)
411 4fe7_A Xylose operon regulator 61.2 27 0.00093 30.5 7.9 88 5-95 43-147 (412)
412 1mzh_A Deoxyribose-phosphate a 61.1 44 0.0015 27.3 8.7 78 5-88 105-199 (225)
413 3dxi_A Putative aldolase; TIM 61.1 7.1 0.00024 34.4 4.0 72 110-202 177-263 (320)
414 1tkk_A Similar to chloromucona 60.9 28 0.00097 30.3 7.9 30 48-78 226-256 (366)
415 3bjs_A Mandelate racemase/muco 60.9 47 0.0016 29.8 9.6 76 12-87 252-333 (428)
416 2ztj_A Homocitrate synthase; ( 60.9 85 0.0029 27.8 11.2 134 32-199 34-184 (382)
417 2yw3_A 4-hydroxy-2-oxoglutarat 60.7 41 0.0014 27.2 8.4 124 3-168 2-130 (207)
418 3lrk_A Alpha-galactosidase 1; 60.6 7 0.00024 36.6 4.0 64 3-66 94-185 (479)
419 1xwy_A DNAse TATD, deoxyribonu 60.4 27 0.00093 28.3 7.3 61 50-124 116-178 (264)
420 2yzr_A Pyridoxal biosynthesis 60.1 18 0.00061 32.3 6.4 63 4-67 62-149 (330)
421 2vk2_A YTFQ, ABC transporter p 59.8 44 0.0015 27.3 8.6 90 5-94 21-135 (306)
422 2nql_A AGR_PAT_674P, isomerase 59.5 15 0.00053 32.4 6.0 29 48-77 247-276 (388)
423 2fvy_A D-galactose-binding per 59.4 50 0.0017 26.7 8.8 90 5-94 21-147 (309)
424 3h5i_A Response regulator/sens 59.2 24 0.00082 25.2 6.1 104 53-203 23-127 (140)
425 1q6o_A Humps, 3-keto-L-gulonat 59.2 39 0.0013 27.1 8.0 138 3-173 42-195 (216)
426 3hzh_A Chemotaxis response reg 58.8 32 0.0011 25.1 6.9 88 50-171 51-141 (157)
427 3t05_A Pyruvate kinase, PK; te 58.6 18 0.00063 34.7 6.6 98 4-102 220-341 (606)
428 1nu5_A Chloromuconate cycloiso 58.6 35 0.0012 29.7 8.2 23 12-34 211-233 (370)
429 3no5_A Uncharacterized protein 58.5 10 0.00036 32.7 4.5 43 152-200 33-75 (275)
430 3gtx_A Organophosphorus hydrol 58.5 30 0.001 30.3 7.7 111 5-125 92-244 (339)
431 3gbv_A Putative LACI-family tr 58.2 66 0.0023 25.8 9.3 91 5-95 28-143 (304)
432 3p6l_A Sugar phosphate isomera 58.2 30 0.001 27.9 7.2 91 4-98 64-167 (262)
433 3m47_A Orotidine 5'-phosphate 58.0 32 0.0011 28.4 7.4 137 29-197 31-171 (228)
434 2bmb_A Folic acid synthesis pr 57.8 16 0.00054 34.7 6.0 72 71-169 247-336 (545)
435 2qde_A Mandelate racemase/muco 57.8 29 0.00098 30.7 7.5 30 48-78 228-258 (397)
436 1chr_A Chloromuconate cycloiso 57.8 46 0.0016 29.1 8.8 76 12-87 211-291 (370)
437 1dbq_A Purine repressor; trans 57.8 48 0.0016 26.6 8.3 90 5-95 26-134 (289)
438 3heb_A Response regulator rece 57.6 50 0.0017 23.7 11.0 82 84-206 56-141 (152)
439 2cw6_A Hydroxymethylglutaryl-C 57.3 89 0.003 26.5 11.0 107 71-200 82-197 (298)
440 4af0_A Inosine-5'-monophosphat 57.2 28 0.00094 33.2 7.5 112 26-170 283-414 (556)
441 3jte_A Response regulator rece 57.1 48 0.0016 23.4 11.8 105 52-204 20-127 (143)
442 3g85_A Transcriptional regulat 57.0 9.1 0.00031 31.1 3.8 90 5-95 31-135 (289)
443 1gud_A ALBP, D-allose-binding 56.9 76 0.0026 25.6 10.0 89 5-94 20-140 (288)
444 3o07_A Pyridoxine biosynthesis 56.8 2.4 8.1E-05 37.3 0.1 48 105-172 184-232 (291)
445 3sgv_B Undecaprenyl pyrophosph 56.4 81 0.0028 26.9 9.7 80 4-84 49-160 (253)
446 3nl6_A Thiamine biosynthetic b 56.0 1.3E+02 0.0045 28.1 12.3 58 117-199 107-168 (540)
447 3l5a_A NADH/flavin oxidoreduct 55.9 1.1E+02 0.0039 27.5 11.2 91 59-172 242-349 (419)
448 3chv_A Prokaryotic domain of u 55.7 12 0.00042 32.5 4.5 43 152-200 37-79 (284)
449 2y7e_A 3-keto-5-aminohexanoate 55.7 9.3 0.00032 33.2 3.7 43 152-200 37-79 (282)
450 4dbe_A Orotidine 5'-phosphate 55.6 43 0.0015 27.6 7.8 120 27-168 14-141 (222)
451 3ixl_A Amdase, arylmalonate de 55.3 59 0.002 26.9 8.6 109 7-126 89-212 (240)
452 2zad_A Muconate cycloisomerase 55.2 34 0.0012 29.5 7.4 30 48-78 223-253 (345)
453 3glc_A Aldolase LSRF; TIM barr 55.1 1E+02 0.0035 26.6 11.9 115 28-171 130-259 (295)
454 3i3w_A Phosphoglucosamine muta 54.8 25 0.00086 31.9 6.7 54 120-195 174-228 (443)
455 2ztj_A Homocitrate synthase; ( 54.8 65 0.0022 28.6 9.3 99 50-173 118-223 (382)
456 3cs3_A Sugar-binding transcrip 54.7 23 0.0008 28.5 5.9 89 5-95 27-126 (277)
457 1gvf_A Tagatose-bisphosphate a 54.7 80 0.0027 27.3 9.6 34 36-69 15-52 (286)
458 3lab_A Putative KDPG (2-keto-3 54.7 19 0.00066 30.1 5.4 76 6-87 96-181 (217)
459 2pgw_A Muconate cycloisomerase 54.7 94 0.0032 27.1 10.3 82 36-126 163-249 (384)
460 3dx5_A Uncharacterized protein 54.5 76 0.0026 25.7 9.2 92 3-97 48-174 (286)
461 3kjx_A Transcriptional regulat 54.4 27 0.00093 29.3 6.5 90 5-95 87-193 (344)
462 3e49_A Uncharacterized protein 54.3 9.8 0.00033 33.5 3.7 43 152-199 35-77 (311)
463 1qwg_A PSL synthase;, (2R)-pho 54.3 62 0.0021 27.7 8.6 147 29-197 32-197 (251)
464 2vsy_A XCC0866; transferase, g 54.1 40 0.0014 30.3 7.9 63 5-68 419-485 (568)
465 2pp0_A L-talarate/galactarate 54.0 24 0.00083 31.3 6.3 31 48-79 259-290 (398)
466 1yx1_A Hypothetical protein PA 53.9 46 0.0016 26.9 7.7 93 4-97 52-165 (264)
467 1jx6_A LUXP protein; protein-l 53.8 79 0.0027 26.1 9.3 90 5-94 63-182 (342)
468 3eul_A Possible nitrate/nitrit 53.8 46 0.0016 23.9 7.0 69 71-171 49-119 (152)
469 2og9_A Mandelate racemase/muco 53.6 25 0.00086 31.1 6.4 105 5-122 194-313 (393)
470 4dyk_A Amidohydrolase; adenosi 53.6 35 0.0012 29.7 7.3 109 3-128 202-311 (451)
471 2qq6_A Mandelate racemase/muco 53.6 23 0.00079 31.5 6.1 32 47-79 248-280 (410)
472 3nwr_A A rubisco-like protein; 53.5 43 0.0015 30.8 8.0 144 4-168 148-318 (432)
473 2pln_A HP1043, response regula 53.1 45 0.0015 23.4 6.7 78 5-90 31-112 (137)
474 3ble_A Citramalate synthase fr 53.0 70 0.0024 27.8 9.1 139 31-200 50-210 (337)
475 2ob3_A Parathion hydrolase; me 53.0 28 0.00095 30.0 6.4 64 52-124 154-219 (330)
476 2bmb_A Folic acid synthesis pr 52.8 1.5E+02 0.0053 27.9 14.7 50 15-65 310-362 (545)
477 3uug_A Multiple sugar-binding 52.6 61 0.0021 26.6 8.3 90 5-94 22-138 (330)
478 3cz5_A Two-component response 52.4 62 0.0021 23.2 8.6 73 71-175 39-113 (153)
479 2f6k_A Metal-dependent hydrola 52.3 67 0.0023 26.3 8.5 93 6-98 78-209 (307)
480 3no5_A Uncharacterized protein 52.3 24 0.00082 30.4 5.8 136 3-164 125-261 (275)
481 2h6r_A Triosephosphate isomera 52.2 56 0.0019 26.6 7.9 41 5-45 100-141 (219)
482 2o20_A Catabolite control prot 52.0 1E+02 0.0034 25.5 11.7 90 5-95 82-188 (332)
483 2hzg_A Mandelate racemase/muco 51.7 41 0.0014 29.7 7.5 77 12-88 218-300 (401)
484 3lot_A Uncharacterized protein 51.5 15 0.00051 32.4 4.4 43 152-199 35-77 (314)
485 1icp_A OPR1, 12-oxophytodienoa 51.4 99 0.0034 27.4 9.9 92 50-168 226-329 (376)
486 3kyj_B CHEY6 protein, putative 51.1 36 0.0012 24.3 5.9 73 78-176 51-124 (145)
487 3e02_A Uncharacterized protein 51.1 9.8 0.00034 33.5 3.2 43 152-199 35-77 (311)
488 2oz8_A MLL7089 protein; struct 51.0 1.3E+02 0.0044 26.4 10.8 24 12-35 213-238 (389)
489 1qo2_A Molecule: N-((5-phospho 51.0 37 0.0013 27.6 6.6 41 45-90 59-99 (241)
490 1chr_A Chloromuconate cycloiso 51.0 1.2E+02 0.0041 26.4 10.4 79 39-126 164-247 (370)
491 3brs_A Periplasmic binding pro 50.9 54 0.0018 26.3 7.6 91 5-95 26-139 (289)
492 3ooq_A Amidohydrolase; structu 50.7 82 0.0028 27.0 9.2 68 49-129 210-277 (396)
493 1yac_A Ycacgp, YCAC gene produ 50.4 66 0.0023 25.8 8.0 76 3-97 38-115 (208)
494 2pge_A MENC; OSBS, NYSGXRC, PS 50.3 30 0.001 30.4 6.3 83 4-87 224-313 (377)
495 3khd_A Pyruvate kinase; malari 50.3 21 0.00072 33.7 5.4 88 4-92 244-355 (520)
496 3b2n_A Uncharacterized protein 50.2 53 0.0018 23.0 6.7 82 71-197 37-120 (133)
497 2g0w_A LMO2234 protein; putati 50.2 32 0.0011 28.6 6.2 94 4-97 69-186 (296)
498 4dzh_A Amidohydrolase; adenosi 50.1 47 0.0016 29.4 7.6 109 3-128 209-318 (472)
499 4e7p_A Response regulator; DNA 49.9 43 0.0015 24.0 6.3 68 71-170 54-123 (150)
500 3c6c_A 3-keto-5-aminohexanoate 49.8 14 0.00047 32.7 3.9 44 152-200 51-94 (316)
No 1
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=100.00 E-value=1.1e-63 Score=443.45 Aligned_cols=204 Identities=47% Similarity=0.756 Sum_probs=184.1
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
++||++|+++|+++||+|+||+||+++++++++++|++||||++++|++||+++|+++|||+|||||++|++||+.|+++
T Consensus 77 ~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~~~t~~ei~~ave~ 156 (285)
T 3sz8_A 77 DEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEIADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSK 156 (285)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHTSSCEEEECCTTSCGGGTHHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 027740 82 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 159 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv 159 (219)
|++.||++|+|||||++|+|+++.+||++|+.||+ | ++||+|||||++|+|++ .++.++|+|+++..+++||+
T Consensus 157 i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~-----~~~~s~G~r~~v~~~a~AAv 231 (285)
T 3sz8_A 157 CGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDP-----LGDASGGRRRQVLDLARAGI 231 (285)
T ss_dssp HHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC--------------------HHHHHHHHH
T ss_pred HHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCC-----cCCCCCCchhhHHHHHHHHH
Confidence 99999999999999999999888899999999999 8 59999999999999974 48889999999999999999
Q ss_pred HcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCccc
Q 027740 160 AVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGKQRM 210 (219)
Q Consensus 160 alGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~~~~~ 210 (219)
|+||+|+|||+||||||+|+||++||+|+||++|++++|++++++|+...+
T Consensus 232 A~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i~~i~~~lg~~~~~ 282 (285)
T 3sz8_A 232 AVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQMKAIDDLVKRMPAL 282 (285)
T ss_dssp HHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHHHHHHHHHTTCCCC
T ss_pred HhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHHHHHHHHhCCcccc
Confidence 999999999999999999999999999999999999999999999987654
No 2
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=100.00 E-value=1.9e-63 Score=442.72 Aligned_cols=208 Identities=49% Similarity=0.800 Sum_probs=193.9
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
++||++|+++|+++||+|+||+||+.+++++++++|++||||++|+|++||+++|+++|||+|||||++|++||+.|+++
T Consensus 74 ~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~vd~lkIgA~~~~n~~LLr~~a~~gkPVilK~G~~~t~~e~~~ave~ 153 (288)
T 3tml_A 74 DEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFLAPHDMKNVIDK 153 (288)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHcCC------CcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHH
Q 027740 82 VRLAGN------PNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIA 155 (219)
Q Consensus 82 i~~~Gn------~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~ 155 (219)
|++.|| ++|+|||||++|+|++..+||++|+.||+|++||++||||++|+|++ .++.++|+|+++..++
T Consensus 154 i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~pV~~D~sHs~q~p~~-----~~~~s~G~r~~v~~~a 228 (288)
T 3tml_A 154 ARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRETNAPVVFDATHSVQLPGG-----QGTSSGGQREFVPVLA 228 (288)
T ss_dssp HHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGGGSSCEEEEHHHHTCCCC-------------CTTHHHHHH
T ss_pred HHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHhcCCcEEEcCCcccccCCc-----ccCCCCCchhhHHHHH
Confidence 999999 99999999999988776789999999998999999999999999974 4788899999999999
Q ss_pred HHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCccccccC
Q 027740 156 RTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGKQRMNIDL 214 (219)
Q Consensus 156 ~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~~~~~~~~~ 214 (219)
+||+|+||+|+|||+||||||+|+||++||+|+||++|++++|++++++|+...+++++
T Consensus 229 ~AAvA~GadGl~iE~H~~pd~al~D~~~sl~p~el~~lv~~ir~i~~alg~~~~~~~~~ 287 (288)
T 3tml_A 229 RAAVATGVAGLFMETHPNPAEAKSDGPNAVPLNRMGALLETLVTLDQAVKRNPFLENDF 287 (288)
T ss_dssp HHHHHHCCSEEEEEEESSGGGCSSCGGGCEEGGGHHHHHHHHHHHHHHHHSSCCGGGGC
T ss_pred HHHHHcCCCEEEEeeccChhhcCCchhhcCCHHHHHHHHHHHHHHHHHhCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999998887765
No 3
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=100.00 E-value=1.5e-62 Score=438.16 Aligned_cols=199 Identities=49% Similarity=0.854 Sum_probs=186.8
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
++||++|+++|+++||+|+||+||+++++++++++|++||||++++|++||+++|+++|||+|||||++|++||+.|+++
T Consensus 98 ~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~vd~lkIgA~~~~n~~LLr~va~~gkPVilK~Gms~t~~ei~~ave~ 177 (298)
T 3fs2_A 98 EKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPVVDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAK 177 (298)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTTCSEEEECGGGTTCHHHHHHHHHTTSEEEEECCTTCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhCCEEEECccccCCHHHHHHHHccCCcEEEeCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc
Q 027740 82 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV 161 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAval 161 (219)
|++.||++|+|||||++|+|++..+||++|+.||+|++||+|||||++|+|++ .++.++|+|+++..+++||+|+
T Consensus 178 i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~~~~PV~~D~sHsvq~p~~-----~~~~s~G~r~~v~~~a~AAvAl 252 (298)
T 3fs2_A 178 ITESGNPNVLATERGVSFGYNTLVSDMRALPIMAGLGAPVIFDATHSVQQPGG-----QGGSTGGQREFVETLARAAVAV 252 (298)
T ss_dssp HHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHTTTSCEEEEHHHHTCCCC-------------CGGGHHHHHHHHHHH
T ss_pred HHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHHcCCcEEEcCCCccccCCc-----ccCCCCCchhhHHHHHHHHHHc
Confidence 99999999999999999988877799999999999999999999999999974 4788899999999999999999
Q ss_pred CCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC
Q 027740 162 GVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSK 205 (219)
Q Consensus 162 GA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg 205 (219)
||+|+|||+||||||+|+||++||+|+||++|++++|+++++++
T Consensus 253 GAdGl~IE~H~tpd~al~D~~~sl~p~el~~lv~~ir~i~~a~~ 296 (298)
T 3fs2_A 253 GVAGFFIETHEDPDNAPSDGPNMVPIDKMPALLEKLMAFDRIAK 296 (298)
T ss_dssp CCSEEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEecCChhccCCchhhcCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999886
No 4
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=100.00 E-value=4.8e-61 Score=426.07 Aligned_cols=207 Identities=48% Similarity=0.760 Sum_probs=173.8
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
++||++|+++|+++||+|+||+||+.+++++++++|++||||++++|++||+++|+++|||+|||||++|++||+.|+++
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~~d~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~A~~~ 151 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEK 151 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHCSEEEECGGGTTBHHHHHHHHHTCCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHHcCCCcEEEECCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 027740 82 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 159 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv 159 (219)
+++.||++++|||||++|+|+++++||++|+.||+ | ++||++||||++|+|++ .++.+.|+|+++..+++||+
T Consensus 152 i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~-----~~~~s~g~~~~~~~~a~aav 226 (280)
T 2qkf_A 152 FHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDA-----GSAASGGRRAQALDLALAGM 226 (280)
T ss_dssp HHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCEEEEHHHHCC---------------CHHHHHHHHHHHHH
T ss_pred HHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCEEEECCCCccccCc-----cccccCCchhhHHHHHHHHH
Confidence 99999999999999999999888899999999999 8 99999999999999984 58888899999999999999
Q ss_pred HcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCcccccc
Q 027740 160 AVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGKQRMNID 213 (219)
Q Consensus 160 alGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~~~~~~~~ 213 (219)
++||+|+|||+||||||+++||++|++|+||++|++.+|.+++++|+++.+++|
T Consensus 227 a~Ga~G~~IE~H~~~d~al~D~~~sl~p~~l~~lv~~i~~~~~~~g~~~~~~~e 280 (280)
T 2qkf_A 227 ATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPILTIE 280 (280)
T ss_dssp TTCCSEEEEEC----------------CCHHHHHHHHHHHHHHHHHHSCCC---
T ss_pred HcCCCEEEEeecCCcccCCCccccCCCHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999998777765
No 5
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=100.00 E-value=4.9e-60 Score=421.83 Aligned_cols=205 Identities=46% Similarity=0.745 Sum_probs=186.5
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
++||++|+++|+++||+|+||+||+.+++++++++|++||||++++|++||+++|+++|||+|||||++|++||+.|+++
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~vd~~kIgA~~~~n~~Ll~~~a~~~kPV~lk~G~~~t~~ei~~Av~~ 154 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVADVVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEK 154 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhcCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 027740 82 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 159 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv 159 (219)
|++.||++++|||||++|+|+++++||++|+.||+ | ++||+|||||++|+|++ .++.+.|+|+++..+++||+
T Consensus 155 i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~-----~~~~~~g~~~~~~~ia~aAv 229 (292)
T 1o60_A 155 IEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDP-----FGAASSGRRAQVTELARSGL 229 (292)
T ss_dssp HHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC-----------------CTTHHHHHHHHH
T ss_pred HHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCEEEECCCcccccCc-----cccCCCCChhHHHHHHHHHH
Confidence 99999999999999999999888899999999999 8 99999999999999974 58888999999999999999
Q ss_pred HcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCcccc
Q 027740 160 AVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKGKQRMN 211 (219)
Q Consensus 160 alGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~~~~~~ 211 (219)
++||+|+|||+||||||+++||++|++|+||++||+.+|++++++|+...++
T Consensus 230 a~Ga~Gl~IE~H~~~d~al~Dg~~sl~p~~l~~lv~~ir~i~~a~g~~~~~~ 281 (292)
T 1o60_A 230 AVGIAGLFLEAHPNPNQAKCDGPSALPLSALEGFVSQMKAIDDLVKSFPELD 281 (292)
T ss_dssp HHCCSEEEEEEESSGGGCSSCCTTCEEGGGHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HcCCCEEEEEecCCcccCCchhhcCCCHHHHHHHHHHHHHHHHHhCCchhcc
Confidence 9999999999999999999999999999999999999999999999744333
No 6
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=100.00 E-value=9.4e-58 Score=402.64 Aligned_cols=205 Identities=50% Similarity=0.759 Sum_probs=190.1
Q ss_pred ChhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 027740 1 MVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 1 ~~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e 80 (219)
+++||++|+++|+++||+|+||+||+.+++++++++|++||||++++|++||+++|+++|||+|||||++|++||+.|++
T Consensus 60 ~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~vd~~~IgA~~~rn~~ll~~~a~~~~PV~lK~G~~~t~~e~~~Av~ 139 (267)
T 2nwr_A 60 LEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVE 139 (267)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHTTTSEEEEECCTTCCGGGGHHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhcCCEEEECcccccCHHHHHHHHcCCCcEEEeCCCCCCHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH
Q 027740 81 KVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA 160 (219)
Q Consensus 81 ~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAva 160 (219)
++++.||++++|||||++|+|+++.+|+++|+.||+.+ ||++|+||++|+|++ .++.+.|+++++..++++|++
T Consensus 140 ~i~~~GN~~i~L~~rG~~~~y~~~~~dl~~i~~lk~~~-pVivD~sH~~q~p~G-----~s~hs~g~~~~~~~ia~aava 213 (267)
T 2nwr_A 140 KLKFGGAKEIYLTERGTTFGYNNLVVDFRSLPIMKQWA-KVIYDATHSVQLPGG-----LGDKSGGMREFIFPLIRAAVA 213 (267)
T ss_dssp HHHHTTCSSEEEEECCEECSSSCEECCTTHHHHHTTTS-EEEEETTGGGCCTTC-----------CCGGGHHHHHHHHHH
T ss_pred HHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHcC-CEEEcCCcccccCCC-----cCcCCCCchhHHHHHHHHHHH
Confidence 99999999999999999999988889999999999866 999999999999974 588889999999999999999
Q ss_pred cCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC-Ccccc
Q 027740 161 VGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKG-KQRMN 211 (219)
Q Consensus 161 lGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~-~~~~~ 211 (219)
+||+|+|||+|||||++++||++|++|++|++|++.+|++++++|+ .++++
T Consensus 214 ~Ga~G~mIE~H~~pd~al~Dg~qsl~p~~l~~l~~~i~~~~~~~g~~~~~~~ 265 (267)
T 2nwr_A 214 VGCDGVFMETHPEPEKALSDASTQLPLSQLEGIIEAILEIREVASKYYETIP 265 (267)
T ss_dssp HCCSEEEEEEESCGGGCSSCTTTCEEGGGHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred cCCCEEEEEecCCcccCCCccccCCCHHHHHHHHHHHHHHHHHhCCccccCc
Confidence 9999999999999999999999999999999999999999999987 44443
No 7
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=100.00 E-value=1.3e-55 Score=401.29 Aligned_cols=182 Identities=16% Similarity=0.120 Sum_probs=175.1
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e 80 (219)
.+++++|+++|+++||+|+|||||++++++++++ +|+|||||++++|++||+++|++||||||||||+ |++||+.|++
T Consensus 90 ~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGma-t~~Ei~~Ave 168 (349)
T 2wqp_A 90 EEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMN-SIESIKKSVE 168 (349)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC-CHHHHHHHHH
Confidence 4789999999999999999999999999999999 9999999999999999999999999999999999 9999999999
Q ss_pred HHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 027740 81 KVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 158 (219)
Q Consensus 81 ~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aA 158 (219)
+|++.|| +|+||||+++||++++++||++|+.||+ | |+|||+ |||+. | ..+++||
T Consensus 169 ~i~~~G~-~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~-sdHt~----------------G-----~~~~~AA 225 (349)
T 2wqp_A 169 IIREAGV-PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGL-SDHTL----------------D-----NYACLGA 225 (349)
T ss_dssp HHHHHTC-CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEE-ECCSS----------------S-----SHHHHHH
T ss_pred HHHHcCC-CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEe-CCCCC----------------c-----HHHHHHH
Confidence 9999999 9999999999988889999999999999 9 999986 99995 6 6899999
Q ss_pred HHcCCcEEEEeeecCCCCCC--CCCCCCCChHHHHHHHHHHHHHHHHhCCCcc
Q 027740 159 IAVGVDGVFMEVHDDPLNAP--VDGPTQWPLRNLEELLEELVAIAKVSKGKQR 209 (219)
Q Consensus 159 valGA~GlvIEkH~t~d~a~--~D~~~sl~p~el~~lv~~ir~i~~~lg~~~~ 209 (219)
+|+||+ ||||||||||++ +||++||+|+||++||+.+|.++.++|+..+
T Consensus 226 vAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~~~k 276 (349)
T 2wqp_A 226 VALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD 276 (349)
T ss_dssp HHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSCCTT
T ss_pred HHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999 999999999999 7999999999999999999999999998543
No 8
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=100.00 E-value=9.2e-56 Score=391.59 Aligned_cols=185 Identities=30% Similarity=0.445 Sum_probs=177.6
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
++||++|+++|+++||+|+|||||+.+++++++++|++||||++++|++||+++|++||||+|||||++|++||+.|+++
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~ 167 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEY 167 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCcEEEEe-ecCCC-CCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 027740 82 VRLAGNPNVMVCE-RGTMF-GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 158 (219)
Q Consensus 82 i~~~Gn~~i~L~~-cgs~~-~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aA 158 (219)
|++.||++++||| |+++| +|+++++||++|+.||+ ||+||++||||++ |.++++..+++||
T Consensus 168 i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~----------------g~~~~~~~~~~aA 231 (276)
T 1vs1_A 168 ILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPA----------------GRRSLVPALAKAG 231 (276)
T ss_dssp HHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHH----------------CSGGGHHHHHHHH
T ss_pred HHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCC----------------CccchHHHHHHHH
Confidence 9999999999999 54578 67889999999999999 8999999999995 8899999999999
Q ss_pred HHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 027740 159 IAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAK 202 (219)
Q Consensus 159 valGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~ 202 (219)
+|+||+|+|||+|||||++++||++|++|+||++|++.+|++++
T Consensus 232 va~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i~~~~~ 275 (276)
T 1vs1_A 232 LAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELRWHRL 275 (276)
T ss_dssp HHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHHHHTTC
T ss_pred HHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998764
No 9
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=100.00 E-value=5.5e-55 Score=401.18 Aligned_cols=184 Identities=11% Similarity=0.080 Sum_probs=175.9
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e 80 (219)
.+++++|+++|+++||+|+|||||++++++++++ +|+|||||++++|+|||+++|++||||||||||+ |++||+.|++
T Consensus 100 ~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGma-Tl~Ei~~Ave 178 (385)
T 1vli_A 100 AEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGA-EISDVHEAWR 178 (385)
T ss_dssp GGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC-CHHHHHHHHH
Confidence 3789999999999999999999999999999999 9999999999999999999999999999999999 9999999999
Q ss_pred HHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 027740 81 KVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 158 (219)
Q Consensus 81 ~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aA 158 (219)
+|++.||++|+||||+++||++++++||++|+.||+ | ++|||+ |||+. |+ ..+++||
T Consensus 179 ~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~-SdHt~----------------G~----~~~~~AA 237 (385)
T 1vli_A 179 TIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGF-SDHSE----------------HP----TEAPCAA 237 (385)
T ss_dssp HHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEE-EECCS----------------SS----SHHHHHH
T ss_pred HHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEe-CCCCC----------------Cc----hHHHHHH
Confidence 999999999999999999998889999999999999 9 999986 99995 53 4789999
Q ss_pred HHcCCcEEEEeeecCCCCCC--CCCCCCCChHHHHHHHHHHHHHH-------------HHhCCCcc
Q 027740 159 IAVGVDGVFMEVHDDPLNAP--VDGPTQWPLRNLEELLEELVAIA-------------KVSKGKQR 209 (219)
Q Consensus 159 valGA~GlvIEkH~t~d~a~--~D~~~sl~p~el~~lv~~ir~i~-------------~~lg~~~~ 209 (219)
||+||+ ||||||||||++ +||++||+|+||++||+.+|.++ +++|+..+
T Consensus 238 vAlGA~--iIEkHftldra~~G~D~~~SL~P~ef~~lv~~ir~i~~~~~~~~~~~~~~~alG~~~k 301 (385)
T 1vli_A 238 VRLGAK--LIEKHFTIDKNLPGADHSFALNPDELKEMVDGIRKTEAELKQGITKPVSEKLLGSSYK 301 (385)
T ss_dssp HHTTCS--EEEEEBCSCTTSSCSSCTTSBCHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHCCSSC
T ss_pred HHcCCC--EEEeCCCccccCCCCchhhhCCHHHHHHHHHHHHHHHhhcccccccchHHHHhCcccC
Confidence 999999 999999999999 79999999999999999999999 99998543
No 10
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=100.00 E-value=4.6e-55 Score=398.00 Aligned_cols=189 Identities=30% Similarity=0.440 Sum_probs=182.4
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
++||++|+++|+++||+|+|||||+.+++++++++|++|||||+++|++||+++|+++|||+|||||++|++||+.|+++
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~ 235 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEY 235 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCcEEEEeecC-CC-CCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 027740 82 VRLAGNPNVMVCERGT-MF-GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 158 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs-~~-~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aA 158 (219)
|++.||++++|||||+ +| +|+++++||++|+.||+ |++||++||||+. |.++++..+++||
T Consensus 236 i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~----------------G~~~~v~~~a~AA 299 (350)
T 1vr6_A 236 IANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSG----------------GRRDLVIPLSRAA 299 (350)
T ss_dssp HHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHH----------------CSGGGHHHHHHHH
T ss_pred HHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCC----------------cccchHHHHHHHH
Confidence 9999999999998777 58 56688999999999999 8999999999995 8899999999999
Q ss_pred HHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 027740 159 IAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKG 206 (219)
Q Consensus 159 valGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~ 206 (219)
+|+||+|+|||+|||||++++||++||+|++|++|++.+|.+++++|+
T Consensus 300 vA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir~i~~alg~ 347 (350)
T 1vr6_A 300 IAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKLADALGV 347 (350)
T ss_dssp HHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999999999999986
No 11
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=100.00 E-value=5.5e-54 Score=377.52 Aligned_cols=185 Identities=31% Similarity=0.467 Sum_probs=177.6
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
.+||++|+++|+++||+|+|||||+.+++++++++|++||||++++|++||+++|+++|||+|||||++|++||..|+++
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~ 152 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEY 152 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhhCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCcEEEEeecC-CC-CCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 027740 82 VRLAGNPNVMVCERGT-MF-GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 158 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs-~~-~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aA 158 (219)
+++.||++++|||||. +| +|+++++||++++.||+ |++||++||||+. |.+++++.++++|
T Consensus 153 i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~----------------g~~~~v~~~~~aA 216 (262)
T 1zco_A 153 IMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPA----------------GRRSLVIPLAKAA 216 (262)
T ss_dssp HHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTT----------------CSGGGHHHHHHHH
T ss_pred HHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCC----------------CccchHHHHHHHH
Confidence 9999999999999994 35 78888999999999999 8999989999995 7889999999999
Q ss_pred HHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 027740 159 IAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAK 202 (219)
Q Consensus 159 valGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~ 202 (219)
+++||+|+|||+||||||+++||++|++|+||++|++.+|++++
T Consensus 217 va~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~~~~ 260 (262)
T 1zco_A 217 YAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEALGW 260 (262)
T ss_dssp HHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHHTTC
T ss_pred HHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998864
No 12
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=100.00 E-value=1.7e-54 Score=398.78 Aligned_cols=189 Identities=31% Similarity=0.471 Sum_probs=178.4
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
.+||++|+++|+++||+|+|||||+.+++++++++|++||||++++|++||+++|++||||+|||||++|++||+.|+++
T Consensus 192 ~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~ 271 (385)
T 3nvt_A 192 LEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEY 271 (385)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999997799999999999
Q ss_pred HHHcCCCcEEEEeecC-CCCC-CCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 027740 82 VRLAGNPNVMVCERGT-MFGY-NDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 158 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs-~~~~-~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aA 158 (219)
|++.||++++|||||+ +||. +.+++||++|+.||+ ||+||++|+||+. |+|++++.+++||
T Consensus 272 i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~----------------G~r~~v~~~a~AA 335 (385)
T 3nvt_A 272 IMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHST----------------GRKDLLLPCAKAA 335 (385)
T ss_dssp HHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHH----------------CCGGGHHHHHHHH
T ss_pred HHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCC----------------CccchHHHHHHHH
Confidence 9999999999999965 5754 678899999999999 9999988888874 8899999999999
Q ss_pred HHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 027740 159 IAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKG 206 (219)
Q Consensus 159 valGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~ 206 (219)
+|+||+|+|||+|||||++++||++|++|++|++||+.+|.++.+++.
T Consensus 336 vA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i~~i~~~~~~ 383 (385)
T 3nvt_A 336 LAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILASNLVPHK 383 (385)
T ss_dssp HHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHHHHHTCCC--
T ss_pred HHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999987653
No 13
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=1.2e-53 Score=388.35 Aligned_cols=183 Identities=11% Similarity=0.007 Sum_probs=172.4
Q ss_pred hhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 027740 2 VEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 2 ~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e 80 (219)
.+++++|+++|+++||+|+|||||++++++++++ +|+|||||++++|+|||+++|++||||||||||+ |++||+.|++
T Consensus 77 ~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGms-tl~Ei~~Ave 155 (350)
T 3g8r_A 77 PEQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGA-RREDIDKVVS 155 (350)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCC-CHHHHHHHHH
Confidence 4789999999999999999999999999999999 9999999999999999999999999999999999 9999999999
Q ss_pred HHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHH
Q 027740 81 KVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTA 158 (219)
Q Consensus 81 ~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aA 158 (219)
+|++.|| +++||||.+.||++.+++||++|+.||+ | ++|||+ |||+. |.+ ..+++||
T Consensus 156 ~i~~~g~-~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~-SdHt~----------------g~~---~~~~~AA 214 (350)
T 3g8r_A 156 FMLHRGK-DLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGY-STHED----------------PDL---MEPIMLA 214 (350)
T ss_dssp HHHTTTC-CEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEE-EECCC----------------SSC---CHHHHHH
T ss_pred HHHHcCC-CEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEc-CCCCC----------------CCc---cHHHHHH
Confidence 9999998 6999999999998889999999999999 9 899997 99995 211 3567899
Q ss_pred HHcCCcEEEEeeecCCCC-CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCc
Q 027740 159 IAVGVDGVFMEVHDDPLN-APVDGPTQWPLRNLEELLEELVAIAKVSKGKQ 208 (219)
Q Consensus 159 valGA~GlvIEkH~t~d~-a~~D~~~sl~p~el~~lv~~ir~i~~~lg~~~ 208 (219)
||+||+ |||||||||| .++||++||+|+||++||+.+|.++.++|+.+
T Consensus 215 vAlGA~--vIEkH~tldr~~g~D~~~Sl~P~ef~~lv~~ir~i~~alG~~~ 263 (350)
T 3g8r_A 215 VAQGAT--VFEKHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGDGE 263 (350)
T ss_dssp HHTTCC--EEEEEBCCCBTTBCCCTTCBCHHHHHHHHHHHHHHHHHHCCTT
T ss_pred HHcCCC--EEEEecCcccCCCCcccccCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 999997 9999999999 57899999999999999999999999999964
No 14
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=100.00 E-value=1.4e-35 Score=268.99 Aligned_cols=169 Identities=18% Similarity=0.188 Sum_probs=154.6
Q ss_pred ChhHHHHHHHH---HHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 1 MVEGLKILEKV---KIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 1 ~~~gl~~L~~~---~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
+++||++++++ ..++|+|+.||++|+.+++++++++||++||+|+++|+++++.++++++||++|+|+++++++|.+
T Consensus 119 i~~GL~ilr~ll~~~~e~GlPv~TEvld~~~~~~vad~vd~~qIGAR~~esq~hr~~asg~~~PVg~Kngt~g~i~~~l~ 198 (350)
T 1n8f_A 119 INDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAID 198 (350)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECCCSSTHHHHGGGCSEEEECTTTTTCHHHHHHHHTCSSCEEEECCTTCCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEeecCcccHHHHhhcCcEEEECCccccCHHHHHHHhcCCCeEEEecCCCCCHHHHHH
Confidence 37899999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H------------------HHHHHHcCCCcEEEEeecCCCCCCCCCccchhHH-HHHhcCCC--EEEcCCCCCCCCCCCc
Q 027740 78 S------------------AEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLE-WMREANCP--VVADVTHSLQQPAGKK 136 (219)
Q Consensus 78 A------------------~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~-~lk~~~~p--V~~ds~Hs~~~~~~~~ 136 (219)
| +++|.+.||++++||+||.+ +|+...+|+++++ .|++.++| |++|+||++
T Consensus 199 Ai~aa~~~h~fl~~~~~G~~~~v~t~GN~~~~lilRG~~-~~ny~~~di~~~~~~l~~~~lp~~VivD~SH~n------- 270 (350)
T 1n8f_A 199 AINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGK-EPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHAN------- 270 (350)
T ss_dssp HHHHHTSCCEEEEECTTSBEEEEEECCCSCEEEEECCSS-SCCCSHHHHHHHHHHHHHTTCCCCEEEECSGGG-------
T ss_pred HHHHHhCCceeeeeCCCCcEEEEECCCCCCEEEEECCCC-CCCCCHHHHHHHHHHHHHcCCCCeEEEECCCcc-------
Confidence 9 88999999999999999987 3333568999999 78888999 999999997
Q ss_pred cCCCCccCCCCcccHHHHHHHHHHcCC---cEEEEeeecCCCCCCCCCCCCCCh
Q 027740 137 LDGGGVASGGLRELIPCIARTAIAVGV---DGVFMEVHDDPLNAPVDGPTQWPL 187 (219)
Q Consensus 137 ~~~~~~~~~G~~~~~~~~~~aAvalGA---~GlvIEkH~t~d~a~~D~~~sl~p 187 (219)
+++.++|+++++..++ ++++.|+ +|+|||+| ++|++|++++
T Consensus 271 ---s~k~~~~Q~~vv~~la-a~ia~G~~~i~GlmiEsh------l~dG~Q~l~~ 314 (350)
T 1n8f_A 271 ---SSKQFKKQMDVCADVC-QQIAGGEKAIIGVMVESH------LVEGNQSLES 314 (350)
T ss_dssp ---TTTCGGGHHHHHHHHH-HHHHTTCCSEEEEEEEBC------SSSBBCCSSS
T ss_pred ---cCccccccHHHHHHHH-HHHHcCCCcccEEEEEec------cCCCCcCCCC
Confidence 3677788888999999 9999999 99999999 6666666655
No 15
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=100.00 E-value=1.4e-33 Score=256.99 Aligned_cols=169 Identities=18% Similarity=0.209 Sum_probs=146.9
Q ss_pred hhHHHHHHHHH---HhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 027740 2 VEGLKILEKVK---IAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 2 ~~gl~~L~~~~---~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A 78 (219)
++||++++++. .++|+|+.||++|+.+++++.+++.|.+||+|+++|+.+++.++++++||++|+|+++++++|.+|
T Consensus 135 ~~GL~i~r~ll~~v~e~GlPvaTEvld~~~~qyv~Dllsw~aIGARt~esq~hre~Asgl~~PVg~Kngt~g~i~~~~~A 214 (370)
T 1of8_A 135 NKGLQSARQLFVNLTNIGLPIGSEMLDTISPQYLADLVSFGAIGARTTESQLHRELASGLSFPVGFKNGTDGTLNVAVDA 214 (370)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEECCSSSTHHHHGGGCSEEEECTTTTTCHHHHHHHHTCSSCEEEECCTTSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCceEEeecCcccHHHHHHHHhhccccCcccccHHHHHHHhcCCCeEEEcCCCCCCHHHHHHH
Confidence 58999988887 899999999999999999998888899999999999999999999999999999999999999999
Q ss_pred ------------------HHHHHHcCCCcEEEEeecCC-C-CCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccC
Q 027740 79 ------------------AEKVRLAGNPNVMVCERGTM-F-GYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLD 138 (219)
Q Consensus 79 ------------------~e~i~~~Gn~~i~L~~cgs~-~-~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~ 138 (219)
+++|.+.||++++||+||.+ | +|+.+.+|+ +...|+++++||++|+||++
T Consensus 215 i~aa~~~H~Fl~v~~~G~a~~v~t~GN~~~~lilRG~~~~~nY~~~~vd~-~~~~l~~~~~pVivD~SHan--------- 284 (370)
T 1of8_A 215 CQAAAHSHHFMGVTKHGVAAITTTKGNEHCFVILRGGKKGTNYDAKSVAE-AKAQLPAGSNGLMIDYSHGN--------- 284 (370)
T ss_dssp HHHHTSCCEEEEECTTSBEEEEEECCCSCEEEEECCCTTCCCCSHHHHHH-HHHHCCTTCCCEEEESSGGG---------
T ss_pred HHHHhCCceeeeeCCCCcEEEEEcCCCCCEEEEECCCCCCCCCCHHHHHH-HHHHHHHhCCCEEEeCcccc---------
Confidence 88899999999999999996 6 788778887 55577778999999999996
Q ss_pred CCCccCCCCccc-----HHHHHHHHHHcCCc---EEEEeeecCCCCCCCCCCCCCChHHHHHH
Q 027740 139 GGGVASGGLREL-----IPCIARTAIAVGVD---GVFMEVHDDPLNAPVDGPTQWPLRNLEEL 193 (219)
Q Consensus 139 ~~~~~~~G~~~~-----~~~~~~aAvalGA~---GlvIEkH~t~d~a~~D~~~sl~p~el~~l 193 (219)
|.+++ |...++++++.|++ |+|||+|++ |++|++++++|++|
T Consensus 285 -------s~k~~~~Q~~V~~~~~a~ia~G~d~i~GlmiEsh~~------dG~Q~l~~~~~~~L 334 (370)
T 1of8_A 285 -------SNKDFRNQPKVNDVVCEQIANGENAITGVMIESNIN------EGNQGIPAEGKAGL 334 (370)
T ss_dssp -------GTSCGGGHHHHHHHHHHHHHTTCCSEEEEEEEBCSS------SBBCCC-------C
T ss_pred -------hhhhhhhhhHHHHHHHHHHHcCCCcceEEEEEecCC------CCCCCCChhhhhhh
Confidence 55666 88899999999999 999999966 78888877666554
No 16
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=99.88 E-value=4.6e-23 Score=185.94 Aligned_cols=160 Identities=18% Similarity=0.169 Sum_probs=127.9
Q ss_pred hhHHHHHHHH---HHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 027740 2 VEGLKILEKV---KIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 2 ~~gl~~L~~~---~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A 78 (219)
++||++++++ ..++|+|+.||+.|+.++++++++++|.+||||+++|+.+++.++++++||.+|+|+++++++|..|
T Consensus 117 ~~GL~~~R~ll~~~~e~GLpiatE~ld~~~~qyv~dlvs~~aIGARt~enq~hre~asg~s~PVg~Kngt~gti~~ai~A 196 (346)
T 3tqk_A 117 NKGLRLARNLLSDLTNMGLPCATEFLDVITPQYFAELITWGAIGARTVESQVHRELASGLSASIGFKNATNGDVQVAVDA 196 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCSSSGGGGTGGGCSEEEECGGGTTCHHHHHHHTTCSSEEEEECCTTCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEecCcCCHHHHHHHhheeeeCcccccCHHHHHHhcCCCCceEEeCCCCCchHHHhhH
Confidence 6899997764 4899999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HH------------------HHHHcCCCcEEEEeecCCC--CCCCCCccchhHHHHHhc--CCCEEEcCCCCCCCCCCCc
Q 027740 79 AE------------------KVRLAGNPNVMVCERGTMF--GYNDLIVDPRNLEWMREA--NCPVVADVTHSLQQPAGKK 136 (219)
Q Consensus 79 ~e------------------~i~~~Gn~~i~L~~cgs~~--~~~~~~~nl~~i~~lk~~--~~pV~~ds~Hs~~~~~~~~ 136 (219)
+. ++...||++.+++.||..- +|+.++++ .+...|++. +.+|++|+||.+.
T Consensus 197 i~aa~~pH~Fl~~~~~G~~aiv~T~GN~~~HvILRGg~~gpNY~~~~v~-~a~~~l~k~~l~~~imVDcSH~NS------ 269 (346)
T 3tqk_A 197 VKSATYPHHFLSTTKSGSTAIFATKGNQNGHVILRGGASGPNFSKEHVD-DCIAKLKKADINTKVMIDCSHGNS------ 269 (346)
T ss_dssp HHHHTSCCEEEEECTTSCEEEEECCCCSCEEEEECCCTTCCCCSHHHHH-HHHHHHHHTTCCCCEEEESSHHHH------
T ss_pred HHHHhCCceEEeeCCCCcEEEEECCCCCCEEEEecCCCCCCCCCHHHHH-HHHHHHHhCCCCCeEEEecCcccc------
Confidence 88 3567899999999999862 45545554 445556654 4569999999872
Q ss_pred cCCCCccCCCCcccHHHHHH--HHHHcCCcEEEEeeecC
Q 027740 137 LDGGGVASGGLRELIPCIAR--TAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 137 ~~~~~~~~~G~~~~~~~~~~--aAvalGA~GlvIEkH~t 173 (219)
+|.+.-+..++..++. ++ .-.+.|+|||+|..
T Consensus 270 ----~K~~~~Q~~V~~~v~~q~~~-~~~I~GvMiES~l~ 303 (346)
T 3tqk_A 270 ----QKDHSKQISVLADICEQIKH-SNDIFGVMIESNLV 303 (346)
T ss_dssp ----TTCGGGHHHHHHHHHHHHHH-CSSEEEEEEEBCSE
T ss_pred ----cccHHHHHHHHHHHHHHHhc-CCceeeeeHHhhhh
Confidence 3333333334444433 22 56689999999954
No 17
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=96.92 E-value=0.018 Score=50.53 Aligned_cols=175 Identities=13% Similarity=0.096 Sum_probs=102.6
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeC--CCCCC-----------
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA----------- 71 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilst--G~~~t----------- 71 (219)
+.++...++ ++++.-+-++++-++...+. ++++-=-|..-..-.++..+++.|.|+++.. |+.-|
T Consensus 71 pvi~~l~~~-~~piSIDT~~~~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv 149 (280)
T 1eye_A 71 PVVKELAAQ-GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNV 149 (280)
T ss_dssp HHHHHHHHT-TCCEEEECSCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSH
T ss_pred HHHHHhhcC-CCEEEEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHH
Confidence 344444444 99999999999999887776 6765433332234468889999999999943 43222
Q ss_pred ----HHHHHHHHHHHHHcCCC-cEEEEeecCCCCCCCCCccc---hhHHHHHhcCCCEEEcCCCC-CCCCCCCc-cCCC-
Q 027740 72 ----SSVMVNSAEKVRLAGNP-NVMVCERGTMFGYNDLIVDP---RNLEWMREANCPVVADVTHS-LQQPAGKK-LDGG- 140 (219)
Q Consensus 72 ----~~ei~~A~e~i~~~Gn~-~i~L~~cgs~~~~~~~~~nl---~~i~~lk~~~~pV~~ds~Hs-~~~~~~~~-~~~~- 140 (219)
.+++...++.+.+.|.+ +=+++..|.-|.-. ..-|+ +.+..++++++|+.+-.|.- .- ++ +++.
T Consensus 150 ~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~-~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfi----~~~~~~~~ 224 (280)
T 1eye_A 150 VAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKT-AQHNWAILHALPELVATGIPVLVGASRKRFL----GALLAGPD 224 (280)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCC-HHHHHHHHHTHHHHHTTSSCBEECCTTCHHH----HHHTCCSS
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhEEEECCCCcccC-HHHHHHHHHHHHHhhcCCCCEEEEecchHHH----Hhhhcccc
Confidence 56667788888889976 23467888765321 11233 44555555789987743331 00 00 0000
Q ss_pred C-ccCCCCcccH-HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC
Q 027740 141 G-VASGGLRELI-PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSK 205 (219)
Q Consensus 141 ~-~~~~G~~~~~-~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg 205 (219)
+ ..+...|... ...+..|+..||+ +|=.| +.+.+++.++-.+.+.+
T Consensus 225 g~~~~~~~R~~~t~a~~~~a~~~Ga~--Ivrvh-----------------dV~~~~~a~~~~~al~~ 272 (280)
T 1eye_A 225 GVMRPTDGRDTATAVISALAALHGAW--GVRVH-----------------DVRASVDAIKVVEAWMG 272 (280)
T ss_dssp SCCCCGGGGHHHHHHHHHHHHHTTCS--EEEES-----------------CHHHHHHHHHHHHHHHT
T ss_pred CCCCCcccchHHHHHHHHHHHHcCCC--EEEeC-----------------CHHHHHHHHHHHHHHhC
Confidence 0 0001113221 2234466888998 99999 55566666555555444
No 18
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=96.84 E-value=0.038 Score=48.43 Aligned_cols=118 Identities=22% Similarity=0.293 Sum_probs=80.5
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEe--CCCCCC-----------
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIK--KGQFCA----------- 71 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVils--tG~~~t----------- 71 (219)
+.++...++.++++.-+-++++-++...+. ++++-=-|.. ....++..+++.|.|+++. +|...|
T Consensus 80 pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~ 158 (282)
T 1aj0_A 80 PVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVF 158 (282)
T ss_dssp HHHHHHHHHCCCEEEEECCCHHHHHHHHHTTCCEEEETTTT-CSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHH
T ss_pred HHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHH
Confidence 445555566799999999999999987777 7776444443 5557888999999999994 444423
Q ss_pred ---HHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHHH---HhcCCCEEEcCC
Q 027740 72 ---SSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWM---REANCPVVADVT 126 (219)
Q Consensus 72 ---~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~l---k~~~~pV~~ds~ 126 (219)
.+.+...++.+.+.|.+ +| ++..|.-|+- ...-|+..|..+ +++++|+.+-.|
T Consensus 159 ~ev~~~l~~~i~~a~~~Gi~~~~I-ilDPg~gf~k-~~~~n~~ll~~l~~~~~~g~P~l~G~S 219 (282)
T 1aj0_A 159 AEVNRYFIEQIARCEQAGIAKEKL-LLDPGFGFGK-NLSHNYSLLARLAEFHHFNLPLLVGMS 219 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGE-EEECCTTSSC-CHHHHHHHHHTGGGGGGGCSCBEECCT
T ss_pred HHHHHHHHHHHHHHHHcCCChhhE-EEeCCCCccc-CHHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 67778888888999976 55 6677776522 222244333333 346899877433
No 19
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.81 E-value=0.0051 Score=51.43 Aligned_cols=139 Identities=12% Similarity=0.069 Sum_probs=88.0
Q ss_pred HHHHHHHHhcCCCeEee--eCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhc-CCe--EEEeCC--C---------
Q 027740 6 KILEKVKIAYDIPIVTD--VHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKT-GKI--INIKKG--Q--------- 68 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt--~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~-gkP--VilstG--~--------- 68 (219)
..+++.++..++|+... +.++++++.+.+. +|.+-+++..+.|.+++..+.+. |.- +-++.. .
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~ 144 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRD 144 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCC
T ss_pred HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccC
Confidence 56888899999999884 6778888888888 99999999999998777665442 322 223221 0
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecCC-CCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 69 FCASSVMVNSAEKVRLAGNPNVMVCERGTM-FGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 69 ~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~-~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
..+..|+ ++.+...|...+++. .... ..+ .-.|+..+..+++ .++||+.+..-+ .
T Consensus 145 ~~~~~e~---~~~~~~~G~~~i~~~-~~~~~~~~--~g~~~~~~~~i~~~~~ipvia~GGI~-----------------~ 201 (244)
T 1vzw_A 145 GGDLYET---LDRLNKEGCARYVVT-DIAKDGTL--QGPNLELLKNVCAATDRPVVASGGVS-----------------S 201 (244)
T ss_dssp CCBHHHH---HHHHHHTTCCCEEEE-EC---------CCCHHHHHHHHHTCSSCEEEESCCC-----------------S
T ss_pred CCCHHHH---HHHHHhCCCCEEEEe-ccCccccc--CCCCHHHHHHHHHhcCCCEEEECCCC-----------------C
Confidence 0033343 333445677655544 3322 112 1258888888888 789998863322 1
Q ss_pred CcccHHHHHHHHHHc---CCcEEEEeeec
Q 027740 147 LRELIPCIARTAIAV---GVDGVFMEVHD 172 (219)
Q Consensus 147 ~~~~~~~~~~aAval---GA~GlvIEkH~ 172 (219)
..-...+.++ ||+|+++=+-+
T Consensus 202 -----~~d~~~~~~~~~~Gadgv~vG~al 225 (244)
T 1vzw_A 202 -----LDDLRAIAGLVPAGVEGAIVGKAL 225 (244)
T ss_dssp -----HHHHHHHHTTGGGTEEEEEECHHH
T ss_pred -----HHHHHHHHhhccCCCceeeeeHHH
Confidence 2334456677 99998886643
No 20
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=96.77 E-value=0.031 Score=49.39 Aligned_cols=149 Identities=22% Similarity=0.258 Sum_probs=94.8
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeC---CCCCC----------
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKK---GQFCA---------- 71 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilst---G~~~t---------- 71 (219)
+.++..+++ ++++.-+-++++-++...+. .+++-=-|.. ..-.++..+++.|.|+++.. |..-|
T Consensus 94 pvI~~l~~~-~vpiSIDT~~~~Va~aAl~aGa~iINdVsg~-~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv 171 (294)
T 2dqw_A 94 PVLEAVLSL-GVPVSVDTRKPEVAEEALKLGAHLLNDVTGL-RDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDV 171 (294)
T ss_dssp HHHHHHHTT-CSCEEEECSCHHHHHHHHHHTCSEEECSSCS-CCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSH
T ss_pred HHHHHHHhC-CCeEEEECCCHHHHHHHHHhCCCEEEECCCC-CChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccH
Confidence 344444444 99999999999998887776 7765433444 66789999999999999955 55444
Q ss_pred ----HHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccch---hHHHHHhcCCCEEEcCCCC-C-----CCCCCCccC
Q 027740 72 ----SSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPR---NLEWMREANCPVVADVTHS-L-----QQPAGKKLD 138 (219)
Q Consensus 72 ----~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~---~i~~lk~~~~pV~~ds~Hs-~-----~~~~~~~~~ 138 (219)
.+.+...++.+.+.|.++| ++..|..|+-. ..-|+. .+..++++++|+.+-.|.- . +.|.
T Consensus 172 ~~ev~~~l~~~i~~a~~~Gi~~I-ilDPG~Gf~kt-~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfig~l~g~p~----- 244 (294)
T 2dqw_A 172 VAEVKAFLEAQARRALSAGVPQV-VLDPGFGFGKL-LEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVED----- 244 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCE-EEECCTTSSCC-HHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTCCS-----
T ss_pred HHHHHHHHHHHHHHHHHCCCCcE-EEcCCCCcccC-HHHHHHHHHHHHHHhcCCCCEEEEeccchhhhhhcCCCc-----
Confidence 4456667778888998855 66777765321 112343 4444444689987733321 0 0010
Q ss_pred CCCccCCCCcccHH-HHHHHHHHcCCcEEEEeee
Q 027740 139 GGGVASGGLRELIP-CIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 139 ~~~~~~~G~~~~~~-~~~~aAvalGA~GlvIEkH 171 (219)
...|.... ..+..|+..||+ ++=.|
T Consensus 245 ------~~~R~~~t~a~~~~a~~~Ga~--IvRvH 270 (294)
T 2dqw_A 245 ------PAQRVHGSVAAHLFAVMKGVR--LLRVH 270 (294)
T ss_dssp ------GGGCHHHHHHHHHHHHHTTCC--EEEES
T ss_pred ------hhhhHHHHHHHHHHHHHcCCc--EEEcC
Confidence 01233322 334467888998 99999
No 21
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.76 E-value=0.028 Score=46.11 Aligned_cols=139 Identities=15% Similarity=0.117 Sum_probs=86.2
Q ss_pred HHHHHHHHHHhcCCCeEeee------------CCcccHHHHhhh-ccccccCCCCCCC-----HHHHHHHHhc--CCeEE
Q 027740 4 GLKILEKVKIAYDIPIVTDV------------HETVQCEEVGKV-ADIIQIPAFLCRQ-----TDLLVAAAKT--GKIIN 63 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~------------~d~~~~~~l~~~-vd~~kI~S~~~~n-----~~LL~~~a~~--gkPVi 63 (219)
+.+.+++.++..+++++... -+.++++.+.+. +|++-+++....+ .++++++.+. +++++
T Consensus 44 ~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~ 123 (223)
T 1y0e_A 44 TKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIM 123 (223)
T ss_dssp SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEE
Confidence 35667778888889986321 112456666666 8888888776544 4888888888 99998
Q ss_pred EeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC---CCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCC
Q 027740 64 IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM---FGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDG 139 (219)
Q Consensus 64 lstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~---~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~ 139 (219)
++. . |++|...+ ...|..-+.+.+.+.. ++......++..+..+++ .++||+.+.--+
T Consensus 124 ~~~--~-t~~e~~~~----~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~----------- 185 (223)
T 1y0e_A 124 ADI--A-TVEEAKNA----ARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVI----------- 185 (223)
T ss_dssp EEC--S-SHHHHHHH----HHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCC-----------
T ss_pred ecC--C-CHHHHHHH----HHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCC-----------
Confidence 854 3 78886653 4567654433232211 111001235566777777 789998853221
Q ss_pred CCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 140 GGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 140 ~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
. ..-...+.++||+|+++=+-
T Consensus 186 ---------~--~~~~~~~~~~Gad~v~vG~a 206 (223)
T 1y0e_A 186 ---------T--PDMYKRVMDLGVHCSVVGGA 206 (223)
T ss_dssp ---------S--HHHHHHHHHTTCSEEEECHH
T ss_pred ---------C--HHHHHHHHHcCCCEEEEChH
Confidence 1 34455677889999887543
No 22
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=96.74 E-value=0.022 Score=51.55 Aligned_cols=116 Identities=14% Similarity=-0.018 Sum_probs=76.4
Q ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-C--C-------------CCCccchhHHHHHh-c--C
Q 027740 58 TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG-Y--N-------------DLIVDPRNLEWMRE-A--N 118 (219)
Q Consensus 58 ~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~-~--~-------------~~~~nl~~i~~lk~-~--~ 118 (219)
+++||++|-....+.+++...++.+.+.|..-|++.-++...+ . + .....++.+..+++ . +
T Consensus 219 ~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ 298 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGR 298 (367)
T ss_dssp GCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTC
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCC
Confidence 6899999999888888999999999999987666554432110 0 0 01123566777777 6 7
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHH
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELV 198 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir 198 (219)
+||+.+.. .+. ..-+..++.+||++++|=+-+-. + .|.-++++.+.++
T Consensus 299 ipvI~~GG--------------------I~s--~~da~~~l~~GAd~V~vgra~l~-----~-----gP~~~~~i~~~l~ 346 (367)
T 3zwt_A 299 VPIIGVGG--------------------VSS--GQDALEKIRAGASLVQLYTALTF-----W-----GPPVVGKVKRELE 346 (367)
T ss_dssp SCEEEESS--------------------CCS--HHHHHHHHHHTCSEEEESHHHHH-----H-----CTHHHHHHHHHHH
T ss_pred ceEEEECC--------------------CCC--HHHHHHHHHcCCCEEEECHHHHh-----c-----CcHHHHHHHHHHH
Confidence 99987522 221 34566778899998887554210 1 3566777777776
Q ss_pred HHHHHhC
Q 027740 199 AIAKVSK 205 (219)
Q Consensus 199 ~i~~~lg 205 (219)
..-...|
T Consensus 347 ~~m~~~G 353 (367)
T 3zwt_A 347 ALLKEQG 353 (367)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 6544444
No 23
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.71 E-value=0.0047 Score=51.49 Aligned_cols=142 Identities=12% Similarity=0.112 Sum_probs=88.2
Q ss_pred HHHHHHHHhcCCCeEe--eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhc-CCeE--EEeC------------C
Q 027740 6 KILEKVKIAYDIPIVT--DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKT-GKII--NIKK------------G 67 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~t--t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~-gkPV--ilst------------G 67 (219)
..+++.++..++|+.. -+.++++++.+.+. +|.+-+++..+.|.+++.++.+. |.-+ -++. |
T Consensus 64 ~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g 143 (244)
T 2y88_A 64 ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRG 143 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGG
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECC
Confidence 6788889999999987 46677888888888 99999999999998777665542 2212 2221 1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 68 QFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 68 ~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
..-+.++..+.++.+...|...+.+..+.....+. -.|+..+..+++ .++||+.+..-+ .
T Consensus 144 ~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~--g~~~~~~~~l~~~~~ipvia~GGI~-----------------~ 204 (244)
T 2y88_A 144 WETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLG--GPNLDLLAGVADRTDAPVIASGGVS-----------------S 204 (244)
T ss_dssp GTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTS--CCCHHHHHHHHTTCSSCEEEESCCC-----------------S
T ss_pred ccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccC--CCCHHHHHHHHHhCCCCEEEECCCC-----------------C
Confidence 00000012233344455677655444332222222 257888888887 789999864322 1
Q ss_pred CcccHHHHHHHHHHc---CCcEEEEeee
Q 027740 147 LRELIPCIARTAIAV---GVDGVFMEVH 171 (219)
Q Consensus 147 ~~~~~~~~~~aAval---GA~GlvIEkH 171 (219)
..-...+.+. ||+|+++=+-
T Consensus 205 -----~~d~~~~~~~~~~Gad~v~vG~a 227 (244)
T 2y88_A 205 -----LDDLRAIATLTHRGVEGAIVGKA 227 (244)
T ss_dssp -----HHHHHHHHTTGGGTEEEEEECHH
T ss_pred -----HHHHHHHHhhccCCCCEEEEcHH
Confidence 2334455666 9999988654
No 24
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.68 E-value=0.0091 Score=49.26 Aligned_cols=143 Identities=18% Similarity=0.175 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhcCCCeEe--eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHh-cCCe-E-------------EEe
Q 027740 4 GLKILEKVKIAYDIPIVT--DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAK-TGKI-I-------------NIK 65 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t--t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~-~gkP-V-------------ils 65 (219)
.+..+++.+++.+++++. .+.++++++.+.+. +|.+-|++..+.+..++..+.+ .+.+ + .++
T Consensus 65 ~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~ 144 (253)
T 1h5y_A 65 FIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVY 144 (253)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEE
T ss_pred cHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEE
Confidence 467788899999999886 46777888877777 9999999988887776665544 3421 1 222
Q ss_pred CCCC-----CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCC
Q 027740 66 KGQF-----CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDG 139 (219)
Q Consensus 66 tG~~-----~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~ 139 (219)
.... .+..|+ ++.+.+.|.. .++++....-+.. ...++..+..+++ .++||+.+.
T Consensus 145 ~~~~~~~~~~~~~e~---~~~~~~~G~d-~i~~~~~~~~g~~-~~~~~~~i~~l~~~~~~pvia~G-------------- 205 (253)
T 1h5y_A 145 VKGGREATGLDAVKW---AKEVEELGAG-EILLTSIDRDGTG-LGYDVELIRRVADSVRIPVIASG-------------- 205 (253)
T ss_dssp ETTTTEEEEEEHHHH---HHHHHHHTCS-EEEEEETTTTTTC-SCCCHHHHHHHHHHCSSCEEEES--------------
T ss_pred EeCCeecCCCCHHHH---HHHHHhCCCC-EEEEecccCCCCc-CcCCHHHHHHHHHhcCCCEEEeC--------------
Confidence 2111 134443 3344556765 4455543321111 2247788888887 789998852
Q ss_pred CCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 140 GGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 140 ~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
|.... ..+ ..+...||+|+++=+.+.
T Consensus 206 ------Gi~~~-~~~-~~~~~~Ga~~v~vgsal~ 231 (253)
T 1h5y_A 206 ------GAGRV-EHF-YEAAAAGADAVLAASLFH 231 (253)
T ss_dssp ------CCCSH-HHH-HHHHHTTCSEEEESHHHH
T ss_pred ------CCCCH-HHH-HHHHHcCCcHHHHHHHHH
Confidence 22110 222 334578999999887653
No 25
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.65 E-value=0.05 Score=44.41 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=87.3
Q ss_pred HHHHHHHHHHhcCCCeEe---eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVT---DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t---t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~ 79 (219)
.++.+++.+++++++++. ++.++++++.+.+. +|++-+++ .+.++++.+-+.|.++++. .. |++|+..+.
T Consensus 45 ~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~---~~~~~~~~~~~~g~~~~~g--~~-t~~e~~~a~ 118 (212)
T 2v82_A 45 WEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN---IHSEVIRRAVGYGMTVCPG--CA-TATEAFTAL 118 (212)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS---CCHHHHHHHHHTTCEEECE--EC-SHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC---CCHHHHHHHHHcCCCEEee--cC-CHHHHHHHH
Confidence 356788888889987664 56778888888888 88887666 4678888888899998876 34 899876653
Q ss_pred HHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cC--CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHH
Q 027740 80 EKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN--CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIAR 156 (219)
Q Consensus 80 e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~--~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 156 (219)
..|.. ++++ |+.+ ...+..+..+++ +. +||..+. |.. ..-..
T Consensus 119 ----~~G~d-~v~v-----~~t~--~~g~~~~~~l~~~~~~~ipvia~G--------------------GI~---~~~i~ 163 (212)
T 2v82_A 119 ----EAGAQ-ALKI-----FPSS--AFGPQYIKALKAVLPSDIAVFAVG--------------------GVT---PENLA 163 (212)
T ss_dssp ----HTTCS-EEEE-----TTHH--HHCHHHHHHHHTTSCTTCEEEEES--------------------SCC---TTTHH
T ss_pred ----HCCCC-EEEE-----ecCC--CCCHHHHHHHHHhccCCCeEEEeC--------------------CCC---HHHHH
Confidence 35664 4443 2221 235667777776 54 8887641 211 01123
Q ss_pred HHHHcCCcEEEEeeecCC
Q 027740 157 TAIAVGVDGVFMEVHDDP 174 (219)
Q Consensus 157 aAvalGA~GlvIEkH~t~ 174 (219)
...+.||+|+++=+-+..
T Consensus 164 ~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 164 QWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp HHHHHTCSEEEECTTTCC
T ss_pred HHHHcCCCEEEEChHHhC
Confidence 456689999988666543
No 26
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.64 E-value=0.074 Score=44.93 Aligned_cols=141 Identities=16% Similarity=0.134 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhcCCCeEe---e------eC---CcccHHHHhhh-ccccccCCCCC----CCHHHHHHHHhcCCeEEEeC
Q 027740 4 GLKILEKVKIAYDIPIVT---D------VH---ETVQCEEVGKV-ADIIQIPAFLC----RQTDLLVAAAKTGKIINIKK 66 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t---t------~~---d~~~~~~l~~~-vd~~kI~S~~~----~n~~LL~~~a~~gkPVilst 66 (219)
++..+++.++..++|++- . +| +.++++.+.+. +|++-+.+... +-.++++.+.+.|++++.+.
T Consensus 57 ~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (232)
T 3igs_A 57 GIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADC 136 (232)
T ss_dssp SHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 467888999999999873 1 11 22367777777 99887766543 23578888888899999875
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 67 GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 67 G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
. |.+|.+.+. +.|..-|..-.+|..-.......|+..+..+++.++||+..+.=+ .
T Consensus 137 ~---t~eea~~a~----~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~-----------------t 192 (232)
T 3igs_A 137 S---SVDDGLACQ----RLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYN-----------------S 192 (232)
T ss_dssp C---SHHHHHHHH----HTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCC-----------------S
T ss_pred C---CHHHHHHHH----hCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCC-----------------C
Confidence 3 888877664 457654432223211000112357777777766689998742211 1
Q ss_pred CcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 147 LRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 147 ~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+.-...+.++||+|+++=+-++
T Consensus 193 -----~~d~~~~~~~GadgV~VGsal~ 214 (232)
T 3igs_A 193 -----PALAAEAIRYGAWAVTVGSAIT 214 (232)
T ss_dssp -----HHHHHHHHHTTCSEEEECHHHH
T ss_pred -----HHHHHHHHHcCCCEEEEehHhc
Confidence 3345577888999999977655
No 27
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.54 E-value=0.078 Score=44.74 Aligned_cols=141 Identities=19% Similarity=0.189 Sum_probs=90.2
Q ss_pred HHHHHHHHHHhcCCCeEe---e------eC---CcccHHHHhhh-ccccccCCCCC----CCHHHHHHHHhcCCeEEEeC
Q 027740 4 GLKILEKVKIAYDIPIVT---D------VH---ETVQCEEVGKV-ADIIQIPAFLC----RQTDLLVAAAKTGKIINIKK 66 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t---t------~~---d~~~~~~l~~~-vd~~kI~S~~~----~n~~LL~~~a~~gkPVilst 66 (219)
++..+++.++..++|++. . +| +.++++.+.+. +|++-+.+... +-.++++++.+.|.+++.+.
T Consensus 57 ~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (229)
T 3q58_A 57 GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADC 136 (229)
T ss_dssp SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEec
Confidence 467788888999999872 2 11 12367777777 89887766543 23578888888899999876
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 67 GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 67 G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
. |.+|.+.+. +.|..-|....+|..-.......|+..+..+++.++||+..+.=. .
T Consensus 137 ~---t~eea~~a~----~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~-----------------t 192 (229)
T 3q58_A 137 S---TVNEGISCH----QKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYN-----------------T 192 (229)
T ss_dssp S---SHHHHHHHH----HTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCC-----------------S
T ss_pred C---CHHHHHHHH----hCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCC-----------------C
Confidence 3 888887664 457654432223211000112357777777765589998742211 1
Q ss_pred CcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 147 LRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 147 ~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+.-...+.++||+|+++=+-++
T Consensus 193 -----~~d~~~~~~~GadgV~VGsai~ 214 (229)
T 3q58_A 193 -----PALAANAIEHGAWAVTVGSAIT 214 (229)
T ss_dssp -----HHHHHHHHHTTCSEEEECHHHH
T ss_pred -----HHHHHHHHHcCCCEEEEchHhc
Confidence 3445677888999999876654
No 28
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=96.44 E-value=0.0093 Score=49.91 Aligned_cols=155 Identities=17% Similarity=0.159 Sum_probs=95.5
Q ss_pred HHHHHHHHHhcCCCeEe--eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhc-C---CeEEEeC----C------
Q 027740 5 LKILEKVKIAYDIPIVT--DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKT-G---KIINIKK----G------ 67 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t--t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~-g---kPVilst----G------ 67 (219)
+..+++.+++.++|++. -+.++++++.+.+. +|.+-+|+..+.+.++++++.+. + ..+.++. |
T Consensus 64 ~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~ 143 (252)
T 1ka9_F 64 LDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHV 143 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEE
Confidence 56788999999999987 56667888888777 99999999999988777666543 3 2344443 1
Q ss_pred --C----CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCC
Q 027740 68 --Q----FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGG 140 (219)
Q Consensus 68 --~----~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~ 140 (219)
- ..+..|+. +.+.+.|...+++..+... +.. .-.|+..+..+++ .++||+....-+
T Consensus 144 ~g~~~~~~~~~~e~~---~~~~~~G~~~i~~~~~~~~-g~~-~g~~~~~i~~l~~~~~ipvia~GGI~------------ 206 (252)
T 1ka9_F 144 AGGRVPTGLHAVEWA---VKGVELGAGEILLTSMDRD-GTK-EGYDLRLTRMVAEAVGVPVIASGGAG------------ 206 (252)
T ss_dssp TTTTEEEEEEHHHHH---HHHHHHTCCEEEEEETTTT-TTC-SCCCHHHHHHHHHHCSSCEEEESCCC------------
T ss_pred CCCccccCCcHHHHH---HHHHHcCCCEEEEecccCC-CCc-CCCCHHHHHHHHHHcCCCEEEeCCCC------------
Confidence 0 00223332 2233457765655433221 111 2257888888888 899998742221
Q ss_pred CccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHH
Q 027740 141 GVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELL 194 (219)
Q Consensus 141 ~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv 194 (219)
. ..-.......||+|+++=+-+. ...+++.++.+.+
T Consensus 207 --------~--~~d~~~~~~~Gadgv~vgsal~--------~~~~~~~~~~~~l 242 (252)
T 1ka9_F 207 --------R--MEHFLEAFQAGAEAALAASVFH--------FGEIPIPKLKRYL 242 (252)
T ss_dssp --------S--HHHHHHHHHTTCSEEEESHHHH--------TTSSCHHHHHHHH
T ss_pred --------C--HHHHHHHHHCCCHHHHHHHHHH--------cCCCCHHHHHHHH
Confidence 1 1223344578999998866432 2334566665554
No 29
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=96.41 E-value=0.054 Score=48.44 Aligned_cols=139 Identities=14% Similarity=0.095 Sum_probs=85.7
Q ss_pred HHHHHHHHHHhcCCCeEeeeC-----CcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVH-----ETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~-----d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
..+.|...|+++|+++.+-.+ -.+.++.+.+. +|++.+..... ..++++++-+.|+||+.+.. |+++...
T Consensus 85 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~-~~~~i~~~~~~g~~v~~~v~---t~~~a~~ 160 (369)
T 3bw2_A 85 YAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVP-DREVIARLRRAGTLTLVTAT---TPEEARA 160 (369)
T ss_dssp HHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCC-CHHHHHHHHHTTCEEEEEES---SHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCC-cHHHHHHHHHCCCeEEEECC---CHHHHHH
Confidence 345677788888888754222 13456666666 88888865543 46788888888999998753 7877654
Q ss_pred HHHHHHHcCCCcEEEEee-------cCCCCC-CCCC--cc-chhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCC
Q 027740 78 SAEKVRLAGNPNVMVCER-------GTMFGY-NDLI--VD-PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASG 145 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~c-------gs~~~~-~~~~--~n-l~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~ 145 (219)
+ ...|.. .++++. ++..+. .... .+ +..+..+++ .++||+.+.
T Consensus 161 a----~~~GaD-~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaG-------------------- 215 (369)
T 3bw2_A 161 V----EAAGAD-AVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAG-------------------- 215 (369)
T ss_dssp H----HHTTCS-EEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEES--------------------
T ss_pred H----HHcCCC-EEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEEC--------------------
Confidence 4 345764 555532 221000 0000 23 566777776 789998742
Q ss_pred CCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 146 GLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 146 G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
|... ..-...++++||+|+++=+-|.
T Consensus 216 GI~~--~~~~~~~l~~GAd~V~vGs~~~ 241 (369)
T 3bw2_A 216 GIMR--GGQIAAVLAAGADAAQLGTAFL 241 (369)
T ss_dssp SCCS--HHHHHHHHHTTCSEEEESHHHH
T ss_pred CCCC--HHHHHHHHHcCCCEEEEChHHh
Confidence 2211 3445677889999988765443
No 30
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=96.34 E-value=0.081 Score=47.18 Aligned_cols=166 Identities=20% Similarity=0.195 Sum_probs=99.0
Q ss_pred HHHHHHHHhc-CCCeEeeeCCcccHHHHhhh-cccc-ccCCCCCCCHHHHHHHHhcCCeEEEeC--CC-CCCH-------
Q 027740 6 KILEKVKIAY-DIPIVTDVHETVQCEEVGKV-ADII-QIPAFLCRQTDLLVAAAKTGKIINIKK--GQ-FCAS------- 72 (219)
Q Consensus 6 ~~L~~~~~~~-Gi~~~tt~~d~~~~~~l~~~-vd~~-kI~S~~~~n~~LL~~~a~~gkPVilst--G~-~~t~------- 72 (219)
+.++...++. ++++.-+-++++-++...+. .+++ -|.+.. .-.++..+++.|.|+++.. |. .-|+
T Consensus 106 pvI~~l~~~~~~vpISIDT~~~~VaeaAl~aGa~iINDVsg~~--d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~ 183 (318)
T 2vp8_A 106 PFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGGV--DPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYG 183 (318)
T ss_dssp HHHHHHHHHSTTCEEEEECSCHHHHHHHHHHTCCEEEETTSSS--STTHHHHHHHHTCEEEEECC-------------CC
T ss_pred HHHHHHHhhCCCCeEEEeCCCHHHHHHHHHhCCCEEEECCCCC--chHHHHHHHHhCCCEEEECCCCCCccccccccccc
Confidence 4456666676 99999999999988887776 6654 344443 4578999999999999965 44 2121
Q ss_pred -----------HHHHHHHHHHHHcCCC-cEEEEeecCCCCCCCCCccc---hhHHHHHhcCCCEEEcCCCC------CCC
Q 027740 73 -----------SVMVNSAEKVRLAGNP-NVMVCERGTMFGYNDLIVDP---RNLEWMREANCPVVADVTHS------LQQ 131 (219)
Q Consensus 73 -----------~ei~~A~e~i~~~Gn~-~i~L~~cgs~~~~~~~~~nl---~~i~~lk~~~~pV~~ds~Hs------~~~ 131 (219)
+++.+.++.+.+.|.+ +=+++..|.-|.-. .+-|+ +.+..++++++|+.+-.|.- .+.
T Consensus 184 ~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt-~~~nl~ll~~l~~l~~lg~PvL~G~SrKsfig~~~g~ 262 (318)
T 2vp8_A 184 TTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKN-TFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGV 262 (318)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTT-SHHHHHHHHTHHHHHTTSSCBEECCC-----------
T ss_pred cccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccC-HHHHHHHHHHHHHHHhCCCCEEEEeCcchhhhhhcCC
Confidence 4445556777888976 23577888766322 22244 44444555789987744311 000
Q ss_pred CCCCccCCCCccCCCCcccHHH--HHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 027740 132 PAGKKLDGGGVASGGLRELIPC--IARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKG 206 (219)
Q Consensus 132 ~~~~~~~~~~~~~~G~~~~~~~--~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~ 206 (219)
| ...| .... .+..|+..||+ ++=.| +.+++++.++-.+.+.+.
T Consensus 263 ~------------~~~r-~~~t~a~~~~a~~~Ga~--IvRvH-----------------DV~e~~~a~~~~~al~~~ 307 (318)
T 2vp8_A 263 D------------LTER-LEGTLAATALAAAAGAR--MFRVH-----------------EVAATRRVLEMVASIQGV 307 (318)
T ss_dssp ----------------C-HHHHHHHHHHHHHTTCC--EEEES-----------------CHHHHHHHHHHHHHHTTS
T ss_pred C------------hHHh-HHHHHHHHHHHHHCCCe--EEEcC-----------------CHHHHHHHHHHHHHHhcc
Confidence 0 0112 1122 23455778998 99999 355566666555555444
No 31
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=96.33 E-value=0.097 Score=46.18 Aligned_cols=119 Identities=15% Similarity=0.146 Sum_probs=79.8
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeC--CCCCC--------HH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA--------SS 73 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilst--G~~~t--------~~ 73 (219)
++.++...++.++++.-+-++++-++...+. .+++-=-+..-..-.++..+++.|.||++.. |+. . .+
T Consensus 104 vpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p-~y~d~v~ev~~ 182 (297)
T 1tx2_A 104 VPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM-NYRNLMADMIA 182 (297)
T ss_dssp HHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCC-CCSSHHHHHHH
T ss_pred HHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCC-CcchHHHHHHH
Confidence 3445666667799999999999999987777 7766433333234578899999999999965 543 3 35
Q ss_pred HHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHH---HHhcCCCEEEcCC
Q 027740 74 VMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEW---MREANCPVVADVT 126 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~---lk~~~~pV~~ds~ 126 (219)
.+...++.+.+.|.+ +| ++..|..|+.. ..-|+..|.. ++++++|+.+-.|
T Consensus 183 ~l~~~i~~a~~~GI~~~~I-ilDPg~Gfgk~-~~~n~~ll~~l~~l~~lg~Pvl~G~S 238 (297)
T 1tx2_A 183 DLYDSIKIAKDAGVRDENI-ILDPGIGFAKT-PEQNLEAMRNLEQLNVLGYPVLLGTS 238 (297)
T ss_dssp HHHHHHHHHHHTTCCGGGE-EEECCTTSSCC-HHHHHHHHHTGGGGGGGCSCBEEECT
T ss_pred HHHHHHHHHHHcCCChhcE-EEeCCCCcCCC-HHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 566677778888976 55 66778766332 1224433333 3446899877444
No 32
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.33 E-value=0.016 Score=48.39 Aligned_cols=142 Identities=19% Similarity=0.190 Sum_probs=88.9
Q ss_pred HHHHHHHHHHhcCCCeEe--eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHh-cCC---eEEEeCCC--------
Q 027740 4 GLKILEKVKIAYDIPIVT--DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAK-TGK---IINIKKGQ-------- 68 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t--t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~-~gk---PVilstG~-------- 68 (219)
.++.+++.+++.++|++. -+.++++++.+.+. +|.+-+|+..+.|..++..+.+ .|. -+.++...
T Consensus 62 ~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~ 141 (253)
T 1thf_D 62 MLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVF 141 (253)
T ss_dssp HHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEE
T ss_pred cHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEE
Confidence 467788899999999998 46677888888777 9999999999998776655543 332 23443310
Q ss_pred ---C-----CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCC
Q 027740 69 ---F-----CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDG 139 (219)
Q Consensus 69 ---~-----~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~ 139 (219)
. .+..|+. +.+...|...+ +++....-+.. .-.|+..+..+++ .++||+.+..-+
T Consensus 142 ~~g~~~~~~~~~~e~~---~~~~~~G~~~i-~~~~~~~~g~~-~g~~~~~~~~l~~~~~ipvia~GGI~----------- 205 (253)
T 1thf_D 142 TYSGKKNTGILLRDWV---VEVEKRGAGEI-LLTSIDRDGTK-SGYDTEMIRFVRPLTTLPIIASGGAG----------- 205 (253)
T ss_dssp ETTTTEEEEEEHHHHH---HHHHHTTCSEE-EEEETTTTTSC-SCCCHHHHHHHGGGCCSCEEEESCCC-----------
T ss_pred ECCCccccCCCHHHHH---HHHHHCCCCEE-EEEeccCCCCC-CCCCHHHHHHHHHhcCCCEEEECCCC-----------
Confidence 0 0233332 33344676545 44543321111 2257888888887 789998853322
Q ss_pred CCccCCCCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 140 GGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 140 ~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
. ..-...+...||+|+++=+-+
T Consensus 206 ---------~--~~d~~~~~~~Gadgv~vGsal 227 (253)
T 1thf_D 206 ---------K--MEHFLEAFLAGADAALAASVF 227 (253)
T ss_dssp ---------S--HHHHHHHHHTTCSEEEESHHH
T ss_pred ---------C--HHHHHHHHHcCChHHHHHHHH
Confidence 1 222334457999999886643
No 33
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.30 E-value=0.15 Score=44.25 Aligned_cols=135 Identities=19% Similarity=0.207 Sum_probs=93.4
Q ss_pred HHHHHHHHHhcCCCeEee--eCCcccHHHHhhh-ccccccCCCCCCCH---HHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTD--VHETVQCEEVGKV-ADIIQIPAFLCRQT---DLLVAAAKTGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt--~~d~~~~~~l~~~-vd~~kI~S~~~~n~---~LL~~~a~~gkPVilstG~~~t~~ei~~A 78 (219)
+..|++.++..++|++.- ..|+.+++..... +|.+-++...+.+. .|++.+.+.|+.++++.. |.+|+..|
T Consensus 102 ~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev~---t~ee~~~A 178 (272)
T 3qja_A 102 LDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVH---TEQEADRA 178 (272)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEcC---CHHHHHHH
Confidence 788899999999999873 3456678888777 99998877777643 456677778999998873 89998887
Q ss_pred HHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHH
Q 027740 79 AEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIA 155 (219)
Q Consensus 79 ~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~ 155 (219)
.+ .|..-|.+-.+. .....+|+..+..+.+ . ++||+.- + |... +.-.
T Consensus 179 ~~----~Gad~IGv~~r~----l~~~~~dl~~~~~l~~~v~~~~pvVae-g-------------------GI~t--~edv 228 (272)
T 3qja_A 179 LK----AGAKVIGVNARD----LMTLDVDRDCFARIAPGLPSSVIRIAE-S-------------------GVRG--TADL 228 (272)
T ss_dssp HH----HTCSEEEEESBC----TTTCCBCTTHHHHHGGGSCTTSEEEEE-S-------------------CCCS--HHHH
T ss_pred HH----CCCCEEEECCCc----ccccccCHHHHHHHHHhCcccCEEEEE-C-------------------CCCC--HHHH
Confidence 64 366544333221 1123467888888876 4 6888762 1 2211 3345
Q ss_pred HHHHHcCCcEEEEeeec
Q 027740 156 RTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 156 ~aAvalGA~GlvIEkH~ 172 (219)
.....+||+|++|=+.+
T Consensus 229 ~~l~~~GadgvlVGsal 245 (272)
T 3qja_A 229 LAYAGAGADAVLVGEGL 245 (272)
T ss_dssp HHHHHTTCSEEEECHHH
T ss_pred HHHHHcCCCEEEEcHHH
Confidence 57788999999997764
No 34
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=96.25 E-value=0.061 Score=45.27 Aligned_cols=141 Identities=16% Similarity=0.107 Sum_probs=85.0
Q ss_pred HHHHHHHHHhcCCCeEee--eCCcccHHHHhhh-ccccccCCCCC-C--CHHHHHHHHhc-C---CeEEEeCCC------
Q 027740 5 LKILEKVKIAYDIPIVTD--VHETVQCEEVGKV-ADIIQIPAFLC-R--QTDLLVAAAKT-G---KIINIKKGQ------ 68 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt--~~d~~~~~~l~~~-vd~~kI~S~~~-~--n~~LL~~~a~~-g---kPVilstG~------ 68 (219)
+..+++.+++.++|++.. +.++++++.+.+. +|.+-+|+..+ . +.+.++.+.+. + ..++++-..
T Consensus 63 ~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~ 142 (266)
T 2w6r_A 63 TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGE 142 (266)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTE
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCC
Confidence 678889999999999974 4566778887777 99999999999 4 77777776443 3 233322221
Q ss_pred -------C-----CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCC
Q 027740 69 -------F-----CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGK 135 (219)
Q Consensus 69 -------~-----~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~ 135 (219)
. .+..|+... +...|...| +++..+.-+.. .-+|+..+..+++ .++||+...
T Consensus 143 ~~v~~~g~~~~~~~~~~e~~~~---~~~~G~~~i-~~t~~~~~g~~-~g~~~~~i~~l~~~~~ipvia~G---------- 207 (266)
T 2w6r_A 143 FMVFTHSGKKNTGILLRDWVVE---VEKRGAGEI-LLTSIDRDGTK-SGYDTEMIRFVRPLTTLPIIASG---------- 207 (266)
T ss_dssp EEEEETTTTEEEEEEHHHHHHH---HHHTTCSEE-EEEETTTTTTC-SCCCHHHHHHHGGGCCSCEEEES----------
T ss_pred EEEEECCCceecchhHHHHHHH---HHHcCCCEE-EEEeecCCCCc-CCCCHHHHHHHHHHcCCCEEEeC----------
Confidence 0 134555333 334676555 44544332211 2257888888888 799998732
Q ss_pred ccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 136 KLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 136 ~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
|.+. ..-...+...||+|+++=+-+
T Consensus 208 ----------GI~~--~ed~~~~~~~Gadgv~vgsal 232 (266)
T 2w6r_A 208 ----------GAGK--MEHFLEAFLAGADAALAASVF 232 (266)
T ss_dssp ----------CCCS--HHHHHHHHHHTCSEEEESTTT
T ss_pred ----------CCCC--HHHHHHHHHcCCHHHHccHHH
Confidence 2221 222333446899999886643
No 35
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=96.16 E-value=0.26 Score=39.63 Aligned_cols=149 Identities=19% Similarity=0.164 Sum_probs=88.7
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
++.+.+.++.+|++++.. ++++.+.+. +|.+.+++.+.. ...++.+. .++.+.++. . |.+|+..+ .
T Consensus 59 ~~~l~~~~~~~~v~v~v~----~~~~~a~~~gad~v~l~~~~~~-~~~~~~~~-~~~~~~v~~--~-t~~e~~~~----~ 125 (215)
T 1xi3_A 59 GKTLRQLTREYDALFFVD----DRVDVALAVDADGVQLGPEDMP-IEVAKEIA-PNLIIGASV--Y-SLEEALEA----E 125 (215)
T ss_dssp HHHHHHHHHHTTCEEEEE----SCHHHHHHHTCSEEEECTTSCC-HHHHHHHC-TTSEEEEEE--S-SHHHHHHH----H
T ss_pred HHHHHHHHHHcCCeEEEc----ChHHHHHHcCCCEEEECCccCC-HHHHHHhC-CCCEEEEec--C-CHHHHHHH----H
Confidence 345667777889988874 677888887 999999977654 33445443 456666665 3 78886544 2
Q ss_pred HcCCCcEEEEeecC-CC-CCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH
Q 027740 84 LAGNPNVMVCERGT-MF-GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA 160 (219)
Q Consensus 84 ~~Gn~~i~L~~cgs-~~-~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAva 160 (219)
..|.. .+++.... .. .......++..+..+++ +++||.... |... ..+ ..+..
T Consensus 126 ~~g~d-~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~G--------------------GI~~--~nv-~~~~~ 181 (215)
T 1xi3_A 126 KKGAD-YLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAIG--------------------GINK--DNA-REVLK 181 (215)
T ss_dssp HHTCS-EEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEES--------------------SCCT--TTH-HHHHT
T ss_pred hcCCC-EEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEEC--------------------CcCH--HHH-HHHHH
Confidence 34654 55543211 10 00112356777888877 789998741 2110 122 23567
Q ss_pred cCCcEEEEeeecCCCCCCCCCCCCCCh-HHHHHHHHHHHH
Q 027740 161 VGVDGVFMEVHDDPLNAPVDGPTQWPL-RNLEELLEELVA 199 (219)
Q Consensus 161 lGA~GlvIEkH~t~d~a~~D~~~sl~p-~el~~lv~~ir~ 199 (219)
.||+|+++=+-+.-.+ +| +.++++++.++.
T Consensus 182 ~Ga~gv~vgs~i~~~~---------d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 182 TGVDGIAVISAVMGAE---------DVRKATEELRKIVEE 212 (215)
T ss_dssp TTCSEEEESHHHHTSS---------SHHHHHHHHHHHHHH
T ss_pred cCCCEEEEhHHHhCCC---------CHHHHHHHHHHHHhh
Confidence 8999998766543211 35 366777666654
No 36
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.06 E-value=0.045 Score=46.72 Aligned_cols=133 Identities=13% Similarity=0.074 Sum_probs=91.6
Q ss_pred hHHHHHHHHHHhc-CCCeE-eeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHH
Q 027740 3 EGLKILEKVKIAY-DIPIV-TDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 3 ~gl~~L~~~~~~~-Gi~~~-tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~ 79 (219)
.+++.+++.++++ ++.+- -|+.+.++++.+.+. ++++-.|. .+.++++++-+.|.|++- |.+ |++|+..|.
T Consensus 71 ~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~---~~~~vi~~~~~~gi~~ip--Gv~-TptEi~~A~ 144 (232)
T 4e38_A 71 AAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG---FNPNTVRACQEIGIDIVP--GVN-NPSTVEAAL 144 (232)
T ss_dssp THHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS---CCHHHHHHHHHHTCEEEC--EEC-SHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC---CCHHHHHHHHHcCCCEEc--CCC-CHHHHHHHH
Confidence 3567777777776 34333 389999999998888 99987775 578999999999999987 666 999999985
Q ss_pred HHHHHcCCCcEEEEeecCCCCCCCCCc-cchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHH
Q 027740 80 EKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIAR 156 (219)
Q Consensus 80 e~i~~~Gn~~i~L~~cgs~~~~~~~~~-nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 156 (219)
+ .|..-+-+ ||.. .+ .+..|..++. + ++|++- += |.. ..-+.
T Consensus 145 ~----~Gad~vK~------FPa~--~~gG~~~lkal~~p~p~ip~~p--tG------------------GI~---~~n~~ 189 (232)
T 4e38_A 145 E----MGLTTLKF------FPAE--ASGGISMVKSLVGPYGDIRLMP--TG------------------GIT---PSNID 189 (232)
T ss_dssp H----TTCCEEEE------CSTT--TTTHHHHHHHHHTTCTTCEEEE--BS------------------SCC---TTTHH
T ss_pred H----cCCCEEEE------CcCc--cccCHHHHHHHHHHhcCCCeee--Ec------------------CCC---HHHHH
Confidence 4 67765544 4443 23 4567777777 5 678763 21 211 11234
Q ss_pred HHHHcCCcEEEEeeecCCCC
Q 027740 157 TAIAVGVDGVFMEVHDDPLN 176 (219)
Q Consensus 157 aAvalGA~GlvIEkH~t~d~ 176 (219)
...++|+.++++=.-+++..
T Consensus 190 ~~l~aGa~~~vgGs~l~~~~ 209 (232)
T 4e38_A 190 NYLAIPQVLACGGTWMVDKK 209 (232)
T ss_dssp HHHTSTTBCCEEECGGGCHH
T ss_pred HHHHCCCeEEEECchhcChH
Confidence 66788888777766665543
No 37
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=96.01 E-value=0.19 Score=41.08 Aligned_cols=149 Identities=17% Similarity=0.107 Sum_probs=86.3
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCC-eEEEeCCCCCCHHHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGK-IINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gk-PVilstG~~~t~~ei~~A~e~i 82 (219)
.+.+.+.++.+|++++.. +.++.+.+. +|.+.+|..+.. +.+.....+. .+.++. . |++|+..+.
T Consensus 67 ~~~l~~~~~~~~v~v~v~----~~~~~a~~~gad~v~l~~~~~~---~~~~~~~~g~~~~~~s~--~-t~~e~~~a~--- 133 (227)
T 2tps_A 67 AEKAQAACREAGVPFIVN----DDVELALNLKADGIHIGQEDAN---AKEVRAAIGDMILGVSA--H-TMSEVKQAE--- 133 (227)
T ss_dssp HHHHHHHHHHHTCCEEEE----SCHHHHHHHTCSEEEECTTSSC---HHHHHHHHTTSEEEEEE--C-SHHHHHHHH---
T ss_pred HHHHHHHHHHcCCeEEEc----CHHHHHHHcCCCEEEECCCccC---HHHHHHhcCCcEEEEec--C-CHHHHHHHH---
Confidence 445667778889998885 467777777 999999887653 2222222453 444443 3 788865543
Q ss_pred HHcCCCcEEEE---eecCCCCCCCCCccchhHHHHHh-cC-CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHH
Q 027740 83 RLAGNPNVMVC---ERGTMFGYNDLIVDPRNLEWMRE-AN-CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIART 157 (219)
Q Consensus 83 ~~~Gn~~i~L~---~cgs~~~~~~~~~nl~~i~~lk~-~~-~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~a 157 (219)
..|..-+.+. ..++..++ ....++..+..+++ ++ +||.... |... ..+ ..
T Consensus 134 -~~g~d~v~~~~v~~t~~~~~~-~~~~~~~~l~~~~~~~~~~pvia~G--------------------GI~~--~nv-~~ 188 (227)
T 2tps_A 134 -EDGADYVGLGPIYPTETKKDT-RAVQGVSLIEAVRRQGISIPIVGIG--------------------GITI--DNA-AP 188 (227)
T ss_dssp -HHTCSEEEECCSSCCCSSSSC-CCCCTTHHHHHHHHTTCCCCEEEES--------------------SCCT--TTS-HH
T ss_pred -hCCCCEEEECCCcCCCCCCCC-CCccCHHHHHHHHHhCCCCCEEEEc--------------------CCCH--HHH-HH
Confidence 3566544431 22221110 12356777888877 66 9997731 2110 112 23
Q ss_pred HHHcCCcEEEEeeecCCCCCCCCCCCCCCh-HHHHHHHHHHHHH
Q 027740 158 AIAVGVDGVFMEVHDDPLNAPVDGPTQWPL-RNLEELLEELVAI 200 (219)
Q Consensus 158 AvalGA~GlvIEkH~t~d~a~~D~~~sl~p-~el~~lv~~ir~i 200 (219)
+...||+|+.+=+-+.-. -+| +.++++++.++..
T Consensus 189 ~~~~Ga~gv~vgs~i~~~---------~d~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 189 VIQAGADGVSMISAISQA---------EDPESAARKFREEIQTY 223 (227)
T ss_dssp HHHTTCSEEEESHHHHTS---------SCHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEhHHhhcC---------CCHHHHHHHHHHHHHhc
Confidence 456899998886654321 135 6777777766654
No 38
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=95.96 E-value=0.14 Score=45.37 Aligned_cols=120 Identities=16% Similarity=0.228 Sum_probs=75.6
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccc-cCCCCCCCHHHHHHHHhcCCeEEEeC----------------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQ-IPAFLCRQTDLLVAAAKTGKIINIKK---------------- 66 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~k-I~S~~~~n~~LL~~~a~~gkPVilst---------------- 66 (219)
++.++...++.++++.-+-++++-++...+. .+++- |.++. ..-.++.-+++.+.||++-.
T Consensus 74 ~pvI~~l~~~~~vpiSIDT~~~~Va~aAl~aGa~iINDVsg~~-~d~~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~ 152 (314)
T 2vef_A 74 VPVIKAIRKESDVLISIDTWKSQVAEAALAAGADLVNDITGLM-GDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFP 152 (314)
T ss_dssp HHHHHHHHHHCCCEEEEECSCHHHHHHHHHTTCCEEEETTTTC-SCTTHHHHHHHHTCEEEEECCHHHHCTTSTTTTTSC
T ss_pred HHHHHHHHhhCCceEEEeCCCHHHHHHHHHcCCCEEEECCCCC-CChHHHHHHHHcCCCEEEEecCCCCCCCCccccccc
Confidence 3444555667799999999999988887776 77654 44433 23467888899999999962
Q ss_pred ----CCCCC-----------HHH-----HHHHHHHHHHcCCC-cEEEEeecCCCCCCCCCccchhHHHHH---hcCCCEE
Q 027740 67 ----GQFCA-----------SSV-----MVNSAEKVRLAGNP-NVMVCERGTMFGYNDLIVDPRNLEWMR---EANCPVV 122 (219)
Q Consensus 67 ----G~~~t-----------~~e-----i~~A~e~i~~~Gn~-~i~L~~cgs~~~~~~~~~nl~~i~~lk---~~~~pV~ 122 (219)
|+..+ ++| +...++.+.+.|.+ +=+++..|.-|+-.. +-|+..|..++ .+++|+.
T Consensus 153 ~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~kt~-~~nl~ll~~l~~l~~~g~PvL 231 (314)
T 2vef_A 153 HFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTK-KENLLLLRDLDKLHQKGYPIF 231 (314)
T ss_dssp CCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEEECCTTSSCCH-HHHHHHHHTHHHHHTTSSCBE
T ss_pred ccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccch-HHHHHHHHHHHHhhcCCCCEE
Confidence 22222 444 34556677788974 234578887553321 12554444444 3689987
Q ss_pred EcCC
Q 027740 123 ADVT 126 (219)
Q Consensus 123 ~ds~ 126 (219)
+-.|
T Consensus 232 ~G~S 235 (314)
T 2vef_A 232 LGVS 235 (314)
T ss_dssp EECS
T ss_pred EEeC
Confidence 7444
No 39
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.93 E-value=0.02 Score=49.81 Aligned_cols=86 Identities=19% Similarity=0.147 Sum_probs=68.9
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCC----CHHHHHHHHhc---CCeEEEeCCCCCCHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCR----QTDLLVAAAKT---GKIINIKKGQFCASSVM 75 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~----n~~LL~~~a~~---gkPVilstG~~~t~~ei 75 (219)
-++.|.++|+++|+.++.++++++.++...+. +|++.|..++.. +...++.+.+. +.||+..-|.. |.+++
T Consensus 150 ~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~-t~edv 228 (272)
T 3qja_A 150 VLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVR-GTADL 228 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCC-SHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEEECCCC-CHHHH
Confidence 47788899999999999999999999988888 999999987642 45666676653 78999999999 99998
Q ss_pred HHHHHHHHHcCCCcEEEEe
Q 027740 76 VNSAEKVRLAGNPNVMVCE 94 (219)
Q Consensus 76 ~~A~e~i~~~Gn~~i~L~~ 94 (219)
... .+.|..-+++..
T Consensus 229 ~~l----~~~GadgvlVGs 243 (272)
T 3qja_A 229 LAY----AGAGADAVLVGE 243 (272)
T ss_dssp HHH----HHTTCSEEEECH
T ss_pred HHH----HHcCCCEEEEcH
Confidence 754 456776555544
No 40
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.84 E-value=0.041 Score=46.51 Aligned_cols=84 Identities=11% Similarity=0.032 Sum_probs=67.5
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCC--------CCCCHHHHHHHHhcCCeEEEeCCCCCCHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAF--------LCRQTDLLVAAAKTGKIINIKKGQFCASSVM 75 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~--------~~~n~~LL~~~a~~gkPVilstG~~~t~~ei 75 (219)
++.+.+.+++.|+.++.++++.+.+..+.+. +|++-+..+ .-.++++++++.+.+.||+-.-|.. |.+++
T Consensus 118 l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~-t~~d~ 196 (229)
T 3q58_A 118 IDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYN-TPALA 196 (229)
T ss_dssp HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCC-SHHHH
T ss_pred HHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCC-CHHHH
Confidence 5677888899999999999999999988888 998854322 2347899999988799999999999 99998
Q ss_pred HHHHHHHHHcCCCcEEEE
Q 027740 76 VNSAEKVRLAGNPNVMVC 93 (219)
Q Consensus 76 ~~A~e~i~~~Gn~~i~L~ 93 (219)
..+.+ .|..-+++-
T Consensus 197 ~~~~~----~GadgV~VG 210 (229)
T 3q58_A 197 ANAIE----HGAWAVTVG 210 (229)
T ss_dssp HHHHH----TTCSEEEEC
T ss_pred HHHHH----cCCCEEEEc
Confidence 87643 477655553
No 41
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.84 E-value=0.12 Score=45.73 Aligned_cols=138 Identities=16% Similarity=0.119 Sum_probs=93.9
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..|++..++-+..++-++||..+...+++. ++.+.+++.-+.+ ...|.| .++.. |++|+...++.|..
T Consensus 12 ~~lr~l~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~-------~~~G~p---D~~~v-t~~em~~~~~~I~r 80 (298)
T 3eoo_A 12 AKFRAAVAAEQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAA-------NSLGIP---DLGIS-TMDDVLVDANRITN 80 (298)
T ss_dssp HHHHHHHHHSSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHH-------HTTCCC---SSSCC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHH-------HhcCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 356777777778888899999999999888 9999998854432 356777 66766 99999988887754
Q ss_pred cCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 85 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 85 ~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
. .++||++|-+..- |...-+....+.....||.
T Consensus 81 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~v~~~v~~l~~aGaa 113 (298)
T 3eoo_A 81 A-------------------------------TNLPLLVDIDTGW----------------GGAFNIARTIRSFIKAGVG 113 (298)
T ss_dssp H-------------------------------CCSCEEEECTTCS----------------SSHHHHHHHHHHHHHTTCS
T ss_pred h-------------------------------cCCeEEEECCCCC----------------CCHHHHHHHHHHHHHhCCe
Confidence 2 2468888877653 3222233445556789999
Q ss_pred EEEEeeecCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHHh
Q 027740 165 GVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKVS 204 (219)
Q Consensus 165 GlvIEkH~t~d~a~-~D~~~sl~p~el~~lv~~ir~i~~~l 204 (219)
|+-||--..|.|.- .+++.-.+. .++++.|+.+..+.
T Consensus 114 gv~iEDq~~~k~cGh~~gk~l~~~---~e~~~ri~Aa~~A~ 151 (298)
T 3eoo_A 114 AVHLEDQVGQKRCGHRPGKECVPA---GEMVDRIKAAVDAR 151 (298)
T ss_dssp EEEEECBCCCCCTTCCCCCCBCCH---HHHHHHHHHHHHHC
T ss_pred EEEECCCCCCcccCCCCCCeecCH---HHHHHHHHHHHHhc
Confidence 99999876665532 123333344 45566666666665
No 42
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=95.84 E-value=0.043 Score=46.41 Aligned_cols=84 Identities=14% Similarity=0.039 Sum_probs=67.6
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCC--------CCCCHHHHHHHHhcCCeEEEeCCCCCCHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAF--------LCRQTDLLVAAAKTGKIINIKKGQFCASSVM 75 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~--------~~~n~~LL~~~a~~gkPVilstG~~~t~~ei 75 (219)
++.+.+.++++|+.++.++++.+.+..+.+. +|++-+..+ .-.++++++++.+.+.||+-.-|.. |.+++
T Consensus 118 l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~-t~~d~ 196 (232)
T 3igs_A 118 VEALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYN-SPALA 196 (232)
T ss_dssp HHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCC-SHHHH
T ss_pred HHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCC-CHHHH
Confidence 5678888899999999999999999988888 998854222 2347899999988799999999998 99998
Q ss_pred HHHHHHHHHcCCCcEEEE
Q 027740 76 VNSAEKVRLAGNPNVMVC 93 (219)
Q Consensus 76 ~~A~e~i~~~Gn~~i~L~ 93 (219)
..+.+ .|..-+++-
T Consensus 197 ~~~~~----~GadgV~VG 210 (232)
T 3igs_A 197 AEAIR----YGAWAVTVG 210 (232)
T ss_dssp HHHHH----TTCSEEEEC
T ss_pred HHHHH----cCCCEEEEe
Confidence 87643 477655554
No 43
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=95.73 E-value=0.35 Score=41.90 Aligned_cols=149 Identities=17% Similarity=0.124 Sum_probs=91.6
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh---ccccc-cCCCCCCC-HHHHHHHHhcCCeEEEe----CCCCCC----H
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV---ADIIQ-IPAFLCRQ-TDLLVAAAKTGKIINIK----KGQFCA----S 72 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~---vd~~k-I~S~~~~n-~~LL~~~a~~gkPVils----tG~~~t----~ 72 (219)
+.++.+.+..++++.-+-++++-++...+. .+++- |.... .+ ..++..+++.|.||++. +|+..| +
T Consensus 68 ~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~~~-d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~ 146 (271)
T 2yci_X 68 WLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSADQ-WKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRS 146 (271)
T ss_dssp HHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCSCCEEEEECSCH-HHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHH
T ss_pred HHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCCCc-cccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHH
Confidence 345555566799999999998888776554 44443 33332 11 45888889999999994 456656 4
Q ss_pred HHHHHHHHHHHHcCCCc-EEEEeecCCC-CCCCCCccc---hhHHHHHhcC---CCEEEcCCCCCCCCCCCccCCCCccC
Q 027740 73 SVMVNSAEKVRLAGNPN-VMVCERGTMF-GYNDLIVDP---RNLEWMREAN---CPVVADVTHSLQQPAGKKLDGGGVAS 144 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~-i~L~~cgs~~-~~~~~~~nl---~~i~~lk~~~---~pV~~ds~Hs~~~~~~~~~~~~~~~~ 144 (219)
+.+.+.++.+.+.|-+. =+++..|..| ++.. +-|+ +.+..+++.+ +|+.+-.|- .+
T Consensus 147 ~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~-~~~~~~l~~l~~~~~~~~p~~p~l~G~Sn---------------ks 210 (271)
T 2yci_X 147 QLAMELVANADAHGIPMTELYIDPLILPVNVAQ-EHAVEVLETIRQIKLMANPAPRTVLGLSN---------------VS 210 (271)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCCCCTTTST-HHHHHHHHHHHHHTTSSSSCCEEEEEGGG---------------GG
T ss_pred HHHHHHHHHHHHCCCCcccEEEecCCCccccCH-HHHHHHHHHHHHHHHhCCCCCCEEEeeCc---------------cc
Confidence 55555666778888653 4578888876 4442 2354 4444444434 898763221 11
Q ss_pred CC--CcccH-HHHHHHHHHcCCcEEEEeee
Q 027740 145 GG--LRELI-PCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 145 ~G--~~~~~-~~~~~aAvalGA~GlvIEkH 171 (219)
.| .|+.+ ...+..|++.|++..++-.|
T Consensus 211 fg~~~r~~l~~t~~~~a~~~g~~~~iv~~~ 240 (271)
T 2yci_X 211 QKCPDRPLINRTYLVMAMTAGLDAAIMDVD 240 (271)
T ss_dssp TTCSSHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred cCCchHHHHHHHHHHHHHHHhCCcEEECCC
Confidence 23 23332 23445678889986666444
No 44
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=95.73 E-value=0.33 Score=42.39 Aligned_cols=114 Identities=12% Similarity=0.047 Sum_probs=72.3
Q ss_pred ccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-C-CC
Q 027740 27 VQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG-Y-ND 103 (219)
Q Consensus 27 ~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~-~-~~ 103 (219)
+.++.+.+. +|++.++..+ ..++++++-+.|.||+.+. . |.++...+ ...|.. .++++. ..++ + ..
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~--p~~~~~~l~~~gi~vi~~v--~-t~~~a~~~----~~~GaD-~i~v~g-~~~GG~~G~ 155 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGND--PGEHIAEFRRHGVKVIHKC--T-AVRHALKA----ERLGVD-AVSIDG-FECAGHPGE 155 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESC--CHHHHHHHHHTTCEEEEEE--S-SHHHHHHH----HHTTCS-EEEEEC-TTCSBCCCS
T ss_pred HHHHHHHhcCCCEEEEcCCC--cHHHHHHHHHcCCCEEeeC--C-CHHHHHHH----HHcCCC-EEEEEC-CCCCcCCCC
Confidence 456666666 8999988664 3678888888899999764 3 77776543 345664 445542 2211 1 11
Q ss_pred -CCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 104 -LIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 104 -~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
...++..++.+++ .++||+.+. |.+. ..-...+.++||+|+++=+-|.
T Consensus 156 ~~~~~~~~l~~v~~~~~iPviaaG--------------------GI~~--~~~v~~al~~GAdgV~vGs~~~ 205 (328)
T 2gjl_A 156 DDIPGLVLLPAAANRLRVPIIASG--------------------GFAD--GRGLVAALALGADAINMGTRFL 205 (328)
T ss_dssp SCCCHHHHHHHHHTTCCSCEEEES--------------------SCCS--HHHHHHHHHHTCSEEEESHHHH
T ss_pred ccccHHHHHHHHHHhcCCCEEEEC--------------------CCCC--HHHHHHHHHcCCCEEEECHHHH
Confidence 1246677777777 789998852 2211 2334566778999998876543
No 45
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=95.67 E-value=0.22 Score=42.47 Aligned_cols=130 Identities=11% Similarity=0.058 Sum_probs=84.2
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
.+.+++.|+++|++++-. ..++...++ +|.+-++..++.... ++.+-..++.|.+|.. |++|+..|.+
T Consensus 85 a~~l~~l~~~~~~~liIn----d~~~lA~~~gAdGVHLg~~dl~~~~-~r~~~~~~~~iG~S~h---t~~Ea~~A~~--- 153 (243)
T 3o63_A 85 CEILADAAHRYGALFAVN----DRADIARAAGADVLHLGQRDLPVNV-ARQILAPDTLIGRSTH---DPDQVAAAAA--- 153 (243)
T ss_dssp HHHHHHHHHHTTCEEEEE----SCHHHHHHHTCSEEEECTTSSCHHH-HHHHSCTTCEEEEEEC---SHHHHHHHHH---
T ss_pred HHHHHHHHHhhCCEEEEe----CHHHHHHHhCCCEEEecCCcCCHHH-HHHhhCCCCEEEEeCC---CHHHHHHHhh---
Confidence 367889999999999885 344556666 888999999886544 4444445788888873 8999887754
Q ss_pred HcCCCcEEEEeecCCCCCCC----CCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHH
Q 027740 84 LAGNPNVMVCERGTMFGYND----LIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIAR 156 (219)
Q Consensus 84 ~~Gn~~i~L~~cgs~~~~~~----~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 156 (219)
.|..-|.+-. .|+++. ..+.+..+.++++ . ++||+.. +|.. ..-..
T Consensus 154 -~GaDyI~vgp---vf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAi--------------------GGI~---~~ni~ 206 (243)
T 3o63_A 154 -GDADYFCVGP---CWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAI--------------------GGIN---AQRLP 206 (243)
T ss_dssp -SSCSEEEECC---SSCCCC-----CCCHHHHHHHHTC---CCCEEEE--------------------SSCC---TTTHH
T ss_pred -CCCCEEEEcC---ccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEe--------------------cCCC---HHHHH
Confidence 5765444422 232221 1356677777765 2 7898763 1211 11234
Q ss_pred HHHHcCCcEEEEeeec
Q 027740 157 TAIAVGVDGVFMEVHD 172 (219)
Q Consensus 157 aAvalGA~GlvIEkH~ 172 (219)
...+.||+|+.+=.-+
T Consensus 207 ~~~~aGa~gvav~sai 222 (243)
T 3o63_A 207 AVLDAGARRIVVVRAI 222 (243)
T ss_dssp HHHHTTCCCEEESHHH
T ss_pred HHHHcCCCEEEEeHHH
Confidence 6678999998876554
No 46
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=95.65 E-value=0.021 Score=47.71 Aligned_cols=140 Identities=15% Similarity=0.076 Sum_probs=88.5
Q ss_pred HHHHHHHHHhcCCCeEe--eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEE--EeCC------------
Q 027740 5 LKILEKVKIAYDIPIVT--DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIIN--IKKG------------ 67 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t--t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVi--lstG------------ 67 (219)
++.+++.+ +.++|++. -+.++++++.+.+. +|.+-+|+..+.|.++++.+.+.+..++ ++..
T Consensus 63 ~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~ 141 (241)
T 1qo2_A 63 LPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSLREIDVEPVFSLDTRGGRVAFKGWLAE 141 (241)
T ss_dssp HHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHHHTTTCEEEEEEEEETTEECCTTCSSC
T ss_pred HHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHHHHcCCcEEEEEEecCCEEEECCceec
Confidence 56677777 78999887 56777788887777 9999999999999888888844443333 4331
Q ss_pred CCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 68 QFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 68 ~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
...+..|+... +.+.|...+++ +..+.-+.. ...|+..+..+++ .++||+....-+ .
T Consensus 142 ~~~~~~e~~~~---~~~~G~~~i~~-t~~~~~g~~-~g~~~~~i~~l~~~~~iPvia~GGI~-----------------~ 199 (241)
T 1qo2_A 142 EEIDPVSLLKR---LKEYGLEEIVH-TEIEKDGTL-QEHDFSLTKKIAIEAEVKVLAAGGIS-----------------S 199 (241)
T ss_dssp SCCCHHHHHHH---HHTTTCCEEEE-EETTHHHHT-CCCCHHHHHHHHHHHTCEEEEESSCC-----------------S
T ss_pred CCCCHHHHHHH---HHhCCCCEEEE-EeecccccC-CcCCHHHHHHHHHhcCCcEEEECCCC-----------------C
Confidence 01145555332 34467765555 443210100 1247888888888 899998742221 1
Q ss_pred CcccHHHHHHHHHHc-----C-CcEEEEeeec
Q 027740 147 LRELIPCIARTAIAV-----G-VDGVFMEVHD 172 (219)
Q Consensus 147 ~~~~~~~~~~aAval-----G-A~GlvIEkH~ 172 (219)
..-....... | |+|+++=+-+
T Consensus 200 -----~~d~~~~~~~~~~~~G~adgv~vgsal 226 (241)
T 1qo2_A 200 -----ENSLKTAQKVHTETNGLLKGVIVGRAF 226 (241)
T ss_dssp -----HHHHHHHHHHHHHTTTSEEEEEECHHH
T ss_pred -----HHHHHHHHhcccccCCeEeEEEeeHHH
Confidence 2333444555 9 9999987653
No 47
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.60 E-value=0.13 Score=44.41 Aligned_cols=168 Identities=11% Similarity=-0.006 Sum_probs=97.1
Q ss_pred HHHHHHHhc--CCCeEeeeCCcc--cHH----HHhhh-cc-ccccCC--C------CC-CCH----HHHHHHHh-cCCeE
Q 027740 7 ILEKVKIAY--DIPIVTDVHETV--QCE----EVGKV-AD-IIQIPA--F------LC-RQT----DLLVAAAK-TGKII 62 (219)
Q Consensus 7 ~L~~~~~~~--Gi~~~tt~~d~~--~~~----~l~~~-vd-~~kI~S--~------~~-~n~----~LL~~~a~-~gkPV 62 (219)
.+.+..+.. +.+++..++... +.. .+.+. +| ++.|.- - .+ .+. ++++++-+ +++||
T Consensus 82 ~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv 161 (311)
T 1jub_A 82 YVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPL 161 (311)
T ss_dssp HHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCE
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCE
Confidence 344433355 788888887432 222 22223 46 555521 1 11 133 45565554 37899
Q ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec-----CC-------------C-CC-CC--CCccchhHHHHHh-c--
Q 027740 63 NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG-----TM-------------F-GY-ND--LIVDPRNLEWMRE-A-- 117 (219)
Q Consensus 63 ilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cg-----s~-------------~-~~-~~--~~~nl~~i~~lk~-~-- 117 (219)
++|.....+.+++...++.+.+.|..-|++.-++ .. + ++ .. ...+++.+..+++ .
T Consensus 162 ~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~ 241 (311)
T 1jub_A 162 GVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKP 241 (311)
T ss_dssp EEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCT
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCC
Confidence 9998877688899988998888897655543332 00 0 00 00 0123566777777 6
Q ss_pred CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHH
Q 027740 118 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEEL 197 (219)
Q Consensus 118 ~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~i 197 (219)
++||+.... .+. ..-+..++++|||+++|=+-+-- -+|.-++++.+.+
T Consensus 242 ~ipvi~~GG--------------------I~~--~~da~~~l~~GAd~V~vg~~~l~----------~~p~~~~~i~~~l 289 (311)
T 1jub_A 242 EIQIIGTGG--------------------IET--GQDAFEHLLCGATMLQIGTALHK----------EGPAIFDRIIKEL 289 (311)
T ss_dssp TSEEEEESS--------------------CCS--HHHHHHHHHHTCSEEEECHHHHH----------HCTHHHHHHHHHH
T ss_pred CCCEEEECC--------------------CCC--HHHHHHHHHcCCCEEEEchHHHh----------cCcHHHHHHHHHH
Confidence 899987422 221 34455667889998887654211 1356777777777
Q ss_pred HHHHHHhCC
Q 027740 198 VAIAKVSKG 206 (219)
Q Consensus 198 r~i~~~lg~ 206 (219)
+..-...|-
T Consensus 290 ~~~l~~~g~ 298 (311)
T 1jub_A 290 EEIMNQKGY 298 (311)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 766555553
No 48
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=95.59 E-value=0.054 Score=43.89 Aligned_cols=128 Identities=16% Similarity=0.170 Sum_probs=75.2
Q ss_pred HHHHHHHHhc--CCCeEe-eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 6 KILEKVKIAY--DIPIVT-DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 6 ~~L~~~~~~~--Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
..+++..+.+ ++.+.. ++.++++++...+. +|++ ++.. .+.++++.+-+.|+|++. |.. |.+|+..|.
T Consensus 50 ~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~--~~~~~~~~~~~~g~~vi~--g~~-t~~e~~~a~-- 121 (205)
T 1wa3_A 50 TVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPH--LDEEISQFCKEKGVFYMP--GVM-TPTELVKAM-- 121 (205)
T ss_dssp HHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSS--CCHHHHHHHHHHTCEEEC--EEC-SHHHHHHHH--
T ss_pred HHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-EcCC--CCHHHHHHHHHcCCcEEC--CcC-CHHHHHHHH--
Confidence 3344444444 344444 66777777776666 7877 5543 236677777778888876 544 788877664
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 027740 82 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 159 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv 159 (219)
+.|.. ++-.+ +. ....+..+..+++ + ++||..+ ||.. ..-.....
T Consensus 122 --~~Gad-~vk~~-----~~--~~~g~~~~~~l~~~~~~~pvia~--------------------GGI~---~~~~~~~~ 168 (205)
T 1wa3_A 122 --KLGHT-ILKLF-----PG--EVVGPQFVKAMKGPFPNVKFVPT--------------------GGVN---LDNVCEWF 168 (205)
T ss_dssp --HTTCC-EEEET-----TH--HHHHHHHHHHHHTTCTTCEEEEB--------------------SSCC---TTTHHHHH
T ss_pred --HcCCC-EEEEc-----Cc--cccCHHHHHHHHHhCCCCcEEEc--------------------CCCC---HHHHHHHH
Confidence 34654 22221 11 1124555666666 6 7898763 1211 11234667
Q ss_pred HcCCcEEEEeeecCC
Q 027740 160 AVGVDGVFMEVHDDP 174 (219)
Q Consensus 160 alGA~GlvIEkH~t~ 174 (219)
.+||+|+.+=+-+..
T Consensus 169 ~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 169 KAGVLAVGVGSALVK 183 (205)
T ss_dssp HHTCSCEEECHHHHC
T ss_pred HCCCCEEEECccccC
Confidence 899999888665543
No 49
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=95.59 E-value=0.26 Score=43.33 Aligned_cols=135 Identities=13% Similarity=0.070 Sum_probs=81.8
Q ss_pred HHHHHHHhcCCCeEeeeCC-----cccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHE-----TVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d-----~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e 80 (219)
++++..+..+.+|..-++- .+.++.+.+. +|++.++...- .++++++-+.+.||+++- . ++++...+
T Consensus 54 ~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~p--~~~i~~l~~~g~~v~~~v--~-~~~~a~~~-- 126 (332)
T 2z6i_A 54 NIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGNP--SKYMERFHEAGIIVIPVV--P-SVALAKRM-- 126 (332)
T ss_dssp HHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSCG--GGTHHHHHHTTCEEEEEE--S-SHHHHHHH--
T ss_pred HHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCCh--HHHHHHHHHcCCeEEEEe--C-CHHHHHHH--
Confidence 3444444456666665554 2345556666 89999987632 456777777899999886 3 67765543
Q ss_pred HHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 027740 81 KVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 159 (219)
Q Consensus 81 ~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv 159 (219)
.+.|.. .++++....-++.....++..++.+++ .++||+... |..+ ..-..+++
T Consensus 127 --~~~GaD-~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaG--------------------GI~~--~~~~~~al 181 (332)
T 2z6i_A 127 --EKIGAD-AVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAG--------------------GIAD--GEGAAAGF 181 (332)
T ss_dssp --HHTTCS-CEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEES--------------------SCCS--HHHHHHHH
T ss_pred --HHcCCC-EEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEEC--------------------CCCC--HHHHHHHH
Confidence 446765 444442211011112346677777877 799998742 2211 23455778
Q ss_pred HcCCcEEEEeeecC
Q 027740 160 AVGVDGVFMEVHDD 173 (219)
Q Consensus 160 alGA~GlvIEkH~t 173 (219)
++||+|+++=+-|-
T Consensus 182 ~~GAdgV~vGs~~l 195 (332)
T 2z6i_A 182 MLGAEAVQVGTRFV 195 (332)
T ss_dssp HTTCSEEEECHHHH
T ss_pred HcCCCEEEecHHHh
Confidence 89999998865543
No 50
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.56 E-value=0.28 Score=43.22 Aligned_cols=135 Identities=15% Similarity=0.080 Sum_probs=82.3
Q ss_pred HHHHHHHhcCCCeEeeeCC-----cccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHE-----TVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d-----~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e 80 (219)
++++..+..+.+|..-.+- .+.++.+.+. +|++.++..+ ..++++.+.+.+.||+.+- . +.++...+.
T Consensus 68 ~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~--p~~~~~~l~~~g~~v~~~v--~-s~~~a~~a~- 141 (326)
T 3bo9_A 68 AISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN--PTKYIRELKENGTKVIPVV--A-SDSLARMVE- 141 (326)
T ss_dssp HHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC--CHHHHHHHHHTTCEEEEEE--S-SHHHHHHHH-
T ss_pred HHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC--cHHHHHHHHHcCCcEEEEc--C-CHHHHHHHH-
Confidence 3444444445566554332 3455556566 8999997775 3778888888899999865 3 777766543
Q ss_pred HHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 027740 81 KVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 159 (219)
Q Consensus 81 ~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv 159 (219)
..|.. .++++....-++.....++..++.+++ .++||+.+. |.+. ..-...+.
T Consensus 142 ---~~GaD-~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaG--------------------GI~~--~~dv~~al 195 (326)
T 3bo9_A 142 ---RAGAD-AVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAG--------------------GIAD--GRGMAAAF 195 (326)
T ss_dssp ---HTTCS-CEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEES--------------------SCCS--HHHHHHHH
T ss_pred ---HcCCC-EEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEEC--------------------CCCC--HHHHHHHH
Confidence 45764 445543111011112246777888777 789998842 2211 23345677
Q ss_pred HcCCcEEEEeeecC
Q 027740 160 AVGVDGVFMEVHDD 173 (219)
Q Consensus 160 alGA~GlvIEkH~t 173 (219)
++||+|+++=+-|.
T Consensus 196 ~~GA~gV~vGs~~~ 209 (326)
T 3bo9_A 196 ALGAEAVQMGTRFV 209 (326)
T ss_dssp HHTCSEEEESHHHH
T ss_pred HhCCCEEEechHHH
Confidence 89999998876543
No 51
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=95.50 E-value=0.18 Score=47.02 Aligned_cols=151 Identities=13% Similarity=0.083 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCC----HHHHHHHHh---cCCeEEEeCCCCCCHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQ----TDLLVAAAK---TGKIINIKKGQFCASSV 74 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n----~~LL~~~a~---~gkPVilstG~~~t~~e 74 (219)
+-|+.|.++++++|+.++.++++.+.++...++ .+++-|-.+++.. +.....+.+ .+.+++-..|.. |.++
T Consensus 144 ~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~-t~ed 222 (452)
T 1pii_A 144 DQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGIN-TYAQ 222 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCC-CHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCC-CHHH
Confidence 358899999999999999999999999998888 9999888877653 333333333 278999999999 9999
Q ss_pred HHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHH
Q 027740 75 MVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCI 154 (219)
Q Consensus 75 i~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~ 154 (219)
+..+.+. . +-+|+=...+ ..++ . -.++..|..-.+.|+ --+. ..-
T Consensus 223 v~~~~~~-a-----~avLVGealm-r~~d--~-~~~~~~l~~~~~KIC---Git~----------------------~ed 267 (452)
T 1pii_A 223 VRELSHF-A-----NGFLIGSALM-AHDD--L-HAAVRRVLLGENKVC---GLTR----------------------GQD 267 (452)
T ss_dssp HHHHTTT-C-----SEEEECHHHH-TCSC--H-HHHHHHHHHCSCEEC---CCCS----------------------HHH
T ss_pred HHHHHHh-C-----CEEEEcHHHc-CCcC--H-HHHHHHHHHHhcccc---CCCc----------------------HHH
Confidence 9887654 1 2333322211 1121 1 134444443234553 2221 556
Q ss_pred HHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHH
Q 027740 155 ARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEE 196 (219)
Q Consensus 155 ~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ 196 (219)
+.+|+.+||| .+=.-|.| ..+-..++++.+++++.
T Consensus 268 a~~a~~~Gad--~iGfIf~~-----~SpR~V~~~~a~~i~~~ 302 (452)
T 1pii_A 268 AKAAYDAGAI--YGGLIFVA-----TSPRCVNVEQAQEVMAA 302 (452)
T ss_dssp HHHHHHHTCS--EEEEECCT-----TCTTBCCHHHHHHHHHH
T ss_pred HHHHHhcCCC--EEEeecCC-----CCCCCCCHHHHHHHHhc
Confidence 7899999999 55555543 24445677787777654
No 52
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.42 E-value=0.22 Score=44.05 Aligned_cols=144 Identities=15% Similarity=0.101 Sum_probs=92.7
Q ss_pred HHHHHHHHHhcCCCe-EeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPI-VTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~-~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i 82 (219)
=..|++..++-+.++ +-++||..+...+++. ++.+.+++.- -..+..|.| .++.. |++|+..-++.|
T Consensus 6 ~~~Lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~-------~a~~~~G~p---D~~~v-t~~em~~~~~~I 74 (302)
T 3fa4_A 6 ATSLRRALENPDSFIVAPGVYDGLSARVALSAGFDALYMTGAG-------TAASVHGQA---DLGIC-TLNDMRANAEMI 74 (302)
T ss_dssp HHHHHHHHHSTTCCEEEEEECSHHHHHHHHTTTCSCEEECHHH-------HHHHHHSCC---SSSCC-CHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeCcHH-------HHHHHcCCC---CCCcC-CHHHHHHHHHHH
Confidence 356778878777554 6799999999999998 9999886532 122346888 67776 999998877766
Q ss_pred HHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC
Q 027740 83 RLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG 162 (219)
Q Consensus 83 ~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG 162 (219)
... + .++||++|-+... |...-+....+.....|
T Consensus 75 ~~~-----------~-------------------~~~PviaD~d~Gy----------------g~~~~v~~tv~~l~~aG 108 (302)
T 3fa4_A 75 SNI-----------S-------------------PSTPVIADADTGY----------------GGPIMVARTTEQYSRSG 108 (302)
T ss_dssp HTT-----------S-------------------TTSCEEEECTTTT----------------SSHHHHHHHHHHHHHTT
T ss_pred Hhh-----------c-------------------cCCCEEEECCCCC----------------CCHHHHHHHHHHHHHcC
Confidence 421 0 2578989877653 32222334455667899
Q ss_pred CcEEEEeeecCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhC
Q 027740 163 VDGVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKVSK 205 (219)
Q Consensus 163 A~GlvIEkH~t~d~a~-~D~~~sl~p~el~~lv~~ir~i~~~lg 205 (219)
|.|+-||-...|.|.- .+++.-.+.+|+-.=++..+......+
T Consensus 109 aagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~ 152 (302)
T 3fa4_A 109 VAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIG 152 (302)
T ss_dssp CCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC
Confidence 9999999877666542 244555566666555555554444334
No 53
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.36 E-value=0.5 Score=41.08 Aligned_cols=137 Identities=16% Similarity=0.090 Sum_probs=95.9
Q ss_pred HHHHHHHHHHhcCCCeEeee--CCcccHHHHhhh-ccccccCCCCCCCH---HHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDV--HETVQCEEVGKV-ADIIQIPAFLCRQT---DLLVAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~--~d~~~~~~l~~~-vd~~kI~S~~~~n~---~LL~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
.+..|.+.++..++|++.-- .|+.+++.+... +|.+-+....+.+. .|++.+-+.|+-+++... +.+|++.
T Consensus 108 s~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh---~~eEl~~ 184 (272)
T 3tsm_A 108 APEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVH---DEAEMER 184 (272)
T ss_dssp CHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHH
Confidence 46778888899999998743 678888888888 99988887777653 566667788999999985 8999887
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHH
Q 027740 78 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCI 154 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~ 154 (219)
|.+ .|..-|-+-.| ++....+|+.....|.. . ++||+.- + |... +.-
T Consensus 185 A~~----~ga~iIGinnr----~l~t~~~dl~~~~~L~~~ip~~~~vIae-s-------------------GI~t--~ed 234 (272)
T 3tsm_A 185 ALK----LSSRLLGVNNR----NLRSFEVNLAVSERLAKMAPSDRLLVGE-S-------------------GIFT--HED 234 (272)
T ss_dssp HTT----SCCSEEEEECB----CTTTCCBCTHHHHHHHHHSCTTSEEEEE-S-------------------SCCS--HHH
T ss_pred HHh----cCCCEEEECCC----CCccCCCChHHHHHHHHhCCCCCcEEEE-C-------------------CCCC--HHH
Confidence 753 45543322223 23334578888777765 3 6777652 2 2110 445
Q ss_pred HHHHHHcCCcEEEEeeecC
Q 027740 155 ARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 155 ~~aAvalGA~GlvIEkH~t 173 (219)
...+..+||+|++|=..++
T Consensus 235 v~~l~~~Ga~gvLVG~alm 253 (272)
T 3tsm_A 235 CLRLEKSGIGTFLIGESLM 253 (272)
T ss_dssp HHHHHTTTCCEEEECHHHH
T ss_pred HHHHHHcCCCEEEEcHHHc
Confidence 5677899999999876644
No 54
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.32 E-value=0.5 Score=38.92 Aligned_cols=137 Identities=13% Similarity=0.151 Sum_probs=81.7
Q ss_pred HHHHHHHHHhcCCCeEeee---C---------CcccHHHHhhh-ccccccCCCCCCC------HHHHHHHHhc--CCeEE
Q 027740 5 LKILEKVKIAYDIPIVTDV---H---------ETVQCEEVGKV-ADIIQIPAFLCRQ------TDLLVAAAKT--GKIIN 63 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~---~---------d~~~~~~l~~~-vd~~kI~S~~~~n------~~LL~~~a~~--gkPVi 63 (219)
...+++.++..+++|+.-. | ..++++.+.+. +|++-++.....+ .++++.+.+. +++|+
T Consensus 58 ~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~ 137 (234)
T 1yxy_A 58 VRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLM 137 (234)
T ss_dssp HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEE
Confidence 4567777777888886321 1 12456666666 8888777665433 5788888877 88988
Q ss_pred EeCCCCCCHHHHHHHHHHHHHcCCCcEE-EEeecCCCCCC-CCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCC
Q 027740 64 IKKGQFCASSVMVNSAEKVRLAGNPNVM-VCERGTMFGYN-DLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGG 141 (219)
Q Consensus 64 lstG~~~t~~ei~~A~e~i~~~Gn~~i~-L~~cgs~~~~~-~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~ 141 (219)
++.. |++|...+ ...|..-+. .+..... +.. ....++..+..+++.++||+.+.
T Consensus 138 ~~~~---t~~ea~~a----~~~Gad~i~~~v~g~~~-~~~~~~~~~~~~i~~~~~~~ipvia~G---------------- 193 (234)
T 1yxy_A 138 ADIS---TFDEGLVA----HQAGIDFVGTTLSGYTP-YSRQEAGPDVALIEALCKAGIAVIAEG---------------- 193 (234)
T ss_dssp EECS---SHHHHHHH----HHTTCSEEECTTTTSST-TSCCSSSCCHHHHHHHHHTTCCEEEES----------------
T ss_pred EeCC---CHHHHHHH----HHcCCCEEeeeccccCC-CCcCCCCCCHHHHHHHHhCCCCEEEEC----------------
Confidence 8653 78885444 345664331 1221111 110 12346666666654479998752
Q ss_pred ccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 142 VASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 142 ~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
|.+. ..-+....++||+|+++=+-
T Consensus 194 ----GI~s--~~~~~~~~~~Gad~v~vGsa 217 (234)
T 1yxy_A 194 ----KIHS--PEEAKKINDLGVAGIVVGGA 217 (234)
T ss_dssp ----CCCS--HHHHHHHHTTCCSEEEECHH
T ss_pred ----CCCC--HHHHHHHHHCCCCEEEEchH
Confidence 3211 33455677889999988654
No 55
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=95.24 E-value=0.33 Score=40.08 Aligned_cols=143 Identities=13% Similarity=0.049 Sum_probs=88.9
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i 82 (219)
++.+++..+ ..+.+-. ++++.++++...+. +|++-.|. .+.++.+++.+.|.|+++. .. |++|+..|.+
T Consensus 52 ~~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~---~d~~v~~~~~~~g~~~i~G--~~-t~~e~~~A~~-- 122 (207)
T 2yw3_A 52 LEALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSPG---LLEEVAALAQARGVPYLPG--VL-TPTEVERALA-- 122 (207)
T ss_dssp HHHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEESS---CCHHHHHHHHHHTCCEEEE--EC-SHHHHHHHHH--
T ss_pred HHHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEEec--CC-CHHHHHHHHH--
Confidence 333444433 4443333 46677777777777 88887664 4688889888999999984 44 9999988754
Q ss_pred HHcCCCcEEEEeecCCCCCCCCCc-cchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 027740 83 RLAGNPNVMVCERGTMFGYNDLIV-DPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 159 (219)
Q Consensus 83 ~~~Gn~~i~L~~cgs~~~~~~~~~-nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv 159 (219)
.|..-+.+ ||.+ .+ -+..+..++. + ++|++. . ||.. ..-.....
T Consensus 123 --~Gad~v~~------fpa~--~~gG~~~lk~l~~~~~~ipvva--i------------------GGI~---~~n~~~~l 169 (207)
T 2yw3_A 123 --LGLSALKF------FPAE--PFQGVRVLRAYAEVFPEVRFLP--T------------------GGIK---EEHLPHYA 169 (207)
T ss_dssp --TTCCEEEE------TTTT--TTTHHHHHHHHHHHCTTCEEEE--B------------------SSCC---GGGHHHHH
T ss_pred --CCCCEEEE------ecCc--cccCHHHHHHHHhhCCCCcEEE--e------------------CCCC---HHHHHHHH
Confidence 57765555 4422 23 4466777777 6 899864 1 2322 12234567
Q ss_pred HcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 027740 160 AVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 160 alGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~ 199 (219)
++||+|+.+=+-++. -++++.++..+++.+
T Consensus 170 ~aGa~~vavgSai~~----------~d~~~i~~~a~~~~~ 199 (207)
T 2yw3_A 170 ALPNLLAVGGSWLLQ----------GNLEAVRAKVRAAKA 199 (207)
T ss_dssp TCSSBSCEEESGGGS----------SCHHHHHHHHHHHHH
T ss_pred hCCCcEEEEehhhhC----------CCHHHHHHHHHHHHH
Confidence 889998887554443 245555555554443
No 56
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=95.13 E-value=0.39 Score=39.84 Aligned_cols=162 Identities=13% Similarity=0.066 Sum_probs=94.5
Q ss_pred hHHHHHHHHHHhcCCCeEeeeC-Cc-------ccHHHHhhh-ccccccCCCCCCCH-HHHHHHHhcCCeEEEeCCCCCCH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVH-ET-------VQCEEVGKV-ADIIQIPAFLCRQT-DLLVAAAKTGKIINIKKGQFCAS 72 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~-d~-------~~~~~l~~~-vd~~kI~S~~~~n~-~LL~~~a~~gkPVilstG~~~t~ 72 (219)
.+++.+++.++..++++..-.. ++ +.++.+.+. +|.+-++.....+. .+++.+.+.|..+++.-... |.
T Consensus 67 ~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~-t~ 145 (248)
T 1geq_A 67 EAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPN-TP 145 (248)
T ss_dssp HHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTT-CC
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCC-CH
Confidence 3578888888888888776542 43 566666677 89999987666554 45566666788877755555 66
Q ss_pred HHHHHHHHHHHHcCCCcEEEEeecCCCCCC-----CCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 73 SVMVNSAEKVRLAGNPNVMVCERGTMFGYN-----DLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~-----~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
.|...++. .. ...++.+ ++..++. ....++..+..+++ .++||..+ +|
T Consensus 146 ~e~~~~~~---~~-~d~~i~~--~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~--------------------GG 199 (248)
T 1geq_A 146 DERLKVID---DM-TTGFVYL--VSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVG--------------------FG 199 (248)
T ss_dssp HHHHHHHH---HH-CSSEEEE--ECCC-------CCCHHHHHHHHHHHHHCSSCEEEE--------------------SC
T ss_pred HHHHHHHH---hc-CCCeEEE--EECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEE--------------------ee
Confidence 66555443 22 2223333 2222111 00123566777777 78999874 23
Q ss_pred CcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 147 LRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 147 ~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
.+. ..-.......||+|+++=+-+.-. ..+. ++..+++++.+++.
T Consensus 200 I~~--~e~i~~~~~~Gad~vivGsai~~~--~~~~-----~~~~~~~~~~~~~~ 244 (248)
T 1geq_A 200 VSK--REHVVSLLKEGANGVVVGSALVKI--IGEK-----GREATEFLKKKVEE 244 (248)
T ss_dssp CCS--HHHHHHHHHTTCSEEEECHHHHHH--HHHH-----GGGCHHHHHHHHHH
T ss_pred cCC--HHHHHHHHHcCCCEEEEcHHHHhh--HhhC-----hHHHHHHHHHHHHH
Confidence 221 133445568899999887654311 1001 15667777776553
No 57
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=95.08 E-value=0.0085 Score=50.42 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=45.9
Q ss_pred HHHHHHHHHhcCCCeEee--eCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHh-cCC-eEEEe--C------CCC--
Q 027740 5 LKILEKVKIAYDIPIVTD--VHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAK-TGK-IINIK--K------GQF-- 69 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt--~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~-~gk-PVils--t------G~~-- 69 (219)
+..+++.+++.++|++.. +.++++++.+.+. +|.+-||+..+.|.+++.++.+ .|. -|+++ . +.-
T Consensus 68 ~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~ 147 (247)
T 3tdn_A 68 TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFT 147 (247)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHCTHHHHHHHHHHC---------------------
T ss_pred HHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEE
Confidence 577889999999999885 7788899888777 9999999999999887776654 332 12222 1 111
Q ss_pred -----CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEE
Q 027740 70 -----CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVA 123 (219)
Q Consensus 70 -----~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ 123 (219)
.+-.+....++.+...|...+++ +..+.-+.. .-.|+..+..+++ .++||+.
T Consensus 148 ~g~~~~~~~~~~~~a~~~~~~G~~~i~~-t~~~~~g~~-~g~~~~~~~~i~~~~~iPvia 205 (247)
T 3tdn_A 148 YSGKKNTGILLRDWVVEVEKRGAGEILL-TSIDRDGTK-SGYDTEMIRFVRPLTTLPIIA 205 (247)
T ss_dssp ------------------------------------------------------------
T ss_pred CCCcccCCCCHHHHHHHHHhcCCCEEEE-ecccCCCCc-CCCCHHHHHHHHHhCCCCEEE
Confidence 01112223344455556655544 322211111 1246667777777 7899976
No 58
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.89 E-value=0.35 Score=43.48 Aligned_cols=140 Identities=16% Similarity=0.129 Sum_probs=79.6
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--cccHHHHhhh-ccccccCCCCCCC---HHHHHHHHhc-CCeEEEeCCCCCCHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TVQCEEVGKV-ADIIQIPAFLCRQ---TDLLVAAAKT-GKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~~~~~l~~~-vd~~kI~S~~~~n---~~LL~~~a~~-gkPVilstG~~~t~~ei~~ 77 (219)
+.+++++++...++|..-+.- .+.++.+.+. +|++-|.+..-.. .+.++++.+. +.||++++- .|.++...
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v--~t~e~A~~ 161 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV--VTEEATKE 161 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEE--CSHHHHHH
T ss_pred HHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccC--CCHHHHHH
Confidence 455666665556776665543 4556666666 8888764332222 3556665554 899999554 37877655
Q ss_pred HHHHHHHcCCCcEEEE-----eecCCC--CCCCCCccchhHHHHH---h-cCCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 78 SAEKVRLAGNPNVMVC-----ERGTMF--GYNDLIVDPRNLEWMR---E-ANCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~-----~cgs~~--~~~~~~~nl~~i~~lk---~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
+ .+.|..-|.+- +|++.. +.. ..++.++..++ + .++||+.+ +|
T Consensus 162 l----~~aGaD~I~VG~~~Gs~~~tr~~~g~g--~p~~~~i~~v~~~~~~~~iPVIA~--------------------GG 215 (361)
T 3khj_A 162 L----IENGADGIKVGIGPGSICTTRIVAGVG--VPQITAIEKCSSVASKFGIPIIAD--------------------GG 215 (361)
T ss_dssp H----HHTTCSEEEECSSCCTTCCHHHHTCBC--CCHHHHHHHHHHHHHHHTCCEEEE--------------------SC
T ss_pred H----HHcCcCEEEEecCCCcCCCcccccCCC--CCcHHHHHHHHHHHhhcCCeEEEE--------------------CC
Confidence 4 44677655541 222210 110 12455555553 2 58999875 23
Q ss_pred CcccHHHHHHHHHHcCCcEEEEeeecCC
Q 027740 147 LRELIPCIARTAIAVGVDGVFMEVHDDP 174 (219)
Q Consensus 147 ~~~~~~~~~~aAvalGA~GlvIEkH~t~ 174 (219)
.+. ..-...|.++||+|+++=+-|.-
T Consensus 216 I~~--~~di~kala~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 216 IRY--SGDIGKALAVGASSVMIGSILAG 241 (361)
T ss_dssp CCS--HHHHHHHHHHTCSEEEESTTTTT
T ss_pred CCC--HHHHHHHHHcCCCEEEEChhhhc
Confidence 221 23345788899999987655443
No 59
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=94.88 E-value=0.096 Score=45.86 Aligned_cols=112 Identities=13% Similarity=0.069 Sum_probs=68.1
Q ss_pred CCCCCCCHHHH----HHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCCCCCccchhHHHHH
Q 027740 42 PAFLCRQTDLL----VAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYNDLIVDPRNLEWMR 115 (219)
Q Consensus 42 ~S~~~~n~~LL----~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~-~~~~~~~nl~~i~~lk 115 (219)
|+..+++..++ +++.+ .+.||.+|...+.+.+|....++.+.+.|..-|++ |.++.. .|. ...++..+..++
T Consensus 104 G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v-~g~~~~~~~~-~~~~~~~i~~i~ 181 (318)
T 1vhn_A 104 GGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFI-HTRTVVQSFT-GRAEWKALSVLE 181 (318)
T ss_dssp GGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEE-ESSCTTTTTS-SCCCGGGGGGSC
T ss_pred ccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEE-cCCCccccCC-CCcCHHHHHHHH
Confidence 44455555444 44433 57999999744333444446677788889866655 655432 121 124566666666
Q ss_pred hcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH-cCCcEEEEeeecCCCCCC
Q 027740 116 EANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA-VGVDGVFMEVHDDPLNAP 178 (219)
Q Consensus 116 ~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAva-lGA~GlvIEkH~t~d~a~ 178 (219)
+ ++||+.+.+-.. ..-+..+++ .||||++|=+-+--+..+
T Consensus 182 ~-~ipVi~~GgI~s----------------------~~da~~~l~~~gad~V~iGR~~l~~P~l 222 (318)
T 1vhn_A 182 K-RIPTFVSGDIFT----------------------PEDAKRALEESGCDGLLVARGAIGRPWI 222 (318)
T ss_dssp C-SSCEEEESSCCS----------------------HHHHHHHHHHHCCSEEEESGGGTTCTTH
T ss_pred c-CCeEEEECCcCC----------------------HHHHHHHHHcCCCCEEEECHHHHhCcch
Confidence 6 899998644321 344556666 799999998876554443
No 60
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.85 E-value=0.66 Score=41.07 Aligned_cols=146 Identities=14% Similarity=0.124 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhcC-CCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 4 GLKILEKVKIAYD-IPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 4 gl~~L~~~~~~~G-i~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
.-..|++..++-| ..++-++||..+...+++. ++.+.+++.-+ ..+..|.| .++.. |++|+..-++.
T Consensus 12 ~a~~lr~ll~~~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~-------a~s~~G~p---D~~~v-t~~em~~~~~~ 80 (307)
T 3lye_A 12 GAKKLRHLLENTDELIVCPGVYDGLSARTAMELGFKSLYMTGAGT-------TASRLGQP---DLAIA-QLHDMRDNADM 80 (307)
T ss_dssp HHHHHHHHHHHCCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHH-------HHHHHCCC---SSSCS-CHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHH-------HHHhcCCC---CCCCC-CHHHHHHHHHh
Confidence 3456778777765 4457799999999999998 99999865432 13346888 67777 99999877776
Q ss_pred HHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc
Q 027740 82 VRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV 161 (219)
Q Consensus 82 i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAval 161 (219)
|... + + +++||++|-+... |...-+....+.....
T Consensus 81 i~r~-----------~---------~---------~~~PviaD~d~Gy----------------g~~~~v~~~v~~l~~a 115 (307)
T 3lye_A 81 IANL-----------D---------P---------FGPPLIADMDTGY----------------GGPIMVARTVEHYIRS 115 (307)
T ss_dssp HHTS-----------S---------T---------TSCCEEEECTTCS----------------SSHHHHHHHHHHHHHT
T ss_pred hhcc-----------C---------C---------CCCcEEEECCCCC----------------CCHHHHHHHHHHHHHc
Confidence 6421 0 0 3589999877653 3232234445566789
Q ss_pred CCcEEEEeeecCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhC
Q 027740 162 GVDGVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKVSK 205 (219)
Q Consensus 162 GA~GlvIEkH~t~d~a~-~D~~~sl~p~el~~lv~~ir~i~~~lg 205 (219)
||.|+-||-...|.|.- .+++.-.+.+|+-.-++..+......|
T Consensus 116 Gaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~ 160 (307)
T 3lye_A 116 GVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLR 160 (307)
T ss_dssp TCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC
Confidence 99999999876665431 134445566666555555555544445
No 61
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.83 E-value=1.6 Score=38.33 Aligned_cols=102 Identities=12% Similarity=0.012 Sum_probs=66.4
Q ss_pred HHHHHHHHh-cCCeEEEeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCC-CCCccchhHHHHHh-cC
Q 027740 49 TDLLVAAAK-TGKIINIKKGQ------FCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYN-DLIVDPRNLEWMRE-AN 118 (219)
Q Consensus 49 ~~LL~~~a~-~gkPVilstG~------~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~-~~~-~~~~nl~~i~~lk~-~~ 118 (219)
.++++++-+ .+.||.++-.. ..+.++....++.+...|..-|.+..++... .++ ....++..+..+|+ ++
T Consensus 198 ~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~ 277 (338)
T 1z41_A 198 REIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD 277 (338)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC
Confidence 355555544 38999999543 3478999999999999998766665432210 011 11246677788888 89
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeeec
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 172 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH~ 172 (219)
+||+....-. . ...+..+++.| ||++++=+-+
T Consensus 278 iPVi~~Ggi~-----------------s-----~~~a~~~l~~G~aD~V~iGR~~ 310 (338)
T 1z41_A 278 MATGAVGMIT-----------------D-----GSMAEEILQNGRADLIFIGREL 310 (338)
T ss_dssp CEEEECSSCC-----------------S-----HHHHHHHHHTTSCSEEEECHHH
T ss_pred CCEEEECCCC-----------------C-----HHHHHHHHHcCCceEEeecHHH
Confidence 9998742221 1 45667888888 9988776553
No 62
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=94.78 E-value=0.061 Score=46.97 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=61.2
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..+++++++|++-.. .+.+. |++- +|++-|++-+-.+.++..++.+.||+|++.+.++.|++|.+..++..++
T Consensus 69 ~a~~~a~~~g~~~~y-----~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 143 (393)
T 4fb5_A 69 LAEARAGEFGFEKAT-----ADWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAER 143 (393)
T ss_dssp THHHHHHHHTCSEEE-----SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeec-----CCHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHh
Confidence 356778899987332 23444 4554 9999999999999999999999999999999999999999988887665
Q ss_pred cC
Q 027740 85 AG 86 (219)
Q Consensus 85 ~G 86 (219)
.|
T Consensus 144 ~g 145 (393)
T 4fb5_A 144 SG 145 (393)
T ss_dssp SS
T ss_pred cC
Confidence 54
No 63
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.66 E-value=0.21 Score=42.24 Aligned_cols=86 Identities=14% Similarity=0.198 Sum_probs=64.2
Q ss_pred HHHHHHHHHhcCCCeEeee----------CCcccH----HHHhhh-ccccccCCCCCCCHHHHHHHHh-cCCeEEEeCCC
Q 027740 5 LKILEKVKIAYDIPIVTDV----------HETVQC----EEVGKV-ADIIQIPAFLCRQTDLLVAAAK-TGKIINIKKGQ 68 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~----------~d~~~~----~~l~~~-vd~~kI~S~~~~n~~LL~~~a~-~gkPVilstG~ 68 (219)
++.+.+.|+++|++++... +++..+ ..+.+. +|+++++. -.+.++++++.+ .+.||+.+-|.
T Consensus 134 ~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~--~~~~~~l~~i~~~~~ipvva~GGi 211 (273)
T 2qjg_A 134 LGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY--TGDIDSFRDVVKGCPAPVVVAGGP 211 (273)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC--CSSHHHHHHHHHHCSSCEEEECCS
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHhCCCCEEEEeCC
Confidence 5678889999999999876 555444 334455 89999984 357888888874 68999999998
Q ss_pred CC-CHHHHHHHHHHHHHcCCCcEEE
Q 027740 69 FC-ASSVMVNSAEKVRLAGNPNVMV 92 (219)
Q Consensus 69 ~~-t~~ei~~A~e~i~~~Gn~~i~L 92 (219)
.. +.+++...+..+...|..-+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 212 KTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp CCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 84 2888887777777788864443
No 64
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.60 E-value=0.059 Score=43.77 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=86.0
Q ss_pred hhHHHHHHHHHHh-cCCCeEeeeCC---ccc-HHHHhhh-ccccccCCCCC-CC-HHHHHHHHhcCCeEEEe-CCCCCCH
Q 027740 2 VEGLKILEKVKIA-YDIPIVTDVHE---TVQ-CEEVGKV-ADIIQIPAFLC-RQ-TDLLVAAAKTGKIINIK-KGQFCAS 72 (219)
Q Consensus 2 ~~gl~~L~~~~~~-~Gi~~~tt~~d---~~~-~~~l~~~-vd~~kI~S~~~-~n-~~LL~~~a~~gkPVils-tG~~~t~ 72 (219)
..|++.+++.++. .++++.....- ++. ++.+.+. +|++-++.... .+ ..+++++.+.|+++++. .+.. |+
T Consensus 38 ~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-t~ 116 (211)
T 3f4w_A 38 REGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVD-DL 116 (211)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCS-SH
T ss_pred hccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCC-CH
Confidence 3577888888877 48888765422 222 5666666 89888877654 23 56777787889999875 3333 44
Q ss_pred HHHHHHHHHHHHcCCCcEEEEeecCC-CCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcc
Q 027740 73 SVMVNSAEKVRLAGNPNVMVCERGTM-FGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 149 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~i~L~~cgs~-~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~ 149 (219)
.| .++.+...|.. ++-++.|.. ..++. .++..+..+++ + ++||..+ +|.+
T Consensus 117 ~~---~~~~~~~~g~d-~i~v~~g~~g~~~~~--~~~~~i~~l~~~~~~~~i~~~--------------------gGI~- 169 (211)
T 3f4w_A 117 PA---RVRLLEEAGAD-MLAVHTGTDQQAAGR--KPIDDLITMLKVRRKARIAVA--------------------GGIS- 169 (211)
T ss_dssp HH---HHHHHHHHTCC-EEEEECCHHHHHTTC--CSHHHHHHHHHHCSSCEEEEE--------------------SSCC-
T ss_pred HH---HHHHHHHcCCC-EEEEcCCCcccccCC--CCHHHHHHHHHHcCCCcEEEE--------------------CCCC-
Confidence 22 23344456765 444443321 00111 25667788887 5 8898774 1221
Q ss_pred cHHHHHHHHHHcCCcEEEEeeecC
Q 027740 150 LIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 150 ~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
..-...+.++||||+++=+-+.
T Consensus 170 --~~~~~~~~~~Gad~vvvGsai~ 191 (211)
T 3f4w_A 170 --SQTVKDYALLGPDVVIVGSAIT 191 (211)
T ss_dssp --TTTHHHHHTTCCSEEEECHHHH
T ss_pred --HHHHHHHHHcCCCEEEECHHHc
Confidence 1234567788999998876543
No 65
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.53 E-value=0.62 Score=41.41 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=76.4
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-cccc-ccCCCCCCCHHHHHHHHhcCCeEEEeCCCC--CC----------
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADII-QIPAFLCRQTDLLVAAAKTGKIINIKKGQF--CA---------- 71 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~-kI~S~~~~n~~LL~~~a~~gkPVilstG~~--~t---------- 71 (219)
+.++...++.++++.-+-++++-++...+. ++++ -|.+.. .-.++..+++.|.||++-.-.+ -|
T Consensus 95 pvI~~l~~~~~vpISIDT~~~~Va~aAl~aGa~iINDVsg~~--~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv 172 (314)
T 3tr9_A 95 PVIDAIKKRFPQLISVDTSRPRVMREAVNTGADMINDQRALQ--LDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFL 172 (314)
T ss_dssp HHHHHHHHHCCSEEEEECSCHHHHHHHHHHTCCEEEETTTTC--STTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHH
T ss_pred HHHHHHHhhCCCeEEEeCCCHHHHHHHHHcCCCEEEECCCCC--chHHHHHHHHhCCeEEEECCCCCCcccccccccchH
Confidence 445556666799999999999988887776 6654 344444 2378899999999999965322 12
Q ss_pred ---HHHHHHHHHHHHHcCCC--cEEEEeecCC---CCCCCCCccc---hhHHHHHhcCCCEEEc
Q 027740 72 ---SSVMVNSAEKVRLAGNP--NVMVCERGTM---FGYNDLIVDP---RNLEWMREANCPVVAD 124 (219)
Q Consensus 72 ---~~ei~~A~e~i~~~Gn~--~i~L~~cgs~---~~~~~~~~nl---~~i~~lk~~~~pV~~d 124 (219)
.+.+.+.++.+.+.|.+ +| ++..|.- |+-. .+-|+ +.+..++.+++|+.+-
T Consensus 173 ~ev~~~l~~~i~~a~~~GI~~~~I-ilDPG~G~~~F~Kt-~~~n~~lL~~l~~l~~lg~PvL~G 234 (314)
T 3tr9_A 173 QSVKKELQESIQRCKKAGISEDRI-IIDPGFGQGNYGKN-VSENFYLLNKLPEFVAMGLPVLSG 234 (314)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGE-EEECCCCSGGGCCC-HHHHHHHHHTTHHHHTTSSCBEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHE-EEeCCCCchhhcCC-HHHHHHHHHHHHHHhcCCCCEEEE
Confidence 45566677788889986 55 5677765 5322 11133 3445555578998873
No 66
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=94.48 E-value=0.07 Score=46.49 Aligned_cols=76 Identities=14% Similarity=0.111 Sum_probs=61.7
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
...+++++++|++-.. .+.+. |++- +|++-|++-+-.+.++..++.+.||+|++.+.++.|++|.+..++..+
T Consensus 60 ~~a~~~a~~~g~~~~y-----~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 134 (350)
T 4had_A 60 TRAREMADRFSVPHAF-----GSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARD 134 (350)
T ss_dssp HHHHHHHHHHTCSEEE-----SSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCCeee-----CCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHH
Confidence 4567888999997432 23444 4444 999999999999999999999999999999999999999888888665
Q ss_pred HcC
Q 027740 84 LAG 86 (219)
Q Consensus 84 ~~G 86 (219)
+.|
T Consensus 135 ~~~ 137 (350)
T 4had_A 135 RNK 137 (350)
T ss_dssp HHT
T ss_pred HcC
Confidence 554
No 67
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=94.47 E-value=0.094 Score=45.70 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCC----HHHHHHHHh-c--CCeEEEeCCCCCCHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQ----TDLLVAAAK-T--GKIINIKKGQFCASSV 74 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n----~~LL~~~a~-~--gkPVilstG~~~t~~e 74 (219)
+-|+.|.++++++|+.++.++++.+.++...++ ++++-|..++... ......+.+ . +.||+-..|.. |.++
T Consensus 156 ~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIaesGI~-t~ed 234 (272)
T 3tsm_A 156 DLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESGIF-THED 234 (272)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEEESSCC-SHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEEECCCC-CHHH
Confidence 347889999999999999999999999988888 9999998877553 333444433 2 68999999999 9999
Q ss_pred HHHHHHHHHHcCCCcEEEEee
Q 027740 75 MVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 75 i~~A~e~i~~~Gn~~i~L~~c 95 (219)
+... .+.|..-+.+-+.
T Consensus 235 v~~l----~~~Ga~gvLVG~a 251 (272)
T 3tsm_A 235 CLRL----EKSGIGTFLIGES 251 (272)
T ss_dssp HHHH----HTTTCCEEEECHH
T ss_pred HHHH----HHcCCCEEEEcHH
Confidence 8865 4567665554443
No 68
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.40 E-value=0.22 Score=40.50 Aligned_cols=141 Identities=11% Similarity=0.107 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHhcCCCeEeee--CCcc-cHHHHhhh-ccccccCCCCCCCH-HHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDV--HETV-QCEEVGKV-ADIIQIPAFLCRQT-DLLVAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~--~d~~-~~~~l~~~-vd~~kI~S~~~~n~-~LL~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
.|+..+++.++..++++.... .|+. .++.+.+. +|.+++........ ..++++.+.|++++++.... |..|...
T Consensus 48 ~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~-t~~e~~~ 126 (220)
T 2fli_A 48 FGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPG-TPATALE 126 (220)
T ss_dssp BCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTT-SCGGGGG
T ss_pred cCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCC-CCHHHHH
Confidence 357777888776677666644 4443 57778788 99999977665543 45677767788899988665 5555433
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCccc---hhHHHHHh-c-----CCCEEEcCCCCCCCCCCCccCCCCccCCCCc
Q 027740 78 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDP---RNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGGLR 148 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl---~~i~~lk~-~-----~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~ 148 (219)
+. . .+ -+.+++-+.. .+++....+. ..+..+|+ . ++||.++ +|.+
T Consensus 127 ~~---~-~~-~d~vl~~~~~-~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~--------------------GGI~ 180 (220)
T 2fli_A 127 PL---L-DL-VDQVLIMTVN-PGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVD--------------------GGVD 180 (220)
T ss_dssp GG---T-TT-CSEEEEESSC-TTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEE--------------------SSCC
T ss_pred HH---H-hh-CCEEEEEEEC-CCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEE--------------------CcCC
Confidence 32 1 23 3455543322 1222212222 33455554 3 6888774 2332
Q ss_pred ccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 149 ELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 149 ~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
. .. ...+.+.||+|+++=+-++
T Consensus 181 ~--~~-~~~~~~~Gad~vvvGsai~ 202 (220)
T 2fli_A 181 N--KT-IRACYEAGANVFVAGSYLF 202 (220)
T ss_dssp T--TT-HHHHHHHTCCEEEESHHHH
T ss_pred H--HH-HHHHHHcCCCEEEEChHHh
Confidence 1 12 2346677999998876643
No 69
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=94.39 E-value=0.37 Score=43.44 Aligned_cols=127 Identities=15% Similarity=0.057 Sum_probs=77.4
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCCCCCCCCCccchhHHHHHh-cCCCEEEc
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTMFGYNDLIVDPRNLEWMRE-ANCPVVAD 124 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~-~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~d 124 (219)
+.+.++++.+ +++||++| |.. +.+++..+ .+.|..-|++- |.|..+.. -..++..+..+++ .+.||+.+
T Consensus 213 ~~~~i~~i~~~~~~Pv~vk-gv~-t~e~a~~a----~~aGad~I~vs~~gg~~~d~--~~~~~~~l~~v~~~~~~pVia~ 284 (380)
T 1p4c_A 213 NWEALRWLRDLWPHKLLVK-GLL-SAEDADRC----IAEGADGVILSNHGGRQLDC--AISPMEVLAQSVAKTGKPVLID 284 (380)
T ss_dssp CHHHHHHHHHHCCSEEEEE-EEC-CHHHHHHH----HHTTCSEEEECCGGGTSCTT--CCCGGGTHHHHHHHHCSCEEEC
T ss_pred cHHHHHHHHHhcCCCEEEE-ecC-cHHHHHHH----HHcCCCEEEEcCCCCCcCCC--CcCHHHHHHHHHHHcCCeEEEE
Confidence 5778887766 68999999 555 88876655 44688766663 33333211 1246888888887 77899885
Q ss_pred CCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 027740 125 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVS 204 (219)
Q Consensus 125 s~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~l 204 (219)
..-. . ..-...+.++||++++|=+-+.... ...+... --+.++.+++.++..-...
T Consensus 285 GGI~--------------------~--~~dv~kal~~GAdaV~iGr~~l~~~-~~~g~~~-v~~~~~~l~~el~~~m~~~ 340 (380)
T 1p4c_A 285 SGFR--------------------R--GSDIVKALALGAEAVLLGRATLYGL-AARGETG-VDEVLTLLKADIDRTLAQI 340 (380)
T ss_dssp SSCC--------------------S--HHHHHHHHHTTCSCEEESHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCC--------------------C--HHHHHHHHHhCCcHhhehHHHHHHH-HhcCHHH-HHHHHHHHHHHHHHHHHHh
Confidence 3321 1 2334567789999999877543110 0000000 0124566677777777777
Q ss_pred CC
Q 027740 205 KG 206 (219)
Q Consensus 205 g~ 206 (219)
|.
T Consensus 341 G~ 342 (380)
T 1p4c_A 341 GC 342 (380)
T ss_dssp TC
T ss_pred CC
Confidence 76
No 70
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=94.38 E-value=0.088 Score=45.89 Aligned_cols=71 Identities=8% Similarity=0.038 Sum_probs=57.3
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
...+++++++|++-.. .+.+.+ ++- +|++-|++-+-.+.++..++.+.||+|++.+.++.|++|.+.-++.
T Consensus 49 ~~a~~~a~~~g~~~~~-----~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~ 121 (390)
T 4h3v_A 49 EAVRAAAGKLGWSTTE-----TDWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAA 121 (390)
T ss_dssp HHHHHHHHHHTCSEEE-----SCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccc-----CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHH
Confidence 3567788899987432 244444 444 9999999999999999999999999999999999999998776443
No 71
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.34 E-value=0.51 Score=43.22 Aligned_cols=130 Identities=15% Similarity=0.080 Sum_probs=75.2
Q ss_pred CCeEeeeCCcccHHHHhhh-ccccccCCCCCCC---HHHHHHHHhc-CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEE
Q 027740 17 IPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQ---TDLLVAAAKT-GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVM 91 (219)
Q Consensus 17 i~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n---~~LL~~~a~~-gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~ 91 (219)
+.....+.+.+.++.+.+. +|++-+.+..-.+ .++++++.+. +.||+..+- .|.++...+. +.|..-|.
T Consensus 137 v~~~v~~~~~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V--~t~e~A~~a~----~aGAD~I~ 210 (400)
T 3ffs_A 137 VGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV--VTEEATKELI----ENGADGIK 210 (400)
T ss_dssp CEEEECCC-CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEE--CSHHHHHHHH----HTTCSEEE
T ss_pred EEeecCCCHHHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeec--CCHHHHHHHH----HcCCCEEE
Confidence 3444455567778888777 9999874443333 4677777664 899998533 3788776654 45776555
Q ss_pred EE-----eecCCCCCCCCCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC
Q 027740 92 VC-----ERGTMFGYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG 162 (219)
Q Consensus 92 L~-----~cgs~~~~~~~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG 162 (219)
+- -|++..-......++..+..+++ .++||+.+. |.+. ..-...|.++|
T Consensus 211 vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~G--------------------GI~~--~~di~kalalG 268 (400)
T 3ffs_A 211 VGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADG--------------------GIRY--SGDIGKALAVG 268 (400)
T ss_dssp ECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEES--------------------CCCS--HHHHHHHHTTT
T ss_pred EeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecC--------------------CCCC--HHHHHHHHHcC
Confidence 41 02221000001124566666653 478998752 2211 23345788999
Q ss_pred CcEEEEeeecCC
Q 027740 163 VDGVFMEVHDDP 174 (219)
Q Consensus 163 A~GlvIEkH~t~ 174 (219)
|+|++|=+-|.-
T Consensus 269 Ad~V~vGt~f~~ 280 (400)
T 3ffs_A 269 ASSVMIGSILAG 280 (400)
T ss_dssp CSEEEECGGGTT
T ss_pred CCEEEEChHHhc
Confidence 999998766553
No 72
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=94.32 E-value=0.86 Score=40.29 Aligned_cols=118 Identities=10% Similarity=0.085 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhcCCCeEe-ee----CCcccHHHHhhh-cc---c-cccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHH
Q 027740 4 GLKILEKVKIAYDIPIVT-DV----HETVQCEEVGKV-AD---I-IQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASS 73 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t-t~----~d~~~~~~l~~~-vd---~-~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ 73 (219)
-++.++.+.++.++++.- +- ++++-++...+. .+ + .-|-.. +...++..+++.|.||++..-. +++
T Consensus 110 e~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~--~~~~~~~~aa~~g~~vv~m~~~--dv~ 185 (310)
T 2h9a_B 110 LAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD--NYKPIVATCMVHGHSVVASAPL--DIN 185 (310)
T ss_dssp HHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT--THHHHHHHHHHHTCEEEEECSS--CHH
T ss_pred HHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC--ccHHHHHHHHHhCCCEEEEChh--HHH
Confidence 356677777888999977 77 777777766555 44 3 233332 3356788888999999996532 688
Q ss_pred HHHHHHHHHHHcCCC-cEEEEeecCC-CCCCCC--CccchhHHH--HH---hcCCCEEEcC
Q 027740 74 VMVNSAEKVRLAGNP-NVMVCERGTM-FGYNDL--IVDPRNLEW--MR---EANCPVVADV 125 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~-~i~L~~cgs~-~~~~~~--~~nl~~i~~--lk---~~~~pV~~ds 125 (219)
...+.++.+.+.|.+ +=+++..|.. +++..+ .-|+..|.. |. .+++|+.+-.
T Consensus 186 ~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~~~e~~~~~l~~ir~~al~~~~~lg~P~l~g~ 246 (310)
T 2h9a_B 186 LSKQLNIMIMEMNLAPNRIIMDPLIGALGYGIEYSYSIIERMRLGALTGDKILAMPVVCFI 246 (310)
T ss_dssp HHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHTTCGGGCSCBEECH
T ss_pred HHHHHHHHHHHCCCChhhEEEeCCCccccCchHhHHHHHHHHHHhhhhhhhcCCCCEEEEc
Confidence 888899999999974 3457888876 354321 124445544 32 2689988743
No 73
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=94.28 E-value=1.4 Score=37.83 Aligned_cols=151 Identities=15% Similarity=0.076 Sum_probs=90.2
Q ss_pred HHHHHHHHHh-cCCCeEeeeCCcccHHHHhhh---ccccc-cCCCCCCCH-HHHHHHHhcCCeEEEeC----CCCCCHHH
Q 027740 5 LKILEKVKIA-YDIPIVTDVHETVQCEEVGKV---ADIIQ-IPAFLCRQT-DLLVAAAKTGKIINIKK----GQFCASSV 74 (219)
Q Consensus 5 l~~L~~~~~~-~Gi~~~tt~~d~~~~~~l~~~---vd~~k-I~S~~~~n~-~LL~~~a~~gkPVilst----G~~~t~~e 74 (219)
++++....++ .++++.-+-++++-++...+. .+++- |.+.. .++ .++..+++.|.|+++-. |+.-|+++
T Consensus 57 ~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdvs~~~-d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~ 135 (262)
T 1f6y_A 57 MEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINSTNAER-EKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDT 135 (262)
T ss_dssp HHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEECSCH-HHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHH
T ss_pred HHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEECCCCc-ccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHH
Confidence 4444444443 489998898988888776554 44443 33331 232 68888999999999953 45445544
Q ss_pred H----HHHHHHHHHcCCC-cEEEEeecCC-CCCCCC--CccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCcc
Q 027740 75 M----VNSAEKVRLAGNP-NVMVCERGTM-FGYNDL--IVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVA 143 (219)
Q Consensus 75 i----~~A~e~i~~~Gn~-~i~L~~cgs~-~~~~~~--~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~ 143 (219)
. ...++.+.+.|-+ +=+++..|.. |++..+ .-.|+.+..+++ + ++|+.+-.| +.
T Consensus 136 ~~~~~~~~~~~a~~~Gi~~~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~S---------------rk 200 (262)
T 1f6y_A 136 RLAFAMELVAAADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLS---------------NV 200 (262)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEECCCCCTTTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGG---------------GG
T ss_pred HHHHHHHHHHHHHHCCCCcccEEEeCCCCcCCCChHHHHHHHHHHHHHHHHhCCCCCEEEeec---------------CC
Confidence 4 4556667788875 3357788874 333321 124566666777 6 899876222 11
Q ss_pred CCCC--cc-cHHHHHHHHHHcCCcEEEEeee
Q 027740 144 SGGL--RE-LIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 144 ~~G~--~~-~~~~~~~aAvalGA~GlvIEkH 171 (219)
+.|. ++ +-...+..|++.|++..++-.|
T Consensus 201 sfg~~~~~~l~~t~~~~a~~~g~~~~iv~~~ 231 (262)
T 1f6y_A 201 SQNCQNRPLINRTFLAMAMACGLMSAIADAC 231 (262)
T ss_dssp GTTCSSHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHhCCeEEECcC
Confidence 2231 22 2234456778899985555444
No 74
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=94.27 E-value=1.7 Score=38.06 Aligned_cols=152 Identities=19% Similarity=0.218 Sum_probs=89.6
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-cccc-ccCCCCCCCHHHHHHHHhcCCeEEEeC--CCCCC----------
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADII-QIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA---------- 71 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~-kI~S~~~~n~~LL~~~a~~gkPVilst--G~~~t---------- 71 (219)
+.++..+++ ++++.-+-++++-++...+. .+++ -|.+.+ ...++..+++.|.||++.. |+.-|
T Consensus 88 pvi~~l~~~-~vpiSIDT~~~~Va~aAl~aGa~iINdVsg~~--d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~d 164 (294)
T 2y5s_A 88 PLVEALRPL-NVPLSIDTYKPAVMRAALAAGADLINDIWGFR--QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGD 164 (294)
T ss_dssp HHHHHHGGG-CSCEEEECCCHHHHHHHHHHTCSEEEETTTTC--STTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSS
T ss_pred HHHHHHhhC-CCeEEEECCCHHHHHHHHHcCCCEEEECCCCC--chHHHHHHHHhCCCEEEECCCCCCccccccCCcccc
Confidence 334444444 99999999999988887776 6665 344444 4468889999999999954 32222
Q ss_pred -----HHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccch---hHHHHH-----hcCCCEEEcCCCC--CCCCCC
Q 027740 72 -----SSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPR---NLEWMR-----EANCPVVADVTHS--LQQPAG 134 (219)
Q Consensus 72 -----~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~---~i~~lk-----~~~~pV~~ds~Hs--~~~~~~ 134 (219)
.+++...++.+.+.|.+ +| ++..|.-|.-...+-|+. .+..++ .+++|+.+-.|.- ++
T Consensus 165 v~~ev~~~l~~~i~~a~~~Gi~~~~I-ilDPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g~Pvl~G~Srksfig---- 239 (294)
T 2y5s_A 165 VVTDVRDFLAARAQALRDAGVAAERI-CVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLG---- 239 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGE-EEECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSBCCBEEECTTCHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhhE-EEeCCCcccccchHHHHHHHHHHHHHHhccccCCCCCEEEEecccHHhh----
Confidence 45566677788889976 55 667777652211022333 333344 2468877644431 00
Q ss_pred CccCCCCccCCC-CcccH-HHHHHHHHHcCCcEEEEeee
Q 027740 135 KKLDGGGVASGG-LRELI-PCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 135 ~~~~~~~~~~~G-~~~~~-~~~~~aAvalGA~GlvIEkH 171 (219)
++ .+ .+.. .|... ...+..|+..||+ ++=.|
T Consensus 240 -~l--~g-~~~~~~R~~~t~a~~~~a~~~Ga~--IvrvH 272 (294)
T 2y5s_A 240 -AV--IG-GKPPLERVAASVAAALCAVERGAA--IVRVH 272 (294)
T ss_dssp -TT--TT-SCCGGGCHHHHHHHHHHHHHTTCS--EEEES
T ss_pred -hh--cC-CCchhhhhHHHHHHHHHHHHcCCc--EEEcC
Confidence 00 00 0011 22222 2234466888998 99999
No 75
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.25 E-value=1.6 Score=38.47 Aligned_cols=137 Identities=17% Similarity=0.190 Sum_probs=84.5
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
-..|++..++-+..++-++||..+...+++. +|.+.+++.-+.+ ..|.| +++.. |++|+...++.|.
T Consensus 18 a~~lr~l~~~~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~--------~~G~p---D~~~v-t~~em~~~~~~I~ 85 (305)
T 3ih1_A 18 ANRFRALVEANEILQIPGAHDAMAALVARNTGFLALYLSGAAYTA--------SKGLP---DLGIV-TSTEVAERARDLV 85 (305)
T ss_dssp HHHHHHHHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHH--------HHTCC---SSSCS-CHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHH--------hCCCC---CCCcC-CHHHHHHHHHHHH
Confidence 3456666666667777788888888888877 8888887754332 12544 45555 7888776666554
Q ss_pred HcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCC
Q 027740 84 LAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGV 163 (219)
Q Consensus 84 ~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA 163 (219)
.. .++||++|-+... |...-+....+.....||
T Consensus 86 r~-------------------------------~~~pviaD~d~Gy----------------g~~~~v~~~v~~l~~aGa 118 (305)
T 3ih1_A 86 RA-------------------------------TDLPVLVDIDTGF----------------GGVLNVARTAVEMVEAKV 118 (305)
T ss_dssp HH-------------------------------HCCCEEEECTTCS----------------SSHHHHHHHHHHHHHTTC
T ss_pred Hh-------------------------------cCCCEEEECCCCC----------------CCHHHHHHHHHHHHHhCC
Confidence 21 3578888877642 222223344455577899
Q ss_pred cEEEEeeecCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHH
Q 027740 164 DGVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKV 203 (219)
Q Consensus 164 ~GlvIEkH~t~d~a~-~D~~~sl~p~el~~lv~~ir~i~~~ 203 (219)
.|+-||--..|.|.- .+++.-.+.+ ++++.|+.+..+
T Consensus 119 agv~iED~~~~krcGh~~gk~l~~~~---e~~~rI~Aa~~A 156 (305)
T 3ih1_A 119 AAVQIEDQQLPKKCGHLNGKKLVTTE---ELVQKIKAIKEV 156 (305)
T ss_dssp SEEEEECBCSSCCTTCTTCCCBCCHH---HHHHHHHHHHHH
T ss_pred cEEEECCCCCCcccCCCCCCcccCHH---HHHHHHHHHHHc
Confidence 999999776655432 1333344444 455566666555
No 76
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=94.17 E-value=0.7 Score=40.60 Aligned_cols=138 Identities=9% Similarity=0.071 Sum_probs=88.3
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..|++..++-+..++-++||..+...+++. ++.+.+++.-+.+ ...|.| .++.- |++|+...++.|..
T Consensus 7 ~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~-------~~~G~p---D~~~v-t~~em~~~~~~I~~ 75 (295)
T 1xg4_A 7 KAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAA-------GSLGLP---DLGIS-TLDDVLTDIRRITD 75 (295)
T ss_dssp HHHHHHHHHSSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHH-------TTTCCC---SSSCS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhh-------hhcCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 456777677778888899999999999998 9999998863322 235777 66766 99999888877753
Q ss_pred cCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCC-CcccHHHHHHHHHHcCC
Q 027740 85 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGG-LRELIPCIARTAIAVGV 163 (219)
Q Consensus 85 ~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G-~~~~~~~~~~aAvalGA 163 (219)
. .++||++|-+..- | ....+...++..+..||
T Consensus 76 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~~~~~~v~~l~~aGa 108 (295)
T 1xg4_A 76 V-------------------------------CSLPLLVDADIGF----------------GSSAFNVARTVKSMIKAGA 108 (295)
T ss_dssp H-------------------------------CCSCEEEECTTCS----------------SSSHHHHHHHHHHHHHHTC
T ss_pred h-------------------------------CCCCEEecCCccc----------------CCCHHHHHHHHHHHHHcCC
Confidence 2 3467888776543 2 22223344455567899
Q ss_pred cEEEEeeecCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHHh
Q 027740 164 DGVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKVS 204 (219)
Q Consensus 164 ~GlvIEkH~t~d~a~-~D~~~sl~p~el~~lv~~ir~i~~~l 204 (219)
.|+-||--..|.+.- -.++.-.+.++ +++.|+.+..+.
T Consensus 109 ~gv~iEd~~~~k~cgH~~gk~L~p~~~---~~~~I~Aa~~a~ 147 (295)
T 1xg4_A 109 AGLHIEDQVGAKRSGHRPNKAIVSKEE---MVDRIRAAVDAK 147 (295)
T ss_dssp SEEEEECBCSSCCCTTSSSCCBCCHHH---HHHHHHHHHHHC
T ss_pred eEEEECCCCCCcccCCCCCCccCCHHH---HHHHHHHHHHhc
Confidence 999999765443321 12222233333 455555555543
No 77
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=94.06 E-value=0.48 Score=42.14 Aligned_cols=107 Identities=15% Similarity=0.027 Sum_probs=66.3
Q ss_pred CCCCCCCHHHHH----HHHh-cCCeEEEeC--CCC--CCHHHHHHHHHHHHHcCCCcEEEEeecCC---C-CCC---CCC
Q 027740 42 PAFLCRQTDLLV----AAAK-TGKIINIKK--GQF--CASSVMVNSAEKVRLAGNPNVMVCERGTM---F-GYN---DLI 105 (219)
Q Consensus 42 ~S~~~~n~~LL~----~~a~-~gkPVilst--G~~--~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~---~-~~~---~~~ 105 (219)
|+..+++..++. ++.+ .+.||.+|. |.. .+.++....++.+.+.|..-|++ |.++. | +.. ...
T Consensus 104 G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V-~~r~~~~g~~g~~~~~~~~ 182 (350)
T 3b0p_A 104 GACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVV-HARSALLALSTKANREIPP 182 (350)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEE-ECSCBC----------CCC
T ss_pred chhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEE-ecCchhcccCcccccCCCc
Confidence 344556655544 3333 589999964 432 13457778888888999876654 65442 2 110 012
Q ss_pred ccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 106 VDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 106 ~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
.++..+..+|+ + ++||+.+.+-. . ..-+..+++ ||||++|=+-+
T Consensus 183 ~~~~~i~~ik~~~~~iPVianGgI~--------------------s--~eda~~~l~-GaD~V~iGRa~ 228 (350)
T 3b0p_A 183 LRHDWVHRLKGDFPQLTFVTNGGIR--------------------S--LEEALFHLK-RVDGVMLGRAV 228 (350)
T ss_dssp CCHHHHHHHHHHCTTSEEEEESSCC--------------------S--HHHHHHHHT-TSSEEEECHHH
T ss_pred ccHHHHHHHHHhCCCCeEEEECCcC--------------------C--HHHHHHHHh-CCCEEEECHHH
Confidence 46778888888 7 89998853322 1 344555666 99999997654
No 78
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=93.99 E-value=0.32 Score=42.59 Aligned_cols=88 Identities=15% Similarity=0.132 Sum_probs=57.0
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC-CC-------------CCC---CCccchhHHHHHh-c--C
Q 027740 59 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM-FG-------------YND---LIVDPRNLEWMRE-A--N 118 (219)
Q Consensus 59 gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~-~~-------------~~~---~~~nl~~i~~lk~-~--~ 118 (219)
++||++|-....+.+|+...++.+.+.|..-|+ ++.++. .. +.. ....+..+..+++ . +
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~-vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ 289 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI-ATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGR 289 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE-ECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTS
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE-EeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCC
Confidence 799999987777888999999999999975554 443321 10 000 0023355666776 5 8
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+||+.+. |.+. ..-+..++++|||+++|=
T Consensus 290 ipVi~~G--------------------GI~~--~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 290 LPIIGVG--------------------GIDS--VIAAREKIAAGASLVQIY 318 (336)
T ss_dssp SCEEEES--------------------SCCS--HHHHHHHHHHTCSEEEES
T ss_pred CCEEEEC--------------------CCCC--HHHHHHHHHCCCCEEEee
Confidence 9998742 2221 455677888999977663
No 79
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=93.95 E-value=0.63 Score=40.78 Aligned_cols=136 Identities=11% Similarity=0.040 Sum_probs=88.1
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..|++..++-+..++-++||..+...+++. +|.+.+++.-+.+ +..|.| +++.- |++|+...++.|..
T Consensus 11 ~~lr~l~~~~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~-------~~lG~p---D~~~v-t~~em~~~~~~I~r 79 (287)
T 3b8i_A 11 AMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASL-------QVLAAP---DFALI-TLSEFVEQATRIGR 79 (287)
T ss_dssp HHHHHHHHSSCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHH-------HHHSCC---SSSCS-CHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHH-------HhcCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 456677666678888899999999999998 9999998864332 134665 45666 89999888877753
Q ss_pred cCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 85 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 85 ~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
. .++||++|-+..- |...-+...++..+..||.
T Consensus 80 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~~~~~v~~l~~aGa~ 112 (287)
T 3b8i_A 80 V-------------------------------ARLPVIADADHGY----------------GNALNVMRTVVELERAGIA 112 (287)
T ss_dssp T-------------------------------CSSCEEEECTTCS----------------SSHHHHHHHHHHHHHHTCS
T ss_pred c-------------------------------CCCCEEEECCCCC----------------CCHHHHHHHHHHHHHhCCe
Confidence 2 1367777766543 2222233344455678999
Q ss_pred EEEEeeecCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHH
Q 027740 165 GVFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKV 203 (219)
Q Consensus 165 GlvIEkH~t~d~a~-~D~~~sl~p~el~~lv~~ir~i~~~ 203 (219)
|+-||--..|.|.= .+++ -.+.+++ ++.|+.+.++
T Consensus 113 gv~iED~~~pKrcgh~~gk-l~~~~e~---~~~I~aa~~a 148 (287)
T 3b8i_A 113 ALTIEDTLLPAQFGRKSTD-LICVEEG---VGKIRAALEA 148 (287)
T ss_dssp EEEEECBCCSCCTTTCTTC-BCCHHHH---HHHHHHHHHH
T ss_pred EEEEcCCCCccccCCCCCC-ccCHHHH---HHHHHHHHHc
Confidence 99999776666542 2344 4555555 4444444443
No 80
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=93.90 E-value=0.14 Score=45.12 Aligned_cols=92 Identities=14% Similarity=0.204 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHhcCCCeEeeeC----Ccc-----------cHHHHhhh-ccccccCCC-CCC-C-HHHHHHHHh----cC
Q 027740 3 EGLKILEKVKIAYDIPIVTDVH----ETV-----------QCEEVGKV-ADIIQIPAF-LCR-Q-TDLLVAAAK----TG 59 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~----d~~-----------~~~~l~~~-vd~~kI~S~-~~~-n-~~LL~~~a~----~g 59 (219)
+-+..+.+.|+++|++++.+++ ... .+..+.++ +|++|++.. +-+ . ..+.+.+.. ++
T Consensus 142 ~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~ 221 (304)
T 1to3_A 142 NMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN 221 (304)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC
Confidence 3467888999999999999875 111 24445556 999999883 211 3 344444555 69
Q ss_pred Ce-EEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 027740 60 KI-INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT 97 (219)
Q Consensus 60 kP-VilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs 97 (219)
.| |+++=|. +.+++.+.++.+...|. +.+++=|..
T Consensus 222 ~P~Vv~aGG~--~~~~~~~~~~~a~~aGa-~Gv~vGRaI 257 (304)
T 1to3_A 222 MPWVILSSGV--DEKLFPRAVRVAMEAGA-SGFLAGRAV 257 (304)
T ss_dssp SCEEECCTTS--CTTTHHHHHHHHHHTTC-CEEEESHHH
T ss_pred CCeEEEecCC--CHHHHHHHHHHHHHcCC-eEEEEehHH
Confidence 99 8888887 57777777776676776 566666655
No 81
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=93.89 E-value=2.5 Score=35.88 Aligned_cols=143 Identities=15% Similarity=0.128 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHh-cCCCeEeee-CCc-------ccHHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCCe-EEEeCCCCC
Q 027740 3 EGLKILEKVKIA-YDIPIVTDV-HET-------VQCEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGKI-INIKKGQFC 70 (219)
Q Consensus 3 ~gl~~L~~~~~~-~Gi~~~tt~-~d~-------~~~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gkP-VilstG~~~ 70 (219)
.+++.+++.++. ..+|++--. +++ ..++.+.+. +|.+-++..... -..+++.+-+.|.. +.+-+...
T Consensus 80 ~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t- 158 (268)
T 1qop_A 80 QCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNA- 158 (268)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTC-
T ss_pred HHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCC-
Confidence 456788888888 688885422 232 334444444 676666654443 46777888888865 55555544
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCCC--CCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYND--LIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~-~~~~--~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
+.+.+...++. +. ..+++-...-| +... ..-.+.-+..+|+ .++||.++.-=+ .
T Consensus 159 ~~~~i~~i~~~----~~-g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~-----------------t 216 (268)
T 1qop_A 159 DDDLLRQVASY----GR-GYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGIS-----------------S 216 (268)
T ss_dssp CHHHHHHHHHH----CC-SCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCC-----------------S
T ss_pred CHHHHHHHHhh----CC-CcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCC-----------------C
Confidence 56655554432 22 23333322212 2211 1112466778888 789998742211 1
Q ss_pred CcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 147 LRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 147 ~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+..+..++..||||+++=+.++
T Consensus 217 -----~e~~~~~~~agAD~vVVGSai~ 238 (268)
T 1qop_A 217 -----PEQVSAAVRAGAAGAISGSAIV 238 (268)
T ss_dssp -----HHHHHHHHHTTCSEEEECHHHH
T ss_pred -----HHHHHHHHHcCCCEEEEChHHh
Confidence 3445566899999999876653
No 82
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.84 E-value=0.42 Score=40.14 Aligned_cols=103 Identities=11% Similarity=0.063 Sum_probs=75.0
Q ss_pred hHHHHHHHHHHhcC-CCeEe-eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHH
Q 027740 3 EGLKILEKVKIAYD-IPIVT-DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 3 ~gl~~L~~~~~~~G-i~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~ 79 (219)
.+++.+++.++++. +.+-. ++++.++++...+. .|++-.|. .+.+.++.+-+.|.|+++ |.. |++|+..|.
T Consensus 54 ~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~---~d~~v~~~ar~~g~~~i~--Gv~-t~~e~~~A~ 127 (224)
T 1vhc_A 54 AAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG---LNPKIVKLCQDLNFPITP--GVN-NPMAIEIAL 127 (224)
T ss_dssp THHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS---CCHHHHHHHHHTTCCEEC--EEC-SHHHHHHHH
T ss_pred hHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECC---CCHHHHHHHHHhCCCEEe--ccC-CHHHHHHHH
Confidence 35677888888874 43333 68889999998888 99997774 568888888889999988 665 999998875
Q ss_pred HHHHHcCCCcEEEEeecCCCCCCCCCc-cchhHHHHHh-c-CCCEEE
Q 027740 80 EKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNLEWMRE-A-NCPVVA 123 (219)
Q Consensus 80 e~i~~~Gn~~i~L~~cgs~~~~~~~~~-nl~~i~~lk~-~-~~pV~~ 123 (219)
+.|..-+.+ ||.+ .+ -+..+..++. + ++|++.
T Consensus 128 ----~~Gad~vk~------Fpa~--~~gG~~~lk~l~~~~~~ipvva 162 (224)
T 1vhc_A 128 ----EMGISAVKF------FPAE--ASGGVKMIKALLGPYAQLQIMP 162 (224)
T ss_dssp ----HTTCCEEEE------TTTT--TTTHHHHHHHHHTTTTTCEEEE
T ss_pred ----HCCCCEEEE------eeCc--cccCHHHHHHHHhhCCCCeEEE
Confidence 468766655 5422 12 3566777777 6 788854
No 83
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=93.82 E-value=0.24 Score=45.62 Aligned_cols=115 Identities=11% Similarity=0.026 Sum_probs=75.4
Q ss_pred CCe-EEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-----------CC---CCCCccchhHHHHHh-c--CCC
Q 027740 59 GKI-INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-----------GY---NDLIVDPRNLEWMRE-A--NCP 120 (219)
Q Consensus 59 gkP-VilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~-----------~~---~~~~~nl~~i~~lk~-~--~~p 120 (219)
.+| |++|-....+.+++...++.+.+.|..-|++.-++... ++ +.....++.+..+++ . .+|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 689 99999998888899999999999998777665544320 00 001123466777776 5 699
Q ss_pred EEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 121 V~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
|+.+.. .+. ..-+..++.+||++++|=+-+- -+ .|.-++++.+.+++.
T Consensus 348 IIg~GG--------------------I~s--~eDa~e~l~aGAd~VqIgra~l-----~~-----GP~~~~~i~~~L~~~ 395 (415)
T 3i65_A 348 IIASGG--------------------IFS--GLDALEKIEAGASVCQLYSCLV-----FN-----GMKSAVQIKRELNHL 395 (415)
T ss_dssp EEECSS--------------------CCS--HHHHHHHHHHTEEEEEESHHHH-----HH-----GGGHHHHHHHHHHHH
T ss_pred EEEECC--------------------CCC--HHHHHHHHHcCCCEEEEcHHHH-----hc-----CHHHHHHHHHHHHHH
Confidence 987432 211 3456677889999877754321 01 255777888877766
Q ss_pred HHHhC
Q 027740 201 AKVSK 205 (219)
Q Consensus 201 ~~~lg 205 (219)
-+..|
T Consensus 396 l~~~G 400 (415)
T 3i65_A 396 LYQRG 400 (415)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 55555
No 84
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=93.80 E-value=1.4 Score=40.97 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=79.7
Q ss_pred HHHhhh-cccccc--CCCCCCCH-HHHHHHHhcCCeEE--Ee--CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCC
Q 027740 30 EEVGKV-ADIIQI--PAFLCRQT-DLLVAAAKTGKIIN--IK--KGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGY 101 (219)
Q Consensus 30 ~~l~~~-vd~~kI--~S~~~~n~-~LL~~~a~~gkPVi--ls--tG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~ 101 (219)
+.+.+. +|.+-| +..++.|. +.++++-+.|+.|. ++ -|.-.+++.+...++.+.+.|...|.||.-... ..
T Consensus 107 ~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~-~~ 185 (464)
T 2nx9_A 107 ERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGI-LT 185 (464)
T ss_dssp HHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSC-CC
T ss_pred HHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC-cC
Confidence 344444 554443 33344553 56677777899884 32 243448899999999999999988888876543 12
Q ss_pred CCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCC
Q 027740 102 NDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDP 174 (219)
Q Consensus 102 ~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~ 174 (219)
|. ++ .+-+..+++ +++|+++ +.|-. .| +...-+++|+.+||+ .|+.-..+
T Consensus 186 P~-~v-~~lv~~l~~~~~~~i~~-H~Hnd---------------~G---lAvAN~laAv~AGa~--~VD~ti~g 236 (464)
T 2nx9_A 186 PY-AA-EELVSTLKKQVDVELHL-HCHST---------------AG---LADMTLLKAIEAGVD--RVDTAISS 236 (464)
T ss_dssp HH-HH-HHHHHHHHHHCCSCEEE-EECCT---------------TS---CHHHHHHHHHHTTCS--EEEEBCGG
T ss_pred HH-HH-HHHHHHHHHhcCCeEEE-EECCC---------------CC---hHHHHHHHHHHhCCC--EEEEeccc
Confidence 22 12 244566777 8999999 88863 24 225567899999999 88876653
No 85
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=93.73 E-value=0.18 Score=44.27 Aligned_cols=76 Identities=12% Similarity=0.052 Sum_probs=61.3
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
...+++++++|++.. .+.+.+ ++- +|++-|+..+-...++..++.+.||+|++.+.++.+++|....++..+
T Consensus 64 ~~~~~~a~~~g~~~~------~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~ 137 (350)
T 3rc1_A 64 DRAKRFTERFGGEPV------EGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVAR 137 (350)
T ss_dssp HHHHHHHHHHCSEEE------ESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCc------CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHH
Confidence 345667788888764 244444 343 899999999999999999999999999999999999999998888776
Q ss_pred HcCC
Q 027740 84 LAGN 87 (219)
Q Consensus 84 ~~Gn 87 (219)
+.|.
T Consensus 138 ~~g~ 141 (350)
T 3rc1_A 138 ERGL 141 (350)
T ss_dssp HTTC
T ss_pred HhCC
Confidence 6553
No 86
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.72 E-value=0.61 Score=42.10 Aligned_cols=121 Identities=18% Similarity=0.108 Sum_probs=70.3
Q ss_pred CCcccHHHHhhh-ccccccCCCCCCC---HHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEE-----
Q 027740 24 HETVQCEEVGKV-ADIIQIPAFLCRQ---TDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMV----- 92 (219)
Q Consensus 24 ~d~~~~~~l~~~-vd~~kI~S~~~~n---~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L----- 92 (219)
...+.++.+.+. +|++-|-+..-.. .+.++++.+. +.||+..+. .|.++.+.+.+ .|..-|.+
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v--~t~e~A~~a~~----aGAD~I~vG~gpG 181 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV--ATAEGARALIE----AGVSAVKVGIGPG 181 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEE--CSHHHHHHHHH----HTCSEEEECSSCS
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeee--CCHHHHHHHHH----cCCCEEEEecCCC
Confidence 345666666666 8888873332222 3456666665 789888544 36888776543 57755544
Q ss_pred EeecCCC--CCCCCCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEE
Q 027740 93 CERGTMF--GYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGV 166 (219)
Q Consensus 93 ~~cgs~~--~~~~~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~Gl 166 (219)
-+|++.. +.. ..++.++..+++ .++||+.+ +|.+. ..-...|.++||+|+
T Consensus 182 s~~~tr~~~g~g--~p~~~~l~~v~~~~~~~~iPVIA~--------------------GGI~~--~~di~kala~GAd~V 237 (366)
T 4fo4_A 182 SICTTRIVTGVG--VPQITAIADAAGVANEYGIPVIAD--------------------GGIRF--SGDISKAIAAGASCV 237 (366)
T ss_dssp TTBCHHHHHCCC--CCHHHHHHHHHHHHGGGTCCEEEE--------------------SCCCS--HHHHHHHHHTTCSEE
T ss_pred CCCCcccccCcc--cchHHHHHHHHHHHhhcCCeEEEe--------------------CCCCC--HHHHHHHHHcCCCEE
Confidence 1333321 111 124455555542 58999875 23221 233458899999999
Q ss_pred EEeeecCC
Q 027740 167 FMEVHDDP 174 (219)
Q Consensus 167 vIEkH~t~ 174 (219)
++=+-|.-
T Consensus 238 ~vGs~f~~ 245 (366)
T 4fo4_A 238 MVGSMFAG 245 (366)
T ss_dssp EESTTTTT
T ss_pred EEChHhhc
Confidence 98766543
No 87
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=93.69 E-value=0.3 Score=40.20 Aligned_cols=140 Identities=14% Similarity=0.147 Sum_probs=79.4
Q ss_pred HHHHHHHHHHhcCCCeEe--eeCCcc-cHHHHhhh-ccccccCCC--CCCC-HHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVT--DVHETV-QCEEVGKV-ADIIQIPAF--LCRQ-TDLLVAAAKTGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t--t~~d~~-~~~~l~~~-vd~~kI~S~--~~~n-~~LL~~~a~~gkPVilstG~~~t~~ei~ 76 (219)
|++.+++.++..+.++.. -+.++. .++.+.+. +|++.+... .... ..+++++.+.|+.+++..-.+ |..|..
T Consensus 56 ~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~-t~~e~~ 134 (230)
T 1rpx_A 56 GPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPG-TPLTAI 134 (230)
T ss_dssp CHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTT-CCGGGG
T ss_pred CHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCC-CCHHHH
Confidence 456666666655655444 344432 56666666 899988876 4433 456777777788888887655 555544
Q ss_pred HHHHHHHHcCCCcEEEEeecCCCCCCCCCcc---chhHHHHHh-c-----CCCEEEcCCCCCCCCCCCccCCCCccCCCC
Q 027740 77 NSAEKVRLAGNPNVMVCERGTMFGYNDLIVD---PRNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGGL 147 (219)
Q Consensus 77 ~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~n---l~~i~~lk~-~-----~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~ 147 (219)
.+. . .+. +.+++-.... ++.....+ +..+..+|+ . ++|+..+ +|.
T Consensus 135 ~~~---~-~~~-d~vl~~~~~p-g~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~--------------------GGI 188 (230)
T 1rpx_A 135 EYV---L-DAV-DLVLIMSVNP-GFGGQSFIESQVKKISDLRKICAERGLNPWIEVD--------------------GGV 188 (230)
T ss_dssp TTT---T-TTC-SEEEEESSCT-TCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEE--------------------SSC
T ss_pred HHH---H-hhC-CEEEEEEEcC-CCCCccccHHHHHHHHHHHHHHHhcCCCceEEEE--------------------CCC
Confidence 332 1 233 4555444321 22211222 344455665 4 7888774 232
Q ss_pred cccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 148 RELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 148 ~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+ +.-+..+.+.||+|+++=+-++
T Consensus 189 ~---~~n~~~~~~aGad~vvvgSaI~ 211 (230)
T 1rpx_A 189 G---PKNAYKVIEAGANALVAGSAVF 211 (230)
T ss_dssp C---TTTHHHHHHHTCCEEEESHHHH
T ss_pred C---HHHHHHHHHcCCCEEEEChhhh
Confidence 2 1122346777999999876644
No 88
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.63 E-value=0.42 Score=42.14 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=60.5
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..+++++++|++-.. .+.+.+ ++- +|++-|++..-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 58 ~a~~~a~~~~~~~~~-----~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~ 132 (383)
T 3oqb_A 58 KVEALAKRFNIARWT-----TDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANS 132 (383)
T ss_dssp HHHHHHHHTTCCCEE-----SCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCccc-----CCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHH
Confidence 456778889986222 244444 443 8999999999999999999999999999999999999999888887666
Q ss_pred cCC
Q 027740 85 AGN 87 (219)
Q Consensus 85 ~Gn 87 (219)
.|.
T Consensus 133 ~~~ 135 (383)
T 3oqb_A 133 KGV 135 (383)
T ss_dssp TTC
T ss_pred cCC
Confidence 553
No 89
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=93.62 E-value=0.79 Score=40.74 Aligned_cols=138 Identities=17% Similarity=0.202 Sum_probs=89.4
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 85 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~ 85 (219)
.|++..++-+..++-++||..+...+++. +|.+.+++.-+.+ ...|.| .++.- |++|+...++.|...
T Consensus 30 ~lr~l~~~~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~-------~~lG~p---D~~~v-t~~em~~~~~~I~r~ 98 (318)
T 1zlp_A 30 TMHRLIEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSA-------AMLGLP---DFGLL-TTTEVVEATRRITAA 98 (318)
T ss_dssp HHHHHHHHSSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHH-------HHHCCC---SSSCS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhh-------HhcCCC---CCCCC-CHHHHHHHHHHHHhh
Confidence 46666667778888899999999999998 9999999864432 235777 55666 999999888777542
Q ss_pred CCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcE
Q 027740 86 GNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 165 (219)
Q Consensus 86 Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~G 165 (219)
. .++||+.|-+..- |...-+...++..+..||.|
T Consensus 99 -~-----------------------------~~~PviaD~d~Gy----------------g~~~~v~~tv~~l~~aGaag 132 (318)
T 1zlp_A 99 -A-----------------------------PNLCVVVDGDTGG----------------GGPLNVQRFIRELISAGAKG 132 (318)
T ss_dssp -S-----------------------------SSSEEEEECTTCS----------------SSHHHHHHHHHHHHHTTCCE
T ss_pred -c-----------------------------cCCCEEEeCCCCC----------------CCHHHHHHHHHHHHHcCCcE
Confidence 0 0578888877653 22222334455567799999
Q ss_pred EEEeeecCCCCCC-CCCCCCCChHHHHHHHHHHHHHHHHh
Q 027740 166 VFMEVHDDPLNAP-VDGPTQWPLRNLEELLEELVAIAKVS 204 (219)
Q Consensus 166 lvIEkH~t~d~a~-~D~~~sl~p~el~~lv~~ir~i~~~l 204 (219)
+-||--..|.+-- -.++.-.+.++ +++.|+.+..+.
T Consensus 133 v~iED~~~~k~cgH~~gk~L~p~~e---~~~rI~Aa~~A~ 169 (318)
T 1zlp_A 133 VFLEDQVWPKKCGHMRGKAVVPAEE---HALKIAAAREAI 169 (318)
T ss_dssp EEEECBCSSCCCSSSSCCCBCCHHH---HHHHHHHHHHHH
T ss_pred EEECCCCCCccccCCCCCccCCHHH---HHHHHHHHHHhc
Confidence 9999765443321 12222233444 455555555544
No 90
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=93.53 E-value=0.25 Score=42.23 Aligned_cols=76 Identities=16% Similarity=0.021 Sum_probs=60.5
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 85 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~ 85 (219)
...+++++++|++. ..+.+.+.+-+|++-|+...-...++..++.+.||+|++.+.++.+++|....++..++.
T Consensus 43 ~~~~~~a~~~~~~~------~~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~ 116 (308)
T 3uuw_A 43 VKREKICSDYRIMP------FDSIESLAKKCDCIFLHSSTETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKK 116 (308)
T ss_dssp HHHHHHHHHHTCCB------CSCHHHHHTTCSEEEECCCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCC------cCCHHHHHhcCCEEEEeCCcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHc
Confidence 34566778888875 234454444689999999999999999999999999999999999999999888876665
Q ss_pred CC
Q 027740 86 GN 87 (219)
Q Consensus 86 Gn 87 (219)
|.
T Consensus 117 g~ 118 (308)
T 3uuw_A 117 NL 118 (308)
T ss_dssp TC
T ss_pred CC
Confidence 53
No 91
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=93.49 E-value=0.57 Score=42.13 Aligned_cols=129 Identities=16% Similarity=0.065 Sum_probs=74.6
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEE
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVA 123 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ 123 (219)
..+.++++-+ +++||++|- .. +.++...+ .+.|..-|++--.|..- .+....++..++.+++ . ++||+.
T Consensus 217 ~~~~i~~lr~~~~~PvivK~-v~-~~e~a~~a----~~~Gad~I~vs~~ggr~-~~~g~~~~~~l~~v~~~v~~~ipVia 289 (368)
T 2nli_A 217 SPRDIEEIAGHSGLPVFVKG-IQ-HPEDADMA----IKRGASGIWVSNHGARQ-LYEAPGSFDTLPAIAERVNKRVPIVF 289 (368)
T ss_dssp CHHHHHHHHHHSSSCEEEEE-EC-SHHHHHHH----HHTTCSEEEECCGGGTS-CSSCCCHHHHHHHHHHHHTTSSCEEE
T ss_pred hHHHHHHHHHHcCCCEEEEc-CC-CHHHHHHH----HHcCCCEEEEcCCCcCC-CCCCCChHHHHHHHHHHhCCCCeEEE
Confidence 3555777766 689999994 33 77776544 45787656554333221 1111236677888876 4 699998
Q ss_pred cCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 027740 124 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 203 (219)
Q Consensus 124 ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~ 203 (219)
|..=. . ..-+..|.++||++++|=.-+--..+ ..+.. ---+.++.+.++++..-..
T Consensus 290 ~GGI~--------------------~--g~D~~kalalGAd~V~iGr~~l~~~~-~~G~~-gv~~~l~~l~~el~~~m~~ 345 (368)
T 2nli_A 290 DSGVR--------------------R--GEHVAKALASGADVVALGRPVLFGLA-LGGWQ-GAYSVLDYFQKDLTRVMQL 345 (368)
T ss_dssp CSSCC--------------------S--HHHHHHHHHTTCSEEEECHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred ECCCC--------------------C--HHHHHHHHHcCCCEEEECHHHHHHHH-hcChH-HHHHHHHHHHHHHHHHHHH
Confidence 64322 1 23455778899999998764311000 01100 0013466677777777777
Q ss_pred hCCC
Q 027740 204 SKGK 207 (219)
Q Consensus 204 lg~~ 207 (219)
.|..
T Consensus 346 ~G~~ 349 (368)
T 2nli_A 346 TGSQ 349 (368)
T ss_dssp HTCS
T ss_pred hCCc
Confidence 7753
No 92
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.47 E-value=3.4 Score=35.80 Aligned_cols=134 Identities=16% Similarity=0.138 Sum_probs=82.4
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 85 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~ 85 (219)
.|++..++ + .++-++||..+...+++. ++.+.++|.-+.+ ..|.| .++.- |++|+...++.|...
T Consensus 9 ~lr~l~~~-~-i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~--------~~G~p---D~~~v-t~~em~~~~~~I~~~ 74 (275)
T 2ze3_A 9 SFHALHQT-G-FLLPNAWDVASARLLEAAGFTAIGTTSAGIAH--------ARGRT---DGQTL-TRDEMGREVEAIVRA 74 (275)
T ss_dssp HHHHHHHH-C-EEECEESSHHHHHHHHHHTCSCEEECHHHHHH--------HSCCC---SSSSS-CHHHHHHHHHHHHHH
T ss_pred HHHHHhhC-C-eeEecccCHHHHHHHHHcCCCEEEECcHHHHH--------hCCCC---CCCCC-CHHHHHHHHHHHHhh
Confidence 45555554 6 778899999999999988 9999988754332 25766 45666 899988887776532
Q ss_pred CCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcE
Q 027740 86 GNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 165 (219)
Q Consensus 86 Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~G 165 (219)
.++||+.|-+..- ++...-+...++..+..||.|
T Consensus 75 -------------------------------~~~pviaD~d~Gy---------------g~~~~~~~~~v~~l~~aGaag 108 (275)
T 2ze3_A 75 -------------------------------VAIPVNADIEAGY---------------GHAPEDVRRTVEHFAALGVAG 108 (275)
T ss_dssp -------------------------------CSSCEEEECTTCS---------------SSSHHHHHHHHHHHHHTTCSE
T ss_pred -------------------------------cCCCEEeecCCCC---------------CCCHHHHHHHHHHHHHcCCcE
Confidence 2357777766542 111222233344556678888
Q ss_pred EEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhC
Q 027740 166 VFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSK 205 (219)
Q Consensus 166 lvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg 205 (219)
+-||--..+ .++.-.+.+++.+-++.++......|
T Consensus 109 v~iED~~~~-----~~k~l~~~~e~~~~I~aa~~a~~~~g 143 (275)
T 2ze3_A 109 VNLEDATGL-----TPTELYDLDSQLRRIEAARAAIDASG 143 (275)
T ss_dssp EEEECBCSS-----SSSCBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCCcCC-----CCCccCCHHHHHHHHHHHHHhHhhcC
Confidence 888854221 23444556666555555555544333
No 93
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=93.44 E-value=0.26 Score=42.78 Aligned_cols=76 Identities=13% Similarity=0.107 Sum_probs=60.7
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
...+++++++|++-.. .+.+.+ ++- +|++-|++-+-.+.++..++.+.||+|++.+.++.+++|....++..+
T Consensus 40 ~~a~~~a~~~~~~~~~-----~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~ 114 (334)
T 3ohs_X 40 SRAKEFAQKHDIPKAY-----GSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEAR 114 (334)
T ss_dssp HHHHHHHHHHTCSCEE-----SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccc-----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 4566778889986321 244444 443 999999999999999999999999999999999999999998888766
Q ss_pred HcC
Q 027740 84 LAG 86 (219)
Q Consensus 84 ~~G 86 (219)
+.|
T Consensus 115 ~~~ 117 (334)
T 3ohs_X 115 SRG 117 (334)
T ss_dssp HTT
T ss_pred HhC
Confidence 554
No 94
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=93.33 E-value=1.1 Score=36.64 Aligned_cols=111 Identities=14% Similarity=0.042 Sum_probs=67.2
Q ss_pred ccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC--
Q 027740 27 VQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND-- 103 (219)
Q Consensus 27 ~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~-- 103 (219)
+.++.+.+. +|.+.++..+. ....++.... ++.+.++.. |.+|+..+. ..|.. .+++... |+...
T Consensus 79 ~~~~~a~~~gad~v~l~~~~~-~~~~~~~~~~-~~~ig~sv~---t~~~~~~a~----~~gaD-~i~~~~~--f~~~~~~ 146 (221)
T 1yad_A 79 GRVDIALFSTIHRVQLPSGSF-SPKQIRARFP-HLHIGRSVH---SLEEAVQAE----KEDAD-YVLFGHV--FETDCKK 146 (221)
T ss_dssp SCHHHHHTTTCCEEEECTTSC-CHHHHHHHCT-TCEEEEEEC---SHHHHHHHH----HTTCS-EEEEECC--C------
T ss_pred ChHHHHHHcCCCEEEeCCCcc-CHHHHHHHCC-CCEEEEEcC---CHHHHHHHH----hCCCC-EEEECCc--cccCCCC
Confidence 467888888 99999987754 3344555443 777777653 788876554 35654 4455332 21110
Q ss_pred --CCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 104 --LIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 104 --~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
...++..+..+++ .++||+.+. |.. ..-...+.+.||+|+.+=+-+
T Consensus 147 g~~~~~~~~l~~~~~~~~~pvia~G--------------------GI~---~~nv~~~~~~Ga~gv~vgs~i 195 (221)
T 1yad_A 147 GLEGRGVSLLSDIKQRISIPVIAIG--------------------GMT---PDRLRDVKQAGADGIAVMSGI 195 (221)
T ss_dssp ----CHHHHHHHHHHHCCSCEEEES--------------------SCC---GGGHHHHHHTTCSEEEESHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEEC--------------------CCC---HHHHHHHHHcCCCEEEEhHHh
Confidence 1246677777776 789998742 221 122345667899998886654
No 95
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=93.21 E-value=0.26 Score=43.98 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=62.8
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
...+++++++|++-.. .+.+. |++- +|++-|++-+-.+.++..++.+.||+|++.+.++.|++|.+..++..+
T Consensus 70 ~~a~~~a~~~~~~~~y-----~d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~ 144 (412)
T 4gqa_A 70 AMAERHAAKLGAEKAY-----GDWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAAR 144 (412)
T ss_dssp HHHHHHHHHHTCSEEE-----SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEE-----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHH
Confidence 3467788899987322 23444 4544 999999999999999999999999999999999999999999888777
Q ss_pred HcCC
Q 027740 84 LAGN 87 (219)
Q Consensus 84 ~~Gn 87 (219)
+.|.
T Consensus 145 ~~g~ 148 (412)
T 4gqa_A 145 RAGV 148 (412)
T ss_dssp HHTC
T ss_pred HhCC
Confidence 6654
No 96
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=93.21 E-value=0.62 Score=41.79 Aligned_cols=134 Identities=15% Similarity=0.091 Sum_probs=70.5
Q ss_pred HHHHHhcCCCeEeeeCCccc---HHHHhhh-ccccccCCCC---------CCCHHHHHHHHhcCCeEEEeCCCCCCHHHH
Q 027740 9 EKVKIAYDIPIVTDVHETVQ---CEEVGKV-ADIIQIPAFL---------CRQTDLLVAAAKTGKIINIKKGQFCASSVM 75 (219)
Q Consensus 9 ~~~~~~~Gi~~~tt~~d~~~---~~~l~~~-vd~~kI~S~~---------~~n~~LL~~~a~~gkPVilstG~~~t~~ei 75 (219)
.+.+++.|++++..+.-... ++.+.+. +|++.+.... ....++.+....++.||+++ |.. |.++.
T Consensus 148 i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~g-gi~-t~e~a 225 (393)
T 2qr6_A 148 IAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAG-GVN-DYTTA 225 (393)
T ss_dssp HHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEE-CCC-SHHHH
T ss_pred HHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEEC-CcC-CHHHH
Confidence 34445568888775442222 2333333 6665543111 12233334444579999994 444 78886
Q ss_pred HHHHHHHHHcCCCcEEEEe--ecCCC--CCCCCCccchhHHHHHh--------cC---CCEEEcCCCCCCCCCCCccCCC
Q 027740 76 VNSAEKVRLAGNPNVMVCE--RGTMF--GYNDLIVDPRNLEWMRE--------AN---CPVVADVTHSLQQPAGKKLDGG 140 (219)
Q Consensus 76 ~~A~e~i~~~Gn~~i~L~~--cgs~~--~~~~~~~nl~~i~~lk~--------~~---~pV~~ds~Hs~~~~~~~~~~~~ 140 (219)
..+. +.|..-|++-- |+..+ ++. ...+..+..+++ .+ +||+.|.
T Consensus 226 ~~~~----~~Gad~i~vg~Gg~~~~~~~~~g--~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~G--------------- 284 (393)
T 2qr6_A 226 LHMM----RTGAVGIIVGGGENTNSLALGME--VSMATAIADVAAARRDYLDETGGRYVHIIADG--------------- 284 (393)
T ss_dssp HHHH----TTTCSEEEESCCSCCHHHHTSCC--CCHHHHHHHHHHHHHHHHHHHTSCCCEEEECS---------------
T ss_pred HHHH----HcCCCEEEECCCcccccccCCCC--CChHHHHHHHHHHHHHhHhhcCCcceEEEEEC---------------
Confidence 5544 47887666632 11111 111 124555544432 23 8998852
Q ss_pred CccCCCCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 141 GVASGGLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 141 ~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
|.+. ..-...|.++||++++|=+-|
T Consensus 285 -----GI~~--~~dv~kalalGA~~V~iG~~~ 309 (393)
T 2qr6_A 285 -----SIEN--SGDVVKAIACGADAVVLGSPL 309 (393)
T ss_dssp -----SCCS--HHHHHHHHHHTCSEEEECGGG
T ss_pred -----CCCC--HHHHHHHHHcCCCEEEECHHH
Confidence 2221 233457788999999998775
No 97
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=93.19 E-value=1.9 Score=40.91 Aligned_cols=122 Identities=15% Similarity=0.140 Sum_probs=79.9
Q ss_pred HHHHhhh-cccccc--CCCCCCCH-HHHHHHHhcCCeE--EEeC--CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC
Q 027740 29 CEEVGKV-ADIIQI--PAFLCRQT-DLLVAAAKTGKII--NIKK--GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG 100 (219)
Q Consensus 29 ~~~l~~~-vd~~kI--~S~~~~n~-~LL~~~a~~gkPV--ilst--G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~ 100 (219)
++.+.+. ++.+-| +..++.|. +.++++-+.|+.| .++. |.-.+++.+...++.+.+.|...|.||.-... .
T Consensus 123 ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~-~ 201 (539)
T 1rqb_A 123 VDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAAL-L 201 (539)
T ss_dssp HHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCC-C
T ss_pred HHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCC-c
Confidence 3444444 554333 33344553 6667777789887 4643 44448899999999999999987878775442 1
Q ss_pred CCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCC
Q 027740 101 YNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDP 174 (219)
Q Consensus 101 ~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~ 174 (219)
.|. .+ ..-+..+++ + ++||++ +.|-. .| +...-+++|+.+||+ .|+.-..+
T Consensus 202 ~P~-~v-~~lv~~l~~~~p~~i~I~~-H~Hnd---------------~G---lAvAN~laAveAGa~--~VD~ti~g 255 (539)
T 1rqb_A 202 KPQ-PA-YDIIKAIKDTYGQKTQINL-HCHST---------------TG---VTEVSLMKAIEAGVD--VVDTAISS 255 (539)
T ss_dssp CHH-HH-HHHHHHHHHHHCTTCCEEE-EEBCT---------------TS---CHHHHHHHHHHTTCS--EEEEBCGG
T ss_pred CHH-HH-HHHHHHHHHhcCCCceEEE-EeCCC---------------CC---hHHHHHHHHHHhCCC--EEEEeccc
Confidence 222 12 244666777 6 799999 88863 23 225568899999999 88876654
No 98
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=93.18 E-value=0.29 Score=46.15 Aligned_cols=106 Identities=9% Similarity=0.100 Sum_probs=70.7
Q ss_pred CHHHHHHHHhcC-CeEEEeC-----CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCC
Q 027740 48 QTDLLVAAAKTG-KIINIKK-----GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCP 120 (219)
Q Consensus 48 n~~LL~~~a~~g-kPVilst-----G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~p 120 (219)
+...++.+--.| +||.+.. ....+++.++.+++.. |...+.++.-+++|.++...-|++.|..+-+ +++|
T Consensus 172 HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIp 248 (501)
T 3hl2_A 172 QKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIP 248 (501)
T ss_dssp CHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCe
Confidence 455666665555 4777665 2344788888887643 5455665555554423333358999999877 9999
Q ss_pred EEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeeecC
Q 027740 121 VVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHDD 173 (219)
Q Consensus 121 V~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH~t 173 (219)
+.+|--|.. ...+....+..|..+| ||+++.=.|=+
T Consensus 249 llVDeAhGa-----------------h~~~~~~lp~sA~~~GrAD~vVqS~HK~ 285 (501)
T 3hl2_A 249 HIVNNAYGV-----------------QSSKCMHLIQQGARVGRIDAFVQSLDKN 285 (501)
T ss_dssp EEEECTTCT-----------------TCHHHHHHHHHHHHHSCCCEEEEEHHHH
T ss_pred EEEeCcchh-----------------hhhhhhhhHHHHHhcCCCcEEEeccccc
Confidence 999988863 2334456677899999 99777666644
No 99
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=93.14 E-value=0.29 Score=43.69 Aligned_cols=79 Identities=9% Similarity=-0.076 Sum_probs=61.0
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHH-hh------hccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEV-GK------VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~------~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A 78 (219)
...++.++++|++-. .. ..+.+.+ ++ -+|++-|.+-+-.+.++..++.+.||+|++.+.++.|++|....
T Consensus 52 ~~a~~~a~~~g~~~~-~~--~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l 128 (398)
T 3dty_A 52 IRGSAFGEQLGVDSE-RC--YADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENL 128 (398)
T ss_dssp HHHHHHHHHTTCCGG-GB--CSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHH
T ss_pred HHHHHHHHHhCCCcc-ee--eCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHH
Confidence 345677888898510 01 1244444 32 28999999999999999999999999999999999999999998
Q ss_pred HHHHHHcCC
Q 027740 79 AEKVRLAGN 87 (219)
Q Consensus 79 ~e~i~~~Gn 87 (219)
++..++.|.
T Consensus 129 ~~~a~~~g~ 137 (398)
T 3dty_A 129 RELSHKHNR 137 (398)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHcCC
Confidence 887776653
No 100
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=93.06 E-value=0.21 Score=43.28 Aligned_cols=125 Identities=15% Similarity=0.013 Sum_probs=77.7
Q ss_pred HHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcC-CCcEEEEeecC---------C---------C-CCCC---CC
Q 027740 50 DLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAG-NPNVMVCERGT---------M---------F-GYND---LI 105 (219)
Q Consensus 50 ~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~G-n~~i~L~~cgs---------~---------~-~~~~---~~ 105 (219)
++++++-+ +++||++|.....+.+++...++.+.+.| ..-|++..++. . + ++.. ..
T Consensus 150 ~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p 229 (314)
T 2e6f_A 150 TYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILP 229 (314)
T ss_dssp HHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHH
T ss_pred HHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccH
Confidence 45666655 38999999887778899999899998888 65444332220 0 0 0000 01
Q ss_pred ccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCC
Q 027740 106 VDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPT 183 (219)
Q Consensus 106 ~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~ 183 (219)
..+..+..+++ . ++||+... |.+. ..-+..++++|||+++|=+-+--
T Consensus 230 ~~~~~i~~v~~~~~~ipvi~~G--------------------GI~~--~~da~~~l~~GAd~V~ig~~~l~--------- 278 (314)
T 2e6f_A 230 TALANVNAFYRRCPDKLVFGCG--------------------GVYS--GEDAFLHILAGASMVQVGTALQE--------- 278 (314)
T ss_dssp HHHHHHHHHHHHCTTSEEEEES--------------------SCCS--HHHHHHHHHHTCSSEEECHHHHH---------
T ss_pred HHHHHHHHHHHhcCCCCEEEEC--------------------CCCC--HHHHHHHHHcCCCEEEEchhhHh---------
Confidence 23566777777 7 89998742 2221 34456667899998887554221
Q ss_pred CCChHHHHHHHHHHHHHHHHhCC
Q 027740 184 QWPLRNLEELLEELVAIAKVSKG 206 (219)
Q Consensus 184 sl~p~el~~lv~~ir~i~~~lg~ 206 (219)
-+|.-++++.+.++..-...|-
T Consensus 279 -~~p~~~~~i~~~l~~~~~~~g~ 300 (314)
T 2e6f_A 279 -EGPGIFTRLEDELLEIMARKGY 300 (314)
T ss_dssp -HCTTHHHHHHHHHHHHHHHHTC
T ss_pred -cCcHHHHHHHHHHHHHHHHcCC
Confidence 1345677777777766555553
No 101
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.05 E-value=1 Score=37.24 Aligned_cols=141 Identities=12% Similarity=0.094 Sum_probs=78.2
Q ss_pred HHHHHHHHHHhcCCCeEeeeC--Cc-ccHHHHhhh-ccccccCCCCCC-C-HHHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVH--ET-VQCEEVGKV-ADIIQIPAFLCR-Q-TDLLVAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~--d~-~~~~~l~~~-vd~~kI~S~~~~-n-~~LL~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
|++.+++.++....++..-.+ |+ ..++.+.+. +|.+++...... - ...++++-+.|+.++++.... |..|...
T Consensus 52 ~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~-t~~e~~~ 130 (228)
T 1h1y_A 52 GAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPG-TPVEEVF 130 (228)
T ss_dssp CHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTT-SCGGGGH
T ss_pred CHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCC-CCHHHHH
Confidence 455566665544444433222 32 236666667 888877776544 3 567888878899999999777 5544333
Q ss_pred HHHHHHHc--CCCcEEEEeecCCCCCCCCCcc---chhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCccc
Q 027740 78 SAEKVRLA--GNPNVMVCERGTMFGYNDLIVD---PRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLREL 150 (219)
Q Consensus 78 A~e~i~~~--Gn~~i~L~~cgs~~~~~~~~~n---l~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~ 150 (219)
.+... +. +.+++-...- ++.....+ +..+..+|+ . ++||.++ +|...
T Consensus 131 ---~~~~~~~~~-d~vl~~sv~p-g~~g~~~~~~~l~~i~~~~~~~~~~pi~v~--------------------GGI~~- 184 (228)
T 1h1y_A 131 ---PLVEAENPV-ELVLVMTVEP-GFGGQKFMPEMMEKVRALRKKYPSLDIEVD--------------------GGLGP- 184 (228)
T ss_dssp ---HHHHSSSCC-SEEEEESSCT-TCSSCCCCGGGHHHHHHHHHHCTTSEEEEE--------------------SSCST-
T ss_pred ---HHHhcCCCC-CEEEEEeecC-CCCcccCCHHHHHHHHHHHHhcCCCCEEEE--------------------CCcCH-
Confidence 23332 44 4555532210 11111223 445566666 5 8898875 12211
Q ss_pred HHHHHHHHHHcCCcEEEEeeecC
Q 027740 151 IPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 151 ~~~~~~aAvalGA~GlvIEkH~t 173 (219)
.-...+++.||||+++=+-+.
T Consensus 185 --~ni~~~~~aGaD~vvvGsai~ 205 (228)
T 1h1y_A 185 --STIDVAASAGANCIVAGSSIF 205 (228)
T ss_dssp --TTHHHHHHHTCCEEEESHHHH
T ss_pred --HHHHHHHHcCCCEEEECHHHH
Confidence 112244566999988876543
No 102
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=93.01 E-value=0.39 Score=43.32 Aligned_cols=79 Identities=9% Similarity=-0.081 Sum_probs=60.4
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHH-hh-----h-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEV-GK-----V-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~-----~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A 78 (219)
...+++++++|++-. .. ..+.+.+ ++ - +|++-|.+-+-.+.++..++.+.||+|++.+.++.+++|....
T Consensus 77 ~~a~~~a~~~g~~~~-~~--~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l 153 (417)
T 3v5n_A 77 EKAEASGRELGLDPS-RV--YSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKL 153 (417)
T ss_dssp HHHHHHHHHHTCCGG-GB--CSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHH
T ss_pred HHHHHHHHHcCCCcc-cc--cCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHH
Confidence 455677888888510 01 1234444 33 2 8999999999999999999999999999999999999999988
Q ss_pred HHHHHHcCC
Q 027740 79 AEKVRLAGN 87 (219)
Q Consensus 79 ~e~i~~~Gn 87 (219)
++..++.|.
T Consensus 154 ~~~a~~~g~ 162 (417)
T 3v5n_A 154 KKAADESDA 162 (417)
T ss_dssp HHHHHHCSS
T ss_pred HHHHHHcCC
Confidence 887665543
No 103
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=93.01 E-value=2.3 Score=35.73 Aligned_cols=143 Identities=14% Similarity=0.123 Sum_probs=77.4
Q ss_pred hHHHHHHHHHHhcCCCeEeee-CCc---ccHHHHhhh-ccccccCCCCCCC-HHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDV-HET---VQCEEVGKV-ADIIQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~-~d~---~~~~~l~~~-vd~~kI~S~~~~n-~~LL~~~a~~gkPVilstG~~~t~~ei~ 76 (219)
.++..+++.++..++|++--. +++ ..++.+.+. +|.+-++...... ..+++.+.+.|.++++--...-+.+.+.
T Consensus 81 ~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~ 160 (262)
T 1rd5_A 81 AVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMK 160 (262)
T ss_dssp HHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHH
Confidence 356777888777899986521 222 234445566 7766665433333 4667777778877555444441344333
Q ss_pred HHHHHHHHcCCCcEEEEeecCCC-CCCCC--CccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHH
Q 027740 77 NSAEKVRLAGNPNVMVCERGTMF-GYNDL--IVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 152 (219)
Q Consensus 77 ~A~e~i~~~Gn~~i~L~~cgs~~-~~~~~--~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~ 152 (219)
... ..+. .++.+....-| +.... ...+..+..+|+ .++||.++. |.+. +
T Consensus 161 ~~~----~~~~-g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgG--------------------GI~~--~ 213 (262)
T 1rd5_A 161 EIT----KASE-GFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGF--------------------GISK--P 213 (262)
T ss_dssp HHH----HHCC-SCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEES--------------------CCCS--H
T ss_pred HHH----hcCC-CeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEEC--------------------CcCC--H
Confidence 332 2233 34444332111 22111 112345667777 789998742 2211 3
Q ss_pred HHHHHHHHcCCcEEEEeeec
Q 027740 153 CIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 153 ~~~~aAvalGA~GlvIEkH~ 172 (219)
.-+....++||||+++=+-+
T Consensus 214 e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 214 EHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp HHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHcCCCEEEEChHH
Confidence 34456678999999886553
No 104
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=92.90 E-value=0.52 Score=40.88 Aligned_cols=87 Identities=11% Similarity=0.087 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCC----HHHHHHHHh---cCCeEEEeCCCCCCHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQ----TDLLVAAAK---TGKIINIKKGQFCASSV 74 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n----~~LL~~~a~---~gkPVilstG~~~t~~e 74 (219)
+-|+.|.++|+++|+.++.++++++.++...++ .+++-|-.||+.. ...-..++. .+..++-..|.. |.++
T Consensus 140 ~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~-t~~d 218 (258)
T 4a29_A 140 RELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSNVVKVAKLGIS-ERNE 218 (258)
T ss_dssp HHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSC-CHHH
T ss_pred HHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCC-CHHH
Confidence 358899999999999999999999999998888 9999998888763 232333333 367777778888 8888
Q ss_pred HHHHHHHHHHcCCCcEEEEe
Q 027740 75 MVNSAEKVRLAGNPNVMVCE 94 (219)
Q Consensus 75 i~~A~e~i~~~Gn~~i~L~~ 94 (219)
+.. +++.|..-+.+-+
T Consensus 219 v~~----l~~~G~~a~LVGe 234 (258)
T 4a29_A 219 IEE----LRKLGVNAFLISS 234 (258)
T ss_dssp HHH----HHHTTCCEEEECH
T ss_pred HHH----HHHCCCCEEEECH
Confidence 765 4556765554433
No 105
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=92.88 E-value=0.32 Score=43.26 Aligned_cols=75 Identities=23% Similarity=0.240 Sum_probs=60.9
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..++.++++|+++.+ +.+.+ ++- +|++-|..-+-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 40 ~~~~~a~~~g~~~~~------~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~ 113 (387)
T 3moi_A 40 VRERFGKEYGIPVFA------TLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVER 113 (387)
T ss_dssp HHHHHHHHHTCCEES------SHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCeEC------CHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHH
Confidence 456677888988543 34444 443 9999999999999999999999999999999999999999988887766
Q ss_pred cCC
Q 027740 85 AGN 87 (219)
Q Consensus 85 ~Gn 87 (219)
.|.
T Consensus 114 ~g~ 116 (387)
T 3moi_A 114 AGV 116 (387)
T ss_dssp HTC
T ss_pred hCC
Confidence 653
No 106
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=92.87 E-value=0.28 Score=42.81 Aligned_cols=77 Identities=13% Similarity=0.025 Sum_probs=59.7
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
...+++++++|++-.. .+.+. +++- +|++-|++-+-...++..++.+.||+|++.+.++.|++|...-++..+
T Consensus 56 ~~~~~~a~~~~~~~~~-----~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 130 (340)
T 1zh8_A 56 SHAEEFAKMVGNPAVF-----DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSE 130 (340)
T ss_dssp HHHHHHHHHHSSCEEE-----SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCccc-----CCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHH
Confidence 3456677888873211 23444 4444 999999999989999999999999999999999999999988888766
Q ss_pred HcCC
Q 027740 84 LAGN 87 (219)
Q Consensus 84 ~~Gn 87 (219)
+.|.
T Consensus 131 ~~g~ 134 (340)
T 1zh8_A 131 KSEK 134 (340)
T ss_dssp HCSS
T ss_pred HcCC
Confidence 6543
No 107
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=92.83 E-value=0.25 Score=44.42 Aligned_cols=124 Identities=13% Similarity=0.048 Sum_probs=78.8
Q ss_pred HHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcC-CCcEEEE---------e--ecC-------C---C-CCCCCC
Q 027740 50 DLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAG-NPNVMVC---------E--RGT-------M---F-GYNDLI 105 (219)
Q Consensus 50 ~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~G-n~~i~L~---------~--cgs-------~---~-~~~~~~ 105 (219)
++++++-+ +++||.+|.....+.+++..+++.+.+.| ..-|++. + +.+ . | +.+...
T Consensus 183 ~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p 262 (354)
T 4ef8_A 183 QCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLP 262 (354)
T ss_dssp HHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHH
T ss_pred HHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCch
Confidence 44555544 58999999999889999999999888887 5444431 1 111 0 1 111113
Q ss_pred ccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCC
Q 027740 106 VDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPT 183 (219)
Q Consensus 106 ~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~ 183 (219)
++++.+..+++ . ++||+.+.. .+. ..-+..++.+||++++|=.-+-- ++
T Consensus 263 ~a~~~i~~v~~~~~~ipII~~GG--------------------I~s--~~da~~~l~aGAd~V~vgra~l~-----~G-- 313 (354)
T 4ef8_A 263 TALANINAFYRRCPGKLIFGCGG--------------------VYT--GEDAFLHVLAGASMVQVGTALQE-----EG-- 313 (354)
T ss_dssp HHHHHHHHHHHHCTTSEEEEESC--------------------CCS--HHHHHHHHHHTEEEEEECHHHHH-----HC--
T ss_pred HHHHHHHHHHHhCCCCCEEEECC--------------------cCC--HHHHHHHHHcCCCEEEEhHHHHH-----hC--
Confidence 56778888887 5 799987533 221 33455667899998887654321 21
Q ss_pred CCChHHHHHHHHHHHHHHHHhC
Q 027740 184 QWPLRNLEELLEELVAIAKVSK 205 (219)
Q Consensus 184 sl~p~el~~lv~~ir~i~~~lg 205 (219)
|.-++++.+.++..-...|
T Consensus 314 ---P~~~~~i~~~l~~~m~~~G 332 (354)
T 4ef8_A 314 ---PSIFERLTSELLGVMAKKR 332 (354)
T ss_dssp ---TTHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHHcC
Confidence 4567778777776655555
No 108
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=92.80 E-value=0.13 Score=42.52 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHhc-CCCeEee--eCCc--ccHHHHhhh-ccccccCCCCCCC--HHHHHHHHhcCCeEEE-eCCCCCCHH
Q 027740 3 EGLKILEKVKIAY-DIPIVTD--VHET--VQCEEVGKV-ADIIQIPAFLCRQ--TDLLVAAAKTGKIINI-KKGQFCASS 73 (219)
Q Consensus 3 ~gl~~L~~~~~~~-Gi~~~tt--~~d~--~~~~~l~~~-vd~~kI~S~~~~n--~~LL~~~a~~gkPVil-stG~~~t~~ 73 (219)
.|++.+++.++.+ +.+++-+ .++. ..++.+.+. +|++-+....... ..+++.+.+.|+++++ --|.. |.+
T Consensus 45 ~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~-T~~ 123 (218)
T 3jr2_A 45 EGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNW-TMQ 123 (218)
T ss_dssp HTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSC-CHH
T ss_pred cCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecC-CHH
Confidence 5778888887774 6666543 3332 223445555 7887776554322 3566777778887775 45555 877
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh---cCCCEEEcCCCCCCCCCCCccCCCCccCCCCccc
Q 027740 74 VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE---ANCPVVADVTHSLQQPAGKKLDGGGVASGGLREL 150 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~---~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~ 150 (219)
++..+.+ .|-..+.+ +.++.............+..+|+ .++||.++ +|.+
T Consensus 124 ~~~~~~~----~g~d~v~~-~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~--------------------GGI~-- 176 (218)
T 3jr2_A 124 DAKAWVD----LGITQAIY-HRSRDAELAGIGWTTDDLDKMRQLSALGIELSIT--------------------GGIV-- 176 (218)
T ss_dssp HHHHHHH----TTCCEEEE-ECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEE--------------------SSCC--
T ss_pred HHHHHHH----cCccceee-eeccccccCCCcCCHHHHHHHHHHhCCCCCEEEE--------------------CCCC--
Confidence 7666543 36655544 43322111011122344455555 37888875 2322
Q ss_pred HHHHHHHHHHcCCcEEEEeee
Q 027740 151 IPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 151 ~~~~~~aAvalGA~GlvIEkH 171 (219)
+.-+..+++.||||+++=+-
T Consensus 177 -~~~~~~~~~aGAd~vvvGsa 196 (218)
T 3jr2_A 177 -PEDIYLFEGIKTKTFIAGRA 196 (218)
T ss_dssp -GGGGGGGTTSCEEEEEESGG
T ss_pred -HHHHHHHHHcCCCEEEEchh
Confidence 12234578899999888654
No 109
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=92.78 E-value=0.56 Score=44.12 Aligned_cols=126 Identities=18% Similarity=0.072 Sum_probs=72.4
Q ss_pred HHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCCCCCCCCCccchhHHHHHh-c-------C
Q 027740 49 TDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTMFGYNDLIVDPRNLEWMRE-A-------N 118 (219)
Q Consensus 49 ~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~-~cgs~~~~~~~~~nl~~i~~lk~-~-------~ 118 (219)
.+.++++-+ +++||++| |.. +.++.. .+.+.|..-|++- |.|+.. +.....+..++.+++ . +
T Consensus 332 ~~~i~~lr~~~~~PvivK-gv~-~~e~A~----~a~~aGad~I~vs~hgG~~~--d~~~~~~~~l~~v~~~v~~~~~~~~ 403 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIK-GVQ-RTEDVI----KAAEIGVSGVVLSNHGGRQL--DFSRAPIEVLAETMPILEQRNLKDK 403 (511)
T ss_dssp HHHHHHHHHHCSSCEEEE-EEC-SHHHHH----HHHHTTCSEEEECCTTTTSS--TTCCCHHHHHHHHHHHHHTTTCBTT
T ss_pred HHHHHHHHHHhCCcEEEE-eCC-CHHHHH----HHHHcCCCEEEEcCCCCccC--CCCCchHHHHHHHHHHHHhhccCCC
Confidence 566777766 69999999 444 666643 3456787655553 433322 111234666777665 4 6
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHH
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELV 198 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir 198 (219)
+||+.|..=. .| .-+..|+++||++++|=+-+--... ..+... --+-++.+.++++
T Consensus 404 ipVia~GGI~----------------~g------~Dv~kaLalGAdaV~iGr~~l~~~~-~~G~~g-v~~~l~~l~~el~ 459 (511)
T 1kbi_A 404 LEVFVDGGVR----------------RG------TDVLKALCLGAKGVGLGRPFLYANS-CYGRNG-VEKAIEILRDEIE 459 (511)
T ss_dssp BEEEEESSCC----------------SH------HHHHHHHHHTCSEEEECHHHHHHHH-HHHHHH-HHHHHHHHHHHHH
T ss_pred cEEEEECCCC----------------CH------HHHHHHHHcCCCEEEECHHHHHHHH-hcChHH-HHHHHHHHHHHHH
Confidence 8998863322 12 3455778899999998763221000 011000 0124566777777
Q ss_pred HHHHHhCC
Q 027740 199 AIAKVSKG 206 (219)
Q Consensus 199 ~i~~~lg~ 206 (219)
..-...|.
T Consensus 460 ~~m~~~G~ 467 (511)
T 1kbi_A 460 MSMRLLGV 467 (511)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhCC
Confidence 77777776
No 110
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=92.68 E-value=0.26 Score=42.87 Aligned_cols=79 Identities=16% Similarity=0.060 Sum_probs=63.0
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
+.+.+.++++|+.. ..| .+.+.+ ++- +|+.-|++-.-.+.++..++.+.||+|++.+.++.|++|....++..+
T Consensus 40 ~~~~~~~~~~~~~~--~~~--~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 115 (337)
T 3ip3_A 40 SKLEKAISEMNIKP--KKY--NNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQ 115 (337)
T ss_dssp HHHHHHHHTTTCCC--EEC--SSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCC--ccc--CCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHH
Confidence 45667777788742 122 344544 444 999999999999999999999999999999999999999999999888
Q ss_pred HcCCC
Q 027740 84 LAGNP 88 (219)
Q Consensus 84 ~~Gn~ 88 (219)
+.|..
T Consensus 116 ~~g~~ 120 (337)
T 3ip3_A 116 KVRNE 120 (337)
T ss_dssp HHTTT
T ss_pred HhCCc
Confidence 87753
No 111
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=92.68 E-value=0.7 Score=40.53 Aligned_cols=130 Identities=18% Similarity=0.084 Sum_probs=74.6
Q ss_pred HHHHHHHHhcCCeEEEe-CCCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCC-------CC---------CCCCCccchh
Q 027740 49 TDLLVAAAKTGKIINIK-KGQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTM-------FG---------YNDLIVDPRN 110 (219)
Q Consensus 49 ~~LL~~~a~~gkPVils-tG~~~t~~ei~~A~e~i~~~Gn~~i~L~-~cgs~-------~~---------~~~~~~nl~~ 110 (219)
.+.++++-++++||++| .|...++++.. .+.+.|..-|++- |-|++ .. ...-...+..
T Consensus 171 ~~~i~~vr~~~~Pv~vK~v~~g~~~e~a~----~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 246 (332)
T 1vcf_A 171 VERLAELLPLPFPVMVKEVGHGLSREAAL----ALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARA 246 (332)
T ss_dssp HHHHHHHCSCSSCEEEECSSSCCCHHHHH----HHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHH
T ss_pred HHHHHHHHcCCCCEEEEecCCCCCHHHHH----HHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHH
Confidence 45666666678999999 77666888754 4456677555442 32221 00 0001123456
Q ss_pred HHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChH
Q 027740 111 LEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLR 188 (219)
Q Consensus 111 i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~ 188 (219)
+..+++ . ++||+.+..- +. ..-+..++++||++++|=+-+--.. .++.. --.+
T Consensus 247 l~~v~~~~~~ipvia~GGI--------------------~~--~~d~~kal~~GAd~V~igr~~l~~~--~~G~~-gv~~ 301 (332)
T 1vcf_A 247 ILEVREVLPHLPLVASGGV--------------------YT--GTDGAKALALGADLLAVARPLLRPA--LEGAE-RVAA 301 (332)
T ss_dssp HHHHHHHCSSSCEEEESSC--------------------CS--HHHHHHHHHHTCSEEEECGGGHHHH--TTCHH-HHHH
T ss_pred HHHHHHhcCCCeEEEECCC--------------------CC--HHHHHHHHHhCCChHhhhHHHHHHH--hccHH-HHHH
Confidence 667766 6 7999885332 21 3345577889999988876433111 11100 0013
Q ss_pred HHHHHHHHHHHHHHHhCCC
Q 027740 189 NLEELLEELVAIAKVSKGK 207 (219)
Q Consensus 189 el~~lv~~ir~i~~~lg~~ 207 (219)
-++.+.++++..-...|..
T Consensus 302 ~~~~l~~el~~~m~~~G~~ 320 (332)
T 1vcf_A 302 WIGDYLEELRTALFAIGAR 320 (332)
T ss_dssp HHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 4666777888777777764
No 112
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.58 E-value=0.16 Score=47.41 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=71.2
Q ss_pred cccHHHHhhh-ccccccCCCCCCCH---HHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-----e
Q 027740 26 TVQCEEVGKV-ADIIQIPAFLCRQT---DLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-----E 94 (219)
Q Consensus 26 ~~~~~~l~~~-vd~~kI~S~~~~n~---~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~-----~ 94 (219)
.+.++.+.+. +|++.|.+..-.+. ++++++.+. +.||+..+. .|.++... +...|..-|.+- +
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v--~t~e~a~~----l~~aGaD~I~vg~g~Gs~ 304 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNI--ATAEAAKA----LAEAGADAVKVGIGPGSI 304 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEE--CSHHHHHH----HHHTTCSEEEECSSCSTT
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeee--CcHHHHHH----HHHcCCCEEEECCCCCcC
Confidence 3445555555 88888876655443 666777664 689999543 36776544 445787655542 4
Q ss_pred ecCCC--CCCCCCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEE
Q 027740 95 RGTMF--GYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 168 (219)
Q Consensus 95 cgs~~--~~~~~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvI 168 (219)
|++.. +.. ..++.++..+.+ +++||+.|. |.+. ..-...|.++||+|++|
T Consensus 305 ~~t~~~~g~g--~p~~~~l~~v~~~~~~~~iPVIa~G--------------------GI~~--~~di~kal~~GAd~V~v 360 (490)
T 4avf_A 305 CTTRIVAGVG--VPQISAIANVAAALEGTGVPLIADG--------------------GIRF--SGDLAKAMVAGAYCVMM 360 (490)
T ss_dssp CHHHHHTCBC--CCHHHHHHHHHHHHTTTTCCEEEES--------------------CCCS--HHHHHHHHHHTCSEEEE
T ss_pred CCccccCCCC--ccHHHHHHHHHHHhccCCCcEEEeC--------------------CCCC--HHHHHHHHHcCCCeeee
Confidence 44321 111 125566666654 479998752 3221 23345678899999999
Q ss_pred eeecCC
Q 027740 169 EVHDDP 174 (219)
Q Consensus 169 EkH~t~ 174 (219)
=+-|.-
T Consensus 361 Gs~~~~ 366 (490)
T 4avf_A 361 GSMFAG 366 (490)
T ss_dssp CTTTTT
T ss_pred cHHHhc
Confidence 766543
No 113
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=92.38 E-value=2.6 Score=35.48 Aligned_cols=152 Identities=16% Similarity=0.152 Sum_probs=99.0
Q ss_pred HHHHHHHHHhcCCCeEeeeCCccc---------HHHHhhh-ccccccCCCC--CCC---HHHHHHHHhcCCeEEEeCCCC
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQ---------CEEVGKV-ADIIQIPAFL--CRQ---TDLLVAAAKTGKIINIKKGQF 69 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~---------~~~l~~~-vd~~kI~S~~--~~n---~~LL~~~a~~gkPVilstG~~ 69 (219)
+..|..+++..++++..-=.|+.+ +.++.++ +++.-|+-.+ ... -.+++.+-+.|+-+++..|
T Consensus 48 ~~~L~~v~~~~~i~v~aQdv~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg-- 125 (225)
T 1hg3_A 48 LVDLRMIAESVEIPVFAQHIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN-- 125 (225)
T ss_dssp HHHHHHHHHSCSSCBEESCCCSCCSBSCTTCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES--
T ss_pred HHHHHHHHHhcCCceeeeeCCcccCCCccCcccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC--
Confidence 456777777789999997788988 9999999 9999999887 432 3455566678999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC----CCCcc-chhHHH-HHh--cCCCEEEcCCCCCCCCCCCccCCCC
Q 027740 70 CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN----DLIVD-PRNLEW-MRE--ANCPVVADVTHSLQQPAGKKLDGGG 141 (219)
Q Consensus 70 ~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~----~~~~n-l~~i~~-lk~--~~~pV~~ds~Hs~~~~~~~~~~~~~ 141 (219)
+..|...+ ...+ +.++-.+-.-.-++. ..+.+ +..... +|. .+++|+|-++-..
T Consensus 126 -e~~e~~~~----~~~~-~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~------------ 187 (225)
T 1hg3_A 126 -NPAVSAAV----AALN-PDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGIST------------ 187 (225)
T ss_dssp -SHHHHHHH----HTTC-CSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCS------------
T ss_pred -CHHHHHHH----hcCC-CCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCc------------
Confidence 44554333 2223 346666644322222 22334 433333 344 3678887544431
Q ss_pred ccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHH
Q 027740 142 VASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELV 198 (219)
Q Consensus 142 ~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir 198 (219)
..........|+||++| +.+++.+++|.++++++.
T Consensus 188 ----------~n~~~~~~~~~vDG~LV------------G~a~l~a~~~~~~i~~l~ 222 (225)
T 1hg3_A 188 ----------GEDVKKAIELGTVGVLL------------ASGVTKAKDPEKAIWDLV 222 (225)
T ss_dssp ----------HHHHHHHHHTTCSEEEE------------SHHHHTCSSHHHHHHHHH
T ss_pred ----------HHHHHHHHhCCCCEEEe------------CHHHHCCcCHHHHHHHHH
Confidence 34445567789999988 456667777777776654
No 114
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.36 E-value=0.2 Score=46.85 Aligned_cols=118 Identities=17% Similarity=0.064 Sum_probs=71.0
Q ss_pred cccHHHHhhh-ccccccCCCCCCCH---HHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-----e
Q 027740 26 TVQCEEVGKV-ADIIQIPAFLCRQT---DLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-----E 94 (219)
Q Consensus 26 ~~~~~~l~~~-vd~~kI~S~~~~n~---~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~-----~ 94 (219)
.+.++.+.+. +|++.|.+..-.+. ++++++.+. ++||++.+. .+.++...+ .+.|..-|.+- +
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v--~t~e~a~~l----~~aGaD~I~Vg~g~Gs~ 306 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV--ATAEGARAL----IEAGVSAVKVGIGPGSI 306 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEE--CSHHHHHHH----HHHTCSEEEECSSCCTT
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEccc--CcHHHHHHH----HHhCCCEEEECCCCCcC
Confidence 3445555555 88888877655443 667777665 789999544 357765544 44687655543 5
Q ss_pred ecCCC--CCCCCCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEE
Q 027740 95 RGTMF--GYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 168 (219)
Q Consensus 95 cgs~~--~~~~~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvI 168 (219)
|++.. +.. ..++.++..+.+ +++||+.|. |.+. ..-...|.++||+|++|
T Consensus 307 ~~tr~~~g~g--~p~~~~i~~v~~~~~~~~iPVIa~G--------------------GI~~--~~di~kala~GAd~V~i 362 (496)
T 4fxs_A 307 CTTRIVTGVG--VPQITAIADAAGVANEYGIPVIADG--------------------GIRF--SGDISKAIAAGASCVMV 362 (496)
T ss_dssp BCHHHHHCCC--CCHHHHHHHHHHHHGGGTCCEEEES--------------------CCCS--HHHHHHHHHTTCSEEEE
T ss_pred cccccccCCC--ccHHHHHHHHHHHhccCCCeEEEeC--------------------CCCC--HHHHHHHHHcCCCeEEe
Confidence 55421 111 125566665543 589998752 2221 23345678899999999
Q ss_pred eeecC
Q 027740 169 EVHDD 173 (219)
Q Consensus 169 EkH~t 173 (219)
=+-|.
T Consensus 363 Gs~f~ 367 (496)
T 4fxs_A 363 GSMFA 367 (496)
T ss_dssp STTTT
T ss_pred cHHHh
Confidence 76553
No 115
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=92.36 E-value=0.73 Score=41.84 Aligned_cols=129 Identities=19% Similarity=0.079 Sum_probs=73.4
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEE
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVA 123 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ 123 (219)
+.+.++++-+ +++||++| |.. +.++... +.+.|..-|++--.|..- .+....++..++.+++ . ++||+.
T Consensus 240 ~~~~i~~lr~~~~~PvivK-gv~-~~e~A~~----a~~aGad~I~vs~~ggr~-~~~g~~~~~~l~~v~~av~~~ipVia 312 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAK-GIL-RGDDARE----AVKHGLNGILVSNHGARQ-LDGVPATIDVLPEIVEAVEGKVEVFL 312 (392)
T ss_dssp CHHHHHHHC--CCSCEEEE-EEC-CHHHHHH----HHHTTCCEEEECCGGGTS-STTCCCHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHhhCCCEEEE-ecC-CHHHHHH----HHHcCCCEEEeCCCCCCc-CCCCcChHHHHHHHHHHcCCCCEEEE
Confidence 4555666655 68999999 444 7777544 445787666653333211 1111235677777776 3 599988
Q ss_pred cCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 027740 124 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 203 (219)
Q Consensus 124 ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~ 203 (219)
|..=. .| .-...|+++||++++|=+-+--... ..+.. ---+-++.+.++++..-..
T Consensus 313 ~GGI~----------------~g------~Dv~kalalGAd~V~iGr~~l~~~~-~~g~~-gv~~~l~~l~~el~~~m~~ 368 (392)
T 2nzl_A 313 DGGVR----------------KG------TDVLKALALGAKAVFVGRPIVWGLA-FQGEK-GVQDVLEILKEEFRLAMAL 368 (392)
T ss_dssp CSSCC----------------SH------HHHHHHHHTTCSEEEECHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred ECCCC----------------CH------HHHHHHHHhCCCeeEECHHHHHHHH-hcChH-HHHHHHHHHHHHHHHHHHH
Confidence 63322 12 3355778899999998764221000 00000 0013566677778887777
Q ss_pred hCCC
Q 027740 204 SKGK 207 (219)
Q Consensus 204 lg~~ 207 (219)
.|..
T Consensus 369 ~G~~ 372 (392)
T 2nzl_A 369 SGCQ 372 (392)
T ss_dssp HTCS
T ss_pred hCCC
Confidence 7863
No 116
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.32 E-value=1.2 Score=38.02 Aligned_cols=134 Identities=17% Similarity=0.121 Sum_probs=85.6
Q ss_pred HHHHHHHHHHhcCCCeEeee--CCcccHHHHhhh-ccccccCCCCCCCHHHH---HHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDV--HETVQCEEVGKV-ADIIQIPAFLCRQTDLL---VAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~--~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL---~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
.+..|+..++..++|++.-- .|+.+++.+..+ +|.+-+++..+. ..+. ..+-+.|+-+++... +.+|...
T Consensus 94 ~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~---~~~E~~~ 169 (254)
T 1vc4_A 94 SLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLEALVEVH---TERELEI 169 (254)
T ss_dssp CHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEEEEC---SHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCeEEEEEC---CHHHHHH
Confidence 46778888899999976633 566678877777 999888888776 3333 333367988887776 7888876
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-----CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccH
Q 027740 78 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELI 151 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-----~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~ 151 (219)
|.+ .|..-+-+-.+. +....+|+.....|.. . ++||+. .+ |...
T Consensus 170 a~~----~gad~IGvn~~~----l~~~~~dl~~~~~L~~~i~~~~~~~~vIA-eg-------------------GI~s-- 219 (254)
T 1vc4_A 170 ALE----AGAEVLGINNRD----LATLHINLETAPRLGRLARKRGFGGVLVA-ES-------------------GYSR-- 219 (254)
T ss_dssp HHH----HTCSEEEEESBC----TTTCCBCTTHHHHHHHHHHHTTCCSEEEE-ES-------------------CCCS--
T ss_pred HHH----cCCCEEEEcccc----CcCCCCCHHHHHHHHHhCccccCCCeEEE-Ec-------------------CCCC--
Confidence 654 355434333333 2233567877777765 3 678765 22 2211
Q ss_pred HHHHHHHHHcCCcEEEEeeec
Q 027740 152 PCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~ 172 (219)
+.-...... ||+|++|=+-+
T Consensus 220 ~~dv~~l~~-Ga~gvlVGsAl 239 (254)
T 1vc4_A 220 KEELKALEG-LFDAVLIGTSL 239 (254)
T ss_dssp HHHHHTTTT-TCSEEEECHHH
T ss_pred HHHHHHHHc-CCCEEEEeHHH
Confidence 233344566 99999886653
No 117
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.30 E-value=1.1 Score=37.29 Aligned_cols=103 Identities=15% Similarity=0.059 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHhcC-CCeEe-eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHH
Q 027740 3 EGLKILEKVKIAYD-IPIVT-DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 3 ~gl~~L~~~~~~~G-i~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~ 79 (219)
.+++.+++.+++++ +.+-. ++.+.++++...+. .|++-.|. .+.+..+++.+.|.|++. |.. |++|+..|.
T Consensus 53 ~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i~--G~~-t~~e~~~A~ 126 (214)
T 1wbh_A 53 CAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG---LTEPLLKAATEGTIPLIP--GIS-TVSELMLGM 126 (214)
T ss_dssp THHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS---CCHHHHHHHHHSSSCEEE--EES-SHHHHHHHH
T ss_pred hHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEEE--ecC-CHHHHHHHH
Confidence 35667777888875 32222 58888999988888 99988774 578989999999999998 555 999998875
Q ss_pred HHHHHcCCCcEEEEeecCCCCCCCCCc-cchhHHHHHh-c-CCCEEE
Q 027740 80 EKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNLEWMRE-A-NCPVVA 123 (219)
Q Consensus 80 e~i~~~Gn~~i~L~~cgs~~~~~~~~~-nl~~i~~lk~-~-~~pV~~ 123 (219)
+.|...+.+ ||.. .+ -+..+..++. + ++|++.
T Consensus 127 ----~~Gad~v~~------Fpa~--~~gG~~~lk~i~~~~~~ipvva 161 (214)
T 1wbh_A 127 ----DYGLKEFKF------FPAE--ANGGVKALQAIAGPFSQVRFCP 161 (214)
T ss_dssp ----HTTCCEEEE------TTTT--TTTHHHHHHHHHTTCTTCEEEE
T ss_pred ----HCCCCEEEE------ecCc--cccCHHHHHHHhhhCCCCeEEE
Confidence 468766655 4422 12 3566777777 6 788854
No 118
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.26 E-value=0.37 Score=39.49 Aligned_cols=150 Identities=13% Similarity=0.055 Sum_probs=87.8
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
++.+++.|+++|++++-. ++++...++ ++.+.++..++.... ..++.+..|.. |++|+..|.
T Consensus 43 ~~~i~~l~~~~~~~livn----d~~~~A~~~gadgvhl~~~~~~~~~------~~~~~ig~s~~---t~~e~~~A~---- 105 (210)
T 3ceu_A 43 ERLLTLIPEKYHRRIVTH----EHFYLKEEFNLMGIHLNARNPSEPH------DYAGHVSCSCH---SVEEVKNRK---- 105 (210)
T ss_dssp HHHHHHSCGGGGGGEEES----SCTTHHHHTTCSEEECCSSSCSCCT------TCCSEEEEEEC---SHHHHHTTG----
T ss_pred HHHHHHHHHHhCCeEEEe----CCHHHHHHcCCCEEEECcccccccc------ccCCEEEEecC---CHHHHHHHh----
Confidence 556777888899988863 556777777 999999888774221 12566666654 889977662
Q ss_pred HcCCCcEEEEeecCCCCCCC-----CCccchhHHHHHh---cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHH
Q 027740 84 LAGNPNVMVCERGTMFGYND-----LIVDPRNLEWMRE---ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIA 155 (219)
Q Consensus 84 ~~Gn~~i~L~~cgs~~~~~~-----~~~nl~~i~~lk~---~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~ 155 (219)
.|. +++++-- .|+++. ...++..+..+++ .++||+.= ||.. +.-.
T Consensus 106 -~Ga-Dyv~~g~--vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviai--------------------GGI~---~~nv 158 (210)
T 3ceu_A 106 -HFY-DYVFMSP--IYDSISKVNYYSTYTAEELREAQKAKIIDSKVMAL--------------------GGIN---EDNL 158 (210)
T ss_dssp -GGS-SEEEECC--CC---------CCCCHHHHHHHHHTTCSSTTEEEE--------------------SSCC---TTTH
T ss_pred -hCC-CEEEECC--cCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEE--------------------CCCC---HHHH
Confidence 365 4544422 232211 1356777777766 37898751 2221 1123
Q ss_pred HHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 027740 156 RTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVS 204 (219)
Q Consensus 156 ~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~l 204 (219)
..+.+.||+|+-+=+-+.-. .|.... .+|.+.++..+++.+..
T Consensus 159 ~~~~~~Ga~gVav~s~i~~~---~d~~~~---~~~~~~v~~~~~~~~~~ 201 (210)
T 3ceu_A 159 LEIKDFGFGGAVVLGDLWNK---FDACLD---QNYLAVIEHFKKLKKLA 201 (210)
T ss_dssp HHHHHTTCSEEEESHHHHTT---CCTTTS---SCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEhHHhHcC---CCHHHH---HHHHHHHHHHHHHHHhh
Confidence 45667999998776554321 122111 45666666666665543
No 119
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=92.13 E-value=0.49 Score=41.16 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=60.0
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
...++.++++|+..- + ..+.+.+ ++- +|++-|+.-.-...++..++.+.||+|++.+.++.+++|...-++..+
T Consensus 39 ~~~~~~~~~~g~~~~--~--~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~ 114 (344)
T 3mz0_A 39 EAAQKVVEQYQLNAT--V--YPNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEI 114 (344)
T ss_dssp HHHHHHHHHTTCCCE--E--ESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCe--e--eCCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHH
Confidence 345667788885211 1 1244444 433 899999999999999999999999999999999999999988888776
Q ss_pred HcCC
Q 027740 84 LAGN 87 (219)
Q Consensus 84 ~~Gn 87 (219)
+.|.
T Consensus 115 ~~g~ 118 (344)
T 3mz0_A 115 KVGK 118 (344)
T ss_dssp HHSS
T ss_pred HHCC
Confidence 6654
No 120
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=92.06 E-value=1 Score=40.60 Aligned_cols=128 Identities=16% Similarity=0.027 Sum_probs=73.7
Q ss_pred HHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEEc
Q 027740 49 TDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVAD 124 (219)
Q Consensus 49 ~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~d 124 (219)
.+.++++-+ +++||++|-= . +.++...+ .+.|..-|++--.|... .+.....+..++.+++ . .+||+.|
T Consensus 206 w~~i~~lr~~~~~PvivK~v-~-~~e~A~~a----~~~GaD~I~vsn~GG~~-~d~~~~~~~~L~~i~~av~~~ipVia~ 278 (352)
T 3sgz_A 206 WNDLSLLQSITRLPIILKGI-L-TKEDAELA----MKHNVQGIVVSNHGGRQ-LDEVSASIDALREVVAAVKGKIEVYMD 278 (352)
T ss_dssp HHHHHHHHHHCCSCEEEEEE-C-SHHHHHHH----HHTTCSEEEECCGGGTS-SCSSCCHHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEec-C-cHHHHHHH----HHcCCCEEEEeCCCCCc-cCCCccHHHHHHHHHHHhCCCCeEEEE
Confidence 455776654 6899999954 3 67775554 45787666654444321 1111245677777765 4 6899886
Q ss_pred CCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 027740 125 VTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVS 204 (219)
Q Consensus 125 s~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~l 204 (219)
..=. .| .-...|.++||++++|=.-|--.-+ ..+. .--.+-++.+.++++..-...
T Consensus 279 GGI~----------------~g------~Dv~kaLalGA~aV~iGr~~l~~l~-~~G~-~gv~~~l~~l~~el~~~m~~~ 334 (352)
T 3sgz_A 279 GGVR----------------TG------TDVLKALALGARCIFLGRPILWGLA-CKGE-DGVKEVLDILTAELHRCMTLS 334 (352)
T ss_dssp SSCC----------------SH------HHHHHHHHTTCSEEEESHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC----------------CH------HHHHHHHHcCCCEEEECHHHHHHHH-hcCc-HHHHHHHHHHHHHHHHHHHHh
Confidence 3322 12 3355788899999998664211000 0110 000124667777777777777
Q ss_pred CCC
Q 027740 205 KGK 207 (219)
Q Consensus 205 g~~ 207 (219)
|..
T Consensus 335 G~~ 337 (352)
T 3sgz_A 335 GCQ 337 (352)
T ss_dssp TCS
T ss_pred CCC
Confidence 764
No 121
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.03 E-value=1.1 Score=39.67 Aligned_cols=124 Identities=9% Similarity=0.042 Sum_probs=79.8
Q ss_pred cccHHHHhhh-ccccccCCC--CCC-CHHHHHHHHhcCCeEEEeC--CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC
Q 027740 26 TVQCEEVGKV-ADIIQIPAF--LCR-QTDLLVAAAKTGKIINIKK--GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF 99 (219)
Q Consensus 26 ~~~~~~l~~~-vd~~kI~S~--~~~-n~~LL~~~a~~gkPVilst--G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~ 99 (219)
...++...+. ++.+-|.-. +.. -.+.++++-+.|+.+.+.- ....+++.+...++.+...|..-|.|+.-+..
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~- 174 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGA- 174 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCC-
T ss_pred HHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCc-
Confidence 3445555555 666665421 112 2566777777898887763 44448899999999999999876666554322
Q ss_pred CCCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 100 GYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 100 ~~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
..|. ++ -.-+..+|+ + ++||++ +.|-. .| +-..-+.+|+.+||+ .|+.-..
T Consensus 175 ~~P~-~v-~~lv~~l~~~~~~~~pi~~-H~Hn~---------------~G---~avAn~laA~~aGa~--~vd~tv~ 228 (345)
T 1nvm_A 175 MSMN-DI-RDRMRAFKAVLKPETQVGM-HAHHN---------------LS---LGVANSIVAVEEGCD--RVDASLA 228 (345)
T ss_dssp CCHH-HH-HHHHHHHHHHSCTTSEEEE-ECBCT---------------TS---CHHHHHHHHHHTTCC--EEEEBGG
T ss_pred cCHH-HH-HHHHHHHHHhcCCCceEEE-EECCC---------------cc---HHHHHHHHHHHcCCC--EEEecch
Confidence 1221 12 244667777 7 799999 78863 13 225668899999998 8887644
No 122
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=91.93 E-value=0.74 Score=40.15 Aligned_cols=75 Identities=15% Similarity=0.144 Sum_probs=59.4
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHh-hh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVG-KV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~-~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..++.++++|++.. .+.+.+. +- +|++-|..-+-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 42 ~~~~~~~~~g~~~~------~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~ 115 (354)
T 3db2_A 42 KREKFGKRYNCAGD------ATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKE 115 (354)
T ss_dssp HHHHHHHHHTCCCC------SSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCc------CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHH
Confidence 45667778888752 3444443 44 9999999999999999999999999999999999999998888876655
Q ss_pred cCC
Q 027740 85 AGN 87 (219)
Q Consensus 85 ~Gn 87 (219)
.|.
T Consensus 116 ~~~ 118 (354)
T 3db2_A 116 TGV 118 (354)
T ss_dssp HCC
T ss_pred cCC
Confidence 543
No 123
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=91.82 E-value=0.48 Score=41.38 Aligned_cols=75 Identities=9% Similarity=-0.011 Sum_probs=58.4
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..++.++++|+.+.+ +.+. +++- +|++-|+...-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 51 ~~~~~~~~~~~~~~~------~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~ 124 (354)
T 3q2i_A 51 ALKAAVERTGARGHA------SLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK 124 (354)
T ss_dssp HHHHHHHHHCCEEES------CHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCceeC------CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH
Confidence 456667788874432 3344 4433 8999999999999999999999999999999999999998888776655
Q ss_pred cCC
Q 027740 85 AGN 87 (219)
Q Consensus 85 ~Gn 87 (219)
.|.
T Consensus 125 ~g~ 127 (354)
T 3q2i_A 125 AKK 127 (354)
T ss_dssp HTC
T ss_pred hCC
Confidence 543
No 124
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=91.68 E-value=5.3 Score=34.68 Aligned_cols=172 Identities=17% Similarity=0.219 Sum_probs=100.0
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeC--CCCCC---HHHH----H
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA---SSVM----V 76 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilst--G~~~t---~~ei----~ 76 (219)
.++.. .+.++++.-+-|.++-++...+. ++++-==|....+..+++.+++.+.|+++-- |..-+ ++|+ .
T Consensus 73 vi~~l-~~~~v~iSIDT~~~~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~ 151 (270)
T 4hb7_A 73 VVEAI-VGFDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLL 151 (270)
T ss_dssp HHHHH-TTSSSEEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHH
T ss_pred HHHHh-hcCCCeEEEECCCHHHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHH
Confidence 33333 45799999999999988887777 8876533334455788999999999999952 21101 2333 3
Q ss_pred HHHHHHHHcCCC-cEEEEeecCCCCCCCCCccc---hhHHHHHhcCCCEEEcCCCC--CCCCCCCccCCCCccCCCCccc
Q 027740 77 NSAEKVRLAGNP-NVMVCERGTMFGYNDLIVDP---RNLEWMREANCPVVADVTHS--LQQPAGKKLDGGGVASGGLREL 150 (219)
Q Consensus 77 ~A~e~i~~~Gn~-~i~L~~cgs~~~~~~~~~nl---~~i~~lk~~~~pV~~ds~Hs--~~~~~~~~~~~~~~~~~G~~~~ 150 (219)
.-++.+.+.|.+ +=+++.-|.-|+-.. +=|+ +.+..++.+++||.+-.|.= ++ ++-+.. .+...|..
T Consensus 152 ~~i~~a~~aGI~~~~IilDPGiGFgKt~-~~N~~ll~~l~~~~~lg~PvLvG~SRKsfig-----~~lg~~-~~~~~R~~ 224 (270)
T 4hb7_A 152 AQAHQAKIAGIPSNKIWLDPGIGFAKTR-NEEAEVMARLDELVATEYPVLLATSRKRFTK-----EMMGYD-TTPVERDE 224 (270)
T ss_dssp HHHHHHHHTTCCGGGEEEECCTTSSCCH-HHHHHHHTCHHHHHTTCSCBEECCTTSHHHH-----HHHCSC-CCSGGGHH
T ss_pred HHHHHHHHcCCCCceEEEeCCCCccccc-ccHHHHHhhHHHHhcCCCCEEEEecHHHHHH-----HHhCCC-CChHHhhH
Confidence 345567788864 345778887763221 1233 45556666799988744320 00 000000 00111221
Q ss_pred H-HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 027740 151 I-PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAK 202 (219)
Q Consensus 151 ~-~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~ 202 (219)
. ..++..|+..||+ ++=+| +..+.++.++-+..+++
T Consensus 225 gt~a~~~~a~~~Ga~--ivRVH--------------DV~e~~~a~~~~~ai~~ 261 (270)
T 4hb7_A 225 VTAATTAYGIMKGVR--AVRVH--------------NVELNAKLAKGIDFLKE 261 (270)
T ss_dssp HHHHHHHHHHHHTCC--EEEES--------------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCC--EEEeC--------------CHHHHHHHHHHHHHHHh
Confidence 1 1123355778999 99999 56666666555555544
No 125
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=91.63 E-value=1.4 Score=40.94 Aligned_cols=136 Identities=11% Similarity=0.055 Sum_probs=87.6
Q ss_pred HHHH-HHHHHHhcCCCeEeeeCCcccHHHHhhh-cc-ccccCCCCCCCH-HHHHHHHhcCCeEEEeCCCCCCHHHHHHHH
Q 027740 4 GLKI-LEKVKIAYDIPIVTDVHETVQCEEVGKV-AD-IIQIPAFLCRQT-DLLVAAAKTGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 4 gl~~-L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd-~~kI~S~~~~n~-~LL~~~a~~gkPVilstG~~~t~~ei~~A~ 79 (219)
.+.+ ++.+.+..++|+.-+ +|++.++...+. .+ ---|.|-+..|+ .++..+.+.+.||++... +++...+-+
T Consensus 142 ~~~~~Vk~V~e~~dvPlsID-~dp~vleaale~~~d~~pLIns~t~en~~~~~~la~~y~~~vV~~~~---~l~~l~~lv 217 (445)
T 2h9a_A 142 TFAKAVATAREVTDLPFILI-GTPEQLAAALETEGANNPLLYAATADNYEQMVELAKKYNVPLTVSAK---GLDALAELV 217 (445)
T ss_dssp HHHHHHHHHHHHCCSCEEEE-SCHHHHHHHHHHHGGGCCEEEEECTTTHHHHHHHHHHHTCCEEEECS---SHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEE-CCHHHHHHHHHhcCCCCCEEEECCHHHHHHHHHHHHHhCCeEEEEcC---CHHHHHHHH
Confidence 3445 445556679999999 999988887776 55 112233333364 566667778999999764 799999999
Q ss_pred HHHHHcCCCcEEEEeecCC-CCCCCCCccchhHHHH--H-h---cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHH
Q 027740 80 EKVRLAGNPNVMVCERGTM-FGYNDLIVDPRNLEWM--R-E---ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 152 (219)
Q Consensus 80 e~i~~~Gn~~i~L~~cgs~-~~~~~~~~nl~~i~~l--k-~---~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~ 152 (219)
+.+.+.|.++|+ +.-++. +.+. . -|+..|..+ + . +++|++...+.- +.+ +-.
T Consensus 218 ~~a~~~Gi~~Ii-LDP~~~~~~~s-l-~~~~~IR~~al~~~d~~lg~P~i~~vs~~-----------------d~~-~ea 276 (445)
T 2h9a_A 218 QKITALGYKNLI-LDPQPENISEG-L-FYQTQIRRLAIKKLFRPFGYPTIAFALDE-----------------NPY-QAV 276 (445)
T ss_dssp HHHHHTTCCCEE-EECCCSSHHHH-H-HHHHHHHHHHHHSCCGGGCSCBEEECCCS-----------------SHH-HHH
T ss_pred HHHHHCCCCcEE-EcCCchhHHHH-H-HHHHHHHHhhhcCCCcccCCCeeecCCch-----------------hHH-HHH
Confidence 999999999887 555542 2221 1 144444443 1 2 467877765532 222 334
Q ss_pred HHHHHHHHcCCc
Q 027740 153 CIARTAIAVGVD 164 (219)
Q Consensus 153 ~~~~aAvalGA~ 164 (219)
..+..++..||+
T Consensus 277 ~lA~~~~~~Gas 288 (445)
T 2h9a_A 277 MEASVYIAKYAG 288 (445)
T ss_dssp HHHHHHHHTTCS
T ss_pred HHHHHHHHcCCe
Confidence 455566899999
No 126
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=91.61 E-value=1.9 Score=38.44 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhcCCCeEee-----eCCcccHHHHhhh-ccc-cccCCCCCCC-HHHHHHHHhcCCeEEEeCCCCCCHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTD-----VHETVQCEEVGKV-ADI-IQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFCASSVM 75 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt-----~~d~~~~~~l~~~-vd~-~kI~S~~~~n-~~LL~~~a~~gkPVilstG~~~t~~ei 75 (219)
-.+.++++.+..++|+.-+ -++++-++...+. .+. --|.|-...| ..++..+++.|.||++.... +++..
T Consensus 117 ~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~lINsv~~~~~~~m~~laa~~g~~vVlmh~~--d~~~~ 194 (323)
T 4djd_D 117 CVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENLLLGNAEQENYKSLTAACMVHKHNIIARSPL--DINIC 194 (323)
T ss_dssp HHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEEBTTBCHHHHHHHHHHTCEEEEECSS--CHHHH
T ss_pred HHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCCeEEECCcccHHHHHHHHHHhCCeEEEEccc--hHHHH
Confidence 3455677777889999999 8888888876665 331 1233333334 56888899999999998642 57777
Q ss_pred HHHHHHHHHcCC--CcEEEEeecCC-CCCCCCCccchhHHHHH-------h-cCCCEEEc
Q 027740 76 VNSAEKVRLAGN--PNVMVCERGTM-FGYNDLIVDPRNLEWMR-------E-ANCPVVAD 124 (219)
Q Consensus 76 ~~A~e~i~~~Gn--~~i~L~~cgs~-~~~~~~~~nl~~i~~lk-------~-~~~pV~~d 124 (219)
.+.++.+.+.|- ++| ++..|+. |++.. +-|+..+..+| + +++|++.-
T Consensus 195 ~~l~~~a~~~GI~~e~I-IlDPg~g~fgk~~-e~~l~~l~~ir~~al~~~~~lg~PvL~G 252 (323)
T 4djd_D 195 KQLNILINEMNLPLDHI-VIDPSIGGLGYGI-EYSFSIMERIRLGALQGDKMLSMPVICT 252 (323)
T ss_dssp HHHHHHHHTTTCCGGGE-EEECCCCCTTTTH-HHHHHHHHHHHHHHHHTCGGGCSCBEEE
T ss_pred HHHHHHHHHcCCCHHHE-EEeCCCccccCCH-HHHHHHHHHHHHHhhcccccCCCCEEEe
Confidence 888888888897 455 6788875 55542 23455555554 2 68998773
No 127
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=91.57 E-value=1.4 Score=37.89 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=52.0
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
+.|++..++-+..++-++||..+...+++. +|.+.+++.-+.+ ..|.| +++.- |++|+...++.|..
T Consensus 10 ~~lr~l~~~~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~--------~~G~p---D~~~v-t~~em~~~~~~I~r 77 (255)
T 2qiw_A 10 TKFASDHESGKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVAD--------ATGSS---DGENM-NFADYMAVVKKITS 77 (255)
T ss_dssp HHHHHHHHTCCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHH--------HTTCC---TTTCS-CHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHH--------hCCCC---CCCCc-CHHHHHHHHHHHHh
Confidence 346666665667777799999999999998 9999999754332 25777 56666 99999999888865
Q ss_pred c
Q 027740 85 A 85 (219)
Q Consensus 85 ~ 85 (219)
.
T Consensus 78 ~ 78 (255)
T 2qiw_A 78 A 78 (255)
T ss_dssp H
T ss_pred c
Confidence 3
No 128
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=91.56 E-value=0.67 Score=39.95 Aligned_cols=73 Identities=19% Similarity=0.104 Sum_probs=58.1
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHH-hh-hccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEV-GK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~-~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
...+.++++|++ . .+.+.+ ++ -+|++-|+..+-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 40 ~~~~~~~~~~~~-~------~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~ 112 (331)
T 4hkt_A 40 AAEAIAGAYGCE-V------RTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSD 112 (331)
T ss_dssp HHHHHHHHTTCE-E------CCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-c------CCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 456667778876 2 344444 43 38999999999999999999999999999999999999999888886665
Q ss_pred cC
Q 027740 85 AG 86 (219)
Q Consensus 85 ~G 86 (219)
.|
T Consensus 113 ~g 114 (331)
T 4hkt_A 113 TK 114 (331)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 129
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=91.54 E-value=0.5 Score=41.67 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=58.9
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
...+++++++|..-.. .+.+.+ ++- +|++-|++-+-...++..++.+.||+|++.+.++.|++|....++..+
T Consensus 62 ~~a~~~a~~~~~~~~~-----~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~ 136 (361)
T 3u3x_A 62 ALAAEFSAVYADARRI-----ATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQA 136 (361)
T ss_dssp HHHHHHHHHSSSCCEE-----SCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccc-----CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHH
Confidence 3456677888743221 244444 433 999999999999999999999999999999999999999998888766
Q ss_pred HcC
Q 027740 84 LAG 86 (219)
Q Consensus 84 ~~G 86 (219)
+.|
T Consensus 137 ~~g 139 (361)
T 3u3x_A 137 ETG 139 (361)
T ss_dssp TTC
T ss_pred HcC
Confidence 554
No 130
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=91.53 E-value=0.63 Score=40.89 Aligned_cols=78 Identities=15% Similarity=0.099 Sum_probs=59.8
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
...+.++++|+.. ..+ .+.+.+ ++- +|++-|....-...++..++.+.||+|++.+.++.+++|.+..++..++
T Consensus 61 ~~~~~a~~~g~~~--~~~--~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~ 136 (357)
T 3ec7_A 61 RAQAALDKYAIEA--KDY--NDYHDLINDKDVEVVIITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQK 136 (357)
T ss_dssp HHHHHHHHHTCCC--EEE--SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCC--eee--CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHH
Confidence 3456677788521 111 234444 443 8999999999999999999999999999999999999999998887777
Q ss_pred cCCC
Q 027740 85 AGNP 88 (219)
Q Consensus 85 ~Gn~ 88 (219)
.|..
T Consensus 137 ~g~~ 140 (357)
T 3ec7_A 137 NGKR 140 (357)
T ss_dssp HTSC
T ss_pred hCCe
Confidence 6653
No 131
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=91.51 E-value=0.76 Score=39.79 Aligned_cols=76 Identities=20% Similarity=0.150 Sum_probs=59.2
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..++.++++|++-. ..+.+.+ ++- +|++-|+...-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 42 ~~~~~~~~~~~~~~-----~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~ 116 (330)
T 3e9m_A 42 NAQKMAKELAIPVA-----YGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQE 116 (330)
T ss_dssp HHHHHHHHTTCCCC-----BSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCce-----eCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 35667778887511 1344444 433 8999999999999999999999999999999999999999988887766
Q ss_pred cCC
Q 027740 85 AGN 87 (219)
Q Consensus 85 ~Gn 87 (219)
.|.
T Consensus 117 ~g~ 119 (330)
T 3e9m_A 117 QGV 119 (330)
T ss_dssp TTC
T ss_pred cCC
Confidence 553
No 132
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=91.38 E-value=0.25 Score=43.50 Aligned_cols=140 Identities=16% Similarity=0.199 Sum_probs=89.0
Q ss_pred HHHHHHHHHHhcCCCeEee--eCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHh--cCCeEEEeCCCCCCHHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTD--VHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAK--TGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt--~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~--~gkPVilstG~~~t~~ei~~A 78 (219)
.+.++++.++...||++.- ......++.+.+. +|++ -.+...+..++++++.+ .+.|+++. .. +.+|.+.+
T Consensus 66 ~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD~I-d~s~~~~~~~li~~i~~~~~g~~vvv~--v~-~~~Ea~~a 141 (297)
T 4adt_A 66 DPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVDML-DESEVLTMADEYNHINKHKFKTPFVCG--CT-NLGEALRR 141 (297)
T ss_dssp CHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCSEE-EEETTSCCSCSSCCCCGGGCSSCEEEE--ES-SHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCCEE-EcCCCCCHHHHHHHHHhcCCCCeEEEE--eC-CHHHHHHH
Confidence 4889999999999999964 3445666666677 8888 44444566777887777 58999884 44 89998877
Q ss_pred HHHHHHcCCCcEEEEeecCCC-CC-----------------------CC-------CCccchhHHHHHh-cCCCEEEcCC
Q 027740 79 AEKVRLAGNPNVMVCERGTMF-GY-----------------------ND-------LIVDPRNLEWMRE-ANCPVVADVT 126 (219)
Q Consensus 79 ~e~i~~~Gn~~i~L~~cgs~~-~~-----------------------~~-------~~~nl~~i~~lk~-~~~pV~~ds~ 126 (219)
++ .|. +++..+ +..+ +. +. ...++..+..+++ .++||++-+.
T Consensus 142 ~~----~Ga-d~I~v~-g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~ 215 (297)
T 4adt_A 142 IS----EGA-SMIRTK-GEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAA 215 (297)
T ss_dssp HH----HTC-SEEEEC-CCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEE
T ss_pred Hh----CCC-CEEEEC-CCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEec
Confidence 53 354 344444 2211 10 00 1345666777776 6788862011
Q ss_pred CCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 127 HSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 127 Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+|.+. +.-...+.++||+|+++=..+.
T Consensus 216 ------------------GGI~t--~~dv~~~~~~GAdgVlVGsai~ 242 (297)
T 4adt_A 216 ------------------GGIAT--PADAAMCMQLGMDGVFVGSGIF 242 (297)
T ss_dssp ------------------SCCCS--HHHHHHHHHTTCSCEEESHHHH
T ss_pred ------------------CCCCC--HHHHHHHHHcCCCEEEEhHHHH
Confidence 12111 3445567888999999876643
No 133
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=91.38 E-value=1 Score=41.86 Aligned_cols=92 Identities=15% Similarity=0.061 Sum_probs=68.8
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccc---cccCCCC--CCCHHHHHHHHhcC--CeEEEeCCCCCCHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADI---IQIPAFL--CRQTDLLVAAAKTG--KIINIKKGQFCASSVMV 76 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~---~kI~S~~--~~n~~LL~~~a~~g--kPVilstG~~~t~~ei~ 76 (219)
-+..+++.+++++|.++=+|+++++.+-..++... ++|-..+ ++|..-++.+-+.+ --|++|-.+.+++.|+.
T Consensus 284 lid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITEal 363 (441)
T 3qtp_A 284 LIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETF 363 (441)
T ss_dssp HHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHHHH
T ss_pred HHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEecccccccHHHHH
Confidence 35667788899999999999999999988877332 4455555 45776666664443 47889999988999999
Q ss_pred HHHHHHHHcCCCcEEEEeec
Q 027740 77 NSAEKVRLAGNPNVMVCERG 96 (219)
Q Consensus 77 ~A~e~i~~~Gn~~i~L~~cg 96 (219)
++++..++.|- .+++-||.
T Consensus 364 kaa~lA~~~G~-~vmvsHrs 382 (441)
T 3qtp_A 364 KTIKMAQEKGW-GVMASHRS 382 (441)
T ss_dssp HHHHHHHHTTC-EEEEECCS
T ss_pred HHHHHHHHcCC-eEEEeCCC
Confidence 99988888775 46666763
No 134
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=91.32 E-value=0.66 Score=39.80 Aligned_cols=74 Identities=9% Similarity=0.012 Sum_probs=56.6
Q ss_pred HHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 8 LEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 8 L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
.+++++++|+++ + .+.+.+.+-+|++-|....-...++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 44 ~~~~~~~~g~~~----~--~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~ 117 (319)
T 1tlt_A 44 ALPICESWRIPY----A--DSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL 117 (319)
T ss_dssp HHHHHHHHTCCB----C--SSHHHHHTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCc----c--CcHHHhhcCCCEEEEeCCchhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 345566778762 2 2334453348999999988888899999999999999999999899998888887766654
No 135
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=91.22 E-value=1.7 Score=36.44 Aligned_cols=139 Identities=11% Similarity=0.117 Sum_probs=82.7
Q ss_pred HHHHHHHHHHhc--CCCeEeee--CCc-ccHHHHhhh-ccccccCCCCCCC-HHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 027740 4 GLKILEKVKIAY--DIPIVTDV--HET-VQCEEVGKV-ADIIQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 4 gl~~L~~~~~~~--Gi~~~tt~--~d~-~~~~~l~~~-vd~~kI~S~~~~n-~~LL~~~a~~gkPVilstG~~~t~~ei~ 76 (219)
|.+.+++.++.+ .+++-.-. .++ ..++.+.+. +|++.+......+ ...++++-+.|+-+.+..... |..|..
T Consensus 50 G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~-t~~e~l 128 (228)
T 3ovp_A 50 GHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG-TSVEYL 128 (228)
T ss_dssp CHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTT-SCGGGT
T ss_pred CHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCC-CCHHHH
Confidence 566777776663 56555432 233 245556666 8999888765554 467888888898888888777 443322
Q ss_pred HHHHHHHHcCCCcEEEEeecCCCCCCCCCc---cchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccH
Q 027740 77 NSAEKVRLAGNPNVMVCERGTMFGYNDLIV---DPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELI 151 (219)
Q Consensus 77 ~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~---nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~ 151 (219)
+.+.. ..+.+++.++- .++.-... .+.-+..+|+ . ++++.+| +|.+
T Consensus 129 ---~~~l~--~~D~Vl~msv~-pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~Vd--------------------GGI~--- 179 (228)
T 3ovp_A 129 ---APWAN--QIDMALVMTVE-PGFGGQKFMEDMMPKVHWLRTQFPSLDIEVD--------------------GGVG--- 179 (228)
T ss_dssp ---GGGGG--GCSEEEEESSC-TTTCSCCCCGGGHHHHHHHHHHCTTCEEEEE--------------------SSCS---
T ss_pred ---HHHhc--cCCeEEEeeec-CCCCCcccCHHHHHHHHHHHHhcCCCCEEEe--------------------CCcC---
Confidence 22222 23566665442 12222212 2444677776 3 6788876 2322
Q ss_pred HHHHHHHHHcCCcEEEEeeec
Q 027740 152 PCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~ 172 (219)
...+..++.+|||++++=+-+
T Consensus 180 ~~t~~~~~~aGAd~~VvGsaI 200 (228)
T 3ovp_A 180 PDTVHKCAEAGANMIVSGSAI 200 (228)
T ss_dssp TTTHHHHHHHTCCEEEESHHH
T ss_pred HHHHHHHHHcCCCEEEEeHHH
Confidence 233567889999988876543
No 136
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=91.21 E-value=1.1 Score=39.33 Aligned_cols=82 Identities=12% Similarity=0.027 Sum_probs=57.0
Q ss_pred HHHHHHHHHHhcCCCeEeeeCC-------cc----cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCC
Q 027740 4 GLKILEKVKIAYDIPIVTDVHE-------TV----QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCA 71 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d-------~~----~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t 71 (219)
-+..+.+.|+++|++++.+... ++ .+....++ +|++|.+.-. -.|-+.++....||+++=|...+
T Consensus 159 ~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~---e~~~~vv~~~~vPVv~~GG~~~~ 235 (295)
T 3glc_A 159 NIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE---KGFERIVAGCPVPIVIAGGKKLP 235 (295)
T ss_dssp HHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT---TTHHHHHHTCSSCEEEECCSCCC
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH---HHHHHHHHhCCCcEEEEECCCCC
Confidence 3567888999999999986532 22 22233356 8999998431 12333344578999999998867
Q ss_pred HHHHHHHHHHHHHcCCC
Q 027740 72 SSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 72 ~~ei~~A~e~i~~~Gn~ 88 (219)
.+|+.+.++.....|..
T Consensus 236 ~~~~l~~v~~ai~aGA~ 252 (295)
T 3glc_A 236 EREALEMCWQAIDQGAS 252 (295)
T ss_dssp HHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHhCCe
Confidence 78888888766677875
No 137
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=91.16 E-value=0.098 Score=45.14 Aligned_cols=139 Identities=19% Similarity=0.219 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhcCCCeEe--eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVT--DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKT--GKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t--t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A 78 (219)
.+..+++.++.+++|++. .+.+.+.++.+.+. +|++ .+++..+..++++.+.+. +.|++.. .. +++++..+
T Consensus 66 ~~~~i~~i~~~~~~Pvi~~~~~~~~~~~~~~~~aGad~v-~~~~~~~~~~~~~~~~~~~~~i~l~~~--v~-~~~~~~~a 141 (297)
T 2zbt_A 66 DPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFI-DESEVLTPADEEHHIDKWKFKVPFVCG--AR-NLGEALRR 141 (297)
T ss_dssp CHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEE-EEETTSCCSCSSCCCCGGGCSSCEEEE--ES-SHHHHHHH
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHCCCCEE-eeeCCCChHHHHHHHHHhCCCceEEee--cC-CHHHHHHH
Confidence 367788899999999875 34455677777777 8887 555544444445554443 6677754 23 78887664
Q ss_pred HHHHHHcCCCcEEEEee--cCC-------------------CCCCC---------CCccchhHHHHHh-cCCCEE--EcC
Q 027740 79 AEKVRLAGNPNVMVCER--GTM-------------------FGYND---------LIVDPRNLEWMRE-ANCPVV--ADV 125 (219)
Q Consensus 79 ~e~i~~~Gn~~i~L~~c--gs~-------------------~~~~~---------~~~nl~~i~~lk~-~~~pV~--~ds 125 (219)
.+.|.. ++.+|- ++. +++.+ ...++..+..+++ .++||+ .+.
T Consensus 142 ----~~~Gad-~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~G 216 (297)
T 2zbt_A 142 ----IAEGAA-MIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAG 216 (297)
T ss_dssp ----HHTTCS-EEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCS
T ss_pred ----HHcCCC-EEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeC
Confidence 346664 444441 000 00110 1245677778877 788876 431
Q ss_pred CCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 126 THSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 126 ~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
|.+. ..-...+..+||+|+++=+-+.
T Consensus 217 --------------------GI~~--~e~i~~~~~aGadgvvvGsai~ 242 (297)
T 2zbt_A 217 --------------------GIAT--PADAALMMHLGMDGVFVGSGIF 242 (297)
T ss_dssp --------------------SCCS--HHHHHHHHHTTCSEEEECGGGG
T ss_pred --------------------CCCC--HHHHHHHHHcCCCEEEEchHHh
Confidence 2211 3344566788999999887654
No 138
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=91.15 E-value=1.7 Score=34.78 Aligned_cols=138 Identities=16% Similarity=0.104 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHhc-CCCeEe--eeCC-ccc-HHHHhhh-ccccccC--CCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHH
Q 027740 3 EGLKILEKVKIAY-DIPIVT--DVHE-TVQ-CEEVGKV-ADIIQIP--AFLCRQTDLLVAAAKTGKIINIKKGQFCASSV 74 (219)
Q Consensus 3 ~gl~~L~~~~~~~-Gi~~~t--t~~d-~~~-~~~l~~~-vd~~kI~--S~~~~n~~LL~~~a~~gkPVilstG~~~t~~e 74 (219)
.|...+++.++.+ +++++. =++| +.. ++.+.+. +|++-+. +.+..-..+++.+.+.|+++.++.-...+++|
T Consensus 39 ~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~ 118 (207)
T 3ajx_A 39 EGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKAT 118 (207)
T ss_dssp HCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHH
T ss_pred hCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChHH
Confidence 4667777777776 777775 3456 444 5666666 7777542 22122234566666678887664431116777
Q ss_pred HHHHHHHHHHcCCCcEEEEeecCC--C-CCCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCc
Q 027740 75 MVNSAEKVRLAGNPNVMVCERGTM--F-GYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLR 148 (219)
Q Consensus 75 i~~A~e~i~~~Gn~~i~L~~cgs~--~-~~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~ 148 (219)
....+ ...|. +++-++.+.. + +.+ ... ..+|+ . ++||..+ +|.+
T Consensus 119 ~~~~~---~~~g~-d~v~~~~~~~~~~~g~~-----~~~-~~i~~~~~~~~pi~v~--------------------GGI~ 168 (207)
T 3ajx_A 119 RAQEV---RALGA-KFVEMHAGLDEQAKPGF-----DLN-GLLAAGEKARVPFSVA--------------------GGVK 168 (207)
T ss_dssp HHHHH---HHTTC-SEEEEECCHHHHTSTTC-----CTH-HHHHHHHHHTSCEEEE--------------------SSCC
T ss_pred HHHHH---HHhCC-CEEEEEecccccccCCC-----chH-HHHHHhhCCCCCEEEE--------------------CCcC
Confidence 33332 33464 4542333322 1 211 111 44554 3 7898875 2332
Q ss_pred ccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 149 ELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 149 ~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+..+..+++.||+|+++=+-++
T Consensus 169 ---~~~~~~~~~aGad~vvvGsaI~ 190 (207)
T 3ajx_A 169 ---VATIPAVQKAGAEVAVAGGAIY 190 (207)
T ss_dssp ---GGGHHHHHHTTCSEEEESHHHH
T ss_pred ---HHHHHHHHHcCCCEEEEeeecc
Confidence 2234567899999988766543
No 139
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.08 E-value=1.5 Score=37.39 Aligned_cols=83 Identities=19% Similarity=0.242 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhcCCCeEeeeCC----------cccHH----HHhhh-ccccccCCCCCCCHHHHHHHHh-cCC-eEEEeC
Q 027740 4 GLKILEKVKIAYDIPIVTDVHE----------TVQCE----EVGKV-ADIIQIPAFLCRQTDLLVAAAK-TGK-IINIKK 66 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d----------~~~~~----~l~~~-vd~~kI~S~~~~n~~LL~~~a~-~gk-PVilst 66 (219)
-+..+.+.|+++|++++-+.+- ++.+. ...+. +|++|++.. .+.+.++.+.+ .++ ||+.+=
T Consensus 126 ~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~--~~~e~~~~~~~~~~~~pV~asG 203 (263)
T 1w8s_A 126 ELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYT--GDPKTFSWAVKVAGKVPVLMSG 203 (263)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECC--SSHHHHHHHHHHTTTSCEEEEC
T ss_pred HHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCC--CCHHHHHHHHHhCCCCeEEEEe
Confidence 4567788899999999988653 23333 23445 899999942 36666776654 577 999999
Q ss_pred CCCC-CHHHHHHHHHHHHHcCCC
Q 027740 67 GQFC-ASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 67 G~~~-t~~ei~~A~e~i~~~Gn~ 88 (219)
|... |.++.+.-++.+.+.|..
T Consensus 204 Gi~~~~~~~~l~~i~~~~~aGA~ 226 (263)
T 1w8s_A 204 GPKTKTEEDFLKQVEGVLEAGAL 226 (263)
T ss_dssp CSCCSSHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCe
Confidence 9876 688888888777778875
No 140
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=91.06 E-value=0.76 Score=41.25 Aligned_cols=81 Identities=20% Similarity=0.188 Sum_probs=60.9
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcccHHHHhhh-ccccccCCC--C-----------CCCHHHHHHHH----hcCCeEEEe
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETVQCEEVGKV-ADIIQIPAF--L-----------CRQTDLLVAAA----KTGKIINIK 65 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~--~-----------~~n~~LL~~~a----~~gkPVils 65 (219)
++.+++.++.++++++. .+.+++.+..+.+. +|++++|.. . .-+...+..++ +.+.||+-+
T Consensus 134 ~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~ 213 (361)
T 3khj_A 134 IRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIAD 213 (361)
T ss_dssp HHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEE
Confidence 46677788888999995 99999999999998 999999521 1 23455555553 358999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCcE
Q 027740 66 KGQFCASSVMVNSAEKVRLAGNPNV 90 (219)
Q Consensus 66 tG~~~t~~ei~~A~e~i~~~Gn~~i 90 (219)
=|.. +.+++..++. .|..-+
T Consensus 214 GGI~-~~~di~kala----~GAd~V 233 (361)
T 3khj_A 214 GGIR-YSGDIGKALA----VGASSV 233 (361)
T ss_dssp SCCC-SHHHHHHHHH----HTCSEE
T ss_pred CCCC-CHHHHHHHHH----cCCCEE
Confidence 9998 9999887754 366533
No 141
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=91.05 E-value=3 Score=36.39 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=76.1
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..|++..++-+..++-++||..+...+++. ++.+.+++.-+.+. .|.| .++.- |++|+...++.|..
T Consensus 5 ~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~--------~G~p---D~~~v-t~~em~~~~~~I~~ 72 (290)
T 2hjp_A 5 QALRAALDSGRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSAS--------YAVP---DANIL-SMSTHLEMMRAIAS 72 (290)
T ss_dssp HHHHHHHHHCCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHH--------TTSC---TTTCS-CHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHh--------CCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 456666677778888899999999999988 89888887533211 4666 45655 88888888777652
Q ss_pred cCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 85 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 85 ~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
. .++||++|-+..- |...-+...++..+..||.
T Consensus 73 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~~~~~v~~l~~aGa~ 105 (290)
T 2hjp_A 73 T-------------------------------VSIPLIADIDTGF----------------GNAVNVHYVVPQYEAAGAS 105 (290)
T ss_dssp T-------------------------------CSSCEEEECTTTT----------------SSHHHHHHHHHHHHHHTCS
T ss_pred c-------------------------------CCCCEEEECCCCC----------------CCHHHHHHHHHHHHHhCCe
Confidence 1 2468888877653 2222233445556779999
Q ss_pred EEEEeeecCC
Q 027740 165 GVFMEVHDDP 174 (219)
Q Consensus 165 GlvIEkH~t~ 174 (219)
|+-||--..|
T Consensus 106 gv~iED~~~~ 115 (290)
T 2hjp_A 106 AIVMEDKTFP 115 (290)
T ss_dssp EEEEECBCSS
T ss_pred EEEEcCCCCC
Confidence 9999976443
No 142
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=91.02 E-value=0.5 Score=43.26 Aligned_cols=83 Identities=19% Similarity=0.191 Sum_probs=62.7
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcccHHHHhhh-ccccccCCC-------------CCCCHHHHHHHHh----cCCeEEEe
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETVQCEEVGKV-ADIIQIPAF-------------LCRQTDLLVAAAK----TGKIINIK 65 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~-------------~~~n~~LL~~~a~----~gkPVils 65 (219)
++.+++.++++|++++. ++.+.+.+..+.+. +|++++|.. ..-+..++..+++ .+.|||-.
T Consensus 173 ~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~ 252 (400)
T 3ffs_A 173 IRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIAD 252 (400)
T ss_dssp HHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEE
T ss_pred HHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEec
Confidence 45677777778999995 99999999999998 999999521 1234566666654 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 027740 66 KGQFCASSVMVNSAEKVRLAGNPNVMV 92 (219)
Q Consensus 66 tG~~~t~~ei~~A~e~i~~~Gn~~i~L 92 (219)
=|.. +.+++..++. .|..-+++
T Consensus 253 GGI~-~~~di~kala----lGAd~V~v 274 (400)
T 3ffs_A 253 GGIR-YSGDIGKALA----VGASSVMI 274 (400)
T ss_dssp SCCC-SHHHHHHHHT----TTCSEEEE
T ss_pred CCCC-CHHHHHHHHH----cCCCEEEE
Confidence 9999 9999988754 47654443
No 143
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.99 E-value=0.71 Score=40.10 Aligned_cols=99 Identities=13% Similarity=0.070 Sum_probs=63.7
Q ss_pred HHHHHHHhcCCeEEEe--C-------CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-C
Q 027740 50 DLLVAAAKTGKIINIK--K-------GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-N 118 (219)
Q Consensus 50 ~LL~~~a~~gkPVils--t-------G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~ 118 (219)
+.++++-+.|+.|-.. + |.. +++++...++.+.+.|...|.|+.... +..|. ....-+..+++ + +
T Consensus 128 ~~v~~a~~~G~~V~~~l~~~~~~e~~~~~-~~~~~~~~~~~~~~~G~d~i~l~DT~G-~~~P~--~~~~lv~~l~~~~~~ 203 (302)
T 2ftp_A 128 PVLEAARQHQVRVRGYISCVLGCPYDGDV-DPRQVAWVARELQQMGCYEVSLGDTIG-VGTAG--ATRRLIEAVASEVPR 203 (302)
T ss_dssp HHHHHHHHTTCEEEEEEECTTCBTTTBCC-CHHHHHHHHHHHHHTTCSEEEEEESSS-CCCHH--HHHHHHHHHTTTSCG
T ss_pred HHHHHHHHCCCeEEEEEEEEeeCCcCCCC-CHHHHHHHHHHHHHcCCCEEEEeCCCC-CcCHH--HHHHHHHHHHHhCCC
Confidence 4455556677777421 1 223 678888888888888888777774332 12222 23455667776 6 6
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+|+++ +.|-. .| +-..-+++|+..||+ .|+.-..
T Consensus 204 ~~l~~-H~Hn~---------------~G---la~An~laAv~aGa~--~vd~tv~ 237 (302)
T 2ftp_A 204 ERLAG-HFHDT---------------YG---QALANIYASLLEGIA--VFDSSVA 237 (302)
T ss_dssp GGEEE-EEBCT---------------TS---CHHHHHHHHHHTTCC--EEEEBGG
T ss_pred CeEEE-EeCCC---------------cc---HHHHHHHHHHHhCCC--EEEeccc
Confidence 89988 77752 13 225567899999998 8887654
No 144
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=90.95 E-value=0.49 Score=40.41 Aligned_cols=84 Identities=10% Similarity=0.013 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCC----HHHHHHHHh-c-----CCeEEEeCCCCCCH
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQ----TDLLVAAAK-T-----GKIINIKKGQFCAS 72 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n----~~LL~~~a~-~-----gkPVilstG~~~t~ 72 (219)
-++.+.++++++|+.++.++++.++++...++ .+++-|..++.+. ...++.+.+ . +.|++-+.|.. |.
T Consensus 142 ~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~-s~ 220 (254)
T 1vc4_A 142 LTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYS-RK 220 (254)
T ss_dssp GHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEEESCCC-SH
T ss_pred HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEEEcCCC-CH
Confidence 36677788889999999999999999887777 8888888876553 333333322 1 78999999999 99
Q ss_pred HHHHHHHHHHHHcCCCcEEEE
Q 027740 73 SVMVNSAEKVRLAGNPNVMVC 93 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~i~L~ 93 (219)
+++... .. |..-+++.
T Consensus 221 ~dv~~l----~~-Ga~gvlVG 236 (254)
T 1vc4_A 221 EELKAL----EG-LFDAVLIG 236 (254)
T ss_dssp HHHHTT----TT-TCSEEEEC
T ss_pred HHHHHH----Hc-CCCEEEEe
Confidence 997753 45 76544443
No 145
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=90.92 E-value=1.6 Score=39.25 Aligned_cols=127 Identities=17% Similarity=0.075 Sum_probs=73.1
Q ss_pred CHHHHHHHHh-cCCeEEEe-CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-CCC--------------------CCC-
Q 027740 48 QTDLLVAAAK-TGKIINIK-KGQFCASSVMVNSAEKVRLAGNPNVMVCERGT-MFG--------------------YND- 103 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVils-tG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs-~~~--------------------~~~- 103 (219)
+.+.++++.+ +++||++| .|...+.++.. .+.+.|..-|.+--+|. ++. ...
T Consensus 175 ~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~----~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~ 250 (368)
T 3vkj_A 175 ALEKLRDISKELSVPIIVKESGNGISMETAK----LLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDW 250 (368)
T ss_dssp HHHHHHHHHTTCSSCEEEECSSSCCCHHHHH----HHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCCHHHHH----HHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccc
Confidence 6777888766 58999999 66666776644 44567876665532232 110 000
Q ss_pred CCccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCC
Q 027740 104 LIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDG 181 (219)
Q Consensus 104 ~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~ 181 (219)
...-..++...++ . ++||+.|..-. . ..-+..|.++||++++|=..+-.- +..
T Consensus 251 g~pt~~~l~~v~~~~~~ipvia~GGI~--------------------~--~~d~~kal~lGA~~v~ig~~~l~~--~~~- 305 (368)
T 3vkj_A 251 GVPTAASIMEVRYSVPDSFLVGSGGIR--------------------S--GLDAAKAIALGADIAGMALPVLKS--AIE- 305 (368)
T ss_dssp SCBHHHHHHHHHHHSTTCEEEEESSCC--------------------S--HHHHHHHHHHTCSEEEECHHHHHH--HHH-
T ss_pred cccHHHHHHHHHHHcCCCcEEEECCCC--------------------C--HHHHHHHHHcCCCEEEEcHHHHHH--Hhc-
Confidence 0001234556665 4 58998864321 1 233557788999998887542110 001
Q ss_pred CCCCChH----HHHHHHHHHHHHHHHhCCC
Q 027740 182 PTQWPLR----NLEELLEELVAIAKVSKGK 207 (219)
Q Consensus 182 ~~sl~p~----el~~lv~~ir~i~~~lg~~ 207 (219)
.++ -++.+.++++.+-..+|..
T Consensus 306 ----G~~~v~~~l~~l~~eL~~~m~~~G~~ 331 (368)
T 3vkj_A 306 ----GKESLEQFFRKIIFELKAAMMLTGSK 331 (368)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ----ChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 233 5667777787777777764
No 146
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=90.82 E-value=0.8 Score=38.42 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHhc-CCCeEe-eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHH
Q 027740 3 EGLKILEKVKIAY-DIPIVT-DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 3 ~gl~~L~~~~~~~-Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~ 79 (219)
.+++.+++.++++ ++.+-. ++++.++++...+. .|++-.|. .+.++++++.+.|.|+++ |.. |++|+..|.
T Consensus 63 ~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i~--G~~-t~~e~~~A~ 136 (225)
T 1mxs_A 63 HGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPG---ITEDILEAGVDSEIPLLP--GIS-TPSEIMMGY 136 (225)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSS---CCHHHHHHHHHCSSCEEC--EEC-SHHHHHHHH
T ss_pred cHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeCC---CCHHHHHHHHHhCCCEEE--eeC-CHHHHHHHH
Confidence 3566777788877 444433 67888899988888 99988774 578989999999999988 655 999998775
Q ss_pred HHHHHcCCCcEEEEeecCCCCCCCCCc-cchhHHHHHh-c-CCCEEE
Q 027740 80 EKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNLEWMRE-A-NCPVVA 123 (219)
Q Consensus 80 e~i~~~Gn~~i~L~~cgs~~~~~~~~~-nl~~i~~lk~-~-~~pV~~ 123 (219)
..|...+.+ ||.+ .+ -+..+..++. + ++|++.
T Consensus 137 ----~~Gad~vk~------FPa~--~~~G~~~lk~i~~~~~~ipvva 171 (225)
T 1mxs_A 137 ----ALGYRRFKL------FPAE--ISGGVAAIKAFGGPFGDIRFCP 171 (225)
T ss_dssp ----TTTCCEEEE------TTHH--HHTHHHHHHHHHTTTTTCEEEE
T ss_pred ----HCCCCEEEE------ccCc--cccCHHHHHHHHhhCCCCeEEE
Confidence 467766655 4421 12 3555666776 6 788854
No 147
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=90.80 E-value=1 Score=41.88 Aligned_cols=140 Identities=11% Similarity=0.032 Sum_probs=93.5
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhhc-cc-cccCCCCCCCH-HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKVA-DI-IQIPAFLCRQT-DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~v-d~-~kI~S~~~~n~-~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i 82 (219)
+.++.+.+..++|+.-+-+|++.++...+.+ +. --|.|..-.|+ .+...+++.+-||++... .++...+.++.+
T Consensus 145 ~vVk~V~e~~dvPL~IDS~dpevleaALea~a~~~plI~sat~dn~e~m~~lAa~y~~pVi~~~~---dl~~lkelv~~a 221 (446)
T 4djd_C 145 AAVASVAAATQLNLVLMADDPDVLKEALAGVADRKPLLYAATGANYEAMTALAKENNCPLAVYGN---GLEELAELVDKI 221 (446)
T ss_dssp HHHHHHHTTCCSEEEEECSCHHHHHHHHGGGGGGCCEEEEECTTTHHHHHHHHHHTTCCEEEECS---SHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEecCCHHHHHHHHHhhcCcCCeeEecchhhHHHHHHHHHHcCCcEEEEec---cHHHHHHHHHHH
Confidence 4456666789999999889998888877763 32 24555556687 477888889999999864 799999999999
Q ss_pred HHcCCCcEEEEeecC-CCCCCCCCccchhHHHH------HhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHH
Q 027740 83 RLAGNPNVMVCERGT-MFGYNDLIVDPRNLEWM------REANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIA 155 (219)
Q Consensus 83 ~~~Gn~~i~L~~cgs-~~~~~~~~~nl~~i~~l------k~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~ 155 (219)
.+.|.++| ++.-|+ .|.+.. +.|++ |..+ +.+++||+...+.. . ..+-...|
T Consensus 222 ~~~GI~~I-vLDPG~~g~~~t~-~~~~~-iRr~AL~~~d~~LgyPvi~~~sr~-----------------d-~~~E~t~A 280 (446)
T 4djd_C 222 VALGHKQL-VLDPGARETSRAI-ADFTQ-IRRLAIKKRFRSFGYPIIALTTAA-----------------N-PLDEVLQA 280 (446)
T ss_dssp HHTTCCCE-EEECCCCSHHHHH-HHHHH-HHHHHHHSCCGGGCSCBEEECCCS-----------------S-HHHHHHHH
T ss_pred HHCCCCcE-EECCCchhHHHHH-HHHHH-HHHHhhhccCcccCCCEEeccCCc-----------------c-HHHHHHHH
Confidence 99999877 667776 332211 11211 1222 22689998765542 1 22223344
Q ss_pred HHHHHcCCcEEEEeee
Q 027740 156 RTAIAVGVDGVFMEVH 171 (219)
Q Consensus 156 ~aAvalGA~GlvIEkH 171 (219)
-..++.|++ ++=.|
T Consensus 281 ~~~i~kga~--Iv~vh 294 (446)
T 4djd_C 281 VNYVTKYAS--LVVLR 294 (446)
T ss_dssp HHHHHTTCS--EEEES
T ss_pred HHHHHcCCe--EEEEc
Confidence 555888999 44445
No 148
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=90.77 E-value=3.6 Score=38.87 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=69.5
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
.+.+++.|+++|++++-. | .++...++ +|-+-+|..++.-. ..++.-..++.|.+|.. |++|+..|.+
T Consensus 58 a~~l~~l~~~~~v~liIN--D--~~dlA~~~gAdGVHLgq~dl~~~-~ar~~lg~~~iiG~S~h---t~eea~~A~~--- 126 (540)
T 3nl6_A 58 ALQIKELCHAHNVPLIIN--D--RIDVAMAIGADGIHVGQDDMPIP-MIRKLVGPDMVIGWSVG---FPEEVDELSK--- 126 (540)
T ss_dssp HHHHHHHHHHTTCCEEEC--S--CSHHHHHTTCSEEEECTTSSCHH-HHHHHHCTTSEEEEEEC---SHHHHHHHHH---
T ss_pred HHHHHHHHHhcCCEEEEe--C--cHHHHHHcCCCEEEEChhhcCHH-HHHHHhCCCCEEEEECC---CHHHHHHHHH---
Confidence 467888999999999974 2 56666677 88999999998643 34544455788999986 8999888754
Q ss_pred HcC---CCcEEEEeecCCCCCCCC------CccchhHHHHHh-c------CCCEEE
Q 027740 84 LAG---NPNVMVCERGTMFGYNDL------IVDPRNLEWMRE-A------NCPVVA 123 (219)
Q Consensus 84 ~~G---n~~i~L~~cgs~~~~~~~------~~nl~~i~~lk~-~------~~pV~~ 123 (219)
.| ...+.+ |.-|+++.. .+.+..+..+++ . ++||+.
T Consensus 127 -~G~~~aDYv~~---Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvA 178 (540)
T 3nl6_A 127 -MGPDMVDYIGV---GTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVG 178 (540)
T ss_dssp -TCC--CCEEEE---SCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred -cCCCCCCEEEE---cCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEE
Confidence 46 544444 333433221 134555655544 2 789876
No 149
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=90.73 E-value=1.6 Score=40.46 Aligned_cols=117 Identities=10% Similarity=-0.001 Sum_probs=73.7
Q ss_pred cCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCCC-------------CCccchhHHHHHh-c--CC
Q 027740 58 TGKI-INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYND-------------LIVDPRNLEWMRE-A--NC 119 (219)
Q Consensus 58 ~gkP-VilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~-~~~~-------------~~~nl~~i~~lk~-~--~~ 119 (219)
..+| |++|-....+.+|+...++.+.+.|..-|++.-++... .... ....++.+..+++ . ++
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 4689 99998887788899999999999997655544433221 0000 0113456677776 5 79
Q ss_pred CEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 027740 120 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 120 pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~ 199 (219)
||+.... .+. ..-+..++++||++++|=+-+-- . .|.-++++.+.++.
T Consensus 375 PVIg~GG--------------------I~s--~~DA~e~l~aGAd~Vqigrall~-----~-----gP~l~~~i~~~l~~ 422 (443)
T 1tv5_A 375 PIIASGG--------------------IFS--GLDALEKIEAGASVCQLYSCLVF-----N-----GMKSAVQIKRELNH 422 (443)
T ss_dssp CEEEESS--------------------CCS--HHHHHHHHHTTEEEEEESHHHHH-----H-----GGGHHHHHHHHHHH
T ss_pred cEEEECC--------------------CCC--HHHHHHHHHcCCCEEEEcHHHHh-----c-----ChHHHHHHHHHHHH
Confidence 9987422 211 45567888899997776443210 0 45577777777776
Q ss_pred HHHHhCC
Q 027740 200 IAKVSKG 206 (219)
Q Consensus 200 i~~~lg~ 206 (219)
.-...|-
T Consensus 423 ~l~~~G~ 429 (443)
T 1tv5_A 423 LLYQRGY 429 (443)
T ss_dssp HHHHHTC
T ss_pred HHHHhCC
Confidence 5555553
No 150
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.48 E-value=2.9 Score=42.14 Aligned_cols=166 Identities=11% Similarity=0.112 Sum_probs=91.0
Q ss_pred HHHHHHHhc-CCCeEeee---CCcccHHHHhh----h-cccccc-------------CCCCCCCHH----HHHHHHh-cC
Q 027740 7 ILEKVKIAY-DIPIVTDV---HETVQCEEVGK----V-ADIIQI-------------PAFLCRQTD----LLVAAAK-TG 59 (219)
Q Consensus 7 ~L~~~~~~~-Gi~~~tt~---~d~~~~~~l~~----~-vd~~kI-------------~S~~~~n~~----LL~~~a~-~g 59 (219)
.+.+..+.. +.+++..+ .++++...+.+ . +|++.| |+..+++.. +++++-+ ++
T Consensus 624 ~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~ 703 (1025)
T 1gte_A 624 SVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ 703 (1025)
T ss_dssp HHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC
Confidence 344444444 56777765 34444333322 2 566555 222224433 5555544 48
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec---------------------CCC-CCCCC---CccchhHHHH
Q 027740 60 KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG---------------------TMF-GYNDL---IVDPRNLEWM 114 (219)
Q Consensus 60 kPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cg---------------------s~~-~~~~~---~~nl~~i~~l 114 (219)
+||++|--.. .+++...++.+.+.|..-|++.-.. +.. ++... .+.++.+..+
T Consensus 704 ~Pv~vK~~~~--~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v 781 (1025)
T 1gte_A 704 IPFFAKLTPN--VTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTI 781 (1025)
T ss_dssp SCEEEEECSC--SSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHH
T ss_pred CceEEEeCCC--hHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHH
Confidence 9999997543 4566667777778888777663111 111 11100 0114567777
Q ss_pred Hh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHH
Q 027740 115 RE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEE 192 (219)
Q Consensus 115 k~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~ 192 (219)
++ . ++||+.+. |.+. ..-+..++++||++++|=+-+.- -++.-+++
T Consensus 782 ~~~~~~ipvi~~G--------------------GI~s--~~da~~~l~~Ga~~v~vg~~~l~----------~~~~~~~~ 829 (1025)
T 1gte_A 782 ARALPGFPILATG--------------------GIDS--AESGLQFLHSGASVLQVCSAVQN----------QDFTVIQD 829 (1025)
T ss_dssp HHHSTTCCEEEES--------------------SCCS--HHHHHHHHHTTCSEEEESHHHHT----------SCTTHHHH
T ss_pred HHHcCCCCEEEec--------------------CcCC--HHHHHHHHHcCCCEEEEeecccc----------CCccHHHH
Confidence 77 6 89998742 2221 34456777899999998654321 02245666
Q ss_pred HHHHHHHHHHHhCC
Q 027740 193 LLEELVAIAKVSKG 206 (219)
Q Consensus 193 lv~~ir~i~~~lg~ 206 (219)
+.++++.+-...|-
T Consensus 830 ~~~~l~~~l~~~G~ 843 (1025)
T 1gte_A 830 YCTGLKALLYLKSI 843 (1025)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 66666655554443
No 151
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=90.42 E-value=0.74 Score=42.93 Aligned_cols=94 Identities=15% Similarity=0.068 Sum_probs=71.5
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhcc----ccccCCCC--CCCHHHHHHHHhcC--CeEEEeCCCCCCHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVAD----IIQIPAFL--CRQTDLLVAAAKTG--KIINIKKGQFCASSV 74 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd----~~kI~S~~--~~n~~LL~~~a~~g--kPVilstG~~~t~~e 74 (219)
+-+..+++.+++++|.++=+||++++.+-..++.. -++|-..+ ++|..-++.+-+.+ --|++|-.+.+++.|
T Consensus 285 Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQIGgITE 364 (452)
T 3otr_A 285 KLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTE 364 (452)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHHH
T ss_pred HHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeeccccccHHH
Confidence 34567778889999999999999999998777622 25565655 46877676665544 478999999889999
Q ss_pred HHHHHHHHHHcCCCcEEEEeecC
Q 027740 75 MVNSAEKVRLAGNPNVMVCERGT 97 (219)
Q Consensus 75 i~~A~e~i~~~Gn~~i~L~~cgs 97 (219)
..++++..++.|- .+++-||..
T Consensus 365 alka~~lA~~~G~-~vmvshrSG 386 (452)
T 3otr_A 365 AIEACLLAQKSGW-GVQVSHRSG 386 (452)
T ss_dssp HHHHHHHHHHTTC-EEEEECCSS
T ss_pred HHHHHHHHHHcCC-eEEEeCCCC
Confidence 9999998888875 477777743
No 152
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=90.38 E-value=3.1 Score=37.12 Aligned_cols=128 Identities=18% Similarity=0.079 Sum_probs=74.5
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEE
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVA 123 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ 123 (219)
+.+.++++.+ +++||++|-- . +.+++..+ .+.|..-|++--.+... .+....++..+..+++ . ++||+.
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~-~-~~e~a~~a----~~~Gad~I~vs~~ggr~-~~~~~~~~~~l~~v~~~~~~~ipvia 285 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGV-I-TAEDARLA----VQHGAAGIIVSNHGARQ-LDYVPATIMALEEVVKAAQGRIPVFL 285 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECC-C-SHHHHHHH----HHTTCSEEEECCGGGTS-STTCCCHHHHHHHHHHHTTTSSCEEE
T ss_pred hHHHHHHHHHHhCCCEEEEec-C-CHHHHHHH----HHcCCCEEEECCCCCcc-CCCcccHHHHHHHHHHHhCCCCEEEE
Confidence 4555666655 6999999755 3 67776554 45687666553222210 1111246777888877 5 799988
Q ss_pred cCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 027740 124 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 203 (219)
Q Consensus 124 ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~ 203 (219)
+..-.. ..-+..+.++||++++|=+-+.-..+ ..+.. ---+-++.++++++..-..
T Consensus 286 ~GGI~~----------------------~~D~~k~l~~GAdaV~iGr~~l~~~~-~~G~~-gv~~~~~~l~~el~~~m~~ 341 (370)
T 1gox_A 286 DGGVRR----------------------GTDVFKALALGAAGVFIGRPVVFSLA-AEGEA-GVKKVLQMMRDEFELTMAL 341 (370)
T ss_dssp ESSCCS----------------------HHHHHHHHHHTCSEEEECHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCC----------------------HHHHHHHHHcCCCEEeecHHHHHHHh-hccHH-HHHHHHHHHHHHHHHHHHH
Confidence 644321 23455777899999998775321100 01100 0013466677777777777
Q ss_pred hCC
Q 027740 204 SKG 206 (219)
Q Consensus 204 lg~ 206 (219)
.|.
T Consensus 342 ~G~ 344 (370)
T 1gox_A 342 SGC 344 (370)
T ss_dssp HTC
T ss_pred hCC
Confidence 775
No 153
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=90.24 E-value=0.73 Score=39.36 Aligned_cols=122 Identities=12% Similarity=0.090 Sum_probs=70.5
Q ss_pred HHHHHHHHhc-CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec--------CCCC--------CCCC---Cccc
Q 027740 49 TDLLVAAAKT-GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG--------TMFG--------YNDL---IVDP 108 (219)
Q Consensus 49 ~~LL~~~a~~-gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cg--------s~~~--------~~~~---~~nl 108 (219)
.++++++-+. ++||++|.... +.++.+.++.+.+.|..-|++.... +..+ +... ...+
T Consensus 153 ~eii~~v~~~~~~pv~vk~~~~--~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~ 230 (311)
T 1ep3_A 153 AALVKACKAVSKVPLYVKLSPN--VTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVAL 230 (311)
T ss_dssp HHHHHHHHHHCSSCEEEEECSC--SSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEECCC--hHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHH
Confidence 4566666654 89999997533 2344455566677888766653211 1000 0000 0124
Q ss_pred hhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCCh
Q 027740 109 RNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPL 187 (219)
Q Consensus 109 ~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p 187 (219)
..+..+++ .++||+... |.+. ..-+..++++||||+++=+-+.- +|
T Consensus 231 ~~i~~i~~~~~ipvia~G--------------------GI~~--~~d~~~~l~~GAd~V~vg~~~l~-----------~p 277 (311)
T 1ep3_A 231 KLIHQVAQDVDIPIIGMG--------------------GVAN--AQDVLEMYMAGASAVAVGTANFA-----------DP 277 (311)
T ss_dssp HHHHHHHTTCSSCEEECS--------------------SCCS--HHHHHHHHHHTCSEEEECTHHHH-----------CT
T ss_pred HHHHHHHHhcCCCEEEEC--------------------CcCC--HHHHHHHHHcCCCEEEECHHHHc-----------Cc
Confidence 55666777 789998742 2211 34456777899999888765432 34
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 027740 188 RNLEELLEELVAIAKVSK 205 (219)
Q Consensus 188 ~el~~lv~~ir~i~~~lg 205 (219)
+-++++.+.++..-...|
T Consensus 278 ~~~~~i~~~l~~~~~~~g 295 (311)
T 1ep3_A 278 FVCPKIIDKLPELMDQYR 295 (311)
T ss_dssp THHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 567777777766544444
No 154
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=90.23 E-value=0.45 Score=41.19 Aligned_cols=60 Identities=13% Similarity=0.026 Sum_probs=50.5
Q ss_pred cHHHHh-hh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 28 QCEEVG-KV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 28 ~~~~l~-~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
+.+.+. +- +|++-|+...-...++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 58 ~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~ 119 (329)
T 3evn_A 58 KLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNL 119 (329)
T ss_dssp CHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTC
T ss_pred CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCC
Confidence 344443 33 8999999999999999999999999999999999999999988887776653
No 155
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=90.22 E-value=2.8 Score=36.80 Aligned_cols=130 Identities=20% Similarity=0.088 Sum_probs=70.4
Q ss_pred HHHHHHHHh-cCCeEEEeC-CCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCCC-CC-------------CCCCccchhH
Q 027740 49 TDLLVAAAK-TGKIINIKK-GQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTMF-GY-------------NDLIVDPRNL 111 (219)
Q Consensus 49 ~~LL~~~a~-~gkPVilst-G~~~t~~ei~~A~e~i~~~Gn~~i~L~-~cgs~~-~~-------------~~~~~nl~~i 111 (219)
.+.++++-+ +++||++|- |...+.+++..+ .+.|..-|++- |-|+.+ +. ..-......|
T Consensus 167 ~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a----~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l 242 (349)
T 1p0k_A 167 LKRIEQICSRVSVPVIVKEVGFGMSKASAGKL----YEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASL 242 (349)
T ss_dssp HHHHHHHHHHCSSCEEEEEESSCCCHHHHHHH----HHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCHHHHHHH----HHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHH
Confidence 456666653 689999995 665577665444 45687766665 533321 00 0001123445
Q ss_pred HHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHH
Q 027740 112 EWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRN 189 (219)
Q Consensus 112 ~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~e 189 (219)
..+++ . ++||+.+..-. . ..-+..++++||++++|=+-+.-... .+++. --.+.
T Consensus 243 ~~v~~~~~~ipvia~GGI~----------------~------~~d~~k~l~~GAd~V~iG~~~l~~~~-~~g~~-~~~~~ 298 (349)
T 1p0k_A 243 AEIRSEFPASTMIASGGLQ----------------D------ALDVAKAIALGASCTGMAGHFLKALT-DSGEE-GLLEE 298 (349)
T ss_dssp HHHHHHCTTSEEEEESSCC----------------S------HHHHHHHHHTTCSEEEECHHHHHHHH-HHHHH-HHHHH
T ss_pred HHHHHhcCCCeEEEECCCC----------------C------HHHHHHHHHcCCCEEEEcHHHHHHHh-hcCHH-HHHHH
Confidence 55655 4 79998863322 1 34455778899999988764321100 01100 00145
Q ss_pred HHHHHHHHHHHHHHhCC
Q 027740 190 LEELLEELVAIAKVSKG 206 (219)
Q Consensus 190 l~~lv~~ir~i~~~lg~ 206 (219)
++.++++++..-...|.
T Consensus 299 ~~~~~~~l~~~m~~~G~ 315 (349)
T 1p0k_A 299 IQLILEELKLIMTVLGA 315 (349)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 67777777777777775
No 156
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=90.16 E-value=7.7 Score=33.38 Aligned_cols=140 Identities=17% Similarity=0.166 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHh-cCCCeEe-eeCCc---cc----HHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCC-eEEEeCCCCC
Q 027740 3 EGLKILEKVKIA-YDIPIVT-DVHET---VQ----CEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGK-IINIKKGQFC 70 (219)
Q Consensus 3 ~gl~~L~~~~~~-~Gi~~~t-t~~d~---~~----~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gk-PVilstG~~~ 70 (219)
..+..+++.+++ ..+|++- +-+++ .. ++.+.+. +|.+-|+---.. -.++.+.+.+.|. +|.+-+..+
T Consensus 83 ~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t- 161 (271)
T 3nav_A 83 ICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTA- 161 (271)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTC-
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCC-
Confidence 457888888877 6788754 23332 12 2333344 777666644333 4677777888886 566777766
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCC---CCCCC-Ccc-chhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccC
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMF---GYNDL-IVD-PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVAS 144 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~---~~~~~-~~n-l~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~ 144 (219)
+.+.+...++ .+.. .+ -|+|.. +.... .-+ ...+..+|+ +++||++.
T Consensus 162 ~~eri~~i~~----~~~g-fi--Y~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vG-------------------- 214 (271)
T 3nav_A 162 SDETLRAVAQ----LGKG-YT--YLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLG-------------------- 214 (271)
T ss_dssp CHHHHHHHHH----HCCS-CE--EECCCC--------CCHHHHHHHHHHHHTTCCCEEEC--------------------
T ss_pred CHHHHHHHHH----HCCC-eE--EEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEE--------------------
Confidence 6666555444 2332 22 333332 22110 111 244666777 78999872
Q ss_pred CCCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 145 GGLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 145 ~G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
+|.+. +..+..+++.||||+++=+.+
T Consensus 215 fGIst--~e~~~~~~~~gADgvIVGSAi 240 (271)
T 3nav_A 215 FGISE--PAQVKQAIEAGAAGAISGSAV 240 (271)
T ss_dssp SSCCS--HHHHHHHHHTTCSEEEESHHH
T ss_pred CCCCC--HHHHHHHHHcCCCEEEECHHH
Confidence 12211 445556899999999986543
No 157
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=90.11 E-value=3.3 Score=37.21 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=70.0
Q ss_pred HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHH----------------------HHHHcCCCcEEEEeecCCCCC-----
Q 027740 49 TDLLVAAAKTGKIINIKKGQFCASSVMVNSAE----------------------KVRLAGNPNVMVCERGTMFGY----- 101 (219)
Q Consensus 49 ~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e----------------------~i~~~Gn~~i~L~~cgs~~~~----- 101 (219)
..+-+++++.|.|.++||-.+.+++|+..+.. ...+.|.+-++|.--....+.
T Consensus 89 ~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~ 168 (352)
T 3sgz_A 89 KSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDK 168 (352)
T ss_dssp HHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHH
T ss_pred HHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhh
Confidence 57788999999999999998889999987753 235567776666543321110
Q ss_pred -------------------------------CCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcc
Q 027740 102 -------------------------------NDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 149 (219)
Q Consensus 102 -------------------------------~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~ 149 (219)
-+..++...+.++|+ +++||++=-.. .
T Consensus 169 r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~------------------~--- 227 (352)
T 3sgz_A 169 RNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLPIILKGIL------------------T--- 227 (352)
T ss_dssp HHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCSCEEEEEEC------------------S---
T ss_pred hcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCCCEEEEecC------------------c---
Confidence 001244456888888 88998762111 1
Q ss_pred cHHHHHHHHHHcCCcEEEEeeec
Q 027740 150 LIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 150 ~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
...++.+...|+||+++--|-
T Consensus 228 --~e~A~~a~~~GaD~I~vsn~G 248 (352)
T 3sgz_A 228 --KEDAELAMKHNVQGIVVSNHG 248 (352)
T ss_dssp --HHHHHHHHHTTCSEEEECCGG
T ss_pred --HHHHHHHHHcCCCEEEEeCCC
Confidence 566889999999999887773
No 158
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=90.09 E-value=1.7 Score=37.71 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=58.2
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHH-Hhh-hccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEE-VGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~-~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
...++++++|++-.. .+.+. +++ -+|++-|+...-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 39 ~~~~~~~~~~~~~~~-----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~ 113 (344)
T 3ezy_A 39 RLREMKEKLGVEKAY-----KDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKK 113 (344)
T ss_dssp HHHHHHHHHTCSEEE-----SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcee-----CCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 456677788875222 23344 443 38999999999899999999999999999999999999998888776655
Q ss_pred cC
Q 027740 85 AG 86 (219)
Q Consensus 85 ~G 86 (219)
.|
T Consensus 114 ~g 115 (344)
T 3ezy_A 114 AD 115 (344)
T ss_dssp HT
T ss_pred hC
Confidence 54
No 159
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=90.05 E-value=0.76 Score=37.36 Aligned_cols=82 Identities=10% Similarity=0.094 Sum_probs=58.2
Q ss_pred HHHHHHHHhc--CCCeEeeeCCcccHHHHhhh-ccccccCCC-------CC----CCHHHHHHHHh-cCCeEEEeCCCCC
Q 027740 6 KILEKVKIAY--DIPIVTDVHETVQCEEVGKV-ADIIQIPAF-------LC----RQTDLLVAAAK-TGKIINIKKGQFC 70 (219)
Q Consensus 6 ~~L~~~~~~~--Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~-------~~----~n~~LL~~~a~-~gkPVilstG~~~ 70 (219)
..+.+.+++. |+.++.++++++++..+.+. +|++.++.. +. .++++++++.+ .+.||+..-|..
T Consensus 107 ~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~- 185 (223)
T 1y0e_A 107 DELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVI- 185 (223)
T ss_dssp HHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCC-
T ss_pred HHHHHHHHHhCCCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCC-
Confidence 4455555666 99999999999888887777 898876432 22 23556777765 589999999998
Q ss_pred CHHHHHHHHHHHHHcCCCcEEE
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMV 92 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L 92 (219)
|.+++..+.+ .|..-+++
T Consensus 186 ~~~~~~~~~~----~Gad~v~v 203 (223)
T 1y0e_A 186 TPDMYKRVMD----LGVHCSVV 203 (223)
T ss_dssp SHHHHHHHHH----TTCSEEEE
T ss_pred CHHHHHHHHH----cCCCEEEE
Confidence 8999887654 47543333
No 160
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.99 E-value=1.1 Score=38.51 Aligned_cols=135 Identities=17% Similarity=0.128 Sum_probs=82.6
Q ss_pred cCCCeEeeeCCcccHHHHhhh-ccccccC--CC--------CCC---CH----HHHHHHHhcCCeEE--EeCC------C
Q 027740 15 YDIPIVTDVHETVQCEEVGKV-ADIIQIP--AF--------LCR---QT----DLLVAAAKTGKIIN--IKKG------Q 68 (219)
Q Consensus 15 ~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~--S~--------~~~---n~----~LL~~~a~~gkPVi--lstG------~ 68 (219)
.++++..=.-+...++.+.+. ++.+-|. +. .++ |. +.++++-+.|.+|. |++- .
T Consensus 71 ~~~~v~~l~~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~ 150 (295)
T 1ydn_A 71 DGVRYSVLVPNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDG 150 (295)
T ss_dssp SSSEEEEECSSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTE
T ss_pred CCCEEEEEeCCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCC
Confidence 366654433455555555554 5554443 21 111 33 33566667899987 5542 1
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cC-CCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 69 FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN-CPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 69 ~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~-~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
..+++++...++.+.+.|...+.|+..... ..|. ...+-+..+++ +. +|+++ ..|-. .|
T Consensus 151 ~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~-~~P~--~~~~lv~~l~~~~~~~~l~~-H~Hn~---------------~G 211 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLGCHEVSLGDTIGR-GTPD--TVAAMLDAVLAIAPAHSLAG-HYHDT---------------GG 211 (295)
T ss_dssp ECCHHHHHHHHHHHHHHTCSEEEEEETTSC-CCHH--HHHHHHHHHHTTSCGGGEEE-EEBCT---------------TS
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEecCCCCC-cCHH--HHHHHHHHHHHhCCCCeEEE-EECCC---------------cc
Confidence 238899999998888999988888863322 2222 24455777777 65 88988 66652 13
Q ss_pred CcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 147 LRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 147 ~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
. -..-+++|+.+||+ .|+.-..
T Consensus 212 l---a~an~l~Ai~aG~~--~vd~sv~ 233 (295)
T 1ydn_A 212 R---ALDNIRVSLEKGLR--VFDASVG 233 (295)
T ss_dssp C---HHHHHHHHHHHTCC--EEEEBTT
T ss_pred h---HHHHHHHHHHhCCC--EEEeccc
Confidence 2 14457899999998 8887653
No 161
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=89.98 E-value=2.3 Score=37.46 Aligned_cols=143 Identities=12% Similarity=0.048 Sum_probs=87.3
Q ss_pred Hhhh-ccccccCCCCCCC--HHHHHHHHhcCCeEEEe-CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC------CC
Q 027740 32 VGKV-ADIIQIPAFLCRQ--TDLLVAAAKTGKIINIK-KGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF------GY 101 (219)
Q Consensus 32 l~~~-vd~~kI~S~~~~n--~~LL~~~a~~gkPVils-tG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~------~~ 101 (219)
|.++ ++.+-+|+.-... .+.++++.+..+.+-+. =... ..++++.|++.+...|.+.+.+.-..|.. +.
T Consensus 37 L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~r~-~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~ 115 (325)
T 3eeg_A 37 LDELGVDVIEAGFPVSSPGDFNSVVEITKAVTRPTICALTRA-KEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRS 115 (325)
T ss_dssp HHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCSSEEEEECCS-CHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----C
T ss_pred HHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCCCEEEEeecC-CHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCC
Confidence 3344 6666666554332 34566666643322222 2223 68899999999888888888877666531 11
Q ss_pred CC-CCcc--chhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCC
Q 027740 102 ND-LIVD--PRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAP 178 (219)
Q Consensus 102 ~~-~~~n--l~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~ 178 (219)
.. +.++ ...+...|+.+..|.|++-..- .-..+++..++.++..+|++-+ .+
T Consensus 116 s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~---------------~~~~~~~~~~~~~~~~~G~~~i----------~l 170 (325)
T 3eeg_A 116 TRENILEMAVAAVKQAKKVVHEVEFFCEDAG---------------RADQAFLARMVEAVIEAGADVV----------NI 170 (325)
T ss_dssp CCTTGGGTTHHHHHHHHTTSSEEEEEEETGG---------------GSCHHHHHHHHHHHHHHTCSEE----------EC
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEccccc---------------cchHHHHHHHHHHHHhcCCCEE----------Ee
Confidence 11 1111 1234444556777877543220 0124566778888999999821 26
Q ss_pred CCCCCCCChHHHHHHHHHHHHH
Q 027740 179 VDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 179 ~D~~~sl~p~el~~lv~~ir~i 200 (219)
+|-.-.++|.++.++++.+++.
T Consensus 171 ~DT~G~~~P~~v~~lv~~l~~~ 192 (325)
T 3eeg_A 171 PDTTGYMLPWQYGERIKYLMDN 192 (325)
T ss_dssp CBSSSCCCHHHHHHHHHHHHHH
T ss_pred cCccCCcCHHHHHHHHHHHHHh
Confidence 8988999999999999887753
No 162
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=89.96 E-value=2.5 Score=35.02 Aligned_cols=87 Identities=8% Similarity=-0.018 Sum_probs=54.0
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCC
Q 027740 50 DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSL 129 (219)
Q Consensus 50 ~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~ 129 (219)
+.++.+.++++||++-++.+ .+++ ++.+++.+...+++ ||.+. +...+..+.+.|+-+.+++.-+
T Consensus 130 ~~~~la~~~~lPv~iH~~~a--~~~~---~~il~~~~~~~~v~-H~~~g--------~~~~~~~~~~~g~~i~~~g~~~- 194 (272)
T 2y1h_A 130 RQIQLAKRLNLPVNVHSRSA--GRPT---INLLQEQGAEKVLL-HAFDG--------RPSVAMEGVRAGYFFSIPPSII- 194 (272)
T ss_dssp HHHHHHHHHTCCEEEECTTC--HHHH---HHHHHHTTCCSEEE-ETCCS--------CHHHHHHHHHTTCEEEECGGGG-
T ss_pred HHHHHHHHhCCcEEEEeCCc--HHHH---HHHHHhCCCCCEEE-EccCC--------CHHHHHHHHHCCCEEEECCccc-
Confidence 66777888999999999865 4554 45566666656766 99442 2233333333577777742211
Q ss_pred CCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 130 QQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 130 ~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
.+ ..+-.++...+.+.+++|+=
T Consensus 195 ---------------~~-----~~~~~~~~~~~~drll~eTD 216 (272)
T 2y1h_A 195 ---------------RS-----GQKQKLVKQLPLTSICLETD 216 (272)
T ss_dssp ---------------TC-----HHHHHHHHHSCGGGEEECCC
T ss_pred ---------------Cc-----HHHHHHHHhCCHHHEEEecC
Confidence 12 23444556678888999973
No 163
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=89.96 E-value=0.55 Score=39.25 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=77.3
Q ss_pred HHHHHHHHHHhcCCCeEeee--CCcc-cHHHHhhh-ccccccCCC--CCC-CHHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDV--HETV-QCEEVGKV-ADIIQIPAF--LCR-QTDLLVAAAKTGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~--~d~~-~~~~l~~~-vd~~kI~S~--~~~-n~~LL~~~a~~gkPVilstG~~~t~~ei~ 76 (219)
|++.+++.++...+++.... .|++ -++.+.+. +|.+-++.. ... -...++++-+.|+-+.++..+. |..|..
T Consensus 50 g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~-t~~e~~ 128 (230)
T 1tqj_A 50 GPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPS-TPLDFL 128 (230)
T ss_dssp CHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTT-CCGGGG
T ss_pred hHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCC-CcHHHH
Confidence 45566666554444443222 3432 35666666 888866655 222 3567888888899999999777 766554
Q ss_pred HHHHHHHHcCCCcEEEEeecCCCCC-CCC---CccchhHHHHHh-c-----CCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 77 NSAEKVRLAGNPNVMVCERGTMFGY-NDL---IVDPRNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 77 ~A~e~i~~~Gn~~i~L~~cgs~~~~-~~~---~~nl~~i~~lk~-~-----~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
.+ +.. +. +.+++- +.+|. ... ..-+..|..+|+ . ++||.+| +|
T Consensus 129 ~~---~~~-~~-D~v~~m--sv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~--------------------GG 181 (230)
T 1tqj_A 129 EY---VLP-VC-DLILIM--SVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVD--------------------GG 181 (230)
T ss_dssp TT---TGG-GC-SEEEEE--SSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEE--------------------SS
T ss_pred HH---HHh-cC-CEEEEE--EeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEE--------------------CC
Confidence 33 222 34 344433 33221 111 123455666665 4 7899886 22
Q ss_pred CcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 147 LRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 147 ~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
.. ..-+....+.||||+++=+-+.
T Consensus 182 I~---~~~~~~~~~aGad~vvvGSai~ 205 (230)
T 1tqj_A 182 LK---PNNTWQVLEAGANAIVAGSAVF 205 (230)
T ss_dssp CC---TTTTHHHHHHTCCEEEESHHHH
T ss_pred cC---HHHHHHHHHcCCCEEEECHHHH
Confidence 21 1123355778999988876543
No 164
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=89.94 E-value=0.6 Score=40.77 Aligned_cols=55 Identities=16% Similarity=0.038 Sum_probs=47.4
Q ss_pred Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 32 VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 32 l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
+++- +|++-|.+-.-.+.++..++.+.||+|++.+.++.|++|....++..++.|
T Consensus 61 l~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g 116 (349)
T 3i23_A 61 LTDPEIELITICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKG 116 (349)
T ss_dssp HSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTT
T ss_pred hcCCCCCEEEEeCCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcC
Confidence 3443 899999999999999999999999999999999999999888887665544
No 165
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=89.94 E-value=0.88 Score=42.02 Aligned_cols=74 Identities=4% Similarity=-0.049 Sum_probs=59.7
Q ss_pred HHHHHHHhcCCC---eEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcC------CeEEEeCCCCCCHHHH
Q 027740 7 ILEKVKIAYDIP---IVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTG------KIINIKKGQFCASSVM 75 (219)
Q Consensus 7 ~L~~~~~~~Gi~---~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~g------kPVilstG~~~t~~ei 75 (219)
..+++++++|++ +.+ +.+. +++- +|++-|.+.+-.+.++..++.+.| |+|++.+.++.+++|.
T Consensus 81 ~a~~~a~~~g~~~~~~~~------d~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea 154 (479)
T 2nvw_A 81 SSLQTIEQLQLKHATGFD------SLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQA 154 (479)
T ss_dssp HHHHHHHHTTCTTCEEES------CHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHH
T ss_pred HHHHHHHHcCCCcceeeC------CHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHH
Confidence 456677888886 332 3444 4443 999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHcC
Q 027740 76 VNSAEKVRLAG 86 (219)
Q Consensus 76 ~~A~e~i~~~G 86 (219)
...++..++.|
T Consensus 155 ~~l~~~a~~~g 165 (479)
T 2nvw_A 155 EELYSISQQRA 165 (479)
T ss_dssp HHHHHHHHTCT
T ss_pred HHHHHHHHHcC
Confidence 99888877766
No 166
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=89.87 E-value=0.81 Score=40.22 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=56.2
Q ss_pred HHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 11 VKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 11 ~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
.++++|+.+. .+.+.+ ++- +|++-|.+-+-...++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 45 ~a~~~g~~~~------~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~ 117 (359)
T 3e18_A 45 AAAQKGLKIY------ESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNK 117 (359)
T ss_dssp HHHTTTCCBC------SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCcee------CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCC
Confidence 4567787543 344444 433 8999999999999999999999999999999999999999988886665543
No 167
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=89.85 E-value=3.6 Score=34.67 Aligned_cols=151 Identities=13% Similarity=0.147 Sum_probs=95.6
Q ss_pred HHHHHHHhcCCCeEeeeCCccc---------HHHHhhh-ccccccCCCC--CCC---HHHHHHHHhcCCeEEEeCCCCCC
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQ---------CEEVGKV-ADIIQIPAFL--CRQ---TDLLVAAAKTGKIINIKKGQFCA 71 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~---------~~~l~~~-vd~~kI~S~~--~~n---~~LL~~~a~~gkPVilstG~~~t 71 (219)
.|.++++..++++..-=.|+.+ +.++.++ +++.-|+-.+ ... -.+++.+-+.|+-+++..|-
T Consensus 47 ~L~~v~~~~~i~v~aQdv~~~~~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge--- 123 (226)
T 1w0m_A 47 ELGLVSQSVDIPVYAQGADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPD--- 123 (226)
T ss_dssp GHHHHHTTCSSCBEESCCSBSSCSSCTTCCBHHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESS---
T ss_pred HHHHHHHhcCCceEeeECChhhCCCccCCCCHHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCC---
Confidence 4566666678999996688888 9999999 9999998887 332 34556666789999999994
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEeecCCCCCC----CCCcc-chhHHH-HHh--cCCCEEEcCCCCCCCCCCCccCCCCcc
Q 027740 72 SSVMVNSAEKVRLAGNPNVMVCERGTMFGYN----DLIVD-PRNLEW-MRE--ANCPVVADVTHSLQQPAGKKLDGGGVA 143 (219)
Q Consensus 72 ~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~----~~~~n-l~~i~~-lk~--~~~pV~~ds~Hs~~~~~~~~~~~~~~~ 143 (219)
..|...+ ...+ +.++-.+-.-.-++. ..+.| +..... +|. .+++|+|-++-.
T Consensus 124 ~~e~~~~----~~~~-~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~--------------- 183 (226)
T 1w0m_A 124 PRTSLAA----AALG-PHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIE--------------- 183 (226)
T ss_dssp HHHHHHH----HHTC-CSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCC---------------
T ss_pred HHHHHHH----hcCC-CCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCC---------------
Confidence 4554433 2223 346655543221222 12233 333332 344 357888754433
Q ss_pred CCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 027740 144 SGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 144 ~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~ 199 (219)
. ..........|+||++| +.++|.+++|.++++.+..
T Consensus 184 --~-----~n~~~~~~~~giDG~LV------------G~a~l~a~~~~~~i~~l~~ 220 (226)
T 1w0m_A 184 --S-----GDDVAAALRLGTRGVLL------------ASAAVKAKDPYAKIVELAK 220 (226)
T ss_dssp --S-----HHHHHHHHHTTCSEEEE------------CHHHHTCSSHHHHHHHHHH
T ss_pred --c-----HHHHHHHHhCCCCEEEE------------CHHHHCCcCHHHHHHHHHH
Confidence 1 34455567889999988 4566677777777766544
No 168
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=89.84 E-value=1.4 Score=41.05 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=59.9
Q ss_pred HHHHHHHHHhc-CCCeEe-eeCCcccHHHHhhh-ccccccCCC---C----------CCCHHHHHHHH----hcCCeEEE
Q 027740 5 LKILEKVKIAY-DIPIVT-DVHETVQCEEVGKV-ADIIQIPAF---L----------CRQTDLLVAAA----KTGKIINI 64 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~---~----------~~n~~LL~~~a----~~gkPVil 64 (219)
++.++++++++ +++++. .+.+.+.+..+.+. +|+++++.. . .-+..++..++ +.+.|||-
T Consensus 260 ~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa 339 (496)
T 4fxs_A 260 LQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA 339 (496)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEE
Confidence 56788888888 888866 79999999999998 999998511 1 22444455554 45899999
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCC
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~ 88 (219)
+-|.. +.+++..|+. .|..
T Consensus 340 ~GGI~-~~~di~kala----~GAd 358 (496)
T 4fxs_A 340 DGGIR-FSGDISKAIA----AGAS 358 (496)
T ss_dssp ESCCC-SHHHHHHHHH----TTCS
T ss_pred eCCCC-CHHHHHHHHH----cCCC
Confidence 99999 9999998854 4764
No 169
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=89.83 E-value=6.4 Score=33.35 Aligned_cols=116 Identities=22% Similarity=0.298 Sum_probs=67.6
Q ss_pred HHHHHHHHhc---CCeEE-EeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEE
Q 027740 49 TDLLVAAAKT---GKIIN-IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVA 123 (219)
Q Consensus 49 ~~LL~~~a~~---gkPVi-lstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ 123 (219)
..+++++-+. |+.++ +.+. +.+++..+ .+.|..-| +..+..++......+...+.++++ .++||+.
T Consensus 113 ~~~~~~a~~~~~~g~~vi~~~~~---~~~~a~~~----~~~gad~v--~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv 183 (264)
T 1xm3_A 113 VETLKASEQLLEEGFIVLPYTSD---DVVLARKL----EELGVHAI--MPGASPIGSGQGILNPLNLSFIIEQAKVPVIV 183 (264)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECS---CHHHHHHH----HHHTCSCB--EECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE
T ss_pred HHHHHHHHHHHCCCeEEEEEcCC---CHHHHHHH----HHhCCCEE--EECCcccCCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 3667777666 87777 6654 55655444 34566544 333333333322234567777877 7899987
Q ss_pred cCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 027740 124 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 203 (219)
Q Consensus 124 ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~ 203 (219)
.. |.+. +.-+..+.++||||+++=+.+.-. .| +.+.+++|++.++....+
T Consensus 184 ~g--------------------GI~t--~eda~~~~~~GAdgViVGSAi~~a---~d-----p~~~~~~l~~~v~~~~~~ 233 (264)
T 1xm3_A 184 DA--------------------GIGS--PKDAAYAMELGADGVLLNTAVSGA---DD-----PVKMARAMKLAVEAGRLS 233 (264)
T ss_dssp ES--------------------CCCS--HHHHHHHHHTTCSEEEESHHHHTS---SS-----HHHHHHHHHHHHHHHHHH
T ss_pred Ee--------------------CCCC--HHHHHHHHHcCCCEEEEcHHHhCC---CC-----HHHHHHHHHHHHHHHHHH
Confidence 41 3211 344667789999999988764321 11 234667777766655544
No 170
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=89.72 E-value=0.86 Score=39.49 Aligned_cols=73 Identities=19% Similarity=0.048 Sum_probs=55.9
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhh--hccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGK--VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~--~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
...+.++++|..+. .+.+.+.+ -+|++-|....-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 41 ~~~~~a~~~g~~~~------~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~ 114 (344)
T 3euw_A 41 GAQRLAEANGAEAV------ASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGD 114 (344)
T ss_dssp HHHHHHHTTTCEEE------SSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGG
T ss_pred HHHHHHHHcCCcee------CCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHh
Confidence 34566777785443 24444443 38999999999999999999999999999999999999998887765443
Q ss_pred c
Q 027740 85 A 85 (219)
Q Consensus 85 ~ 85 (219)
.
T Consensus 115 ~ 115 (344)
T 3euw_A 115 G 115 (344)
T ss_dssp G
T ss_pred c
Confidence 3
No 171
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=89.72 E-value=5.7 Score=38.95 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=65.9
Q ss_pred HHHHHhcCCeEE--EeCC---------CCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-C
Q 027740 52 LVAAAKTGKIIN--IKKG---------QFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-N 118 (219)
Q Consensus 52 L~~~a~~gkPVi--lstG---------~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~ 118 (219)
++++-+.|+-|. ++.. .. +++.+...++.+.+.|...|.||.-... -.|. .+ ..-+..+|+ + +
T Consensus 230 i~~ak~~G~~v~~~i~~~~d~~dp~r~~~-~~e~~~~~a~~l~~~Ga~~I~l~DT~G~-~~P~-~v-~~lV~~lk~~~p~ 305 (718)
T 3bg3_A 230 MEAAGSAGGVVEAAISYTGDVADPSRTKY-SLQYYMGLAEELVRAGTHILCIKDMAGL-LKPT-AC-TMLVSSLRDRFPD 305 (718)
T ss_dssp HHHHHTTTSEEEEEEECCSCTTCTTCCTT-CHHHHHHHHHHHHHHTCSEEEEECTTSC-CCHH-HH-HHHHHHHHHHSTT
T ss_pred HHHHHHcCCeEEEEEEeeccccCCCCCCC-CHHHHHHHHHHHHHcCCCEEEEcCcCCC-cCHH-HH-HHHHHHHHHhCCC
Confidence 444555677655 3333 23 7899999999999999987878775442 1222 12 244667777 7 8
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+||++ +.|-. .| +...-+++|+.+||+ .|+.-..
T Consensus 306 ~~I~~-H~Hnd---------------~G---lAvANslaAveAGa~--~VD~ti~ 339 (718)
T 3bg3_A 306 LPLHI-HTHDT---------------SG---AGVAAMLACAQAGAD--VVDVAAD 339 (718)
T ss_dssp CCEEE-ECCCT---------------TS---CHHHHHHHHHHTTCS--EEEEBCG
T ss_pred CeEEE-EECCC---------------cc---HHHHHHHHHHHhCCC--EEEecCc
Confidence 99999 88863 23 225568899999999 8887654
No 172
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=89.71 E-value=5.7 Score=33.17 Aligned_cols=121 Identities=13% Similarity=0.082 Sum_probs=70.8
Q ss_pred cccHHHHhhh-cccc--ccCCCCCCC---H----HHHHHHHhcCCeEEEeCC---CC----CCHHHHHHHHHHHHHcCCC
Q 027740 26 TVQCEEVGKV-ADII--QIPAFLCRQ---T----DLLVAAAKTGKIINIKKG---QF----CASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 26 ~~~~~~l~~~-vd~~--kI~S~~~~n---~----~LL~~~a~~gkPVilstG---~~----~t~~ei~~A~e~i~~~Gn~ 88 (219)
.++++.+.+. ++++ ++-...... . .+.+.+.+.|.|+++..+ .. .+.+++..+++...+.|..
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad 181 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGAD 181 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCC
Confidence 4566666666 7776 432222221 1 234444456999999762 21 3678888887888888875
Q ss_pred cEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEE
Q 027740 89 NVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVF 167 (219)
Q Consensus 89 ~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~Glv 167 (219)
++.++ | + .|+..+..+++ .++||+.-+.-. ....+-+......+...||+|+.
T Consensus 182 -~i~~~----~--~---~~~~~l~~i~~~~~ipvva~GGi~----------------~~~~~~~~~~~~~~~~~Ga~gv~ 235 (273)
T 2qjg_A 182 -IVKTS----Y--T---GDIDSFRDVVKGCPAPVVVAGGPK----------------TNTDEEFLQMIKDAMEAGAAGVA 235 (273)
T ss_dssp -EEEEC----C--C---SSHHHHHHHHHHCSSCEEEECCSC----------------CSSHHHHHHHHHHHHHHTCSEEE
T ss_pred -EEEEC----C--C---CCHHHHHHHHHhCCCCEEEEeCCC----------------CCCHHHHHHHHHHHHHcCCcEEE
Confidence 44443 2 2 47788888877 789997621111 11111112234566789999988
Q ss_pred Eeeec
Q 027740 168 MEVHD 172 (219)
Q Consensus 168 IEkH~ 172 (219)
+=+-+
T Consensus 236 vg~~i 240 (273)
T 2qjg_A 236 VGRNI 240 (273)
T ss_dssp CCHHH
T ss_pred eeHHh
Confidence 75543
No 173
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=89.68 E-value=0.96 Score=40.46 Aligned_cols=122 Identities=14% Similarity=0.012 Sum_probs=73.1
Q ss_pred HHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeec------------C-------C---C-CCCCCC
Q 027740 50 DLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERG------------T-------M---F-GYNDLI 105 (219)
Q Consensus 50 ~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cg------------s-------~---~-~~~~~~ 105 (219)
++++++-+ +++||.+|-....+..|+..+++.....| +.++.+. . . | +.+...
T Consensus 183 ~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~---i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p 259 (345)
T 3oix_A 183 QILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYP---LTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKP 259 (345)
T ss_dssp HHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSC---CSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHH
T ss_pred HHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCc---eEEEEeecccccceeeccCccccccccccCCcCCccccH
Confidence 34444433 47999999998878888888877664433 3333222 1 0 1 111112
Q ss_pred ccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCC
Q 027740 106 VDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGP 182 (219)
Q Consensus 106 ~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~ 182 (219)
+.++.+..+++ . ++||+.+. |.+. ..-+...+.+||++++|=+-+-.
T Consensus 260 ~a~~~v~~i~~~~~~~ipIIg~G--------------------GI~s--~~da~~~l~aGAd~V~igra~~~-------- 309 (345)
T 3oix_A 260 TALANVHAFYKRLNPSIQIIGTG--------------------GVXT--GRDAFEHILCGASMVQIGTALHQ-------- 309 (345)
T ss_dssp HHHHHHHHHHTTSCTTSEEEEES--------------------SCCS--HHHHHHHHHHTCSEEEESHHHHH--------
T ss_pred HHHHHHHHHHHHcCCCCcEEEEC--------------------CCCC--hHHHHHHHHhCCCEEEEChHHHh--------
Confidence 34567778877 6 69998742 2221 34456677899998877554211
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCC
Q 027740 183 TQWPLRNLEELLEELVAIAKVSKG 206 (219)
Q Consensus 183 ~sl~p~el~~lv~~ir~i~~~lg~ 206 (219)
-.|.-++++.+.++..-...|-
T Consensus 310 --~gP~~~~~i~~~L~~~l~~~G~ 331 (345)
T 3oix_A 310 --EGPQIFKRITKELXAIMTEKGY 331 (345)
T ss_dssp --HCTHHHHHHHHHHHHHHHHHTC
T ss_pred --cChHHHHHHHHHHHHHHHHcCC
Confidence 1466788888888776555553
No 174
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=89.42 E-value=1.5 Score=39.67 Aligned_cols=61 Identities=15% Similarity=0.082 Sum_probs=52.6
Q ss_pred ccHHHHh-hh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 27 VQCEEVG-KV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 27 ~~~~~l~-~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
.+.+.+. +- +|++-|.+-.-.+.++..++.+.||+|++.+.++.|++|....++..++.|.
T Consensus 81 ~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~ 143 (444)
T 2ixa_A 81 DDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGV 143 (444)
T ss_dssp TTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCC
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCC
Confidence 3556554 33 9999999999999999999999999999999999999999999888877764
No 175
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=89.32 E-value=9.4 Score=33.29 Aligned_cols=110 Identities=16% Similarity=0.164 Sum_probs=67.1
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
+.|++..++-+..++-++||..+...+++. +|.+.++|.-+.+ ..|.| .++.- |++|+...++.|..
T Consensus 9 ~~lr~l~~~~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~--------~lG~p---D~~~v-t~~em~~~~~~I~~ 76 (295)
T 1s2w_A 9 TQLKQMLNSKDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSA--------QLGVR---DSNEA-SWTQVVEVLEFMSD 76 (295)
T ss_dssp HHHHHHHHSSSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHH--------TC-------------CHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHH--------hCCCC---CCCCC-CHHHHHHHHHHHHh
Confidence 356666666677788899999999988887 8888888753321 23444 23444 77777777666643
Q ss_pred cCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 85 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 85 ~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
. .++||+.|-+..- |...-+...++..+..||.
T Consensus 77 ~-------------------------------~~~PviaD~d~Gy----------------g~~~~v~~~v~~l~~aGaa 109 (295)
T 1s2w_A 77 A-------------------------------SDVPILLDADTGY----------------GNFNNARRLVRKLEDRGVA 109 (295)
T ss_dssp T-------------------------------CSSCEEEECCSSC----------------SSHHHHHHHHHHHHHTTCC
T ss_pred c-------------------------------CCCCEEecCCCCC----------------CCHHHHHHHHHHHHHcCCc
Confidence 1 2578888877643 2222233334455689999
Q ss_pred EEEEeeecCC
Q 027740 165 GVFMEVHDDP 174 (219)
Q Consensus 165 GlvIEkH~t~ 174 (219)
|+-||--..|
T Consensus 110 gv~iED~~~~ 119 (295)
T 1s2w_A 110 GACLEDKLFP 119 (295)
T ss_dssp EEEEECBCC-
T ss_pred EEEECCCCCC
Confidence 9999976443
No 176
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=89.27 E-value=3.5 Score=34.97 Aligned_cols=109 Identities=20% Similarity=0.240 Sum_probs=62.2
Q ss_pred hcCCeEEEe---CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC--C----CCcc-------------chhHHHH
Q 027740 57 KTGKIINIK---KGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN--D----LIVD-------------PRNLEWM 114 (219)
Q Consensus 57 ~~gkPVils---tG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~--~----~~~n-------------l~~i~~l 114 (219)
+.+++.++- .|-- +++++...++.+.+.|..-|-| |.-|.-| + ...+ +..+..+
T Consensus 13 ~~~~~~~i~~i~~g~p-~~~~~~~~~~~l~~~G~D~IEl---G~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~i 88 (262)
T 2ekc_A 13 EKREKALVSYLMVGYP-DYETSLKAFKEVLKNGTDILEI---GFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETL 88 (262)
T ss_dssp HHTBCEEEEEEETTSS-CHHHHHHHHHHHHHTTCSEEEE---ECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred hcCCceEEEEecCCCC-ChHHHHHHHHHHHHcCCCEEEE---CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 345555444 7766 9999999999999988763333 5533111 0 0011 1225556
Q ss_pred Hh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHH
Q 027740 115 RE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEE 192 (219)
Q Consensus 115 k~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~ 192 (219)
|+ + ++||++- +..+ | .-..| +......+.+.|++|+++ | | +++++.+.
T Consensus 89 r~~~~~~Pi~~m-~y~n--~---------v~~~g----~~~f~~~~~~aG~dgvii-----~-----d----l~~ee~~~ 138 (262)
T 2ekc_A 89 RKEFPDIPFLLM-TYYN--P---------IFRIG----LEKFCRLSREKGIDGFIV-----P-----D----LPPEEAEE 138 (262)
T ss_dssp HHHCTTSCEEEE-CCHH--H---------HHHHC----HHHHHHHHHHTTCCEEEC-----T-----T----CCHHHHHH
T ss_pred HhhcCCCCEEEE-ecCc--H---------HHHhh----HHHHHHHHHHcCCCEEEE-----C-----C----CCHHHHHH
Confidence 66 6 8999882 2221 0 00001 134456788999999877 2 2 44577777
Q ss_pred HHHHHHH
Q 027740 193 LLEELVA 199 (219)
Q Consensus 193 lv~~ir~ 199 (219)
+++.+++
T Consensus 139 ~~~~~~~ 145 (262)
T 2ekc_A 139 LKAVMKK 145 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666554
No 177
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=89.20 E-value=0.95 Score=40.63 Aligned_cols=74 Identities=16% Similarity=0.116 Sum_probs=55.8
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCC----HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQ----TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n----~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~ 81 (219)
...+++++++|+++.++.-+. ++ -+|+.-|...+-.+ .++.+++-+.||+|++.+.+ |.+|...-++.
T Consensus 43 ~~a~~~a~~~gv~~~~~~~~l-----~~-~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl--~~~ea~~l~~~ 114 (372)
T 4gmf_A 43 ARSRELAHAFGIPLYTSPEQI-----TG-MPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPL--HPDDISSLQTL 114 (372)
T ss_dssp HHHHHHHHHTTCCEESSGGGC-----CS-CCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEECCHHHH-----hc-CCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCC--CHHHHHHHHHH
Confidence 456788999999976654332 22 37777787777766 88899999999999999995 78999888887
Q ss_pred HHHcCC
Q 027740 82 VRLAGN 87 (219)
Q Consensus 82 i~~~Gn 87 (219)
-+++|.
T Consensus 115 A~~~g~ 120 (372)
T 4gmf_A 115 AQEQGC 120 (372)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 777664
No 178
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=89.13 E-value=1.1 Score=38.44 Aligned_cols=60 Identities=13% Similarity=0.040 Sum_probs=52.0
Q ss_pred cHHHHh-hh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 28 QCEEVG-KV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 28 ~~~~l~-~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
+.+.+. +- +|++-|.+-+-.+.++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 56 ~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 117 (294)
T 1lc0_A 56 SLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGR 117 (294)
T ss_dssp CHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHhcCCCCCEEEEeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 555544 33 9999999999999999999999999999999999999999999988877764
No 179
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=88.98 E-value=1.2 Score=38.28 Aligned_cols=77 Identities=13% Similarity=0.040 Sum_probs=58.0
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
..+++++++|++.. ..+.. +.+.+-+|++-|+...-...++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 39 ~~~~~a~~~g~~~~--~~~~~--~~l~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g 114 (323)
T 1xea_A 39 VLGTLATRYRVSAT--CTDYR--DVLQYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHH 114 (323)
T ss_dssp HHHHHHHHTTCCCC--CSSTT--GGGGGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCcc--ccCHH--HHhhcCCCEEEEECCchhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcC
Confidence 45667788887631 12222 233334899999999888899998898999999999999999999888888776665
Q ss_pred C
Q 027740 87 N 87 (219)
Q Consensus 87 n 87 (219)
.
T Consensus 115 ~ 115 (323)
T 1xea_A 115 Q 115 (323)
T ss_dssp C
T ss_pred C
Confidence 4
No 180
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=88.93 E-value=1.5 Score=39.57 Aligned_cols=82 Identities=18% Similarity=0.248 Sum_probs=60.2
Q ss_pred HHHHHHHHHhc-CCCeEe-eeCCcccHHHHhhh-ccccccC---CCC----------CCCHHHHHHHH----hcCCeEEE
Q 027740 5 LKILEKVKIAY-DIPIVT-DVHETVQCEEVGKV-ADIIQIP---AFL----------CRQTDLLVAAA----KTGKIINI 64 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~---S~~----------~~n~~LL~~~a----~~gkPVil 64 (219)
++.+++.++.+ +++++. ++.+++++..+.+. +|++++| ... ..+..++..++ ..+.|||-
T Consensus 137 ~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA 216 (366)
T 4fo4_A 137 LQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA 216 (366)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEE
Confidence 45677777777 888765 79999999999998 9999994 112 23445566555 46899999
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCCcEE
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNPNVM 91 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~~i~ 91 (219)
.=|.. +..++..|+. .|..-++
T Consensus 217 ~GGI~-~~~di~kala----~GAd~V~ 238 (366)
T 4fo4_A 217 DGGIR-FSGDISKAIA----AGASCVM 238 (366)
T ss_dssp ESCCC-SHHHHHHHHH----TTCSEEE
T ss_pred eCCCC-CHHHHHHHHH----cCCCEEE
Confidence 99998 9999887754 4765343
No 181
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=88.88 E-value=1.3 Score=39.77 Aligned_cols=81 Identities=19% Similarity=0.271 Sum_probs=58.7
Q ss_pred HHHHHHHHHhc-CCCeEe-eeCCcccHHHHhhh-ccccccCC-------------CCCCCHHHHHHHHh----cCCeEEE
Q 027740 5 LKILEKVKIAY-DIPIVT-DVHETVQCEEVGKV-ADIIQIPA-------------FLCRQTDLLVAAAK----TGKIINI 64 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S-------------~~~~n~~LL~~~a~----~gkPVil 64 (219)
++.+++.++.+ +++++. .+.+.+.+..+.+. +|++.++. .-..+...+..+.+ .+.||+.
T Consensus 182 ~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia 261 (404)
T 1eep_A 182 IELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIA 261 (404)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEE
Confidence 44556666666 899994 89999999998888 99999932 11224555555554 5899999
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCCcE
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNPNV 90 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~~i 90 (219)
+-|.. +.+++..++. .|..-+
T Consensus 262 ~GGI~-~~~d~~~ala----~GAd~V 282 (404)
T 1eep_A 262 DGGIR-FSGDVVKAIA----AGADSV 282 (404)
T ss_dssp ESCCC-SHHHHHHHHH----HTCSEE
T ss_pred ECCCC-CHHHHHHHHH----cCCCHH
Confidence 99999 9999988765 375433
No 182
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=88.82 E-value=1.4 Score=40.52 Aligned_cols=90 Identities=21% Similarity=0.152 Sum_probs=60.1
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhhc--cccccCCCCC--CCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKVA--DIIQIPAFLC--RQTDLLVAAAKTG--KIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~v--d~~kI~S~~~--~n~~LL~~~a~~g--kPVilstG~~~t~~ei~~A 78 (219)
+..+.+.+++++|.++=+|+.+++.+-+.++. .-++|...+. +|..-++.+-+.+ --|++|-.+.+++.|...+
T Consensus 279 i~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~qiGGitea~~i 358 (436)
T 2al1_A 279 ADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKA 358 (436)
T ss_dssp HHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHH
Confidence 45677788899999999999999988877662 2356666665 4644444444433 3566666666677777777
Q ss_pred HHHHHHcCCCcEEEEee
Q 027740 79 AEKVRLAGNPNVMVCER 95 (219)
Q Consensus 79 ~e~i~~~Gn~~i~L~~c 95 (219)
++..++.|- .+++-||
T Consensus 359 a~lA~~~g~-~~~~sh~ 374 (436)
T 2al1_A 359 AQDSFAAGW-GVMVSHR 374 (436)
T ss_dssp HHHHHHTTC-EEEEECC
T ss_pred HHHHHHcCC-eEEEecC
Confidence 777666654 2444455
No 183
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=88.77 E-value=6.6 Score=36.32 Aligned_cols=166 Identities=16% Similarity=0.084 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i 82 (219)
+-+.|++.-++.+..++-.+||+-++..+++. .+.+.+.|+-+.... ..+..|.|=+ |.. +++|+...++.|
T Consensus 49 ~a~~lr~Ll~~~~~l~~~ga~D~~sA~~~~~aGf~Aiy~SG~~vAa~~---~~~~~G~PD~---~~~-~~~ev~~~v~rI 121 (433)
T 3eol_A 49 GANRLWKLIHEEDFVNALGALSGNQAMQMVRAGLKAIYLSGWQVAADA---NTASAMYPDQ---SLY-PANAGPELAKRI 121 (433)
T ss_dssp HHHHHHHHHHHSSCEEEEBCSSHHHHHHHHHTTCCCEEEC------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHhccCCCEEeCCCCcHHHHHHHHHhCCCEEEechHHHHhcc---chhcCCCCCC---ccC-CHHHHHHHHHHH
Confidence 44677788788888888899999999999988 899998887765420 0113355532 444 777777777665
Q ss_pred HHcC--CCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH
Q 027740 83 RLAG--NPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA 160 (219)
Q Consensus 83 ~~~G--n~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAva 160 (219)
...= ..++...+ +.. .+ .+| +.+||++|.|..- |...-+....+..+.
T Consensus 122 ~~a~~~~d~~~~~~-~~~--~~--~~d---------~~lPIiaD~DtGf----------------G~~~nv~rtVk~~~~ 171 (433)
T 3eol_A 122 NRTLQRADQIETAE-GKG--LS--VDT---------WFAPIVADAEAGF----------------GDPLDAFEIMKAYIE 171 (433)
T ss_dssp HHHHHHHHHHHHHT-TSC--CS--SSC---------SCCCEEEECC-------------------CCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhhhh-ccc--cc--ccC---------CCCCeEEECCCCC----------------CCcHHHHHHHHHHHH
Confidence 3210 00000000 000 11 112 4699999999764 322234455667799
Q ss_pred cCCcEEEEeeecC-CCCCC-CCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 027740 161 VGVDGVFMEVHDD-PLNAP-VDGPTQWPLRNLEELLEELVAIAKVSKG 206 (219)
Q Consensus 161 lGA~GlvIEkH~t-~d~a~-~D~~~sl~p~el~~lv~~ir~i~~~lg~ 206 (219)
+||.|+-||--.. |.|-= -+++.-.+.+|+-.=++..|.....+|.
T Consensus 172 AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~ 219 (433)
T 3eol_A 172 AGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGT 219 (433)
T ss_dssp HTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCC
Confidence 9999999997653 54432 1455556677766666666666555554
No 184
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=88.70 E-value=1.5 Score=40.48 Aligned_cols=90 Identities=16% Similarity=0.114 Sum_probs=65.3
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh--ccccccCCCCC--CCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV--ADIIQIPAFLC--RQTDLLVAAAKTG--KIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~--vd~~kI~S~~~--~n~~LL~~~a~~g--kPVilstG~~~t~~ei~~A 78 (219)
+..+.+.+++++|.++=+|+++++.+-+.++ -.-++|...+. +|..-++..-+.+ --|++|-...+++.|...+
T Consensus 276 ~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv~qiGGitea~~i 355 (439)
T 2akz_A 276 GALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQA 355 (439)
T ss_dssp HHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHH
Confidence 5567777889999999999999999888776 23466777774 5755555544443 4677788887788888888
Q ss_pred HHHHHHcCCCcEEEEee
Q 027740 79 AEKVRLAGNPNVMVCER 95 (219)
Q Consensus 79 ~e~i~~~Gn~~i~L~~c 95 (219)
++..++.|- .+++-||
T Consensus 356 a~lA~~~g~-~~~~sh~ 371 (439)
T 2akz_A 356 CKLAQENGW-GVMVSHR 371 (439)
T ss_dssp HHHHHHTTC-EEEEECC
T ss_pred HHHHHHCCC-eEEeecC
Confidence 888877764 3455565
No 185
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=88.61 E-value=4.1 Score=36.34 Aligned_cols=93 Identities=16% Similarity=0.194 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHhcCCCeEeee--CC-----cccHHH--------------H--hhh-ccccccCCC-CCC----------
Q 027740 3 EGLKILEKVKIAYDIPIVTDV--HE-----TVQCEE--------------V--GKV-ADIIQIPAF-LCR---------- 47 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~--~d-----~~~~~~--------------l--~~~-vd~~kI~S~-~~~---------- 47 (219)
+=|..+.+.|++.|+||+.++ ++ +.+.++ . .++ +|++|+.-- ++.
T Consensus 147 ~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~ 226 (332)
T 3iv3_A 147 AYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEV 226 (332)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCC
T ss_pred HHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccc
Confidence 347788899999999999977 33 222222 3 356 899999732 221
Q ss_pred ---CH----HHHHHHHhcCCeEE-EeCCCCCCHHHHHHHHHHHHHcCCC-cEEEEeecC
Q 027740 48 ---QT----DLLVAAAKTGKIIN-IKKGQFCASSVMVNSAEKVRLAGNP-NVMVCERGT 97 (219)
Q Consensus 48 ---n~----~LL~~~a~~gkPVi-lstG~~~t~~ei~~A~e~i~~~Gn~-~i~L~~cgs 97 (219)
.. .+-+.+..+..|++ ||-|. +-+++++.++.-.+.|.+ +=++|=|.+
T Consensus 227 ~y~~~ea~~~f~~~~~a~~~P~v~lsgG~--~~~~fl~~v~~A~~aGa~f~Gv~~GRnv 283 (332)
T 3iv3_A 227 VYSKEEAAQAFREQEASTDLPYIYLSAGV--SAELFQETLVFAHKAGAKFNGVLCGRAT 283 (332)
T ss_dssp CBCHHHHHHHHHHHHHTCSSCEEEECTTC--CHHHHHHHHHHHHHHTCCCCEEEECHHH
T ss_pred cccHHHHHHHHHHHHhcCCCCEEEECCCC--CHHHHHHHHHHHHHcCCCcceEEeeHHH
Confidence 11 25555567889966 68885 688999999887778853 466776654
No 186
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=88.51 E-value=0.6 Score=40.10 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh--ccccccCCCCCCC----HHHHHHHHhc---CCeEEEeCCCCCCHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV--ADIIQIPAFLCRQ----TDLLVAAAKT---GKIINIKKGQFCASS 73 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~--vd~~kI~S~~~~n----~~LL~~~a~~---gkPVilstG~~~t~~ 73 (219)
+-|+.|.++++++|+.++.++++.+.++...++ ++++-|-.+++.. ......+.+. +.+++-..|.. |.+
T Consensus 137 ~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIaEsGI~-t~e 215 (251)
T 1i4n_A 137 EQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIK-DPR 215 (251)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCC-CGG
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEEeCCCC-CHH
Confidence 458899999999999999999999999987776 7777776665542 2223333322 45666677776 777
Q ss_pred HHHHHHH
Q 027740 74 VMVNSAE 80 (219)
Q Consensus 74 ei~~A~e 80 (219)
++..+.+
T Consensus 216 dv~~~~~ 222 (251)
T 1i4n_A 216 ELKDLRG 222 (251)
T ss_dssp GHHHHTT
T ss_pred HHHHHHH
Confidence 7766544
No 187
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=88.31 E-value=1.8 Score=37.62 Aligned_cols=81 Identities=10% Similarity=-0.002 Sum_probs=62.4
Q ss_pred HHHHHHHHhc---CCCeE-eeeCCcccHHHHhhh-cccc-----ccCCC-CCCCHHHHHHHHhc-CCeEEEeCCCCCCHH
Q 027740 6 KILEKVKIAY---DIPIV-TDVHETVQCEEVGKV-ADII-----QIPAF-LCRQTDLLVAAAKT-GKIINIKKGQFCASS 73 (219)
Q Consensus 6 ~~L~~~~~~~---Gi~~~-tt~~d~~~~~~l~~~-vd~~-----kI~S~-~~~n~~LL~~~a~~-gkPVilstG~~~t~~ 73 (219)
..+.+.++++ |+.++ -+.-|+.....++++ ++++ .|||+ -+.|.++|+.+.+. +.|||..-|.+ |++
T Consensus 122 ~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~-TPs 200 (265)
T 1wv2_A 122 VETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVG-TAS 200 (265)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCC-SHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEeCCCC-CHH
Confidence 3445555555 99999 488889999999887 6654 25665 46789999999885 79999999999 999
Q ss_pred HHHHHHHHHHHcCCCcEE
Q 027740 74 VMVNSAEKVRLAGNPNVM 91 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~ 91 (219)
++..|.+ -|..-+.
T Consensus 201 DAa~Ame----LGAdgVl 214 (265)
T 1wv2_A 201 DAAIAME----LGCEAVL 214 (265)
T ss_dssp HHHHHHH----HTCSEEE
T ss_pred HHHHHHH----cCCCEEE
Confidence 9998876 3765443
No 188
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=88.29 E-value=3.3 Score=38.34 Aligned_cols=118 Identities=15% Similarity=0.094 Sum_probs=67.8
Q ss_pred cHHHHhhh-ccccccCCCC--CC-CHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-eecCC--
Q 027740 28 QCEEVGKV-ADIIQIPAFL--CR-QTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-ERGTM-- 98 (219)
Q Consensus 28 ~~~~l~~~-vd~~kI~S~~--~~-n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~-~cgs~-- 98 (219)
.++.+.+. +|++-|.+.. .. ..++++++.+. +.||+.++= . |.++...+ .+.|..-|.+. |.|+.
T Consensus 259 ~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v-~-t~~~a~~l----~~aGad~I~vg~~~G~~~~ 332 (514)
T 1jcn_A 259 RLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV-V-TAAQAKNL----IDAGVDGLRVGMGCGSICI 332 (514)
T ss_dssp HHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE-C-SHHHHHHH----HHHTCSEEEECSSCSCCBT
T ss_pred HHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc-c-hHHHHHHH----HHcCCCEEEECCCCCcccc
Confidence 33445555 7777773332 21 24778888776 899998532 3 67775544 45687655551 12211
Q ss_pred --C----CCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 99 --F----GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 99 --~----~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
. +.+ ...++..+..+++ +++||+.+. |.+. ..-...|.++||++++|=+-
T Consensus 333 t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~G--------------------GI~~--~~di~kala~GAd~V~iG~~ 389 (514)
T 1jcn_A 333 TQEVMACGRP-QGTAVYKVAEYARRFGVPIIADG--------------------GIQT--VGHVVKALALGASTVMMGSL 389 (514)
T ss_dssp TBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEES--------------------CCCS--HHHHHHHHHTTCSEEEESTT
T ss_pred cccccCCCcc-chhHHHHHHHHHhhCCCCEEEEC--------------------CCCC--HHHHHHHHHcCCCeeeECHH
Confidence 0 111 1123444555555 689998752 3221 23456788999999999876
Q ss_pred cCC
Q 027740 172 DDP 174 (219)
Q Consensus 172 ~t~ 174 (219)
|--
T Consensus 390 ~l~ 392 (514)
T 1jcn_A 390 LAA 392 (514)
T ss_dssp TTT
T ss_pred HHc
Confidence 543
No 189
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=88.27 E-value=3.2 Score=36.61 Aligned_cols=110 Identities=10% Similarity=0.045 Sum_probs=66.1
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcc----------------------------cHHHHhhh-cc--------------ccc
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETV----------------------------QCEEVGKV-AD--------------IIQ 40 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~----------------------------~~~~l~~~-vd--------------~~k 40 (219)
...|++.+++.||.+++ |=|..+ +++.+.+. +. +++
T Consensus 75 ~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ei~~Gi~~t~vkaGvIE 154 (330)
T 3pnz_A 75 VLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVK 154 (330)
T ss_dssp HHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHHHHHHHHHHHHTCSTTSSCCEEEEE
T ss_pred HHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccCchhhccCCHHHHHHHHHHHHHhhCCCcCcCcCeEE
Confidence 45688889999999887 655542 33444432 21 357
Q ss_pred cCCCC--CC--C----HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchh
Q 027740 41 IPAFL--CR--Q----TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRN 110 (219)
Q Consensus 41 I~S~~--~~--n----~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~ 110 (219)
||... .+ + ..-++.+.++|+||++-++.+-.-.| .++.+++.|.+ +++++||.-+ . |+..
T Consensus 155 iGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~---~l~iL~e~~~~~~~vvi~H~~~s---~----~~e~ 224 (330)
T 3pnz_A 155 FGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALE---QIEILKQENIPLEYLSIGHMDRN---L----DPYY 224 (330)
T ss_dssp EECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHH---HHHHHHHTTCCGGGEEETTGGGS---C----CHHH
T ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHH---HHHHHHHcCCCCCeEEEecCCCC---C----CHHH
Confidence 77643 22 1 13455666789999999985311222 26677777755 6889999521 1 2333
Q ss_pred HHHHHhcCCCEEEc
Q 027740 111 LEWMREANCPVVAD 124 (219)
Q Consensus 111 i~~lk~~~~pV~~d 124 (219)
...+-+.|+-|+++
T Consensus 225 a~~~l~~G~~i~~~ 238 (330)
T 3pnz_A 225 HKQVAKTGAFMSFD 238 (330)
T ss_dssp HHHHHTTTCEEEEC
T ss_pred HHHHHHcCcEEEEc
Confidence 33333357788885
No 190
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=88.21 E-value=1.6 Score=37.39 Aligned_cols=75 Identities=15% Similarity=0.029 Sum_probs=55.9
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhh-hccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 85 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~-~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~ 85 (219)
..+++++++|++-.. .+.+.+.+ -+|++-|+...-...++..++.+.||+|++.+.++.+.+|....++..++.
T Consensus 38 ~~~~~~~~~~~~~~~-----~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~ 112 (325)
T 2ho3_A 38 TAATFASRYQNIQLF-----DQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKN 112 (325)
T ss_dssp HHHHHGGGSSSCEEE-----SCHHHHHTSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEe-----CCHHHHhCCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHc
Confidence 345566777763211 13333333 389999999988899999999999999999999999999888877766655
Q ss_pred C
Q 027740 86 G 86 (219)
Q Consensus 86 G 86 (219)
|
T Consensus 113 g 113 (325)
T 2ho3_A 113 N 113 (325)
T ss_dssp T
T ss_pred C
Confidence 4
No 191
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=88.12 E-value=3.2 Score=45.26 Aligned_cols=119 Identities=13% Similarity=-0.044 Sum_probs=74.5
Q ss_pred HHHHhhh-ccc--cccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC-CC-CCCC
Q 027740 29 CEEVGKV-ADI--IQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT-MF-GYND 103 (219)
Q Consensus 29 ~~~l~~~-vd~--~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs-~~-~~~~ 103 (219)
++.+.+. +++ +-++.+.-..-++.+.+-+.|.+++...+ +..+...++..+...|..-+++++... .. +...
T Consensus 659 ~~~~~~~gv~i~gv~~~~G~p~~e~~~~~l~~~gi~~i~~v~---~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g 735 (2060)
T 2uva_G 659 LGRLRADGVPIEGLTIGAGVPSIEVANEYIQTLGIRHISFKP---GSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHS 735 (2060)
T ss_dssp HHHHHTTTCCEEEEEEESSCCCHHHHHHHHHHSCCSEEEECC---CSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCC
T ss_pred HHHHHHcCCCcceEeecCCCCCHHHHHHHHHHcCCeEEEecC---CHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCC
Confidence 3444455 777 77777765544577777788999985544 557777777778888877666555432 11 1111
Q ss_pred -CCc---cchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH-----------HcCCcEEE
Q 027740 104 -LIV---DPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI-----------AVGVDGVF 167 (219)
Q Consensus 104 -~~~---nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv-----------alGA~Glv 167 (219)
+++ -+..++.+++ .++||+.+.- ... ..-..+|. ++||+|++
T Consensus 736 ~~d~~~~~l~lv~~i~~~~~ipviaaGG----------------I~~------g~~i~aaltg~ws~~~g~palGAdgV~ 793 (2060)
T 2uva_G 736 FEDFHQPILLMYSRIRKCSNIVLVAGSG----------------FGG------SEDTYPYLTGSWSTKFGYPPMPFDGCM 793 (2060)
T ss_dssp SCCSHHHHHHHHHHHHTSTTEEEEEESS----------------CCS------HHHHHHHHHTCGGGTTTSCCCCCSCEE
T ss_pred cccccchHHHHHHHHHHHcCCCEEEeCC----------------CCC------HHHHHHHhcCcchhhcCCCCCCCCEEE
Confidence 111 2345666677 7899987421 111 33455788 89999998
Q ss_pred Eeeec
Q 027740 168 MEVHD 172 (219)
Q Consensus 168 IEkH~ 172 (219)
+=.-|
T Consensus 794 ~GT~f 798 (2060)
T 2uva_G 794 FGSRM 798 (2060)
T ss_dssp ESGGG
T ss_pred Echhh
Confidence 85543
No 192
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=88.08 E-value=1.5 Score=37.68 Aligned_cols=74 Identities=15% Similarity=0.046 Sum_probs=55.9
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
.++++++++|++... .+.+. +.+- +|++-|.+..-...++..++.+.||+|++.+.++.+++|....++..++
T Consensus 46 ~~~~~a~~~g~~~~~-----~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~ 120 (346)
T 3cea_A 46 QLEWAKNELGVETTY-----TNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKS 120 (346)
T ss_dssp HHHHHHHTTCCSEEE-----SCHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCccc-----CCHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 355667788874221 13343 4433 8999999988888999999999999999999998899998887776665
Q ss_pred c
Q 027740 85 A 85 (219)
Q Consensus 85 ~ 85 (219)
.
T Consensus 121 ~ 121 (346)
T 3cea_A 121 H 121 (346)
T ss_dssp C
T ss_pred C
Confidence 5
No 193
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=88.06 E-value=2.5 Score=37.34 Aligned_cols=100 Identities=12% Similarity=0.006 Sum_probs=68.9
Q ss_pred HHHHHHHhcCCeEEEeCCC-----CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEE
Q 027740 50 DLLVAAAKTGKIINIKKGQ-----FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVV 122 (219)
Q Consensus 50 ~LL~~~a~~gkPVilstG~-----~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~ 122 (219)
+.++++-+.|+.|.++--. -.+++.+...++.+.+.|...|.|+.-... ..|. ++ .+-+..+++ + ++|++
T Consensus 141 ~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~-~v-~~lv~~l~~~~p~~~i~ 217 (337)
T 3ble_A 141 FVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGV-LSPE-ET-FQGVDSLIQKYPDIHFE 217 (337)
T ss_dssp HHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCC-CCHH-HH-HHHHHHHHHHCTTSCEE
T ss_pred HHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCC-cCHH-HH-HHHHHHHHHhcCCCeEE
Confidence 4455666789988877433 225788888888899999988888886543 1232 12 244666777 6 89999
Q ss_pred EcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 123 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 123 ~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+ +.|-. .| +-..-+++|+..||+ .|+.-+.
T Consensus 218 ~-H~Hnd---------------~G---lA~AN~laAv~aGa~--~vd~tv~ 247 (337)
T 3ble_A 218 F-HGHND---------------YD---LSVANSLQAIRAGVK--GLHASIN 247 (337)
T ss_dssp E-ECBCT---------------TS---CHHHHHHHHHHTTCS--EEEEBGG
T ss_pred E-EecCC---------------cc---hHHHHHHHHHHhCCC--EEEEecc
Confidence 9 78863 23 225568899999999 8887554
No 194
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=88.05 E-value=1.9 Score=40.04 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=61.0
Q ss_pred HHHHHHHHHhc-CCCeEe-eeCCcccHHHHhhh-ccccccCCCC-------------CCCHHHHHHHHh----cCCeEEE
Q 027740 5 LKILEKVKIAY-DIPIVT-DVHETVQCEEVGKV-ADIIQIPAFL-------------CRQTDLLVAAAK----TGKIINI 64 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~-------------~~n~~LL~~~a~----~gkPVil 64 (219)
++.+++.++.+ +++++. .+.+.+.+..+.+. +|++++|.+. .-+..++..+++ .+.|||-
T Consensus 258 ~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa 337 (490)
T 4avf_A 258 IERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIA 337 (490)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEE
T ss_pred HHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEE
Confidence 46778888888 888766 58999999999998 9999985211 234555666554 4899999
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCCcE
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNPNV 90 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~~i 90 (219)
+-|.. +.+++..|+. .|..-+
T Consensus 338 ~GGI~-~~~di~kal~----~GAd~V 358 (490)
T 4avf_A 338 DGGIR-FSGDLAKAMV----AGAYCV 358 (490)
T ss_dssp ESCCC-SHHHHHHHHH----HTCSEE
T ss_pred eCCCC-CHHHHHHHHH----cCCCee
Confidence 99999 9999998864 376433
No 195
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=88.04 E-value=2.2 Score=36.41 Aligned_cols=76 Identities=17% Similarity=0.064 Sum_probs=56.7
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..++.++++|++- .+ .+.+.+ .+- +|++-|....-...++..++.+.||+|++.+.++.+.+|....++..++
T Consensus 37 ~~~~~~~~~g~~~---~~--~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~ 111 (332)
T 2glx_A 37 RGAAYATENGIGK---SV--TSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAARE 111 (332)
T ss_dssp HHHHHHHHTTCSC---CB--SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCc---cc--CCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH
Confidence 3456677788751 11 234444 433 8999999998888999999999999999999999899998887776655
Q ss_pred cCC
Q 027740 85 AGN 87 (219)
Q Consensus 85 ~Gn 87 (219)
.|.
T Consensus 112 ~g~ 114 (332)
T 2glx_A 112 AGV 114 (332)
T ss_dssp HTC
T ss_pred cCC
Confidence 543
No 196
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=88.02 E-value=1 Score=39.32 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=58.9
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
..+++++++|++-...++ .+.+. +.+- +|++-|+.-.-...++..++.+.||+|++.+.++.+.+|....++..++
T Consensus 43 ~~~~~a~~~~~~~~~~~~--~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~ 120 (362)
T 1ydw_A 43 KAKAFATANNYPESTKIH--GSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEA 120 (362)
T ss_dssp HHHHHHHHTTCCTTCEEE--SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCeee--CCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHH
Confidence 456677888863101111 23444 4443 8999999998889999999999999999999999999999888887766
Q ss_pred cCC
Q 027740 85 AGN 87 (219)
Q Consensus 85 ~Gn 87 (219)
.|.
T Consensus 121 ~g~ 123 (362)
T 1ydw_A 121 NGV 123 (362)
T ss_dssp TTC
T ss_pred cCC
Confidence 553
No 197
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=87.94 E-value=1 Score=41.77 Aligned_cols=79 Identities=14% Similarity=0.169 Sum_probs=60.6
Q ss_pred HHHHHHHHHhc-CCCeEe-eeCCcccHHHHhhh-ccccccCC--C--------------CCCCHHHHHHHHh-cCCeEEE
Q 027740 5 LKILEKVKIAY-DIPIVT-DVHETVQCEEVGKV-ADIIQIPA--F--------------LCRQTDLLVAAAK-TGKIINI 64 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S--~--------------~~~n~~LL~~~a~-~gkPVil 64 (219)
++.+++.++.+ +++++. ++.+.+.+..+.+. +|+++++. + ...+..++.++++ .+.||+.
T Consensus 284 ~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia 363 (514)
T 1jcn_A 284 IAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA 363 (514)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred HHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE
Confidence 45677777777 899997 89999999999988 99998843 1 1223566666665 4899999
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCC
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~ 88 (219)
+-|.. +..++..|+. .|..
T Consensus 364 ~GGI~-~~~di~kala----~GAd 382 (514)
T 1jcn_A 364 DGGIQ-TVGHVVKALA----LGAS 382 (514)
T ss_dssp ESCCC-SHHHHHHHHH----TTCS
T ss_pred ECCCC-CHHHHHHHHH----cCCC
Confidence 99999 9999988765 4754
No 198
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.91 E-value=2.3 Score=37.36 Aligned_cols=141 Identities=16% Similarity=0.135 Sum_probs=83.3
Q ss_pred HhcCCCeEeeeCCcccHHHHhhh---cccc-ccCCCCCC-CH-HHHHHHHhcCCeEEEe----CCCCCCHHHHHHHHH--
Q 027740 13 IAYDIPIVTDVHETVQCEEVGKV---ADII-QIPAFLCR-QT-DLLVAAAKTGKIINIK----KGQFCASSVMVNSAE-- 80 (219)
Q Consensus 13 ~~~Gi~~~tt~~d~~~~~~l~~~---vd~~-kI~S~~~~-n~-~LL~~~a~~gkPVils----tG~~~t~~ei~~A~e-- 80 (219)
+..++++.-+-++++-++...+. .+++ -|...+-. ++ .++..+++.|.||++- +|+.-|+++-...++
T Consensus 81 ~~~~vpisIDT~~~~V~eaaL~~~~Ga~iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~ 160 (300)
T 3k13_A 81 EIARVPVMIDSSKWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERA 160 (300)
T ss_dssp HHHTSCEEEECSCHHHHHHHHHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHH
T ss_pred hcCCCeEEEeCCCHHHHHHHHHhcCCCCEEEeCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHH
Confidence 34799999999999888876653 3332 12221111 11 6888999999999986 467667776444333
Q ss_pred --HH-HHcCCC-cEEEEeecCC-CCCCCCC---cc---chhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCC
Q 027740 81 --KV-RLAGNP-NVMVCERGTM-FGYNDLI---VD---PRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGL 147 (219)
Q Consensus 81 --~i-~~~Gn~-~i~L~~cgs~-~~~~~~~---~n---l~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~ 147 (219)
.+ .+.|-+ +=+++..+.. |+...+. -| |+++.++|+ + ++|+.+-.| +.+.|.
T Consensus 161 ~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~S---------------nkSfgl 225 (300)
T 3k13_A 161 YRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVS---------------NLSFSF 225 (300)
T ss_dssp HHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGG---------------GGGGGG
T ss_pred HHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEEC---------------cccccC
Confidence 32 567864 3356788874 5443221 13 355666674 6 888865211 222233
Q ss_pred ------cccHHHH-HHHHHHcCCcEEEE
Q 027740 148 ------RELIPCI-ARTAIAVGVDGVFM 168 (219)
Q Consensus 148 ------~~~~~~~-~~aAvalGA~GlvI 168 (219)
|.++..+ ...|+..|.|..++
T Consensus 226 p~~~~~R~~~n~~fl~~ai~~Gld~~Iv 253 (300)
T 3k13_A 226 RGNNYIREAMHAVFLYHAIQQGMDMGIV 253 (300)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCcchhHHHHHHHHHHHHHcCCCEEec
Confidence 4444443 34679999996554
No 199
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=87.59 E-value=0.83 Score=39.52 Aligned_cols=52 Identities=13% Similarity=-0.002 Sum_probs=47.7
Q ss_pred ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 36 ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 36 vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
+|++-|++-+-.+.++..++.+.||+|++.+.++.|++|.+..++..++.|.
T Consensus 73 vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 124 (312)
T 3o9z_A 73 VDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGR 124 (312)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCC
T ss_pred CcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999998887766653
No 200
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=87.55 E-value=10 Score=31.09 Aligned_cols=149 Identities=13% Similarity=0.160 Sum_probs=85.1
Q ss_pred HHHHHHHhcCCCeEeeeCCccc---------HHHHhhh-ccccccCCCC--CC---CHHHHHHHHhcCCeEEEeCCCCCC
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQ---------CEEVGKV-ADIIQIPAFL--CR---QTDLLVAAAKTGKIINIKKGQFCA 71 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~---------~~~l~~~-vd~~kI~S~~--~~---n~~LL~~~a~~gkPVilstG~~~t 71 (219)
.|...++..++++..-=.++.+ ++.+.+. +|++-|+..+ +. -..+++.+-+.|+-+++.-|..
T Consensus 44 ~l~~v~~~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~-- 121 (219)
T 2h6r_A 44 DLRMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNI-- 121 (219)
T ss_dssp THHHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSS--
T ss_pred HHHHHHHHcCCcEEEEECChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCc--
Confidence 4566666778999883344555 8889988 9999997753 21 1355666667899999998854
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEeecCCCCCC----CCCcc-c-hhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCcc
Q 027740 72 SSVMVNSAEKVRLAGNPNVMVCERGTMFGYN----DLIVD-P-RNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVA 143 (219)
Q Consensus 72 ~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~----~~~~n-l-~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~ 143 (219)
+|...+ ...|. .++-++....-++. ....+ + .....+|+ . ++||++.+.-+
T Consensus 122 -~e~~~~----~~~~~-~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~--------------- 180 (219)
T 2h6r_A 122 -NTSKAV----AALSP-DCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGIS--------------- 180 (219)
T ss_dssp -HHHHHH----TTTCC-SEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCC---------------
T ss_pred -hHHHHH----HhCCC-CEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcC---------------
Confidence 333332 22233 35545432210111 11112 2 33444555 3 78998843322
Q ss_pred CCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHH
Q 027740 144 SGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEEL 197 (219)
Q Consensus 144 ~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~i 197 (219)
. +.........||||+++ +.+++.++++.+.++++
T Consensus 181 --~-----~~~~~~~~~~gaDgvlV------------GsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 181 --K-----GEDVKAALDLGAEGVLL------------ASGVVKAKNVEEAIREL 215 (219)
T ss_dssp --S-----HHHHHHHHTTTCCCEEE------------SHHHHTCSSHHHHHHHH
T ss_pred --c-----HHHHHHHhhCCCCEEEE------------cHHHhCcccHHHHHHHH
Confidence 1 34455677889999988 44444455555555554
No 201
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=87.52 E-value=2.9 Score=36.52 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=69.1
Q ss_pred HHHHHHHhcCCeEE--EeC-------CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-C
Q 027740 50 DLLVAAAKTGKIIN--IKK-------GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-N 118 (219)
Q Consensus 50 ~LL~~~a~~gkPVi--lst-------G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~ 118 (219)
+.++++-+.|+.|- ++. |.. +++.+...++.+.+.|...|.|+..... .+|. ++ .+-+..+++ + +
T Consensus 126 ~~v~~ak~~G~~v~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~-~v-~~lv~~l~~~~~~ 201 (307)
T 1ydo_A 126 QVNNDAQKANLTTRAYLSTVFGCPYEKDV-PIEQVIRLSEALFEFGISELSLGDTIGA-ANPA-QV-ETVLEALLARFPA 201 (307)
T ss_dssp HHHHHHHHTTCEEEEEEECTTCBTTTBCC-CHHHHHHHHHHHHHHTCSCEEEECSSCC-CCHH-HH-HHHHHHHHTTSCG
T ss_pred HHHHHHHHCCCEEEEEEEEEecCCcCCCC-CHHHHHHHHHHHHhcCCCEEEEcCCCCC-cCHH-HH-HHHHHHHHHhCCC
Confidence 55677777899885 333 334 8999999999999999998988876442 2332 12 244666776 6 6
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+|+++ ..|-. .| +-..-+++|+..||+ .|+.-+.
T Consensus 202 ~~l~~-H~Hnd---------------~G---la~AN~laAv~aGa~--~vd~tv~ 235 (307)
T 1ydo_A 202 NQIAL-HFHDT---------------RG---TALANMVTALQMGIT--VFDGSAG 235 (307)
T ss_dssp GGEEE-ECBGG---------------GS---CHHHHHHHHHHHTCC--EEEEBGG
T ss_pred CeEEE-EECCC---------------Cc---hHHHHHHHHHHhCCC--EEEEccc
Confidence 89999 77763 13 225568899999998 8887554
No 202
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=87.51 E-value=0.86 Score=39.98 Aligned_cols=51 Identities=14% Similarity=0.062 Sum_probs=46.1
Q ss_pred ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 36 ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 36 vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
+|++-|.+-+-.+.++..++.+.||+|++.+.++.|++|....++..++.|
T Consensus 66 vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g 116 (362)
T 3fhl_A 66 IDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKG 116 (362)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999988888665554
No 203
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=87.45 E-value=13 Score=31.86 Aligned_cols=139 Identities=19% Similarity=0.147 Sum_probs=79.6
Q ss_pred HHHHHHHHHHh-cCCCeEe-eeCCc-------ccHHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCC-eEEEeCCCCCC
Q 027740 4 GLKILEKVKIA-YDIPIVT-DVHET-------VQCEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGK-IINIKKGQFCA 71 (219)
Q Consensus 4 gl~~L~~~~~~-~Gi~~~t-t~~d~-------~~~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gk-PVilstG~~~t 71 (219)
.+..+++.+++ ..+|++- +-+++ .-++.+.+. +|.+-|+---.. -.++++.+.+.|. +|.+-+..+ +
T Consensus 82 ~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t-~ 160 (267)
T 3vnd_A 82 CFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNA-D 160 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTC-C
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCC-C
Confidence 37888888877 6788765 23343 123334444 777777644443 4677888888886 465777766 6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEeecCCC---CCCC-CCc-cchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCC
Q 027740 72 SSVMVNSAEKVRLAGNPNVMVCERGTMF---GYND-LIV-DPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASG 145 (219)
Q Consensus 72 ~~ei~~A~e~i~~~Gn~~i~L~~cgs~~---~~~~-~~~-nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~ 145 (219)
.+.+...++ .+.. .+.+ +|.. +... ..- ....+..+|+ .++||.++-
T Consensus 161 ~eri~~i~~----~~~g-fvY~--vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGf-------------------- 213 (267)
T 3vnd_A 161 ADTLKMVSE----QGEG-YTYL--LSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGF-------------------- 213 (267)
T ss_dssp HHHHHHHHH----HCCS-CEEE--SCCCCCC--------CHHHHHHHHHTTTCCCEEECS--------------------
T ss_pred HHHHHHHHH----hCCC-cEEE--EecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEEC--------------------
Confidence 666655443 2222 3333 2221 2211 011 2355677777 789998831
Q ss_pred CCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 146 GLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 146 G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
|.+. +..+..++..||||+++=+-+
T Consensus 214 GI~~--~e~~~~~~~~gADgvVVGSai 238 (267)
T 3vnd_A 214 GIAE--PEQVRAAIKAGAAGAISGSAV 238 (267)
T ss_dssp SCCS--HHHHHHHHHTTCSEEEECHHH
T ss_pred CcCC--HHHHHHHHHcCCCEEEECHHH
Confidence 2211 344555899999999886543
No 204
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=87.31 E-value=0.72 Score=39.96 Aligned_cols=138 Identities=18% Similarity=0.154 Sum_probs=79.4
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--cccHHHHhhh-ccccccCCCCCCCHHHHHHH--HhcCCeEEEeCCCCCCHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TVQCEEVGKV-ADIIQIPAFLCRQTDLLVAA--AKTGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~--a~~gkPVilstG~~~t~~ei~~A~ 79 (219)
.+.+++.++..++|++.-.+. ...++.+.+. +|.+- ++..+...++.+.+ -+.|.|++++.. +++|...++
T Consensus 67 ~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V~-~~~~l~~~~~~~~i~~~~~g~~v~~~~~---~~~e~~~a~ 142 (305)
T 2nv1_A 67 PTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYID-ESEVLTPADEEFHLNKNEYTVPFVCGCR---DLGEATRRI 142 (305)
T ss_dssp HHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCSEEE-ECTTSCCSCSSCCCCGGGCSSCEEEEES---SHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEecccccchHHHHHHHHCCCCEEE-EeccCCHHHHHHHHHHhccCCcEEEEeC---CHHHHHHHH
Confidence 567788888889998876554 5556666666 77774 44443332222222 246888888653 778776653
Q ss_pred HHHHHcCCCcEEEEe--------------e-----------cCC-CC-CC---CCCccchhHHHHHh-cCCCEE--EcCC
Q 027740 80 EKVRLAGNPNVMVCE--------------R-----------GTM-FG-YN---DLIVDPRNLEWMRE-ANCPVV--ADVT 126 (219)
Q Consensus 80 e~i~~~Gn~~i~L~~--------------c-----------gs~-~~-~~---~~~~nl~~i~~lk~-~~~pV~--~ds~ 126 (219)
..|.. ++.++ + |.+ -. +. ....++..+..+++ .++||+ ...
T Consensus 143 ----~~Gad-~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~G- 216 (305)
T 2nv1_A 143 ----AEGAS-MLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAG- 216 (305)
T ss_dssp ----HTTCS-EEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCS-
T ss_pred ----HCCCC-EEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEecc-
Confidence 45654 44442 1 100 00 00 01245667777777 788987 432
Q ss_pred CCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 127 HSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 127 Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
|.+. ..-+..+..+||+|+++=+-+.
T Consensus 217 -------------------GI~~--~~d~~~~~~~GadgV~vGsai~ 242 (305)
T 2nv1_A 217 -------------------GVAT--PADAALMMQLGADGVFVGSGIF 242 (305)
T ss_dssp -------------------CCCS--HHHHHHHHHTTCSCEEECGGGG
T ss_pred -------------------CCCC--HHHHHHHHHcCCCEEEEcHHHH
Confidence 2211 2334456678999999877643
No 205
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=87.30 E-value=1 Score=40.81 Aligned_cols=74 Identities=9% Similarity=0.083 Sum_probs=58.1
Q ss_pred HHHHHHHhcCCC---eEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcC------CeEEEeCCCCCCHHHH
Q 027740 7 ILEKVKIAYDIP---IVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTG------KIINIKKGQFCASSVM 75 (219)
Q Consensus 7 ~L~~~~~~~Gi~---~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~g------kPVilstG~~~t~~ei 75 (219)
..+++++++|++ +.+ +.+. +++- +|++-|++.+-.+.++..++.+.| |+|++.+.++.+++|.
T Consensus 62 ~~~~~a~~~g~~~~~~~~------~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~ 135 (438)
T 3btv_A 62 TSIATIQRLKLSNATAFP------TLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQA 135 (438)
T ss_dssp HHHHHHHHTTCTTCEEES------SHHHHHHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHH
T ss_pred HHHHHHHHcCCCcceeeC------CHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHH
Confidence 456677888886 322 3444 4443 999999999888999999999999 9999999999999998
Q ss_pred HHHHHHHHHcC
Q 027740 76 VNSAEKVRLAG 86 (219)
Q Consensus 76 ~~A~e~i~~~G 86 (219)
...++..++.|
T Consensus 136 ~~l~~~a~~~g 146 (438)
T 3btv_A 136 ESIYKAAAERG 146 (438)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHcC
Confidence 88887655444
No 206
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=87.19 E-value=3.4 Score=37.61 Aligned_cols=85 Identities=20% Similarity=0.176 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhcc----ccccCCCC--CCCHHHHHHHHhcC--CeEEEeCCCCCCHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVAD----IIQIPAFL--CRQTDLLVAAAKTG--KIINIKKGQFCASSV 74 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd----~~kI~S~~--~~n~~LL~~~a~~g--kPVilstG~~~t~~e 74 (219)
+.++.+++.++++++.++=+|+.+++.+-+.++.. -+.|...+ ++|..-++.+-+.+ --|++|-...+++.|
T Consensus 271 ~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite 350 (431)
T 2fym_A 271 EFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTE 350 (431)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECGGGTCSHHH
T ss_pred HHHHHHHHHHHhCCceEEECCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEECccccCCHHH
Confidence 34566777777799999999999998887776522 24555555 34544444443322 345566666566666
Q ss_pred HHHHHHHHHHcCC
Q 027740 75 MVNSAEKVRLAGN 87 (219)
Q Consensus 75 i~~A~e~i~~~Gn 87 (219)
...++...++.|-
T Consensus 351 ~~~i~~~A~~~g~ 363 (431)
T 2fym_A 351 TLAAIKMAKDAGY 363 (431)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCC
Confidence 6666665555543
No 207
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=87.14 E-value=1.1 Score=38.94 Aligned_cols=59 Identities=22% Similarity=0.101 Sum_probs=49.5
Q ss_pred cHHHHh-hh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 28 QCEEVG-KV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 28 ~~~~l~-~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
+.+.+. +- +|++-|.+-.-.+.++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 58 ~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g 118 (352)
T 3kux_A 58 DPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAG 118 (352)
T ss_dssp CHHHHHHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTT
T ss_pred CHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcC
Confidence 444444 33 999999999999999999999999999999999999999988888666554
No 208
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=87.11 E-value=1.4 Score=38.66 Aligned_cols=57 Identities=9% Similarity=0.033 Sum_probs=49.3
Q ss_pred HHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 31 EVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 31 ~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
.+++- +|++-|..-+-...++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 60 ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~ 117 (358)
T 3gdo_A 60 ITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGV 117 (358)
T ss_dssp HHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred HhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 34444 9999999999999999999999999999999999999999988887766554
No 209
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=87.08 E-value=1.3 Score=38.49 Aligned_cols=52 Identities=13% Similarity=0.002 Sum_probs=48.2
Q ss_pred ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 36 ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 36 vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
+|++-|++-+-.+.++..++.+.||+|++.+.++.|++|.+..++..++.|.
T Consensus 74 vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 125 (318)
T 3oa2_A 74 LDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDK 125 (318)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTC
T ss_pred CcEEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999998888777654
No 210
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=87.05 E-value=1.8 Score=39.05 Aligned_cols=78 Identities=17% Similarity=0.144 Sum_probs=58.4
Q ss_pred HHHHHHHHhc-CCCeEe-eeCCcccHHHHhhh-ccccccCCCC-------------CCCHHHHHHHHhcCCeEEEeCCCC
Q 027740 6 KILEKVKIAY-DIPIVT-DVHETVQCEEVGKV-ADIIQIPAFL-------------CRQTDLLVAAAKTGKIINIKKGQF 69 (219)
Q Consensus 6 ~~L~~~~~~~-Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~-------------~~n~~LL~~~a~~gkPVilstG~~ 69 (219)
+.++..++.+ +++++. .+.+++++..+.+. +|+++++..- ..+.+.+.++++.-.|||..-|..
T Consensus 130 e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIAdGGI~ 209 (361)
T 3r2g_A 130 KTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVADGGIK 209 (361)
T ss_dssp HHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEEESCCC
T ss_pred HHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCCCEEEECCCC
Confidence 4555555555 899999 89999999999998 9999985331 124566666666545999999998
Q ss_pred CCHHHHHHHHHHHHHcCCC
Q 027740 70 CASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 70 ~t~~ei~~A~e~i~~~Gn~ 88 (219)
+..++..|+. .|..
T Consensus 210 -~~~di~kALa----~GAd 223 (361)
T 3r2g_A 210 -TSGDIVKALA----FGAD 223 (361)
T ss_dssp -SHHHHHHHHH----TTCS
T ss_pred -CHHHHHHHHH----cCCC
Confidence 9999988865 4654
No 211
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=86.94 E-value=1.5 Score=38.53 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=59.2
Q ss_pred HHHHHHHHHhc-CCCeEee-eCCcccHHHHhhh-ccccccCC---CCCC------------CHHHHHHHHhc-CCeEEEe
Q 027740 5 LKILEKVKIAY-DIPIVTD-VHETVQCEEVGKV-ADIIQIPA---FLCR------------QTDLLVAAAKT-GKIINIK 65 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~tt-~~d~~~~~~l~~~-vd~~kI~S---~~~~------------n~~LL~~~a~~-gkPVils 65 (219)
++.++++++.. +++++.- +.+++++..+.+. +|++.++. +.+. ...+|.++++. +.|||.+
T Consensus 137 ~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~ 216 (336)
T 1ypf_A 137 INMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIAD 216 (336)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEe
Confidence 45677777777 4666665 8888999999998 99999932 2111 35667777664 8999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCC
Q 027740 66 KGQFCASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 66 tG~~~t~~ei~~A~e~i~~~Gn~ 88 (219)
-|.. +..|+..|+. .|..
T Consensus 217 GGI~-~g~Dv~kala----lGAd 234 (336)
T 1ypf_A 217 GGIR-TNGDVAKSIR----FGAT 234 (336)
T ss_dssp SCCC-STHHHHHHHH----TTCS
T ss_pred CCCC-CHHHHHHHHH----cCCC
Confidence 9999 9999998865 4764
No 212
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=86.91 E-value=2.8 Score=38.54 Aligned_cols=116 Identities=20% Similarity=0.148 Sum_probs=65.1
Q ss_pred ccHHHHhhh-ccccccCCCCCC---CHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-eec---
Q 027740 27 VQCEEVGKV-ADIIQIPAFLCR---QTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-ERG--- 96 (219)
Q Consensus 27 ~~~~~l~~~-vd~~kI~S~~~~---n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~-~cg--- 96 (219)
+.++.+.+. +|.+.|....-. ..+.++++.+. ++||++.++. +.++...+ .+.|..-|.+- +.|
T Consensus 240 ~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~--t~e~a~~l----~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVA--TPEGTEAL----IKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEEC--SHHHHHHH----HHTTCSEEEECSSCSTTC
T ss_pred HHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcC--CHHHHHHH----HHcCCCEEEEcCCCCccc
Confidence 345555555 788887543222 45667777765 7999997653 68887544 45687545441 111
Q ss_pred -CC-C-CCCCCCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 97 -TM-F-GYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 97 -s~-~-~~~~~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+. . +.. .....+++.+++ .++||+.+. |.+. ..-...|.++||+++++=
T Consensus 314 ~~~~~~~~g--~p~~~~l~~v~~~~~~~~ipvia~G--------------------GI~~--~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 314 TTRVVAGVG--VPQLTAVMECSEVARKYDVPIIADG--------------------GIRY--SGDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHHCCC--CCHHHHHHHHHHHHHTTTCCEEEES--------------------CCCS--HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCC--ccHHHHHHHHHHHHhhcCCCEEEEC--------------------CcCC--HHHHHHHHHcCCCEEEEC
Confidence 11 0 111 112344444432 579998752 2221 344567889999998864
Q ss_pred eec
Q 027740 170 VHD 172 (219)
Q Consensus 170 kH~ 172 (219)
+-|
T Consensus 370 r~~ 372 (494)
T 1vrd_A 370 SIF 372 (494)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 213
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=86.86 E-value=2.9 Score=34.23 Aligned_cols=80 Identities=9% Similarity=0.105 Sum_probs=57.5
Q ss_pred HHHHHHHhc--CCCeEeeeCCcccHHHHhhh-cccc--ccCCCC-------CCCHHHHHHHHhcCCeEEEeCCCCCCHHH
Q 027740 7 ILEKVKIAY--DIPIVTDVHETVQCEEVGKV-ADII--QIPAFL-------CRQTDLLVAAAKTGKIINIKKGQFCASSV 74 (219)
Q Consensus 7 ~L~~~~~~~--Gi~~~tt~~d~~~~~~l~~~-vd~~--kI~S~~-------~~n~~LL~~~a~~gkPVilstG~~~t~~e 74 (219)
.+.+.+++. |+.++.++.+++++..+.+. +|++ .+.+.+ -.++.+++++.+.+.||+..=|.. |.++
T Consensus 122 ~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~~ipvia~GGI~-s~~~ 200 (234)
T 1yxy_A 122 SFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKAGIAVIAEGKIH-SPEE 200 (234)
T ss_dssp HHHHHHHHHCTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHTTCCEEEESCCC-SHHH
T ss_pred HHHHHHHHhCCCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhCCCCEEEECCCC-CHHH
Confidence 333444444 89999999998888877777 8988 555322 236788888877689999999988 8998
Q ss_pred HHHHHHHHHHcCCCcEE
Q 027740 75 MVNSAEKVRLAGNPNVM 91 (219)
Q Consensus 75 i~~A~e~i~~~Gn~~i~ 91 (219)
+....+ .|..-++
T Consensus 201 ~~~~~~----~Gad~v~ 213 (234)
T 1yxy_A 201 AKKIND----LGVAGIV 213 (234)
T ss_dssp HHHHHT----TCCSEEE
T ss_pred HHHHHH----CCCCEEE
Confidence 886543 5765443
No 214
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=86.80 E-value=2.1 Score=37.52 Aligned_cols=72 Identities=10% Similarity=-0.019 Sum_probs=57.9
Q ss_pred HHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCC-------CCCCCHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHH
Q 027740 8 LEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPA-------FLCRQTDLLVAAAK-TGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 8 L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S-------~~~~n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A 78 (219)
+.+..++.|++++..+.+.+.+..+.+. +|++.+-+ +...+..++.++.+ .+.||+..-|.. +.+++..+
T Consensus 116 ~~~~l~~~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~-~~~dv~~a 194 (326)
T 3bo9_A 116 YIRELKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIA-DGRGMAAA 194 (326)
T ss_dssp HHHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC-SHHHHHHH
T ss_pred HHHHHHHcCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCC-CHHHHHHH
Confidence 4455677899999999999888888887 99988822 24567888888765 589999999999 99999887
Q ss_pred HH
Q 027740 79 AE 80 (219)
Q Consensus 79 ~e 80 (219)
++
T Consensus 195 l~ 196 (326)
T 3bo9_A 195 FA 196 (326)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 215
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=86.80 E-value=5.2 Score=35.82 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=64.8
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcc----------------cHHHHhhh-cc--------------ccccCCC--CCCC--
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETV----------------QCEEVGKV-AD--------------IIQIPAF--LCRQ-- 48 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~----------------~~~~l~~~-vd--------------~~kI~S~--~~~n-- 48 (219)
...|++.+++.|+-+++ |-|..+ +++.+.++ +. ++|++.. .++.
T Consensus 112 ~~~l~~is~~tGv~IV~~TG~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E 191 (360)
T 3tn4_A 112 PAFLRRVAEETGLNIICATGYYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYE 191 (360)
T ss_dssp HHHHHHHHHHHCCEEEEEECCCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCcccCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHH
Confidence 46788999999999875 555433 23444332 11 3444332 2332
Q ss_pred HHH----HHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC--cEEEEe-ecCCCCCCCCCccchhHHHHHhcCCCE
Q 027740 49 TDL----LVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP--NVMVCE-RGTMFGYNDLIVDPRNLEWMREANCPV 121 (219)
Q Consensus 49 ~~L----L~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~--~i~L~~-cgs~~~~~~~~~nl~~i~~lk~~~~pV 121 (219)
... ++++.++|+||++-++.+ +. ....++.+++.|.+ .++++| |-+. |......+-+.++-+
T Consensus 192 ~k~frA~a~aa~etG~Pv~iHt~~~-~~--~~e~l~iL~eeG~~~~~vvi~H~~~~~--------d~~~~~~~l~~G~yl 260 (360)
T 3tn4_A 192 KMFFRAAARAQKETGAVIITHTQEG-TM--GPEQAAYLLEHGADPKKIVIGHMCDNT--------DPDYHRKTLAYGVYI 260 (360)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSTT-CC--HHHHHHHHHHTTCCGGGEEECCGGGCC--------CHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHhCCcEEEEcCcc-cC--CHHHHHHHHHcCCCCCceEEEcCCCCC--------CHHHHHHHHHcCCEE
Confidence 223 344456899999999877 42 22344667788864 799999 6331 333333333468888
Q ss_pred EEc
Q 027740 122 VAD 124 (219)
Q Consensus 122 ~~d 124 (219)
.||
T Consensus 261 ~fD 263 (360)
T 3tn4_A 261 AFD 263 (360)
T ss_dssp EEC
T ss_pred EEc
Confidence 886
No 216
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=86.75 E-value=3.9 Score=35.47 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=67.1
Q ss_pred HHHHHHHhcCCeEEEeCC---CCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cC----CCE
Q 027740 50 DLLVAAAKTGKIINIKKG---QFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN----CPV 121 (219)
Q Consensus 50 ~LL~~~a~~gkPVilstG---~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~----~pV 121 (219)
+.++++-+.|..|.++-. .. +++.+...++.+.+.|...|.|+..... ..|. ++ .+-+..+++ +. +|+
T Consensus 125 ~~v~~a~~~g~~v~~~~~d~~~~-~~~~~~~~~~~~~~~G~~~i~l~DT~G~-~~P~-~v-~~lv~~l~~~~~~~~~~~l 200 (293)
T 3ewb_X 125 HHISYARQKFDVVQFSPEDATRS-DRAFLIEAVQTAIDAGATVINIPDTVGY-TNPT-EF-GQLFQDLRREIKQFDDIIF 200 (293)
T ss_dssp HHHHHHHTTCSCEEEEEETGGGS-CHHHHHHHHHHHHHTTCCEEEEECSSSC-CCHH-HH-HHHHHHHHHHCTTGGGSEE
T ss_pred HHHHHHHhCCCEEEEEeccCCCC-CHHHHHHHHHHHHHcCCCEEEecCCCCC-CCHH-HH-HHHHHHHHHhcCCccCceE
Confidence 445556667888887643 34 8888999999999999988888886543 2332 12 134556666 53 679
Q ss_pred EEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 122 VADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 122 ~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
++ ..|-. .| +-..-+++|+.+||+ .|+.-..
T Consensus 201 ~~-H~Hnd---------------~G---la~AN~laA~~aGa~--~vd~sv~ 231 (293)
T 3ewb_X 201 AS-HCHDD---------------LG---MATANALAAIENGAR--RVEGTIN 231 (293)
T ss_dssp EE-ECBCT---------------TS---CHHHHHHHHHHTTCC--EEEEBGG
T ss_pred EE-EeCCC---------------cC---hHHHHHHHHHHhCCC--EEEeecc
Confidence 88 77863 13 225568899999998 7776543
No 217
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=86.62 E-value=2.3 Score=36.92 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=55.2
Q ss_pred HHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCC---------CCCCHHHHHHHHh-cCCeEEEeCCCCCCHHHHH
Q 027740 8 LEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAF---------LCRQTDLLVAAAK-TGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 8 L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~---------~~~n~~LL~~~a~-~gkPVilstG~~~t~~ei~ 76 (219)
+.+.+++.|++++..+.+++.+..+.+. +|++.+-+. ...+..++.++.+ .+.||++.-|.. +.+++.
T Consensus 110 ~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~-~~~~v~ 188 (328)
T 2gjl_A 110 HIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFA-DGRGLV 188 (328)
T ss_dssp HHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCC-SHHHHH
T ss_pred HHHHHHHcCCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCC-CHHHHH
Confidence 4455677899999988888888777776 888888221 2356788888775 589999999998 899888
Q ss_pred HHHH
Q 027740 77 NSAE 80 (219)
Q Consensus 77 ~A~e 80 (219)
.+++
T Consensus 189 ~al~ 192 (328)
T 2gjl_A 189 AALA 192 (328)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 218
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=86.62 E-value=1.1 Score=40.72 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=56.5
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
...++++++|++-. .+.-..+.+. +.+- +|++-|.+-+-.+.++..++.+.||+|++.+.++.+++|....++..++
T Consensus 121 ~~~~~a~~~g~~~~-~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~ 199 (433)
T 1h6d_A 121 KAKIVAAEYGVDPR-KIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKA 199 (433)
T ss_dssp HHHHHHHHTTCCGG-GEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcc-cccccCCHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHH
Confidence 45667788887520 0001122333 3433 8999999999999999999999999999999999999988777765444
Q ss_pred cC
Q 027740 85 AG 86 (219)
Q Consensus 85 ~G 86 (219)
.|
T Consensus 200 ~g 201 (433)
T 1h6d_A 200 AN 201 (433)
T ss_dssp HT
T ss_pred hC
Confidence 43
No 219
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=86.60 E-value=5.5 Score=35.82 Aligned_cols=126 Identities=13% Similarity=0.140 Sum_probs=68.5
Q ss_pred hcCCCeEeeeCCcccHHHHhhh---ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcE
Q 027740 14 AYDIPIVTDVHETVQCEEVGKV---ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNV 90 (219)
Q Consensus 14 ~~Gi~~~tt~~d~~~~~~l~~~---vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i 90 (219)
++.+|++..|++...=..++.. .-.+-+-+.++.--++.+++.+.+.++....|. .++....++.+.+.|.+ +
T Consensus 40 ~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i~~~~~~~~~~~g~---~~~~~e~~~~a~~aGvd-v 115 (361)
T 3r2g_A 40 TLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEFKKCKGPVFVSVGC---TENELQRAEALRDAGAD-F 115 (361)
T ss_dssp EESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHHHHHHTCCSCCBEEECS---SHHHHHHHHHHHHTTCC-E
T ss_pred EcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHhhcceEEEEEcCC---CHHHHHHHHHHHHcCCC-E
Confidence 3566777777765443333322 222222333444445555555555455444442 23444455666677765 6
Q ss_pred EEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEE-cCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEE
Q 027740 91 MVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVA-DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVF 167 (219)
Q Consensus 91 ~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~-ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~Glv 167 (219)
+.++... +++. --...|.++|+ + ++||+. +.. . ...++.++.+|||++.
T Consensus 116 I~id~a~--G~~~--~~~e~I~~ir~~~~~~~Vi~G~V~-------------------T-----~e~A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 116 FCVDVAH--AHAK--YVGKTLKSLRQLLGSRCIMAGNVA-------------------T-----YAGADYLASCGADIIK 167 (361)
T ss_dssp EEEECSC--CSSH--HHHHHHHHHHHHHTTCEEEEEEEC-------------------S-----HHHHHHHHHTTCSEEE
T ss_pred EEEeCCC--CCcH--hHHHHHHHHHHhcCCCeEEEcCcC-------------------C-----HHHHHHHHHcCCCEEE
Confidence 6665422 2221 11356777887 5 788876 211 1 5668899999999888
Q ss_pred Eeee
Q 027740 168 MEVH 171 (219)
Q Consensus 168 IEkH 171 (219)
+=.|
T Consensus 168 Vg~g 171 (361)
T 3r2g_A 168 AGIG 171 (361)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 7434
No 220
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=86.58 E-value=10 Score=32.71 Aligned_cols=136 Identities=18% Similarity=0.173 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhcCCCeEee--eCCcccHHHHhhh-cccc-ccCCCCCCC--HHHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTD--VHETVQCEEVGKV-ADII-QIPAFLCRQ--TDLLVAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt--~~d~~~~~~l~~~-vd~~-kI~S~~~~n--~~LL~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
.+..|.++++...+|++.- +.|+.|+.....+ .|++ -|.+..-.. ..|++.+-+.|+-+++... +.+|++.
T Consensus 92 s~~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh---~~~El~r 168 (258)
T 4a29_A 92 SYETLRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILIN---DENDLDI 168 (258)
T ss_dssp CHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEES---SHHHHHH
T ss_pred CHHHHHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcc---hHHHHHH
Confidence 3677888888999999983 5677788877766 7764 444443332 4778888889999999875 8999998
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHH
Q 027740 78 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCI 154 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~ 154 (219)
|++ .|. +++-.- +.+....++|+.....|.. . +..++.- | |... +.-
T Consensus 169 Al~----~~a-~iIGIN---NRnL~tf~vdl~~t~~L~~~ip~~~~~VsE-S-------------------GI~t--~~d 218 (258)
T 4a29_A 169 ALR----IGA-RFIGIM---SRDFETGEINKENQRKLISMIPSNVVKVAK-L-------------------GISE--RNE 218 (258)
T ss_dssp HHH----TTC-SEEEEC---SBCTTTCCBCHHHHHHHHTTSCTTSEEEEE-E-------------------SSCC--HHH
T ss_pred Hhc----CCC-cEEEEe---CCCccccccCHHHHHHHHhhCCCCCEEEEc-C-------------------CCCC--HHH
Confidence 875 344 444221 1234445688888777765 2 4444321 1 2111 333
Q ss_pred HHHHHHcCCcEEEEeeec
Q 027740 155 ARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 155 ~~aAvalGA~GlvIEkH~ 172 (219)
.......|++|++|=..+
T Consensus 219 v~~l~~~G~~a~LVGeal 236 (258)
T 4a29_A 219 IEELRKLGVNAFLISSSL 236 (258)
T ss_dssp HHHHHHTTCCEEEECHHH
T ss_pred HHHHHHCCCCEEEECHHH
Confidence 445678999999986664
No 221
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=86.48 E-value=15 Score=31.78 Aligned_cols=154 Identities=18% Similarity=0.146 Sum_probs=89.4
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCC------------CCC---HHHHHHHHhc--CCeEEEeC
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFL------------CRQ---TDLLVAAAKT--GKIINIKK 66 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~------------~~n---~~LL~~~a~~--gkPVilst 66 (219)
+..|++..++-...++-++||..+...+++. +|++-+|+.. ++- ....+++.+- ..||+.--
T Consensus 18 ~~~lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~ 97 (275)
T 3vav_A 18 VPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADL 97 (275)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred HHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEec
Confidence 3456777666677788899999999999999 9999888542 111 2334555553 35788765
Q ss_pred CC--CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccC
Q 027740 67 GQ--FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVAS 144 (219)
Q Consensus 67 G~--~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~ 144 (219)
.. ..++++....+..+...|.. -+=+|-+.. -...|..|.+.++||+. |.-..|-.-...++=+.
T Consensus 98 pfgsY~s~~~a~~~a~rl~kaGa~-aVklEdg~~--------~~~~i~~l~~~GIpv~g---HlgltPq~~~~~gg~~v- 164 (275)
T 3vav_A 98 PFGTYGTPADAFASAVKLMRAGAQ-MVKFEGGEW--------LAETVRFLVERAVPVCA---HVGLTPQSVHAFGGFKV- 164 (275)
T ss_dssp CTTSCSSHHHHHHHHHHHHHTTCS-EEEEECCGG--------GHHHHHHHHHTTCCEEE---EEESCGGGHHHHC---C-
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCC-EEEECCchh--------HHHHHHHHHHCCCCEEE---ecCCCceEEeccCCeEE-
Confidence 54 25888866555555455764 444665431 13456666667899864 31000000000000000
Q ss_pred CCCc----ccHHHHHHHHHHcCCcEEEEeee
Q 027740 145 GGLR----ELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 145 ~G~~----~~~~~~~~aAvalGA~GlvIEkH 171 (219)
-|+. +-+..-+++-..+||+++++|.=
T Consensus 165 qgrt~~~a~~~i~rA~a~~eAGA~~ivlE~v 195 (275)
T 3vav_A 165 QGKTEAGAAQLLRDARAVEEAGAQLIVLEAV 195 (275)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTCSEEEEESC
T ss_pred EcCCHHHHHHHHHHHHHHHHcCCCEEEecCC
Confidence 1221 12333455678899999999963
No 222
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=86.38 E-value=1.9 Score=39.51 Aligned_cols=92 Identities=14% Similarity=0.084 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhcc----ccccCCCCCC--CHHHHHHHHhc--CCeEEEeCCCCCCHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVAD----IIQIPAFLCR--QTDLLVAAAKT--GKIINIKKGQFCASSVM 75 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd----~~kI~S~~~~--n~~LL~~~a~~--gkPVilstG~~~t~~ei 75 (219)
.++.+++.+++++|.++=+|+++++.+-+.++.. -++|.+.+.. |..-++.+-+. ---|++|-...+++.|.
T Consensus 266 ai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea 345 (417)
T 3qn3_A 266 LIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQT 345 (417)
T ss_dssp HHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHH
T ss_pred HHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHH
Confidence 4566777788999999999999999988877632 2567776653 44444444222 24677888887788888
Q ss_pred HHHHHHHHHcCCCcEEEEeec
Q 027740 76 VNSAEKVRLAGNPNVMVCERG 96 (219)
Q Consensus 76 ~~A~e~i~~~Gn~~i~L~~cg 96 (219)
..+++..++.|- .+++-||.
T Consensus 346 ~kia~lA~~~G~-~v~vsh~s 365 (417)
T 3qn3_A 346 MRTVRLAQRNNY-KCVMSHRS 365 (417)
T ss_dssp HHHHHHHHHTTC-EEEEECCS
T ss_pred HHHHHHHHHcCC-eEEEeCCC
Confidence 888888877765 35566653
No 223
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=86.37 E-value=1.7 Score=34.37 Aligned_cols=160 Identities=15% Similarity=0.186 Sum_probs=78.8
Q ss_pred hHHHHHHHHHH---hcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhc-C-CeEEEeC----------
Q 027740 3 EGLKILEKVKI---AYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKT-G-KIINIKK---------- 66 (219)
Q Consensus 3 ~gl~~L~~~~~---~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~-g-kPVilst---------- 66 (219)
.|+..+++..+ ...+++++---+.+.+....+. ++-|-+......+..+++.+.+. + ..+++..
T Consensus 39 ~g~~~~~~l~~~~~~~~i~vi~~~~~~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~ 118 (237)
T 3cwo_X 39 NGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFM 118 (237)
T ss_dssp SHHHHHHHHHHHSSSCCEEEECCSSTHHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHTGGGEEEEEEEEESSSCEE
T ss_pred CHHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHhCCCceEEEeeecccCCcEE
Confidence 36666666543 3346666643333333333333 44444443223455566555442 2 2232211
Q ss_pred -----CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCC
Q 027740 67 -----GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGG 140 (219)
Q Consensus 67 -----G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~ 140 (219)
|...+..+....++.+...|...+++...+.. +... .++.+.|..++. .+.||+.-...+.
T Consensus 119 v~~~~g~~~~~~~~~~~i~~~~~~~~~~vli~~~~~~-g~~~-g~~~~~i~~~~~~~~~Pvia~~g~~~----------- 185 (237)
T 3cwo_X 119 VFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRD-GTKS-GYDTEMIRFVRPLTTLPIIASGGAGK----------- 185 (237)
T ss_dssp EEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTT-TCCS-CCCHHHHHHHGGGCCSCEEEESCCCS-----------
T ss_pred EEEeCCccccccCHHHHHHHHhhcCCCeEEEEecCCC-Cccc-cccHHHHHHHHHhcCCCEEecCCCCC-----------
Confidence 11111122334445566667766766543222 2222 245778888877 7899987323321
Q ss_pred CccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHH
Q 027740 141 GVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELL 194 (219)
Q Consensus 141 ~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv 194 (219)
+.-...+...||+|+++=+-+. ...+++.++++.+
T Consensus 186 -----------~~~~~~~~~~G~~~~~vg~a~~--------~~~~~~~~~~~~l 220 (237)
T 3cwo_X 186 -----------MEHFLEAFLAGADAALAASVFH--------FREIDVRELKEYL 220 (237)
T ss_dssp -----------HHHHHHHHHHTCSEEEESHHHH--------TTSSCHHHHHHHH
T ss_pred -----------HHHHHHHHHcCcHHHhhhHHHH--------cCCCCHHHHHHHH
Confidence 2333445568999988765321 2234566665543
No 224
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=86.33 E-value=1.1 Score=38.70 Aligned_cols=60 Identities=17% Similarity=0.277 Sum_probs=50.1
Q ss_pred cHHH-Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 28 QCEE-VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 28 ~~~~-l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
+.+. +++- +|++-|.+-+-.+.++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 57 ~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~ 118 (336)
T 2p2s_A 57 SAEQLITDASIDLIACAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGR 118 (336)
T ss_dssp CHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCC
T ss_pred CHHHHhhCCCCCEEEEeCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 3444 4433 8999999999999999999999999999999999999998888887776654
No 225
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=86.24 E-value=3.6 Score=36.97 Aligned_cols=141 Identities=17% Similarity=0.144 Sum_probs=86.0
Q ss_pred Hhhh-ccccccCCCCCC--CHHHHHHHHhcCC-eE--EEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC----CC
Q 027740 32 VGKV-ADIIQIPAFLCR--QTDLLVAAAKTGK-II--NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF----GY 101 (219)
Q Consensus 32 l~~~-vd~~kI~S~~~~--n~~LL~~~a~~gk-PV--ilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~----~~ 101 (219)
|.++ ++.+-+|++-.. ..+.++++++..+ +. .+.+ + ..++++.|++.++..|.+.+.+.-..|.. ..
T Consensus 43 L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~r--~-~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l 119 (370)
T 3rmj_A 43 LEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSR--A-IERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKL 119 (370)
T ss_dssp HHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSSSEEEEEEE--S-SHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTT
T ss_pred HHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCCCeEEEEec--C-CHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHh
Confidence 3444 556666654433 2455666665432 22 2333 2 78999999999988898888887776631 11
Q ss_pred C--C-CCccc--hhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCC
Q 027740 102 N--D-LIVDP--RNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLN 176 (219)
Q Consensus 102 ~--~-~~~nl--~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~ 176 (219)
. . +.++. ..+...|..+..|.|++-..- --..+++..++.++..+||+-+
T Consensus 120 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~---------------r~~~~~~~~~~~~~~~~Ga~~i---------- 174 (370)
T 3rmj_A 120 KMKPKQVIEAAVKAVKIAREYTDDVEFSCEDAL---------------RSEIDFLAEICGAVIEAGATTI---------- 174 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGG---------------GSCHHHHHHHHHHHHHHTCCEE----------
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCC---------------ccCHHHHHHHHHHHHHcCCCEE----------
Confidence 1 1 00110 123333445667777543220 0124567788889999999822
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHH
Q 027740 177 APVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 177 a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
+++|---.++|.++.++++.+++.
T Consensus 175 ~l~DT~G~~~P~~~~~lv~~l~~~ 198 (370)
T 3rmj_A 175 NIPDTVGYSIPYKTEEFFRELIAK 198 (370)
T ss_dssp EEECSSSCCCHHHHHHHHHHHHHH
T ss_pred EecCccCCcCHHHHHHHHHHHHHh
Confidence 257888899999999999888753
No 226
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=86.24 E-value=1.6 Score=37.25 Aligned_cols=79 Identities=20% Similarity=0.261 Sum_probs=55.2
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccC
Q 027740 60 KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLD 138 (219)
Q Consensus 60 kPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~ 138 (219)
.+|||.||. +|.+|+..|++.....|-. ++-..|-|.+. -.++..+..||+ .+.+|++
T Consensus 145 lKVIlEt~~-Lt~eei~~a~~ia~~aGAD---fVKTSTGf~~g--gAt~~dv~lmr~~vg~~v~V--------------- 203 (239)
T 3ngj_A 145 TKVIIECCY-LTNEEKVEVCKRCVAAGAE---YVKTSTGFGTH--GATPEDVKLMKDTVGDKALV--------------- 203 (239)
T ss_dssp EEEECCGGG-SCHHHHHHHHHHHHHHTCS---EEECCCSSSSC--CCCHHHHHHHHHHHGGGSEE---------------
T ss_pred eEEEEecCC-CCHHHHHHHHHHHHHHCcC---EEECCCCCCCC--CCCHHHHHHHHHhhCCCceE---------------
Confidence 689999998 4999999999999988875 34444434322 246778888888 5555554
Q ss_pred CCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 139 GGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 139 ~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
+.+||.|.. .-+++-+.+||+
T Consensus 204 ---KasGGIrt~--~da~~~i~aGA~ 224 (239)
T 3ngj_A 204 ---KAAGGIRTF--DDAMKMINNGAS 224 (239)
T ss_dssp ---EEESSCCSH--HHHHHHHHTTEE
T ss_pred ---EEeCCCCCH--HHHHHHHHhccc
Confidence 123566653 446677899997
No 227
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=86.20 E-value=1.4 Score=37.53 Aligned_cols=89 Identities=18% Similarity=0.154 Sum_probs=55.8
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHH-cCCCcEEEEeecCC--------CCCCCCCccchhHHHHHh-cCCCEEEcCCCC
Q 027740 59 GKIINIKKGQFCASSVMVNSAEKVRL-AGNPNVMVCERGTM--------FGYNDLIVDPRNLEWMRE-ANCPVVADVTHS 128 (219)
Q Consensus 59 gkPVilstG~~~t~~ei~~A~e~i~~-~Gn~~i~L~~cgs~--------~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs 128 (219)
+.|++++-+.. +++++..+++.+.+ .|.. .+-+|.++- |+.+ ...-...+..+++ .++||++=-+..
T Consensus 98 ~~p~~v~l~~~-~~~~~~~~a~~~~~~~g~d-~iei~~~~p~~~~g~~~~g~~-~~~~~eii~~v~~~~~~pv~vk~~~~ 174 (311)
T 1ep3_A 98 ELPIIANVAGS-EEADYVAVCAKIGDAANVK-AIELNISCPNVKHGGQAFGTD-PEVAAALVKACKAVSKVPLYVKLSPN 174 (311)
T ss_dssp TSCEEEEECCS-SHHHHHHHHHHHTTSTTEE-EEEEECCSEEGGGTTEEGGGC-HHHHHHHHHHHHHHCSSCEEEEECSC
T ss_pred CCcEEEEEcCC-CHHHHHHHHHHHhccCCCC-EEEEeCCCCCCCCchhhhcCC-HHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 89999999877 89999999999886 6654 444454321 1100 0111345566676 688987611111
Q ss_pred CCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 129 LQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 129 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
. .. ....+..+...|+|++.+-
T Consensus 175 ~---------------~~----~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 175 V---------------TD----IVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp S---------------SC----SHHHHHHHHHTTCSEEEEC
T ss_pred h---------------HH----HHHHHHHHHHcCCCEEEEe
Confidence 0 01 1456788899999988773
No 228
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=86.16 E-value=1.1 Score=39.35 Aligned_cols=60 Identities=13% Similarity=0.024 Sum_probs=50.2
Q ss_pred cHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 28 QCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 28 ~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
+.+.+ ++- +|++-|.+.+-...++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 58 ~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 119 (364)
T 3e82_A 58 SPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQR 119 (364)
T ss_dssp CHHHHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred CHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCC
Confidence 44444 333 8999999999999999999999999999999999999999988887666553
No 229
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=86.07 E-value=11 Score=33.14 Aligned_cols=99 Identities=12% Similarity=-0.009 Sum_probs=63.9
Q ss_pred HHHHHHHhc---CCeEEEeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCC---C-CCCccchhHHHHHh
Q 027740 50 DLLVAAAKT---GKIINIKKGQ------FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGY---N-DLIVDPRNLEWMRE 116 (219)
Q Consensus 50 ~LL~~~a~~---gkPVilstG~------~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~---~-~~~~nl~~i~~lk~ 116 (219)
+.++++-+. ++||.++-.. ..+++|....++.+.+.|..-|.+- .|..++. + ....++..+..+|+
T Consensus 207 eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs-~g~~~~~~~~~~~~~~~~~~~~~ir~ 285 (349)
T 3hgj_A 207 QVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCS-SGGVVLRVRIPLAPGFQVPFADAVRK 285 (349)
T ss_dssp HHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE-CCCSCSSSCCCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe-cCCcCcccccCCCccccHHHHHHHHH
Confidence 455555442 6899997654 3479999999999998887644443 3322211 1 12246677788888
Q ss_pred -cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeee
Q 027740 117 -ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVH 171 (219)
Q Consensus 117 -~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH 171 (219)
+++||+....-. . ...+..+++.| ||++++=+-
T Consensus 286 ~~~iPVi~~Ggi~-----------------t-----~e~a~~~l~~G~aD~V~iGR~ 320 (349)
T 3hgj_A 286 RVGLRTGAVGLIT-----------------T-----PEQAETLLQAGSADLVLLGRV 320 (349)
T ss_dssp HHCCEEEECSSCC-----------------C-----HHHHHHHHHTTSCSEEEESTH
T ss_pred HcCceEEEECCCC-----------------C-----HHHHHHHHHCCCceEEEecHH
Confidence 899998732211 1 45677888898 997776554
No 230
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=85.78 E-value=2.4 Score=38.83 Aligned_cols=82 Identities=16% Similarity=0.069 Sum_probs=50.5
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhhcc----ccccCCCCC--CCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKVAD----IIQIPAFLC--RQTDLLVAAAKTG--KIINIKKGQFCASSVMVN 77 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd----~~kI~S~~~--~n~~LL~~~a~~g--kPVilstG~~~t~~ei~~ 77 (219)
..+.+.+++++|.++=+|+.+++.+-+.++.. -++|...++ +|..-++.+-+.+ --|++|-...+++.|...
T Consensus 279 ~~~~~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ 358 (432)
T 2ptz_A 279 ETYCKWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIA 358 (432)
T ss_dssp HHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHH
T ss_pred HHHHHHHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 34457778999999999999999887776522 234544444 5555444443322 245556665556666666
Q ss_pred HHHHHHHcCC
Q 027740 78 SAEKVRLAGN 87 (219)
Q Consensus 78 A~e~i~~~Gn 87 (219)
+++..++.|-
T Consensus 359 i~~lA~~~g~ 368 (432)
T 2ptz_A 359 SSKLCMENGW 368 (432)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 6665555543
No 231
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=85.68 E-value=2.4 Score=38.98 Aligned_cols=92 Identities=14% Similarity=0.121 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccc----cccCCCC--CCCHHHHHHHHhcC--CeEEEeCCCCCCHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADI----IQIPAFL--CRQTDLLVAAAKTG--KIINIKKGQFCASSV 74 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~----~kI~S~~--~~n~~LL~~~a~~g--kPVilstG~~~t~~e 74 (219)
+.++.+++.+++++|.++=+|+++++.+-+.++... ++|...+ ++|..-++.+-+.+ --|++|-...+++.|
T Consensus 267 eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTe 346 (428)
T 3tqp_A 267 EMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTE 346 (428)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHH
T ss_pred HHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHH
Confidence 346677777889999999999999988877765221 3442333 33654444443322 356666666667777
Q ss_pred HHHHHHHHHHcCCCcEEEEee
Q 027740 75 MVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 75 i~~A~e~i~~~Gn~~i~L~~c 95 (219)
+..+++..++.|- .+++-||
T Consensus 347 alkia~lA~~~G~-~~~v~H~ 366 (428)
T 3tqp_A 347 TLATVGLAKSNKY-GVIISHR 366 (428)
T ss_dssp HHHHHHHHHHTTC-EEEEECC
T ss_pred HHHHHHHHHHcCC-eEEEeCC
Confidence 7776666666554 2444454
No 232
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=85.67 E-value=4.1 Score=35.05 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=67.4
Q ss_pred HHHHHHHhcCCeEEEeC---------CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-C
Q 027740 50 DLLVAAAKTGKIINIKK---------GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-N 118 (219)
Q Consensus 50 ~LL~~~a~~gkPVilst---------G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~ 118 (219)
+.++++-+.|++|.+.- |.. +++++...++.+.+.|...|.|+..... -.|. ++ .+-+..+++ + +
T Consensus 125 ~~i~~a~~~G~~v~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~-~~-~~lv~~l~~~~~~ 200 (298)
T 2cw6_A 125 AILKAAQSANISVRGYVSCALGCPYEGKI-SPAKVAEVTKKFYSMGCYEISLGDTIGV-GTPG-IM-KDMLSAVMQEVPL 200 (298)
T ss_dssp HHHHHHHHTTCEEEEEEETTTCBTTTBSC-CHHHHHHHHHHHHHTTCSEEEEEETTSC-CCHH-HH-HHHHHHHHHHSCG
T ss_pred HHHHHHHHCCCeEEEEEEEEeeCCcCCCC-CHHHHHHHHHHHHHcCCCEEEecCCCCC-cCHH-HH-HHHHHHHHHhCCC
Confidence 34666667899885322 234 8999999999999999998888875432 2232 12 244666776 6 6
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+|+++ +.|-. .| +-..-+++|+..||+ .|+.-..
T Consensus 201 ~~i~~-H~Hn~---------------~G---la~An~laA~~aGa~--~vd~tv~ 234 (298)
T 2cw6_A 201 AALAV-HCHDT---------------YG---QALANTLMALQMGVS--VVDSSVA 234 (298)
T ss_dssp GGEEE-EEBCT---------------TS---CHHHHHHHHHHTTCC--EEEEBTT
T ss_pred CeEEE-EECCC---------------Cc---hHHHHHHHHHHhCCC--EEEeecc
Confidence 89999 77753 23 224457899999998 8887433
No 233
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=85.48 E-value=0.98 Score=39.69 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=48.4
Q ss_pred cHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 28 QCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 28 ~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
+.+.+ ++- +|++-|..-.-...++..++.+.||+|++.+.++.+++|....++..++.|
T Consensus 59 ~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g 119 (359)
T 3m2t_A 59 NVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSD 119 (359)
T ss_dssp SHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHT
T ss_pred CHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcC
Confidence 44444 444 899999999888999999999999999999999999999888777655444
No 234
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=85.18 E-value=1.7 Score=40.67 Aligned_cols=116 Identities=17% Similarity=0.075 Sum_probs=67.3
Q ss_pred ccHHHHhhh-ccccccCCCCCCC---HHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-----ee
Q 027740 27 VQCEEVGKV-ADIIQIPAFLCRQ---TDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-----ER 95 (219)
Q Consensus 27 ~~~~~l~~~-vd~~kI~S~~~~n---~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~-----~c 95 (219)
+.++.+.+. +|++.|.+..-.. .++++++.+. +.||+.++- . |.++...++ ..|..-|.+- +|
T Consensus 259 era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v-~-t~e~a~~~~----~aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 259 TRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV-A-TAEATKALI----EAGANVVKVGIGPGSIC 332 (511)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE-C-SHHHHHHHH----HHTCSEEEECSSCSTTC
T ss_pred HHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeee-c-cHHHHHHHH----HhCCCEEEECCCCcccc
Confidence 344555566 8888887664433 3567777665 579998653 3 677765554 4577655431 33
Q ss_pred cCCC--CCCCCCccchhHHHHH---h-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 96 GTMF--GYNDLIVDPRNLEWMR---E-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 96 gs~~--~~~~~~~nl~~i~~lk---~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
++.. ++. ..++.++..++ + +++||+.|. |.+. ..-...|.++||+|+++=
T Consensus 333 ~~~~~~g~g--~p~~~~l~~v~~~~~~~~iPVIa~G--------------------GI~~--~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 333 TTRVVAGVG--VPQLTAVYDCATEARKHGIPVIADG--------------------GIKY--SGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CHHHHHCCC--CCHHHHHHHHHHHHHTTTCCEEEES--------------------CCCS--HHHHHHHHHTTCSEEEES
T ss_pred ccccccCCC--CCcHHHHHHHHHHHHhCCCcEEEeC--------------------CCCC--HHHHHHHHHhCchhheec
Confidence 3210 111 12445555442 2 579998852 2221 233446789999999997
Q ss_pred eec
Q 027740 170 VHD 172 (219)
Q Consensus 170 kH~ 172 (219)
+-|
T Consensus 389 s~~ 391 (511)
T 3usb_A 389 SMF 391 (511)
T ss_dssp TTT
T ss_pred HHH
Confidence 765
No 235
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=85.17 E-value=3.3 Score=37.92 Aligned_cols=81 Identities=17% Similarity=0.270 Sum_probs=59.3
Q ss_pred HHHHHHHHHhc-CCCeEe-eeCCcccHHHHhhh-ccccccCC-------------CCCCCHHHHHHHHh----cCCeEEE
Q 027740 5 LKILEKVKIAY-DIPIVT-DVHETVQCEEVGKV-ADIIQIPA-------------FLCRQTDLLVAAAK----TGKIINI 64 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S-------------~~~~n~~LL~~~a~----~gkPVil 64 (219)
+..+.++++.+ +++++. .+.+.+.+..+.+. +|.+++|. ....+...+.+++. .+.|||.
T Consensus 262 ~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia 341 (491)
T 1zfj_A 262 LRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIA 341 (491)
T ss_dssp HHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEe
Confidence 45667777777 788875 56667777777777 99998873 13445666666665 7899999
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCCcE
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNPNV 90 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~~i 90 (219)
+-|.. +..++..|.. .|-.-+
T Consensus 342 ~GGi~-~~~di~kal~----~GA~~v 362 (491)
T 1zfj_A 342 DGGIK-YSGDIVKALA----AGGNAV 362 (491)
T ss_dssp ESCCC-SHHHHHHHHH----TTCSEE
T ss_pred eCCCC-CHHHHHHHHH----cCCcce
Confidence 99999 9999998864 465433
No 236
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=84.98 E-value=8.8 Score=32.35 Aligned_cols=148 Identities=17% Similarity=0.207 Sum_probs=88.4
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCC-CCHHHH-----HHHHhcC------CeEE----EeCCC
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLC-RQTDLL-----VAAAKTG------KIIN----IKKGQ 68 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~-~n~~LL-----~~~a~~g------kPVi----lstG~ 68 (219)
++.+++.++ +++|++-.|.++.++ ...+|.+-++|=.- +|..++ +.+.+.| .+|- +=++.
T Consensus 49 ~~~v~~ik~-~~~Pvvlfp~~~~~v---~~gaD~~l~pslln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~ 124 (228)
T 3vzx_A 49 LRMMSKVRR-FLVPCVLEVSAIEAI---VPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPD 124 (228)
T ss_dssp HHHHHHHTT-SSSCEEEECSCGGGC---CSCCSEEEEEEETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSS
T ss_pred HHHHHHhhc-cCCCEEEeCCCHHHc---cccCCEEEEeeecCCCCcchhhhHHHHHHHHcCCCCcccceeeeEEEEECCC
Confidence 445555554 999999999998665 34588887776433 355555 6777777 3443 23333
Q ss_pred CCCH------------HHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCCC
Q 027740 69 FCAS------------SVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPAG 134 (219)
Q Consensus 69 ~~t~------------~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~ 134 (219)
+ +. +++..-+..-.-.|- +++-++- + +.+ .|...+..+++ + ++||.+-
T Consensus 125 s-~~~~~~~a~~~~~~e~~~~~a~~a~~~g~-~~VYld~-s--G~~---~~~~~i~~i~~~~~~~Pv~vG---------- 186 (228)
T 3vzx_A 125 C-KAAALTEADADLNMDDIVAYARVSELLQL-PIFYLEY-S--GVL---GDIEAVKKTKAVLETSTLFYG---------- 186 (228)
T ss_dssp S-HHHHHTTBCCCCCHHHHHHHHHHHHHTTC-SEEEEEC-T--TSC---CCHHHHHHHHHHCSSSEEEEE----------
T ss_pred C-cceeeecccCCCCHHHHHHHHHHHHHcCC-CEEEecC-C--CCc---CCHHHHHHHHHhcCCCCEEEe----------
Confidence 3 33 555433332222233 4666655 3 222 37888899988 7 7998771
Q ss_pred CccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHH
Q 027740 135 KKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELV 198 (219)
Q Consensus 135 ~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir 198 (219)
+|.+. +..++.+. .||||+++=+-+.- +|+.++++++.++
T Consensus 187 ----------GGI~t--~e~a~~~~-~gAD~VVVGSa~v~-----------~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 187 ----------GGIKD--AETAKQYA-EHADVIVVGNAVYE-----------DFDRALKTVAAVK 226 (228)
T ss_dssp ----------SSCCS--HHHHHHHH-TTCSEEEECTHHHH-----------CHHHHHHHHHHHH
T ss_pred ----------CCCCC--HHHHHHHH-hCCCEEEEChHHhc-----------CHHHHHHHHHHHh
Confidence 23332 33444444 69999998655321 4777888877664
No 237
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=84.97 E-value=3.1 Score=37.12 Aligned_cols=75 Identities=12% Similarity=0.019 Sum_probs=59.5
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcccHHHHhhh-ccccccCC---CC----CCCHHHHHHHHh-c--CCeEEEeCCCCCCH
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETVQCEEVGKV-ADIIQIPA---FL----CRQTDLLVAAAK-T--GKIINIKKGQFCAS 72 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S---~~----~~n~~LL~~~a~-~--gkPVilstG~~~t~ 72 (219)
++.++++++..+++++. .+.+++.+..+.+. +|++.|+. +. ..+...+.++.+ . +.||+.+-|.. +.
T Consensus 214 ~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~-~~ 292 (370)
T 1gox_A 214 WKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVR-RG 292 (370)
T ss_dssp HHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCC-SH
T ss_pred HHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCC-CH
Confidence 46788888999999998 78889999998888 99999955 21 124566666655 3 68999999999 99
Q ss_pred HHHHHHHH
Q 027740 73 SVMVNSAE 80 (219)
Q Consensus 73 ~ei~~A~e 80 (219)
+++..++.
T Consensus 293 ~D~~k~l~ 300 (370)
T 1gox_A 293 TDVFKALA 300 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888765
No 238
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=84.69 E-value=2.7 Score=38.92 Aligned_cols=91 Identities=20% Similarity=0.098 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccc----cccCCCCCC--CHHHHHHHHhcC--CeEEEeCCCCCCHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADI----IQIPAFLCR--QTDLLVAAAKTG--KIINIKKGQFCASSVM 75 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~----~kI~S~~~~--n~~LL~~~a~~g--kPVilstG~~~t~~ei 75 (219)
.++.+++.+++++|.++=+|+.+++.+-+.++... ++|...+.. |..-++.+-+.+ --|++|-...+++.|+
T Consensus 294 ai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea 373 (449)
T 3uj2_A 294 LVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSET 373 (449)
T ss_dssp HHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHH
T ss_pred HHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHH
Confidence 35666677889999999999999988877765222 344334432 443344333322 2455555555566666
Q ss_pred HHHHHHHHHcCCCcEEEEee
Q 027740 76 VNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 76 ~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+++..++.|- .+++-||
T Consensus 374 ~kia~lA~~~Gi-~~~v~H~ 392 (449)
T 3uj2_A 374 LEAIKMAHKAGY-TAVVSHR 392 (449)
T ss_dssp HHHHHHHHHTTC-EEEEECC
T ss_pred HHHHHHHHHcCC-eEEEeCC
Confidence 666665555543 2344444
No 239
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=84.67 E-value=1.5 Score=38.05 Aligned_cols=59 Identities=12% Similarity=0.072 Sum_probs=48.7
Q ss_pred cHHHH-hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 28 QCEEV-GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 28 ~~~~l-~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
+.+.+ ++- +|++-|..-+-...++..++.+.||+|++.+.++.+++|...-++..++.|
T Consensus 56 ~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g 116 (345)
T 3f4l_A 56 DLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKG 116 (345)
T ss_dssp CTHHHHTCTTEEEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHT
T ss_pred CHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 33444 433 899999999999999999999999999999999999999888777655544
No 240
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=84.62 E-value=3.6 Score=36.24 Aligned_cols=99 Identities=15% Similarity=0.096 Sum_probs=68.6
Q ss_pred HHHHHHHhcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cC----CCE
Q 027740 50 DLLVAAAKTGKIINIKK---GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN----CPV 121 (219)
Q Consensus 50 ~LL~~~a~~gkPVilst---G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~----~pV 121 (219)
+.++++-+.|+.|.+.. +.. +++.+...++.+.+.|...|.|+..... ..|. ++ .+-+..+++ +. +|+
T Consensus 126 ~~v~~a~~~g~~v~f~~~d~~~~-~~~~~~~~~~~~~~~G~~~i~l~DT~G~-~~P~-~v-~~lv~~l~~~~~~~~~~~i 201 (325)
T 3eeg_A 126 AAVKQAKKVVHEVEFFCEDAGRA-DQAFLARMVEAVIEAGADVVNIPDTTGY-MLPW-QY-GERIKYLMDNVSNIDKAIL 201 (325)
T ss_dssp HHHHHHHTTSSEEEEEEETGGGS-CHHHHHHHHHHHHHHTCSEEECCBSSSC-CCHH-HH-HHHHHHHHHHCSCGGGSEE
T ss_pred HHHHHHHHCCCEEEEEccccccc-hHHHHHHHHHHHHhcCCCEEEecCccCC-cCHH-HH-HHHHHHHHHhCCCCCceEE
Confidence 56677778899888863 344 7888888889898999987777765432 2332 12 244566776 64 889
Q ss_pred EEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 122 VADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 122 ~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
++ ..|-. .| +-..-+++|+.+||+ .|+.-+.
T Consensus 202 ~~-H~Hnd---------------~G---lA~AN~laA~~aGa~--~vd~tv~ 232 (325)
T 3eeg_A 202 SA-HCHND---------------LG---LATANSLAALQNGAR--QVECTIN 232 (325)
T ss_dssp EE-CBCCT---------------TS---CHHHHHHHHHHHTCC--EEEEBGG
T ss_pred EE-EeCCC---------------CC---HHHHHHHHHHHhCCC--EEEEecc
Confidence 98 77763 13 225568899999998 8887654
No 241
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=84.55 E-value=1.2 Score=38.82 Aligned_cols=60 Identities=13% Similarity=0.041 Sum_probs=51.4
Q ss_pred cHHH-Hhh-h-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 28 QCEE-VGK-V-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 28 ~~~~-l~~-~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
+.+. +++ - +|++-|++-.-...++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 71 ~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~ 133 (330)
T 4ew6_A 71 TIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQGA 133 (330)
T ss_dssp SHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred CHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCC
Confidence 4444 444 3 9999999999899999999999999999999999999999998888777664
No 242
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=84.55 E-value=3.6 Score=36.55 Aligned_cols=75 Identities=17% Similarity=0.120 Sum_probs=54.6
Q ss_pred HHHHHHHHHhc-CCCeE-eeeCCcccHHHHhhh-ccccccCCCC-------------CCCHHHHHH----HHhcCCeEEE
Q 027740 5 LKILEKVKIAY-DIPIV-TDVHETVQCEEVGKV-ADIIQIPAFL-------------CRQTDLLVA----AAKTGKIINI 64 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~-tt~~d~~~~~~l~~~-vd~~kI~S~~-------------~~n~~LL~~----~a~~gkPVil 64 (219)
++.++++++.+ +++++ -++.+++++..+.+. +|++.++..- .-....|.. +...+.|||.
T Consensus 149 ~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa 228 (351)
T 2c6q_A 149 VEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIIS 228 (351)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEE
Confidence 45677777777 89887 489999999999998 9999885321 111222322 3335899999
Q ss_pred eCCCCCCHHHHHHHHH
Q 027740 65 KKGQFCASSVMVNSAE 80 (219)
Q Consensus 65 stG~~~t~~ei~~A~e 80 (219)
+-|.. +..|+..|+.
T Consensus 229 ~GGI~-~g~di~kAla 243 (351)
T 2c6q_A 229 DGGCS-CPGDVAKAFG 243 (351)
T ss_dssp ESCCC-SHHHHHHHHH
T ss_pred eCCCC-CHHHHHHHHH
Confidence 99999 9999998754
No 243
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=84.37 E-value=4.1 Score=34.57 Aligned_cols=83 Identities=10% Similarity=-0.023 Sum_probs=58.4
Q ss_pred HHHHHHHHHhc---CCCeE-eeeCCcccHHHHhhh-cccccc-----CCC-CCCCHHHHHHHHh-cCCeEEEeCCCCCCH
Q 027740 5 LKILEKVKIAY---DIPIV-TDVHETVQCEEVGKV-ADIIQI-----PAF-LCRQTDLLVAAAK-TGKIINIKKGQFCAS 72 (219)
Q Consensus 5 l~~L~~~~~~~---Gi~~~-tt~~d~~~~~~l~~~-vd~~kI-----~S~-~~~n~~LL~~~a~-~gkPVilstG~~~t~ 72 (219)
+..+.+.++++ |+.++ -+..+++.+..+.+. ++++-. |++ ...+.++++.+.+ ++.||++--|.. +.
T Consensus 112 ~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~-t~ 190 (264)
T 1xm3_A 112 PVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIG-SP 190 (264)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCC-SH
T ss_pred hHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCC-CH
Confidence 45677888888 99888 566677777777777 777522 332 3446777877765 578999999998 99
Q ss_pred HHHHHHHHHHHHcCCCcEEE
Q 027740 73 SVMVNSAEKVRLAGNPNVMV 92 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~i~L 92 (219)
+++..+++ .|..-+++
T Consensus 191 eda~~~~~----~GAdgViV 206 (264)
T 1xm3_A 191 KDAAYAME----LGADGVLL 206 (264)
T ss_dssp HHHHHHHH----TTCSEEEE
T ss_pred HHHHHHHH----cCCCEEEE
Confidence 99776543 56654443
No 244
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=84.32 E-value=6.6 Score=31.78 Aligned_cols=88 Identities=11% Similarity=-0.018 Sum_probs=57.0
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc------cHHHHhhh-ccccccCCCCCCCHHHHH-HHHhcCCeEEEeCCC-----CC-
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV------QCEEVGKV-ADIIQIPAFLCRQTDLLV-AAAKTGKIINIKKGQ-----FC- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~------~~~~l~~~-vd~~kI~S~~~~n~~LL~-~~a~~gkPVilstG~-----~~- 70 (219)
+.-+.+.+++.|..++....+.. .++.+.+. +|.+-+.+ .+.+.++ .+.+.|.||++=... ..
T Consensus 27 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~---~~~~~~~~~l~~~~iPvV~~~~~~~~~~~V~ 103 (277)
T 3e61_A 27 ARGVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA---FNENIIENTLTDHHIPFVFIDRINNEHNGIS 103 (277)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG---GGHHHHHHHHHHC-CCEEEGGGCC-------
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec---CChHHHHHHHHcCCCCEEEEeccCCCCCeEE
Confidence 55678889999998876544332 12233333 77766665 3467788 888899999873221 11
Q ss_pred --CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 --ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 --t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 104 ~D~~~~g~~a~~~L~~~G~~~i~~i~~ 130 (277)
T 3e61_A 104 TNHFKGGQLQAEVVRKGKGKNVLIVHE 130 (277)
T ss_dssp --HHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred echHHHHHHHHHHHHHCCCCeEEEEeC
Confidence 2234566788899999999988864
No 245
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=84.32 E-value=0.92 Score=36.44 Aligned_cols=80 Identities=13% Similarity=-0.041 Sum_probs=56.1
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHh-c-CCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAK-T-GKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~-~-gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
.+.++|+++|++++..++++.++....++ +|++|+-........+++++.+ . +.||+..-|.. .+.+. ++ .
T Consensus 95 ~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~~~~~pvia~GGI~--~~~~~---~~-~ 168 (205)
T 1wa3_A 95 EISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVN--LDNVC---EW-F 168 (205)
T ss_dssp HHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEEEEBSSCC--TTTHH---HH-H
T ss_pred HHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHhCCCCcEEEcCCCC--HHHHH---HH-H
Confidence 46678899999999999988888888787 9999875543345677777766 3 68888888875 34333 22 3
Q ss_pred HcCCCcEEE
Q 027740 84 LAGNPNVMV 92 (219)
Q Consensus 84 ~~Gn~~i~L 92 (219)
..|..-+++
T Consensus 169 ~~Ga~~v~v 177 (205)
T 1wa3_A 169 KAGVLAVGV 177 (205)
T ss_dssp HHTCSCEEE
T ss_pred HCCCCEEEE
Confidence 456654444
No 246
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=84.26 E-value=7.1 Score=35.85 Aligned_cols=139 Identities=15% Similarity=0.150 Sum_probs=83.6
Q ss_pred HHhhh-ccccccCCCCCCC--HHHHHHHHhcCC-eEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC------C
Q 027740 31 EVGKV-ADIIQIPAFLCRQ--TDLLVAAAKTGK-IINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF------G 100 (219)
Q Consensus 31 ~l~~~-vd~~kI~S~~~~n--~~LL~~~a~~gk-PVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~------~ 100 (219)
.|.++ ++.+-+|+.-... .+..+.+++.++ +-++. ..-...++++.|++ .|.+.|.+.-.+|.+ +
T Consensus 69 ~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~~~~~~v~~-~~r~~~~di~~A~~----aG~~~V~i~~s~Sd~~~~~~l~ 143 (423)
T 3ivs_A 69 ALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILT-HIRCHMDDARVAVE----TGVDGVDVVIGTSQYLRKYSHG 143 (423)
T ss_dssp HHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEEE-EEESCHHHHHHHHH----TTCSEEEEEEEC----------
T ss_pred HHHHcCCCEEEEeecccCHHHHHHHHHHHhcCCCCEEEE-eeccChhhHHHHHH----cCCCEEEEEeeccHHHHHHHcC
Confidence 45555 7777777655543 346777777654 33332 22237888877765 588888888766642 1
Q ss_pred CCCC-Ccc--chhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCC
Q 027740 101 YNDL-IVD--PRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNA 177 (219)
Q Consensus 101 ~~~~-~~n--l~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a 177 (219)
.... .++ ...+...|+.++.|.+++.-+. ....+++..++.++..+||+- | +
T Consensus 144 ~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~---------------r~d~~~~~~v~~~~~~~Ga~~--i--------~ 198 (423)
T 3ivs_A 144 KDMTYIIDSATEVINFVKSKGIEVRFSSEDSF---------------RSDLVDLLSLYKAVDKIGVNR--V--------G 198 (423)
T ss_dssp ---CHHHHHHHHHHHHHHTTTCEEEEEEESGG---------------GSCHHHHHHHHHHHHHHCCSE--E--------E
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEccCc---------------CCCHHHHHHHHHHHHHhCCCc--c--------c
Confidence 1100 011 1234444556788887544321 123455667788899999982 1 2
Q ss_pred CCCCCCCCChHHHHHHHHHHHH
Q 027740 178 PVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 178 ~~D~~~sl~p~el~~lv~~ir~ 199 (219)
++|---.++|.++.++++.++.
T Consensus 199 l~DTvG~~~P~~v~~lv~~l~~ 220 (423)
T 3ivs_A 199 IADTVGCATPRQVYDLIRTLRG 220 (423)
T ss_dssp EEETTSCCCHHHHHHHHHHHHH
T ss_pred cCCccCcCCHHHHHHHHHHHHh
Confidence 5788889999999999998875
No 247
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=84.03 E-value=13 Score=32.62 Aligned_cols=99 Identities=17% Similarity=0.093 Sum_probs=65.2
Q ss_pred HHHHHHHh-cCCeEEEeCCCC------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCC---CCCCccchhHHHHHh-cC
Q 027740 50 DLLVAAAK-TGKIINIKKGQF------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGY---NDLIVDPRNLEWMRE-AN 118 (219)
Q Consensus 50 ~LL~~~a~-~gkPVilstG~~------~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~---~~~~~nl~~i~~lk~-~~ 118 (219)
+.++++-+ .+.||.++-... .+.+|....++.+.+.|..-|.+.. +...+. .....++..+..+|+ ++
T Consensus 199 eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~-g~~~~~~~~~~~~~~~~~~~~ik~~~~ 277 (340)
T 3gr7_A 199 EVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSS-GAIVPARMNVYPGYQVPFAELIRREAD 277 (340)
T ss_dssp HHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEEC-CCSSCCCCCCCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec-CCccCCCCCCCccccHHHHHHHHHHcC
Confidence 45555543 388999987653 3688999999999999976554433 322111 112246677788888 89
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeee
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVH 171 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH 171 (219)
+||+....-. . ...+..++..| ||+++|=+.
T Consensus 278 iPVi~~GgI~-----------------s-----~e~a~~~L~~G~aD~V~iGR~ 309 (340)
T 3gr7_A 278 IPTGAVGLIT-----------------S-----GWQAEEILQNGRADLVFLGRE 309 (340)
T ss_dssp CCEEEESSCC-----------------C-----HHHHHHHHHTTSCSEEEECHH
T ss_pred CcEEeeCCCC-----------------C-----HHHHHHHHHCCCeeEEEecHH
Confidence 9998742211 1 45677888898 998887665
No 248
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=83.86 E-value=2.8 Score=36.60 Aligned_cols=70 Identities=11% Similarity=-0.009 Sum_probs=54.6
Q ss_pred HHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCC-------CCCCCHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHH
Q 027740 10 KVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPA-------FLCRQTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 10 ~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S-------~~~~n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e 80 (219)
+..++.|++++..+.+.+.+..+.+. +|++.+-+ +...++.+++++.+ .+.||+..-|.. +.+++..+++
T Consensus 104 ~~l~~~g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~-~~~~~~~al~ 182 (332)
T 2z6i_A 104 ERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIA-DGEGAAAGFM 182 (332)
T ss_dssp HHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC-SHHHHHHHHH
T ss_pred HHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCC-CHHHHHHHHH
Confidence 34456799999998888888888877 99988832 13456788888765 589999999999 9998887765
No 249
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=83.73 E-value=16 Score=30.82 Aligned_cols=162 Identities=19% Similarity=0.189 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHhc-CCCeEee-eCCc-------ccHHHHhhh-ccccccCCCCCCC-HHHHHHHHhcCCe-EEEeCCCCC
Q 027740 3 EGLKILEKVKIAY-DIPIVTD-VHET-------VQCEEVGKV-ADIIQIPAFLCRQ-TDLLVAAAKTGKI-INIKKGQFC 70 (219)
Q Consensus 3 ~gl~~L~~~~~~~-Gi~~~tt-~~d~-------~~~~~l~~~-vd~~kI~S~~~~n-~~LL~~~a~~gkP-VilstG~~~ 70 (219)
..+.++++.+++. ++|++-- .+++ .-++.+.+. +|.+-++...... ..+.+.+-+.|.. |.+-+..+
T Consensus 80 ~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t- 158 (262)
T 2ekc_A 80 DVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTS- 158 (262)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTC-
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCC-
Confidence 3567788888877 8888773 3332 222334444 7766666443332 3455666667765 44445444
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCC-CCCCCC-C-cc-chhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCC
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTM-FGYNDL-I-VD-PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASG 145 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~-~~~~~~-~-~n-l~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~ 145 (219)
+.+.+...++. +. ..+.+-.... .+.... . -+ ...+..+|+ .++||.++.
T Consensus 159 ~~~rl~~ia~~----a~-gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~-------------------- 213 (262)
T 2ekc_A 159 TRKRIKLICEA----AD-EMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGF-------------------- 213 (262)
T ss_dssp CHHHHHHHHHH----CS-SCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEES--------------------
T ss_pred CHHHHHHHHHh----CC-CCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeC--------------------
Confidence 55555544432 22 2333322111 122211 1 11 256677787 789997731
Q ss_pred CCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 027740 146 GLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 146 G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~ 199 (219)
|.+. +..+ +++..||||+++=+.+.-.-. .+ +++.++++++.+++
T Consensus 214 GI~t--~e~~-~~~~~gADgvIVGSai~~~~~-~~-----~~~~~~~~~~~~~~ 258 (262)
T 2ekc_A 214 GVSK--KEHA-REIGSFADGVVVGSALVKLAG-QK-----KIEDLGNLVKELKE 258 (262)
T ss_dssp SCCS--HHHH-HHHHTTSSEEEECHHHHHHHH-TT-----CHHHHHHHHHHHHH
T ss_pred CCCC--HHHH-HHHHcCCCEEEECHHHHhhhh-hh-----hHHHHHHHHHHHHH
Confidence 2110 2333 338889999998765442100 01 57788888888764
No 250
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=83.37 E-value=3.3 Score=37.96 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV 35 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~ 35 (219)
+.++.+++.+++++|.++=+|+.+++.+-+.++
T Consensus 283 eai~~~~~l~~~~~i~~iEePl~~~d~~~~~~l 315 (444)
T 1w6t_A 283 EQIDYLEELVNKYPIITIEDGMDENDWDGWKAL 315 (444)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEECCCChhhHHHHHHH
Confidence 346677777778999999999999888877665
No 251
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=83.36 E-value=9.1 Score=30.64 Aligned_cols=91 Identities=10% Similarity=0.025 Sum_probs=61.6
Q ss_pred HHHHHHHHHhcCCCeEeeeCCccc------HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQ------CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~------~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.++++|..++....+... ++.+.+. +|.+-+.+.+-.+.+.++.+.+.|.||++-.....
T Consensus 21 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V 100 (272)
T 3o74_A 21 AKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRLDPAHFCSV 100 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCCCTTTCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccCCCccccCEE
Confidence 456788899999988775544321 2233333 77766666553456778888889999986433221
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
...-...+++++.+.|..+|.++..
T Consensus 101 ~~d~~~~~~~a~~~L~~~G~~~i~~i~~ 128 (272)
T 3o74_A 101 ISDDRDASRQLAASLLSSAPRSIALIGA 128 (272)
T ss_dssp EECHHHHHHHHHHHHHTTCCSEEEEEEE
T ss_pred EEchHHHHHHHHHHHHHCCCcEEEEEec
Confidence 2345677889999999999988864
No 252
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=83.30 E-value=4.9 Score=36.93 Aligned_cols=99 Identities=12% Similarity=0.084 Sum_probs=68.0
Q ss_pred HHHHHHhcCCeEEEeC--CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCC
Q 027740 51 LLVAAAKTGKIINIKK--GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTH 127 (219)
Q Consensus 51 LL~~~a~~gkPVilst--G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~H 127 (219)
.++++-+.|..|.++- +...+++.+...++.+.+.|...|.||..... ..|. ++ ..-+..+++ .++++.+ +.|
T Consensus 156 ~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~-~~P~-~v-~~lv~~l~~~~~~~i~~-H~H 231 (423)
T 3ivs_A 156 VINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGC-ATPR-QV-YDLIRTLRGVVSCDIEC-HFH 231 (423)
T ss_dssp HHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSC-CCHH-HH-HHHHHHHHHHCSSEEEE-EEB
T ss_pred HHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCccCc-CCHH-HH-HHHHHHHHhhcCCeEEE-EEC
Confidence 4666667899888753 33347888888888889999988888886543 2332 12 134556676 7889988 777
Q ss_pred CCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 128 SLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 128 s~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
-. .| +-..-+++|+.+||+ .|+.-+.
T Consensus 232 nd---------------~G---lAvAN~laAv~aGa~--~vd~ti~ 257 (423)
T 3ivs_A 232 ND---------------TG---MAIANAYCALEAGAT--HIDTSIL 257 (423)
T ss_dssp CT---------------TS---CHHHHHHHHHHTTCC--EEEEBGG
T ss_pred CC---------------Cc---hHHHHHHHHHHhCCC--EEEEecc
Confidence 52 13 225668899999998 8887643
No 253
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=83.20 E-value=9.2 Score=31.05 Aligned_cols=90 Identities=8% Similarity=-0.035 Sum_probs=59.8
Q ss_pred HHHHHHHHHhcCCCeEeeeCCccc------HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCC------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQ------CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCA------ 71 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~------~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t------ 71 (219)
+.-+.+.++++|..++....+... ++.+.+. +|.+-+.+.+..+ +.++.+.+.+.||++-......
T Consensus 32 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~~~ 110 (292)
T 3k4h_A 32 IRGISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND-RIIQYLHEQNFPFVLIGKPYDRKDEITY 110 (292)
T ss_dssp HHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC-HHHHHHHHTTCCEEEESCCSSCTTTSCE
T ss_pred HHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHHCCCCEEEECCCCCCCCCCCE
Confidence 456788899999888764443221 2223333 7766665555444 6788888999999875432211
Q ss_pred -----HHHHHHHHHHHHHcCCCcEEEEee
Q 027740 72 -----SSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 72 -----~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..-...|++++.+.|..+|.++..
T Consensus 111 V~~D~~~~g~~a~~~L~~~G~~~i~~i~~ 139 (292)
T 3k4h_A 111 VDNDNYTAAREVAEYLISLGHKQIAFIGG 139 (292)
T ss_dssp EECCHHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred EEECcHHHHHHHHHHHHHCCCceEEEEeC
Confidence 234677889999999999988864
No 254
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=83.06 E-value=11 Score=30.80 Aligned_cols=90 Identities=12% Similarity=-0.031 Sum_probs=57.5
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Ccc-------cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC----
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETV-------QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC---- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~-------~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~---- 70 (219)
+.-+.+.+++.|..++.... +++ .++.+.+. +|.+-+.+.+.. .+.++.+.+.+.||++=.....
T Consensus 27 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~~~~~~~ 105 (290)
T 2rgy_A 27 LKQTDLELRAVHRHVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHDLH-DEDLDELHRMHPKMVFLNRAFDALPD 105 (290)
T ss_dssp HHHHHHHHHHTTCEEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSSSC-HHHHHHHHHHCSSEEEESSCCTTSGG
T ss_pred HHHHHHHHHHCCCEEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCCCC-HHHHHHHhhcCCCEEEEccccCCCCC
Confidence 45677888999987765332 322 23333333 777666554443 5678888788999876432110
Q ss_pred ------CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ------ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ------t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 106 ~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 136 (290)
T 2rgy_A 106 ASFCPDHRRGGELAAATLIEHGHRKLAVISG 136 (290)
T ss_dssp GEECCCHHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CEEEeCcHHHHHHHHHHHHHCCCceEEEEeC
Confidence 1234566888999999999988753
No 255
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=83.05 E-value=5.5 Score=35.78 Aligned_cols=98 Identities=11% Similarity=-0.016 Sum_probs=67.0
Q ss_pred HHHHHHhcCCeEEEeC---CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cC----CCEE
Q 027740 51 LLVAAAKTGKIINIKK---GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN----CPVV 122 (219)
Q Consensus 51 LL~~~a~~gkPVilst---G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~----~pV~ 122 (219)
.++++-+.|..|.++- +.. +++.+...++.+.+.|...|.||..... ..|. ++ -.-+..+++ +. +|+.
T Consensus 133 ~v~~a~~~g~~v~~~~ed~~r~-~~~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~-~~-~~lv~~l~~~~~~~~~~~l~ 208 (370)
T 3rmj_A 133 AVKIAREYTDDVEFSCEDALRS-EIDFLAEICGAVIEAGATTINIPDTVGY-SIPY-KT-EEFFRELIAKTPNGGKVVWS 208 (370)
T ss_dssp HHHHHTTTCSCEEEEEETGGGS-CHHHHHHHHHHHHHHTCCEEEEECSSSC-CCHH-HH-HHHHHHHHHHSTTGGGSEEE
T ss_pred HHHHHHHcCCEEEEecCCCCcc-CHHHHHHHHHHHHHcCCCEEEecCccCC-cCHH-HH-HHHHHHHHHhCCCcCceEEE
Confidence 4455556678887765 444 8888889999999999998888886543 2332 12 244566776 53 7898
Q ss_pred EcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 123 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 123 ~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+ +.|-. .| +-..-+++|+.+||+ .|+.-..
T Consensus 209 ~-H~Hnd---------------~G---lAvAN~laAv~aGa~--~vd~tv~ 238 (370)
T 3rmj_A 209 A-HCHND---------------LG---LAVANSLAALKGGAR--QVECTVN 238 (370)
T ss_dssp E-ECBCT---------------TS---CHHHHHHHHHHTTCC--EEEEBGG
T ss_pred E-EeCCC---------------CC---hHHHHHHHHHHhCCC--EEEEecc
Confidence 8 77752 13 225568899999998 8877544
No 256
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=82.75 E-value=33 Score=32.43 Aligned_cols=101 Identities=16% Similarity=0.048 Sum_probs=60.8
Q ss_pred HHHHHHHh-c--CCeEEEeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeecCC-CCCC------CCCccchhHHH
Q 027740 50 DLLVAAAK-T--GKIINIKKGQ------FCASSVMVNSAEKVRLAGNPNVMVCERGTM-FGYN------DLIVDPRNLEW 113 (219)
Q Consensus 50 ~LL~~~a~-~--gkPVilstG~------~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~-~~~~------~~~~nl~~i~~ 113 (219)
+.++++-+ . ++||.++-.. +.++++....++.+...|-.-+.+ +.++. ...+ ....++..+..
T Consensus 196 eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (671)
T 1ps9_A 196 EVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINT-GIGWHEARIPTIATPVPRGAFSWVTRK 274 (671)
T ss_dssp HHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEE-EECBTTCSSCSSSTTSCTTTTHHHHHH
T ss_pred HHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEc-CCCccccccccccccCCcchHHHHHHH
Confidence 44444433 2 6899874331 237899999888898888765544 32221 1111 01123456667
Q ss_pred HHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeeecC
Q 027740 114 MRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHDD 173 (219)
Q Consensus 114 lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH~t 173 (219)
+|+ +++||+....-. . +..+..+++.| ||++.+=+-+-
T Consensus 275 i~~~~~iPvi~~Ggi~-----------------~-----~~~a~~~l~~g~aD~V~~gR~~l 314 (671)
T 1ps9_A 275 LKGHVSLPLVTTNRIN-----------------D-----PQVADDILSRGDADMVSMARPFL 314 (671)
T ss_dssp HTTSCSSCEEECSSCC-----------------S-----HHHHHHHHHTTSCSEEEESTHHH
T ss_pred HHHhcCceEEEeCCCC-----------------C-----HHHHHHHHHcCCCCEEEeCHHHH
Confidence 777 899998732211 1 45677788888 99888766543
No 257
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=82.32 E-value=4.5 Score=33.82 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=41.5
Q ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEE
Q 027740 58 TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVA 123 (219)
Q Consensus 58 ~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ 123 (219)
...|||+.|+.- +.+++..|++...+.|-. +.-..+-| ...-..+..+..|++ .+.+|++
T Consensus 119 ~~lkvIlet~~l-~~e~i~~a~~ia~eaGAD---fVKTsTGf--~~~gat~~dv~~m~~~vg~~v~V 179 (220)
T 1ub3_A 119 AVLKVILETGYF-SPEEIARLAEAAIRGGAD---FLKTSTGF--GPRGASLEDVALLVRVAQGRAQV 179 (220)
T ss_dssp SEEEEECCGGGS-CHHHHHHHHHHHHHHTCS---EEECCCSS--SSCCCCHHHHHHHHHHHTTSSEE
T ss_pred CCceEEEecCCC-CHHHHHHHHHHHHHhCCC---EEEeCCCC--CCCCCCHHHHHHHHHhhCCCCeE
Confidence 357999999987 999999999999998875 33332223 222245677788887 5554444
No 258
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=82.30 E-value=3.8 Score=38.11 Aligned_cols=88 Identities=16% Similarity=0.161 Sum_probs=62.3
Q ss_pred ccccccCCCCCC-CHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC-CcEEEEeecCCCCCCCCCccchhHHH
Q 027740 36 ADIIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN-PNVMVCERGTMFGYNDLIVDPRNLEW 113 (219)
Q Consensus 36 vd~~kI~S~~~~-n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn-~~i~L~~cgs~~~~~~~~~nl~~i~~ 113 (219)
..+++||-|.=+ .-..++.+....=||.+|-|.+++++|+..-++.+--... -.+.|.-| |+.+. +. ..+|.
T Consensus 276 aH~lWIGeRTRqlDgAHVef~rgI~NPIGvKvGP~~~p~elv~L~~~LnP~~epGRlTLI~R---mGa~k--v~-~~LP~ 349 (462)
T 3rzi_A 276 AHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELAVEYVERLDPHNKPGRLTLVSR---MGNHK--VR-DLLPP 349 (462)
T ss_dssp CSEEEECTTTCCTTSHHHHHHHHCCSCEEEEECTTCCHHHHHHHHHHHCTTCCTTSEEEEEC---CCTTT--HH-HHHHH
T ss_pred cccceeccccCCCCccHHHHHhcCCCCeeEeECCCCCHHHHHHHHHHhCCCCCCCeEEEEEc---cCCch--hh-hhHHH
Confidence 348899988766 5566777778888999999999999999999998832211 26888887 44442 22 23333
Q ss_pred ----HHhcCCCEEE--cCCCCC
Q 027740 114 ----MREANCPVVA--DVTHSL 129 (219)
Q Consensus 114 ----lk~~~~pV~~--ds~Hs~ 129 (219)
.++.+.+|+. ||=|.|
T Consensus 350 li~aV~~~G~~VvW~cDPMHGN 371 (462)
T 3rzi_A 350 IVEKVQATGHQVIWQCDPMHGN 371 (462)
T ss_dssp HHHHHHHTSCCCEEEECCSTTS
T ss_pred HHHHHHHCCCCeEEEeCCCCCC
Confidence 3447778776 666875
No 259
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=82.29 E-value=4.7 Score=36.99 Aligned_cols=76 Identities=22% Similarity=0.244 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhc-CCCeE-eeeCCcccHHHHhhh-ccccccCCCC-------------CCCHHHHHHHHh----cCCeEE
Q 027740 4 GLKILEKVKIAY-DIPIV-TDVHETVQCEEVGKV-ADIIQIPAFL-------------CRQTDLLVAAAK----TGKIIN 63 (219)
Q Consensus 4 gl~~L~~~~~~~-Gi~~~-tt~~d~~~~~~l~~~-vd~~kI~S~~-------------~~n~~LL~~~a~----~gkPVi 63 (219)
-++.+++.++.+ +++++ -.+.+.+.+..+.+. +|++.++..- .-+...+..+++ .+.||+
T Consensus 265 ~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvi 344 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPII 344 (494)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEE
Confidence 356677777777 78875 478888889888888 9999985421 223444444443 489999
Q ss_pred EeCCCCCCHHHHHHHHH
Q 027740 64 IKKGQFCASSVMVNSAE 80 (219)
Q Consensus 64 lstG~~~t~~ei~~A~e 80 (219)
.+-|.. +..++..|+.
T Consensus 345 a~GGI~-~~~di~kala 360 (494)
T 1vrd_A 345 ADGGIR-YSGDIVKALA 360 (494)
T ss_dssp EESCCC-SHHHHHHHHH
T ss_pred EECCcC-CHHHHHHHHH
Confidence 999999 9999998764
No 260
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=82.09 E-value=6 Score=36.54 Aligned_cols=107 Identities=9% Similarity=0.073 Sum_probs=69.3
Q ss_pred CCCCCHHHHHHHHhcCC-eEEEeC-----CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-
Q 027740 44 FLCRQTDLLVAAAKTGK-IINIKK-----GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE- 116 (219)
Q Consensus 44 ~~~~n~~LL~~~a~~gk-PVilst-----G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~- 116 (219)
++ .+....+++--.|. |+.+.. ...++++.++.+++... .++. .+++-..+.|+ +...-|++.|..+.+
T Consensus 151 r~-aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~-~~~~-~~Vv~t~t~~g-~g~~ddl~~Ia~ia~~ 226 (450)
T 3bc8_A 151 RI-DQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELG-PEHI-LCLHSTTACFA-PRVPDRLEELAVICAN 226 (450)
T ss_dssp CC-CCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHC-GGGE-EEEEEESSCCT-TBCCCCHHHHHHHHHH
T ss_pred CC-cHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcC-CCCE-EEEEEECCcCC-CceecCHHHHHHHHHH
Confidence 55 78888888877774 666654 23458999998876542 1232 22222222233 222358999998877
Q ss_pred cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc-CCcEEEEeee
Q 027740 117 ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV-GVDGVFMEVH 171 (219)
Q Consensus 117 ~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAval-GA~GlvIEkH 171 (219)
+++|+.+|.-|.. ...+.......+... |||.++.-.|
T Consensus 227 ~gi~l~VD~A~G~-----------------~~~~~~~l~~~a~~~~~AD~~v~S~H 265 (450)
T 3bc8_A 227 YDIPHVVNNAYGL-----------------QSSKCMHLIQQGARVGRIDAFVQSLD 265 (450)
T ss_dssp HTCCEEEECTTTT-----------------TCHHHHHHHHHHHHHSCCCEEEEEHH
T ss_pred CCCeEEEECCCch-----------------hhhhhHhHHHHHhcccCCCEEEECCc
Confidence 9999999988863 223345556677777 8998776666
No 261
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=81.98 E-value=9.8 Score=31.38 Aligned_cols=86 Identities=19% Similarity=0.186 Sum_probs=55.0
Q ss_pred HHHHHHhcCCeEEEeC----CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEE
Q 027740 51 LLVAAAKTGKIINIKK----GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVA 123 (219)
Q Consensus 51 LL~~~a~~gkPVilst----G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ 123 (219)
.++++.+.-.|+++|- +.. +.+++..+++.+.+.|-.-| .+++ ++..--.++..+..+++ . .+||..
T Consensus 107 ~i~~v~~a~~pv~vKvi~e~~~l-~~~~~~~~a~~a~eaGad~I----~tst-g~~~gga~~~~i~~v~~~v~~~ipVia 180 (225)
T 1mzh_A 107 ELKEIFRETPSAVHKVIVETPYL-NEEEIKKAVEICIEAGADFI----KTST-GFAPRGTTLEEVRLIKSSAKGRIKVKA 180 (225)
T ss_dssp HHHHHHHTCTTSEEEEECCGGGC-CHHHHHHHHHHHHHHTCSEE----ECCC-SCSSSCCCHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHhcCceEEEEEeCCCC-CHHHHHHHHHHHHHhCCCEE----EECC-CCCCCCCCHHHHHHHHHHhCCCCcEEE
Confidence 3555544333877765 544 89999999999999997644 3222 12111246788888887 4 689887
Q ss_pred cCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 124 DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 124 ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
. ||.+. ..-+...+.+||+
T Consensus 181 ~--------------------GGI~t--~~da~~~l~aGA~ 199 (225)
T 1mzh_A 181 S--------------------GGIRD--LETAISMIEAGAD 199 (225)
T ss_dssp E--------------------SSCCS--HHHHHHHHHTTCS
T ss_pred E--------------------CCCCC--HHHHHHHHHhCch
Confidence 3 24333 3446667789998
No 262
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=81.98 E-value=3.7 Score=36.56 Aligned_cols=87 Identities=9% Similarity=-0.050 Sum_probs=55.5
Q ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC---CCccc----hhHHHHHh-cCCCEEEcCCCCC
Q 027740 58 TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND---LIVDP----RNLEWMRE-ANCPVVADVTHSL 129 (219)
Q Consensus 58 ~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~---~~~nl----~~i~~lk~-~~~pV~~ds~Hs~ 129 (219)
.++||+++-+-. +++||..+++.+...|..+.+-+.+++- +.+. ..-|. ..+..+|+ .+.||.+= .+
T Consensus 127 ~~~pvivsI~g~-~~~d~~~~a~~l~~~g~~d~ielNisCP-n~~G~~~l~~~~e~l~~il~av~~~~~~PV~vK--i~- 201 (345)
T 3oix_A 127 DSKNHFLSLVGM-SPEETHTILXMVEASKYQGLVELNLSCP-NVPGXPQIAYDFETTDQILSEVFTYFTKPLGIK--LP- 201 (345)
T ss_dssp TCCCCEEEECCS-SHHHHHHHHHHHHHSSCCSEEEEECSCC-CSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEE--EC-
T ss_pred CCCCEEEEecCC-CHHHHHHHHHHHhccCCCcEEEEecCCC-CcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEE--EC-
Confidence 578999998877 9999999999998878776777777652 1111 10122 22334455 67898761 11
Q ss_pred CCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEE
Q 027740 130 QQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGV 166 (219)
Q Consensus 130 ~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~Gl 166 (219)
| +. -...++.++..+|++|+
T Consensus 202 --p-------------~~--~~~~~a~~~~~aga~~i 221 (345)
T 3oix_A 202 --P-------------YF--DIVHFDQAAAIFNXYPL 221 (345)
T ss_dssp --C-------------CC--CHHHHHHHHHHHTTSCC
T ss_pred --C-------------CC--CHHHHHHHHHHhCCCce
Confidence 0 10 02566777888888765
No 263
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=81.80 E-value=1.4 Score=40.38 Aligned_cols=65 Identities=12% Similarity=0.205 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHhcCCCeEe---------------eeCCcccHHHHhhh-ccccccCCCCCCCH--------HHHHHHHhc
Q 027740 3 EGLKILEKVKIAYDIPIVT---------------DVHETVQCEEVGKV-ADIIQIPAFLCRQT--------DLLVAAAKT 58 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~t---------------t~~d~~~~~~l~~~-vd~~kI~S~~~~n~--------~LL~~~a~~ 58 (219)
.|++.|.++.++.|+.|.- --+...+++..++- ||++|+-....... .+-+++.++
T Consensus 84 ~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~~~pGs~~~~~~da~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~AL~~t 163 (404)
T 3hg3_A 84 HGIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLALNRT 163 (404)
T ss_dssp THHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCeeEEEecCCccccCCCCccHHHHHHHHHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHHHHhc
Confidence 4899999999999999863 12333455566777 99999976544433 356788889
Q ss_pred CCeEEEeCC
Q 027740 59 GKIINIKKG 67 (219)
Q Consensus 59 gkPVilstG 67 (219)
|+||++|..
T Consensus 164 GRpi~~sc~ 172 (404)
T 3hg3_A 164 GRSIVYSCE 172 (404)
T ss_dssp TCCCEEEEC
T ss_pred CCCEEEEeC
Confidence 999999843
No 264
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=81.79 E-value=25 Score=30.46 Aligned_cols=153 Identities=18% Similarity=0.153 Sum_probs=86.3
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCC------------CCCHH---HHHHHHh-cCC-eEEEeC
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFL------------CRQTD---LLVAAAK-TGK-IINIKK 66 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~------------~~n~~---LL~~~a~-~gk-PVilst 66 (219)
+..|++..++-...++-++||..+...+++. +|++-+|+.. ++-.+ ..+++++ +.. ||+.-+
T Consensus 6 ~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~ 85 (275)
T 1o66_A 6 VNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDL 85 (275)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEEC
Confidence 3456666666667788899999999999999 9999888531 22223 3344444 343 677888
Q ss_pred CCCC---CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCcc
Q 027740 67 GQFC---ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVA 143 (219)
Q Consensus 67 G~~~---t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~ 143 (219)
+... ++++....+..+...|.. -+=+|-+.. -...|..+.+.++||+..---+.|+.+. .++=+.
T Consensus 86 pfgsy~~s~~~a~~na~rl~kaGa~-aVklEdg~e--------~~~~I~al~~agIpV~gHiGLtPQs~~~---~ggf~v 153 (275)
T 1o66_A 86 PFGAYQQSKEQAFAAAAELMAAGAH-MVKLEGGVW--------MAETTEFLQMRGIPVCAHIGLTPQSVFA---FGGYKV 153 (275)
T ss_dssp CTTSSSSCHHHHHHHHHHHHHTTCS-EEEEECSGG--------GHHHHHHHHHTTCCEEEEEESCGGGTTC---------
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCc-EEEECCcHH--------HHHHHHHHHHcCCCeEeeeccCceeecc---cCCeEE
Confidence 8742 466655544445447763 455665421 1244555555788986210011111000 000000
Q ss_pred CCCC---cccHHHHHHHHHHcCCcEEEEee
Q 027740 144 SGGL---RELIPCIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 144 ~~G~---~~~~~~~~~aAvalGA~GlvIEk 170 (219)
-|+ .+-+..-+++-..+||+++|+|.
T Consensus 154 -~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 154 -QGRGGKAQALLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp ------CHHHHHHHHHHHHHTTCSEEEEES
T ss_pred -EeChHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 011 12233446677899999999997
No 265
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=81.76 E-value=7.8 Score=33.50 Aligned_cols=136 Identities=14% Similarity=0.082 Sum_probs=80.5
Q ss_pred ccccccCCCCCC--CHHHHHHHHhcCC--e-EEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC----CCCCCCc
Q 027740 36 ADIIQIPAFLCR--QTDLLVAAAKTGK--I-INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF----GYNDLIV 106 (219)
Q Consensus 36 vd~~kI~S~~~~--n~~LL~~~a~~gk--P-VilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~----~~~~~~~ 106 (219)
++.+-+|+.-.. ..+.++++.+..+ . ..+.+ . ..++++.+++.+...|.+.+.+.-..|.. +... +.
T Consensus 41 v~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~~--~-~~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~-s~ 116 (293)
T 3ewb_X 41 IDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGLAR--C-VEGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKM-SR 116 (293)
T ss_dssp CSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEEE--S-SHHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCC-CH
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHhcCCCEEEEEec--C-CHHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCC-CH
Confidence 555555543332 2344555555332 1 12322 2 57889999998887888778877666531 1110 01
Q ss_pred --cc----hhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCC
Q 027740 107 --DP----RNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVD 180 (219)
Q Consensus 107 --nl----~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D 180 (219)
.+ ..+...|+.+..|.|++..+. .-..+++..++.++..+|++-+ .++|
T Consensus 117 ~e~l~~~~~~v~~a~~~g~~v~~~~~d~~---------------~~~~~~~~~~~~~~~~~G~~~i----------~l~D 171 (293)
T 3ewb_X 117 AEVLASIKHHISYARQKFDVVQFSPEDAT---------------RSDRAFLIEAVQTAIDAGATVI----------NIPD 171 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEEEETGG---------------GSCHHHHHHHHHHHHHTTCCEE----------EEEC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeccCC---------------CCCHHHHHHHHHHHHHcCCCEE----------EecC
Confidence 11 122233445777777443220 0124566777888999999832 2578
Q ss_pred CCCCCChHHHHHHHHHHHHH
Q 027740 181 GPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 181 ~~~sl~p~el~~lv~~ir~i 200 (219)
-.-.++|.++.++++.+++.
T Consensus 172 T~G~~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 172 TVGYTNPTEFGQLFQDLRRE 191 (293)
T ss_dssp SSSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHh
Confidence 88899999999999887753
No 266
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=81.49 E-value=5.9 Score=35.01 Aligned_cols=81 Identities=10% Similarity=-0.010 Sum_probs=57.6
Q ss_pred HHHHHhcCCCeEeeeCCcccHHHHhhh-cccccc-CC------CC-----------CCCHHHHHHHHh-cCCeEEEeCCC
Q 027740 9 EKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQI-PA------FL-----------CRQTDLLVAAAK-TGKIINIKKGQ 68 (219)
Q Consensus 9 ~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI-~S------~~-----------~~n~~LL~~~a~-~gkPVilstG~ 68 (219)
.+..++.|++++.++.+++.+..+.+. +|++.+ +. +. .....+++++.+ .+.||+..-|.
T Consensus 138 i~~~~~~g~~v~~~v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI 217 (369)
T 3bw2_A 138 IARLRRAGTLTLVTATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGI 217 (369)
T ss_dssp HHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSC
T ss_pred HHHHHHCCCeEEEECCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCC
Confidence 334456789998888888888877777 999988 31 11 123788888765 58999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 69 FCASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 69 ~~t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
. +.+++..+++ .|. +.+.+=+
T Consensus 218 ~-~~~~~~~~l~----~GA-d~V~vGs 238 (369)
T 3bw2_A 218 M-RGGQIAAVLA----AGA-DAAQLGT 238 (369)
T ss_dssp C-SHHHHHHHHH----TTC-SEEEESH
T ss_pred C-CHHHHHHHHH----cCC-CEEEECh
Confidence 8 8998887755 464 4444433
No 267
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=81.46 E-value=15 Score=30.59 Aligned_cols=142 Identities=10% Similarity=0.024 Sum_probs=79.8
Q ss_pred HHHHHHHHHHhc-CCCeEeeeCCcccHHHHhhh--ccccccCCCCCC-C-HHHHH---HHHhcCCeEEEeCCCCCCHHHH
Q 027740 4 GLKILEKVKIAY-DIPIVTDVHETVQCEEVGKV--ADIIQIPAFLCR-Q-TDLLV---AAAKTGKIINIKKGQFCASSVM 75 (219)
Q Consensus 4 gl~~L~~~~~~~-Gi~~~tt~~d~~~~~~l~~~--vd~~kI~S~~~~-n-~~LL~---~~a~~gkPVilstG~~~t~~ei 75 (219)
|.+.+++.++.. +.++-+..+=..--+++..+ +|++-+=..... + ...++ ++-+.|+-+.++..+. |+.|.
T Consensus 51 G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~-tp~~~ 129 (227)
T 1tqx_A 51 GPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPK-TDVQK 129 (227)
T ss_dssp CHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTTSSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTT-SCGGG
T ss_pred CHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHhCCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCC-CcHHH
Confidence 566666666655 56665543333222333333 444422222222 2 35677 7778899999998777 66443
Q ss_pred HHHHHHHHHcCCCcEEEEeecCCCCCCCCC---ccchhHHHHHh-c-CCCEEEcCCCCCCCCCCCccCCCCccCCCCccc
Q 027740 76 VNSAEKVRLAGNPNVMVCERGTMFGYNDLI---VDPRNLEWMRE-A-NCPVVADVTHSLQQPAGKKLDGGGVASGGLREL 150 (219)
Q Consensus 76 ~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~---~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~ 150 (219)
. +.+...|.-+.+++-++-- ++.... -.+.-|..+|+ . +++|.+| ||..
T Consensus 130 ~---~~~l~~g~~D~VlvmsV~p-Gf~gq~f~~~~l~ki~~lr~~~~~~~I~Vd--------------------GGI~-- 183 (227)
T 1tqx_A 130 L---VPILDTNLINTVLVMTVEP-GFGGQSFMHDMMGKVSFLRKKYKNLNIQVD--------------------GGLN-- 183 (227)
T ss_dssp G---HHHHTTTCCSEEEEESSCT-TCSSCCCCGGGHHHHHHHHHHCTTCEEEEE--------------------SSCC--
T ss_pred H---HHHhhcCCcCEEEEeeecc-CCCCcccchHHHHHHHHHHHhccCCeEEEE--------------------CCCC--
Confidence 3 3344445457777766431 222111 23455667776 4 7888776 2322
Q ss_pred HHHHHHHHHHcCCcEEEEeeecC
Q 027740 151 IPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 151 ~~~~~~aAvalGA~GlvIEkH~t 173 (219)
......++++|||.++.=+-++
T Consensus 184 -~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 184 -IETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp -HHHHHHHHHHTCCEEEESHHHH
T ss_pred -HHHHHHHHHcCCCEEEEeHHHh
Confidence 4456677899999877765543
No 268
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=81.45 E-value=3.3 Score=37.13 Aligned_cols=79 Identities=15% Similarity=0.157 Sum_probs=60.2
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcccHHHHhhh-ccccccCCCC-------CCCHHHHHHHHh-cCCeEEEeCCCCCCHHH
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETVQCEEVGKV-ADIIQIPAFL-------CRQTDLLVAAAK-TGKIINIKKGQFCASSV 74 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~-------~~n~~LL~~~a~-~gkPVilstG~~~t~~e 74 (219)
.+.++++++..++|++. .+..++.+..+.+. +|.+.|+..- ..+.+++.++.+ .+.||+.+-|.. +.++
T Consensus 214 ~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pVia~GGI~-~~~d 292 (380)
T 1p4c_A 214 WEALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLIDSGFR-RGSD 292 (380)
T ss_dssp HHHHHHHHHHCCSEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCEEECSSCC-SHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeEEEECCCC-CHHH
Confidence 45788888999999884 67888899988888 9999995421 123556666655 577999999999 9999
Q ss_pred HHHHHHHHHHcCCC
Q 027740 75 MVNSAEKVRLAGNP 88 (219)
Q Consensus 75 i~~A~e~i~~~Gn~ 88 (219)
+..++. .|..
T Consensus 293 v~kal~----~GAd 302 (380)
T 1p4c_A 293 IVKALA----LGAE 302 (380)
T ss_dssp HHHHHH----TTCS
T ss_pred HHHHHH----hCCc
Confidence 988764 4654
No 269
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=81.44 E-value=10 Score=31.82 Aligned_cols=91 Identities=9% Similarity=0.020 Sum_probs=60.1
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--cc----cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TV----QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~----~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++....+ ++ .++.+.+. +|.+-+.+......++.+.+.+.+.||++-.....
T Consensus 82 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V 161 (338)
T 3dbi_A 82 LFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSV 161 (338)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSCCSSSGGGEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCCCCCCCCCEE
Confidence 456778899999887664433 22 22333333 78777766665556677777778899776432210
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
...-...+++++.+.|..+|.++..
T Consensus 162 ~~D~~~~~~~a~~~L~~~G~~~I~~i~~ 189 (338)
T 3dbi_A 162 WCDHKQTSFNAVAELINAGHQEIAFLTG 189 (338)
T ss_dssp CBCHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred EEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 2344667888999999999988854
No 270
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=81.39 E-value=5.9 Score=35.16 Aligned_cols=94 Identities=15% Similarity=0.093 Sum_probs=54.3
Q ss_pred HHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEe-ecC----CC--CCCCCCccchhHHHHH---h-
Q 027740 50 DLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCE-RGT----MF--GYNDLIVDPRNLEWMR---E- 116 (219)
Q Consensus 50 ~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~-cgs----~~--~~~~~~~nl~~i~~lk---~- 116 (219)
+.++++-+. +.||++++.+ |.++...++ +.|..-|.+-- -|+ .+ ++. .-.+.+++.+. .
T Consensus 150 ~~i~~lr~~~~~~~vi~g~v~--t~e~A~~a~----~aGaD~I~v~~g~G~~~~~r~~~g~~--~p~~~~l~~v~~~~~~ 221 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAGNVV--TGEMVEELI----LSGADIIKVGIGPGSVCTTRKKTGVG--YPQLSAVMECADAAHG 221 (351)
T ss_dssp HHHHHHHHHCTTSEEEEEEEC--SHHHHHHHH----HTTCSEEEECSSCSTTBCHHHHHCBC--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEeCC--CHHHHHHHH----HhCCCEEEECCCCCcCcCccccCCCC--ccHHHHHHHHHHHHhh
Confidence 455555443 7899998764 577776654 46776554421 111 00 001 01234444443 2
Q ss_pred cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 117 ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 117 ~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
.++||+.|. |.+. ..-...|.++||++++|=+-|.
T Consensus 222 ~~ipvIa~G--------------------GI~~--g~di~kAlalGA~~V~vG~~fl 256 (351)
T 2c6q_A 222 LKGHIISDG--------------------GCSC--PGDVAKAFGAGADFVMLGGMLA 256 (351)
T ss_dssp TTCEEEEES--------------------CCCS--HHHHHHHHHTTCSEEEESTTTT
T ss_pred cCCcEEEeC--------------------CCCC--HHHHHHHHHcCCCceeccHHHh
Confidence 579998752 3222 3345689999999999988775
No 271
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=81.29 E-value=7.9 Score=31.82 Aligned_cols=51 Identities=12% Similarity=-0.031 Sum_probs=37.1
Q ss_pred CHHHHHHHHhc-CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 027740 48 QTDLLVAAAKT-GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM 98 (219)
Q Consensus 48 n~~LL~~~a~~-gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~ 98 (219)
-.++++.+.+. |+||++-+|.....+......+.+.+..+-+++++|+|..
T Consensus 132 ~~~~~~~a~~~~~lpv~iH~~~~~~~~~~~~~~~~l~~~p~l~iv~~H~G~~ 183 (272)
T 3cjp_A 132 LKPIFKYSMDSGSLPIWIHAFNPLVLQDIKEIAELCKAFPKVPVILGHMGGS 183 (272)
T ss_dssp GHHHHHHHHHTTCCCEEECCSTTCCHHHHHHHHHHHHHSTTSCEEEGGGGGG
T ss_pred HHHHHHHHHhccCCcEEEeCCCCCccccHHHHHHHHHHCCCceEEEECCCCc
Confidence 46899999999 9999999986433344445555566555556999999874
No 272
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=81.23 E-value=2.9 Score=35.13 Aligned_cols=102 Identities=19% Similarity=0.195 Sum_probs=69.0
Q ss_pred hHHHHHHHHHHhcCCCeE--eeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCC------eEEEeCCCCCCHH
Q 027740 3 EGLKILEKVKIAYDIPIV--TDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGK------IINIKKGQFCASS 73 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~--tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gk------PVilstG~~~t~~ 73 (219)
.+++.+++.+++++-.++ -|+.+.++++.+.+. .+|+-.+. .|.++++++-+.+. |++= |.+ |++
T Consensus 50 ~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~---~~~evi~~~~~~~v~~~~~~~~~P--G~~-Tpt 123 (217)
T 3lab_A 50 AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG---LTPELIEKAKQVKLDGQWQGVFLP--GVA-TAS 123 (217)
T ss_dssp THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS---CCHHHHHHHHHHHHHCSCCCEEEE--EEC-SHH
T ss_pred cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC---CcHHHHHHHHHcCCCccCCCeEeC--CCC-CHH
Confidence 356677777777653332 288888888888877 88877665 57888888888888 7775 666 899
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCc-cchhHHHHHh-c-CCCEE
Q 027740 74 VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIV-DPRNLEWMRE-A-NCPVV 122 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~-nl~~i~~lk~-~-~~pV~ 122 (219)
|+..|.+ .|..-+-+ ||.. .+ .+..|..++. + ++|++
T Consensus 124 E~~~A~~----~Gad~vK~------FPa~--~~gG~~~lkal~~p~p~i~~~ 163 (217)
T 3lab_A 124 EVMIAAQ----AGITQLKC------FPAS--AIGGAKLLKAWSGPFPDIQFC 163 (217)
T ss_dssp HHHHHHH----TTCCEEEE------TTTT--TTTHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHH----cCCCEEEE------Cccc--cccCHHHHHHHHhhhcCceEE
Confidence 9888844 56654422 3332 22 3566777776 5 67775
No 273
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=81.15 E-value=14 Score=33.17 Aligned_cols=129 Identities=13% Similarity=0.067 Sum_probs=68.7
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVR 83 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~ 83 (219)
+=..|.+.|++.|+...+.-.... +++ .+ ..++ ..++.. -+.|++-+-|...+.++...+++.+
T Consensus 104 in~~lA~~a~~~G~~~~vGs~~~~----le~-~~---~~~~-----~v~r~~--P~~~~ianig~~~~~e~~~~~ve~~- 167 (365)
T 3sr7_A 104 VNEKLAQVADTCGLLFVTGSYSTA----LKN-PD---DTSY-----QVKKSR--PHLLLATNIGLDKPYQAGLQAVRDL- 167 (365)
T ss_dssp HHHHHHHHHHHHTCCEEC--------------------------------------CCEEEEEETTSCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHcCCCeeccccccc----ccC-cc---ccce-----EehhhC--CCCcEEEEeCCCCCHHHHHHHHHhc-
Confidence 345688999999999887433220 110 00 0122 222322 3567776666665677777777755
Q ss_pred HcCCCcEEEEeecCC--CCCCCCCccc----hhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHH
Q 027740 84 LAGNPNVMVCERGTM--FGYNDLIVDP----RNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIAR 156 (219)
Q Consensus 84 ~~Gn~~i~L~~cgs~--~~~~~~~~nl----~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 156 (219)
|.. ...+|-... .-.|..+.|+ ..|.++++ .++||++--.-. |. -...++
T Consensus 168 --~ad-al~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~-----------------g~---s~e~A~ 224 (365)
T 3sr7_A 168 --QPL-FLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGF-----------------GM---DVKTIQ 224 (365)
T ss_dssp --CCS-CEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSS-----------------CC---CHHHHH
T ss_pred --CCC-EEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCC-----------------CC---CHHHHH
Confidence 433 334554321 1011112344 56788888 899999842110 11 156788
Q ss_pred HHHHcCCcEEEEeee
Q 027740 157 TAIAVGVDGVFMEVH 171 (219)
Q Consensus 157 aAvalGA~GlvIEkH 171 (219)
.+..+|||++.+--|
T Consensus 225 ~l~~aGad~I~V~g~ 239 (365)
T 3sr7_A 225 TAIDLGVKTVDISGR 239 (365)
T ss_dssp HHHHHTCCEEECCCB
T ss_pred HHHHcCCCEEEEeCC
Confidence 999999999888666
No 274
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=80.39 E-value=5 Score=37.84 Aligned_cols=156 Identities=15% Similarity=0.130 Sum_probs=95.8
Q ss_pred HHHHHHHHHHhcCCCeEe--eeCCccc-----------HHHHhhh-ccccccCCCCCC-------------CHHHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVT--DVHETVQ-----------CEEVGKV-ADIIQIPAFLCR-------------QTDLLVAAA 56 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~t--t~~d~~~-----------~~~l~~~-vd~~kI~S~~~~-------------n~~LL~~~a 56 (219)
.++.+++.+++..+++.. -+.+.++ ++.+.+. +|.+-|++.... |.+++++++
T Consensus 315 ~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~ 394 (555)
T 1jvn_A 315 MLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETIS 394 (555)
T ss_dssp HHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHH
Confidence 377888998988998873 4566644 7777777 999999988755 568898887
Q ss_pred hc-CC-eEEEeCCC-----------------------C-------------------CCHHHHHHHHHHHHHcCCCcEEE
Q 027740 57 KT-GK-IINIKKGQ-----------------------F-------------------CASSVMVNSAEKVRLAGNPNVMV 92 (219)
Q Consensus 57 ~~-gk-PVilstG~-----------------------~-------------------~t~~ei~~A~e~i~~~Gn~~i~L 92 (219)
+. |. -|+++-.. . .+..| -++.+.+.|...| +
T Consensus 395 ~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e---~a~~~~~~Ga~~i-l 470 (555)
T 1jvn_A 395 KAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWE---LTRACEALGAGEI-L 470 (555)
T ss_dssp HHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHH---HHHHHHHTTCCEE-E
T ss_pred HHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEEEEEecCccCCCCCHHH---HHHHHHHcCCCEE-E
Confidence 73 42 24333221 0 11223 3444566788766 5
Q ss_pred EeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHH-cCCcEEEEee
Q 027740 93 CERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIA-VGVDGVFMEV 170 (219)
Q Consensus 93 ~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAva-lGA~GlvIEk 170 (219)
+|..+.=+.- .-.|+..+..+++ .++||+....-+ . ..-...+.. .|++|+++=+
T Consensus 471 ~t~~~~dG~~-~G~d~~li~~l~~~~~iPVIasGGi~-----------------s-----~~d~~~~~~~~G~~gvivg~ 527 (555)
T 1jvn_A 471 LNCIDKDGSN-SGYDLELIEHVKDAVKIPVIASSGAG-----------------V-----PEHFEEAFLKTRADACLGAG 527 (555)
T ss_dssp ECCGGGTTTC-SCCCHHHHHHHHHHCSSCEEECSCCC-----------------S-----HHHHHHHHHHSCCSEEEESH
T ss_pred EeCCCCCCCC-CCCCHHHHHHHHHhCCccEEEECCCC-----------------C-----HHHHHHHHHhcCChHHHHHH
Confidence 6654431111 1247888888888 899998732211 1 222334444 7999999876
Q ss_pred ecCCCCCCCCCCCCCChHHHHHHH
Q 027740 171 HDDPLNAPVDGPTQWPLRNLEELL 194 (219)
Q Consensus 171 H~t~d~a~~D~~~sl~p~el~~lv 194 (219)
-+ +.-.++..++++++
T Consensus 528 a~--------~~~~~~~~e~~~~l 543 (555)
T 1jvn_A 528 MF--------HRGEFTVNDVKEYL 543 (555)
T ss_dssp HH--------HTTSCCHHHHHHHH
T ss_pred HH--------HcCCCCHHHHHHHH
Confidence 43 33345666666654
No 275
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=80.36 E-value=15 Score=37.74 Aligned_cols=99 Identities=19% Similarity=0.198 Sum_probs=68.5
Q ss_pred HHHHHHHhcCCeEEEe--C---------CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c
Q 027740 50 DLLVAAAKTGKIINIK--K---------GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A 117 (219)
Q Consensus 50 ~LL~~~a~~gkPVils--t---------G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~ 117 (219)
+.++++-+.|+.|... . |.. +++.+...++.+.+.|...|.||.-... ..|. .+ ..-+..+|+ +
T Consensus 676 ~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~-~~~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~-~~-~~lv~~l~~~~ 751 (1165)
T 2qf7_A 676 VSMDAIAEENKLCEAAICYTGDILNSARPKY-DLKYYTNLAVELEKAGAHIIAVKDMAGL-LKPA-AA-KVLFKALREAT 751 (1165)
T ss_dssp HHHHHHHHTTCEEEEEEECCSCTTCTTSGGG-CHHHHHHHHHHHHHTTCSEEEEEETTCC-CCHH-HH-HHHHHHHHHHC
T ss_pred HHHHHHHhccceEEEEEEEeccccCCCCCCC-CHHHHHHHHHHHHHcCCCEEEEeCccCC-cCHH-HH-HHHHHHHHHhc
Confidence 4566666778876543 2 223 7888999999999999988888875442 1222 12 244667777 8
Q ss_pred CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 118 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 118 ~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
++||++ +.|-. .| +...-+++|+.+||+ .|+.-..
T Consensus 752 ~~~i~~-H~Hnd---------------~G---lAvAn~laAv~aGa~--~vd~ti~ 786 (1165)
T 2qf7_A 752 GLPIHF-HTHDT---------------SG---IAAATVLAAVEAGVD--AVDAAMD 786 (1165)
T ss_dssp SSCEEE-EECBT---------------TS---CHHHHHHHHHHTTCS--EEEEBCG
T ss_pred CCeEEE-EECCC---------------CC---HHHHHHHHHHHhCCC--EEEeccc
Confidence 999999 88863 24 225568899999999 8887544
No 276
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=80.20 E-value=9.4 Score=31.14 Aligned_cols=90 Identities=8% Similarity=-0.073 Sum_probs=60.9
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc------cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV------QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~------~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++....+.. .++.+.+. +|.+-+.+.+. +.+.++.+.+.+.||++=.....
T Consensus 27 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V 105 (291)
T 3egc_A 27 ASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG-EHDYLRTELPKTFPIVAVNRELRIPGCGAV 105 (291)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS-CCHHHHHSSCTTSCEEEESSCCCCTTCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHhhccCCCEEEEecccCCCCCCEE
Confidence 45678889999998877554322 12223333 77766665555 66788888888999886543221
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
...-...+++++.+.|..+|.++..
T Consensus 106 ~~D~~~~g~~a~~~L~~~G~~~i~~i~~ 133 (291)
T 3egc_A 106 LSENVRGARTAVEYLIARGHTRIGAIVG 133 (291)
T ss_dssp EECHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EECcHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 2345667888999999999988854
No 277
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=79.90 E-value=5.8 Score=37.01 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=58.4
Q ss_pred HHHHHHHHHhcC-CCeEe-eeCCcccHHHHhhh-ccccccCCCC-------------CCCHHHHHHH----HhcCCeEEE
Q 027740 5 LKILEKVKIAYD-IPIVT-DVHETVQCEEVGKV-ADIIQIPAFL-------------CRQTDLLVAA----AKTGKIINI 64 (219)
Q Consensus 5 l~~L~~~~~~~G-i~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~-------------~~n~~LL~~~----a~~gkPVil 64 (219)
++.+++.+++++ ++++. ++.+.+.+..+.+. +|++++|..- .-+...+..+ .+.+.|||.
T Consensus 285 ~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa 364 (511)
T 3usb_A 285 IDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIA 364 (511)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEE
T ss_pred hhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEE
Confidence 457777778775 77776 89999999999988 9999874321 3345555444 235899999
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCC
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~ 88 (219)
+=|.. +..++..|+. .|..
T Consensus 365 ~GGI~-~~~di~kala----~GA~ 383 (511)
T 3usb_A 365 DGGIK-YSGDMVKALA----AGAH 383 (511)
T ss_dssp ESCCC-SHHHHHHHHH----TTCS
T ss_pred eCCCC-CHHHHHHHHH----hCch
Confidence 99999 9999998854 4654
No 278
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=79.90 E-value=4.8 Score=35.92 Aligned_cols=73 Identities=16% Similarity=0.111 Sum_probs=55.1
Q ss_pred HHHHHHHhcCCCeEe-eeCCcccHHHHhhh-ccccccCCC----------CCCCHHHHHHHHh--------cC---CeEE
Q 027740 7 ILEKVKIAYDIPIVT-DVHETVQCEEVGKV-ADIIQIPAF----------LCRQTDLLVAAAK--------TG---KIIN 63 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~----------~~~n~~LL~~~a~--------~g---kPVi 63 (219)
.+.+.+++.++|++. .+.+++++..+.+. +|.+.++.+ -..+...|.++.+ .+ .||+
T Consensus 202 ~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvi 281 (393)
T 2qr6_A 202 NLKEFIGSLDVPVIAGGVNDYTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHII 281 (393)
T ss_dssp CHHHHHHHCSSCEEEECCCSHHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEE
T ss_pred HHHHHHHhcCCCEEECCcCCHHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEE
Confidence 356677788999987 78888899988888 999999661 1334555544433 34 8999
Q ss_pred EeCCCCCCHHHHHHHHH
Q 027740 64 IKKGQFCASSVMVNSAE 80 (219)
Q Consensus 64 lstG~~~t~~ei~~A~e 80 (219)
.+-|.. +..++..|+.
T Consensus 282 a~GGI~-~~~dv~kala 297 (393)
T 2qr6_A 282 ADGSIE-NSGDVVKAIA 297 (393)
T ss_dssp ECSSCC-SHHHHHHHHH
T ss_pred EECCCC-CHHHHHHHHH
Confidence 999999 9999888764
No 279
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=79.78 E-value=24 Score=28.99 Aligned_cols=90 Identities=9% Similarity=-0.013 Sum_probs=60.7
Q ss_pred HHHHHHHHHhcCCCeEeeeCCc--c----cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHET--V----QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~--~----~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++....+. + .++.+.+. +|.+-+.+.+..+.+.++.+.+ +.||++=.....
T Consensus 34 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~~~~~~~~V~ 112 (303)
T 3kke_A 34 FSGVQMAASGHSTDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSRVPGRVGSVI 112 (303)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCCCTTCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCcCCCCCCEEE
Confidence 5567888999999887654433 2 22333333 7877777666665437888888 999987543221
Q ss_pred --CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 --ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 --t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...|++++.+.|..+|.++..
T Consensus 113 ~D~~~~g~~a~~~L~~~G~~~I~~i~~ 139 (303)
T 3kke_A 113 LDDQKGGGIATEHLITLGHSRIAFISG 139 (303)
T ss_dssp ECHHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred ECcHHHHHHHHHHHHHCCCCeEEEEeC
Confidence 2345667888999999999988763
No 280
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=79.72 E-value=12 Score=32.94 Aligned_cols=20 Identities=5% Similarity=0.032 Sum_probs=9.1
Q ss_pred HhcCCCeEeeeCCcccHHHH
Q 027740 13 IAYDIPIVTDVHETVQCEEV 32 (219)
Q Consensus 13 ~~~Gi~~~tt~~d~~~~~~l 32 (219)
+++|+.++-+|+.+.+.+.+
T Consensus 215 ~~~~i~~iEqP~~~~d~~~~ 234 (371)
T 2ovl_A 215 APFDLHWIEEPTIPDDLVGN 234 (371)
T ss_dssp GGGCCSEEECCSCTTCHHHH
T ss_pred HhcCCCEEECCCCcccHHHH
Confidence 44455555444444444433
No 281
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=79.70 E-value=5.8 Score=34.22 Aligned_cols=79 Identities=22% Similarity=0.251 Sum_probs=54.4
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccC
Q 027740 60 KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLD 138 (219)
Q Consensus 60 kPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~ 138 (219)
..|||.||.- |.+|+..|++.....|-. ++-..|-|.+.. ..+..+..|++ .+.+|++
T Consensus 161 lKVIlEt~~L-t~eei~~A~~ia~eaGAD---fVKTSTGf~~~G--AT~edV~lm~~~vg~~v~V--------------- 219 (260)
T 3r12_A 161 VKVIIETCYL-DTEEKIAACVISKLAGAH---FVKTSTGFGTGG--ATAEDVHLMKWIVGDEMGV--------------- 219 (260)
T ss_dssp EEEECCGGGC-CHHHHHHHHHHHHHTTCS---EEECCCSSSSCC--CCHHHHHHHHHHHCTTSEE---------------
T ss_pred EEEEEeCCCC-CHHHHHHHHHHHHHhCcC---EEEcCCCCCCCC--CCHHHHHHHHHHhCCCceE---------------
Confidence 4679999977 999999999999988875 334333342222 45677888888 6666665
Q ss_pred CCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 139 GGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 139 ~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
|.+||.|.. .-+++-+.+||+
T Consensus 220 ---KaAGGIrt~--~~al~mi~aGA~ 240 (260)
T 3r12_A 220 ---KASGGIRTF--EDAVKMIMYGAD 240 (260)
T ss_dssp ---EEESSCCSH--HHHHHHHHTTCS
T ss_pred ---EEeCCCCCH--HHHHHHHHcCCc
Confidence 223566654 345566899997
No 282
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=79.62 E-value=23 Score=28.59 Aligned_cols=91 Identities=10% Similarity=0.063 Sum_probs=60.9
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc------cHHHHhhh-ccccccCCCCC----CCHHHHHHHHhcCCeEEEeCCCCC---
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV------QCEEVGKV-ADIIQIPAFLC----RQTDLLVAAAKTGKIINIKKGQFC--- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~------~~~~l~~~-vd~~kI~S~~~----~n~~LL~~~a~~gkPVilstG~~~--- 70 (219)
+.-+.+.+++.|..++....+.. .++.+.+. +|.+-+.+.+. .+.++++.+.+.+.||++=.....
T Consensus 34 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~ 113 (298)
T 3tb6_A 34 IRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASYAELA 113 (298)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSCCTTCS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecCcCCCC
Confidence 45677889999988777554322 12223233 77666655443 467889999999999987543221
Q ss_pred -------CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 -------ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 -------t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 114 ~~~V~~d~~~~~~~a~~~L~~~G~~~i~~i~~ 145 (298)
T 3tb6_A 114 APSFTLDDVKGGMMAAEHLLSLGHTHMMGIFK 145 (298)
T ss_dssp SCEEEECHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCEEEeCcHHHHHHHHHHHHHCCCCcEEEEcC
Confidence 2344667888999999999988754
No 283
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=79.50 E-value=8 Score=34.71 Aligned_cols=75 Identities=12% Similarity=0.084 Sum_probs=51.0
Q ss_pred HHHHHHHHHhcCCCeEee-e---CCcccHHHHhhh-ccccccCCCCCCC----------------------HHHHHHHHh
Q 027740 5 LKILEKVKIAYDIPIVTD-V---HETVQCEEVGKV-ADIIQIPAFLCRQ----------------------TDLLVAAAK 57 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt-~---~d~~~~~~l~~~-vd~~kI~S~~~~n----------------------~~LL~~~a~ 57 (219)
++.++++++..++|++.- + .+++.+..+.+. +|++.|+..-=++ ...|..+..
T Consensus 195 ~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~ 274 (365)
T 3sr7_A 195 KKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQP 274 (365)
T ss_dssp HHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGG
T ss_pred HHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHH
Confidence 367888888999999985 6 788888888888 9999885431111 133444444
Q ss_pred c--CCeEEEeCCCCCCHHHHHHHHH
Q 027740 58 T--GKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 58 ~--gkPVilstG~~~t~~ei~~A~e 80 (219)
. +.||+.+-|.. +..|+..|+.
T Consensus 275 ~~~~ipvia~GGI~-~g~Dv~KaLa 298 (365)
T 3sr7_A 275 LMDKVEILASGGIR-HPLDIIKALV 298 (365)
T ss_dssp GTTTSEEEECSSCC-SHHHHHHHHH
T ss_pred hcCCCeEEEeCCCC-CHHHHHHHHH
Confidence 3 46777777777 7777666643
No 284
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=79.22 E-value=8.4 Score=33.34 Aligned_cols=74 Identities=19% Similarity=0.198 Sum_probs=44.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC----CCCccchhHHHHHh---cCCCEEEcCCCCCCCCCCCccCCCC
Q 027740 69 FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN----DLIVDPRNLEWMRE---ANCPVVADVTHSLQQPAGKKLDGGG 141 (219)
Q Consensus 69 ~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~----~~~~nl~~i~~lk~---~~~pV~~ds~Hs~~~~~~~~~~~~~ 141 (219)
..+.+++..-++...+.|-.=|=+.=..+..+.+ .+++. |.++.++. .++||.+|+.+
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~-Rv~pvi~~l~~~~~piSIDT~~-------------- 89 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETS-RVIPVVKELAAQGITVSIDTMR-------------- 89 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------HH-HHHHHHHHHHHTTCCEEEECSC--------------
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHH-HHHHHHHHhhcCCCEEEEeCCC--------------
Confidence 4478888888888888898644444322222221 23333 55666655 38999998665
Q ss_pred ccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 142 VASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 142 ~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+.++++|+..||+ +|.
T Consensus 90 ----------~~va~aAl~aGa~--iIN 105 (280)
T 1eye_A 90 ----------ADVARAALQNGAQ--MVN 105 (280)
T ss_dssp ----------HHHHHHHHHTTCC--EEE
T ss_pred ----------HHHHHHHHHcCCC--EEE
Confidence 4567777777877 665
No 285
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=79.21 E-value=4.1 Score=36.94 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhcCCCeEeee-CCcccHHHHhhh-ccccccCCCCCCCH----HHHHHHHhcCCeEEEe------------
Q 027740 4 GLKILEKVKIAYDIPIVTDV-HETVQCEEVGKV-ADIIQIPAFLCRQT----DLLVAAAKTGKIINIK------------ 65 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~-~d~~~~~~l~~~-vd~~kI~S~~~~n~----~LL~~~a~~gkPVils------------ 65 (219)
.-+.|.+.+++..+|++.++ ||+.-+....+. +|.+-|-.+++-.. .+++++.+.++||-+=
T Consensus 72 ~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~ 151 (366)
T 3noy_A 72 DVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLE 151 (366)
T ss_dssp HHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHH
Confidence 35667788888999999997 999888887888 99999998888653 6788888899999883
Q ss_pred -CCCCCCHHHHHHH----HHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEE
Q 027740 66 -KGQFCASSVMVNS----AEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVA 123 (219)
Q Consensus 66 -tG~~~t~~ei~~A----~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ 123 (219)
-|.- +++.+.++ ++.+.+.|-.++++-.-.|. .. .-+.+-..|.+ .++|+-+
T Consensus 152 ~yg~~-~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~--v~---~~i~ayr~la~~~dyPLHl 209 (366)
T 3noy_A 152 KYGYP-SAEALAESALRWSEKFEKWGFTNYKVSIKGSD--VL---QNVRANLIFAERTDVPLHI 209 (366)
T ss_dssp HHSSC-CHHHHHHHHHHHHHHHHHTTCCCEEEEEECSS--HH---HHHHHHHHHHHHCCCCEEE
T ss_pred hcCCC-CHHHHHHHHHHHHHHHHhCCCCeEEEeeecCC--hH---HHHHHHHHHHhccCCCEEE
Confidence 1222 55555443 34567778888876554432 00 11233333444 6778655
No 286
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=79.17 E-value=14 Score=30.39 Aligned_cols=90 Identities=7% Similarity=-0.089 Sum_probs=61.4
Q ss_pred HHHHHHHHHhcCCCeEeeeCCc--cc---HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC--------
Q 027740 5 LKILEKVKIAYDIPIVTDVHET--VQ---CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC-------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~--~~---~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~-------- 70 (219)
+.-+.+.+++.|..++....+. .. ++.+.+. +|.+-+.+.+... +.++.+.+.+.||++=.....
T Consensus 29 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~~V~ 107 (294)
T 3qk7_A 29 ISWIGIELGKRGLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRSHLPKPYAWFD 107 (294)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCCCCSSCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCCCCCCCCCEEE
Confidence 4567788999998877644331 12 3334443 7877776666555 778888899999886432110
Q ss_pred --CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 --ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 --t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...|++++.+.|..+|.++..
T Consensus 108 ~D~~~~~~~a~~~L~~~G~~~I~~i~~ 134 (294)
T 3qk7_A 108 FDNHAGASLAVKRLLELGHQRIAFVST 134 (294)
T ss_dssp ECHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cChHHHHHHHHHHHHHCCCceEEEEeC
Confidence 2345677889999999999988864
No 287
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=79.16 E-value=18 Score=32.22 Aligned_cols=105 Identities=19% Similarity=0.121 Sum_probs=56.9
Q ss_pred ccccccC--CCCCC-CHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE-----eecCCC--CCCC
Q 027740 36 ADIIQIP--AFLCR-QTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC-----ERGTMF--GYND 103 (219)
Q Consensus 36 vd~~kI~--S~~~~-n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~-----~cgs~~--~~~~ 103 (219)
+|++.|. .++-. ..++++++.+. ++||++.... +.++...+ .+.|..-|++- +|.+.. +..
T Consensus 166 ~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~--~~~~a~~a----~~~Gad~I~vg~~~G~~~~~~~~~~~g- 238 (404)
T 1eep_A 166 VDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIV--TKEAALDL----ISVGADCLKVGIGPGSICTTRIVAGVG- 238 (404)
T ss_dssp CSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEEC--SHHHHHHH----HTTTCSEEEECSSCSTTSHHHHHHCCC-
T ss_pred CCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCC--cHHHHHHH----HhcCCCEEEECCCCCcCcCccccCCCC-
Confidence 6777762 22111 24556666665 8999995443 57666554 34676545441 111100 111
Q ss_pred CCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEee
Q 027740 104 LIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 104 ~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEk 170 (219)
.-++..+..+++ .++||+.+. |.+. ..-...+.++||++++|=+
T Consensus 239 -~p~~~~l~~v~~~~~~~~ipVia~G--------------------GI~~--~~d~~~ala~GAd~V~iG~ 286 (404)
T 1eep_A 239 -VPQITAICDVYEACNNTNICIIADG--------------------GIRF--SGDVVKAIAAGADSVMIGN 286 (404)
T ss_dssp -CCHHHHHHHHHHHHTTSSCEEEEES--------------------CCCS--HHHHHHHHHHTCSEEEECH
T ss_pred -cchHHHHHHHHHHHhhcCceEEEEC--------------------CCCC--HHHHHHHHHcCCCHHhhCH
Confidence 113445555543 478998752 2221 2345578889999999833
No 288
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=79.10 E-value=8.1 Score=32.36 Aligned_cols=117 Identities=14% Similarity=0.183 Sum_probs=75.0
Q ss_pred HHHHHHHHHhcCCCeEe--eeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhc-C-CeEEEe------CC------
Q 027740 5 LKILEKVKIAYDIPIVT--DVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKT-G-KIINIK------KG------ 67 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t--t~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~-g-kPVils------tG------ 67 (219)
+..+++.+++..+|+-. =+.+.++++.+-+. ++-.-|+|.-..|..|++++++. | .-++++ ++
T Consensus 64 ~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~ 143 (243)
T 4gj1_A 64 FALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVN 143 (243)
T ss_dssp HHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--
T ss_pred HHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEec
Confidence 46788889999988766 67888999988888 99999999999999999887763 3 112211 11
Q ss_pred --CCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEE
Q 027740 68 --QFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVA 123 (219)
Q Consensus 68 --~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ 123 (219)
.-.|--+....++.+.+.|...++ +.+...=+.- .=.|+..+..+++ + ++||++
T Consensus 144 gw~~~~~~~~~~~~~~~~~~g~~eil-~t~Id~DGt~-~G~d~~l~~~l~~~~~~ipvia 201 (243)
T 4gj1_A 144 AWQEASDKKLMEVLDFYSNKGLKHIL-CTDISKDGTM-QGVNVRLYKLIHEIFPNICIQA 201 (243)
T ss_dssp ------CCBHHHHHHHHHTTTCCEEE-EEETTC------CCCHHHHHHHHHHCTTSEEEE
T ss_pred CceecccchHHHHHHHHhhcCCcEEE-eeeecccccc-cCCCHHHHHHHHHhcCCCCEEE
Confidence 110111123344556677887664 4444321111 1147777888876 5 799987
No 289
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=79.06 E-value=15 Score=32.60 Aligned_cols=100 Identities=17% Similarity=0.144 Sum_probs=62.8
Q ss_pred HHHHHHHhc---CCeEEEeCCCC-------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCC---CC-CCCccchhHHHHH
Q 027740 50 DLLVAAAKT---GKIINIKKGQF-------CASSVMVNSAEKVRLAGNPNVMVCERGTMFG---YN-DLIVDPRNLEWMR 115 (219)
Q Consensus 50 ~LL~~~a~~---gkPVilstG~~-------~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~---~~-~~~~nl~~i~~lk 115 (219)
+.++++-+. ++||.++-... .+++|....++.+...|..-|.+-. +..++ .+ ....++..+..+|
T Consensus 213 eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~-g~~~~~~~~~~~~~~~~~~~~~ir 291 (363)
T 3l5l_A 213 ETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV-GFTIPDTNIPWGPAFMGPIAERVR 291 (363)
T ss_dssp HHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE-CCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec-CccccccccCCCcchhHHHHHHHH
Confidence 455555442 47999976531 3678888888889888876554443 32211 11 1124566777788
Q ss_pred h-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeeec
Q 027740 116 E-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 172 (219)
Q Consensus 116 ~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH~ 172 (219)
+ +++||+....-. . ...+..+++.| ||++.+=+.+
T Consensus 292 ~~~~iPVi~~GgI~-----------------s-----~e~a~~~l~~G~aD~V~iGR~~ 328 (363)
T 3l5l_A 292 REAKLPVTSAWGFG-----------------T-----PQLAEAALQANQLDLVSVGRAH 328 (363)
T ss_dssp HHHTCCEEECSSTT-----------------S-----HHHHHHHHHTTSCSEEECCHHH
T ss_pred HHcCCcEEEeCCCC-----------------C-----HHHHHHHHHCCCccEEEecHHH
Confidence 8 899998732211 1 45677888888 9977766553
No 290
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=78.82 E-value=19 Score=33.31 Aligned_cols=110 Identities=12% Similarity=0.027 Sum_probs=68.7
Q ss_pred cCCCeEeeeCCcccHHHHhh--h-ccc-c-ccCCCCCCCHHHHHHHHhcCCeEEEeC--CCCCC-------------HHH
Q 027740 15 YDIPIVTDVHETVQCEEVGK--V-ADI-I-QIPAFLCRQTDLLVAAAKTGKIINIKK--GQFCA-------------SSV 74 (219)
Q Consensus 15 ~Gi~~~tt~~d~~~~~~l~~--~-vd~-~-kI~S~~~~n~~LL~~~a~~gkPVilst--G~~~t-------------~~e 74 (219)
.++++.-+-++++-++...+ . +++ + -|.+ ...-.++..+++.|.||++-- |.--| .++
T Consensus 268 ~~vpISIDT~~~~VaeaAL~~~aGa~i~INDVsg--~~d~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~y~dvv~ev~~~ 345 (442)
T 3mcm_A 268 YKPLVSIDTRKLEVMQKILAKHHDIIWMINDVEC--NNIEQKAQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCDY 345 (442)
T ss_dssp SCCEEEEECCCHHHHHHHHHHHGGGCCEEEECCC--TTHHHHHHHHHHHTCEEEEECC----------------CTHHHH
T ss_pred CCCeEEEeCCCHHHHHHHHhhCCCCCEEEEcCCC--CCChHHHHHHHHhCCeEEEECCCCCCccccccCcccHHHHHHHH
Confidence 48999999999998888766 3 555 2 2333 234578999999999999943 32111 344
Q ss_pred HHHHHHHHHHcCCC-cEEEEeecCCCCCC--CCCccchhHHHHHh-cCCCEEEcCC
Q 027740 75 MVNSAEKVRLAGNP-NVMVCERGTMFGYN--DLIVDPRNLEWMRE-ANCPVVADVT 126 (219)
Q Consensus 75 i~~A~e~i~~~Gn~-~i~L~~cgs~~~~~--~~~~nl~~i~~lk~-~~~pV~~ds~ 126 (219)
+.+.++...+.|.+ +=+++..|.-|+-. .+--=|+.+..+++ +++||.+-.|
T Consensus 346 l~~~i~~a~~aGI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~~~lg~PvLvG~S 401 (442)
T 3mcm_A 346 IEQKKQILLKHGIAQQNIYFDIGFGFGKKSDTARYLLENIIEIKRRLELKALVGHS 401 (442)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCCC------------CCHHHHHHHHTSEEEECCT
T ss_pred HHHHHHHHHHcCCCHHHEEEeCCCCCCCCHHHHHHHHHHHHHHHhhCCCcEEEEec
Confidence 55667778888974 23467888766221 11112477788877 8999887333
No 291
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=78.72 E-value=16 Score=29.46 Aligned_cols=89 Identities=10% Similarity=-0.001 Sum_probs=61.5
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc------cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV------QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~------~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++....+.. .++.+.+. +|.+-+.+.+. .+.++.+.+.+.||++=.....
T Consensus 26 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~l~~~~iPvV~i~~~~~~~~~~~V 103 (276)
T 3jy6_A 26 FKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--PQTVQEILHQQMPVVSVDREMDACPWPQV 103 (276)
T ss_dssp HHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--HHHHHHHHTTSSCEEEESCCCTTCSSCEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--HHHHHHHHHCCCCEEEEecccCCCCCCEE
Confidence 55678899999998877554432 23333333 77766666555 7889999889999876432110
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++-.
T Consensus 104 ~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 131 (276)
T 3jy6_A 104 VTDNFEAAKAATTAFRQQGYQHVVVLTS 131 (276)
T ss_dssp ECCHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred EEChHHHHHHHHHHHHHcCCCeEEEEec
Confidence 2345667888999999999988865
No 292
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=78.43 E-value=25 Score=32.51 Aligned_cols=136 Identities=14% Similarity=0.079 Sum_probs=90.3
Q ss_pred HHHHHHHHHHhcCCCeEee--eCCcccHHHHhhh-ccccccCCCCCCC---HHHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTD--VHETVQCEEVGKV-ADIIQIPAFLCRQ---TDLLVAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt--~~d~~~~~~l~~~-vd~~kI~S~~~~n---~~LL~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
.+..|.+.++..++|++.- +.|+.|+..+..+ +|++-+=...+.. ..|++.+-++|+.+++... |.+|++.
T Consensus 96 s~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh---~~eE~~~ 172 (452)
T 1pii_A 96 SFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVS---NEEEQER 172 (452)
T ss_dssp CTTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHH
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHHH
Confidence 4567888888899999874 4566777776666 7864444444443 4677777789999999987 8999998
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHH
Q 027740 78 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCI 154 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~ 154 (219)
|++ .|.+=|-+-.| ++....+|+.....|.. . +.+|+.-|-=. . +.-
T Consensus 173 A~~----lga~iIGinnr----~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~-----------------t-----~ed 222 (452)
T 1pii_A 173 AIA----LGAKVVGINNR----DLRDLSIDLNRTRELAPKLGHNVTVISESGIN-----------------T-----YAQ 222 (452)
T ss_dssp HHH----TTCSEEEEESE----ETTTTEECTHHHHHHHHHHCTTSEEEEESCCC-----------------C-----HHH
T ss_pred HHH----CCCCEEEEeCC----CCCCCCCCHHHHHHHHHhCCCCCeEEEECCCC-----------------C-----HHH
Confidence 865 35543333333 34445678888888765 3 56665422111 1 344
Q ss_pred HHHHHHcCCcEEEEeeecC
Q 027740 155 ARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 155 ~~aAvalGA~GlvIEkH~t 173 (219)
...+..+ |+|++|=..++
T Consensus 223 v~~~~~~-a~avLVGealm 240 (452)
T 1pii_A 223 VRELSHF-ANGFLIGSALM 240 (452)
T ss_dssp HHHHTTT-CSEEEECHHHH
T ss_pred HHHHHHh-CCEEEEcHHHc
Confidence 5566777 99999877754
No 293
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=78.36 E-value=21 Score=32.99 Aligned_cols=117 Identities=14% Similarity=-0.002 Sum_probs=60.7
Q ss_pred HHHHhhh-ccccccCCCCCC---CHHHHHHHHhc--C-CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCC
Q 027740 29 CEEVGKV-ADIIQIPAFLCR---QTDLLVAAAKT--G-KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGY 101 (219)
Q Consensus 29 ~~~l~~~-vd~~kI~S~~~~---n~~LL~~~a~~--g-kPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~ 101 (219)
++.+.+. ++++.|-..+-. ..+.++.+.+. + .||++.+.. +.++.+.+++ .|..-+.+..-+.+..+
T Consensus 247 ~~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi~G~V~--t~~~a~~l~~----aGad~I~Vg~~~g~~~~ 320 (503)
T 1me8_A 247 VPALVEAGADVLCIDSSDGFSEWQKITIGWIREKYGDKVKVGAGNIV--DGEGFRYLAD----AGADFIKIGIGGGSICI 320 (503)
T ss_dssp HHHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHHGGGSCEEEEEEC--SHHHHHHHHH----HTCSEEEECSSCSTTCC
T ss_pred HHHHHhhhccceEEecccCcccchhhHHHHHHHhCCCCceEeecccc--CHHHHHHHHH----hCCCeEEecccCCcCcc
Confidence 3344444 666665322111 13344444444 5 789987664 4777666543 56654444221111101
Q ss_pred CC-----CCccchhHHHHHh----c------CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEE
Q 027740 102 ND-----LIVDPRNLEWMRE----A------NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGV 166 (219)
Q Consensus 102 ~~-----~~~nl~~i~~lk~----~------~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~Gl 166 (219)
.+ -.-.+.++....+ + ++||+.|. |.+. ..-...|.++||+++
T Consensus 321 ~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~G--------------------Gi~~--~~di~kAlalGA~~V 378 (503)
T 1me8_A 321 TREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDG--------------------GIVY--DYHMTLALAMGADFI 378 (503)
T ss_dssp STTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEES--------------------CCCS--HHHHHHHHHTTCSEE
T ss_pred cccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeC--------------------CCCC--HHHHHHHHHcCCCEE
Confidence 11 0113344444432 3 79998752 2221 233458899999999
Q ss_pred EEeeecC
Q 027740 167 FMEVHDD 173 (219)
Q Consensus 167 vIEkH~t 173 (219)
+|=.-|.
T Consensus 379 ~iG~~~~ 385 (503)
T 1me8_A 379 MLGRYFA 385 (503)
T ss_dssp EESHHHH
T ss_pred EECchhh
Confidence 9988774
No 294
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=77.82 E-value=9.6 Score=31.82 Aligned_cols=139 Identities=10% Similarity=0.049 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHhcCCCeEeee--CCccc-HHHHhhh-ccccccCCCC-CCC-HHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDV--HETVQ-CEEVGKV-ADIIQIPAFL-CRQ-TDLLVAAAKTGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~--~d~~~-~~~l~~~-vd~~kI~S~~-~~n-~~LL~~~a~~gkPVilstG~~~t~~ei~ 76 (219)
-|.+.+++.++..++++-... .||+. ++.+.+. +|++-+-... ..+ ..+++.+-+.|+-+.+.-.+. |+.|..
T Consensus 44 ~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~-tp~~~~ 122 (231)
T 3ctl_A 44 LSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPE-TPVEAM 122 (231)
T ss_dssp BCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTT-CCGGGG
T ss_pred hcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECC-CcHHHH
Confidence 366777777665556555532 34443 5666666 7887766555 333 467888888898888887777 664433
Q ss_pred HHHHHHHHcCCCcEEEEeecCCCCCCCCCc---cchhHHHHHh-c-----CCCEEEcCCCCCCCCCCCccCCCCccCCCC
Q 027740 77 NSAEKVRLAGNPNVMVCERGTMFGYNDLIV---DPRNLEWMRE-A-----NCPVVADVTHSLQQPAGKKLDGGGVASGGL 147 (219)
Q Consensus 77 ~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~---nl~~i~~lk~-~-----~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~ 147 (219)
.. +.. +. +.+++-.+- .++..... -+.-|..+|+ . +++|.+|. |.
T Consensus 123 ~~---~l~-~~-D~VlvmsV~-pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdG--------------------GI 176 (231)
T 3ctl_A 123 KY---YIH-KA-DKITVMTVD-PGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDG--------------------SC 176 (231)
T ss_dssp TT---TGG-GC-SEEEEESSC-TTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEES--------------------CC
T ss_pred HH---HHh-cC-CEEEEeeec-cCcCCccccHHHHHHHHHHHHHHhccCCCceEEEEC--------------------Cc
Confidence 22 222 33 455543221 11211111 2444555554 2 67888762 21
Q ss_pred cccHHHHHHHHHHcCCcEEEEe-ee
Q 027740 148 RELIPCIARTAIAVGVDGVFME-VH 171 (219)
Q Consensus 148 ~~~~~~~~~aAvalGA~GlvIE-kH 171 (219)
. ......++.+|||++++= +-
T Consensus 177 ~---~~~~~~~~~aGAd~~V~G~sa 198 (231)
T 3ctl_A 177 N---QATYEKLMAAGADVFIVGTSG 198 (231)
T ss_dssp S---TTTHHHHHHHTCCEEEECTTT
T ss_pred C---HHHHHHHHHcCCCEEEEccHH
Confidence 1 122446688999988876 44
No 295
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=77.57 E-value=11 Score=31.94 Aligned_cols=89 Identities=6% Similarity=-0.052 Sum_probs=59.2
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Cccc----HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCC----------
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETVQ----CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKG---------- 67 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~~----~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG---------- 67 (219)
+.-+.+.+++.|..++.... +++. ++.+.+. +|.+-+.+.+. +.+.++.+.+.+.||++=..
T Consensus 89 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~-~~~~~~~l~~~~iPvV~i~~~~~~~~~~~V 167 (355)
T 3e3m_A 89 AQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGH-TEQTIRLLQRASIPIVEIWEKPAHPIGHTV 167 (355)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCC-CHHHHHHHHHCCSCEEEESSCCSSCSSEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCC-CHHHHHHHHhCCCCEEEECCccCCCCCCEE
Confidence 55678889999998876443 3221 2223333 77666654433 45778888899999986411
Q ss_pred -CCCCHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 68 -QFCASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 68 -~~~t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
.. ...-...|++++.+.|..+|.++..
T Consensus 168 ~~D-~~~~~~~a~~~L~~~G~r~I~~i~~ 195 (355)
T 3e3m_A 168 GFS-NERAAYDMTNALLARGFRKIVFLGE 195 (355)
T ss_dssp ECC-HHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EeC-hHHHHHHHHHHHHHCCCCeEEEEcc
Confidence 11 2355677889999999999988865
No 296
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=77.36 E-value=7.2 Score=35.30 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV 35 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~ 35 (219)
+.++.+.+..+++++.++=+|+.+++.+-+.++
T Consensus 271 ~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l 303 (427)
T 2pa6_A 271 ELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMI 303 (427)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHH
Confidence 345566667788999999999999888776654
No 297
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=77.07 E-value=17 Score=29.31 Aligned_cols=90 Identities=10% Similarity=0.039 Sum_probs=55.9
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Ccc----cHHHHhhh-ccccccCCCCCCCHHHHHHHHh-cCCeEEEeCCCCC------
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETV----QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAK-TGKIINIKKGQFC------ 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~----~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~-~gkPVilstG~~~------ 70 (219)
+.-+.+++++.|..++.... +++ .++.+.+. +|.+-+.+.+. +.+.++.+.+ .+.||++=.....
T Consensus 40 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~-~~~~~~~l~~~~~iPvV~~~~~~~~~~~~~ 118 (296)
T 3brq_A 40 LFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFL-SVDEIDDIIDAHSQPIMVLNRRLRKNSSHS 118 (296)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECSSS-CHHHHHHHHHTCSSCEEEESCCCSSSGGGE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecCCC-ChHHHHHHHhcCCCCEEEEccccCCCCCCE
Confidence 45677888999988765432 222 12233323 77666554443 3467788888 8999876432110
Q ss_pred ----CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ----ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ----t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 119 V~~d~~~~~~~a~~~l~~~G~~~I~~i~~ 147 (296)
T 3brq_A 119 VWCDHKQTSFNAVAELINAGHQEIAFLTG 147 (296)
T ss_dssp ECCCHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred EEEchHHHHHHHHHHHHHCCCceEEEEcC
Confidence 1233567888999999999988753
No 298
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=77.04 E-value=24 Score=29.95 Aligned_cols=92 Identities=9% Similarity=-0.058 Sum_probs=56.3
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC---CCccc----hhHHHHHh-cCCCEEEcCCCCCC
Q 027740 59 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND---LIVDP----RNLEWMRE-ANCPVVADVTHSLQ 130 (219)
Q Consensus 59 gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~---~~~nl----~~i~~lk~-~~~pV~~ds~Hs~~ 130 (219)
++|++++-+.. +++++..+++.+...|-...+-++.++-. ++. .--|. ..+..+|+ .++||.+=-+-..
T Consensus 93 ~~p~~~~i~g~-~~~~~~~~a~~~~~~g~d~~iein~~~P~-~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~- 169 (311)
T 1jub_A 93 EGPIFFSIAGM-SAAENIAMLKKIQESDFSGITELNLSCPN-VPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYF- 169 (311)
T ss_dssp SSCCEEEECCS-SHHHHHHHHHHHHHSCCCSEEEEESCCCC-SSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCC-
T ss_pred CCCEEEEcCCC-CHHHHHHHHHHHHhcCCCeEEEEeccCCC-CCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCC-
Confidence 79999998766 89999999999998886436666765421 111 00022 33455566 5789876211000
Q ss_pred CCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 131 QPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 131 ~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
. .+-+..++..+...|+||+.+-
T Consensus 170 ---------------~-~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 170 ---------------D-LVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp ---------------S-HHHHHHHHHHHTTSCCCEEEEC
T ss_pred ---------------C-HHHHHHHHHHHHHcCCcEEEec
Confidence 0 1112345777888899976664
No 299
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=77.04 E-value=14 Score=31.02 Aligned_cols=89 Identities=8% Similarity=-0.078 Sum_probs=58.2
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc------cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV------QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~------~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.++++|..++....+.. .++.+.+. +|.+-+.+.+... ++++.+.+.+.||++=.....
T Consensus 81 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~V~ 159 (339)
T 3h5o_A 81 LTGIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE-PFERILSQHALPVVYMMDLADDGRCCVG 159 (339)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT-THHHHHHHTTCCEEEEESCCSSSCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH-HHHHHHhcCCCCEEEEeecCCCCCeEEE
Confidence 55678889999988776443322 12223333 7766665544433 677888888999986422110
Q ss_pred --CHHHHHHHHHHHHHcCCCcEEEEe
Q 027740 71 --ASSVMVNSAEKVRLAGNPNVMVCE 94 (219)
Q Consensus 71 --t~~ei~~A~e~i~~~Gn~~i~L~~ 94 (219)
..+-...+++++.+.|..+|.++.
T Consensus 160 ~D~~~~~~~a~~~L~~~G~~~I~~i~ 185 (339)
T 3h5o_A 160 FSQEDAGAAITRHLLSRGKRRIGFLG 185 (339)
T ss_dssp CCHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ECHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 234567788999999999998885
No 300
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=77.00 E-value=31 Score=32.64 Aligned_cols=137 Identities=9% Similarity=0.066 Sum_probs=83.1
Q ss_pred HHhcCCCeEeeeCCcccHHHHhhh---ccccccCCCCCC-C--HHHHHHHHhcCCeEEEeC--C-CCCC----HHHHHHH
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGKV---ADIIQIPAFLCR-Q--TDLLVAAAKTGKIINIKK--G-QFCA----SSVMVNS 78 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~~---vd~~kI~S~~~~-n--~~LL~~~a~~gkPVilst--G-~~~t----~~ei~~A 78 (219)
.++.++++.-+-++++-++...+. .++ |-|-... . ..++..+++.|.||++.. | +.-| ++.+...
T Consensus 380 ~~~~~vpisIDT~~~~v~eaal~~~~G~~i--INdis~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~ 457 (566)
T 1q7z_A 380 PYVSNVPLSLDIQNVDLTERALRAYPGRSL--FNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKA 457 (566)
T ss_dssp HHHTCSCEEEECCCHHHHHHHHHHCSSCCE--EEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHH
T ss_pred HhhCCceEEEeCCCHHHHHHHHHhcCCCCE--EEECCcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHH
Confidence 345699999999988877775554 333 2221222 2 467888899999999965 3 3323 4556667
Q ss_pred HHHHHHcCCCcEEEEeecC---CCCCCCCCccc---hhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCC--Ccc-
Q 027740 79 AEKVRLAGNPNVMVCERGT---MFGYNDLIVDP---RNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGG--LRE- 149 (219)
Q Consensus 79 ~e~i~~~Gn~~i~L~~cgs---~~~~~~~~~nl---~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G--~~~- 149 (219)
++.+.+.|-++=+++..|. .|+. -|+ +++..+|++++|+.+-.|.- +.+ .++
T Consensus 458 ~~~a~~~Gi~~~IilDPg~~~igfgk----~~~~~l~~~~~~~~~g~p~l~G~Snk---------------sf~~~~~~~ 518 (566)
T 1q7z_A 458 LKILERHDFSDRVIFDPGVLPLGAEG----KPVEVLKTIEFISSKGFNTTVGLSNL---------------SFGLPDRSY 518 (566)
T ss_dssp HHHHHHTTCGGGEEEECCCCCTTTTC----CHHHHHHHHHHHHHTTCEECCBGGGG---------------STTSTTHHH
T ss_pred HHHHHHCCCCCcEEEeCCCCcccCcH----HHHHHHHHHHHHHhCCCCEEEEeCcc---------------cccCCHHHH
Confidence 7778888873334778887 3433 354 45555555688987633221 111 122
Q ss_pred cHHHHHHHHHHcCCcEEEEeee
Q 027740 150 LIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 150 ~~~~~~~aAvalGA~GlvIEkH 171 (219)
+-...+..|+..|++ ++=.|
T Consensus 519 l~~t~a~~a~~~G~~--i~rvh 538 (566)
T 1q7z_A 519 YNTAFLVLGISKGLS--SAIMN 538 (566)
T ss_dssp HHHHHHHHHHHTTCC--EEEEC
T ss_pred HHHHHHHHHHHcCCC--EEEEC
Confidence 223345577889999 55558
No 301
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=76.93 E-value=8.5 Score=34.04 Aligned_cols=29 Identities=10% Similarity=0.092 Sum_probs=12.6
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~ 77 (219)
|.+.++++.+ ++.||+.-=... +.+++..
T Consensus 229 ~~~~~~~l~~~~~iPI~~de~i~-~~~~~~~ 258 (384)
T 2pgw_A 229 SIPAMAHVREKVGIPIVADQAAF-TLYDVYE 258 (384)
T ss_dssp CHHHHHHHHHHCSSCEEESTTCC-SHHHHHH
T ss_pred hHHHHHHHHhhCCCCEEEeCCcC-CHHHHHH
Confidence 3444444432 345555444433 4444443
No 302
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=76.92 E-value=10 Score=30.47 Aligned_cols=90 Identities=7% Similarity=-0.131 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Cccc----HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETVQ----CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~~----~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++.... +++. ++.+.+. +|.+-+.+.+. +.+.++.+.+.+.||++=.....
T Consensus 22 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~-~~~~~~~l~~~~iPvV~~~~~~~~~~~~~V 100 (275)
T 3d8u_A 22 LPSFQQALNKAGYQLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSEH-SQRTHQLLEASNTPVLEIAELSSKASYLNI 100 (275)
T ss_dssp HHHHHHHHHHTSCEECCEECTTCHHHHHHHHHHHHTSCCCCEEEESSCC-CHHHHHHHHHHTCCEEEESSSCSSSSSEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCCCC-CHHHHHHHHhCCCCEEEEeeccCCCCCCEE
Confidence 45677888999987654333 2221 2333333 67665554443 35778888888999876432110
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 101 ~~d~~~~~~~a~~~L~~~G~~~i~~i~~ 128 (275)
T 3d8u_A 101 GVDHFEVGKACTRHLIEQGFKNVGFIGA 128 (275)
T ss_dssp CBCHHHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred EEChHHHHHHHHHHHHHCCCCeEEEEcC
Confidence 1244677889999999999988753
No 303
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=76.72 E-value=23 Score=28.93 Aligned_cols=90 Identities=8% Similarity=-0.072 Sum_probs=59.5
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc------cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV------QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~------~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++....+.. .++.+.+. +|.+-+.+.... .++++.+.+.+.||++=.....
T Consensus 31 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~~~~~~~~~ 109 (295)
T 3hcw_A 31 LLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKEN-DPIKQMLIDESMPFIVIGKPTSDIDHQFT 109 (295)
T ss_dssp HHHHHHHHHTTTCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCTT-CHHHHHHHHTTCCEEEESCCCSSGGGGSC
T ss_pred HHHHHHHHHHCCCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcccC-hHHHHHHHhCCCCEEEECCCCccccCCce
Confidence 45678899999998876444322 12333333 776666554443 3678888889999887433221
Q ss_pred -----CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 -----ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 -----t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...|++++.+.|..+|.++.-
T Consensus 110 ~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~ 139 (295)
T 3hcw_A 110 HIDNDNILASENLTRHVIEQGVDELIFITE 139 (295)
T ss_dssp EEEECHHHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred EEecCcHHHHHHHHHHHHHcCCccEEEEcC
Confidence 1234677889999999999988863
No 304
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=76.62 E-value=37 Score=29.47 Aligned_cols=175 Identities=15% Similarity=0.073 Sum_probs=93.0
Q ss_pred HHHHHhcCCCeEeee-CCcccHHHHhhh------ccccccCC--CC-CCCHHHHHHHHhc-CCeEEEeCCCCCCHHHHHH
Q 027740 9 EKVKIAYDIPIVTDV-HETVQCEEVGKV------ADIIQIPA--FL-CRQTDLLVAAAKT-GKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 9 ~~~~~~~Gi~~~tt~-~d~~~~~~l~~~------vd~~kI~S--~~-~~n~~LL~~~a~~-gkPVilstG~~~t~~ei~~ 77 (219)
.+.+++.|+++...+ .+++.++.+..+ ++++.+.. ++ ..+.+.++++.+. +.|++++-+.. +.++...
T Consensus 87 i~~~~~~g~~v~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~-s~e~A~~ 165 (336)
T 1ypf_A 87 IRDMQSRGLIASISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVG-TPEAVRE 165 (336)
T ss_dssp HHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEEC-SHHHHHH
T ss_pred HHHHHhcCCeEEEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcC-CHHHHHH
Confidence 334455687666543 334444433222 44544421 11 1245677777664 33555553234 7776655
Q ss_pred HHHHHHHcCCCcEEEE-eecCCC--------CCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCC
Q 027740 78 SAEKVRLAGNPNVMVC-ERGTMF--------GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGL 147 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~-~cgs~~--------~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~ 147 (219)
+. +.|..-|++- |.|+.. +.+ ...+..++.+++ .++||+.|..=. .|
T Consensus 166 a~----~aGad~Ivvs~hgG~~~~~~~~~~~g~~--g~~~~~l~~v~~~~~ipVIa~GGI~----------------~g- 222 (336)
T 1ypf_A 166 LE----NAGADATKVGIGPGKVCITKIKTGFGTG--GWQLAALRWCAKAASKPIIADGGIR----------------TN- 222 (336)
T ss_dssp HH----HHTCSEEEECSSCSTTCHHHHHHSCSST--TCHHHHHHHHHHTCSSCEEEESCCC----------------ST-
T ss_pred HH----HcCCCEEEEecCCCceeecccccCcCCc--hhHHHHHHHHHHHcCCcEEEeCCCC----------------CH-
Confidence 53 4687655552 332210 111 014677777777 789998863322 23
Q ss_pred cccHHHHHHHHHHcCCcEEEEeeecCCC-C-----------------CCC-CCCC-------CC---------ChHHHHH
Q 027740 148 RELIPCIARTAIAVGVDGVFMEVHDDPL-N-----------------APV-DGPT-------QW---------PLRNLEE 192 (219)
Q Consensus 148 ~~~~~~~~~aAvalGA~GlvIEkH~t~d-~-----------------a~~-D~~~-------sl---------~p~el~~ 192 (219)
.-...|.++||++++|=+-|--- . .+. .... -. -.+-++.
T Consensus 223 -----~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~~~~~g~~~~~~g~~~~~~~~g~~~~~~~~ 297 (336)
T 1ypf_A 223 -----GDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSASEFQKGEKKNVEGKKMFVEHKGSLEDTLIE 297 (336)
T ss_dssp -----HHHHHHHHTTCSEEEESGGGTTCTTSSSCCC-----------------------CTTSCCSSSSCCCCHHHHHHH
T ss_pred -----HHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccchhhccCccccccceeeecccccHHHHHHH
Confidence 22457788999999998776521 1 110 0000 00 0157788
Q ss_pred HHHHHHHHHHHhCCCccccc
Q 027740 193 LLEELVAIAKVSKGKQRMNI 212 (219)
Q Consensus 193 lv~~ir~i~~~lg~~~~~~~ 212 (219)
++++++..-..+|....-++
T Consensus 298 l~~el~~~m~~~G~~~i~el 317 (336)
T 1ypf_A 298 MEQDLQSSISYAGGTKLDSI 317 (336)
T ss_dssp HHHHHHHHHHHTTSSBGGGG
T ss_pred HHHHHHHHHHHhCcccHHHh
Confidence 88999988888887544333
No 305
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=76.57 E-value=4.3 Score=34.56 Aligned_cols=53 Identities=15% Similarity=0.156 Sum_probs=46.5
Q ss_pred hccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 35 VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 35 ~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
-+|++-|+...-...++..++.+.||+|++.+.++.+++|....++..++.|.
T Consensus 69 ~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~ 121 (315)
T 3c1a_A 69 EVEAVIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGV 121 (315)
T ss_dssp TCCEEEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCC
Confidence 38999999988888999999999999999999999999998888887777664
No 306
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=76.54 E-value=9.8 Score=31.31 Aligned_cols=73 Identities=15% Similarity=0.139 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHH
Q 027740 74 VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 152 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~ 152 (219)
+....++.+.+.|...+.+......... ...|+..+..+++ +++||+++. |.+. .
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~--~~~~~~~i~~i~~~~~ipvi~~G--------------------gi~~--~ 91 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTK--SGYDTEMIRFVRPLTTLPIIASG--------------------GAGK--M 91 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCS--SCCCHHHHHHHGGGCCSCEEEES--------------------CCCS--H
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCC--CcccHHHHHHHHHhCCCCEEEeC--------------------CCCC--H
Confidence 4455666677789887776554322111 2357788888888 899998841 2222 3
Q ss_pred HHHHHHHHcCCcEEEEee
Q 027740 153 CIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 153 ~~~~aAvalGA~GlvIEk 170 (219)
.-+..+.+.||||++|=.
T Consensus 92 ~~~~~~l~~Gad~V~ig~ 109 (247)
T 3tdn_A 92 EHFLEAFLRGADKVSINT 109 (247)
T ss_dssp HHHHHHHHTTCSEECCSH
T ss_pred HHHHHHHHcCCCeeehhh
Confidence 445566788999877654
No 307
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=76.23 E-value=9.4 Score=35.24 Aligned_cols=72 Identities=22% Similarity=0.208 Sum_probs=47.6
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeec-CCCCCC-CCCCCCCChHHHHHHHHH
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD-DPLNAP-VDGPTQWPLRNLEELLEE 196 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~-t~d~a~-~D~~~sl~p~el~~lv~~ 196 (219)
+||++|.|..- |...-+....+..+.+||.|+.||--. .|.|.= -+++.-.+.+|+-.=++.
T Consensus 149 ~PIiaD~DtGf----------------G~~~nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~A 212 (429)
T 1f8m_A 149 APIVADGEAGF----------------GGALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTS 212 (429)
T ss_dssp CCEEEECTTTT----------------SSHHHHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHH
T ss_pred CCEEEECCCCC----------------CCcHHHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHH
Confidence 89999998764 322234455667799999999999775 455431 244555666666666666
Q ss_pred HHHHHHHhCC
Q 027740 197 LVAIAKVSKG 206 (219)
Q Consensus 197 ir~i~~~lg~ 206 (219)
.|.....+|.
T Consensus 213 Ar~A~~~~g~ 222 (429)
T 1f8m_A 213 ARLAADVADV 222 (429)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 6666555554
No 308
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=76.22 E-value=9.2 Score=33.72 Aligned_cols=88 Identities=11% Similarity=-0.026 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhc-CCCeEeeeCCcccHHHHhhh---ccc-cccCCCCCC--CHHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 027740 4 GLKILEKVKIAY-DIPIVTDVHETVQCEEVGKV---ADI-IQIPAFLCR--QTDLLVAAAKTGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 4 gl~~L~~~~~~~-Gi~~~tt~~d~~~~~~l~~~---vd~-~kI~S~~~~--n~~LL~~~a~~gkPVilstG~~~t~~ei~ 76 (219)
.++.+++ .+++ ++.++=+|+.+++.+-++++ .+. +.|...+.. +.++.+. .+.---|++|-...+++.|..
T Consensus 204 a~~~~~~-l~~~~~i~~iEqP~~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~-~~a~d~i~ik~~~~GGit~~~ 281 (372)
T 3cyj_A 204 ALYWAGA-FAREAGISYLEEPVSSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL-AGCVDILQADVTRCGGITGLL 281 (372)
T ss_dssp HHHHHHH-HHHHHCCCEEECSSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH-HTTCSEEEECTTTTTHHHHHT
T ss_pred HHHHHHH-HHhhcCCcEEECCCCcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH-hCCCCEEecCchhhCCHHHHH
Confidence 4455554 5778 99999999999888887776 333 466666553 4554444 444456888888888999999
Q ss_pred HHHHHHHHcCCCcEEEEee
Q 027740 77 NSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 77 ~A~e~i~~~Gn~~i~L~~c 95 (219)
.+++..++.|-+ +.+||
T Consensus 282 ~i~~~A~~~gi~--~~~~~ 298 (372)
T 3cyj_A 282 RVDGICRGHQIP--FSAHC 298 (372)
T ss_dssp THHHHHHHHTCC--EEECS
T ss_pred HHHHHHHHcCCe--ecccc
Confidence 999988888864 45565
No 309
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=76.10 E-value=22 Score=28.99 Aligned_cols=90 Identities=8% Similarity=0.018 Sum_probs=57.3
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--cc----cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TV----QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~----~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+++++.|..++....+ ++ .++.+.+. +|.+-+.+.+. +.+.++.+.+.+.||++=.....
T Consensus 35 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~l~~~~iPvV~~~~~~~~~~~~~V 113 (289)
T 2fep_A 35 ARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNI-TDEHVAEFKRSPVPIVLAASVEEQEETPSV 113 (289)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCC-CHHHHHHHHHSSSCEEEESCCCTTCCSCEE
T ss_pred HHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCC-CHHHHHHHHhcCCCEEEEccccCCCCCCEE
Confidence 456778889999877653332 21 12333333 77666655443 46678888888999876432110
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 114 ~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 141 (289)
T 2fep_A 114 AIDYEQAIYDAVKLLVDKGHTDIAFVSG 141 (289)
T ss_dssp ECCHHHHHHHHHHHHHHTTCSSEEEEES
T ss_pred EECcHHHHHHHHHHHHHCCCCeEEEEeC
Confidence 1245677889999999999988753
No 310
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=76.06 E-value=8.3 Score=30.71 Aligned_cols=84 Identities=17% Similarity=0.124 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCccc----HHHHhhh-ccccccCCC------CCCCHHHHHHHHhc--CCeEEEeCCCC
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQ----CEEVGKV-ADIIQIPAF------LCRQTDLLVAAAKT--GKIINIKKGQF 69 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~----~~~l~~~-vd~~kI~S~------~~~n~~LL~~~a~~--gkPVilstG~~ 69 (219)
+-+..+.++++++|+.++.++..+.+ ++.+.+. +|++.+..+ ...+.+.++++.+. +.||++.-|..
T Consensus 90 ~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~ 169 (211)
T 3f4w_A 90 LTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGIS 169 (211)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCC
T ss_pred hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCC
Confidence 34677888888899888766444433 5555566 777765322 12356777777764 67888877764
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEE
Q 027740 70 CASSVMVNSAEKVRLAGNPNVMV 92 (219)
Q Consensus 70 ~t~~ei~~A~e~i~~~Gn~~i~L 92 (219)
.+.+..+ .+.|..-+++
T Consensus 170 --~~~~~~~----~~~Gad~vvv 186 (211)
T 3f4w_A 170 --SQTVKDY----ALLGPDVVIV 186 (211)
T ss_dssp --TTTHHHH----HTTCCSEEEE
T ss_pred --HHHHHHH----HHcCCCEEEE
Confidence 4544433 3456644433
No 311
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=75.86 E-value=13 Score=30.43 Aligned_cols=90 Identities=10% Similarity=-0.020 Sum_probs=58.7
Q ss_pred HHHHHHHHHhcCCCeEeeeCCc--ccH----HHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHET--VQC----EEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~--~~~----~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++....+. +.. +.+.+. +|.+-+.+.+... +.++.+.+.+.||++=.....
T Consensus 29 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~i~~~~~~~~~~~V 107 (288)
T 3gv0_A 29 VFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPND-PRVRFMTERNMPFVTHGRSDMGIEHAFH 107 (288)
T ss_dssp HHHHHHHHTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTC-HHHHHHHHTTCCEEEESCCCSSCCCEEE
T ss_pred HHHHHHHHHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCCc-HHHHHHhhCCCCEEEECCcCCCCCCcEE
Confidence 4567788999998887654432 221 223223 7766665544333 678888889999887432110
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++-.
T Consensus 108 ~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 135 (288)
T 3gv0_A 108 DFDNEAYAYEAVERLAQCGRKRIAVIVP 135 (288)
T ss_dssp EECHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EeCcHHHHHHHHHHHHHCCCCeEEEEcC
Confidence 2345677889999999999988753
No 312
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=75.80 E-value=4.8 Score=35.46 Aligned_cols=62 Identities=19% Similarity=0.183 Sum_probs=31.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCcc--chhHHHHHh-cCCCEEEcCCCC
Q 027740 67 GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVD--PRNLEWMRE-ANCPVVADVTHS 128 (219)
Q Consensus 67 G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~----~~~n--l~~i~~lk~-~~~pV~~ds~Hs 128 (219)
|.+.+.+.+..-++...+.|-.=|=+.=..|..+.+. +++. +..|..+++ +++||.+|+.+.
T Consensus 27 g~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~~ 95 (314)
T 2vef_A 27 GQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKS 95 (314)
T ss_dssp ---CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCCH
Confidence 3344677777777777788875333333233322221 2233 122334666 789999987663
No 313
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=75.45 E-value=13 Score=32.18 Aligned_cols=75 Identities=17% Similarity=0.136 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCcc--chhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCC
Q 027740 69 FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVD--PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGG 141 (219)
Q Consensus 69 ~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~----~~~n--l~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~ 141 (219)
..+.+++..-++...+.|-.=|=+.=.++..++.. +++. ...+..+++ +++||.+|+.+
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~-------------- 99 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSK-------------- 99 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC--------------
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCC--------------
Confidence 33678888877888888886444444344333221 1221 123444455 68999998665
Q ss_pred ccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 142 VASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 142 ~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+.++++|+..||+ +|.
T Consensus 100 ----------~~va~aAl~aGa~--iIN 115 (282)
T 1aj0_A 100 ----------PEVIRESAKVGAH--IIN 115 (282)
T ss_dssp ----------HHHHHHHHHTTCC--EEE
T ss_pred ----------HHHHHHHHHcCCC--EEE
Confidence 4566677777776 554
No 314
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=75.36 E-value=11 Score=32.78 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=56.5
Q ss_pred HHHHHHHHHhcCCCeEee-e---CCcccHHHHhhh-ccccccCC------------C-----------CCCCHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTD-V---HETVQCEEVGKV-ADIIQIPA------------F-----------LCRQTDLLVAAA 56 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt-~---~d~~~~~~l~~~-vd~~kI~S------------~-----------~~~n~~LL~~~a 56 (219)
++.++++++..++|++.- + ++++.+..+.+. +|++-+.. + -......|.++.
T Consensus 167 ~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~ 246 (349)
T 1p0k_A 167 LKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIR 246 (349)
T ss_dssp HHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHH
Confidence 456777788889998873 2 788888888888 99887741 1 112345566665
Q ss_pred hc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCC
Q 027740 57 KT--GKIINIKKGQFCASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 57 ~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~ 88 (219)
+. +.||+.+-|.. |.+++..++. .|..
T Consensus 247 ~~~~~ipvia~GGI~-~~~d~~k~l~----~GAd 275 (349)
T 1p0k_A 247 SEFPASTMIASGGLQ-DALDVAKAIA----LGAS 275 (349)
T ss_dssp HHCTTSEEEEESSCC-SHHHHHHHHH----TTCS
T ss_pred HhcCCCeEEEECCCC-CHHHHHHHHH----cCCC
Confidence 53 79999999999 9999887754 4654
No 315
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=75.16 E-value=7.1 Score=34.08 Aligned_cols=74 Identities=23% Similarity=0.326 Sum_probs=45.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCC
Q 027740 69 FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGG 141 (219)
Q Consensus 69 ~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~----~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~ 141 (219)
..+.+++..-++...+.|-.=|=+.=..|..+.+. +++. |.++.++. . ++||.+|+.+
T Consensus 42 ~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~-Rv~pvi~~l~~~~vpiSIDT~~-------------- 106 (294)
T 2y5s_A 42 FLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELA-RVIPLVEALRPLNVPLSIDTYK-------------- 106 (294)
T ss_dssp --CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHH-HHHHHHHHHGGGCSCEEEECCC--------------
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHH-HHHHHHHHHhhCCCeEEEECCC--------------
Confidence 44677787777778888875333333333323221 2222 55666655 3 8999999776
Q ss_pred ccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 142 VASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 142 ~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+.++.+|+..||+ +|-
T Consensus 107 ----------~~Va~aAl~aGa~--iIN 122 (294)
T 2y5s_A 107 ----------PAVMRAALAAGAD--LIN 122 (294)
T ss_dssp ----------HHHHHHHHHHTCS--EEE
T ss_pred ----------HHHHHHHHHcCCC--EEE
Confidence 4677888888987 664
No 316
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=75.15 E-value=6.9 Score=33.21 Aligned_cols=154 Identities=10% Similarity=-0.034 Sum_probs=87.2
Q ss_pred HHHHHHHHHhcCCCeEe--eeCCcccHHHHhhh-ccccccCCCCCCC-----HHHHHHHHhc-C-CeEE----Ee---C-
Q 027740 5 LKILEKVKIAYDIPIVT--DVHETVQCEEVGKV-ADIIQIPAFLCRQ-----TDLLVAAAKT-G-KIIN----IK---K- 66 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t--t~~d~~~~~~l~~~-vd~~kI~S~~~~n-----~~LL~~~a~~-g-kPVi----ls---t- 66 (219)
++.+++.+++..+++.- -+.+. +++.+. . ++.+-+||..+.| .++++++.+. + .-|+ .+ .
T Consensus 65 ~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~ 142 (260)
T 2agk_A 65 DDAAREALQESPQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDG 142 (260)
T ss_dssp HHHHHHHHHHSTTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETT
T ss_pred HHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCC
Confidence 56678888877766653 44455 777766 6 8999999999999 9999888763 3 2222 22 1
Q ss_pred C-------CC----CCHH-HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c----CCCEEEcCCCCC
Q 027740 67 G-------QF----CASS-VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A----NCPVVADVTHSL 129 (219)
Q Consensus 67 G-------~~----~t~~-ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~----~~pV~~ds~Hs~ 129 (219)
| -. .++. |+... +.+. ...+ ++|..+.=+.. .-.|+..+..+++ . ++||++...-.
T Consensus 143 g~~V~~~gw~~~t~~~~~~e~a~~---~~~~-a~~i-l~t~i~~dG~~-~G~d~eli~~l~~~~~~~~~iPVIasGGi~- 215 (260)
T 2agk_A 143 RWIVAMNKWQTLTDLELNADTFRE---LRKY-TNEF-LIHAADVEGLC-GGIDELLVSKLFEWTKDYDDLKIVYAGGAK- 215 (260)
T ss_dssp EEEEEETTTTEEEEEEESHHHHHH---HTTT-CSEE-EEEC--------CCCCHHHHHHHHHHHTTCSSCEEEEESCCC-
T ss_pred ceEEEEcCCccccCccHHHHHHHH---HHHh-cCEE-EEEeeccccCc-CCCCHHHHHHHHHhhcccCCceEEEeCCCC-
Confidence 1 11 0122 44443 3344 4444 55665531111 1147888888888 7 99998843222
Q ss_pred CCCCCCccCCCCccCCCCcccHHHHHHHHHHc--CCcEEEEeeecCCCCCCCCCCCC-CChHHHHHHH
Q 027740 130 QQPAGKKLDGGGVASGGLRELIPCIARTAIAV--GVDGVFMEVHDDPLNAPVDGPTQ-WPLRNLEELL 194 (219)
Q Consensus 130 ~~~~~~~~~~~~~~~~G~~~~~~~~~~aAval--GA~GlvIEkH~t~d~a~~D~~~s-l~p~el~~lv 194 (219)
. ..-......+ |++|+++=+-++ =|.-. ++++++.+..
T Consensus 216 -------------------s--~ed~~~l~~~~~G~~gvivg~al~------l~~g~~~~~~~~~~~~ 256 (260)
T 2agk_A 216 -------------------S--VDDLKLVDELSHGKVDLTFGSSLD------IFGGNLVKFEDCCRWN 256 (260)
T ss_dssp -------------------C--THHHHHHHHHHTTCEEEECCTTBG------GGTCSSBCHHHHHHHH
T ss_pred -------------------C--HHHHHHHHHhcCCCCEEEeeCCHH------HcCCCCCCHHHHHHHH
Confidence 1 1222344444 999988866421 02234 5666666554
No 317
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=75.13 E-value=32 Score=28.02 Aligned_cols=90 Identities=10% Similarity=-0.123 Sum_probs=59.7
Q ss_pred HHHHHHHHHhcCCCeEeeeCC----c----ccHHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCCeEEEeCCCCC----
Q 027740 5 LKILEKVKIAYDIPIVTDVHE----T----VQCEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQFC---- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d----~----~~~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gkPVilstG~~~---- 70 (219)
+.-+.++++++|..+.....+ + ..++.+.+. +|.+-+.+.+.. ..+.++.+.+.|.||++=.....
T Consensus 22 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~ 101 (297)
T 3rot_A 22 FQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTK 101 (297)
T ss_dssp HHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCCSCTTT
T ss_pred HHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCCccccc
Confidence 456788899999988764432 1 123333333 787777665544 36788888899999987432221
Q ss_pred ----------CHHHHHHHHHHHHHcC--CCcEEEEe
Q 027740 71 ----------ASSVMVNSAEKVRLAG--NPNVMVCE 94 (219)
Q Consensus 71 ----------t~~ei~~A~e~i~~~G--n~~i~L~~ 94 (219)
..+-...+++++.+.| ..++.++.
T Consensus 102 ~~~~~~V~~D~~~~g~~a~~~l~~~g~~~~~i~~i~ 137 (297)
T 3rot_A 102 NPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLN 137 (297)
T ss_dssp SCCSCEEECCHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred cCcceEEccChHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 1334567888999999 77887774
No 318
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=75.01 E-value=40 Score=28.98 Aligned_cols=142 Identities=15% Similarity=0.127 Sum_probs=84.1
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCC------------CCCHHH---HHHHHh-cCC-eEEEeC
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFL------------CRQTDL---LVAAAK-TGK-IINIKK 66 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~------------~~n~~L---L~~~a~-~gk-PVilst 66 (219)
+..|++..++-...++-++||..+...+++. +|++.+|+.. ++-.++ .+++++ ++. ||+.-+
T Consensus 6 ~~~lr~~k~~g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~ 85 (264)
T 1m3u_A 6 ISLLQKYKQEKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADL 85 (264)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 3456666666667788899999999999999 9999998531 111233 344444 343 677777
Q ss_pred CCCC--CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEE-----------cCCCCCCCCC
Q 027740 67 GQFC--ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVA-----------DVTHSLQQPA 133 (219)
Q Consensus 67 G~~~--t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~-----------ds~Hs~~~~~ 133 (219)
+... ++++....+..+...|.. -+=+|-+.. -...|..+.+.++||+. +.+.-+|
T Consensus 86 pfgsy~~~~~a~~~a~rl~kaGa~-aVklEgg~e--------~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~--- 153 (264)
T 1m3u_A 86 PFMAYATPEQAFENAATVMRAGAN-MVKIEGGEW--------LVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQ--- 153 (264)
T ss_dssp CTTSSSSHHHHHHHHHHHHHTTCS-EEECCCSGG--------GHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCC---
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCC-EEEECCcHH--------HHHHHHHHHHCCCCeEeeecCCceeecccCCeEEE---
Confidence 7641 344444433344446753 444554321 12345555556889862 1122221
Q ss_pred CCccCCCCccCCCCc----ccHHHHHHHHHHcCCcEEEEee
Q 027740 134 GKKLDGGGVASGGLR----ELIPCIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 134 ~~~~~~~~~~~~G~~----~~~~~~~~aAvalGA~GlvIEk 170 (219)
|+. +-+..-+++-..+||+++|+|.
T Consensus 154 ------------grt~~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (264)
T 1m3u_A 154 ------------GRGDEAGDQLLSDALALEAAGAQLLVLEC 182 (264)
T ss_dssp ------------CCSHHHHHHHHHHHHHHHHHTCCEEEEES
T ss_pred ------------eCCHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence 221 1233345677889999999997
No 319
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=74.81 E-value=32 Score=27.87 Aligned_cols=90 Identities=7% Similarity=-0.087 Sum_probs=57.9
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Ccc-c---HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETV-Q---CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~-~---~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+++++.|..++.... ++. + ++.+.+. +|.+-+.+.+... +.++.+.+.+.||++=.....
T Consensus 27 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~~V 105 (287)
T 3bbl_A 27 LSSMVREAGAVNYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYND-PRVQFLLKQKFPFVAFGRSNPDWDFAWV 105 (287)
T ss_dssp HHHHHHHHHHTTCEEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCTTC-HHHHHHHHTTCCEEEESCCSTTCCCCEE
T ss_pred HHHHHHHHHHcCCEEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCCCc-HHHHHHHhcCCCEEEECCcCCCCCCCEE
Confidence 45677888999987765332 222 2 3333333 7777666555444 678888888999876432210
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 106 ~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 133 (287)
T 3bbl_A 106 DIDGTAGTRQAVEYLIGRGHRRIAILAW 133 (287)
T ss_dssp EECHHHHHHHHHHHHHHHTCCCEEEEEC
T ss_pred EeccHHHHHHHHHHHHHCCCCeEEEEeC
Confidence 1244567888999999999988753
No 320
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=74.64 E-value=42 Score=29.10 Aligned_cols=153 Identities=13% Similarity=0.078 Sum_probs=86.9
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCC------------CC---CHHHHHHHHh-cCC-eEEEeC
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFL------------CR---QTDLLVAAAK-TGK-IINIKK 66 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~------------~~---n~~LL~~~a~-~gk-PVilst 66 (219)
+..|++..++-...++-++||..+...+++. +|++-+|+.. ++ -....+.+++ +.. +|+.-+
T Consensus 23 ~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~ 102 (281)
T 1oy0_A 23 THHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADL 102 (281)
T ss_dssp HHHHHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 3456666666667788899999999999999 9999888531 11 2345666665 343 466777
Q ss_pred CCCC---CHHHH-HHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCc
Q 027740 67 GQFC---ASSVM-VNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGV 142 (219)
Q Consensus 67 G~~~---t~~ei-~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~ 142 (219)
|... ++++. .+|++.+++.|.. -+=+|-+.. -...|..+.+.++||+.----+.|+.+. .++=+
T Consensus 103 pfgsy~~s~~~a~~na~rl~~eaGa~-aVklEdg~e--------~~~~I~al~~agIpV~gHiGLtPqsv~~---~ggf~ 170 (281)
T 1oy0_A 103 PFGSYEAGPTAALAAATRFLKDGGAH-AVKLEGGER--------VAEQIACLTAAGIPVMAHIGFTPQSVNT---LGGFR 170 (281)
T ss_dssp CTTSSTTCHHHHHHHHHHHHHTTCCS-EEEEEBSGG--------GHHHHHHHHHHTCCEEEEEECCC-------------
T ss_pred CCCcccCCHHHHHHHHHHHHHHhCCe-EEEECCcHH--------HHHHHHHHHHCCCCEEeeecCCcceecc---cCCeE
Confidence 7642 46664 4466666667764 555665421 1244555555688986200001111000 00000
Q ss_pred cCCCCc---ccHHHHHHHHHHcCCcEEEEee
Q 027740 143 ASGGLR---ELIPCIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 143 ~~~G~~---~~~~~~~~aAvalGA~GlvIEk 170 (219)
. -|+. +-+..-+++-..+||+++|+|.
T Consensus 171 v-~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 200 (281)
T 1oy0_A 171 V-QGRGDAAEQTIADAIAVAEAGAFAVVMEM 200 (281)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCSEEEEES
T ss_pred E-EeCcHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 0 1111 2233345677889999999997
No 321
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=74.55 E-value=7.8 Score=33.60 Aligned_cols=76 Identities=18% Similarity=0.231 Sum_probs=46.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCccchhHHHHHh---cCCCEEEcCCCCCCCCCCCccCC
Q 027740 67 GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVDPRNLEWMRE---ANCPVVADVTHSLQQPAGKKLDG 139 (219)
Q Consensus 67 G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~----~~~nl~~i~~lk~---~~~pV~~ds~Hs~~~~~~~~~~~ 139 (219)
|...+.++...-++.+.+.|..=|=+--+.|..+++. ++++ |.+|.++. +++||-+|..+
T Consensus 24 G~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~-Rv~pvi~~l~~~~v~iSIDT~~------------ 90 (270)
T 4hb7_A 24 GKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELN-RVLPVVEAIVGFDVKISVDTFR------------ 90 (270)
T ss_dssp ---CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHH-HHHHHHHHHTTSSSEEEEECSC------------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHH-HHHHHHHHhhcCCCeEEEECCC------------
Confidence 4444667777777777888986444433333433332 2233 55666554 67888888554
Q ss_pred CCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 140 GGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 140 ~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+.++++|+.+||+ +|.
T Consensus 91 ------------~~Va~~al~aGa~--iIN 106 (270)
T 4hb7_A 91 ------------SEVAEACLKLGVD--MIN 106 (270)
T ss_dssp ------------HHHHHHHHHHTCC--EEE
T ss_pred ------------HHHHHHHHHhccc--eec
Confidence 5678889999998 776
No 322
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=74.55 E-value=32 Score=29.13 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=86.6
Q ss_pred HHHHHHHHHHhcCCCeEee--eCCcccHHHHhhh-cccc-ccCCCCCCC---HHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTD--VHETVQCEEVGKV-ADII-QIPAFLCRQ---TDLLVAAAKTGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt--~~d~~~~~~l~~~-vd~~-kI~S~~~~n---~~LL~~~a~~gkPVilstG~~~t~~ei~ 76 (219)
++..|.+.++..++|++.- +.++.++..+... +|++ -|++ .+.. ..|++.+-+.|+-+++... +.+|+.
T Consensus 89 s~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a-~l~~~~l~~l~~~a~~lGl~~lvEv~---~~eE~~ 164 (251)
T 1i4n_A 89 DPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIAR-ILTAEQIKEIYEAAEELGMDSLVEVH---SREDLE 164 (251)
T ss_dssp CTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGG-GSCHHHHHHHHHHHHTTTCEEEEEEC---SHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecc-cCCHHHHHHHHHHHHHcCCeEEEEeC---CHHHHH
Confidence 4677888888889999874 4577777777677 7764 4444 3332 4667777778999999987 899988
Q ss_pred HHHHHHHHc-CCCcEEEEeecCCCCCCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHH
Q 027740 77 NSAEKVRLA-GNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 152 (219)
Q Consensus 77 ~A~e~i~~~-Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~ 152 (219)
.|++ . |. +++-++- . ++....+|+.....|.. . +.+|+.- + |... +
T Consensus 165 ~A~~----l~g~-~iIGinn-r--~l~t~~~d~~~~~~l~~~ip~~~~vIaE-s-------------------GI~t--~ 214 (251)
T 1i4n_A 165 KVFS----VIRP-KIIGINT-R--DLDTFEIKKNVLWELLPLVPDDTVVVAE-S-------------------GIKD--P 214 (251)
T ss_dssp HHHT----TCCC-SEEEEEC-B--CTTTCCBCTTHHHHHGGGSCTTSEEEEE-S-------------------CCCC--G
T ss_pred HHHh----cCCC-CEEEEeC-c--ccccCCCCHHHHHHHHHhCCCCCEEEEe-C-------------------CCCC--H
Confidence 7754 3 54 4554443 1 23344578877777755 3 4555431 1 1110 2
Q ss_pred HHHHHHHHcCCcEEEEeeecC
Q 027740 153 CIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 153 ~~~~aAvalGA~GlvIEkH~t 173 (219)
.-...+..+ |+|++|=..++
T Consensus 215 edv~~~~~~-a~avLVG~aim 234 (251)
T 1i4n_A 215 RELKDLRGK-VNAVLVGTSIM 234 (251)
T ss_dssp GGHHHHTTT-CSEEEECHHHH
T ss_pred HHHHHHHHh-CCEEEEcHHHc
Confidence 224456677 99988866543
No 323
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=74.49 E-value=15 Score=32.58 Aligned_cols=76 Identities=8% Similarity=-0.035 Sum_probs=32.7
Q ss_pred HHhcCCCeEeeeCCcccHHHHhhhcc--ccccCCC-CCCCHHHHHHHHhcC------CeEEEeCCCCCCHHHHHHHHHHH
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGKVAD--IIQIPAF-LCRQTDLLVAAAKTG------KIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~~vd--~~kI~S~-~~~n~~LL~~~a~~g------kPVilstG~~~t~~ei~~A~e~i 82 (219)
.+++|+.++-+|+.+.+.+.+.++-. -+.|... .+++..-++.+-+.+ --|++|-...+.+.+....++..
T Consensus 233 l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~~~i~~~A 312 (392)
T 1tzz_A 233 LRDYPLFWYEEVGDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEVL 312 (392)
T ss_dssp HTTSCCSEEECCSCTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHHHH
T ss_pred HHHcCCCeecCCCChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHHHHHHHHHHH
Confidence 34556666655555555554444311 1222222 223333333333322 23444444444555555555555
Q ss_pred HHcCC
Q 027740 83 RLAGN 87 (219)
Q Consensus 83 ~~~Gn 87 (219)
++.|-
T Consensus 313 ~~~gi 317 (392)
T 1tzz_A 313 KTHGW 317 (392)
T ss_dssp HHTTC
T ss_pred HHCCC
Confidence 54443
No 324
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=74.24 E-value=35 Score=28.20 Aligned_cols=121 Identities=11% Similarity=0.053 Sum_probs=76.3
Q ss_pred HHHHhcCCCeEeeeCCcccHHHH----hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 10 KVKIAYDIPIVTDVHETVQCEEV----GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 10 ~~~~~~Gi~~~tt~~d~~~~~~l----~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
+..++.++..+....+.++.-.+ .+. ++++++.-.+..-.++++++++.-..+.+--|.-.+.++++.|++
T Consensus 21 ~~l~~~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~---- 96 (225)
T 1mxs_A 21 AICEKARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEA---- 96 (225)
T ss_dssp HHHHHHSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHH----
T ss_pred HHHHHCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHH----
Confidence 34466787777777777654333 334 889999876655577788776654456666666667788777754
Q ss_pred cCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 85 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 85 ~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
.|-.-+ |.+ ..|+..+...+..+.+++. .-|+ +.-+..|..+|||
T Consensus 97 aGAd~v---~~p--------~~d~~v~~~~~~~g~~~i~-G~~t-----------------------~~e~~~A~~~Gad 141 (225)
T 1mxs_A 97 AGAQFV---VTP--------GITEDILEAGVDSEIPLLP-GIST-----------------------PSEIMMGYALGYR 141 (225)
T ss_dssp HTCSSE---ECS--------SCCHHHHHHHHHCSSCEEC-EECS-----------------------HHHHHHHHTTTCC
T ss_pred CCCCEE---EeC--------CCCHHHHHHHHHhCCCEEE-eeCC-----------------------HHHHHHHHHCCCC
Confidence 465544 322 1365555555557877654 2444 3445788999999
Q ss_pred EEEEeee
Q 027740 165 GVFMEVH 171 (219)
Q Consensus 165 GlvIEkH 171 (219)
.|=.|
T Consensus 142 --~vk~F 146 (225)
T 1mxs_A 142 --RFKLF 146 (225)
T ss_dssp --EEEET
T ss_pred --EEEEc
Confidence 44444
No 325
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=74.24 E-value=12 Score=34.61 Aligned_cols=72 Identities=22% Similarity=0.199 Sum_probs=48.2
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC-CCCCC-CCCCCCCChHHHHHHHHH
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD-PLNAP-VDGPTQWPLRNLEELLEE 196 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t-~d~a~-~D~~~sl~p~el~~lv~~ 196 (219)
+||++|.+..- |...-+....+..+.+||.|+-||--.. |.|-- -+++.-.+.+|+-.-++.
T Consensus 153 ~PviaD~dtGf----------------G~~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~A 216 (439)
T 3i4e_A 153 APIVADAEAGF----------------GGVLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTA 216 (439)
T ss_dssp CCEEEECTTTT----------------SSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHH
T ss_pred CCeEEECCCCC----------------CccHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHH
Confidence 99999998764 3222244556677999999999997653 44432 245556677777666666
Q ss_pred HHHHHHHhCC
Q 027740 197 LVAIAKVSKG 206 (219)
Q Consensus 197 ir~i~~~lg~ 206 (219)
+|.....+|.
T Consensus 217 ar~A~~~~g~ 226 (439)
T 3i4e_A 217 ARLAADVMGT 226 (439)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhcCC
Confidence 6666655664
No 326
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=74.21 E-value=31 Score=29.17 Aligned_cols=148 Identities=15% Similarity=0.171 Sum_probs=84.9
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCC-CHHH-----HHHHHhcCC------eEE----EeCCC
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCR-QTDL-----LVAAAKTGK------IIN----IKKGQ 68 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~-n~~L-----L~~~a~~gk------PVi----lstG~ 68 (219)
++.+++.++ +.+|++-.|.+++++ .+.+|.+-+++=.-. |..+ ++++.+.|. +|. +=.+.
T Consensus 54 ~~~v~~ik~-~~~Piil~p~~~~~~---~~gaD~il~pslln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~ 129 (235)
T 3w01_A 54 IHLMSKIRR-YPLPLVLEISNIESV---MPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNAD 129 (235)
T ss_dssp HHHHHHHTT-SCSCEEEECCCSTTC---CTTCSEEEEEEETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSS
T ss_pred HHHHHHhcC-cCCCEEEecCCHHHh---hcCCCEEEEccccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEEECCC
Confidence 455555555 999999999998665 445888777764332 4444 456777774 333 23333
Q ss_pred CCCHHH---------HHHHHHHHH----HcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCC
Q 027740 69 FCASSV---------MVNSAEKVR----LAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPA 133 (219)
Q Consensus 69 ~~t~~e---------i~~A~e~i~----~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~ 133 (219)
+ +.+. .+.++.+-+ -.|- .++-++. + +.+ .|...+..+|+ + ++||.+-
T Consensus 130 s-~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~-~~vY~e~-s--G~~---g~~~~v~~ir~~~~~~pv~vG--------- 192 (235)
T 3w01_A 130 S-KVAKHTKANTDLTTEDLEAYAQMVNHMYRL-PVMYIEY-S--GIY---GDVSKVQAVSEHLTETQLFYG--------- 192 (235)
T ss_dssp S-HHHHHTTBCCCCCHHHHHHHHHHHHHTTCC-SEEEEEC-T--TSC---CCHHHHHHHHTTCSSSEEEEE---------
T ss_pred C-ChhhcccCCcCCCHHHHHHHHHHHHHHcCC-CEEEEec-C--CCc---CCHHHHHHHHHhcCCCCEEEE---------
Confidence 3 3332 455555433 1233 3444554 3 222 36788888888 7 8898771
Q ss_pred CCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHH
Q 027740 134 GKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELV 198 (219)
Q Consensus 134 ~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir 198 (219)
+|.+. +..+..+.. ||||+++=+-+.- +|+.++++++.++
T Consensus 193 -----------fGI~~--~e~a~~~~~-gAD~VVVGSai~~-----------~~~~~~e~v~~v~ 232 (235)
T 3w01_A 193 -----------GGISS--EQQATEMAA-IADTIIVGDIIYK-----------DIKKALKTVKIKE 232 (235)
T ss_dssp -----------SCCCS--HHHHHHHHT-TSSEEEECTHHHH-----------CHHHHHHTTCC--
T ss_pred -----------CCcCC--HHHHHHHHc-CCCEEEECCceec-----------CHHHHHHHHHHHh
Confidence 23332 444544444 9999998665332 3666666655443
No 327
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=74.17 E-value=7.5 Score=31.97 Aligned_cols=64 Identities=17% Similarity=0.075 Sum_probs=40.8
Q ss_pred HHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEc
Q 027740 51 LLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 124 (219)
Q Consensus 51 LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~d 124 (219)
.++.+.++|+||++-++..-... ..++.+++.|.+ .++++||+.+ .++..+..+.+.++.|.++
T Consensus 143 ~~~~a~~~~~pv~iH~~~~~~~~---~~~~~l~~~~~~~~~~~i~H~~~~-------~~~~~~~~~~~~G~~i~~~ 208 (291)
T 1bf6_A 143 AALAHNQTGRPISTHTSFSTMGL---EQLALLQAHGVDLSRVTVGHCDLK-------DNLDNILKMIDLGAYVQFD 208 (291)
T ss_dssp HHHHHHHHCCCEEEECGGGCSHH---HHHHHHHHTTCCGGGEEECCCCSS-------CCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHCCeEEEeCCCCCChH---HHHHHHHHcCCCchhEEEECCCCC-------CCHHHHHHHHHCCCEEEEc
Confidence 55566778999999886321112 345666666754 7899999643 1344555555567888875
No 328
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=73.89 E-value=6 Score=35.41 Aligned_cols=65 Identities=11% Similarity=0.000 Sum_probs=39.7
Q ss_pred HHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEc
Q 027740 51 LLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 124 (219)
Q Consensus 51 LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~d 124 (219)
-++.+.++|+||++-++.+ .-.. ..++.+++.|.+ .+++|||+++ . +.+ -+...+++.|+-|+||
T Consensus 174 q~~~A~e~glPViiH~r~g-r~a~--d~l~iL~e~g~~~~~vvi~H~~~~---~--~~~-~a~~~l~~~G~yI~f~ 240 (363)
T 3ovg_A 174 AARTSILTGCPILVHTQLG-TMAL--EVAKHLIGFGANPDKIQISHLNKN---P--DKY-YYEKVIKETGVTLCFD 240 (363)
T ss_dssp HHHHHHHHCCCEEEEEETT-CSHH--HHHHHHHHHTCCGGGEEEECGGGS---C--CHH-HHHHHHHHHCCEEEEC
T ss_pred HHHHHHHhCCEEEEeCCCC-CCHH--HHHHHHHhcCCCCCcEEEEcCCCC---C--CHH-HHHHHHHHCCcEEEEC
Confidence 3455667899999999854 2111 345677776654 6899999864 1 112 1233332357778885
No 329
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=73.77 E-value=28 Score=31.00 Aligned_cols=97 Identities=15% Similarity=0.054 Sum_probs=59.4
Q ss_pred HHHHHHh-cCC-eEEEeCCCC---------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cC
Q 027740 51 LLVAAAK-TGK-IINIKKGQF---------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN 118 (219)
Q Consensus 51 LL~~~a~-~gk-PVilstG~~---------~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~ 118 (219)
.++++-+ .|. ||.++-... .+.++....++.+...|..-|.+..+...-.++. .++..+..+|+ ++
T Consensus 222 iv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~--~~~~~~~~ik~~~~ 299 (377)
T 2r14_A 222 VVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT--YPEGFREQMRQRFK 299 (377)
T ss_dssp HHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C--CCTTHHHHHHHHCC
T ss_pred HHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc--chHHHHHHHHHHCC
Confidence 3444443 342 999985321 2578888888888888876555543321101111 15666778888 89
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeeec
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 172 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH~ 172 (219)
+||+... |. . ...+..+++.| ||++++=+-+
T Consensus 300 iPvi~~G--------------------gi-~--~~~a~~~l~~g~aD~V~igR~~ 331 (377)
T 2r14_A 300 GGLIYCG--------------------NY-D--AGRAQARLDDNTADAVAFGRPF 331 (377)
T ss_dssp SEEEEES--------------------SC-C--HHHHHHHHHTTSCSEEEESHHH
T ss_pred CCEEEEC--------------------CC-C--HHHHHHHHHCCCceEEeecHHH
Confidence 9998742 22 1 45677788888 9988876653
No 330
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=73.47 E-value=32 Score=28.18 Aligned_cols=90 Identities=8% Similarity=-0.054 Sum_probs=59.8
Q ss_pred HHHHHHHHHhcCCCeEeeeCCccc------HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQ------CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~------~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.++++|..++....+... ++.+.+. +|.+-+.+.+... +.++.+.+.+.||++=.....
T Consensus 46 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~l~~~~iPvV~i~~~~~~~~~~~V 124 (305)
T 3huu_A 46 LNGINQACNVRGYSTRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDD-PIEHLLNEFKVPYLIVGKSLNYENIIHI 124 (305)
T ss_dssp HHHHHHHHHHHTCEEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTC-HHHHHHHHTTCCEEEESCCCSSTTCCEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCc-HHHHHHHHcCCCEEEECCCCcccCCcEE
Confidence 456778889999887764443321 2233333 7776666555444 778888889999887433210
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
...-...|++++.+.|..+|.++..
T Consensus 125 ~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 152 (305)
T 3huu_A 125 DNDNIDAAYQLTQYLYHLGHRHILFLQE 152 (305)
T ss_dssp ECCHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EeCHHHHHHHHHHHHHHCCCCeEEEEcC
Confidence 1345677889999999999988864
No 331
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=73.46 E-value=18 Score=29.98 Aligned_cols=27 Identities=7% Similarity=0.059 Sum_probs=20.6
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCCcEEE
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNPNVMV 92 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~~i~L 92 (219)
-+|-. +.+++...++.+.+.|..-|.|
T Consensus 25 ~~g~~-~~~~~~~~~~~l~~~Gad~iel 51 (262)
T 1rd5_A 25 TAGDP-DLATTAEALRLLDGCGADVIEL 51 (262)
T ss_dssp ETTSS-CHHHHHHHHHHHHHTTCSSEEE
T ss_pred eCCCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence 35655 7799999999999889775544
No 332
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=73.10 E-value=43 Score=34.44 Aligned_cols=109 Identities=13% Similarity=0.117 Sum_probs=70.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcc
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRE 149 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~ 149 (219)
+++.+...++.+.+.|...|.|+.-... ..|. .+ ..-+..+|+ +++||.+ +.|-. .|.
T Consensus 690 ~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~-~~P~-~~-~~lv~~l~~~~~~~i~~-H~Hnt---------------~G~-- 748 (1150)
T 3hbl_A 690 TLEYYVKLAKELEREGFHILAIKDMAGL-LKPK-AA-YELIGELKSAVDLPIHL-HTHDT---------------SGN-- 748 (1150)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEETTCC-CCHH-HH-HHHHHHHHHHCCSCEEE-EECBT---------------TSC--
T ss_pred CHHHHHHHHHHHHHcCCCeeeEcCccCC-CCHH-HH-HHHHHHHHHhcCCeEEE-EeCCC---------------CcH--
Confidence 6888999999999999988888775443 1221 12 244566777 8999999 88873 242
Q ss_pred cHHHHHHHHHHcCCcEEEEeeecCCCC------C-------C--CCCCCCCChHHHHHHHHHHHHHHHH
Q 027740 150 LIPCIARTAIAVGVDGVFMEVHDDPLN------A-------P--VDGPTQWPLRNLEELLEELVAIAKV 203 (219)
Q Consensus 150 ~~~~~~~aAvalGA~GlvIEkH~t~d~------a-------~--~D~~~sl~p~el~~lv~~ir~i~~~ 203 (219)
-...+++|+.+||+ .|+.-...=- + + .....-++++.|.++-+-++++...
T Consensus 749 -a~An~laA~~aGa~--~vD~ai~GlG~~~gn~~lE~lv~~L~~~g~~tgidl~~l~~~~~~~~~~~~~ 814 (1150)
T 3hbl_A 749 -GLLTYKQAIDAGVD--IIDTAVASMSGLTSQPSANSLYYALNGFPRHLRTDIEGMESLSHYWSTVRTY 814 (1150)
T ss_dssp -HHHHHHHHHHTTCS--EEEEBCGGGCSBTSCCBHHHHHHHTTTSSCCBCSCHHHHHHHHHHHHHHHGG
T ss_pred -HHHHHHHHHHhCCC--EEEEeccccCCCCCCccHHHHHHHHHhcCCCcCccHHHHHHHHHHHHHHHhh
Confidence 25567899999999 8876443211 0 1 1233456666666665555555443
No 333
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=72.95 E-value=24 Score=30.82 Aligned_cols=82 Identities=17% Similarity=0.108 Sum_probs=47.5
Q ss_pred HHhcCCCeEeeeCCcccHHHHhhhcc--ccccCCC-CCCCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGKVAD--IIQIPAF-LCRQTDLLVAAAKTG--KIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~~vd--~~kI~S~-~~~n~~LL~~~a~~g--kPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
.+++|+.++-+|+.+.+.+.++++-. -+.|... .+++..-++.+-+.+ --|++|-...+.+.+....++..++.|
T Consensus 205 l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 284 (368)
T 1sjd_A 205 LDPFGLLLIEQPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHG 284 (368)
T ss_dssp TGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTT
T ss_pred HHhcCCCeEeCCCChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcC
Confidence 46677777777777766666655422 1233333 344554455544443 356667776667777777777777666
Q ss_pred CCcEEEEe
Q 027740 87 NPNVMVCE 94 (219)
Q Consensus 87 n~~i~L~~ 94 (219)
-+ +++-|
T Consensus 285 ~~-~~~~~ 291 (368)
T 1sjd_A 285 IP-VWCGG 291 (368)
T ss_dssp CC-EEECC
T ss_pred Cc-EEeCC
Confidence 53 33444
No 334
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=72.90 E-value=13 Score=32.34 Aligned_cols=80 Identities=16% Similarity=0.060 Sum_probs=58.2
Q ss_pred HHHHHHHHhc---CCCeE-eeeCCcccHHHHhhh-ccccc-----cCCC-CCCCHHHHHHHHh-c-C-CeEEEeCCCCCC
Q 027740 6 KILEKVKIAY---DIPIV-TDVHETVQCEEVGKV-ADIIQ-----IPAF-LCRQTDLLVAAAK-T-G-KIINIKKGQFCA 71 (219)
Q Consensus 6 ~~L~~~~~~~---Gi~~~-tt~~d~~~~~~l~~~-vd~~k-----I~S~-~~~n~~LL~~~a~-~-g-kPVilstG~~~t 71 (219)
..+-+.|+++ |+.++ -..-|+..+..++++ ++++- |||+ -++|.++|+.+.+ . + .|||.--|.+ |
T Consensus 111 ~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~-t 189 (268)
T 2htm_A 111 LETLKAAERLIEEDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVVDAGLG-L 189 (268)
T ss_dssp HHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEEESCCC-S
T ss_pred HHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEEeCCCC-C
Confidence 3455666666 98877 355677777788877 55542 5665 4668899999987 4 5 7999999999 9
Q ss_pred HHHHHHHHHHHHHcCCCcE
Q 027740 72 SSVMVNSAEKVRLAGNPNV 90 (219)
Q Consensus 72 ~~ei~~A~e~i~~~Gn~~i 90 (219)
++++..|.+ -|..-+
T Consensus 190 psDAa~Ame----LGAdgV 204 (268)
T 2htm_A 190 PSHAAEVME----LGLDAV 204 (268)
T ss_dssp HHHHHHHHH----TTCCEE
T ss_pred HHHHHHHHH----cCCCEE
Confidence 999988765 576544
No 335
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=72.78 E-value=10 Score=30.99 Aligned_cols=74 Identities=18% Similarity=0.149 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHH
Q 027740 74 VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 152 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~ 152 (219)
+....++.+.+.|..-+.+......+ . ....++..+..+++ +++||++. . |.+. .
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~-~-~~~~~~~~i~~i~~~~~iPvi~~-G-------------------gi~~--~ 87 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATH-E-ERAILLDVVARVAERVFIPLTVG-G-------------------GVRS--L 87 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSST-T-CHHHHHHHHHHHHTTCCSCEEEE-S-------------------SCCS--H
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccc-c-CccccHHHHHHHHHhCCCCEEEE-C-------------------CcCC--H
Confidence 45555666677888877777654322 1 11235666777777 79999883 2 2211 3
Q ss_pred HHHHHHHHcCCcEEEEeee
Q 027740 153 CIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 153 ~~~~aAvalGA~GlvIEkH 171 (219)
.-+..+.+.||||+++=.-
T Consensus 88 ~~~~~~~~~Gad~V~lg~~ 106 (252)
T 1ka9_F 88 EDARKLLLSGADKVSVNSA 106 (252)
T ss_dssp HHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEChH
Confidence 4566778889999887543
No 336
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=72.55 E-value=12 Score=30.15 Aligned_cols=73 Identities=16% Similarity=0.095 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHH
Q 027740 74 VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 152 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~ 152 (219)
+....++.+.+.|..-+.+......+ +....++..+..+++ +++||.+...- +. +
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~--~~~~~~~~~i~~i~~~~~ipvi~~g~i--------------------~~--~ 89 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAP--EGRATFIDSVKRVAEAVSIPVLVGGGV--------------------RS--L 89 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCT--TTHHHHHHHHHHHHHHCSSCEEEESSC--------------------CS--H
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccc--cCCcccHHHHHHHHHhcCCCEEEECCC--------------------CC--H
Confidence 45556667778888778776544332 111235666777777 78999873211 11 3
Q ss_pred HHHHHHHHcCCcEEEEee
Q 027740 153 CIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 153 ~~~~aAvalGA~GlvIEk 170 (219)
..+..+.++||++++|-.
T Consensus 90 ~~~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 90 EDATTLFRAGADKVSVNT 107 (253)
T ss_dssp HHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHcCCCEEEECh
Confidence 344677888999877654
No 337
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=72.52 E-value=47 Score=29.23 Aligned_cols=101 Identities=14% Similarity=0.032 Sum_probs=62.4
Q ss_pred HHHHHHHHhc---CCeEEEeCCC------CCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCC-CCCccchhHHHHHh-
Q 027740 49 TDLLVAAAKT---GKIINIKKGQ------FCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYN-DLIVDPRNLEWMRE- 116 (219)
Q Consensus 49 ~~LL~~~a~~---gkPVilstG~------~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~-~~~-~~~~nl~~i~~lk~- 116 (219)
.++++++-+. +.||.++-.. +.+++|....++.+.+. ..-|.+-+.+... +.+ ....++..+..+|+
T Consensus 197 ~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~ 275 (343)
T 3kru_A 197 IEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR 275 (343)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHh
Confidence 3566666553 5799997654 23688888888888766 4444443322211 100 11246667778888
Q ss_pred cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeeec
Q 027740 117 ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 172 (219)
Q Consensus 117 ~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH~ 172 (219)
+++||+....-. . +..+..+++.| ||++++=+-+
T Consensus 276 ~~iPVi~~Ggi~-----------------t-----~e~Ae~~l~~G~aD~V~iGR~~ 310 (343)
T 3kru_A 276 CNIKTSAVGLIT-----------------T-----QELAEEILSNERADLVALGREL 310 (343)
T ss_dssp HTCEEEEESSCC-----------------C-----HHHHHHHHHTTSCSEEEESHHH
T ss_pred cCcccceeeeee-----------------H-----HHHHHHHHhchhhHHHHHHHHH
Confidence 899998743322 1 45677888888 9987776553
No 338
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=72.39 E-value=62 Score=30.07 Aligned_cols=142 Identities=17% Similarity=0.139 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHh--cCCCeEeeeCCcccHHHHhhh------ccccccC--CCCCCCHHHHHHHHhcC-CeEEEeCCCC--
Q 027740 3 EGLKILEKVKIA--YDIPIVTDVHETVQCEEVGKV------ADIIQIP--AFLCRQTDLLVAAAKTG-KIINIKKGQF-- 69 (219)
Q Consensus 3 ~gl~~L~~~~~~--~Gi~~~tt~~d~~~~~~l~~~------vd~~kI~--S~~~~n~~LL~~~a~~g-kPVilstG~~-- 69 (219)
+|-..+.+.|++ .|++++.+-+...+++.+.+. .-|+|+- +..-....+++.+.+.| +-++|.-++.
T Consensus 207 ~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~ 286 (511)
T 1kbi_A 207 EGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSL 286 (511)
T ss_dssp TTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSC
T ss_pred hHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCc
Confidence 355678999999 999998877766777766543 3467773 22222345666666666 4566666532
Q ss_pred CC-HHHHHHHH----HHHHH-cCCCcEEEEeecC---CC--CCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCcc
Q 027740 70 CA-SSVMVNSA----EKVRL-AGNPNVMVCERGT---MF--GYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKL 137 (219)
Q Consensus 70 ~t-~~ei~~A~----e~i~~-~Gn~~i~L~~cgs---~~--~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~ 137 (219)
+. ..++.+.. +.+.. .|.. ...++ .+ ...+..++...|.++|+ +++||++= .+
T Consensus 287 g~R~~~~r~g~~~p~~~~~~~~g~~----~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivK---gv-------- 351 (511)
T 1kbi_A 287 GQREKDMKLKFSNTKAGPKAMKKTN----VEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK---GV-------- 351 (511)
T ss_dssp CCCHHHHHHHHTTCC-------CCC----CSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEE---EE--------
T ss_pred cccHHHHhccCCCCccccccccccc----ccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEE---eC--------
Confidence 11 45554431 01111 1100 00011 00 00112355677889998 89999872 00
Q ss_pred CCCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 138 DGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 138 ~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
.. ...++.+...||||+++=-|
T Consensus 352 -------~~-----~e~A~~a~~aGad~I~vs~h 373 (511)
T 1kbi_A 352 -------QR-----TEDVIKAAEIGVSGVVLSNH 373 (511)
T ss_dssp -------CS-----HHHHHHHHHTTCSEEEECCT
T ss_pred -------CC-----HHHHHHHHHcCCCEEEEcCC
Confidence 01 45688899999999888555
No 339
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=71.99 E-value=13 Score=33.04 Aligned_cols=85 Identities=16% Similarity=0.137 Sum_probs=61.5
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcccHHHHhhh-ccccccCC---CCC----CCHHHHHHHHh-c--CCeEEEeCCCCCCH
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETVQCEEVGKV-ADIIQIPA---FLC----RQTDLLVAAAK-T--GKIINIKKGQFCAS 72 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S---~~~----~n~~LL~~~a~-~--gkPVilstG~~~t~ 72 (219)
.+.++.+++..++|++. .+.+++.+..+.+. +|++.|.. +.. ...++|.++.+ . +.|||.+-|.. +.
T Consensus 218 ~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~-~g 296 (368)
T 2nli_A 218 PRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVR-RG 296 (368)
T ss_dssp HHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCC-SH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCC-CH
Confidence 34577777778999887 68888999998888 99998844 222 23566666654 2 68999999999 99
Q ss_pred HHHHHHHHHHHHcCCCcEEEEee
Q 027740 73 SVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
+++..++. .|.. .+.+=|
T Consensus 297 ~D~~kala----lGAd-~V~iGr 314 (368)
T 2nli_A 297 EHVAKALA----SGAD-VVALGR 314 (368)
T ss_dssp HHHHHHHH----TTCS-EEEECH
T ss_pred HHHHHHHH----cCCC-EEEECH
Confidence 99988754 4754 444433
No 340
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=71.97 E-value=5.7 Score=34.75 Aligned_cols=72 Identities=18% Similarity=0.281 Sum_probs=41.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCccchhH---HHHHh-cCCCEEEcCCCCCCCCCCCccCCCCc
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVDPRNL---EWMRE-ANCPVVADVTHSLQQPAGKKLDGGGV 142 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~----~~~nl~~i---~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~ 142 (219)
+.+++..-++...+.|-.=|=+.-..+..+++. +++. |.+ ..+++ +++||.+|+.+
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~-RvvpvI~~l~~~~~vpiSIDT~~--------------- 124 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIK-RVVPMIQAVSKEVKLPISIDTYK--------------- 124 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHH-HHHHHHHHHHHHSCSCEEEECSC---------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHH-HHHHHHHHHHhcCCceEEEeCCC---------------
Confidence 356666666667778875444443334333322 2222 334 44455 69999998664
Q ss_pred cCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 143 ASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 143 ~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+.++++|+.+||+ +|.
T Consensus 125 ---------~~V~~aAl~aGa~--iIN 140 (297)
T 1tx2_A 125 ---------AEVAKQAIEAGAH--IIN 140 (297)
T ss_dssp ---------HHHHHHHHHHTCC--EEE
T ss_pred ---------HHHHHHHHHcCCC--EEE
Confidence 4677788888888 664
No 341
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=71.91 E-value=20 Score=29.25 Aligned_cols=89 Identities=9% Similarity=-0.011 Sum_probs=58.5
Q ss_pred HHHHHHHHHhcCCCeEeee--CCcccHHHHhh---h-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC--------
Q 027740 5 LKILEKVKIAYDIPIVTDV--HETVQCEEVGK---V-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC-------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~--~d~~~~~~l~~---~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~-------- 70 (219)
+.-+.+.+++.|..++... .+.++.+.+.. . +|.+-+.+.+.. .+.++.+.+ +.||++=.....
T Consensus 30 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~~~~-~iPvV~i~~~~~~~~~~~V~ 107 (289)
T 3k9c_A 30 VEQIYAAATRRGYDVMLSAVAPSRAEKVAVQALMRERCEAAILLGTRFD-TDELGALAD-RVPALVVARASGLPGVGAVR 107 (289)
T ss_dssp HHHHHHHHHHTTCEEEEEEEBTTBCHHHHHHHHTTTTEEEEEEETCCCC-HHHHHHHHT-TSCEEEESSCCSSTTSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHhCCCCEEEEECCCCC-HHHHHHHHc-CCCEEEEcCCCCCCCCCEEE
Confidence 4567788999998776533 33333444433 3 777666655543 477888877 999887543210
Q ss_pred --CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 --ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 --t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...|++++.+.|..+|.++..
T Consensus 108 ~D~~~~~~~a~~~L~~~G~~~I~~i~~ 134 (289)
T 3k9c_A 108 GDDVAGITLAVDHLTELGHRNIAHIDG 134 (289)
T ss_dssp ECHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred eChHHHHHHHHHHHHHCCCCcEEEEeC
Confidence 2345667889999999999988864
No 342
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=71.89 E-value=22 Score=30.25 Aligned_cols=93 Identities=9% Similarity=-0.029 Sum_probs=56.0
Q ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCc--EEEEeecCCCCCCC---CCcc----chhHHHHHh-cCCCEEEcCCC
Q 027740 58 TGKIINIKKGQFCASSVMVNSAEKVRLAGNPN--VMVCERGTMFGYND---LIVD----PRNLEWMRE-ANCPVVADVTH 127 (219)
Q Consensus 58 ~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~--i~L~~cgs~~~~~~---~~~n----l~~i~~lk~-~~~pV~~ds~H 127 (219)
.++|++++-+.. +++++..+++.+...|-.- .+-++.++-. .+. .--| ...+..+|+ .++||++=-+-
T Consensus 92 ~~~p~~~~i~g~-~~~~~~~~a~~~~~~g~d~~~~iein~~~P~-~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~ 169 (314)
T 2e6f_A 92 SKKPLFLSISGL-SVEENVAMVRRLAPVAQEKGVLLELNLSCPN-VPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPP 169 (314)
T ss_dssp TTCCEEEEECCS-SHHHHHHHHHHHHHHHHHHCCEEEEECCCCC-STTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECC
T ss_pred CCCcEEEEeCCC-CHHHHHHHHHHHHHhCCCcCceEEEEcCCCC-CCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 368999998866 8999999999998876431 5556654321 111 0001 234556676 68898762110
Q ss_pred CCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEe
Q 027740 128 SLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFME 169 (219)
Q Consensus 128 s~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIE 169 (219)
.. . .+-+..++..+...| +||+.+-
T Consensus 170 ~~----------------~-~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 170 YF----------------D-IAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp CC----------------C-HHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CC----------------C-HHHHHHHHHHHHhcCCceEEEEe
Confidence 00 0 112244577788999 9966543
No 343
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=71.89 E-value=11 Score=34.44 Aligned_cols=116 Identities=16% Similarity=0.036 Sum_probs=65.0
Q ss_pred ccHHHHhhh-ccccccCCCCCC---CHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEe-----e
Q 027740 27 VQCEEVGKV-ADIIQIPAFLCR---QTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCE-----R 95 (219)
Q Consensus 27 ~~~~~l~~~-vd~~kI~S~~~~---n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~-----c 95 (219)
+.++.+.+. +|.+-+.+..-. ..++++++.+. +.||+.... .+.+....+ ...|..-+.+-- |
T Consensus 236 ~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v--~t~~~a~~~----~~~Gad~I~vg~g~g~~~ 309 (491)
T 1zfj_A 236 ERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNI--ATAEGARAL----YDAGVDVVKVGIGPGSIC 309 (491)
T ss_dssp HHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEE--CSHHHHHHH----HHTTCSEEEECSSCCTTB
T ss_pred HHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCc--cCHHHHHHH----HHcCCCEEEECccCCcce
Confidence 556666666 888777763211 23456666553 789984433 366555544 457876665531 2
Q ss_pred cCCC--CCCCCCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 96 GTMF--GYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 96 gs~~--~~~~~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
++.+ ++. ..++.++..+.. .++||+.|. |.+. ..-...|.++||+++++=
T Consensus 310 ~tr~~~~~~--~p~~~~l~~~~~~~~~~~ipvia~G--------------------Gi~~--~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 310 TTRVVAGVG--VPQVTAIYDAAAVAREYGKTIIADG--------------------GIKY--SGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp CHHHHTCCC--CCHHHHHHHHHHHHHHTTCEEEEES--------------------CCCS--HHHHHHHHHTTCSEEEES
T ss_pred EEeeecCCC--CCcHHHHHHHHHHHhhcCCCEEeeC--------------------CCCC--HHHHHHHHHcCCcceeeC
Confidence 2221 121 224555555543 579998852 3222 233456788999999995
Q ss_pred eec
Q 027740 170 VHD 172 (219)
Q Consensus 170 kH~ 172 (219)
+-|
T Consensus 366 ~~~ 368 (491)
T 1zfj_A 366 SMF 368 (491)
T ss_dssp TTT
T ss_pred HHh
Confidence 444
No 344
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=71.50 E-value=43 Score=29.63 Aligned_cols=111 Identities=13% Similarity=0.161 Sum_probs=62.8
Q ss_pred HHHHHHHHHhcCCCe-EeeeCC-----cc-----cHHHHhhh-cc---------------ccccCCCC-CC--CH----H
Q 027740 5 LKILEKVKIAYDIPI-VTDVHE-----TV-----QCEEVGKV-AD---------------IIQIPAFL-CR--QT----D 50 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~-~tt~~d-----~~-----~~~~l~~~-vd---------------~~kI~S~~-~~--n~----~ 50 (219)
...+.+.+++.|+.+ .++=+. |. +++.+.++ ++ +-.||... .+ +. .
T Consensus 115 ~~~l~~la~~~gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~~~~ei~~Gi~~~~vkag~IGEiGld~~~t~~q~~~f~a 194 (364)
T 3k2g_A 115 PVKLRRISAETGVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALEGTDGTDARIGLIGEIGVSSDFTAEEEKSLRG 194 (364)
T ss_dssp HHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHTCBTTBSCCCSSEEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcEEEEeCccCCCCCchhhccCCHHHHHHHHHHHHHhccccCCcceeEEEEEEcCCCCCHHHHHHHHH
Confidence 567888889999754 445444 54 56666554 32 11454442 22 22 2
Q ss_pred HHHHHHhcCCeEEEeC-CCCCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEc
Q 027740 51 LLVAAAKTGKIINIKK-GQFCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 124 (219)
Q Consensus 51 LL~~~a~~gkPVilst-G~~~t~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~d 124 (219)
-++.+.++|+||++-+ |-.-...|+. +.+++.|.+ .++++||-.+ . .|+.....+-+.|+-++||
T Consensus 195 q~~~A~~~glPV~iH~~gr~~a~~e~l---~iL~e~g~~~~~vvi~H~~~s---~---~~~e~a~~~l~~G~~I~f~ 262 (364)
T 3k2g_A 195 AARAQVRTGLPLMVHLPGWFRLAHRVL---DLVEEEGADLRHTVLCHMNPS---H---MDPVYQATLAQRGAFLEFD 262 (364)
T ss_dssp HHHHHHHHCCCEEEECCTTSCCHHHHH---HHHHHTTCCGGGEEECCCGGG---T---TCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHCCeEEEecCCCCccHHHHH---HHHHHcCCCCCceEEECCCCC---C---CCHHHHHHHHhCCcEEEec
Confidence 3444566899999997 4311345554 456666654 5889999632 1 1333333332357778875
No 345
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=71.14 E-value=12 Score=34.53 Aligned_cols=72 Identities=21% Similarity=0.154 Sum_probs=45.4
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC-CCCCC-CCCCCCCChHHHHHHHHH
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD-PLNAP-VDGPTQWPLRNLEELLEE 196 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t-~d~a~-~D~~~sl~p~el~~lv~~ 196 (219)
+||.+|.|..- |...-+....+..+.+||.|+.||--.. |.|-- .+++.-.+.+|+-.=++.
T Consensus 153 lPviaD~DtGy----------------G~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~A 216 (435)
T 3lg3_A 153 LPIVADAEAGF----------------GGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVA 216 (435)
T ss_dssp CCEEEECTTCS----------------SSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHH
T ss_pred CCeEEECCCCC----------------CCcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHH
Confidence 99999999764 3222234556677999999999997653 44432 234445566666555555
Q ss_pred HHHHHHHhCC
Q 027740 197 LVAIAKVSKG 206 (219)
Q Consensus 197 ir~i~~~lg~ 206 (219)
.+.....+|.
T Consensus 217 a~~A~~~~~~ 226 (435)
T 3lg3_A 217 ARLAADVLGV 226 (435)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhcCC
Confidence 5555444554
No 346
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=71.14 E-value=39 Score=27.59 Aligned_cols=120 Identities=12% Similarity=0.043 Sum_probs=77.6
Q ss_pred HHHHhcCCCeEeeeCCcccHHH----Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 10 KVKIAYDIPIVTDVHETVQCEE----VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 10 ~~~~~~Gi~~~tt~~d~~~~~~----l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
+..++.++..+-...++++.-. +.+. ++++++.-.+..-.+.++++++.-..+.+--|...+.++++.|++
T Consensus 11 ~~l~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~---- 86 (214)
T 1wbh_A 11 SILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTE---- 86 (214)
T ss_dssp HHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHH----
T ss_pred HHHHHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHH----
Confidence 3346677777777777775433 3344 889999977766677888776654345566666668888887755
Q ss_pred cCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 85 AGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 85 ~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
.|-.-+ |.+. .|+..+...+..+.+++. .-|+ +.-+..|.+.|||
T Consensus 87 aGAd~v---~~p~--------~d~~v~~~~~~~g~~~i~-G~~t-----------------------~~e~~~A~~~Gad 131 (214)
T 1wbh_A 87 AGAQFA---ISPG--------LTEPLLKAATEGTIPLIP-GIST-----------------------VSELMLGMDYGLK 131 (214)
T ss_dssp HTCSCE---EESS--------CCHHHHHHHHHSSSCEEE-EESS-----------------------HHHHHHHHHTTCC
T ss_pred cCCCEE---EcCC--------CCHHHHHHHHHhCCCEEE-ecCC-----------------------HHHHHHHHHCCCC
Confidence 466544 3321 355555555558888765 3455 3445788999999
Q ss_pred EEEE
Q 027740 165 GVFM 168 (219)
Q Consensus 165 GlvI 168 (219)
-+-+
T Consensus 132 ~v~~ 135 (214)
T 1wbh_A 132 EFKF 135 (214)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 347
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=70.90 E-value=20 Score=28.97 Aligned_cols=89 Identities=10% Similarity=0.030 Sum_probs=50.1
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCC
Q 027740 50 DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTH 127 (219)
Q Consensus 50 ~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~H 127 (219)
++++.+.++|+||++-++. +.+++.. .+++.|.+ ++++ ||.+. +...+..+.+.|+-+.++..-
T Consensus 115 ~~~~~a~~~~~pv~iH~~~--~~~~~~~---~l~~~~~p~~~~v~-H~~~~--------~~~~~~~~~~~g~~~~~sg~~ 180 (265)
T 1yix_A 115 HHIQIGRELNKPVIVHTRD--ARADTLA---ILREEKVTDCGGVL-HCFTE--------DRETAGKLLDLGFYISFSGIV 180 (265)
T ss_dssp HHHHHHHHHTCCEEEEEES--CHHHHHH---HHHHTTGGGTCEEE-TTCCS--------CHHHHHHHHTTTCEEEECGGG
T ss_pred HHHHHHHHhCCCEEEEecC--chHHHHH---HHHhcCCCCCCEEE-EcCCC--------CHHHHHHHHHCCcEEEECCcc
Confidence 5677788899999998884 4666554 44444433 5654 98531 223333343346655553211
Q ss_pred CCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 128 SLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 128 s~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
+. . .+ ..+..++-..|.+-+++|+=
T Consensus 181 ~~--~------------~~-----~~~~~~~~~~~~drll~~TD 205 (265)
T 1yix_A 181 TF--R------------NA-----EQLRDAARYVPLDRLLVETD 205 (265)
T ss_dssp GS--T------------TC-----HHHHHHHHHSCGGGEEECCC
T ss_pred cc--C------------ch-----HHHHHHHHhCChHHEEEecC
Confidence 10 0 01 23334455678888999963
No 348
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=70.89 E-value=16 Score=32.32 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC----C----CCcc--chhHHHHHh-cCCCEEEcCCCCCCCCCCCccC
Q 027740 70 CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN----D----LIVD--PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLD 138 (219)
Q Consensus 70 ~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~----~----~~~n--l~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~ 138 (219)
.+++++..-++...+.|-.=|=+.=..+..+.. . ++++ +..|..+++ +++||.+|+.+
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~----------- 114 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSR----------- 114 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSC-----------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCC-----------
Confidence 478888888888888898644443332332222 1 1111 123445556 79999999665
Q ss_pred CCCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 139 GGGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 139 ~~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+.++++|+.+||+ +|-
T Consensus 115 -------------~~Va~aAl~aGa~--iIN 130 (314)
T 3tr9_A 115 -------------PRVMREAVNTGAD--MIN 130 (314)
T ss_dssp -------------HHHHHHHHHHTCC--EEE
T ss_pred -------------HHHHHHHHHcCCC--EEE
Confidence 4667788888887 554
No 349
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=70.88 E-value=7.5 Score=34.40 Aligned_cols=91 Identities=14% Similarity=0.150 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHhcCCCeEeeeC----------CcccHHHH-------hhh-cc----ccccCCCCCCCHHHHHHHHhcCC
Q 027740 3 EGLKILEKVKIAYDIPIVTDVH----------ETVQCEEV-------GKV-AD----IIQIPAFLCRQTDLLVAAAKTGK 60 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~----------d~~~~~~l-------~~~-vd----~~kI~S~~~~n~~LL~~~a~~gk 60 (219)
+-+..+.+.|+++||+++.+|| ++.+.+.+ .++ .| ++|++-- . .+-+-++.+..
T Consensus 163 ~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y~--e--~f~~Vv~a~~v 238 (307)
T 3fok_A 163 EATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVV--E--EMERVMESTTM 238 (307)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECC--T--THHHHGGGCSS
T ss_pred HHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCCc--H--HHHHHHHhCCC
Confidence 3466777889999999999842 12234433 345 78 9999654 2 34455556789
Q ss_pred eEEEeCCCCC-CHHHHHHHHHHHHH-cCCCcEEEEeecCC
Q 027740 61 IINIKKGQFC-ASSVMVNSAEKVRL-AGNPNVMVCERGTM 98 (219)
Q Consensus 61 PVilstG~~~-t~~ei~~A~e~i~~-~Gn~~i~L~~cgs~ 98 (219)
||++.-|... +.+|+++-++.... .|.. =+.+=|..-
T Consensus 239 PVViaGG~k~~~~~e~L~~v~~A~~~aGa~-Gv~vGRNIf 277 (307)
T 3fok_A 239 PTLLLGGEGGNDPDATFASWEHALTLPGVR-GLTVGRTLL 277 (307)
T ss_dssp CEEEECCSCC--CHHHHHHHHHHTTSTTEE-EEEECTTTS
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHHHhCCCe-EEeechhhc
Confidence 9999988874 56888888877776 5653 344555443
No 350
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=70.86 E-value=18 Score=30.52 Aligned_cols=135 Identities=19% Similarity=0.218 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCC-CHHH-----HHHHHhcC------CeEE----EeC
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCR-QTDL-----LVAAAKTG------KIIN----IKK 66 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~-n~~L-----L~~~a~~g------kPVi----lst 66 (219)
+.++.+++.++ ..+|++-.+.....+ ..-+|.+-|+.--.. +..+ .+++-+.| .+|. |-+
T Consensus 49 ~~~~~v~~ir~-~~~Pivlm~y~~n~i---~~G~dg~iiPdLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~ 124 (240)
T 1viz_A 49 NVLRMMSKVRR-FLVPCVLEVSAIEAI---VPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIAN 124 (240)
T ss_dssp HHHHHHHHHTT-SSSCEEEECSCGGGC---CSCCSEEEEEEETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECC
T ss_pred HHHHHHHHhhC-cCCCEEEecCccccc---cCCCCEEEEcccCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEEC
Confidence 45677777766 899999877774333 223777777766444 4444 46665655 4554 533
Q ss_pred CCC-----------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c-CCCEEEcCCCCCCCCC
Q 027740 67 GQF-----------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVVADVTHSLQQPA 133 (219)
Q Consensus 67 G~~-----------~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~~ds~Hs~~~~~ 133 (219)
..+ -+.+.+...++.=...+ ..++-|.. + +.+ .|...+..+++ + ++||.+-
T Consensus 125 P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~-~~~VYl~s-~--G~~---~~~~~i~~i~~~~~~~Pv~vG--------- 188 (240)
T 1viz_A 125 PDCKAAALTEADADLNMDDIVAYARVSELLQ-LPIFYLEY-S--GVL---GDIEAVKKTKAVLETSTLFYG--------- 188 (240)
T ss_dssp TTSHHHHHTTBCCCCCHHHHHHHHHHHHHTT-CSEEEEEC-T--TSC---CCHHHHHHHHHTCSSSEEEEE---------
T ss_pred CCCceEEeeccCCCCCHHHHHHHHHhCcccC-CCEEEEeC-C--Ccc---ChHHHHHHHHHhcCCCCEEEE---------
Confidence 322 12343333322111111 13444443 2 332 47788888888 7 8998872
Q ss_pred CCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 134 GKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 134 ~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
+|.+. +..+..+.. ||||+++=+-
T Consensus 189 -----------gGI~t--~e~a~~~~~-gAd~VIVGSa 212 (240)
T 1viz_A 189 -----------GGIKD--AETAKQYAE-HADVIVVGNA 212 (240)
T ss_dssp -----------SSCCS--HHHHHHHHT-TCSEEEECTH
T ss_pred -----------eccCC--HHHHHHHHh-CCCEEEEChH
Confidence 24332 444555566 9999998654
No 351
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=70.73 E-value=5.7 Score=32.05 Aligned_cols=90 Identities=7% Similarity=-0.093 Sum_probs=51.1
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Ccc----cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETV----QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~----~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++.... ++. .++.+.+. +|.+-+.+.+... +.++.+.+.+.||++=.....
T Consensus 18 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~~~~~~~iPvV~~~~~~~~~~~V~~ 96 (276)
T 2h0a_A 18 VEGIEGVLLEQRYDLALFPILSLARLKRYLENTTLAYLTDGLILASYDLTE-RFEEGRLPTERPVVLVDAQNPRYDSVYL 96 (276)
T ss_dssp HHHHHHHHGGGTCEEEECCCCSCCCCC---------CCCSEEEEESCCCC-------CCSCSSCEEEESSCCTTSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecCCCCH-HHHHHHhhcCCCEEEEeccCCCCCEEEE
Confidence 56678888999987765332 221 23333333 7766665544433 667777778999876433210
Q ss_pred -CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 -ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 -t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|.++|.++..
T Consensus 97 d~~~~~~~a~~~L~~~G~~~i~~i~~ 122 (276)
T 2h0a_A 97 DNRLGGRLAGAYLARFPGPIFAIAVE 122 (276)
T ss_dssp CSHHHHHHHHHHHTTSSSCEEEEEEC
T ss_pred ccHHHHHHHHHHHHHcCCCeEEEEec
Confidence 3455677889999999999888753
No 352
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=70.61 E-value=6.1 Score=33.39 Aligned_cols=76 Identities=11% Similarity=0.044 Sum_probs=54.9
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCC-CHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHH
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEK 81 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~ 81 (219)
+.+.++|+++|++++--++++.++....++ +|++|+=..... -.++|+++..- +.|++ -+|-- +++ ++.++
T Consensus 117 ~~vi~~~~~~gi~~ipGv~TptEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~ip~~-ptGGI-~~~---n~~~~ 191 (232)
T 4e38_A 117 PNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVGPYGDIRLM-PTGGI-TPS---NIDNY 191 (232)
T ss_dssp HHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHTTCTTCEEE-EBSSC-CTT---THHHH
T ss_pred HHHHHHHHHcCCCEEcCCCCHHHHHHHHHcCCCEEEECcCccccCHHHHHHHHHHhcCCCee-eEcCC-CHH---HHHHH
Confidence 356788999999999999999999998888 999998444443 36888888763 46766 45544 443 44555
Q ss_pred HHHcCC
Q 027740 82 VRLAGN 87 (219)
Q Consensus 82 i~~~Gn 87 (219)
+ +.|+
T Consensus 192 l-~aGa 196 (232)
T 4e38_A 192 L-AIPQ 196 (232)
T ss_dssp H-TSTT
T ss_pred H-HCCC
Confidence 5 3455
No 353
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=70.40 E-value=22 Score=31.49 Aligned_cols=28 Identities=11% Similarity=-0.032 Sum_probs=12.0
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~ 76 (219)
|.+.++++.+ ++.||..-=... +.+++.
T Consensus 233 d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~ 261 (391)
T 2qgy_A 233 NISLLTEIKNTFNMKVVTGEKQS-GLVHFR 261 (391)
T ss_dssp CHHHHHHHHHHCSSCEEECTTCC-SHHHHH
T ss_pred hHHHHHHHHhhCCCCEEEcCCcC-CHHHHH
Confidence 3444444432 345555443333 444433
No 354
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=70.37 E-value=19 Score=31.26 Aligned_cols=42 Identities=5% Similarity=0.025 Sum_probs=23.0
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEe
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCE 94 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~ 94 (219)
|.+.++++.+ ++.||..-=... |.+++...++ .|.-+++.+.
T Consensus 228 ~~~~~~~l~~~~~iPI~~de~~~-~~~~~~~~i~----~~~~d~v~ik 270 (359)
T 1mdl_A 228 DYEGHQRIQSKLNVPVQMGENWL-GPEEMFKALS----IGACRLAMPD 270 (359)
T ss_dssp CHHHHHHHHHTCSSCEEECTTCC-SHHHHHHHHH----TTCCSEECCB
T ss_pred hHHHHHHHHHhCCCCEEeCCCCC-CHHHHHHHHH----cCCCCEEeec
Confidence 5555665554 467777665555 6666554432 3444454443
No 355
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=70.20 E-value=26 Score=28.45 Aligned_cols=91 Identities=14% Similarity=0.021 Sum_probs=57.6
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--cc-c---HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TV-Q---CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~-~---~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++....+ ++ + ++.+.+. +|.+-+.+.+..+.++++.+.+.+.||++=.....
T Consensus 39 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V 118 (293)
T 2iks_A 39 ANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSV 118 (293)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSCTTCHHHHTTTTSSSCEEEEESCCCTTTCEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHhCCCCEEEECCccCcCCCCEE
Confidence 456778889999887654332 22 1 2333333 77766655554444567777778999876432110
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
...-...+++++.+.|..+|.++..
T Consensus 119 ~~d~~~~~~~a~~~L~~~G~~~I~~i~~ 146 (293)
T 2iks_A 119 VGADQDDAEMLAEELRKFPAETVLYLGA 146 (293)
T ss_dssp EECHHHHHHHHHHHHHTSCCSSEEEEEE
T ss_pred EecCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 1234566888999999999988864
No 356
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=70.18 E-value=13 Score=32.44 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=52.3
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c---CCCEEEcCCCCCCCCCCC
Q 027740 60 KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A---NCPVVADVTHSLQQPAGK 135 (219)
Q Consensus 60 kPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~---~~pV~~ds~Hs~~~~~~~ 135 (219)
..|||.||.- +.+|+..|++.....|.. ++-..+-|.+. -..+..+..||+ . +.+|++
T Consensus 176 lKVIlEt~~L-t~eei~~A~~ia~eaGAD---fVKTSTGf~~~--GAT~edv~lmr~~v~~~g~~v~V------------ 237 (288)
T 3oa3_A 176 LKVILETSQL-TADEIIAGCVLSSLAGAD---YVKTSTGFNGP--GASIENVSLMSAVCDSLQSETRV------------ 237 (288)
T ss_dssp EEEECCGGGC-CHHHHHHHHHHHHHTTCS---EEECCCSSSSC--CCCHHHHHHHHHHHHHSSSCCEE------------
T ss_pred ceEEEECCCC-CHHHHHHHHHHHHHcCCC---EEEcCCCCCCC--CCCHHHHHHHHHHHHHhCCCceE------------
Confidence 6789999976 999999999999988875 33333324222 245566666766 3 555555
Q ss_pred ccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 136 KLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 136 ~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
+.+||.|.. .-+++-+.+||+
T Consensus 238 ------KAAGGIrt~--edAl~mi~aGA~ 258 (288)
T 3oa3_A 238 ------KASGGIRTI--EDCVKMVRAGAE 258 (288)
T ss_dssp ------EEESSCCSH--HHHHHHHHTTCS
T ss_pred ------EEeCCCCCH--HHHHHHHHcCCc
Confidence 123566653 456777889997
No 357
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=70.13 E-value=19 Score=29.78 Aligned_cols=43 Identities=12% Similarity=0.025 Sum_probs=30.7
Q ss_pred HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC--CCcEEEEeecC
Q 027740 49 TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG--NPNVMVCERGT 97 (219)
Q Consensus 49 ~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G--n~~i~L~~cgs 97 (219)
.++++.+.++|+||++-++.+ .+++. +.+.+.+ +..+++ ||.+
T Consensus 123 ~~~~~~a~~~~lPv~iH~~~~--~~~~~---~il~~~p~~~~~~I~-H~~~ 167 (268)
T 1j6o_A 123 VEQIELAGKLNLPLVVHIRDA--YSEAY---EILRTESLPEKRGVI-HAFS 167 (268)
T ss_dssp HHHHHHHHHHTCCEEEEEESC--HHHHH---HHHHHSCCCSSCEEE-TTCC
T ss_pred HHHHHHHHHhCCCEEEEeCch--HHHHH---HHHHhcCCCCCCEEE-EcCC
Confidence 467888889999999998844 55554 4455556 556777 9853
No 358
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=69.88 E-value=34 Score=29.91 Aligned_cols=26 Identities=23% Similarity=0.023 Sum_probs=21.6
Q ss_pred CCCCHHHHHHHHh-cCCeEEEeCCCCC
Q 027740 45 LCRQTDLLVAAAK-TGKIINIKKGQFC 70 (219)
Q Consensus 45 ~~~n~~LL~~~a~-~gkPVilstG~~~ 70 (219)
.=+|...|+++++ +|..|+.+||...
T Consensus 71 ~gR~~~~l~~is~~tgv~iv~~TG~y~ 97 (330)
T 3pnz_A 71 YGRRVLDVAQISKETGIQIVGTAGFNK 97 (330)
T ss_dssp GCBCHHHHHHHHHHHCCEEEEEEECCC
T ss_pred cccCHHHHHHHHHHhCCEEEEeCCCCc
Confidence 3368888988886 7999999999873
No 359
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=68.93 E-value=9.8 Score=33.08 Aligned_cols=84 Identities=8% Similarity=0.182 Sum_probs=58.8
Q ss_pred HHHHHHHHHhcCCCeEee-e---CCcccHHHHhhh-ccccccCCCC---------------------C----CCHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTD-V---HETVQCEEVGKV-ADIIQIPAFL---------------------C----RQTDLLVA 54 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt-~---~d~~~~~~l~~~-vd~~kI~S~~---------------------~----~n~~LL~~ 54 (219)
++.++++++ .++|++.- + ++++++..+.+. +|++.+...- . .....|.+
T Consensus 171 ~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 249 (332)
T 1vcf_A 171 VERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILE 249 (332)
T ss_dssp HHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHH
T ss_pred HHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHH
Confidence 456666767 89999987 7 888888888888 9999884321 1 12344455
Q ss_pred HHh-c-CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 55 AAK-T-GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 55 ~a~-~-gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
+.+ . +.||+.+-|.. +.+++..++. .|. +.+.+=|
T Consensus 250 v~~~~~~ipvia~GGI~-~~~d~~kal~----~GA-d~V~igr 286 (332)
T 1vcf_A 250 VREVLPHLPLVASGGVY-TGTDGAKALA----LGA-DLLAVAR 286 (332)
T ss_dssp HHHHCSSSCEEEESSCC-SHHHHHHHHH----HTC-SEEEECG
T ss_pred HHHhcCCCeEEEECCCC-CHHHHHHHHH----hCC-ChHhhhH
Confidence 544 3 69999999999 9999888765 365 3444444
No 360
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=68.77 E-value=24 Score=29.06 Aligned_cols=90 Identities=12% Similarity=0.089 Sum_probs=59.7
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc------cHHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCCeEEEeCCCC----C--
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV------QCEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQF----C-- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~------~~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gkPVilstG~~----~-- 70 (219)
+.-+.++++++|..++....+.. .++.+.+. +|.+-+.+.+.. ..+.++.+.+.|.||++=.... .
T Consensus 21 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~ 100 (313)
T 3m9w_A 21 RDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 100 (313)
T ss_dssp HHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCCTTSCCSE
T ss_pred HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcCCCCCceE
Confidence 56678899999988776444322 12233333 787777666555 3688999999999998743221 0
Q ss_pred -----CHHHHHHHHHHHH-HcCCCcEEEEe
Q 027740 71 -----ASSVMVNSAEKVR-LAGNPNVMVCE 94 (219)
Q Consensus 71 -----t~~ei~~A~e~i~-~~Gn~~i~L~~ 94 (219)
..+-...+++++. ..|..+|.++-
T Consensus 101 ~V~~D~~~~g~~a~~~L~~~~G~~~i~~i~ 130 (313)
T 3m9w_A 101 YISFDNEKVGELQAKALVDIVPQGNYFLMG 130 (313)
T ss_dssp EEEECHHHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred EEecCHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 1234566888888 88988888774
No 361
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=68.56 E-value=12 Score=33.67 Aligned_cols=85 Identities=13% Similarity=0.121 Sum_probs=59.6
Q ss_pred HHHHHHHHHhcCCCeEe-eeCCcccHHHHhhh-ccccccCCCC-------CCCHHHHHHHHh-c--CCeEEEeCCCCCCH
Q 027740 5 LKILEKVKIAYDIPIVT-DVHETVQCEEVGKV-ADIIQIPAFL-------CRQTDLLVAAAK-T--GKIINIKKGQFCAS 72 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~-------~~n~~LL~~~a~-~--gkPVilstG~~~t~ 72 (219)
.+.++++++..++|++. .+.+++.+..+.+. +|++.|...- ....+.|.++.+ . +.||+.+-|.. +.
T Consensus 241 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~-~g 319 (392)
T 2nzl_A 241 WEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVR-KG 319 (392)
T ss_dssp HHHHHHHC--CCSCEEEEEECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCC-SH
T ss_pred HHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCC-CH
Confidence 34567777778999887 67888889988888 9999884321 224566666654 2 58999999999 99
Q ss_pred HHHHHHHHHHHHcCCCcEEEEee
Q 027740 73 SVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
+++..++. .|.. .+.+=|
T Consensus 320 ~Dv~kala----lGAd-~V~iGr 337 (392)
T 2nzl_A 320 TDVLKALA----LGAK-AVFVGR 337 (392)
T ss_dssp HHHHHHHH----TTCS-EEEECH
T ss_pred HHHHHHHH----hCCC-eeEECH
Confidence 99998865 4654 444433
No 362
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=68.43 E-value=14 Score=35.11 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=47.3
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeec-CCCCCC-CCCCCCCChHHHHHHHHH
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD-DPLNAP-VDGPTQWPLRNLEELLEE 196 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~-t~d~a~-~D~~~sl~p~el~~lv~~ 196 (219)
+||++|.|..- |...-+....+..+.+||.|+.||--. .|.|.= -+++.-.+.+|+-.=++.
T Consensus 163 lPIiaD~DtGf----------------G~~~nv~~tvk~~ieAGaAGihIEDQ~~~~KkCGH~~GK~Lvp~ee~v~rI~A 226 (538)
T 1dqu_A 163 RPIIADADTGH----------------GGLTAVMKLTKLFVERGAAGIHIEDQAPGTKKCGHMAGKVLVPISEHINRLVA 226 (538)
T ss_dssp CCEEEECTTCS----------------SSHHHHHHHHHHHHHTTCSEEEECSBCTTCC------CEEECCHHHHHHHHHH
T ss_pred CceEEecCCcC----------------CchHHHHHHHHHHHHcCCeEEEeeccCCCCCCcCCCCCCeecCHHHHHHHHHH
Confidence 89999999764 333335566778899999999999775 355431 244555677777666666
Q ss_pred HHHHHHHhCC
Q 027740 197 LVAIAKVSKG 206 (219)
Q Consensus 197 ir~i~~~lg~ 206 (219)
.|.....+|.
T Consensus 227 Ar~A~d~~g~ 236 (538)
T 1dqu_A 227 IRAQADIMGT 236 (538)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 6666655554
No 363
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=68.41 E-value=28 Score=28.08 Aligned_cols=91 Identities=11% Similarity=-0.084 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCccc---HHH---Hhhh-ccccccCCCCC-CCHHHHHHHHhcCCeEEEeCCCCC-----
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQ---CEE---VGKV-ADIIQIPAFLC-RQTDLLVAAAKTGKIINIKKGQFC----- 70 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~---~~~---l~~~-vd~~kI~S~~~-~n~~LL~~~a~~gkPVilstG~~~----- 70 (219)
-+.-+.++++++|..++....+... .+. +.+. +|.+-+.+.+. ...+.++.+.+.|.||++-.....
T Consensus 23 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 102 (291)
T 3l49_A 23 AYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATPHAINN 102 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCTTCSEE
T ss_pred HHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCCCcCce
Confidence 3567888999999988775544322 222 3333 77777665542 356778888889999887543221
Q ss_pred ----CHHHHHHHHHHHHH--cCCCcEEEEe
Q 027740 71 ----ASSVMVNSAEKVRL--AGNPNVMVCE 94 (219)
Q Consensus 71 ----t~~ei~~A~e~i~~--~Gn~~i~L~~ 94 (219)
..+-...+++++.+ .|..+|.++.
T Consensus 103 V~~D~~~~g~~~~~~l~~~~~g~~~i~~i~ 132 (291)
T 3l49_A 103 TTSNNYSIGAELALQMVADLGGKGNVLVFN 132 (291)
T ss_dssp EEECHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EecChHHHHHHHHHHHHHHcCCCceEEEEe
Confidence 12346778889998 8999998884
No 364
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=68.39 E-value=50 Score=27.84 Aligned_cols=89 Identities=8% Similarity=-0.026 Sum_probs=56.1
Q ss_pred HHHHHHHHHhcCCCeEeeeCCc--c-c---HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHET--V-Q---CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~--~-~---~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++....+. + + ++.+.+. +|.+-+.+.+.. .+.++.+.+.+.||++=.....
T Consensus 85 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~~~~~~~~~ 163 (348)
T 3bil_A 85 VTEIQSTASKAGLATIITNSNEDATTMSGSLEFLTSHGVDGIICVPNEEC-ANQLEDLQKQGMPVVLVDRELPGDSTIPT 163 (348)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSCEEECCCGGG-HHHHHHHHHC-CCEEEESSCCSCC-CCCE
T ss_pred HHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHHhCCCCEEEEcccCCCCCCCCE
Confidence 4567788899998876644332 1 1 2333333 776666554433 4677888788999876432110
Q ss_pred ----CHHHHHHHHHHHHHcCCCcEEEEe
Q 027740 71 ----ASSVMVNSAEKVRLAGNPNVMVCE 94 (219)
Q Consensus 71 ----t~~ei~~A~e~i~~~Gn~~i~L~~ 94 (219)
...-...|++++.+.|..+|.++.
T Consensus 164 V~~D~~~~~~~a~~~L~~~G~~~I~~i~ 191 (348)
T 3bil_A 164 ATSNPQPGIAAAVELLAHNNALPIGYLS 191 (348)
T ss_dssp EEEECHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred EEeChHHHHHHHHHHHHHCCCCeEEEEe
Confidence 124467789999999999998875
No 365
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=68.15 E-value=18 Score=30.69 Aligned_cols=139 Identities=11% Similarity=0.024 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHhc-CCCeEeee--CCcc-cHHHHhhh-ccccccCCCCCCC-HHHHHHHHhcCCeEEEeCCCCCCHHHHH
Q 027740 3 EGLKILEKVKIAY-DIPIVTDV--HETV-QCEEVGKV-ADIIQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFCASSVMV 76 (219)
Q Consensus 3 ~gl~~L~~~~~~~-Gi~~~tt~--~d~~-~~~~l~~~-vd~~kI~S~~~~n-~~LL~~~a~~gkPVilstG~~~t~~ei~ 76 (219)
-|.+.+++.++.. .+++-.-. .+++ -++.+.+. +|++-+......+ ...++++-+.|+-+.+..... |.-|..
T Consensus 72 ~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~-Tp~e~l 150 (246)
T 3inp_A 72 FGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPA-TGIDCL 150 (246)
T ss_dssp CCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTT-CCSGGG
T ss_pred cCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCC-CCHHHH
Confidence 3667777777666 67766533 3332 34444555 8888887766555 467888888898888887777 544332
Q ss_pred HHHHHHHHcCCCcEEEEeecCCCCCCCC---CccchhHHHHHh------cCCCEEEcCCCCCCCCCCCccCCCCccCCCC
Q 027740 77 NSAEKVRLAGNPNVMVCERGTMFGYNDL---IVDPRNLEWMRE------ANCPVVADVTHSLQQPAGKKLDGGGVASGGL 147 (219)
Q Consensus 77 ~A~e~i~~~Gn~~i~L~~cgs~~~~~~~---~~nl~~i~~lk~------~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~ 147 (219)
. .+.. + .+.+++-++- .++.-. .-.+.-|..+|+ .+++|.+|. |.
T Consensus 151 ~---~~l~-~-vD~VlvMsV~-PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDG--------------------GI 204 (246)
T 3inp_A 151 K---YVES-N-IDRVLIMSVN-PGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDG--------------------GV 204 (246)
T ss_dssp T---TTGG-G-CSEEEEECSC-TTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEES--------------------SC
T ss_pred H---HHHh-c-CCEEEEeeec-CCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEEC--------------------Cc
Confidence 2 2222 2 3566655432 122111 123444555554 247787762 22
Q ss_pred cccHHHHHHHHHHcCCcEEEEeee
Q 027740 148 RELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 148 ~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
. ...+..++.+|||.+++=+-
T Consensus 205 ~---~~ti~~~~~aGAD~~V~GSa 225 (246)
T 3inp_A 205 N---PYNIAEIAVCGVNAFVAGSA 225 (246)
T ss_dssp C---TTTHHHHHTTTCCEEEESHH
T ss_pred C---HHHHHHHHHcCCCEEEEehH
Confidence 2 22355789999998777654
No 366
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=67.51 E-value=14 Score=30.24 Aligned_cols=72 Identities=15% Similarity=0.080 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHH
Q 027740 74 VMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIP 152 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~ 152 (219)
+..+.++.+.+.|..-+.+......+ .....++..+..+++ +++||.+.. |.+. +
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~--~~~~~~~~~i~~i~~~~~ipvi~~g--------------------gI~~--~ 86 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASV--EKRKTMLELVEKVAEQIDIPFTVGG--------------------GIHD--F 86 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSS--SHHHHHHHHHHHHHTTCCSCEEEES--------------------SCCS--H
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhh--cCCcccHHHHHHHHHhCCCCEEEeC--------------------CCCC--H
Confidence 33444466677888877777654332 112245667777777 789998731 2221 3
Q ss_pred HHHHHHHHcCCcEEEEe
Q 027740 153 CIARTAIAVGVDGVFME 169 (219)
Q Consensus 153 ~~~~aAvalGA~GlvIE 169 (219)
.-+..+.+.||||+++=
T Consensus 87 ~~~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 87 ETASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 34566778899987763
No 367
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=67.48 E-value=51 Score=27.14 Aligned_cols=119 Identities=14% Similarity=0.164 Sum_probs=76.1
Q ss_pred HHHhcCCCeEeeeCCcccHHH----Hhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Q 027740 11 VKIAYDIPIVTDVHETVQCEE----VGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLA 85 (219)
Q Consensus 11 ~~~~~Gi~~~tt~~d~~~~~~----l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~ 85 (219)
..++.++.-+-...+.++... +.+. ++++++.-.+..-.+.++++++.-..+.+--|.-.+.++++.|++ .
T Consensus 13 ~l~~~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~----a 88 (224)
T 1vhc_A 13 KLRELKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKS----S 88 (224)
T ss_dssp HHHHHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHH----H
T ss_pred HHHHCCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHH----C
Confidence 345677776666677765533 3344 889999877666677888777654456666666657888887755 4
Q ss_pred CCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcE
Q 027740 86 GNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 165 (219)
Q Consensus 86 Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~G 165 (219)
|-+-+ |.+. .|+..+...|+.+.+++.- .|+ +.-+..|..+|||-
T Consensus 89 GAd~v---~~p~--------~d~~v~~~ar~~g~~~i~G-v~t-----------------------~~e~~~A~~~Gad~ 133 (224)
T 1vhc_A 89 GADFV---VTPG--------LNPKIVKLCQDLNFPITPG-VNN-----------------------PMAIEIALEMGISA 133 (224)
T ss_dssp TCSEE---ECSS--------CCHHHHHHHHHTTCCEECE-ECS-----------------------HHHHHHHHHTTCCE
T ss_pred CCCEE---EECC--------CCHHHHHHHHHhCCCEEec-cCC-----------------------HHHHHHHHHCCCCE
Confidence 55433 4321 3666667777777777542 344 34457889999994
Q ss_pred EEE
Q 027740 166 VFM 168 (219)
Q Consensus 166 lvI 168 (219)
+.+
T Consensus 134 vk~ 136 (224)
T 1vhc_A 134 VKF 136 (224)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 368
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=67.05 E-value=27 Score=28.33 Aligned_cols=90 Identities=7% Similarity=-0.056 Sum_probs=51.6
Q ss_pred HHHHHHHHHhcCCCeEee-e--CCcc----cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC------
Q 027740 5 LKILEKVKIAYDIPIVTD-V--HETV----QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------ 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt-~--~d~~----~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------ 70 (219)
+.-+.+.+++.|..++.. . .+++ .++.+.+- +|.+-+.+.+... +.++.+.+.+.||++=.....
T Consensus 27 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~~~~~V 105 (290)
T 3clk_A 27 LDGIQEEAHKNGYNLIIVYSGSADPEEQKHALLTAIERPVMGILLLSIALTD-DNLQLLQSSDVPYCFLSMGFDDDRPFI 105 (290)
T ss_dssp HHHHHHHHHTTTCEEEEEC----------CHHHHHHSSCCSEEEEESCC-----CHHHHHCC--CEEEESCC--CCSCEE
T ss_pred HHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecccCCH-HHHHHHHhCCCCEEEEcCCCCCCCCEE
Confidence 456778889999887654 2 2222 23344333 7766555444333 567777778999886433210
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 106 ~~D~~~~g~~a~~~L~~~G~~~i~~i~~ 133 (290)
T 3clk_A 106 SSDDEDIGYQATNLLINEGHRQIGIAGI 133 (290)
T ss_dssp ECCHHHHHHHHHHHHHTTTCCSEEEESC
T ss_pred EeChHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 1244667888999999999988753
No 369
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=67.04 E-value=8.9 Score=28.41 Aligned_cols=63 Identities=11% Similarity=-0.029 Sum_probs=40.0
Q ss_pred HHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCC-CCCCHHHHHHHHhcCC-eEEEeCCCC
Q 027740 6 KILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAF-LCRQTDLLVAAAKTGK-IINIKKGQF 69 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~-~~~n~~LL~~~a~~gk-PVilstG~~ 69 (219)
..+++.+++.|+.+.-...+.+++..+-..+|++-.+|. +-....++++++. |+ ||+..+...
T Consensus 45 ~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-G~vPvi~~~~~~ 109 (166)
T 3qhp_A 45 KKIKLLAQKLGVKAEFGFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV-GIVPVIANSPLS 109 (166)
T ss_dssp HHHHHHHHHHTCEEECCCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT-TCCEEEECCTTC
T ss_pred HHHHHHHHHcCCeEEEeecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc-CCCcEEeeCCCC
Confidence 567788888887444322223344444444888888885 3446787877755 87 999944333
No 370
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=66.62 E-value=10 Score=31.36 Aligned_cols=88 Identities=13% Similarity=0.116 Sum_probs=51.1
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccC
Q 027740 60 KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLD 138 (219)
Q Consensus 60 kPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~ 138 (219)
+-|-++.|...+-.+....++.+.+.|..-+.+......... .-.|+..+..+++ +++||.+. .
T Consensus 17 ~~v~~~~g~~~~~~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~--~g~~~~~i~~i~~~~~iPvi~~-g------------ 81 (266)
T 2w6r_A 17 FMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTK--SGYDTEMIRFVRPLTTLPIIAS-G------------ 81 (266)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTSSCS--SCCCHHHHHHHGGGCCSCEEEE-S------------
T ss_pred EEEEEcCCeeccCCCHHHHHHHHHHCCCCEEEEEecCcccCC--CcccHHHHHHHHHhcCCCEEEE-C------------
Confidence 455566554322234455566667788877777543222111 1246778888887 79999883 2
Q ss_pred CCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 139 GGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 139 ~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
|.+. ..-...+...||+|+++=.-
T Consensus 82 -------gi~~--~~~i~~~~~~Gad~v~lg~~ 105 (266)
T 2w6r_A 82 -------GAGK--MEHFLEAFLAGADKALAASV 105 (266)
T ss_dssp -------CCCS--THHHHHHHHHTCSEEECCCC
T ss_pred -------CCCC--HHHHHHHHHcCCcHhhhhHH
Confidence 2111 12234566789999887644
No 371
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=66.61 E-value=28 Score=28.27 Aligned_cols=89 Identities=10% Similarity=-0.069 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--ccc----HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TVQ----CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~~----~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+++++.|..++....+ ++. ++.+.+. +|.+-+.+.+.. .+.++.+. .+.||++=.....
T Consensus 27 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~-~~iPvV~~~~~~~~~~~~~V 104 (285)
T 3c3k_A 27 VKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSE-LPELQNII-GAFPWVQCAEYDPLSTVSSV 104 (285)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGGG-HHHHHHHH-TTSSEEEESSCCTTSSSCEE
T ss_pred HHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHh-cCCCEEEEccccCCCCCCEE
Confidence 456778889999887654332 211 2333333 776666554433 36677777 8999876432210
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 105 ~~D~~~~g~~a~~~L~~~G~~~I~~i~~ 132 (285)
T 3c3k_A 105 SIDDVAASEYVVDQLVKSGKKRIALINH 132 (285)
T ss_dssp ECCHHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred EEChHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 1234567888999999999988753
No 372
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=66.57 E-value=44 Score=29.28 Aligned_cols=26 Identities=8% Similarity=-0.115 Sum_probs=11.5
Q ss_pred EEEeCCCCCCHHHHHHHHHHHHHcCC
Q 027740 62 INIKKGQFCASSVMVNSAEKVRLAGN 87 (219)
Q Consensus 62 VilstG~~~t~~ei~~A~e~i~~~Gn 87 (219)
|++|.+..+.+.++...++..++.|-
T Consensus 264 v~ik~~~~GGit~~~~i~~~A~~~g~ 289 (379)
T 2rdx_A 264 CCLKISNLGGLSKARRTRDFLIDNRM 289 (379)
T ss_dssp EEEETTTTTSHHHHHHHHHHHHHTTC
T ss_pred EEEeccccCCHHHHHHHHHHHHHcCC
Confidence 44444444444444444444444443
No 373
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=66.22 E-value=27 Score=29.63 Aligned_cols=125 Identities=10% Similarity=0.093 Sum_probs=68.3
Q ss_pred HHHHHHHHhc-CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCC------CCCCCCCccchh----HHHHHhc
Q 027740 49 TDLLVAAAKT-GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTM------FGYNDLIVDPRN----LEWMREA 117 (219)
Q Consensus 49 ~~LL~~~a~~-gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~------~~~~~~~~nl~~----i~~lk~~ 117 (219)
.++++.+++. +.|+.+=. .+.++++.|++ .|.+.+.+.-.+|. ...+. +=+++. +...|+.
T Consensus 61 ~e~~~~i~~~~~~~v~~l~---~n~~~i~~a~~----~G~~~V~i~~~~S~~h~~~~~~~~~-~e~~~~~~~~v~~a~~~ 132 (295)
T 1ydn_A 61 REVMAGIRRADGVRYSVLV---PNMKGYEAAAA----AHADEIAVFISASEGFSKANINCTI-AESIERLSPVIGAAIND 132 (295)
T ss_dssp HHHHHHSCCCSSSEEEEEC---SSHHHHHHHHH----TTCSEEEEEEESCHHHHHHHTSSCH-HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCEEEEEe---CCHHHHHHHHH----CCCCEEEEEEecCHHHHHHHcCCCH-HHHHHHHHHHHHHHHHc
Confidence 4556666554 55663222 26777776654 58877887765551 01111 012322 3334446
Q ss_pred CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHH
Q 027740 118 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEEL 197 (219)
Q Consensus 118 ~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~i 197 (219)
+++|...-+++.+-|.+ +.-..+++...+..+..+|++-+.|= |---.++|++..++++.+
T Consensus 133 G~~V~~~l~~~~~~e~~---------~~~~~~~~~~~~~~~~~~G~d~i~l~----------Dt~G~~~P~~~~~lv~~l 193 (295)
T 1ydn_A 133 GLAIRGYVSCVVECPYD---------GPVTPQAVASVTEQLFSLGCHEVSLG----------DTIGRGTPDTVAAMLDAV 193 (295)
T ss_dssp TCEEEEEEECSSEETTT---------EECCHHHHHHHHHHHHHHTCSEEEEE----------ETTSCCCHHHHHHHHHHH
T ss_pred CCeEEEEEEEEecCCcC---------CCCCHHHHHHHHHHHHhcCCCEEEec----------CCCCCcCHHHHHHHHHHH
Confidence 78776322322110100 00124556677788889999854443 333447899999999888
Q ss_pred HHH
Q 027740 198 VAI 200 (219)
Q Consensus 198 r~i 200 (219)
++.
T Consensus 194 ~~~ 196 (295)
T 1ydn_A 194 LAI 196 (295)
T ss_dssp HTT
T ss_pred HHh
Confidence 753
No 374
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=66.21 E-value=9.9 Score=35.43 Aligned_cols=105 Identities=9% Similarity=0.142 Sum_probs=71.5
Q ss_pred HHHHHHHHHHhcC--CCeEeeeCCcccHHHHhhh---ccccccCCCCCC-----------CHHHHHHHHhcCCeEEEe--
Q 027740 4 GLKILEKVKIAYD--IPIVTDVHETVQCEEVGKV---ADIIQIPAFLCR-----------QTDLLVAAAKTGKIINIK-- 65 (219)
Q Consensus 4 gl~~L~~~~~~~G--i~~~tt~~d~~~~~~l~~~---vd~~kI~S~~~~-----------n~~LL~~~a~~gkPVils-- 65 (219)
-+..++++.++.| +.+++-+-.++.++-+.+. .|.+-|+-+|+- +-.+++.+-+.||||+..
T Consensus 210 Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQ 289 (461)
T 3qtg_A 210 DVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQ 289 (461)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEecc
Confidence 4677788887776 8899988888887776664 677777766552 346777788889999994
Q ss_pred -------CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHH
Q 027740 66 -------KGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMR 115 (219)
Q Consensus 66 -------tG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk 115 (219)
++.- |-.|+-..+..+.. |-.-++|---+..=.|| ..++.+|.
T Consensus 290 MLeSMi~~p~P-TRAEvsDVanAV~d-GaDavMLSgETA~G~yP-----veaV~~m~ 339 (461)
T 3qtg_A 290 LLDSMQSSPIP-TRAEINDVFTTASM-GVDSLWLTNETASGKYP-----LAAVSWLS 339 (461)
T ss_dssp SSGGGGTCSSC-CHHHHHHHHHHHHT-TCSEEEECHHHHTSSCH-----HHHHHHHH
T ss_pred chHhhccCCCc-cHHHHHHHHHHHHh-CCcEEEEcccccCCCCH-----HHHHHHHH
Confidence 4444 88888888887764 56555554322221354 35555554
No 375
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=65.93 E-value=14 Score=32.73 Aligned_cols=73 Identities=18% Similarity=0.259 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCC----CCccchh---HHHHHh-c-CCCEEEcCCCCCCCCCCCccCC
Q 027740 69 FCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYND----LIVDPRN---LEWMRE-A-NCPVVADVTHSLQQPAGKKLDG 139 (219)
Q Consensus 69 ~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~----~~~nl~~---i~~lk~-~-~~pV~~ds~Hs~~~~~~~~~~~ 139 (219)
..+.+++..-++...+.|-.=|=+.=..|..+ +. +++. |. |..+++ + ++||.+|+.+
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG-~~v~~~eEl~-Rv~pvI~~l~~~~~~vpISIDT~~------------ 126 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEIT-RLVPFIEWLRGAYPDQLISVDTWR------------ 126 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC-----------CHHHHHH-HHHHHHHHHHHHSTTCEEEEECSC------------
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCC-CCCCHHHHHH-HHHHHHHHHHhhCCCCeEEEeCCC------------
Confidence 44567777777777888875332322222222 21 1121 33 444455 5 8999999766
Q ss_pred CCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 140 GGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 140 ~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+.++++|+.+||+ +|-
T Consensus 127 ------------~~VaeaAl~aGa~--iIN 142 (318)
T 2vp8_A 127 ------------AQVAKAACAAGAD--LIN 142 (318)
T ss_dssp ------------HHHHHHHHHHTCC--EEE
T ss_pred ------------HHHHHHHHHhCCC--EEE
Confidence 4667788888887 554
No 376
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=65.88 E-value=29 Score=34.80 Aligned_cols=90 Identities=21% Similarity=0.263 Sum_probs=57.6
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-----CC-----CCCccchhHHHHHh-cCCCEEEcCCC
Q 027740 59 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFG-----YN-----DLIVDPRNLEWMRE-ANCPVVADVTH 127 (219)
Q Consensus 59 gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~-----~~-----~~~~nl~~i~~lk~-~~~pV~~ds~H 127 (219)
+.|++++=+.+.+.+++..+++.+...|. +.+-++.++-.. +. +...-...+.++|+ .++||++--+-
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~-d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~ 712 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGA-DALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTP 712 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTC-SEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCC-CEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCC
Confidence 68998887544489999999999988776 566777765211 00 00111234566677 78998862111
Q ss_pred CCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEE
Q 027740 128 SLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 168 (219)
Q Consensus 128 s~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvI 168 (219)
+..+ +..++.++...|+||+.+
T Consensus 713 ------------------~~~~-~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 713 ------------------NVTD-IVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp ------------------CSSC-HHHHHHHHHHHTCSEEEE
T ss_pred ------------------ChHH-HHHHHHHHHHcCCCEEEE
Confidence 1111 256788999999998776
No 377
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=65.85 E-value=8.7 Score=30.73 Aligned_cols=80 Identities=9% Similarity=0.024 Sum_probs=52.9
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCCCHHHHHHHHhc-C--CeEEEeCCCCCCHHHHHHHHHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKT-G--KIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~-g--kPVilstG~~~t~~ei~~A~e~i 82 (219)
.+.+.++++|.+++..+++++++....+. +|++++-.......+.++++.+. + .||+..-|.. .+++....
T Consensus 92 ~~~~~~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~~~l~~~~~~~ipvia~GGI~--~~~i~~~~--- 166 (212)
T 2v82_A 92 EVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVT--PENLAQWI--- 166 (212)
T ss_dssp HHHHHHHHTTCEEECEECSHHHHHHHHHTTCSEEEETTHHHHCHHHHHHHHTTSCTTCEEEEESSCC--TTTHHHHH---
T ss_pred HHHHHHHHcCCCEEeecCCHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHHHhccCCCeEEEeCCCC--HHHHHHHH---
Confidence 35577889999888888888877766666 88888622122246777777664 3 7998888865 55555433
Q ss_pred HHcCCCcEEE
Q 027740 83 RLAGNPNVMV 92 (219)
Q Consensus 83 ~~~Gn~~i~L 92 (219)
+.|..-+++
T Consensus 167 -~~Ga~gv~v 175 (212)
T 2v82_A 167 -DAGCAGAGL 175 (212)
T ss_dssp -HHTCSEEEE
T ss_pred -HcCCCEEEE
Confidence 356554433
No 378
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=65.76 E-value=51 Score=29.10 Aligned_cols=97 Identities=12% Similarity=0.008 Sum_probs=59.6
Q ss_pred HHHHHHHh-cCC-eEEEeCCCC---------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-c
Q 027740 50 DLLVAAAK-TGK-IINIKKGQF---------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-A 117 (219)
Q Consensus 50 ~LL~~~a~-~gk-PVilstG~~---------~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~ 117 (219)
++++++-+ .|. ||.+|-... .+.+++...++.+...|..-|.+..+ +..+.+. .++..+..+|+ +
T Consensus 216 eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~-~~~~~~~--~~~~~~~~i~~~~ 292 (365)
T 2gou_A 216 EVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEV-DWDDAPD--TPVSFKRALREAY 292 (365)
T ss_dssp HHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECC-BTTBCCC--CCHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC-CcCCCCC--ccHHHHHHHHHHC
Confidence 33454433 232 999954432 26788888888888888765555433 2111111 24556777888 8
Q ss_pred CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeeec
Q 027740 118 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHD 172 (219)
Q Consensus 118 ~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH~ 172 (219)
++||+....-+ ...+..+++.| ||++++=+-+
T Consensus 293 ~iPvi~~Ggi~-----------------------~~~a~~~l~~g~aD~V~igR~~ 325 (365)
T 2gou_A 293 QGVLIYAGRYN-----------------------AEKAEQAINDGLADMIGFGRPF 325 (365)
T ss_dssp CSEEEEESSCC-----------------------HHHHHHHHHTTSCSEEECCHHH
T ss_pred CCcEEEeCCCC-----------------------HHHHHHHHHCCCcceehhcHHH
Confidence 99998742221 45667888888 9987776553
No 379
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=65.52 E-value=30 Score=30.27 Aligned_cols=83 Identities=13% Similarity=0.052 Sum_probs=52.0
Q ss_pred HHhcCCCeEeeeCCcccHHHHhhhcc--ccccCCCC-CCCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGKVAD--IIQIPAFL-CRQTDLLVAAAKTG--KIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~~vd--~~kI~S~~-~~n~~LL~~~a~~g--kPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
.+++|+.++-+|+.+.+.+.+.++-. -+.|.+.+ +++..-++.+-+.+ --|++|-...+.+.|....++..++.|
T Consensus 211 l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 290 (375)
T 1r0m_A 211 LDEYDLTYIEQPLAWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFG 290 (375)
T ss_dssp TGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTT
T ss_pred HHhCCCcEEECCCCcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcC
Confidence 46788888888887777776665521 13444443 34544444444433 357777777778888888888877776
Q ss_pred CCcEEEEee
Q 027740 87 NPNVMVCER 95 (219)
Q Consensus 87 n~~i~L~~c 95 (219)
-+ +++-|+
T Consensus 291 ~~-~~~~~~ 298 (375)
T 1r0m_A 291 AP-VWCGGM 298 (375)
T ss_dssp CC-EEECCC
T ss_pred Cc-EEecCc
Confidence 53 344443
No 380
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=65.31 E-value=8.3 Score=33.72 Aligned_cols=61 Identities=16% Similarity=0.184 Sum_probs=29.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC----CCCccchhHHHHHh---cCCCEEEcCCCC
Q 027740 67 GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN----DLIVDPRNLEWMRE---ANCPVVADVTHS 128 (219)
Q Consensus 67 G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~----~~~~nl~~i~~lk~---~~~pV~~ds~Hs 128 (219)
|.+.+.+++..-++...+.|-.=|=+.=..|..+.+ .++++ |.++.++. .++||.+|+.+.
T Consensus 46 g~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~-Rv~pvI~~l~~~~vpiSIDT~~~ 113 (294)
T 2dqw_A 46 GRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKR-RLLPVLEAVLSLGVPVSVDTRKP 113 (294)
T ss_dssp -------CCHHHHHHHHHHTCSEEEEECC-----------CCHHH-HHHHHHHHHHTTCSCEEEECSCH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHH-HHHHHHHHHHhCCCeEEEECCCH
Confidence 444466777776777777887533333323332222 13333 55666655 389999997764
No 381
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=64.85 E-value=13 Score=31.40 Aligned_cols=80 Identities=18% Similarity=0.226 Sum_probs=53.6
Q ss_pred CeEEEeCCCC---CCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-CCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCC
Q 027740 60 KIINIKKGQF---CASSVMVNSAEKVRLAGNPNVMVCERGTMFG-YNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAG 134 (219)
Q Consensus 60 kPVilstG~~---~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~-~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~ 134 (219)
..|||.||.- .|.+|+..|++.....|-. ++-..+-|. +.. ..+..+..|++ .+.+|++
T Consensus 130 lKvIiEt~~L~~~~t~eei~~a~~ia~~aGAD---fVKTSTGf~~~~g--At~edv~lm~~~v~~~v~V----------- 193 (231)
T 3ndo_A 130 LKVIVESAALLEFSGEPLLADVCRVARDAGAD---FVKTSTGFHPSGG--ASVQAVEIMARTVGERLGV----------- 193 (231)
T ss_dssp EEEECCHHHHHHHTCHHHHHHHHHHHHHTTCS---EEECCCSCCTTCS--CCHHHHHHHHHHHTTTSEE-----------
T ss_pred eEEEEECcccCCCCCHHHHHHHHHHHHHHCcC---EEEcCCCCCCCCC--CCHHHHHHHHHHhCCCceE-----------
Confidence 4678999843 2889999999999988875 334433342 332 45778888988 6656665
Q ss_pred CccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 135 KKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 135 ~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
|.+||.|.. .-+++=+.+||+
T Consensus 194 -------KaaGGIrt~--~~a~~~i~aGa~ 214 (231)
T 3ndo_A 194 -------KASGGIRTA--EQAAAMLDAGAT 214 (231)
T ss_dssp -------EEESSCCSH--HHHHHHHHTTCS
T ss_pred -------EEeCCCCCH--HHHHHHHHhcch
Confidence 223566653 445666789997
No 382
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=64.71 E-value=32 Score=27.72 Aligned_cols=90 Identities=11% Similarity=0.033 Sum_probs=58.4
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc------cHHHHhhh-ccccccCCCCCCC-HHHHHHHHhcCCeEEEeCCCCCC-----
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV------QCEEVGKV-ADIIQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFCA----- 71 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~------~~~~l~~~-vd~~kI~S~~~~n-~~LL~~~a~~gkPVilstG~~~t----- 71 (219)
+.-+.++++++|..++....+.. .++.+.+. +|.+-+.+.+... .+.++.+.+.+.||++=......
T Consensus 27 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~ 106 (293)
T 3l6u_A 27 INAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMIRSDAVVS 106 (293)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCCCCTTCSE
T ss_pred HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCCCCCccee
Confidence 45678889999998877554432 22333333 7776665554443 48889998999999875432211
Q ss_pred ------HHHHHHHHHHHHHc--CCC-----cEEEEe
Q 027740 72 ------SSVMVNSAEKVRLA--GNP-----NVMVCE 94 (219)
Q Consensus 72 ------~~ei~~A~e~i~~~--Gn~-----~i~L~~ 94 (219)
.+-...+++++.+. |.+ +|.++.
T Consensus 107 ~V~~D~~~~g~~~~~~l~~~~~g~~~~~~~~i~~i~ 142 (293)
T 3l6u_A 107 SITSNNQMIGEQLASYIKNELIKQTGRSTGRIVEIT 142 (293)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHSCSCEEEEEEE
T ss_pred EEecCHHHHHHHHHHHHHHHhccCCCCCCceEEEEE
Confidence 34556778888885 766 787775
No 383
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=64.67 E-value=53 Score=28.37 Aligned_cols=122 Identities=16% Similarity=0.213 Sum_probs=67.3
Q ss_pred ccHHHHhhh-ccccc----cCCCC------CCCHHHHHHHHhcCCeEEEeCC---CC----CCH-HHHHHHHHHHHHcCC
Q 027740 27 VQCEEVGKV-ADIIQ----IPAFL------CRQTDLLVAAAKTGKIINIKKG---QF----CAS-SVMVNSAEKVRLAGN 87 (219)
Q Consensus 27 ~~~~~l~~~-vd~~k----I~S~~------~~n~~LL~~~a~~gkPVilstG---~~----~t~-~ei~~A~e~i~~~Gn 87 (219)
.+++.+.+. +|++| +++.+ -+=..+.+++.+.|+|+++-.. .. -+. +-+..++.....-|.
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGa 191 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGA 191 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSC
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCC
Confidence 677888787 89988 77543 1112344555567999988542 22 133 556777777777776
Q ss_pred CcEEEEeecCCCCCCCCCccchh-HHHHHh-cCCC-EEEcCCCCCCCCCCCccCCCCccCCCC-cccHHHHHHHHHHcCC
Q 027740 88 PNVMVCERGTMFGYNDLIVDPRN-LEWMRE-ANCP-VVADVTHSLQQPAGKKLDGGGVASGGL-RELIPCIARTAIAVGV 163 (219)
Q Consensus 88 ~~i~L~~cgs~~~~~~~~~nl~~-i~~lk~-~~~p-V~~ds~Hs~~~~~~~~~~~~~~~~~G~-~~~~~~~~~aAvalGA 163 (219)
+++=++-+.. ++... -++.. +..... .++| |++- +|. .+-+......++..||
T Consensus 192 -D~iKv~~~~~-~~g~~-~~~~~vv~~~~~~~~~P~Vv~a--------------------GG~~~~~~~~~~~~a~~aGa 248 (304)
T 1to3_A 192 -DLYKVEMPLY-GKGAR-SDLLTASQRLNGHINMPWVILS--------------------SGVDEKLFPRAVRVAMEAGA 248 (304)
T ss_dssp -SEEEECCGGG-GCSCH-HHHHHHHHHHHHTCCSCEEECC--------------------TTSCTTTHHHHHHHHHHTTC
T ss_pred -CEEEeCCCcC-CCCCH-HHHHHHHHhccccCCCCeEEEe--------------------cCCCHHHHHHHHHHHHHcCC
Confidence 5655665321 22210 01221 221122 4788 7651 232 1222344556778899
Q ss_pred cEEEEeee
Q 027740 164 DGVFMEVH 171 (219)
Q Consensus 164 ~GlvIEkH 171 (219)
+|+++=+-
T Consensus 249 ~Gv~vGRa 256 (304)
T 1to3_A 249 SGFLAGRA 256 (304)
T ss_dssp CEEEESHH
T ss_pred eEEEEehH
Confidence 99888654
No 384
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=64.65 E-value=23 Score=38.81 Aligned_cols=113 Identities=10% Similarity=-0.061 Sum_probs=59.5
Q ss_pred ccc--cccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCc-EEEE----eecCCCCCCCCCccc
Q 027740 36 ADI--IQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPN-VMVC----ERGTMFGYNDLIVDP 108 (219)
Q Consensus 36 vd~--~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~-i~L~----~cgs~~~~~~~~~nl 108 (219)
+++ +-+++++-.--.....+.+.|.+||-.+.. +...+..+.. +...|..- |++. +||.--+. +++..
T Consensus 674 v~i~~v~~~ag~p~~~~~~~~i~~lG~~vi~~~~~--~~~a~~~~~~-~~~~g~d~~ii~~~~G~eaGGH~g~--~d~~~ 748 (2051)
T 2uv8_G 674 YPIQFLTIGAGVPSLEVASEYIETLGLKYLGLKPG--SIDAISQVIN-IAKAHPNFPIALQWTGGRGGGHHSF--EDAHT 748 (2051)
T ss_dssp CSEEEEEEESSCCCHHHHHHHHHHSCCSCEEECCC--SHHHHHHHHH-HHHHSTTSCEEEEECCSSCSEECCS--CCSSH
T ss_pred CCcceEEecCCCCchhhHHHHHHHcCCEEEEecCc--hHHHHHHHHH-HHHhCCCceeEEEEEccCcCCCCCc--ccccc
Confidence 555 666665433223344555558777764442 3555555443 44456554 3344 34432122 22333
Q ss_pred h---hHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH-----------HcCCcEEEEeeecC
Q 027740 109 R---NLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI-----------AVGVDGVFMEVHDD 173 (219)
Q Consensus 109 ~---~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv-----------alGA~GlvIEkH~t 173 (219)
. -++.++. .++||+. +. +...| .-..+|. ++||+|+.|=.-|-
T Consensus 749 ~~l~l~~~v~~~~~ipvia-aG---------------Gi~dg------~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~ 806 (2051)
T 2uv8_G 749 PMLQMYSKIRRHPNIMLIF-GS---------------GFGSA------DDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVM 806 (2051)
T ss_dssp HHHHHHHHHTTCTTBCCEE-ES---------------SCCSH------HHHTHHHHTCGGGTTTCCCCCCSCEECSGGGT
T ss_pred cHHHHHHHHHhcCCceEEE-eC---------------CCCCH------HHHHHHHccccccccCccCCCCceeeechHHH
Confidence 3 3566676 7899987 22 22123 3334666 89999999866554
Q ss_pred CC
Q 027740 174 PL 175 (219)
Q Consensus 174 ~d 175 (219)
.-
T Consensus 807 ~t 808 (2051)
T 2uv8_G 807 IA 808 (2051)
T ss_dssp TS
T ss_pred hC
Confidence 33
No 385
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=64.61 E-value=29 Score=24.29 Aligned_cols=66 Identities=15% Similarity=0.279 Sum_probs=39.3
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHH
Q 027740 78 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPC 153 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~ 153 (219)
|.+.+......+++++.... |.. --+..+..+|+ .++||++=+++. . ..
T Consensus 42 a~~~~~~~~~~dlvi~D~~~----p~~-~g~~~~~~lr~~~~~~~~pii~~s~~~-----------------~-----~~ 94 (129)
T 3h1g_A 42 AWEKLDANADTKVLITDWNM----PEM-NGLDLVKKVRSDSRFKEIPIIMITAEG-----------------G-----KA 94 (129)
T ss_dssp HHHHHHHCTTCCEEEECSCC----SSS-CHHHHHHHHHTSTTCTTCCEEEEESCC-----------------S-----HH
T ss_pred HHHHHHhCCCCCEEEEeCCC----CCC-CHHHHHHHHHhcCCCCCCeEEEEeCCC-----------------C-----hH
Confidence 44455555567898887432 210 12345556665 257888755554 2 45
Q ss_pred HHHHHHHcCCcEEEEeee
Q 027740 154 IARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 154 ~~~aAvalGA~GlvIEkH 171 (219)
....+...||++ ++-|-
T Consensus 95 ~~~~~~~~g~~~-~l~KP 111 (129)
T 3h1g_A 95 EVITALKAGVNN-YIVKP 111 (129)
T ss_dssp HHHHHHHHTCCE-EEESC
T ss_pred HHHHHHHcCccE-EEeCC
Confidence 566789999997 55553
No 386
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=64.40 E-value=9.7 Score=32.44 Aligned_cols=55 Identities=15% Similarity=0.110 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCC
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTH 127 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~H 127 (219)
+.+++..-++...+.|-. ++=+-.|+....+.+++. +.++.++. +++|+.+|+.+
T Consensus 23 ~~~~a~~~a~~~v~~GAd-iIDIg~g~~~v~~~ee~~-rvv~~i~~~~~~pisIDT~~ 78 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGAR-ALDLNVGPAVQDKVSAME-WLVEVTQEVSNLTLCLDSTN 78 (262)
T ss_dssp CHHHHHHHHHHHHHHTCS-EEEEBCC----CHHHHHH-HHHHHHHTTCCSEEEEECSC
T ss_pred CHHHHHHHHHHHHHCCCc-EEEECCCCCCCChHHHHH-HHHHHHHHhCCCeEEEeCCC
Confidence 455555555555566653 332323322111112232 55666666 57777777665
No 387
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=64.23 E-value=64 Score=27.08 Aligned_cols=86 Identities=19% Similarity=0.259 Sum_probs=54.2
Q ss_pred HHhcCCeEEEeCCCC-------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCC-CEEEcC
Q 027740 55 AAKTGKIINIKKGQF-------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANC-PVVADV 125 (219)
Q Consensus 55 ~a~~gkPVilstG~~-------~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~-pV~~ds 125 (219)
+.+.+.|+|+-.... .|.+++..+++.....|-.-|- .- | + .++..+..+++ .+. ||..-
T Consensus 134 ~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vk-t~----~--~---~~~e~~~~~~~~~~~~pV~as- 202 (263)
T 1w8s_A 134 AVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMK-IK----Y--T---GDPKTFSWAVKVAGKVPVLMS- 202 (263)
T ss_dssp HHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEE-EE----C--C---SSHHHHHHHHHHTTTSCEEEE-
T ss_pred HHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEE-Ec----C--C---CCHHHHHHHHHhCCCCeEEEE-
Confidence 335689999875331 1789999998888888875332 22 2 2 25667777776 566 98762
Q ss_pred CCCCCCCCCCccCCCCccCCCCc----ccHHHHHHHHHHcCCcEEEEee
Q 027740 126 THSLQQPAGKKLDGGGVASGGLR----ELIPCIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 126 ~Hs~~~~~~~~~~~~~~~~~G~~----~~~~~~~~aAvalGA~GlvIEk 170 (219)
||.+ +.+......++..||+|+.+=+
T Consensus 203 -------------------GGi~~~~~~~~l~~i~~~~~aGA~Gvsvgr 232 (263)
T 1w8s_A 203 -------------------GGPKTKTEEDFLKQVEGVLEAGALGIAVGR 232 (263)
T ss_dssp -------------------CCSCCSSHHHHHHHHHHHHHTTCCEEEESH
T ss_pred -------------------eCCCCCCHHHHHHHHHHHHHcCCeEEEEeh
Confidence 2332 1223345567789999977643
No 388
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=63.55 E-value=70 Score=27.34 Aligned_cols=82 Identities=12% Similarity=0.102 Sum_probs=46.7
Q ss_pred HHHHHHHHhcCCCeEeee--CCcccHHHHhhh-ccccccCCCCCCCHHHHHHH----------------HhcCCeEEE--
Q 027740 6 KILEKVKIAYDIPIVTDV--HETVQCEEVGKV-ADIIQIPAFLCRQTDLLVAA----------------AKTGKIINI-- 64 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~tt~--~d~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~----------------a~~gkPVil-- 64 (219)
+.++...+++|+.+.+++ .+++.++.+.+. ++.+.+ +-+..|..+++.+ .+.|.+|..
T Consensus 130 ~l~~~ik~~~~i~i~~s~g~~~~e~l~~L~~aG~~~i~i-~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~ 208 (350)
T 3t7v_A 130 ELVQIVKEELGLPIMISPGLMDNATLLKAREKGANFLAL-YQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGI 208 (350)
T ss_dssp HHHHHHHHHHCSCEEEECSSCCHHHHHHHHHTTEEEEEC-CCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHhhcCceEEEeCCCCCHHHHHHHHHcCCCEEEE-eeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccce
Confidence 444555556788887765 577778888887 888776 4555554444433 334444221
Q ss_pred eCCCCCCHHHHHHHHHHHHHcCCC
Q 027740 65 KKGQFCASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 65 stG~~~t~~ei~~A~e~i~~~Gn~ 88 (219)
=-|..-|.+++...++.+++-+.+
T Consensus 209 i~Glget~e~~~~~l~~l~~l~~~ 232 (350)
T 3t7v_A 209 LTGVGNDIESTILSLRGMSTNDPD 232 (350)
T ss_dssp EESSSCCHHHHHHHHHHHHHTCCS
T ss_pred EeecCCCHHHHHHHHHHHHhCCCC
Confidence 123333555665555555555443
No 389
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=63.51 E-value=65 Score=26.96 Aligned_cols=79 Identities=19% Similarity=0.184 Sum_probs=51.9
Q ss_pred cCCeE--EEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCC-CCCCccchhHHH--HHh-cCCCEEEcCCCCCCC
Q 027740 58 TGKII--NIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGY-NDLIVDPRNLEW--MRE-ANCPVVADVTHSLQQ 131 (219)
Q Consensus 58 ~gkPV--ilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~-~~~~~nl~~i~~--lk~-~~~pV~~ds~Hs~~~ 131 (219)
.|+|+ |+.|+.- +.+++..|++...+.|-. +.-..+-|.. . -.++..+.. |++ .++||-.
T Consensus 132 ~g~~lKvIlEt~~L-~~e~i~~a~ria~eaGAD---fVKTsTG~~~~~--gAt~~dv~l~~m~~~v~v~VKa-------- 197 (234)
T 1n7k_A 132 YGAVVKVILEAPLW-DDKTLSLLVDSSRRAGAD---IVKTSTGVYTKG--GDPVTVFRLASLAKPLGMGVKA-------- 197 (234)
T ss_dssp TTCEEEEECCGGGS-CHHHHHHHHHHHHHTTCS---EEESCCSSSCCC--CSHHHHHHHHHHHGGGTCEEEE--------
T ss_pred cCCeEEEEEeccCC-CHHHHHHHHHHHHHhCCC---EEEeCCCCCCCC--CCCHHHHHHHHHHHHHCCCEEE--------
Confidence 46897 9999986 999999999999998875 3333332321 2 234555666 887 5666654
Q ss_pred CCCCccCCCCccCCCCcccHHHHHHHHHHcCCc
Q 027740 132 PAGKKLDGGGVASGGLRELIPCIARTAIAVGVD 164 (219)
Q Consensus 132 ~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~ 164 (219)
+||.|.. .-++.-+.+||+
T Consensus 198 ------------aGGirt~--~~al~~i~aGa~ 216 (234)
T 1n7k_A 198 ------------SGGIRSG--IDAVLAVGAGAD 216 (234)
T ss_dssp ------------ESSCCSH--HHHHHHHHTTCS
T ss_pred ------------ecCCCCH--HHHHHHHHcCcc
Confidence 2465542 334455689997
No 390
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=63.31 E-value=13 Score=34.41 Aligned_cols=62 Identities=23% Similarity=0.313 Sum_probs=45.1
Q ss_pred CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCC-CCCCCCChHHHHHHHHH
Q 027740 118 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPV-DGPTQWPLRNLEELLEE 196 (219)
Q Consensus 118 ~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~-D~~~sl~p~el~~lv~~ 196 (219)
++.|++|+-|.. ++ ..+...--.+|++ +++.|..||-..+ .++-...|+.|+.+.+.
T Consensus 194 ~lkIvvD~~~Ga---------------~~-----~~~~~il~~lG~~--v~~~~~~pDg~Fp~~~p~P~~~~~l~~l~~~ 251 (485)
T 3uw2_A 194 PLKLVVDAGNGV---------------AG-----PLATRLFKALGCE--LVELFTDIDGNFPNHHPDPAHPENLQDVIAK 251 (485)
T ss_dssp CCCEEEECTTST---------------HH-----HHHHHHHHHTTCC--EEEESCSCCTTCCSSCSCTTSGGGGHHHHHH
T ss_pred CCEEEEEcCCCc---------------HH-----HHHHHHHHHcCCe--EEEecCccCCCCCCCCcCCCCHHHHHHHHHH
Confidence 588999999985 23 4455566789998 8888999998876 45555567778777776
Q ss_pred HHHHH
Q 027740 197 LVAIA 201 (219)
Q Consensus 197 ir~i~ 201 (219)
+++..
T Consensus 252 v~~~~ 256 (485)
T 3uw2_A 252 LKATD 256 (485)
T ss_dssp HHHSS
T ss_pred HHhhC
Confidence 66543
No 391
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=63.26 E-value=9.1 Score=31.60 Aligned_cols=47 Identities=15% Similarity=0.168 Sum_probs=36.5
Q ss_pred CHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC
Q 027740 48 QTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF 99 (219)
Q Consensus 48 n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~ 99 (219)
-.++++.+++.|+||++-.+.. .+.++.. .+.+.. -++++.|||...
T Consensus 126 ~~~~~~~a~~~~lpv~iH~~~~-~~~~~~~---~~~~~p-l~~vi~H~g~~~ 172 (288)
T 2ffi_A 126 WRPLLERIGEQGWHVELHRQVA-DIPVLVR---ALQPYG-LDIVIDHFGRPD 172 (288)
T ss_dssp THHHHHHHHHHTCEEEECSCTT-THHHHHH---HHTTTT-CCEEESGGGSCC
T ss_pred HHHHHHHHHHCCCeEEEeechh-hHHHHHH---HHHHCC-CCEEEECCCCCC
Confidence 3789999999999999988876 6666544 444455 679999999853
No 392
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=63.25 E-value=87 Score=29.60 Aligned_cols=91 Identities=9% Similarity=-0.008 Sum_probs=56.5
Q ss_pred CCeEEEeCC------CCCCHHHHHHHHHHHHHcCCCcEEEEeecCC----C-C-CCCCCccchhHHHHHh-cCCCEEEcC
Q 027740 59 GKIINIKKG------QFCASSVMVNSAEKVRLAGNPNVMVCERGTM----F-G-YNDLIVDPRNLEWMRE-ANCPVVADV 125 (219)
Q Consensus 59 gkPVilstG------~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~----~-~-~~~~~~nl~~i~~lk~-~~~pV~~ds 125 (219)
..||.++-+ .+.+.+|....++.+.. |. +++=++.++. . + +.....++..+..+|+ .++||+...
T Consensus 224 ~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~-d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G 301 (690)
T 3k30_A 224 RAAVACRITVEEEIDGGITREDIEGVLRELGE-LP-DLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVG 301 (690)
T ss_dssp SSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SS-SEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECS
T ss_pred CceEEEEECccccCCCCCCHHHHHHHHHHHHh-hc-CEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeC
Confidence 569999862 12368888888887765 53 5655665531 0 0 1112234455556677 789998743
Q ss_pred CCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeeecC
Q 027740 126 THSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVHDD 173 (219)
Q Consensus 126 ~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH~t 173 (219)
+-. . +..+..+++.| ||++++=+.+-
T Consensus 302 ~i~-----------------~-----~~~a~~~l~~g~~d~v~~gR~~~ 328 (690)
T 3k30_A 302 RFT-----------------S-----PDAMVRQIKAGILDLIGAARPSI 328 (690)
T ss_dssp CCC-----------------C-----HHHHHHHHHTTSCSEEEESHHHH
T ss_pred CCC-----------------C-----HHHHHHHHHCCCcceEEEcHHhH
Confidence 322 1 56677888887 99888876653
No 393
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=63.14 E-value=20 Score=31.72 Aligned_cols=30 Identities=7% Similarity=-0.001 Sum_probs=16.0
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A 78 (219)
|.+.++++.+ ++.||..-=... |.+++...
T Consensus 238 ~~~~~~~l~~~~~ipIa~dE~~~-~~~~~~~~ 268 (392)
T 2poz_A 238 DNGALKVISEQIPLPIAVGERVY-TRFGFRKI 268 (392)
T ss_dssp CHHHHHHHHHHCSSCEEECTTCC-HHHHHHHH
T ss_pred cHHHHHHHHhhCCCCEEecCCcC-CHHHHHHH
Confidence 5555555543 466766554444 55554443
No 394
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=62.91 E-value=20 Score=31.87 Aligned_cols=29 Identities=3% Similarity=-0.123 Sum_probs=14.5
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~ 77 (219)
|.+.++++.+ ++.||..-=... +.+++..
T Consensus 254 ~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~ 283 (407)
T 2o56_A 254 NPAQMKQVADKVNIPLAAGERIY-WRWGYRP 283 (407)
T ss_dssp SHHHHHHHHHHCCSCEEECTTCC-HHHHHHH
T ss_pred hHHHHHHHHHhCCCCEEeCCCcC-CHHHHHH
Confidence 4555555543 456666544433 4544443
No 395
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=62.86 E-value=19 Score=33.29 Aligned_cols=74 Identities=14% Similarity=0.124 Sum_probs=51.1
Q ss_pred HHHHHHHHhc-C-CCeEe-eeCCcccHHHHhhh-ccccccCCCC---C----------CCHHHHHHHHh----c------
Q 027740 6 KILEKVKIAY-D-IPIVT-DVHETVQCEEVGKV-ADIIQIPAFL---C----------RQTDLLVAAAK----T------ 58 (219)
Q Consensus 6 ~~L~~~~~~~-G-i~~~t-t~~d~~~~~~l~~~-vd~~kI~S~~---~----------~n~~LL~~~a~----~------ 58 (219)
..+...++.+ + ++++. ++.+.+++..+.+. +|++++|..- + -+...+..+++ .
T Consensus 272 ~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~ 351 (503)
T 1me8_A 272 ITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGI 351 (503)
T ss_dssp HHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSE
T ss_pred hHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCC
Confidence 3444444554 4 77764 89999999999988 9999875421 1 12233334432 2
Q ss_pred CCeEEEeCCCCCCHHHHHHHHH
Q 027740 59 GKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 59 gkPVilstG~~~t~~ei~~A~e 80 (219)
+.|||.+=|.. +..|+..|+.
T Consensus 352 ~ipvia~GGi~-~~~di~kAla 372 (503)
T 1me8_A 352 YIPVCSDGGIV-YDYHMTLALA 372 (503)
T ss_dssp ECCEEEESCCC-SHHHHHHHHH
T ss_pred CceEEEeCCCC-CHHHHHHHHH
Confidence 79999999999 9999998865
No 396
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=62.85 E-value=14 Score=32.33 Aligned_cols=30 Identities=20% Similarity=0.145 Sum_probs=15.7
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A 78 (219)
|.+.++++.+ ++.||..-=... +.+++...
T Consensus 225 d~~~~~~l~~~~~iPI~~dE~~~-~~~~~~~~ 255 (369)
T 2p8b_A 225 DIDAMAHIRSKTDLPLMIDEGLK-SSREMRQI 255 (369)
T ss_dssp CHHHHHHHHHTCCSCEEESTTCC-SHHHHHHH
T ss_pred cHHHHHHHHHhCCCCEEeCCCCC-CHHHHHHH
Confidence 4555555543 456666554443 55555544
No 397
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=62.82 E-value=39 Score=28.08 Aligned_cols=90 Identities=9% Similarity=0.064 Sum_probs=56.2
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc---cHHHHhh---h-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV---QCEEVGK---V-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~---~~~~l~~---~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+++++.|..++....+.. +.+.+.. . +|.+-+.+.+.. .+.++.+.+.+.||++=.....
T Consensus 79 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~~~~~~~~~V 157 (332)
T 2hsg_A 79 ARGIEDIATMYKYNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVT-EEHVEELKKSPVPVVLAASIESTNQIPSV 157 (332)
T ss_dssp HHHHHHHHHHHTCEEEEEECCSHHHHHHHHHHHTSCCSSCCEEECCSSCC-HHHHHHHTTSSSCEEEESCCCSCTTSCEE
T ss_pred HHHHHHHHHHcCCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHhCCCCEEEEccccCCCCCCEE
Confidence 45677888899987765433321 1223333 2 666655554433 4678888788999876433210
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
...-...+++++.+.|..+|.++..
T Consensus 158 ~~D~~~~~~~a~~~L~~~G~~~I~~i~~ 185 (332)
T 2hsg_A 158 TIDYEQAAFDAVQSLIDSGHKNIAFVSG 185 (332)
T ss_dssp EECHHHHHHHHHHHHHTTTCSCEEEEES
T ss_pred EEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 1234567888999999999988753
No 398
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=62.72 E-value=7.9 Score=33.26 Aligned_cols=77 Identities=17% Similarity=0.134 Sum_probs=51.0
Q ss_pred HHhcCCCeEeeeCCcccHHHHhhh-ccccccC-----------------------------CC--------CCCCHHHHH
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGKV-ADIIQIP-----------------------------AF--------LCRQTDLLV 53 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~-----------------------------S~--------~~~n~~LL~ 53 (219)
++++|++++.++.+...+....+. +|++.+. .. .-.+.++++
T Consensus 121 ~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~ 200 (305)
T 2nv1_A 121 KNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLL 200 (305)
T ss_dssp GGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHH
T ss_pred HhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHH
Confidence 346788888888887665555455 7777661 11 124678888
Q ss_pred HHHh-cCCeEE--EeCCCCCCHHHHHHHHHHHHHcCCCcEEEE
Q 027740 54 AAAK-TGKIIN--IKKGQFCASSVMVNSAEKVRLAGNPNVMVC 93 (219)
Q Consensus 54 ~~a~-~gkPVi--lstG~~~t~~ei~~A~e~i~~~Gn~~i~L~ 93 (219)
++.+ .+.||+ ..-|.. |.+++..+. ..|..-+++.
T Consensus 201 ~i~~~~~iPvi~~a~GGI~-~~~d~~~~~----~~GadgV~vG 238 (305)
T 2nv1_A 201 QIKKDGKLPVVNFAAGGVA-TPADAALMM----QLGADGVFVG 238 (305)
T ss_dssp HHHHHTSCSSCEEBCSCCC-SHHHHHHHH----HTTCSCEEEC
T ss_pred HHHHhcCCCEEEEeccCCC-CHHHHHHHH----HcCCCEEEEc
Confidence 8877 578998 777776 898876554 3576545444
No 399
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=62.66 E-value=24 Score=24.51 Aligned_cols=82 Identities=11% Similarity=0.146 Sum_probs=47.7
Q ss_pred HHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCC
Q 027740 54 AAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQP 132 (219)
Q Consensus 54 ~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~ 132 (219)
.+.+.|.-|... . +.+|... .+. ...++++++.... |.. --+..+..+|+ .++||++=+++.
T Consensus 21 ~L~~~g~~v~~~---~-~~~~al~---~~~-~~~~dlii~D~~~----p~~-~g~~~~~~lr~~~~~~ii~~t~~~---- 83 (120)
T 3f6p_A 21 NLRKEGYEVHCA---H-DGNEAVE---MVE-ELQPDLILLDIML----PNK-DGVEVCREVRKKYDMPIIMLTAKD---- 83 (120)
T ss_dssp HHHHTTCEEEEE---S-SHHHHHH---HHH-TTCCSEEEEETTS----TTT-HHHHHHHHHHTTCCSCEEEEEESS----
T ss_pred HHHhCCEEEEEe---C-CHHHHHH---HHh-hCCCCEEEEeCCC----CCC-CHHHHHHHHHhcCCCCEEEEECCC----
Confidence 344456555431 2 5555444 343 4568999998532 210 12344556666 678988745554
Q ss_pred CCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 133 AGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 133 ~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
. ......+...||++ +|.|-
T Consensus 84 -------------~-----~~~~~~~~~~ga~~-~l~KP 103 (120)
T 3f6p_A 84 -------------S-----EIDKVIGLEIGADD-YVTKP 103 (120)
T ss_dssp -------------C-----HHHHHHHHHTTCCE-EEEES
T ss_pred -------------C-----hHHHHHHHhCCcce-eEcCC
Confidence 2 44556789999997 66664
No 400
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=62.44 E-value=51 Score=28.85 Aligned_cols=86 Identities=12% Similarity=0.078 Sum_probs=56.5
Q ss_pred HHHHHHHHHhcCCCeEe--ee-CCc-----cc---HHHHhhh-ccccccCCCCC--------------CCHHHHHHHHhc
Q 027740 5 LKILEKVKIAYDIPIVT--DV-HET-----VQ---CEEVGKV-ADIIQIPAFLC--------------RQTDLLVAAAKT 58 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t--t~-~d~-----~~---~~~l~~~-vd~~kI~S~~~--------------~n~~LL~~~a~~ 58 (219)
.+++..+.+..++++.. .+ ++. .. ++.+.+. +|++.|-++.. .++++++.+.+.
T Consensus 115 ~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~ 194 (350)
T 3b0p_A 115 REILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD 194 (350)
T ss_dssp HHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh
Confidence 44566666667888877 21 221 11 2344555 88888876542 268888888774
Q ss_pred --CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 027740 59 --GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT 97 (219)
Q Consensus 59 --gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs 97 (219)
+.||+..-|.. |.+++..+++ |. +.+.+=|+.
T Consensus 195 ~~~iPVianGgI~-s~eda~~~l~-----Ga-D~V~iGRa~ 228 (350)
T 3b0p_A 195 FPQLTFVTNGGIR-SLEEALFHLK-----RV-DGVMLGRAV 228 (350)
T ss_dssp CTTSEEEEESSCC-SHHHHHHHHT-----TS-SEEEECHHH
T ss_pred CCCCeEEEECCcC-CHHHHHHHHh-----CC-CEEEECHHH
Confidence 79999999988 9999887653 64 455555543
No 401
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=62.43 E-value=66 Score=28.30 Aligned_cols=79 Identities=18% Similarity=0.104 Sum_probs=54.8
Q ss_pred cccCCCCCC-CHHHHHHHHhc---CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHH
Q 027740 39 IQIPAFLCR-QTDLLVAAAKT---GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM 114 (219)
Q Consensus 39 ~kI~S~~~~-n~~LL~~~a~~---gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~l 114 (219)
+|+|..+.. ....++++-+. +.++.+.-..+-+.++....++.+...| +..+|. |.+. -|+..+..+
T Consensus 170 ~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~---i~~iEq----P~~~--~d~~~~~~l 240 (383)
T 3i4k_A 170 LKMGAGDPAEDTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAG---VELFEQ----PTPA--DDLETLREI 240 (383)
T ss_dssp EECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTT---CCEEES----CSCT--TCHHHHHHH
T ss_pred EeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcC---CCEEEC----CCCh--hhHHHHHHH
Confidence 456664433 45666666553 5799999888889999888888887765 556664 3332 267778888
Q ss_pred Hh-cCCCEEEcCC
Q 027740 115 RE-ANCPVVADVT 126 (219)
Q Consensus 115 k~-~~~pV~~ds~ 126 (219)
++ .++||..|=+
T Consensus 241 ~~~~~iPIa~dE~ 253 (383)
T 3i4k_A 241 TRRTNVSVMADES 253 (383)
T ss_dssp HHHHCCEEEESTT
T ss_pred HhhCCCCEEecCc
Confidence 87 8899987533
No 402
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=62.21 E-value=61 Score=26.20 Aligned_cols=90 Identities=21% Similarity=0.096 Sum_probs=60.3
Q ss_pred HHHHHHHHHhcCCCeEe-ee--CCcc----cHHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCCeEEEeCCCCC-----
Q 027740 5 LKILEKVKIAYDIPIVT-DV--HETV----QCEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQFC----- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t-t~--~d~~----~~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gkPVilstG~~~----- 70 (219)
+.-+.+.++++|..++. .. .|++ .++.+.+. +|.+-+.+.+.. ..+.++.+.+.|.||++-.....
T Consensus 23 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 102 (305)
T 3g1w_A 23 LKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGAPDSHAH 102 (305)
T ss_dssp HHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCTTSCCS
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCCCCCcee
Confidence 56678889999998876 22 2322 12333333 787776665554 57889999999999987443211
Q ss_pred ------CHHHHHHHHHHHHHc--CCCcEEEEe
Q 027740 71 ------ASSVMVNSAEKVRLA--GNPNVMVCE 94 (219)
Q Consensus 71 ------t~~ei~~A~e~i~~~--Gn~~i~L~~ 94 (219)
..+-...+++++.+. |..+|.++.
T Consensus 103 ~~V~~d~~~~g~~~~~~l~~~~~g~~~i~~i~ 134 (305)
T 3g1w_A 103 SFLGTNNYNAGMNAAYKMAELLDGEGEVAVIT 134 (305)
T ss_dssp CEEECCHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred EEECcCHHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 123456788889888 999988876
No 403
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=61.97 E-value=24 Score=30.28 Aligned_cols=17 Identities=6% Similarity=-0.121 Sum_probs=8.6
Q ss_pred CCeEEEeCCCCCCHHHHH
Q 027740 59 GKIINIKKGQFCASSVMV 76 (219)
Q Consensus 59 gkPVilstG~~~t~~ei~ 76 (219)
+.||++--|.+ |.+++.
T Consensus 208 ~~Pv~vGfGIs-t~e~~~ 224 (271)
T 3nav_A 208 APPALLGFGIS-EPAQVK 224 (271)
T ss_dssp CCCEEECSSCC-SHHHHH
T ss_pred CCCEEEECCCC-CHHHHH
Confidence 44555555554 555544
No 404
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=61.90 E-value=6 Score=33.43 Aligned_cols=133 Identities=17% Similarity=0.186 Sum_probs=0.0
Q ss_pred ChhHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCCCC-CHHHH-----HHH-------HhcC------C
Q 027740 1 MVEGLKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFLCR-QTDLL-----VAA-------AKTG------K 60 (219)
Q Consensus 1 ~~~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~-n~~LL-----~~~-------a~~g------k 60 (219)
+++-++.+++..+ .++|++-.+.....+ +. +|.+-|++=-.. +.+++ +.+ .+.| .
T Consensus 47 ~~~~~~~v~~ir~-~~~Pivl~~y~~n~i----~~gvDg~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~ 121 (234)
T 2f6u_A 47 YEKARTLIEKVSQ-YGLPIVVEPSDPSNV----VYDVDYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEF 121 (234)
T ss_dssp HHHHHHHHHHHTT-SCCCEEECCSSCCCC----CCCSSEEEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcC-CCCCEEEecCCcchh----hcCCCEEEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCccccee
Q ss_pred eEE--------------EeCCCCCCHHHHHHHHHHHHHcCCCcE--EEEeecCCCCCCCCCccchhHHHHHh-c-CCCEE
Q 027740 61 IIN--------------IKKGQFCASSVMVNSAEKVRLAGNPNV--MVCERGTMFGYNDLIVDPRNLEWMRE-A-NCPVV 122 (219)
Q Consensus 61 PVi--------------lstG~~~t~~ei~~A~e~i~~~Gn~~i--~L~~cgs~~~~~~~~~nl~~i~~lk~-~-~~pV~ 122 (219)
+|. +..|.. +.++ +-+..+.+.|.+.+ .++-+.+ .+.+. |...+..+++ . ++||.
T Consensus 122 ~I~~gYil~~P~~~~~rl~~g~~-~~~~--e~~~~~a~~g~~~l~~~~Vyl~~-~G~~~---~~~~i~~i~~~~~~~Pv~ 194 (234)
T 2f6u_A 122 IQIEGYIVLNPDSAVARVTKALC-NIDK--ELAASYALVGEKLFNLPIIYIEY-SGTYG---NPELVAEVKKVLDKARLF 194 (234)
T ss_dssp EEEEEEEECCTTSHHHHHTTBCC-CCCH--HHHHHHHHHHHHTTCCSEEEEEC-TTSCC---CHHHHHHHHHHCSSSEEE
T ss_pred eeecceEEECCCCceEEeecCCC-CCCH--HHHHHHHHhhhhhcCCCEEEEeC-CCCcc---hHHHHHHHHHhCCCCCEE
Q ss_pred EcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEE
Q 027740 123 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 168 (219)
Q Consensus 123 ~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvI 168 (219)
+ |..... +..+..... ||||+++
T Consensus 195 v-----------------GgGI~s-----~e~a~~~~~-gAd~VIV 217 (234)
T 2f6u_A 195 Y-----------------GGGIDS-----REKAREMLR-YADTIIV 217 (234)
T ss_dssp E-----------------ESCCCS-----HHHHHHHHH-HSSEEEE
T ss_pred E-----------------EecCCC-----HHHHHHHHh-CCCEEEE
No 405
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=61.84 E-value=17 Score=33.37 Aligned_cols=57 Identities=18% Similarity=0.190 Sum_probs=40.0
Q ss_pred CCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCC-CCCCCCChHHHHHHHHH
Q 027740 118 NCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPV-DGPTQWPLRNLEELLEE 196 (219)
Q Consensus 118 ~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~-D~~~sl~p~el~~lv~~ 196 (219)
++.|++|+-|.. ++ ..+...--.+|++ ++..+..||-..+ .++-+..|+++++++++
T Consensus 194 ~lkivvD~~nG~---------------~~-----~~~~~ll~~lG~~--v~~l~~~pDg~f~n~~~~~~~~~~l~~~v~~ 251 (469)
T 3pdk_A 194 GLHIALDCAHGA---------------TS-----SLAPYLFADLEAD--ISTMGTSPNGMNINDGVGSTHPEVLAELVKE 251 (469)
T ss_dssp TCEEEEECTTST---------------TT-----THHHHHHHHTTCE--EEEESCCCCSSCTTSSCSTTSTHHHHHHHHH
T ss_pred CCEEEEECCCch---------------HH-----HHHHHHHHHcCCE--EEEECCCcCCCCCCCCCCCCCHHHHHHHHHh
Confidence 578999999985 23 3445556789998 7788888887665 34455677777766543
No 406
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=61.78 E-value=74 Score=26.96 Aligned_cols=159 Identities=14% Similarity=0.103 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhcCCCeEeee-CCc-------ccHHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCCe-EEEeCCCCCCH
Q 027740 4 GLKILEKVKIAYDIPIVTDV-HET-------VQCEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGKI-INIKKGQFCAS 72 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~-~d~-------~~~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gkP-VilstG~~~t~ 72 (219)
.+..+++.+++..+|++--. +++ .-++.+.+. +|.+-++.-... -..+.+.+-+.|.+ |.|-+..+ +.
T Consensus 79 ~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s-~~ 157 (271)
T 1ujp_A 79 ALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTS-TD 157 (271)
T ss_dssp HHHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTC-CH
T ss_pred HHHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCC-CH
Confidence 46778888887888888732 121 112223333 665555533323 56777777778865 54555544 56
Q ss_pred HHHHHHHHHHHHcCCCcEEEEeecCCC-CCCCC-Ccc-chhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCc
Q 027740 73 SVMVNSAEKVRLAGNPNVMVCERGTMF-GYNDL-IVD-PRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLR 148 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~i~L~~cgs~~-~~~~~-~~n-l~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~ 148 (219)
+.+... .+.+.. .+.+-..+-+ +.... ..+ ..-+..+|+ .++||.+- +|.+
T Consensus 158 eri~~i----a~~~~g-fiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vG--------------------fGI~ 212 (271)
T 1ujp_A 158 ARIATV----VRHATG-FVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVG--------------------FGVS 212 (271)
T ss_dssp HHHHHH----HTTCCS-CEEEECC------------CCHHHHHHHHTTCCSCEEEE--------------------SCCC
T ss_pred HHHHHH----HHhCCC-CEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEE--------------------cCCC
Confidence 544443 233333 3333221111 22211 112 356677888 78998772 1211
Q ss_pred ccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 149 ELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 149 ~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
. +..+.. + .||||+++=+.++=... .+ +.++++++.+++.
T Consensus 213 t--~e~a~~-~-~~ADgVIVGSAi~~~~~-~~-------~~~~~fv~~l~~~ 252 (271)
T 1ujp_A 213 G--KATAAQ-A-AVADGVVVGSALVRALE-EG-------RSLAPLLQEIRQG 252 (271)
T ss_dssp S--HHHHHH-H-TTSSEEEECHHHHHHHH-TT-------CCHHHHHHHHHHH
T ss_pred C--HHHHHH-h-cCCCEEEEChHHhcccc-hH-------HHHHHHHHHHHHH
Confidence 0 233333 4 99999998765441110 01 3688888887654
No 407
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=61.59 E-value=26 Score=29.16 Aligned_cols=64 Identities=9% Similarity=0.073 Sum_probs=40.3
Q ss_pred HHHHHHhcCCeEEEeCCC-CCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEc
Q 027740 51 LLVAAAKTGKIINIKKGQ-FCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 124 (219)
Q Consensus 51 LL~~~a~~gkPVilstG~-~~t~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~d 124 (219)
.++.+.++|+||++-+|. .-.. ...++.+++.|.+ .+++.||.+. -+...+..+.+.++-|+++
T Consensus 156 ~~~lA~~~~~pv~iH~~~~~~~~---~~~~~~l~~~~~~~~~~~i~H~~~~-------~~~~~~~~~~~~G~~i~~~ 222 (314)
T 2vc7_A 156 AAIANKETKVPIITHSNAHNNTG---LEQQRILTEEGVDPGKILIGHLGDT-------DNIDYIKKIADKGSFIGLD 222 (314)
T ss_dssp HHHHHHHHCCCEEEECCTTTTHH---HHHHHHHHHTTCCGGGEEETTGGGC-------CCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHCCEEEEeCCCcccCh---HHHHHHHHHcCCCcccEEEECCCCC-------CCHHHHHHHHHcCCEEEEe
Confidence 445566789999998872 1122 3455667776765 6799999752 1234444444467778885
No 408
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=61.43 E-value=49 Score=29.18 Aligned_cols=76 Identities=11% Similarity=0.068 Sum_probs=33.5
Q ss_pred HHHhcCCCeEeeeCCcccHHHHhhhcc--ccccCCC-CCCCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHHHHHHHHHc
Q 027740 11 VKIAYDIPIVTDVHETVQCEEVGKVAD--IIQIPAF-LCRQTDLLVAAAKTG--KIINIKKGQFCASSVMVNSAEKVRLA 85 (219)
Q Consensus 11 ~~~~~Gi~~~tt~~d~~~~~~l~~~vd--~~kI~S~-~~~n~~LL~~~a~~g--kPVilstG~~~t~~ei~~A~e~i~~~ 85 (219)
..+++|+.++-+|+.+.+.+.++++-. -+.|.+. .+.+..-++.+-+.+ --|++|.+..+.+.++...+...++.
T Consensus 216 ~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~ 295 (383)
T 3i4k_A 216 ILAEAGVELFEQPTPADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAG 295 (383)
T ss_dssp HHHHTTCCEEESCSCTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHT
T ss_pred HHHhcCCCEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHc
Confidence 335566666666666555555444311 1222222 223332222222222 23455555444555555555555544
Q ss_pred C
Q 027740 86 G 86 (219)
Q Consensus 86 G 86 (219)
|
T Consensus 296 g 296 (383)
T 3i4k_A 296 G 296 (383)
T ss_dssp T
T ss_pred C
Confidence 4
No 409
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=61.35 E-value=60 Score=28.63 Aligned_cols=94 Identities=15% Similarity=0.096 Sum_probs=58.0
Q ss_pred HHHHHh-cC-CeEEEeCCCC----------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cC
Q 027740 52 LVAAAK-TG-KIINIKKGQF----------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN 118 (219)
Q Consensus 52 L~~~a~-~g-kPVilstG~~----------~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~ 118 (219)
++++-+ .| .||.+|-... .++++....++.+...|..-|.+..++. .+.+. .++..+..+|+ ++
T Consensus 218 v~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~-~~~~~--~~~~~~~~v~~~~~ 294 (364)
T 1vyr_A 218 VDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDL-AGGKP--YSEAFRQKVRERFH 294 (364)
T ss_dssp HHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBT-TBCCC--CCHHHHHHHHHHCC
T ss_pred HHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcc-cCCCc--ccHHHHHHHHHHCC
Confidence 444433 23 2999943322 1567777888888888876555543321 11121 34566777888 89
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEEeee
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFMEVH 171 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvIEkH 171 (219)
+||+....-+ ...+..+++.| ||++++=+-
T Consensus 295 iPvi~~Ggit-----------------------~~~a~~~l~~g~aD~V~~gR~ 325 (364)
T 1vyr_A 295 GVIIGAGAYT-----------------------AEKAEDLIGKGLIDAVAFGRD 325 (364)
T ss_dssp SEEEEESSCC-----------------------HHHHHHHHHTTSCSEEEESHH
T ss_pred CCEEEECCcC-----------------------HHHHHHHHHCCCccEEEECHH
Confidence 9998742221 45667788888 998887655
No 410
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=61.23 E-value=19 Score=31.95 Aligned_cols=42 Identities=12% Similarity=-0.012 Sum_probs=22.9
Q ss_pred CCHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEE
Q 027740 47 RQTDLLVAAAK-TGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVC 93 (219)
Q Consensus 47 ~n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~ 93 (219)
.|.+.++++.+ ++.||..-=... +.+++...++ .|.-+++.+
T Consensus 256 ~~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i~----~~~~d~v~i 298 (410)
T 2gl5_A 256 LNSDNMQKVSRSTTIPIATGERSY-TRWGYRELLE----KQSIAVAQP 298 (410)
T ss_dssp SCHHHHHHHHHHCSSCEEECTTCC-TTHHHHHHHH----TTCCSEECC
T ss_pred hhHHHHHHHHhhCCCCEEecCCcC-CHHHHHHHHH----cCCCCEEec
Confidence 35666665554 567777655555 6666555432 344445443
No 411
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=61.20 E-value=27 Score=30.45 Aligned_cols=88 Identities=8% Similarity=-0.049 Sum_probs=55.1
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--cccHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEe-CCCCC----------
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TVQCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIK-KGQFC---------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVils-tG~~~---------- 70 (219)
+.-+.+++++.|..+.....+ .+.++.+.+. +|.+-+. ..+.++++.+.+.|.||++= +....
T Consensus 43 ~~gi~~~a~~~g~~~~i~~~~~~~~~i~~l~~~~vDGiIi~---~~~~~~~~~l~~~~iPvV~i~~~~~~~~~~~~~~~V 119 (412)
T 4fe7_A 43 VEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIAD---FDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYI 119 (412)
T ss_dssp HHHHHHHHHHHTCCEEEEECC-CC--------CCCSEEEEE---TTCHHHHHHHTTCCSCEEEEEECCSSGGGSCSSEEE
T ss_pred HHHHHHHHHhcCCCeEEEecCCccchhhhHhcCCCCEEEEe---cCChHHHHHHhhCCCCEEEecCCccccccCCCCCEE
Confidence 456778888888876654332 2234455444 7777662 34678888888999998753 22110
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
...-...|++++.+.|..+|.++-.
T Consensus 120 ~~D~~~~g~~a~~~L~~~G~r~I~~i~~ 147 (412)
T 4fe7_A 120 ATDNYALVESAFLHLKEKGVNRFAFYGL 147 (412)
T ss_dssp EECHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EeCHHHHHHHHHHHHHHcCCceEEEecc
Confidence 2355667889999999999988753
No 412
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=61.13 E-value=44 Score=27.34 Aligned_cols=78 Identities=13% Similarity=0.078 Sum_probs=47.0
Q ss_pred HHHHHHHHHhcCCCeEeee------CCcccH----HHHhhh-ccccccCCCCC---CCHHHHHHHHhc---CCeEEEeCC
Q 027740 5 LKILEKVKIAYDIPIVTDV------HETVQC----EEVGKV-ADIIQIPAFLC---RQTDLLVAAAKT---GKIINIKKG 67 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~------~d~~~~----~~l~~~-vd~~kI~S~~~---~n~~LL~~~a~~---gkPVilstG 67 (219)
++.++++++..+ ++..-+ ++.+++ +.+.+. +|++++..+-- .+.+.++.+.+. ..||+.+=|
T Consensus 105 ~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GG 183 (225)
T 1mzh_A 105 VEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGG 183 (225)
T ss_dssp HHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESS
T ss_pred HHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECC
Confidence 345666666665 544332 454443 334445 88898775321 145556555543 689999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCC
Q 027740 68 QFCASSVMVNSAEKVRLAGNP 88 (219)
Q Consensus 68 ~~~t~~ei~~A~e~i~~~Gn~ 88 (219)
.. |.+++...+ . .|..
T Consensus 184 I~-t~~da~~~l---~-aGA~ 199 (225)
T 1mzh_A 184 IR-DLETAISMI---E-AGAD 199 (225)
T ss_dssp CC-SHHHHHHHH---H-TTCS
T ss_pred CC-CHHHHHHHH---H-hCch
Confidence 99 877666554 3 5765
No 413
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=61.09 E-value=7.1 Score=34.40 Aligned_cols=72 Identities=19% Similarity=0.167 Sum_probs=45.1
Q ss_pred hHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCC--CC--C------
Q 027740 110 NLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPL--NA--P------ 178 (219)
Q Consensus 110 ~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d--~a--~------ 178 (219)
-+..+|+ +++|+++ ..|-. .|. -..-+.+|+..||+ .|+.-...= ++ .
T Consensus 177 lv~~l~~~~~~~i~~-H~Hn~---------------~G~---a~an~laA~~aGa~--~vd~si~GlG~~~GN~~~E~lv 235 (320)
T 3dxi_A 177 LLKEVRKYTHVPVGF-HGHDN---------------LQL---GLINSITAIDDGID--FIDATITGMGRGAGNLKMELLL 235 (320)
T ss_dssp HHHHHHHHCCSCEEE-ECBCT---------------TSC---HHHHHHHHHHTTCS--EEEEBGGGCSSTTCBCBHHHHH
T ss_pred HHHHHHHhCCCeEEE-EeCCC---------------Ccc---HHHHHHHHHHhCCC--EEEEeccccCCcccchhHHHHH
Confidence 3566777 8899998 78863 242 25567899999999 888765432 11 0
Q ss_pred ---C-CCCCCCChHHHHHHHHHHHHHHH
Q 027740 179 ---V-DGPTQWPLRNLEELLEELVAIAK 202 (219)
Q Consensus 179 ---~-D~~~sl~p~el~~lv~~ir~i~~ 202 (219)
. .....++.+.+.++.+.++.+..
T Consensus 236 ~~L~~~~~~~~dl~~l~~~~~~~~~~~~ 263 (320)
T 3dxi_A 236 TYLNKHHGLNVDFNVLGNIITTFTPLLE 263 (320)
T ss_dssp HHHHHHSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCcCHHHHHHHHHHHHHHHH
Confidence 0 12245666666666666666543
No 414
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=60.95 E-value=28 Score=30.27 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=15.3
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A 78 (219)
|.+.++++.+ ++.||..-=... +.+++...
T Consensus 226 d~~~~~~l~~~~~ipIa~dE~~~-~~~~~~~~ 256 (366)
T 1tkk_A 226 DLAGLKKVTDATDTPIMADESVF-TPRQAFEV 256 (366)
T ss_dssp CHHHHHHHHHHCSSCEEECTTCC-SHHHHHHH
T ss_pred cHHHHHHHHhhCCCCEEEcCCCC-CHHHHHHH
Confidence 4454554443 456666554444 55555544
No 415
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=60.94 E-value=47 Score=29.83 Aligned_cols=76 Identities=9% Similarity=-0.066 Sum_probs=35.4
Q ss_pred HHhcCCCeEeeeCCcccHHHHhhhccc---cccCCC-CCCCHHHHHHHHhcCC--eEEEeCCCCCCHHHHHHHHHHHHHc
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGKVADI---IQIPAF-LCRQTDLLVAAAKTGK--IINIKKGQFCASSVMVNSAEKVRLA 85 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~~vd~---~kI~S~-~~~n~~LL~~~a~~gk--PVilstG~~~t~~ei~~A~e~i~~~ 85 (219)
.+++|+.++-+|+.+.+.+.++++-.. +.|... .+++..-++.+-+.+. -|++|-...+.+.|...+++..++.
T Consensus 252 L~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A~~~ 331 (428)
T 3bjs_A 252 LAEIQAGWLEEPFACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAY 331 (428)
T ss_dssp HHHTTCSCEECCSCTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHT
T ss_pred HHhcCCCEEECCCCccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 455666666666655555555444211 222222 2223333333333332 3444555545555555555555555
Q ss_pred CC
Q 027740 86 GN 87 (219)
Q Consensus 86 Gn 87 (219)
|-
T Consensus 332 gi 333 (428)
T 3bjs_A 332 RI 333 (428)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 416
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=60.93 E-value=85 Score=27.85 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=74.9
Q ss_pred Hhhh-ccccccCCCCCCC--HHHHHHHHhcCCe--EE-EeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC-CCCCC
Q 027740 32 VGKV-ADIIQIPAFLCRQ--TDLLVAAAKTGKI--IN-IKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-GYNDL 104 (219)
Q Consensus 32 l~~~-vd~~kI~S~~~~n--~~LL~~~a~~gkP--Vi-lstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~-~~~~~ 104 (219)
|.++ ++.+-+|+.-... .+.++.+++.+.. +. +.+ . ..++++.|++ .|.+-+.+.-..|.+ -. ..
T Consensus 34 L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~~~~~v~~~~r--~-~~~di~~a~~----~g~~~v~i~~~~s~~~~~-~~ 105 (382)
T 2ztj_A 34 LDEFGIEYIEVTTPVASPQSRKDAEVLASLGLKAKVVTHIQ--C-RLDAAKVAVE----TGVQGIDLLFGTSKYLRA-PH 105 (382)
T ss_dssp HHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEEEEEE--S-CHHHHHHHHH----TTCSEEEEEECC---------
T ss_pred HHHcCcCEEEEcCCcCCHHHHHHHHHHHhcCCCcEEEEEcc--c-ChhhHHHHHH----cCCCEEEEEeccCHHHHH-Hh
Confidence 3444 5555665543332 2456666665432 21 222 2 5788776665 577777776655432 11 11
Q ss_pred Ccc----c----hhHHHHHhcC--CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCC
Q 027740 105 IVD----P----RNLEWMREAN--CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDP 174 (219)
Q Consensus 105 ~~n----l----~~i~~lk~~~--~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~ 174 (219)
..+ + ..+...|+.+ +.|.++..-+. .-..+++..++.++..+ |+-+
T Consensus 106 ~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~---------------~~~~~~~~~~~~~~~~~-a~~i-------- 161 (382)
T 2ztj_A 106 GRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTF---------------RSEEQDLLAVYEAVAPY-VDRV-------- 161 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTT---------------TSCHHHHHHHHHHHGGG-CSEE--------
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCC---------------CCCHHHHHHHHHHHHHh-cCEE--------
Confidence 011 1 2233344457 88877654331 11245666778888888 8722
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHH
Q 027740 175 LNAPVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 175 d~a~~D~~~sl~p~el~~lv~~ir~ 199 (219)
.++|-.-.++|.++.++++.+++
T Consensus 162 --~l~DT~G~~~P~~~~~lv~~l~~ 184 (382)
T 2ztj_A 162 --GLADTVGVATPRQVYALVREVRR 184 (382)
T ss_dssp --EEEETTSCCCHHHHHHHHHHHHH
T ss_pred --EecCCCCCCCHHHHHHHHHHHHH
Confidence 24688888999999999999887
No 417
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=60.75 E-value=41 Score=27.17 Aligned_cols=124 Identities=14% Similarity=0.113 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHH----hhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEV----GKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l----~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~ 77 (219)
+|.+.+... ++.++..+-...++++.-.+ .+. ++++++.-....-.++++.+.+ ..+.+--|...+.++++.
T Consensus 2 ~~~~~~~~l-~~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~--~~~~~gag~vl~~d~~~~ 78 (207)
T 2yw3_A 2 EGMDPLAVL-AESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRK--SGLLLGAGTVRSPKEAEA 78 (207)
T ss_dssp -----CHHH-HHHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTT--SSCEEEEESCCSHHHHHH
T ss_pred CcchHHHHH-HhCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhC--CCCEEEeCeEeeHHHHHH
Confidence 455555443 55677666666666654333 233 8899998766655777777777 444455555657777777
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHH
Q 027740 78 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIART 157 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~a 157 (219)
|++ .|-.-+ |.+. .|...+...+..+.+++. .-|+ +.-+..
T Consensus 79 A~~----~GAd~v---~~~~--------~d~~v~~~~~~~g~~~i~-G~~t-----------------------~~e~~~ 119 (207)
T 2yw3_A 79 ALE----AGAAFL---VSPG--------LLEEVAALAQARGVPYLP-GVLT-----------------------PTEVER 119 (207)
T ss_dssp HHH----HTCSEE---EESS--------CCHHHHHHHHHHTCCEEE-EECS-----------------------HHHHHH
T ss_pred HHH----cCCCEE---EcCC--------CCHHHHHHHHHhCCCEEe-cCCC-----------------------HHHHHH
Confidence 754 465433 4321 355555555557888765 3454 344567
Q ss_pred HHHcCCcEEEE
Q 027740 158 AIAVGVDGVFM 168 (219)
Q Consensus 158 AvalGA~GlvI 168 (219)
|...|||-+-+
T Consensus 120 A~~~Gad~v~~ 130 (207)
T 2yw3_A 120 ALALGLSALKF 130 (207)
T ss_dssp HHHTTCCEEEE
T ss_pred HHHCCCCEEEE
Confidence 88999995544
No 418
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=60.65 E-value=7 Score=36.60 Aligned_cols=64 Identities=11% Similarity=0.065 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHhcCCCeEe--ee-------------CCcccHHHHhhh-ccccccCCCCCC------------CHHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVT--DV-------------HETVQCEEVGKV-ADIIQIPAFLCR------------QTDLLVA 54 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~t--t~-------------~d~~~~~~l~~~-vd~~kI~S~~~~------------n~~LL~~ 54 (219)
.|++.|.++.++.|+.|.- +| |...+++.+++- +|++|+--.... -..+-++
T Consensus 94 ~Glk~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~~da~~fa~WGVDylK~D~c~~~~~~~~~~~~~~~y~~m~~A 173 (479)
T 3lrk_A 94 NGMGHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREEEDAQFFANNRVDYLKYDNCYNKGQFGTPEISYHRYKAMSDA 173 (479)
T ss_dssp TCHHHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHHHTTCCEEEEECTTCTTCCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCeeEEEecCccccccCCCchhHHHHHHHHHHHHhCCcEEEEccCCCccccCCcchhHHHHHHHHHH
Confidence 3899999999999999865 44 333445567777 999997543221 1345678
Q ss_pred HHhcCCeEEEeC
Q 027740 55 AAKTGKIINIKK 66 (219)
Q Consensus 55 ~a~~gkPVilst 66 (219)
+.++|+||++|-
T Consensus 174 L~~tGRpI~~Sl 185 (479)
T 3lrk_A 174 LNKTGRPVFYSL 185 (479)
T ss_dssp HHHHCSCCEEEE
T ss_pred HHHhCCCeEEEe
Confidence 889999999985
No 419
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=60.45 E-value=27 Score=28.32 Aligned_cols=61 Identities=8% Similarity=-0.097 Sum_probs=36.3
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC--CCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEc
Q 027740 50 DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG--NPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 124 (219)
Q Consensus 50 ~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G--n~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~d 124 (219)
+.++.+.++|+||++-++.+ .+++. +.+++.+ ...+++ ||.+. +...+..+.+.|+-+.++
T Consensus 116 ~~l~~a~~~~lpv~iH~~~a--~~~~~---~il~~~~~~~~~~v~-H~~~g--------~~~~~~~~~~~g~yi~~~ 178 (264)
T 1xwy_A 116 AQLRIAADLNMPVFMHCRDA--HERFM---TLLEPWLDKLPGAVL-HCFTG--------TREEMQACVAHGIYIGIT 178 (264)
T ss_dssp HHHHHHHHHTCCEEEEEESC--HHHHH---HHHGGGGGGSSCEEE-CSCCC--------CHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHhCCcEEEEcCCc--hHHHH---HHHHhcCCCCCcEEE-EccCC--------CHHHHHHHHHCCeEEEEC
Confidence 56777888999999998754 45544 4455555 345644 98431 122233333357767764
No 420
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=60.15 E-value=18 Score=32.26 Aligned_cols=63 Identities=17% Similarity=0.243 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcCCCeEeeeCC--cccHHHHhhh-ccccccCCC---------------------CCCCH-HHHHHHHhc
Q 027740 4 GLKILEKVKIAYDIPIVTDVHE--TVQCEEVGKV-ADIIQIPAF---------------------LCRQT-DLLVAAAKT 58 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d--~~~~~~l~~~-vd~~kI~S~---------------------~~~n~-~LL~~~a~~ 58 (219)
..+.+++..+...||++.-.|- ....+.++.+ +|++-+... .++|+ +.++.+ ..
T Consensus 62 ~p~~i~~I~~av~iPV~~K~rig~~~e~qilea~GaD~Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~ 140 (330)
T 2yzr_A 62 DPALIEEIMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WE 140 (330)
T ss_dssp CHHHHHHHHHHCSSCEEEEEETTCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HH
T ss_pred CHHHHHHHHHhcCCCeEEEEeecchHHHHHHHHcCCCEEehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hc
Confidence 4677888888899999997777 6667777777 888754321 22344 356666 77
Q ss_pred CCeEEEeCC
Q 027740 59 GKIINIKKG 67 (219)
Q Consensus 59 gkPVilstG 67 (219)
|--+|=-+|
T Consensus 141 Ga~~i~t~g 149 (330)
T 2yzr_A 141 GAAMIRTKG 149 (330)
T ss_dssp TCSEEEECC
T ss_pred CcceeeccC
Confidence 999999999
No 421
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=59.80 E-value=44 Score=27.33 Aligned_cols=90 Identities=10% Similarity=-0.061 Sum_probs=55.2
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Ccc-c---HHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCCeEEEeCCCCC------
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETV-Q---CEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQFC------ 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~-~---~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gkPVilstG~~~------ 70 (219)
+.-+.+.+++.|..++.... +++ + ++.+.+. +|.+-+.+.+.. ..+.++.+.+.+.||++-.....
T Consensus 21 ~~gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~ 100 (306)
T 2vk2_A 21 TNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKSL 100 (306)
T ss_dssp HHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSCCCCSCGGG
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHHCCCCEEEecCCCCCCCccc
Confidence 34567888899988765332 322 1 2233333 777766655544 35788888888999876432110
Q ss_pred --------CHHHHHHHHHHHHHcC---CCcEEEEe
Q 027740 71 --------ASSVMVNSAEKVRLAG---NPNVMVCE 94 (219)
Q Consensus 71 --------t~~ei~~A~e~i~~~G---n~~i~L~~ 94 (219)
...-...+++++.+.| ..+|.++.
T Consensus 101 ~~~~V~~D~~~~g~~a~~~L~~~g~g~~~~I~~i~ 135 (306)
T 2vk2_A 101 YMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQ 135 (306)
T ss_dssp SSEEEECCHHHHHHHHHHHHHHHHTTSCEEEEEEE
T ss_pred eEEEEecCHHHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 1133566888888877 56777764
No 422
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=59.47 E-value=15 Score=32.44 Aligned_cols=29 Identities=17% Similarity=-0.039 Sum_probs=12.8
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVN 77 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~ 77 (219)
|.+.++++.+ ++.||..-=... +.+++..
T Consensus 247 d~~~~~~l~~~~~iPI~~dE~~~-~~~~~~~ 276 (388)
T 2nql_A 247 DIAGLEKVSKNTDVPIAVGEEWR-THWDMRA 276 (388)
T ss_dssp CHHHHHHHHTSCCSCEEECTTCC-SHHHHHH
T ss_pred hHHHHHHHHhhCCCCEEEeCCcC-CHHHHHH
Confidence 4444444433 345555444333 4444443
No 423
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=59.40 E-value=50 Score=26.71 Aligned_cols=90 Identities=8% Similarity=-0.002 Sum_probs=54.1
Q ss_pred HHHHHHHHHhcCC-CeEeeeC--Ccc----cHHHHhhh-ccccccCCCCCCC-HHHHHHHHhcCCeEEEeCCCCC-----
Q 027740 5 LKILEKVKIAYDI-PIVTDVH--ETV----QCEEVGKV-ADIIQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFC----- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi-~~~tt~~--d~~----~~~~l~~~-vd~~kI~S~~~~n-~~LL~~~a~~gkPVilstG~~~----- 70 (219)
+.-+.++++++|. .++.... ++. .++.+.+. +|.+-+.+.+... .+.++.+.+.+.||++=.....
T Consensus 21 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 100 (309)
T 2fvy_A 21 RKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALD 100 (309)
T ss_dssp HHHHHHHHHTCTTEEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSCCCHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecCCCCccccc
Confidence 4567888999996 6554322 322 12333333 7777666555443 4678888888999876433220
Q ss_pred -----------CHHHHHHHHHHHHH------------cCCCcEEEEe
Q 027740 71 -----------ASSVMVNSAEKVRL------------AGNPNVMVCE 94 (219)
Q Consensus 71 -----------t~~ei~~A~e~i~~------------~Gn~~i~L~~ 94 (219)
..+-...+++++.+ .|..+|.++.
T Consensus 101 ~~~~~~~V~~d~~~~g~~~~~~L~~~~~~~~~~~~~g~g~~~i~~i~ 147 (309)
T 2fvy_A 101 SYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLK 147 (309)
T ss_dssp TCTTEEEEECCHHHHHHHHHHHHHHHHHHCGGGCTTCSSSEEEEEEE
T ss_pred ccCccEEEecCHHHHHHHHHHHHHHHHhhcccccccCCCceEEEEEE
Confidence 11334567788877 5666776664
No 424
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=59.22 E-value=24 Score=25.18 Aligned_cols=104 Identities=14% Similarity=0.159 Sum_probs=58.3
Q ss_pred HHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCC
Q 027740 53 VAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQ 131 (219)
Q Consensus 53 ~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~ 131 (219)
..+.+.|.-|... . +.+| |.+.+......+++++.... +...-.+..+..+|+ .++||++-+++..
T Consensus 23 ~~L~~~g~~v~~~---~-~~~~---a~~~l~~~~~~dlvi~D~~l----~~~~~g~~~~~~l~~~~~~~ii~ls~~~~-- 89 (140)
T 3h5i_A 23 NILNKYGYTVEIA---L-TGEA---AVEKVSGGWYPDLILMDIEL----GEGMDGVQTALAIQQISELPVVFLTAHTE-- 89 (140)
T ss_dssp HHHHHTTCEEEEE---S-SHHH---HHHHHHTTCCCSEEEEESSC----SSSCCHHHHHHHHHHHCCCCEEEEESSSS--
T ss_pred HHHHHcCCEEEEe---c-ChHH---HHHHHhcCCCCCEEEEeccC----CCCCCHHHHHHHHHhCCCCCEEEEECCCC--
Confidence 3444556555432 1 4444 44455543467899998642 110113455666676 6889887566552
Q ss_pred CCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 027740 132 PAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKV 203 (219)
Q Consensus 132 ~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~ 203 (219)
. .....+..+||++ +|.|- +++++|...++.+.+..+.
T Consensus 90 --------------~------~~~~~~~~~g~~~-~l~KP-------------~~~~~l~~~i~~~l~~~~~ 127 (140)
T 3h5i_A 90 --------------P------AVVEKIRSVTAYG-YVMKS-------------ATEQVLITIVEMALRLYEA 127 (140)
T ss_dssp --------------C------CCCGGGGGSCEEE-EEETT-------------CCHHHHHHHHHHHHHHHHH
T ss_pred --------------H------HHHHHHHhCCCcE-EEeCC-------------CCHHHHHHHHHHHHHHHHh
Confidence 0 1123567789997 55543 3467787777766555443
No 425
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=59.20 E-value=39 Score=27.08 Aligned_cols=138 Identities=12% Similarity=0.030 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHhc-CCCeEeeeCCccc----HHHHhhh-ccccccCCCCCCC--HHHHHHHHhcCCeEE--EeCCCCCCH
Q 027740 3 EGLKILEKVKIAY-DIPIVTDVHETVQ----CEEVGKV-ADIIQIPAFLCRQ--TDLLVAAAKTGKIIN--IKKGQFCAS 72 (219)
Q Consensus 3 ~gl~~L~~~~~~~-Gi~~~tt~~d~~~----~~~l~~~-vd~~kI~S~~~~n--~~LL~~~a~~gkPVi--lstG~~~t~ 72 (219)
.|...+++.++.+ |.+++-+++--.- ++.+.++ +|++-+-...-.. ..+++++.+.|+++. +.++. |
T Consensus 42 ~G~~~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~--t- 118 (216)
T 1q6o_A 42 EGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW--T- 118 (216)
T ss_dssp HCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC--C-
T ss_pred hCHHHHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC--C-
Confidence 3555666665554 6666665443222 2334455 6666554332222 256667777788864 33332 3
Q ss_pred HHHHHHHHHHHHcCCCcEEEEeecCC---CCCCCCCccchhHHHHHh-c--CCCEEEcCCCCCCCCCCCccCCCCccCCC
Q 027740 73 SVMVNSAEKVRLAGNPNVMVCERGTM---FGYNDLIVDPRNLEWMRE-A--NCPVVADVTHSLQQPAGKKLDGGGVASGG 146 (219)
Q Consensus 73 ~ei~~A~e~i~~~Gn~~i~L~~cgs~---~~~~~~~~nl~~i~~lk~-~--~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G 146 (219)
+. -++.+...|..++++ |.+.. .++.. .+..+..+|+ . ++||.+++--
T Consensus 119 ~~---~~~~l~~~~~~~~vl-~~a~~~~~~G~~g---~~~~i~~lr~~~~~~~~i~v~GGI------------------- 172 (216)
T 1q6o_A 119 WE---QAQQWRDAGIGQVVY-HRSRDAQAAGVAW---GEADITAIKRLSDMGFKVTVTGGL------------------- 172 (216)
T ss_dssp HH---HHHHHHHTTCCEEEE-ECCHHHHHTTCCC---CHHHHHHHHHHHHTTCEEEEESSC-------------------
T ss_pred hh---hHHHHHhcCcHHHHH-HHHHHHHhcCCCC---CHHHHHHHHHhcCCCCcEEEECCc-------------------
Confidence 22 112233345544544 44332 12221 2455666666 4 6778876322
Q ss_pred CcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 147 LRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 147 ~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+ +.-+..++..||+++++=+-.+
T Consensus 173 -~---~~~~~~~~~aGad~ivvG~~I~ 195 (216)
T 1q6o_A 173 -A---LEDLPLFKGIPIHVFIAGRSIR 195 (216)
T ss_dssp -C---GGGGGGGTTSCCSEEEESHHHH
T ss_pred -C---hhhHHHHHHcCCCEEEEeehhc
Confidence 2 1123466788999988865543
No 426
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=58.83 E-value=32 Score=25.13 Aligned_cols=88 Identities=14% Similarity=0.048 Sum_probs=49.8
Q ss_pred HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcC-CCcEEEEeecCCCCCCCCCccchhHHHHHh--cCCCEEEcCC
Q 027740 50 DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAG-NPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVT 126 (219)
Q Consensus 50 ~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~G-n~~i~L~~cgs~~~~~~~~~nl~~i~~lk~--~~~pV~~ds~ 126 (219)
.|-+.+.+.|.-|+-.. .+.+|... .+.... ..+++|+.... +. .-.+..+..+|+ .++||++-++
T Consensus 51 ~l~~~L~~~g~~v~~~~---~~~~~al~---~l~~~~~~~dliilD~~l----~~-~~g~~~~~~lr~~~~~~~ii~ls~ 119 (157)
T 3hzh_A 51 QLTQIFTSEGFNIIDTA---ADGEEAVI---KYKNHYPNIDIVTLXITM----PK-MDGITCLSNIMEFDKNARVIMISA 119 (157)
T ss_dssp HHHHHHHHTTCEEEEEE---SSHHHHHH---HHHHHGGGCCEEEECSSC----SS-SCHHHHHHHHHHHCTTCCEEEEES
T ss_pred HHHHHHHhCCCeEEEEE---CCHHHHHH---HHHhcCCCCCEEEEeccC----CC-ccHHHHHHHHHhhCCCCcEEEEec
Confidence 33344455666654121 14555444 444432 46899988532 21 112455666666 4788887566
Q ss_pred CCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 127 HSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 127 Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
+. . ......+..+||++ +|.|-
T Consensus 120 ~~-----------------~-----~~~~~~~~~~g~~~-~l~KP 141 (157)
T 3hzh_A 120 LG-----------------K-----EQLVKDCLIKGAKT-FIVKP 141 (157)
T ss_dssp CC-----------------C-----HHHHHHHHHTTCSE-EEESS
T ss_pred cC-----------------c-----HHHHHHHHHcCCCE-EEeCC
Confidence 54 2 45567889999997 55554
No 427
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=58.63 E-value=18 Score=34.73 Aligned_cols=98 Identities=13% Similarity=0.149 Sum_probs=65.3
Q ss_pred HHHHHHHHHHhcC--CCeEeeeCCcccHHHHhhh---ccccccCCCCC-----------CCHHHHHHHHhcCCeEEEeCC
Q 027740 4 GLKILEKVKIAYD--IPIVTDVHETVQCEEVGKV---ADIIQIPAFLC-----------RQTDLLVAAAKTGKIINIKKG 67 (219)
Q Consensus 4 gl~~L~~~~~~~G--i~~~tt~~d~~~~~~l~~~---vd~~kI~S~~~-----------~n~~LL~~~a~~gkPVilstG 67 (219)
-+..++++.++.| +.+++-+-.++.++-+.+. .|.+-|+-+|+ .+-.+++.+-+.||||++.|-
T Consensus 220 Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQ 299 (606)
T 3t05_A 220 DVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQ 299 (606)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehH
Confidence 4567777776654 7888888888877666554 77777765543 245677888889999999544
Q ss_pred CC--------CCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCC
Q 027740 68 QF--------CASSVMVNSAEKVRLAGNPNVMVCERGTMFGYN 102 (219)
Q Consensus 68 ~~--------~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~ 102 (219)
|- .|=.|+-..+..+.. |-.-++|---+..-.||
T Consensus 300 MLeSMi~~p~PTRAEvsDVanAv~d-GaDavMLSgETA~G~yP 341 (606)
T 3t05_A 300 MLDSMQRNPRATRAEASDVANAIYD-GTDAVMLSGETAAGLYP 341 (606)
T ss_dssp SSGGGTTCSSCCHHHHHHHHHHHHH-TCSEEEECHHHHSCSCS
T ss_pred HHHHhhcCCCccHHHHHHHHHHHHc-CCCEEEecccccCCCCH
Confidence 32 277888888887764 55555554333322455
No 428
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=58.63 E-value=35 Score=29.69 Aligned_cols=23 Identities=4% Similarity=0.016 Sum_probs=11.7
Q ss_pred HHhcCCCeEeeeCCcccHHHHhh
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGK 34 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~ 34 (219)
.+++|+.++-+|+.+.+.+.+.+
T Consensus 211 l~~~~i~~iEqP~~~~~~~~~~~ 233 (370)
T 1nu5_A 211 LEEAGVELVEQPVPRANFGALRR 233 (370)
T ss_dssp HHHHTCCEEECCSCTTCHHHHHH
T ss_pred HHhcCcceEeCCCCcccHHHHHH
Confidence 34455555555555544444443
No 429
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=58.55 E-value=10 Score=32.72 Aligned_cols=43 Identities=14% Similarity=0.116 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 152 PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
...+++|..+||. ++=.|.-- +|+..|++|+-|+++++.||+-
T Consensus 33 a~~A~~~~~AGAa--ivHlHvRd----~~G~~s~d~~~~~e~~~~IR~~ 75 (275)
T 3no5_A 33 VESTQAAFEAGAT--LVHLHVRN----DDETPTSNPDRFALVLEGIRKH 75 (275)
T ss_dssp HHHHHHHHHHTCC--EEEECEEC----TTSCEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCc--EEEEeecC----CCCCcCCCHHHHHHHHHHHHHh
Confidence 4557788999998 88888431 4688899999999999999974
No 430
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=58.53 E-value=30 Score=30.25 Aligned_cols=111 Identities=14% Similarity=0.075 Sum_probs=63.8
Q ss_pred HHHHHHHHHhcCCC-eEeeeCCcc----------------cHHHHhhh-cc--------------ccccCCCC--CC--C
Q 027740 5 LKILEKVKIAYDIP-IVTDVHETV----------------QCEEVGKV-AD--------------IIQIPAFL--CR--Q 48 (219)
Q Consensus 5 l~~L~~~~~~~Gi~-~~tt~~d~~----------------~~~~l~~~-vd--------------~~kI~S~~--~~--n 48 (219)
.+.+.+.++++|+. +.++=+.+. +++.|.++ .+ +++||... .+ +
T Consensus 92 ~~~l~~la~~~g~~i~~~tG~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q 171 (339)
T 3gtx_A 92 PAFLREVSEATGLQILCATGFYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYE 171 (339)
T ss_dssp HHHHHHHHHHHCCEEECEECCCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHH
T ss_pred HHHHHHHHHHcCCcEEEEcCCCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHH
Confidence 56788888999975 445655552 23445443 22 11444332 22 1
Q ss_pred H----HHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHHHHhcCCCEE
Q 027740 49 T----DLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVV 122 (219)
Q Consensus 49 ~----~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~ 122 (219)
. .-++.+.++|+||++-+|..-.-.| .++.+++.|.+ .++++||..+ . ++.-...+-+.|+-++
T Consensus 172 ~~~f~aq~~lA~~~glPViiH~~~gr~a~~---~~~iL~~~~~~~~~~vi~H~~~~---~----~~e~a~~~l~~G~~i~ 241 (339)
T 3gtx_A 172 QLFFRAAARVQRETGVPIITHTQEGQQGPQ---QAELLTSLGADPARIMIGHMDGN---T----DPAYHRETLRHGVSIA 241 (339)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECSTTCCHHH---HHHHHHHTTCCGGGEEECCGGGC---C----CHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHHHCCeEEEeCCCCcCHHH---HHHHHHHcCCCcccEEEEccCCC---C----CHHHHHHHHHcCcEEE
Confidence 1 3355666789999999975412223 36777777765 5889999632 1 3333333323577888
Q ss_pred EcC
Q 027740 123 ADV 125 (219)
Q Consensus 123 ~ds 125 (219)
||.
T Consensus 242 ~~g 244 (339)
T 3gtx_A 242 FDR 244 (339)
T ss_dssp ECC
T ss_pred Ecc
Confidence 854
No 431
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=58.24 E-value=66 Score=25.79 Aligned_cols=91 Identities=12% Similarity=0.073 Sum_probs=58.0
Q ss_pred HHHHHHHHHhc-CCCeEeee--C---Cccc----HHHHhhh-ccccccCCCCC-CCHHHHHHHHhcCCeEEEeCCCCC--
Q 027740 5 LKILEKVKIAY-DIPIVTDV--H---ETVQ----CEEVGKV-ADIIQIPAFLC-RQTDLLVAAAKTGKIINIKKGQFC-- 70 (219)
Q Consensus 5 l~~L~~~~~~~-Gi~~~tt~--~---d~~~----~~~l~~~-vd~~kI~S~~~-~n~~LL~~~a~~gkPVilstG~~~-- 70 (219)
+.-+.+++++. |..+.... . +++. ++.+.+. +|.+-+.+.+. ...+.++.+.+.|.||++=.....
T Consensus 28 ~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~ 107 (304)
T 3gbv_A 28 QKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQIKDA 107 (304)
T ss_dssp HHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSCCTTS
T ss_pred HHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 45677888876 55554432 2 3322 2333333 78777766655 367889999899999987432110
Q ss_pred ---------CHHHHHHHHHHHHHcCC--CcEEEEee
Q 027740 71 ---------ASSVMVNSAEKVRLAGN--PNVMVCER 95 (219)
Q Consensus 71 ---------t~~ei~~A~e~i~~~Gn--~~i~L~~c 95 (219)
..+-...+++++.+.|. .+|.++..
T Consensus 108 ~~~~~V~~D~~~~g~~a~~~l~~~g~~~~~i~~i~~ 143 (304)
T 3gbv_A 108 PPLAFFGQNSHQSGYFAARMLMLLAVNDREIVIFRK 143 (304)
T ss_dssp CCSEEEECCHHHHHHHHHHHHHHHSTTCSEEEEEEE
T ss_pred CceEEEecChHHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 13456678889999988 88888864
No 432
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=58.20 E-value=30 Score=27.92 Aligned_cols=91 Identities=10% Similarity=0.025 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhcCCCeEee-eCCcc-------cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC----
Q 027740 4 GLKILEKVKIAYDIPIVTD-VHETV-------QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC---- 70 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt-~~d~~-------~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~---- 70 (219)
.++.+++.++++||.+.+- ++... .++...++ ++.+.+.+..-.-..+.+.+.+.|..+.+.+....
T Consensus 64 ~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l~~En~~~~~~~~ 143 (262)
T 3p6l_A 64 TQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISVHNHPQPSDYW 143 (262)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEEECCSSSSSSS
T ss_pred HHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEEEEEeCCCccccC
Confidence 4788999999999998763 22211 23444445 66777766543334566666678999999987652
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCC
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTM 98 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~ 98 (219)
|.+++. +.+.. +.+++-+|-....
T Consensus 144 ~~~~~~---~ll~~-~~~~~g~~~D~~h 167 (262)
T 3p6l_A 144 KPENLL---KAISG-RSQSLGSCSDVGH 167 (262)
T ss_dssp SHHHHH---HHHTT-SCTTEEEEEEHHH
T ss_pred CHHHHH---HHHHh-CCCceEEEechHH
Confidence 345544 44443 5678888877654
No 433
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=57.95 E-value=32 Score=28.39 Aligned_cols=137 Identities=18% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHHhhhccccccCCCCCC--CHHHHHHHHh-cCCeEEEeCCCCCCHHH-HHHHHHHHHHcCCCcEEEEeecCCCCCCCC
Q 027740 29 CEEVGKVADIIQIPAFLCR--QTDLLVAAAK-TGKIINIKKGQFCASSV-MVNSAEKVRLAGNPNVMVCERGTMFGYNDL 104 (219)
Q Consensus 29 ~~~l~~~vd~~kI~S~~~~--n~~LL~~~a~-~gkPVilstG~~~t~~e-i~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~ 104 (219)
++.+...++++||+-.... -.+.++++.+ .|.+|++-.-.+ ++.+ +..+++.+...|. +++-+|. +...
T Consensus 31 v~~~~~~v~~~Kvg~~lf~~~G~~~v~~l~~~~g~~v~lD~Kl~-DipnTv~~~~~~~~~~ga-d~vtvh~-----~~G~ 103 (228)
T 3m47_A 31 TGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVA-DIPETNEKICRATFKAGA-DAIIVHG-----FPGA 103 (228)
T ss_dssp HHTTTTTCSEEEEEHHHHHHHCTHHHHHHHHHHCCEEEEEEEEC-SCHHHHHHHHHHHHHTTC-SEEEEES-----TTCH
T ss_pred HHHcCCcccEEEEcHHHHHhcCHHHHHHHHhcCCCeEEEEEeec-ccHhHHHHHHHHHHhCCC-CEEEEec-----cCCH
Q ss_pred CccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCC
Q 027740 105 IVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQ 184 (219)
Q Consensus 105 ~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~s 184 (219)
+.=-.++...++.+..|.+=.+-+. .....-..+++...+..|...|.+|++.-..
T Consensus 104 ~~l~~~~~~~~~~g~~v~vLt~~s~-----------~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at------------- 159 (228)
T 3m47_A 104 DSVRACLNVAEEMGREVFLLTEMSH-----------PGAEMFIQGAADEIARMGVDLGVKNYVGPST------------- 159 (228)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCCCS-----------GGGGTTHHHHHHHHHHHHHHTTCCEEECCSS-------------
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCC-----------ccHHHHHHHHHHHHHHHHHHhCCcEEEECCC-------------
Q ss_pred CChHHHHHHHHHH
Q 027740 185 WPLRNLEELLEEL 197 (219)
Q Consensus 185 l~p~el~~lv~~i 197 (219)
.|++++.+.+.+
T Consensus 160 -~~~e~~~ir~~~ 171 (228)
T 3m47_A 160 -RPERLSRLREII 171 (228)
T ss_dssp -CHHHHHHHHHHH
T ss_pred -ChHHHHHHHHhc
No 434
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=57.84 E-value=16 Score=34.72 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHHcC-----CCcEEEEeecCCCCCCC----CCccchhHHHHHh---------cCCCEEEcCCCCCCCC
Q 027740 71 ASSVMVNSAEKVRLAG-----NPNVMVCERGTMFGYND----LIVDPRNLEWMRE---------ANCPVVADVTHSLQQP 132 (219)
Q Consensus 71 t~~ei~~A~e~i~~~G-----n~~i~L~~cgs~~~~~~----~~~nl~~i~~lk~---------~~~pV~~ds~Hs~~~~ 132 (219)
+.+++..-++...+.| ..=|=+.=+.|..+.+. +++. |.++.++. .++||-+|+.+
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~-RvvpvI~~i~~~~~~~~~~vpISIDT~~----- 320 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIR-RSIPLIKAIRESTELPQDKVILSIDTYR----- 320 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHH-HHHHHHHHHHHCSSSCGGGEEEEEECCC-----
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHH-HHHHHHHHHHhhccccCCCCeEEEeCCc-----
Confidence 6788888778888888 43232333333333222 2222 44554443 27789888666
Q ss_pred CCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEe
Q 027740 133 AGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFME 169 (219)
Q Consensus 133 ~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIE 169 (219)
+.++++|+.+||+ +|-
T Consensus 321 -------------------a~VaeaAl~aGad--IIN 336 (545)
T 2bmb_A 321 -------------------SNVAKEAIKVGVD--IIN 336 (545)
T ss_dssp -------------------HHHHHHHHHTTCC--EEE
T ss_pred -------------------HHHHHHHHHcCCC--EEE
Confidence 4567777777887 665
No 435
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=57.82 E-value=29 Score=30.74 Aligned_cols=30 Identities=7% Similarity=-0.045 Sum_probs=16.4
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A 78 (219)
|.+.++++.+ ++.||..-=... +.+++...
T Consensus 228 ~~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~ 258 (397)
T 2qde_A 228 DLDGMARLRGKVATPIYADESAQ-ELHDLLAI 258 (397)
T ss_dssp CHHHHHHHHTTCSSCEEESTTCC-SHHHHHHH
T ss_pred hHHHHHHHHhhCCCCEEEeCCcC-CHHHHHHH
Confidence 5555555544 456766554444 66555544
No 436
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=57.81 E-value=46 Score=29.10 Aligned_cols=76 Identities=12% Similarity=0.081 Sum_probs=35.5
Q ss_pred HHhcCCCeEeeeCCcccHHHHhhhcc--ccccCCCC-CCCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHHHHHHHHHcC
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGKVAD--IIQIPAFL-CRQTDLLVAAAKTG--KIINIKKGQFCASSVMVNSAEKVRLAG 86 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~~vd--~~kI~S~~-~~n~~LL~~~a~~g--kPVilstG~~~t~~ei~~A~e~i~~~G 86 (219)
.+++|+.++-+|+.+.+.+.++++-. -+.|.+.+ +.+..-++.+-+.+ --|++|.+..+.+.++...+...++.|
T Consensus 211 l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g 290 (370)
T 1chr_A 211 LEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASG 290 (370)
T ss_dssp HHTTTEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHT
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcC
Confidence 34566666666666555555444411 12233332 23333233333222 235555555555666655555555554
Q ss_pred C
Q 027740 87 N 87 (219)
Q Consensus 87 n 87 (219)
-
T Consensus 291 ~ 291 (370)
T 1chr_A 291 I 291 (370)
T ss_dssp C
T ss_pred C
Confidence 3
No 437
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=57.78 E-value=48 Score=26.59 Aligned_cols=90 Identities=9% Similarity=-0.044 Sum_probs=53.8
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Cccc----HHHHhhh-ccccccCCCCCCCHHHHHHHHh-cCCeEEEeCCCC-----C-
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETVQ----CEEVGKV-ADIIQIPAFLCRQTDLLVAAAK-TGKIINIKKGQF-----C- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~~----~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~-~gkPVilstG~~-----~- 70 (219)
+.-+.+.+++.|..+..... +++. ++.+.+. +|.+-+.+.+.. .++++.+.+ .+.||++-.... .
T Consensus 26 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~~~~~~~~~ 104 (289)
T 1dbq_A 26 IEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWGEAKADFTD 104 (289)
T ss_dssp HHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSCCC-HHHHHHHHHTTTSCEEEEECSSCCSSSCE
T ss_pred HHHHHHHHHHcCCeEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEeccCC-HHHHHHHHhccCCCEEEEccCCCccCcCC
Confidence 45677888899987765433 2222 2333333 776665444332 345566655 689977632211 0
Q ss_pred -----CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 -----ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 -----t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 105 ~V~~d~~~~~~~~~~~L~~~G~~~i~~i~~ 134 (289)
T 1dbq_A 105 AVIDNAFEGGYMAGRYLIERGHREIGVIPG 134 (289)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred EEEeCcHHHHHHHHHHHHHCCCCeEEEEec
Confidence 1244567888999999999988753
No 438
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=57.60 E-value=50 Score=23.69 Aligned_cols=82 Identities=16% Similarity=0.204 Sum_probs=52.0
Q ss_pred HcCCCcEEEEeecCCCCCCCCCccchhHHHHHh----cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHH
Q 027740 84 LAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE----ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAI 159 (219)
Q Consensus 84 ~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~----~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAv 159 (219)
.....+++++.-.. +. .-.+..+..+|+ .++||++=+++. . ......+.
T Consensus 56 ~~~~~dliilD~~l----~~-~~g~~~~~~lr~~~~~~~~pii~~t~~~-----------------~-----~~~~~~~~ 108 (152)
T 3heb_A 56 SAGRAQLVLLDLNL----PD-MTGIDILKLVKENPHTRRSPVVILTTTD-----------------D-----QREIQRCY 108 (152)
T ss_dssp GTTCBEEEEECSBC----SS-SBHHHHHHHHHHSTTTTTSCEEEEESCC-----------------C-----HHHHHHHH
T ss_pred ccCCCCEEEEeCCC----CC-CcHHHHHHHHHhcccccCCCEEEEecCC-----------------C-----HHHHHHHH
Confidence 34567888887532 21 112445556665 267887755554 2 44566789
Q ss_pred HcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Q 027740 160 AVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVSKG 206 (219)
Q Consensus 160 alGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~lg~ 206 (219)
..||++ +|.|- +++++|...++.+...+..+..
T Consensus 109 ~~g~~~-~l~KP-------------~~~~~l~~~i~~~~~~~~~~~~ 141 (152)
T 3heb_A 109 DLGANV-YITKP-------------VNYENFANAIRQLGLFFSVMQV 141 (152)
T ss_dssp HTTCSE-EEECC-------------SSHHHHHHHHHHHHHHHTTSCC
T ss_pred HCCCcE-EEeCC-------------CCHHHHHHHHHHHHHHHHHcCC
Confidence 999997 55553 3577888888888777766644
No 439
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=57.31 E-value=89 Score=26.48 Aligned_cols=107 Identities=13% Similarity=0.045 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCC------CCCC-CC--ccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCC
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMF------GYND-LI--VDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGG 141 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~------~~~~-~~--~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~ 141 (219)
+..+++.|++ .|.+.+.+.-..+.. +... +. .=...+...|+.+++|.++-..+..-|.. +
T Consensus 82 ~~~~i~~a~~----ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~------~ 151 (298)
T 2cw6_A 82 NLKGFEAAVA----AGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYE------G 151 (298)
T ss_dssp SHHHHHHHHH----TTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTT------B
T ss_pred CHHhHHHHHH----CCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC------C
Confidence 6777776654 588888887665521 0000 00 00123444555677775433322211110 0
Q ss_pred ccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 142 VASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 142 ~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
.-..+++..++.++..+||+-+. ++|---.++|+++.++++.+++.
T Consensus 152 ---~~~~~~~~~~~~~~~~~Ga~~i~----------l~DT~G~~~P~~~~~lv~~l~~~ 197 (298)
T 2cw6_A 152 ---KISPAKVAEVTKKFYSMGCYEIS----------LGDTIGVGTPGIMKDMLSAVMQE 197 (298)
T ss_dssp ---SCCHHHHHHHHHHHHHTTCSEEE----------EEETTSCCCHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHHcCCCEEE----------ecCCCCCcCHHHHHHHHHHHHHh
Confidence 01235667788889999998432 34777789999999999998864
No 440
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=57.17 E-value=28 Score=33.21 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=61.3
Q ss_pred cccHHHHhhh-ccccccCCCCCCC---HHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEe-----
Q 027740 26 TVQCEEVGKV-ADIIQIPAFLCRQ---TDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCE----- 94 (219)
Q Consensus 26 ~~~~~~l~~~-vd~~kI~S~~~~n---~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~----- 94 (219)
.+-++.|.+. +|++-|-+..-.+ .++++++.+. ..||+.-+= .|.+..+. +...|.. .+.+=
T Consensus 283 ~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNV--aT~e~a~~----Li~aGAD-~vkVGiGpGS 355 (556)
T 4af0_A 283 KDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNV--VTREQAAQ----LIAAGAD-GLRIGMGSGS 355 (556)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEE--CSHHHHHH----HHHHTCS-EEEECSSCST
T ss_pred HHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccc--cCHHHHHH----HHHcCCC-EEeecCCCCc
Confidence 3445556666 8888887776654 4555556555 456665443 35554443 3345653 33322
Q ss_pred -ecCC----CCCCCCCccchhHHHH---Hh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcE
Q 027740 95 -RGTM----FGYNDLIVDPRNLEWM---RE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDG 165 (219)
Q Consensus 95 -cgs~----~~~~~~~~nl~~i~~l---k~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~G 165 (219)
|++. .++| .+.+|-.. .+ +++||+.|.--.. .| .+ .-|+|+||+-
T Consensus 356 iCtTr~v~GvG~P----Q~tAi~~~a~~a~~~~vpvIADGGI~~---------------sG------Di-~KAlaaGAd~ 409 (556)
T 4af0_A 356 ICITQEVMAVGRP----QGTAVYAVAEFASRFGIPCIADGGIGN---------------IG------HI-AKALALGASA 409 (556)
T ss_dssp TBCCTTTCCSCCC----HHHHHHHHHHHHGGGTCCEEEESCCCS---------------HH------HH-HHHHHTTCSE
T ss_pred ccccccccCCCCc----HHHHHHHHHHHHHHcCCCEEecCCcCc---------------ch------HH-HHHhhcCCCE
Confidence 3332 1333 34444333 23 7899998733221 12 33 3689999998
Q ss_pred EEEee
Q 027740 166 VFMEV 170 (219)
Q Consensus 166 lvIEk 170 (219)
+||=.
T Consensus 410 VMlGs 414 (556)
T 4af0_A 410 VMMGG 414 (556)
T ss_dssp EEEST
T ss_pred EEEch
Confidence 88754
No 441
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=57.14 E-value=48 Score=23.37 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=61.9
Q ss_pred HHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHH-cCCCcEEEEeecCCCCCCCCCccchhHHHHHh--cCCCEEEcCCCC
Q 027740 52 LVAAAKTGKIINIKKGQFCASSVMVNSAEKVRL-AGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHS 128 (219)
Q Consensus 52 L~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~-~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~--~~~pV~~ds~Hs 128 (219)
-..+.+.|.-|...+ +.++. .+.+.. ....+++++.... +. .-.+..+..+|+ .++||++-+++.
T Consensus 20 ~~~l~~~g~~v~~~~----~~~~a---~~~~~~~~~~~dlvi~d~~l----~~-~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 20 KFLLEIDGNEVLTAS----SSTEG---LRIFTENCNSIDVVITDMKM----PK-LSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp HHHHHHTTCEEEEES----SHHHH---HHHHHHTTTTCCEEEEESCC----SS-SCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred HHHHHhCCceEEEeC----CHHHH---HHHHHhCCCCCCEEEEeCCC----CC-CcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 334445565444221 44554 444554 3567899998642 21 113455666766 368887756654
Q ss_pred CCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 027740 129 LQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAIAKVS 204 (219)
Q Consensus 129 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i~~~l 204 (219)
. ......+...||++ +|.|- +++++|...++.+..-.+..
T Consensus 88 -----------------~-----~~~~~~~~~~g~~~-~l~kp-------------~~~~~l~~~l~~~~~~~~~~ 127 (143)
T 3jte_A 88 -----------------D-----LDNAILAMKEGAFE-YLRKP-------------VTAQDLSIAINNAINRKKLL 127 (143)
T ss_dssp -----------------C-----HHHHHHHHHTTCSE-EEESS-------------CCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------C-----HHHHHHHHHhCcce-eEeCC-------------CCHHHHHHHHHHHHHHHHHH
Confidence 2 45566889999997 56554 35678877777665555444
No 442
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=57.05 E-value=9.1 Score=31.10 Aligned_cols=90 Identities=9% Similarity=-0.164 Sum_probs=56.5
Q ss_pred HHHHHHHHHhcCCCeEe--eeCCccc----HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVT--DVHETVQ----CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~t--t~~d~~~----~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+.+++.|..++. +..+... ++.+.+. +|.+-+.+.+..+..+++ ..+.+.||++=.....
T Consensus 31 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~-~~~~~iPvV~~~~~~~~~~~V~~ 109 (289)
T 3g85_A 31 LRGLQSKLAKQNYNYNVVICPYKTDCLHLEKGISKENSFDAAIIANISNYDLEYLN-KASLTLPIILFNRLSNKYSSVNV 109 (289)
T ss_dssp HHHHHHHHHHTTTCSEEEEEEECTTCGGGCGGGSTTTCCSEEEESSCCHHHHHHHH-HCCCSSCEEEESCCCSSSEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEecCCCchhHHHHHHHHhccCCCEEEEecCCcccHHHHH-hccCCCCEEEECCCCCCCCEEEe
Confidence 45677888888887643 3333332 2223333 777666665544444444 4467899987443221
Q ss_pred -CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 -ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 -t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...+++++.+.|..+|.++..
T Consensus 110 D~~~~~~~a~~~L~~~G~~~i~~i~~ 135 (289)
T 3g85_A 110 DNYKMGEKASLLFAKKRYKSAAAILT 135 (289)
T ss_dssp CHHHHHHHHHHHHHHTTCCBCEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3456677899999999999988864
No 443
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=56.90 E-value=76 Score=25.61 Aligned_cols=89 Identities=15% Similarity=0.055 Sum_probs=55.7
Q ss_pred HHHHHHHHHhcCCCeEeee----CCcc-c---HHHHhhh-ccccccCCCCCCC-HHHHHHHHhcCCeEEEeCCCCCCH--
Q 027740 5 LKILEKVKIAYDIPIVTDV----HETV-Q---CEEVGKV-ADIIQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFCAS-- 72 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~----~d~~-~---~~~l~~~-vd~~kI~S~~~~n-~~LL~~~a~~gkPVilstG~~~t~-- 72 (219)
+.-+.+.++++|..++... .+.+ + ++.+.+. +|.+-+.+.+... .+.++.+.+.+.||++=.... ..
T Consensus 20 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~-~~~~ 98 (288)
T 1gud_A 20 KKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKI-DMDN 98 (288)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEESSCC-CHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEECCCC-Cccc
Confidence 4566788899998766533 2322 2 2233333 7777776555443 467888888899987643321 11
Q ss_pred -----------------HHHHHHHHHHHHc-C--CCcEEEEe
Q 027740 73 -----------------SVMVNSAEKVRLA-G--NPNVMVCE 94 (219)
Q Consensus 73 -----------------~ei~~A~e~i~~~-G--n~~i~L~~ 94 (219)
.-...|++++.+. | ..+|.++.
T Consensus 99 ~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~G~~~~~I~~i~ 140 (288)
T 1gud_A 99 LKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIE 140 (288)
T ss_dssp HHHTTCCCSEEEECCHHHHHHHHHHHHHHHHGGGCEEEEEEE
T ss_pred ccccCCceeEEECCChHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 2245688899888 8 77887764
No 444
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=56.84 E-value=2.4 Score=37.31 Aligned_cols=48 Identities=31% Similarity=0.371 Sum_probs=31.7
Q ss_pred CccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 105 IVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 105 ~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
..|+..|..+++ .++||+..+. +|... +.-+..+..+|+||+||=+-.
T Consensus 184 ~ad~elI~~Ike~~~IPVV~IAn------------------GGI~T--pedA~~~le~GaDGVmVGrAI 232 (291)
T 3o07_A 184 RVPVSLLKDVLEKGKLPVVNFAA------------------GGVAT--PADAALLMQLGCDGVFVGSGI 232 (291)
T ss_dssp TSCHHHHHHHHHHTSCSSCEEBC------------------SSCCS--HHHHHHHHHTTCSCEEECGGG
T ss_pred CCCHHHHHHHHHccCCCEEEecC------------------CCCCC--HHHHHHHHHhCCCEEEEchHH
Confidence 467888888888 7899863111 11100 445566679999999997653
No 445
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=56.43 E-value=81 Score=26.92 Aligned_cols=80 Identities=13% Similarity=0.037 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhcCCCeEee-eCCcc-------cHHHHhhh----------------ccccccCCCCCCCHHHHHHHHh--
Q 027740 4 GLKILEKVKIAYDIPIVTD-VHETV-------QCEEVGKV----------------ADIIQIPAFLCRQTDLLVAAAK-- 57 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt-~~d~~-------~~~~l~~~----------------vd~~kI~S~~~~n~~LL~~~a~-- 57 (219)
-++.+.+.|.+.||.++|- .|+.+ .+++|-++ +-+--||..+.-..++.+.+.+
T Consensus 49 ~l~~i~~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~~l~~~i~~ae 128 (253)
T 3sgv_B 49 SVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSE 128 (253)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC-----------CHHHHHHHHTTHHHHHHHHHHTTCEEEEESCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEEEchhccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCeEEEEEeehhhCCHHHHHHHHHHH
Confidence 3566778899999999983 34432 34443322 3344577777777776665544
Q ss_pred ------cCCeEEEeCCCCCCHHHHHHHHHHHHH
Q 027740 58 ------TGKIINIKKGQFCASSVMVNSAEKVRL 84 (219)
Q Consensus 58 ------~gkPVilstG~~~t~~ei~~A~e~i~~ 84 (219)
++.-++|.-+-+ +=+||.+|+..+..
T Consensus 129 ~~T~~n~~~~lnia~~Yg-gR~EI~~Avr~ia~ 160 (253)
T 3sgv_B 129 ALTAGNTGLTLNIAANYG-GRWDIVQGVRQLAE 160 (253)
T ss_dssp HHHTTCCSCEEEEESSCC-HHHHHHHHHHHHHH
T ss_pred HHhccCCCeEEEEEecCC-CHHHHHHHHHHHHH
Confidence 467888888888 78888888887754
No 446
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=55.98 E-value=1.3e+02 Score=28.09 Aligned_cols=58 Identities=12% Similarity=-0.037 Sum_probs=38.4
Q ss_pred cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC---CcEEEEeeecCCCCCCCCCC-CCCChHHHHH
Q 027740 117 ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG---VDGVFMEVHDDPLNAPVDGP-TQWPLRNLEE 192 (219)
Q Consensus 117 ~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG---A~GlvIEkH~t~d~a~~D~~-~sl~p~el~~ 192 (219)
.+..||+ |.|+ ..-++.|...| ||=+.+ -++.|....+|.. ..+.++.+++
T Consensus 107 ~~~iiG~-S~ht-----------------------~eea~~A~~~G~~~aDYv~~-Gpvf~T~tK~~~~~~~~G~~~l~~ 161 (540)
T 3nl6_A 107 PDMVIGW-SVGF-----------------------PEEVDELSKMGPDMVDYIGV-GTLFPTLTKKNPKKAPMGTAGAIR 161 (540)
T ss_dssp TTSEEEE-EECS-----------------------HHHHHHHHHTCC--CCEEEE-SCCSCCCCCC----CCCHHHHHHH
T ss_pred CCCEEEE-ECCC-----------------------HHHHHHHHHcCCCCCCEEEE-cCCCCCCCCCCcCCCCCCHHHHHH
Confidence 4677888 7787 34567888999 994333 5666666666654 5677888888
Q ss_pred HHHHHHH
Q 027740 193 LLEELVA 199 (219)
Q Consensus 193 lv~~ir~ 199 (219)
+.+.+++
T Consensus 162 i~~~~~~ 168 (540)
T 3nl6_A 162 VLDALER 168 (540)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8776644
No 447
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=55.86 E-value=1.1e+02 Score=27.51 Aligned_cols=91 Identities=13% Similarity=-0.009 Sum_probs=58.4
Q ss_pred CCeEEEeCCC--------CCCHHHHHHHHHHHHH-cCCCcEEEEeecCC---C--CCCCCCccchhHHHHHh-c--CCCE
Q 027740 59 GKIINIKKGQ--------FCASSVMVNSAEKVRL-AGNPNVMVCERGTM---F--GYNDLIVDPRNLEWMRE-A--NCPV 121 (219)
Q Consensus 59 gkPVilstG~--------~~t~~ei~~A~e~i~~-~Gn~~i~L~~cgs~---~--~~~~~~~nl~~i~~lk~-~--~~pV 121 (219)
+.||.++-.. +.+++|....++.+.+ .|..-|.+..++.. | ++.....+...+..+|+ + .+||
T Consensus 242 ~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPV 321 (419)
T 3l5a_A 242 NFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPL 321 (419)
T ss_dssp TCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCE
T ss_pred CeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeE
Confidence 5699998654 3479999999999998 88876666554320 2 11111134456677777 5 5899
Q ss_pred EEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeec
Q 027740 122 VADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHD 172 (219)
Q Consensus 122 ~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~ 172 (219)
+.... .+. +..+..+++. ||++++=+-+
T Consensus 322 I~~Gg--------------------I~t--~e~Ae~~L~~-aDlVaiGR~~ 349 (419)
T 3l5a_A 322 IASGG--------------------INS--PESALDALQH-ADMVGMSSPF 349 (419)
T ss_dssp EECSS--------------------CCS--HHHHHHHGGG-CSEEEESTHH
T ss_pred EEECC--------------------CCC--HHHHHHHHHh-CCcHHHHHHH
Confidence 87322 111 4566777777 9988876654
No 448
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=55.70 E-value=12 Score=32.45 Aligned_cols=43 Identities=19% Similarity=0.147 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 152 PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
...+++|..+||. ++=.|.- -+|+..|++|+.++++++.||+.
T Consensus 37 a~~A~~~~~AGAa--ivHlH~R----d~~G~ps~d~~~~~e~~~~IR~~ 79 (284)
T 3chv_A 37 VESTQEAFEAGAA--IAHCHVR----NDDGTPSSDPDRFARLTEGLHTH 79 (284)
T ss_dssp HHHHHHHHHHTCC--EEEECEE----CTTSCEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCc--EEEeeec----CCCCCcCCCHHHHHHHHHHHHHh
Confidence 4557788999998 9988843 13578899999999999999875
No 449
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=55.66 E-value=9.3 Score=33.22 Aligned_cols=43 Identities=16% Similarity=0.280 Sum_probs=35.7
Q ss_pred HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 152 PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
...+++|..+||. ++=.|.-- .|+..|++|+-|+++++.||+.
T Consensus 37 a~~A~~a~~AGAa--ivHlHvRd----~~G~ps~d~~~~~e~~~~IR~~ 79 (282)
T 2y7e_A 37 AKEAKACFEAGAR--VIHLHIRE----DDGRPSQRLDRFQEAISAIREV 79 (282)
T ss_dssp HHHHHHHHHHTEE--EEEECEEC----TTSCEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCc--EEEEeecC----CCCCcCCCHHHHHHHHHHHHHH
Confidence 4557788999997 88888432 6788999999999999999875
No 450
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=55.62 E-value=43 Score=27.61 Aligned_cols=120 Identities=11% Similarity=0.018 Sum_probs=68.4
Q ss_pred ccHHHHh---hhccccccCCCCCC--CHHHHHHHHh-cCC-eEEEeCCCCCCHH-HHHHHHHHHHHcCCCcEEEEeecCC
Q 027740 27 VQCEEVG---KVADIIQIPAFLCR--QTDLLVAAAK-TGK-IINIKKGQFCASS-VMVNSAEKVRLAGNPNVMVCERGTM 98 (219)
Q Consensus 27 ~~~~~l~---~~vd~~kI~S~~~~--n~~LL~~~a~-~gk-PVilstG~~~t~~-ei~~A~e~i~~~Gn~~i~L~~cgs~ 98 (219)
+.++.+. ++++++|+|-.... -.+.++.+.+ .|+ +|++-.=.+ ++. -+..+++.+.+. +.+-+|+..
T Consensus 14 ~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~~~~~~~VflDlK~~-DI~nTv~~~~~~~~~~---d~vTVh~~~- 88 (222)
T 4dbe_A 14 LSYQVLKEMENELYGIKVGLPLVLDLGVDKTRELLIGLDVEEIIVDFKLA-DIGYIMKSIVERLSFA---NSFIAHSFI- 88 (222)
T ss_dssp CCHHHHHHHGGGCSEEEEEHHHHHHHCHHHHHHHHHTCCCSEEEEEEEEC-SCHHHHHHHHTTCTTC---SEEEEESTT-
T ss_pred HHHHHHHHhCCcCcEEEECHHHHHhhCHHHHHHHHHhcCCCeEEEEeeec-chHHHHHHHHHHHHhC---CEEEEEcCc-
Confidence 4444444 45889999987766 4678888888 699 999866555 554 444455444332 788888732
Q ss_pred CCCCCCCccchhHHHHHhcCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEE
Q 027740 99 FGYNDLIVDPRNLEWMREANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 168 (219)
Q Consensus 99 ~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvI 168 (219)
+|. ..+. .++...++.+.-|.+-.+-+. |+ ....++...+..|..+|.+|+|.
T Consensus 89 -G~~-~~~~-~a~~~~~~~~~~v~vLts~s~--~~------------~~~~~~~~~a~~a~~~g~~GvV~ 141 (222)
T 4dbe_A 89 -GVK-GSLD-ELKRYLDANSKNLYLVAVMSH--EG------------WSTLFADYIKNVIREISPKGIVV 141 (222)
T ss_dssp -CTT-TTHH-HHHHHHHHTTCEEEEEEECSS--TT------------CCCTTHHHHHHHHHHHCCSEEEE
T ss_pred -CcH-HHHH-HHHHHHHhcCCcEEEEEeCCC--cc------------hHHHHHHHHHHHHHHhCCCEEEE
Confidence 212 1121 233333334433333233332 11 11233456777888899999875
No 451
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=55.30 E-value=59 Score=26.86 Aligned_cols=109 Identities=10% Similarity=0.098 Sum_probs=61.2
Q ss_pred HHHHHHHhcCCCeEeeeCCcccHHHHhhh-cc-ccccCCCCCC-CHHHHHHHHhcCCeEEEeCCCC---------CCHHH
Q 027740 7 ILEKVKIAYDIPIVTDVHETVQCEEVGKV-AD-IIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQF---------CASSV 74 (219)
Q Consensus 7 ~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd-~~kI~S~~~~-n~~LL~~~a~~gkPVilstG~~---------~t~~e 74 (219)
...+..+..|+|++++. ...++.+..+ +. +--++.+... |..+.+.+.+.|..|+...+.. .+.++
T Consensus 89 ~~~~l~~~~~iPv~~~~--~A~~~al~~~g~~rvglltpy~~~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~ 166 (240)
T 3ixl_A 89 LTVAMREATGLPCTTMS--TAVLNGLRALGVRRVALATAYIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTAT 166 (240)
T ss_dssp HHHHHHHHHSSCEEEHH--HHHHHHHHHTTCSEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHH
T ss_pred HHHHHHhccCCCEECHH--HHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHH
Confidence 34455566788888743 3344444443 22 2222333333 3444466667788877654432 14667
Q ss_pred HHHHHHH-H-HHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCC
Q 027740 75 MVNSAEK-V-RLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVT 126 (219)
Q Consensus 75 i~~A~e~-i-~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~ 126 (219)
+..+++. + ...| -+.+++-|+- ++. +..++.+.+ +++|| +|+.
T Consensus 167 ~~~~~~~~l~~~~~-adaivL~CT~---l~~----l~~i~~le~~lg~PV-ids~ 212 (240)
T 3ixl_A 167 LVDLCVRAFEAAPD-SDGILLSSGG---LLT----LDAIPEVERRLGVPV-VSSS 212 (240)
T ss_dssp HHHHHHHHHHTSTT-CSEEEEECTT---SCC----TTHHHHHHHHHSSCE-EEHH
T ss_pred HHHHHHHHhhcCCC-CCEEEEeCCC---Cch----hhhHHHHHHHhCCCE-EeHH
Confidence 7777776 5 3344 4677777953 221 234566766 89999 6643
No 452
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=55.18 E-value=34 Score=29.55 Aligned_cols=30 Identities=3% Similarity=-0.154 Sum_probs=15.5
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNS 78 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A 78 (219)
|.+.++++.+ ++.||..-=... +.+++...
T Consensus 223 ~~~~~~~l~~~~~ipia~dE~~~-~~~~~~~~ 253 (345)
T 2zad_A 223 DIEGLKFVRFHSPFPVAADESAR-TKFDVMRL 253 (345)
T ss_dssp CHHHHHHHHHHSSSCEEESTTCC-SHHHHHHH
T ss_pred cHHHHHHHHHhCCCCEEEeCCcC-CHHHHHHH
Confidence 4444444433 456666654444 66655544
No 453
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=55.11 E-value=1e+02 Score=26.58 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=63.9
Q ss_pred cHHHHhhh-cccc----ccCCCCCCCH-----HHHHHHHhcCCeEEEeCCC----CCCHHHHHHHHHHHHHcCCCcEEEE
Q 027740 28 QCEEVGKV-ADII----QIPAFLCRQT-----DLLVAAAKTGKIINIKKGQ----FCASSVMVNSAEKVRLAGNPNVMVC 93 (219)
Q Consensus 28 ~~~~l~~~-vd~~----kI~S~~~~n~-----~LL~~~a~~gkPVilstG~----~~t~~ei~~A~e~i~~~Gn~~i~L~ 93 (219)
+++...+. +|.+ .+|+..-... .+.+++.+.|.|+++-+.. .-+.+-+..+++...+.|.. ++=.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD-~VKt 208 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQ-IIKT 208 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCS-EEEE
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCC-EEEe
Confidence 45555454 5543 3555432211 4455566679999997643 11444466788877777875 3222
Q ss_pred eecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeee
Q 027740 94 ERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 94 ~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH 171 (219)
- | +. ..+..+.+ ..+||++- |+...+..++ ......|+..||+|+++=+-
T Consensus 209 ~----~--t~-----e~~~~vv~~~~vPVv~~----------------GG~~~~~~~~-l~~v~~ai~aGA~Gv~vGRn 259 (295)
T 3glc_A 209 Y----Y--VE-----KGFERIVAGCPVPIVIA----------------GGKKLPEREA-LEMCWQAIDQGASGVDMGRN 259 (295)
T ss_dssp E----C--CT-----TTHHHHHHTCSSCEEEE----------------CCSCCCHHHH-HHHHHHHHHTTCSEEEESHH
T ss_pred C----C--CH-----HHHHHHHHhCCCcEEEE----------------ECCCCCHHHH-HHHHHHHHHhCCeEEEeHHH
Confidence 1 3 21 23455555 67899761 1111122223 34566888999999887543
No 454
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=54.82 E-value=25 Score=31.92 Aligned_cols=54 Identities=15% Similarity=0.264 Sum_probs=38.1
Q ss_pred CEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecCCCCCCC-CCCCCCChHHHHHHHH
Q 027740 120 PVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDDPLNAPV-DGPTQWPLRNLEELLE 195 (219)
Q Consensus 120 pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~-D~~~sl~p~el~~lv~ 195 (219)
.|++||-|.. ++ ..+...--.+|++ ++..|..||-..+ .++-+..|+.+.+++.
T Consensus 174 kivvD~~nG~---------------~~-----~~~~~ll~~lG~~--v~~~~~~pDg~f~n~~~~~~~~~~l~~~v~ 228 (443)
T 3i3w_A 174 KVVVDCAHGA---------------AS-----HNFEALLDKFGIN--YVSIASNPDGLNINVGCGATCVSNIKKAVK 228 (443)
T ss_dssp EEEEECTTST---------------TT-----THHHHHHHHTTCE--EEESSCCCCSSCTTTTCSTTCHHHHHHHHH
T ss_pred eEEEECCCCh---------------HH-----HHHHHHHHHcCCE--EEEECCccCCCCCCCCCCCCCHHHHHHHHH
Confidence 7999999985 23 3445556789998 7788888887654 4455667777766554
No 455
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=54.79 E-value=65 Score=28.65 Aligned_cols=99 Identities=11% Similarity=0.012 Sum_probs=62.0
Q ss_pred HHHHHHHhcC--CeEEEe--CCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh---cCCCEE
Q 027740 50 DLLVAAAKTG--KIINIK--KGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE---ANCPVV 122 (219)
Q Consensus 50 ~LL~~~a~~g--kPVils--tG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~---~~~pV~ 122 (219)
+.++++-+.| ..|.++ .+...+++.+.+.++.+.+. ...|.||.-... ..|. ++ ..-+..+++ .++|++
T Consensus 118 ~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~-~~P~-~~-~~lv~~l~~~~~~~~~i~ 193 (382)
T 2ztj_A 118 EVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGLADTVGV-ATPR-QV-YALVREVRRVVGPRVDIE 193 (382)
T ss_dssp HHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEEEETTSC-CCHH-HH-HHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEecCCCCC-CCHH-HH-HHHHHHHHHhcCCCCeEE
Confidence 4455556677 766665 44444677777777777777 666666665432 2232 11 133555665 367898
Q ss_pred EcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEeeecC
Q 027740 123 ADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEVHDD 173 (219)
Q Consensus 123 ~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEkH~t 173 (219)
+ +.|-. .| +...-+++|+..||+ .|+.-+.
T Consensus 194 ~-H~Hnd---------------~G---lAvAN~laAv~aGa~--~vd~tv~ 223 (382)
T 2ztj_A 194 F-HGHND---------------TG---CAIANAYEAIEAGAT--HVDTTIL 223 (382)
T ss_dssp E-EEBCT---------------TS---CHHHHHHHHHHTTCC--EEEEBGG
T ss_pred E-EeCCC---------------cc---HHHHHHHHHHHhCCC--EEEEccc
Confidence 8 77753 23 225568899999998 8887654
No 456
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=54.74 E-value=23 Score=28.51 Aligned_cols=89 Identities=13% Similarity=0.078 Sum_probs=55.1
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhh-hccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC----------CHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGK-VADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC----------ASS 73 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~-~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~----------t~~ 73 (219)
+.-+.+.+++.|..++....+.. .+...+ -+|.+-+.+.+.. .+.++.+.+.+.||++=..... ..+
T Consensus 27 ~~gi~~~a~~~g~~~~~~~~~~~-~~~~~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~ 104 (277)
T 3cs3_A 27 LEGIKKGLALFDYEMIVCSGKKS-HLFIPEKMVDGAIILDWTFP-TKEIEKFAERGHSIVVLDRTTEHRNIRQVLLDNRG 104 (277)
T ss_dssp HHHHHHHHHTTTCEEEEEESTTT-TTCCCTTTCSEEEEECTTSC-HHHHHHHHHTTCEEEESSSCCCSTTEEEEEECHHH
T ss_pred HHHHHHHHHHCCCeEEEEeCCCC-HHHHhhccccEEEEecCCCC-HHHHHHHHhcCCCEEEEecCCCCCCCCEEEeCcHH
Confidence 45677888999987765332211 111112 3665555444433 4667888788999887433211 124
Q ss_pred HHHHHHHHHHHcCCCcEEEEee
Q 027740 74 VMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
-...+++++.+.|..+|.++..
T Consensus 105 ~~~~a~~~L~~~G~~~i~~i~~ 126 (277)
T 3cs3_A 105 GATQAIEQFVNVGSKKVLLLSG 126 (277)
T ss_dssp HHHHHHHHHHHTTCSCEEEEEC
T ss_pred HHHHHHHHHHHcCCceEEEEeC
Confidence 4567889999999999988753
No 457
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=54.74 E-value=80 Score=27.28 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=24.5
Q ss_pred ccccccCCCCCCCHHHH----HHHHhcCCeEEEeCCCC
Q 027740 36 ADIIQIPAFLCRQTDLL----VAAAKTGKIINIKKGQF 69 (219)
Q Consensus 36 vd~~kI~S~~~~n~~LL----~~~a~~gkPVilstG~~ 69 (219)
-.-|-||+++++|.+.+ +++.+.+-||||....+
T Consensus 15 ~~~yAv~AfNv~n~e~~~avl~AAe~~~sPvIlq~s~~ 52 (286)
T 1gvf_A 15 ANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPG 52 (286)
T ss_dssp HHTCCEEEEECCSHHHHHHHHHHHHHHTCCCEEEECTT
T ss_pred HCCCEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChh
Confidence 44577888999987554 45555788888877765
No 458
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=54.73 E-value=19 Score=30.07 Aligned_cols=76 Identities=12% Similarity=0.017 Sum_probs=56.7
Q ss_pred HHHHHHHHhcCC------CeEeeeCCcccHHHHhhh-ccccccCCCCCC-CHHHHHHHHhc--CCeEEEeCCCCCCHHHH
Q 027740 6 KILEKVKIAYDI------PIVTDVHETVQCEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKT--GKIINIKKGQFCASSVM 75 (219)
Q Consensus 6 ~~L~~~~~~~Gi------~~~tt~~d~~~~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~--gkPVilstG~~~t~~ei 75 (219)
+.+.++|+++|+ +++--++.++++....++ +|++|+=..... -..+|+++..- +.|++ -+|-- +++
T Consensus 96 ~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~i~~~-ptGGI-~~~-- 171 (217)
T 3lab_A 96 PELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQLKCFPASAIGGAKLLKAWSGPFPDIQFC-PTGGI-SKD-- 171 (217)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEE-EBSSC-CTT--
T ss_pred HHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEECccccccCHHHHHHHHhhhcCceEE-EeCCC-CHH--
Confidence 467889999999 999999999999998888 999998665544 47889988763 35555 55544 443
Q ss_pred HHHHHHHHHcCC
Q 027740 76 VNSAEKVRLAGN 87 (219)
Q Consensus 76 ~~A~e~i~~~Gn 87 (219)
++.+++. .|+
T Consensus 172 -N~~~~l~-aGa 181 (217)
T 3lab_A 172 -NYKEYLG-LPN 181 (217)
T ss_dssp -THHHHHH-STT
T ss_pred -HHHHHHH-CCC
Confidence 4556664 465
No 459
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=54.65 E-value=94 Score=27.13 Aligned_cols=82 Identities=12% Similarity=0.116 Sum_probs=53.6
Q ss_pred ccccccCCC-CCC-CHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhH
Q 027740 36 ADIIQIPAF-LCR-QTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNL 111 (219)
Q Consensus 36 vd~~kI~S~-~~~-n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i 111 (219)
.+.+||-.+ ++. ..+.++++-+. +.|+.+.-..+-|++|....++.+...| +..+|- |++. -|+..+
T Consensus 163 f~~iKik~g~~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~---i~~iEq----P~~~--~~~~~~ 233 (384)
T 2pgw_A 163 ERVFYLKVGRGEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYD---IEFIEQ----PTVS--WSIPAM 233 (384)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGC---CSEEEC----CSCT--TCHHHH
T ss_pred CCEEEECcCCCHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcC---CCEEeC----CCCh--hhHHHH
Confidence 456665332 222 34556655432 6899999777779999888888777665 334452 3432 367888
Q ss_pred HHHHh-cCCCEEEcCC
Q 027740 112 EWMRE-ANCPVVADVT 126 (219)
Q Consensus 112 ~~lk~-~~~pV~~ds~ 126 (219)
..+++ .++||..|-+
T Consensus 234 ~~l~~~~~iPI~~de~ 249 (384)
T 2pgw_A 234 AHVREKVGIPIVADQA 249 (384)
T ss_dssp HHHHHHCSSCEEESTT
T ss_pred HHHHhhCCCCEEEeCC
Confidence 88887 8999988644
No 460
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=54.51 E-value=76 Score=25.66 Aligned_cols=92 Identities=9% Similarity=-0.142 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHhcCCCeEee-eC----Ccc-----------cHHHHhhh-ccccccCCCCCCC-----------H----H
Q 027740 3 EGLKILEKVKIAYDIPIVTD-VH----ETV-----------QCEEVGKV-ADIIQIPAFLCRQ-----------T----D 50 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt-~~----d~~-----------~~~~l~~~-vd~~kI~S~~~~n-----------~----~ 50 (219)
..++.+++.++++||.+.+- ++ ++. .++...++ ++.+.+.++.... . .
T Consensus 48 ~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~ 127 (286)
T 3dx5_A 48 ETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRM 127 (286)
T ss_dssp HHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHH
Confidence 35677888889999998763 22 111 23333334 5555543332210 1 2
Q ss_pred HHHHHHhcCCeEEEeCCCC---CCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 027740 51 LLVAAAKTGKIINIKKGQF---CASSVMVNSAEKVRLAGNPNVMVCERGT 97 (219)
Q Consensus 51 LL~~~a~~gkPVilstG~~---~t~~ei~~A~e~i~~~Gn~~i~L~~cgs 97 (219)
+.+.+.+.|..+.+.+... .|++++ .+.+...+.+++-+|-...
T Consensus 128 l~~~a~~~Gv~l~lE~~~~~~~~~~~~~---~~l~~~~~~~~vg~~~D~~ 174 (286)
T 3dx5_A 128 ICELFAQHNMYVLLETHPNTLTDTLPST---LELLGEVDHPNLKINLDFL 174 (286)
T ss_dssp HHHHHHHTTCEEEEECCTTSTTSSHHHH---HHHHHHHCCTTEEEEEEHH
T ss_pred HHHHHHHhCCEEEEecCCCcCcCCHHHH---HHHHHhcCCCCeEEEeccc
Confidence 3333445577777776532 134443 3344444556676666554
No 461
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=54.41 E-value=27 Score=29.31 Aligned_cols=90 Identities=11% Similarity=-0.015 Sum_probs=58.1
Q ss_pred HHHHHHHHHhcCCCeEeeeC--Cccc----HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEe-CC---CC---C
Q 027740 5 LKILEKVKIAYDIPIVTDVH--ETVQ----CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIK-KG---QF---C 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~--d~~~----~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVils-tG---~~---~ 70 (219)
+.-+.+.++++|..++.... +++. ++.+.+. +|.+-+.+.+. +.+.++.+.+.+.||++= .. .. .
T Consensus 87 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~-~~~~~~~l~~~~iPvV~i~~~~~~~~~~~V 165 (344)
T 3kjx_A 87 LTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEH-SEAARAMLDAAGIPVVEIMDSDGKPVDAMV 165 (344)
T ss_dssp HHHHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCC-CHHHHHHHHHCSSCEEEEEECSSCCSSEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCC-CHHHHHHHHhCCCCEEEEeCCCCCCCCCEE
Confidence 45678889999988766443 3321 2222233 77666654443 457888888899998864 11 00 0
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
..+-...|++++.+.|..+|.++..
T Consensus 166 ~~D~~~~~~~a~~~L~~~G~~~I~~i~~ 193 (344)
T 3kjx_A 166 GISHRRAGREMAQAILKAGYRRIGFMGT 193 (344)
T ss_dssp EECHHHHHHHHHHHHHHHTCCSCCEEES
T ss_pred EECcHHHHHHHHHHHHHCCCCeEEEEec
Confidence 2345667888999999999888753
No 462
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=54.29 E-value=9.8 Score=33.53 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=35.5
Q ss_pred HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 027740 152 PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~ 199 (219)
...+++|..+||. ++=.|.- ...|+..|++|+.|+++++.||+
T Consensus 35 a~~A~~~~~AGAa--ivHlHvR---dp~dG~ps~d~~~~~e~~~~IR~ 77 (311)
T 3e49_A 35 AQASIGAAEAGAA--VIHLHAR---DPRDGRPTQDPAAFAEFLPRIKS 77 (311)
T ss_dssp HHHHHHHHHHTCS--EEEECEE---CTTTCCEECCHHHHTTHHHHHHH
T ss_pred HHHHHHHHHcCCc--EEEEeec---CCCCCCcCCCHHHHHHHHHHHHH
Confidence 4557788999998 9988853 22478899999999999999997
No 463
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=54.29 E-value=62 Score=27.66 Aligned_cols=147 Identities=12% Similarity=0.084 Sum_probs=0.0
Q ss_pred HHHHhhhccccccCCCCCC--CHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHH-------HHHHHHcCCCcEEEEeecC
Q 027740 29 CEEVGKVADIIQIPAFLCR--QTDLLVAAAKT--GKIINIKKGQFCASSVMVNS-------AEKVRLAGNPNVMVCERGT 97 (219)
Q Consensus 29 ~~~l~~~vd~~kI~S~~~~--n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A-------~e~i~~~Gn~~i~L~~cgs 97 (219)
++-..+++|++|+|-+... ..+.|++.-.. .--|-+++| +|+-|..-. ++.+++-|-.-|=+-.-..
T Consensus 32 Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~G--GTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i 109 (251)
T 1qwg_A 32 LKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPG--GTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSS 109 (251)
T ss_dssp HHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEEC--HHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSS
T ss_pred HHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECC--cHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcc
Q ss_pred CCCCCCCCccchhHHHHHhcCCCEEE-----cC--CCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEEee
Q 027740 98 MFGYNDLIVDPRNLEWMREANCPVVA-----DV--THSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 98 ~~~~~~~~~nl~~i~~lk~~~~pV~~-----ds--~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvIEk 170 (219)
..|.+. =++.|..+++.++.|.. |+ +... ..+.....+.....+||+-+|||.
T Consensus 110 ~l~~~~---~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~-----------------~~~~~I~~~~~~LeAGA~~ViiEa 169 (251)
T 1qwg_A 110 DISLEE---RNNAIKRAKDNGFMVLTEVGKKMPDKDKQL-----------------TIDDRIKLINFDLDAGADYVIIEG 169 (251)
T ss_dssp CCCHHH---HHHHHHHHHHTTCEEEEEECCSSHHHHTTC-----------------CHHHHHHHHHHHHHHTCSEEEECC
T ss_pred cCCHHH---HHHHHHHHHHCCCEEeeeccccCCcccCCC-----------------CHHHHHHHHHHHHHCCCcEEEEee
Q ss_pred ecCCCC-CCCCCCCCCChHHHHHHHHHH
Q 027740 171 HDDPLN-APVDGPTQWPLRNLEELLEEL 197 (219)
Q Consensus 171 H~t~d~-a~~D~~~sl~p~el~~lv~~i 197 (219)
.-.-.. .+.|..-++..+.+.++++.+
T Consensus 170 rEsG~~iGi~~~~g~~r~d~v~~i~~~l 197 (251)
T 1qwg_A 170 RESGKGKGLFDKEGKVKENELDVLAKNV 197 (251)
T ss_dssp TTTCCSSTTBCTTSCBCHHHHHHHHTTS
T ss_pred ecccCCcccCCCCCCCcHHHHHHHHHhC
No 464
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=54.06 E-value=40 Score=30.27 Aligned_cols=63 Identities=17% Similarity=-0.030 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcCCC---eEeeeC-CcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCC
Q 027740 5 LKILEKVKIAYDIP---IVTDVH-ETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQ 68 (219)
Q Consensus 5 l~~L~~~~~~~Gi~---~~tt~~-d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~ 68 (219)
...|++.+++.|+. +.-..+ +.+++..+-..+|++-.+|..-.-..++++++ .|+|||.-.|.
T Consensus 419 ~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma-~G~Pvv~~~g~ 485 (568)
T 2vsy_A 419 DARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALW-TGCPVLTTPGE 485 (568)
T ss_dssp HHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHH-TTCCEEBCCCS
T ss_pred HHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHh-CCCCEEeccCC
Confidence 46788888999986 333333 33455555556899999998744577777775 59999994443
No 465
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=53.96 E-value=24 Score=31.34 Aligned_cols=31 Identities=6% Similarity=-0.207 Sum_probs=19.0
Q ss_pred CHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHH
Q 027740 48 QTDLLVAAAK-TGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 48 n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~ 79 (219)
|.+.++++.+ ++.||..-=... +.+++..++
T Consensus 259 d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i 290 (398)
T 2pp0_A 259 DIEGHAQLAAALDTPIATGEMLT-SFREHEQLI 290 (398)
T ss_dssp CHHHHHHHHHHCSSCEEECTTCC-SHHHHHHHH
T ss_pred hHHHHHHHHhhCCCCEEecCCcC-CHHHHHHHH
Confidence 5565655554 567877665555 776666543
No 466
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=53.88 E-value=46 Score=26.89 Aligned_cols=93 Identities=10% Similarity=-0.041 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhcCCCeEee----eCCc-----c----cHHHHhhh-ccccccCCCCCC---CH-HHHHHHHhcCCeEEEe
Q 027740 4 GLKILEKVKIAYDIPIVTD----VHET-----V----QCEEVGKV-ADIIQIPAFLCR---QT-DLLVAAAKTGKIINIK 65 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt----~~d~-----~----~~~~l~~~-vd~~kI~S~~~~---n~-~LL~~~a~~gkPVils 65 (219)
.++.+++.++++||.+.+. .|++ + .++...++ ++.+.+.++... ++ .+.+.+.+.|..+.+.
T Consensus 52 ~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~lE 131 (264)
T 1yx1_A 52 DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLVE 131 (264)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCEEEEe
Confidence 3678899999999987653 2221 1 22233344 666666554432 33 3445555678999999
Q ss_pred CCCC---CCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 027740 66 KGQF---CASSVMVNSAEKVRLAGNPNVMVCERGT 97 (219)
Q Consensus 66 tG~~---~t~~ei~~A~e~i~~~Gn~~i~L~~cgs 97 (219)
+... .+++++...++.+.+.|.+ +-+|--..
T Consensus 132 n~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~g 165 (264)
T 1yx1_A 132 NDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDIG 165 (264)
T ss_dssp CCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEETT
T ss_pred cCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEehh
Confidence 8753 2567887777777666665 77776553
No 467
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=53.83 E-value=79 Score=26.13 Aligned_cols=90 Identities=12% Similarity=-0.031 Sum_probs=54.3
Q ss_pred HHHHHHHHHhcCCCeEeee------CCcc-c---HHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEe--CCC---
Q 027740 5 LKILEKVKIAYDIPIVTDV------HETV-Q---CEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIK--KGQ--- 68 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~------~d~~-~---~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVils--tG~--- 68 (219)
+.-+.+.+++.|..+.... .++. + ++.+.+. +|.+-+++..-...+.++.+.+.+.|+++- +..
T Consensus 63 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ip~V~~~~~~~~~~ 142 (342)
T 1jx6_A 63 IASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNITTPVR 142 (342)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECCTTCCHHHHHHHHHHHHHTTCSEEEECCSSSTTHHHHHHHHHHCSCEEEEETCCSCBG
T ss_pred HHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEEeCChHhHHHHHHHHHHcCCCEEEEecCCCccc
Confidence 4567788899997665432 2332 2 2333333 787777432222467788888889987643 210
Q ss_pred ----CC--------CHHHHHHHHHHHHHc-C-CCcEEEEe
Q 027740 69 ----FC--------ASSVMVNSAEKVRLA-G-NPNVMVCE 94 (219)
Q Consensus 69 ----~~--------t~~ei~~A~e~i~~~-G-n~~i~L~~ 94 (219)
.. ..+-...+++++.+. | ..+|.++.
T Consensus 143 ~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~Gg~~~I~~i~ 182 (342)
T 1jx6_A 143 EWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLY 182 (342)
T ss_dssp GGTTSCCSEEEECCHHHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred ccccCCCceEEecCcHHHHHHHHHHHHHHcCCCceEEEEE
Confidence 10 124456788889887 6 88888775
No 468
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=53.76 E-value=46 Score=23.91 Aligned_cols=69 Identities=16% Similarity=0.235 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh--cCCCEEEcCCCCCCCCCCCccCCCCccCCCCc
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHSLQQPAGKKLDGGGVASGGLR 148 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~--~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~ 148 (219)
+.+|... .+.. ...+++++.... +. .-.+..+..+|+ .++||++-+++. .
T Consensus 49 ~~~~a~~---~l~~-~~~dlii~d~~l----~~-~~g~~~~~~l~~~~~~~~ii~~s~~~-----------------~-- 100 (152)
T 3eul_A 49 DGAAALE---LIKA-HLPDVALLDYRM----PG-MDGAQVAAAVRSYELPTRVLLISAHD-----------------E-- 100 (152)
T ss_dssp SHHHHHH---HHHH-HCCSEEEEETTC----SS-SCHHHHHHHHHHTTCSCEEEEEESCC-----------------C--
T ss_pred CHHHHHH---HHHh-cCCCEEEEeCCC----CC-CCHHHHHHHHHhcCCCCeEEEEEccC-----------------C--
Confidence 4555444 4443 357899998642 21 113455666766 467887755554 2
Q ss_pred ccHHHHHHHHHHcCCcEEEEeee
Q 027740 149 ELIPCIARTAIAVGVDGVFMEVH 171 (219)
Q Consensus 149 ~~~~~~~~aAvalGA~GlvIEkH 171 (219)
......+..+||+| ++-|-
T Consensus 101 ---~~~~~~~~~~g~~~-~l~Kp 119 (152)
T 3eul_A 101 ---PAIVYQALQQGAAG-FLLKD 119 (152)
T ss_dssp ---HHHHHHHHHTTCSE-EEETT
T ss_pred ---HHHHHHHHHcCCCE-EEecC
Confidence 45567889999998 44443
No 469
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=53.65 E-value=25 Score=31.14 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=52.6
Q ss_pred HHHHHHHHHhc--CCCeEeeeCCcccHHHH-------hhh-ccccccCCCCCCCHHHHHHHHh-cCCeEEEeCCCCCCHH
Q 027740 5 LKILEKVKIAY--DIPIVTDVHETVQCEEV-------GKV-ADIIQIPAFLCRQTDLLVAAAK-TGKIINIKKGQFCASS 73 (219)
Q Consensus 5 l~~L~~~~~~~--Gi~~~tt~~d~~~~~~l-------~~~-vd~~kI~S~~~~n~~LL~~~a~-~gkPVilstG~~~t~~ 73 (219)
++.++.+.+.. ++++..+...-.+.+.. +++ ++++--+ ..-.|.+.++++.+ ++.||..-=... +.+
T Consensus 194 ~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P-~~~~~~~~~~~l~~~~~iPIa~dE~~~-~~~ 271 (393)
T 2og9_A 194 IARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEEP-LDAYDHEGHAALALQFDTPIATGEMLT-SAA 271 (393)
T ss_dssp HHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECC-SCTTCHHHHHHHHHHCSSCEEECTTCC-SHH
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEECC-CCcccHHHHHHHHHhCCCCEEeCCCcC-CHH
Confidence 44555555554 46666665433333322 222 3333222 12236666666654 578888766655 777
Q ss_pred HHHHHHHHHHHcCCCcEEEE---eecCCCCCCCCCccchhHHHHHh-cCCCEE
Q 027740 74 VMVNSAEKVRLAGNPNVMVC---ERGTMFGYNDLIVDPRNLEWMRE-ANCPVV 122 (219)
Q Consensus 74 ei~~A~e~i~~~Gn~~i~L~---~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~ 122 (219)
++..+++ .|.-+++.+ .||.- .....+..+.+ +++++.
T Consensus 272 ~~~~~i~----~~~~d~v~ik~~~~GGi-------t~~~~i~~~A~~~gi~~~ 313 (393)
T 2og9_A 272 EHGDLIR----HRAADYLMPDAPRVGGI-------TPFLKIASLAEHAGLMLA 313 (393)
T ss_dssp HHHHHHH----TTCCSEECCCHHHHTSH-------HHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHH----CCCCCEEeeCccccCCH-------HHHHHHHHHHHHcCCEEe
Confidence 7665543 454455543 34431 11233333444 788874
No 470
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=53.62 E-value=35 Score=29.72 Aligned_cols=109 Identities=15% Similarity=0.040 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i 82 (219)
+-+..+.+.++++|+++..=..+ ..+.+......+ | ....+++...+-.+..+.+.-+...+.+++....+
T Consensus 202 ~~l~~~~~~A~~~g~~v~~H~~e--~~~~~~~~~~~~--g---~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~-- 272 (451)
T 4dyk_A 202 DKLEQILVLTEELDASIQMHVHE--TAFEVEQAMERN--G---ERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVE-- 272 (451)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESC--CHHHHHHHHHHH--S---SCHHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHH--
T ss_pred HHHHHHHHHHHHcCCcEEEEeCC--CHHHHHHHHHHh--C---CCHHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHH--
Confidence 34677778888888887774433 223333222221 1 22355666666667778888888888888665443
Q ss_pred HHcCCCcEEEEeecCC-CCCCCCCccchhHHHHHhcCCCEEEcCCCC
Q 027740 83 RLAGNPNVMVCERGTM-FGYNDLIVDPRNLEWMREANCPVVADVTHS 128 (219)
Q Consensus 83 ~~~Gn~~i~L~~cgs~-~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs 128 (219)
.| +.+.+|.++ +... .....+..+.+.+++|.+-+|+.
T Consensus 273 --~g---~~v~~~p~s~~~~~---~~~~~~~~~~~~Gv~v~lgtD~~ 311 (451)
T 4dyk_A 273 --TN---SSVIHCPESNLKLA---SGFCPVEKLWQAGVNVAIGTDGA 311 (451)
T ss_dssp --HT---CEEEECHHHHHHTT---CCCCCHHHHHHHTCCEEECCCCG
T ss_pred --cC---CEEEEChhhhhhcc---CCcccHHHHHhCCCeEEEECCCC
Confidence 33 556666542 1111 11233455555788998877775
No 471
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=53.57 E-value=23 Score=31.54 Aligned_cols=32 Identities=13% Similarity=0.068 Sum_probs=18.2
Q ss_pred CCHHHHHHHHh-cCCeEEEeCCCCCCHHHHHHHH
Q 027740 47 RQTDLLVAAAK-TGKIINIKKGQFCASSVMVNSA 79 (219)
Q Consensus 47 ~n~~LL~~~a~-~gkPVilstG~~~t~~ei~~A~ 79 (219)
.|.+.++++.+ ++.||..-=... +.+++..++
T Consensus 248 ~d~~~~~~l~~~~~iPIa~dE~~~-~~~~~~~~i 280 (410)
T 2qq6_A 248 ENLDALAEVRRSTSTPICAGENVY-TRFDFRELF 280 (410)
T ss_dssp TCHHHHHHHHTTCSSCEEECTTCC-SHHHHHHHH
T ss_pred hhHHHHHHHHhhCCCCEEeCCCcC-CHHHHHHHH
Confidence 35555665554 466776655544 666665543
No 472
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=53.52 E-value=43 Score=30.82 Aligned_cols=144 Identities=15% Similarity=0.134 Sum_probs=90.1
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcc-------cHHHHhhh----ccccccCCCCCCCHH--------------HHHHHHhc
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETV-------QCEEVGKV----ADIIQIPAFLCRQTD--------------LLVAAAKT 58 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~-------~~~~l~~~----vd~~kI~S~~~~n~~--------------LL~~~a~~ 58 (219)
|+.-+++....+|=|++-+++-|. -.+.+.++ +|++|=-- ++.|++ +-++-++|
T Consensus 148 GI~g~R~~lg~~~RPl~gtiiKPklGLs~~~~a~~~ye~~~GGlDfiKDDE-~~~~q~f~p~~eRv~~v~eai~rA~~eT 226 (432)
T 3nwr_A 148 GVAGTRALTDVKDRPMIGTIIKPNVGLSAAETAALVRELCEAGVDFIKDDE-VCANPAHAPLAERVRAVMSEVRRYRERS 226 (432)
T ss_dssp HHHHHHHHHTCCSSCEEEEECSSSSCCCHHHHHHHHHHHHHHTCSEEECCT-TCSSCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCceEEEeeccccCCCHHHHHHHHHHHHhcCCceeECCC-CCCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 677888888889999999999885 22223332 67776432 233332 33455668
Q ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcC-CCCCCCCCCCc
Q 027740 59 GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADV-THSLQQPAGKK 136 (219)
Q Consensus 59 gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds-~Hs~~~~~~~~ 136 (219)
|...+..-....+.+|+.+=++++++.|.+ ++++.... .-+.++..|++ +++|+-+=. =|+.-.++
T Consensus 227 Ge~k~y~~NiT~~~~em~~Ra~~a~e~G~~--~~mvd~~~-------~G~~a~~~l~r~~~~~lh~HrA~hga~~r~--- 294 (432)
T 3nwr_A 227 GRPVMVAFNITDDLDAMRRHAELVEREGGS--CVMASINW-------CGFSAIQSLRRTTPLVLHAHRNGYGMMSRD--- 294 (432)
T ss_dssp SCCCEEEEECCSCHHHHHHHHHHHHHTTCC--EEEEEHHH-------HCHHHHHHHHHHCCSEEEEECTTTTTTTSS---
T ss_pred CCcceEEeecCCCHHHHHHHHHHHHHcCCC--EEEEeccC-------CCHHHHHHHHhcCCceEEECcCcccccccC---
Confidence 988877777667999999999999999985 44554322 24567788887 888876511 13211110
Q ss_pred cCCCCccCCCCcccHHHHHHHHHHcCCcEEEE
Q 027740 137 LDGGGVASGGLRELIPCIARTAIAVGVDGVFM 168 (219)
Q Consensus 137 ~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvI 168 (219)
+. -|.. ....+...--.|+|++..
T Consensus 295 -----~~-~Gi~--~~vl~Kl~RlaG~D~ih~ 318 (432)
T 3nwr_A 295 -----PA-LGMS--FQAYQTLWRLSGVDHMHV 318 (432)
T ss_dssp -----TT-EEEC--HHHHHHHHHTBTCSEEEE
T ss_pred -----CC-CCcC--HHHHHHHHHHcCCCeeec
Confidence 00 1221 223566777889996544
No 473
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=53.07 E-value=45 Score=23.41 Aligned_cols=78 Identities=8% Similarity=-0.098 Sum_probs=47.5
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcc-cHHHHhhh-ccccccCCCCCCCHHHHHHHHhc--CCeEEEeCCCCCCHHHHHHHHH
Q 027740 5 LKILEKVKIAYDIPIVTDVHETV-QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKT--GKIINIKKGQFCASSVMVNSAE 80 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~-~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~--gkPVilstG~~~t~~ei~~A~e 80 (219)
...|.+..++.|..+. ...+.. .++.+.+. .|++- -.++.-.++++.+-+. ..||++=++.. +.+....+.
T Consensus 31 ~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~dlvi--~~~~~g~~~~~~l~~~~~~~~ii~ls~~~-~~~~~~~~~- 105 (137)
T 2pln_A 31 GGEIEKGLNVKGFMAD-VTESLEDGEYLMDIRNYDLVM--VSDKNALSFVSRIKEKHSSIVVLVSSDNP-TSEEEVHAF- 105 (137)
T ss_dssp HHHHHHHHHHTTCEEE-EESCHHHHHHHHHHSCCSEEE--ECSTTHHHHHHHHHHHSTTSEEEEEESSC-CHHHHHHHH-
T ss_pred HHHHHHHHHHcCcEEE-EeCCHHHHHHHHHcCCCCEEE--EcCccHHHHHHHHHhcCCCccEEEEeCCC-CHHHHHHHH-
Confidence 4566777777888765 444443 34445544 45443 3344557788877765 67899888877 666655543
Q ss_pred HHHHcCCCcE
Q 027740 81 KVRLAGNPNV 90 (219)
Q Consensus 81 ~i~~~Gn~~i 90 (219)
..|...+
T Consensus 106 ---~~g~~~~ 112 (137)
T 2pln_A 106 ---EQGADDY 112 (137)
T ss_dssp ---HTTCSEE
T ss_pred ---HcCCcee
Confidence 3465443
No 474
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=52.97 E-value=70 Score=27.85 Aligned_cols=139 Identities=9% Similarity=0.054 Sum_probs=78.0
Q ss_pred HHhhh-ccccccCCCCCCC--HHHHHHHHhc-----CCe-EEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCC--
Q 027740 31 EVGKV-ADIIQIPAFLCRQ--TDLLVAAAKT-----GKI-INIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMF-- 99 (219)
Q Consensus 31 ~l~~~-vd~~kI~S~~~~n--~~LL~~~a~~-----gkP-VilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~-- 99 (219)
.|.+. ++.+-+|++-... ...++++++. ..| +-+.. ...+..+++.|++ .|.+.+.+.-..|..
T Consensus 50 ~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~-l~~~~~~i~~a~~----~g~~~v~i~~~~s~~~~ 124 (337)
T 3ble_A 50 LLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILG-FVDGNKTVDWIKD----SGAKVLNLLTKGSLHHL 124 (337)
T ss_dssp HHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEE-ESSTTHHHHHHHH----HTCCEEEEEEECSHHHH
T ss_pred HHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEE-EccchhhHHHHHH----CCCCEEEEEEecCHHHH
Confidence 34444 6666776665432 3556666653 222 22211 1112335555544 577777776654421
Q ss_pred ----CCCCCCccc----hhHHHHHhcCCCEEEcCCC---CCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcCCcEEEE
Q 027740 100 ----GYNDLIVDP----RNLEWMREANCPVVADVTH---SLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVGVDGVFM 168 (219)
Q Consensus 100 ----~~~~~~~nl----~~i~~lk~~~~pV~~ds~H---s~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalGA~GlvI 168 (219)
+...+ -++ ..+...|+.+..|.++..+ +. .-..+++..++..+..+||+-+.
T Consensus 125 ~~~~~~s~~-e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~Ga~~i~- 187 (337)
T 3ble_A 125 EKQLGKTPK-EFFTDVSFVIEYAIKSGLKINVYLEDWSNGF---------------RNSPDYVKSLVEHLSKEHIERIF- 187 (337)
T ss_dssp HHHTCCCHH-HHHHHHHHHHHHHHHTTCEEEEEEETHHHHH---------------HHCHHHHHHHHHHHHTSCCSEEE-
T ss_pred HHHhCCCHH-HHHHHHHHHHHHHHHCCCEEEEEEEECCCCC---------------cCCHHHHHHHHHHHHHcCCCEEE-
Confidence 11100 012 2233334468888887666 30 01134566778889999998322
Q ss_pred eeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 169 EVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 169 EkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
++|..-.++|.+..++++.+++.
T Consensus 188 ---------l~DT~G~~~P~~v~~lv~~l~~~ 210 (337)
T 3ble_A 188 ---------LPDTLGVLSPEETFQGVDSLIQK 210 (337)
T ss_dssp ---------EECTTCCCCHHHHHHHHHHHHHH
T ss_pred ---------EecCCCCcCHHHHHHHHHHHHHh
Confidence 46888889999999999988764
No 475
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=52.96 E-value=28 Score=30.01 Aligned_cols=64 Identities=14% Similarity=0.047 Sum_probs=38.6
Q ss_pred HHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCC--cEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEc
Q 027740 52 LVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNP--NVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVAD 124 (219)
Q Consensus 52 L~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~--~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~d 124 (219)
++.+.++|+||++-+|..+.-. . ..++.+++.|.+ +++++||-.+ -++.....+.+.|+-++++
T Consensus 154 ~~lA~~~glPv~iH~~~~~r~a-~-e~l~iL~~~g~~~~~~~i~H~f~~-------~~~e~a~~~~~~G~~i~~~ 219 (330)
T 2ob3_A 154 ARASLATGVPVTTHTAASQRDG-E-QQAAIFESEGLSPSRVCIGHSDDT-------DDLSYLTALAARGYLIGLD 219 (330)
T ss_dssp HHHHHHHCCCEEEECCGGGTHH-H-HHHHHHHHTTCCGGGEEECSGGGC-------CCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhCCeEEEECCCCCCCH-H-HHHHHHHHcCcCcccEEEeCCCCC-------CCHHHHHHHHhCCCEEEeC
Confidence 5556678999999997321222 2 455666666653 5689999521 1333333333357778885
No 476
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=52.83 E-value=1.5e+02 Score=27.92 Aligned_cols=50 Identities=20% Similarity=0.201 Sum_probs=38.8
Q ss_pred cCCCeEeeeCCcccHHHHhhh-ccccc-cCCCCCCCHHHHHHHHhc-CCeEEEe
Q 027740 15 YDIPIVTDVHETVQCEEVGKV-ADIIQ-IPAFLCRQTDLLVAAAKT-GKIINIK 65 (219)
Q Consensus 15 ~Gi~~~tt~~d~~~~~~l~~~-vd~~k-I~S~~~~n~~LL~~~a~~-gkPVils 65 (219)
.++++.-+-+.++-++...+. ++++- |.++. ....++..+++. |.|+++.
T Consensus 310 ~~vpISIDT~~a~VaeaAl~aGadIINDVsg~~-~d~~m~~vva~~~~~~vVlm 362 (545)
T 2bmb_A 310 DKVILSIDTYRSNVAKEAIKVGVDIINDISGGL-FDSNMFAVIAENPEICYILS 362 (545)
T ss_dssp GGEEEEEECCCHHHHHHHHHTTCCEEEETTTTS-SCTTHHHHHHTCTTSEEEEE
T ss_pred CCCeEEEeCCcHHHHHHHHHcCCCEEEeCCCCc-CChHHHHHHHHhCCCeEEEE
Confidence 488888899999888887777 77764 44433 345788999999 9999996
No 477
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=52.56 E-value=61 Score=26.57 Aligned_cols=90 Identities=14% Similarity=0.032 Sum_probs=57.4
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--cc-c---HHHHhhh-ccccccCCCCCC-CHHHHHHHHhcCCeEEEeCCCC-----C-
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TV-Q---CEEVGKV-ADIIQIPAFLCR-QTDLLVAAAKTGKIINIKKGQF-----C- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~-~---~~~l~~~-vd~~kI~S~~~~-n~~LL~~~a~~gkPVilstG~~-----~- 70 (219)
+.-+.+.++++|..++....+ ++ + ++.+.+. +|.+-+.+.+.. ..+.++.+.+.|.||++=.... .
T Consensus 22 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~ 101 (330)
T 3uug_A 22 GNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRNSGDVS 101 (330)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCCCSCTTCC
T ss_pred HHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCCCCCCCcee
Confidence 456788899999987654433 22 2 2223233 787777666543 4678888989999998743211 0
Q ss_pred ------CHHHHHHHHHHHHH-------cCCCcEEEEe
Q 027740 71 ------ASSVMVNSAEKVRL-------AGNPNVMVCE 94 (219)
Q Consensus 71 ------t~~ei~~A~e~i~~-------~Gn~~i~L~~ 94 (219)
...-...+++++.+ .|..+|.++.
T Consensus 102 ~~V~~D~~~~g~~a~~~l~~~~~~~~~~G~~~i~~i~ 138 (330)
T 3uug_A 102 YYATFDNFQVGVLQATSITDKLGLKDGKGPFNIELFG 138 (330)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHTGGGTCCCEEEEECB
T ss_pred EEEEeCHHHHHHHHHHHHHHHhcccCCCCceEEEEEE
Confidence 12344567778887 6887887764
No 478
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=52.37 E-value=62 Score=23.19 Aligned_cols=73 Identities=16% Similarity=0.274 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh--cCCCEEEcCCCCCCCCCCCccCCCCccCCCCc
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHSLQQPAGKKLDGGGVASGGLR 148 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~--~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~ 148 (219)
+.++.. +.+. ....+++++.... +.. -.+..+..+++ .++||++-+++. .
T Consensus 39 ~~~~a~---~~l~-~~~~dlii~D~~l----~~~-~g~~~~~~l~~~~~~~~ii~ls~~~-----------------~-- 90 (153)
T 3cz5_A 39 DAGEAY---RLYR-ETTPDIVVMDLTL----PGP-GGIEATRHIRQWDGAARILIFTMHQ-----------------G-- 90 (153)
T ss_dssp SHHHHH---HHHH-TTCCSEEEECSCC----SSS-CHHHHHHHHHHHCTTCCEEEEESCC-----------------S--
T ss_pred CHHHHH---HHHh-cCCCCEEEEecCC----CCC-CHHHHHHHHHHhCCCCeEEEEECCC-----------------C--
Confidence 455544 3343 3467899998532 111 13455666776 368887745543 2
Q ss_pred ccHHHHHHHHHHcCCcEEEEeeecCCC
Q 027740 149 ELIPCIARTAIAVGVDGVFMEVHDDPL 175 (219)
Q Consensus 149 ~~~~~~~~aAvalGA~GlvIEkH~t~d 175 (219)
......+...||+| ++.|-++++
T Consensus 91 ---~~~~~~~~~~g~~~-~l~kp~~~~ 113 (153)
T 3cz5_A 91 ---SAFALKAFEAGASG-YVTKSSDPA 113 (153)
T ss_dssp ---HHHHHHHHHTTCSE-EEETTSCTT
T ss_pred ---HHHHHHHHHCCCcE-EEecCCCHH
Confidence 45567889999997 666655443
No 479
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=52.29 E-value=67 Score=26.31 Aligned_cols=93 Identities=9% Similarity=-0.019 Sum_probs=52.0
Q ss_pred HHHHHHHHhcCCCeEe---ee-CC-cccHHHHhhh-----ccccccCCC----CC---CCHHHHHHHHhcCCeEEEeCCC
Q 027740 6 KILEKVKIAYDIPIVT---DV-HE-TVQCEEVGKV-----ADIIQIPAF----LC---RQTDLLVAAAKTGKIINIKKGQ 68 (219)
Q Consensus 6 ~~L~~~~~~~Gi~~~t---t~-~d-~~~~~~l~~~-----vd~~kI~S~----~~---~n~~LL~~~a~~gkPVilstG~ 68 (219)
.++.+.++++.=.|.. -+ .+ ...++.++++ +..++|+.. .+ .-.++++.+.+.|+||++-++.
T Consensus 78 ~~~~~~~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 157 (307)
T 2f6k_A 78 DDGKSLAQQYPDQLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPNE 157 (307)
T ss_dssp HHHHHHHHHCTTTEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECCC
T ss_pred HHHHHHHHhCccceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCCC
Confidence 4566777766433322 12 23 1234444332 334466543 22 2478999999999999998886
Q ss_pred CCC-------------H----HHHHHHH-----HHHHHcCCCcEEEEeecCC
Q 027740 69 FCA-------------S----SVMVNSA-----EKVRLAGNPNVMVCERGTM 98 (219)
Q Consensus 69 ~~t-------------~----~ei~~A~-----e~i~~~Gn~~i~L~~cgs~ 98 (219)
... + +.....+ +.+....+-++++.|||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~P~l~~v~~H~gg~ 209 (307)
T 2f6k_A 158 PAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFEKYPNIKVIIPHAGAF 209 (307)
T ss_dssp CSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHHHCTTCEEEESGGGTT
T ss_pred CccccccccccccchhccchHHHHHHHHHHHhcCccccCCCCeEEccCCCcc
Confidence 532 1 1122222 2445545567999999853
No 480
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=52.26 E-value=24 Score=30.41 Aligned_cols=136 Identities=13% Similarity=0.045 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i 82 (219)
+.++++.+.+.+.|+.+=-++||..++..+..+++--.+......|+-| | +..|+..+++.+...++.+
T Consensus 125 ~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~Gl~~~p~~~~~vl-------G----v~~g~~~~~~~l~~~~~~l 193 (275)
T 3no5_A 125 ELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAAGAIVGPLHIQFVM-------G----IKNAMPVDREVLEFYVQTL 193 (275)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHHHTSSCSSCEEEEEE-------C----CTTSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeeEEEEEcHHHHHHHHHHHHCCCCCCCeeEEEEe-------C----CCCCCCCCHHHHHHHHHHH
Confidence 4678888889999999999999999999877665544443322222211 1 3568888998888887777
Q ss_pred HHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEE-cCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHc
Q 027740 83 RLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVA-DVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAV 161 (219)
Q Consensus 83 ~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~-ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAval 161 (219)
.+.+. +...+-|+. ...+..+.....+.--|+.||+ |.-+. .+ +.-...+.++|..+...+-.+
T Consensus 194 ~~~~~-~~~w~v~g~----Gr~~~p~~~~A~~~GGhvRVGlEDnl~~--~~--------G~~A~sNa~lV~~~~~i~~~~ 258 (275)
T 3no5_A 194 KRLSP-DATWTGAGI----GRHQLTMARWSLELGGHCRTGLEDNVRL--DK--------NTLAPSNAALVRQVAELCEEY 258 (275)
T ss_dssp HHHCT-TCEEEEEEC----GGGHHHHHHHHHHHTCEEEESTTTCCBS--SS--------SCBCSCHHHHHHHHHHHHHHT
T ss_pred HhCCC-CCeEEEEec----CHhhHHHHHHHHHhCCCeEEcCCcceeC--CC--------CCCCCCHHHHHHHHHHHHHHc
Confidence 55443 333444443 2222333332222225788988 32222 01 111124456777777777788
Q ss_pred CCc
Q 027740 162 GVD 164 (219)
Q Consensus 162 GA~ 164 (219)
|-.
T Consensus 259 gr~ 261 (275)
T 3no5_A 259 GRP 261 (275)
T ss_dssp TCC
T ss_pred CCC
Confidence 863
No 481
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=52.16 E-value=56 Score=26.57 Aligned_cols=41 Identities=7% Similarity=0.066 Sum_probs=31.4
Q ss_pred HHHHHHHHHhcCCCeEeeeCCcccHHHHhhh-ccccccCCCC
Q 027740 5 LKILEKVKIAYDIPIVTDVHETVQCEEVGKV-ADIIQIPAFL 45 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~-vd~~kI~S~~ 45 (219)
+..+.+.++++|+.++.++.+..+.+.+.++ .+++-+.+++
T Consensus 100 ~~~~~~~a~~~Gl~~iv~v~~~~e~~~~~~~~~~~i~~~~~~ 141 (219)
T 2h6r_A 100 IEAVINKCKNLGLETIVCTNNINTSKAVAALSPDCIAVEPPE 141 (219)
T ss_dssp HHHHHHHHHHHTCEEEEEESSSHHHHHHTTTCCSEEEECCCC
T ss_pred HHHHHHHHHHCCCeEEEEeCCchHHHHHHhCCCCEEEEEecc
Confidence 6778888999999999999999888777665 4555444433
No 482
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=52.01 E-value=1e+02 Score=25.52 Aligned_cols=90 Identities=9% Similarity=-0.008 Sum_probs=56.5
Q ss_pred HHHHHHHHHhcCCCeEeeeCC--cc----cHHHHhhh-ccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCC-------
Q 027740 5 LKILEKVKIAYDIPIVTDVHE--TV----QCEEVGKV-ADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFC------- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~d--~~----~~~~l~~~-vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~------- 70 (219)
+.-+.+++++.|..++....+ ++ .++.+.+. +|.+-+.+.+. +.+.++.+.+.+.||++=.....
T Consensus 82 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~-~~~~~~~l~~~~iPvV~~~~~~~~~~~~~V 160 (332)
T 2o20_A 82 TRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSL-DEKIRTSLKNSRTPVVLVGTIDGDKEIPSV 160 (332)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSSCC-CHHHHHHHHHHCCCEEEESCCCTTSCSCEE
T ss_pred HHHHHHHHHHcCCEEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCCCC-CHHHHHHHHhCCCCEEEEccccCCCCCCEE
Confidence 456778889999887654332 21 12333333 77665554433 35677777788999876432110
Q ss_pred ---CHHHHHHHHHHHHHcCCCcEEEEee
Q 027740 71 ---ASSVMVNSAEKVRLAGNPNVMVCER 95 (219)
Q Consensus 71 ---t~~ei~~A~e~i~~~Gn~~i~L~~c 95 (219)
...-...+++++.+.|..+|.++..
T Consensus 161 ~~D~~~~~~~a~~~L~~~G~~~I~~i~~ 188 (332)
T 2o20_A 161 NIDYHLAAYQSTKKLIDSGNKKIAYIMG 188 (332)
T ss_dssp ECCHHHHHHHHHHHHHHTTCSSEEEECS
T ss_pred EeChHHHHHHHHHHHHHCCCCeEEEEeC
Confidence 1234567889999999999988753
No 483
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=51.70 E-value=41 Score=29.73 Aligned_cols=77 Identities=12% Similarity=0.069 Sum_probs=46.0
Q ss_pred HHhcCCCeEeeeCCcccHHHHhhhcc---ccccCCC-CCCCHHHHHHHHhcC--CeEEEeCCCCCCHHHHHHHHHHHHHc
Q 027740 12 KIAYDIPIVTDVHETVQCEEVGKVAD---IIQIPAF-LCRQTDLLVAAAKTG--KIINIKKGQFCASSVMVNSAEKVRLA 85 (219)
Q Consensus 12 ~~~~Gi~~~tt~~d~~~~~~l~~~vd---~~kI~S~-~~~n~~LL~~~a~~g--kPVilstG~~~t~~ei~~A~e~i~~~ 85 (219)
.+++|+.++-+|+.+.+.+.+.++-. -+.|... .+.+..-++.+-+.+ --|++|.+..+++.+...+++..++.
T Consensus 218 l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 297 (401)
T 2hzg_A 218 LDAAGVLWLEEPFDAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQAR 297 (401)
T ss_dssp HHHTTCSEEECCSCTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCCccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHc
Confidence 56678888888777777766655432 1233333 334444444444333 35667776666777777777777777
Q ss_pred CCC
Q 027740 86 GNP 88 (219)
Q Consensus 86 Gn~ 88 (219)
|-+
T Consensus 298 g~~ 300 (401)
T 2hzg_A 298 GIT 300 (401)
T ss_dssp TCE
T ss_pred CCE
Confidence 654
No 484
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=51.49 E-value=15 Score=32.37 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 027740 152 PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~ 199 (219)
...+++|..+||. ++=.|.-- ..|+..|++|+-|+++++.||+
T Consensus 35 a~~A~~~~~AGAa--ivHlHvRd---p~dG~ps~d~~~y~e~i~~IR~ 77 (314)
T 3lot_A 35 VEEAVKAAEAGAG--MVHIHARD---PKDGRPTTDVEVFRYICREIKK 77 (314)
T ss_dssp HHHHHHHHHHTCS--EEEECEEC---TTTCCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC--EEEEeecC---CCCCCcCCCHHHHHHHHHHHHh
Confidence 4557788999998 99888531 1378899999999999999998
No 485
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=51.37 E-value=99 Score=27.35 Aligned_cols=92 Identities=12% Similarity=0.000 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCeEEEeC----------CCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cC
Q 027740 50 DLLVAAAKTGKIINIKK----------GQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-AN 118 (219)
Q Consensus 50 ~LL~~~a~~gkPVilst----------G~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~ 118 (219)
.+.++++.. ||.++- +.. +.++....++.+...|..-|.+..+.....++ ...+...+..+|+ ++
T Consensus 226 aVr~avg~~--~V~vrls~~~~~~g~~~~~-~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~-~~~~~~~~~~vr~~~~ 301 (376)
T 1icp_A 226 AVANEIGSD--RVGIRISPFAHYNEAGDTN-PTALGLYMVESLNKYDLAYCHVVEPRMKTAWE-KIECTESLVPMRKAYK 301 (376)
T ss_dssp HHHHHHCGG--GEEEEECTTCCTTTCCCSC-HHHHHHHHHHHHGGGCCSEEEEECCSCCC-------CCCCSHHHHHHCC
T ss_pred HHHHHhcCC--ceEEEeccccccCCCCCCC-CHHHHHHHHHHHHHcCCCEEEEcCCcccCCCC-ccccHHHHHHHHHHcC
Q ss_pred CCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHHHHHHcC-CcEEEE
Q 027740 119 CPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIARTAIAVG-VDGVFM 168 (219)
Q Consensus 119 ~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~aAvalG-A~GlvI 168 (219)
.||+....-+ ...+..+++.| ||++++
T Consensus 302 iPvi~~G~i~-----------------------~~~a~~~l~~g~aD~V~~ 329 (376)
T 1icp_A 302 GTFIVAGGYD-----------------------REDGNRALIEDRADLVAY 329 (376)
T ss_dssp SCEEEESSCC-----------------------HHHHHHHHHTTSCSEEEE
T ss_pred CCEEEeCCCC-----------------------HHHHHHHHHCCCCcEEee
No 486
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=51.14 E-value=36 Score=24.29 Aligned_cols=73 Identities=12% Similarity=0.147 Sum_probs=40.6
Q ss_pred HHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh-cCCCEEEcCCCCCCCCCCCccCCCCccCCCCcccHHHHHH
Q 027740 78 SAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE-ANCPVVADVTHSLQQPAGKKLDGGGVASGGLRELIPCIAR 156 (219)
Q Consensus 78 A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~-~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 156 (219)
|.+.+...+..+++++.... +. .-.+..+..+|+ ...||++=++... .. .....
T Consensus 51 al~~l~~~~~~dlvilD~~l----~~-~~g~~~~~~lr~~~~~~iiil~~~~~---------------~~-----~~~~~ 105 (145)
T 3kyj_B 51 ALDKLAAQPNVDLILLDIEM----PV-MDGMEFLRHAKLKTRAKICMLSSVAV---------------SG-----SPHAA 105 (145)
T ss_dssp HHHHHHHCTTCCEEEECTTS----CC-CTTCHHHHHHHHHCCCEEC-CBSSCS---------------TT-----SSHHH
T ss_pred HHHHHhcCCCCCEEEEeCCC----CC-CCHHHHHHHHHhcCCCCeEEEEEecc---------------CC-----hHHHH
Confidence 44555555468999998643 11 113455667776 5566655333110 01 12345
Q ss_pred HHHHcCCcEEEEeeecCCCC
Q 027740 157 TAIAVGVDGVFMEVHDDPLN 176 (219)
Q Consensus 157 aAvalGA~GlvIEkH~t~d~ 176 (219)
.+...||+| +|.|-++++.
T Consensus 106 ~~~~~ga~~-~l~KP~~~~~ 124 (145)
T 3kyj_B 106 RARELGADG-VVAKPSGTVS 124 (145)
T ss_dssp HHHHTTCSC-CCBCCCSCC-
T ss_pred HHHhCCCCE-EEeCCCCHHH
Confidence 788999997 6777665543
No 487
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=51.08 E-value=9.8 Score=33.51 Aligned_cols=43 Identities=16% Similarity=0.235 Sum_probs=35.5
Q ss_pred HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 027740 152 PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVA 199 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~ 199 (219)
...+++|..+||. ++=.|.- ...|+..|++|+.|+++++.||+
T Consensus 35 a~~A~~~~~AGAa--ivHlHvR---dp~dG~ps~d~~~~~e~~~~IR~ 77 (311)
T 3e02_A 35 VKEGVAAAEAGAA--MLHLHAR---DPLNGRPSQDPDLFMRFLPQLKE 77 (311)
T ss_dssp HHHHHHHHHHTCS--EEEECEE---CTTTCCEECCHHHHTTTHHHHHH
T ss_pred HHHHHHHHHcCCc--EEEEeec---CCCCCCcCCCHHHHHHHHHHHHH
Confidence 4557788999998 9988853 22478899999999999999997
No 488
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=51.02 E-value=1.3e+02 Score=26.41 Aligned_cols=24 Identities=13% Similarity=0.001 Sum_probs=13.7
Q ss_pred HHh--cCCCeEeeeCCcccHHHHhhh
Q 027740 12 KIA--YDIPIVTDVHETVQCEEVGKV 35 (219)
Q Consensus 12 ~~~--~Gi~~~tt~~d~~~~~~l~~~ 35 (219)
.++ +|+.++-+|+.+.+++.+.++
T Consensus 213 l~~~g~~i~~iEqP~~~~~~~~~~~l 238 (389)
T 2oz8_A 213 IREAGHDLLWVEDPILRHDHDGLRTL 238 (389)
T ss_dssp HHHTTCCCSEEESCBCTTCHHHHHHH
T ss_pred HHhcCCCceEEeCCCCCcCHHHHHHH
Confidence 455 666666666655555555444
No 489
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=51.00 E-value=37 Score=27.56 Aligned_cols=41 Identities=12% Similarity=0.018 Sum_probs=32.0
Q ss_pred CCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcE
Q 027740 45 LCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNV 90 (219)
Q Consensus 45 ~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i 90 (219)
.-.|.++++++...+.||++.-|.. +.+++..+.+ .|..-+
T Consensus 59 ~~~~~~~i~~i~~~~ipvi~~Ggi~-~~~~~~~~~~----~Gad~V 99 (241)
T 1qo2_A 59 SGENLPVLEKLSEFAEHIQIGGGIR-SLDYAEKLRK----LGYRRQ 99 (241)
T ss_dssp CCTTHHHHHHGGGGGGGEEEESSCC-SHHHHHHHHH----TTCCEE
T ss_pred CchhHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHH----CCCCEE
Confidence 3467888888775689999999999 9998887655 576544
No 490
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=50.99 E-value=1.2e+02 Score=26.37 Aligned_cols=79 Identities=10% Similarity=0.097 Sum_probs=54.4
Q ss_pred cccCCCCCC-CHHHHHHHHhc---CCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHH
Q 027740 39 IQIPAFLCR-QTDLLVAAAKT---GKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM 114 (219)
Q Consensus 39 ~kI~S~~~~-n~~LL~~~a~~---gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~l 114 (219)
+|+|..+.. ....++++-+. +.++.+.-..+-+.++....++.+... ++..+|. |.+. -|+..+..+
T Consensus 164 iKvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~---~i~~iEq----P~~~--~~~~~~~~l 234 (370)
T 1chr_A 164 VKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEAL---GVELIEQ----PVGR--ENTQALRRL 234 (370)
T ss_dssp EECSSSCSHHHHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTT---TEEEEEC----CSCT--TCHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhc---CCCEEEC----CCCc--ccHHHHHHH
Confidence 567765443 45666665443 579999988887998888777777654 3777775 3333 267778888
Q ss_pred Hh-cCCCEEEcCC
Q 027740 115 RE-ANCPVVADVT 126 (219)
Q Consensus 115 k~-~~~pV~~ds~ 126 (219)
++ +++||..|=+
T Consensus 235 ~~~~~iPia~dE~ 247 (370)
T 1chr_A 235 SDNNRVAIMADES 247 (370)
T ss_dssp HHHSCSEEEESSS
T ss_pred HhhCCCCEEeCCC
Confidence 87 8899987543
No 491
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=50.91 E-value=54 Score=26.26 Aligned_cols=91 Identities=12% Similarity=0.043 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCCCeEeeeC----Ccc----cHHHHhhh-ccccccCCCCCCC-HHHHHHHHhcCCeEEEeCCCCC----
Q 027740 5 LKILEKVKIAYDIPIVTDVH----ETV----QCEEVGKV-ADIIQIPAFLCRQ-TDLLVAAAKTGKIINIKKGQFC---- 70 (219)
Q Consensus 5 l~~L~~~~~~~Gi~~~tt~~----d~~----~~~~l~~~-vd~~kI~S~~~~n-~~LL~~~a~~gkPVilstG~~~---- 70 (219)
+.-+.+.+++.|..+..... +++ .++.+.+. +|.+-+.+.+... .+.++.+.+.+.||++-.....
T Consensus 26 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~ 105 (289)
T 3brs_A 26 VEGAQMAAKEYEIKLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSGMKQDIA 105 (289)
T ss_dssp HHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEESSCCSSCCC
T ss_pred HHHHHHHHHHcCCEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCChHHhHHHHHHHHHCCCcEEEECCCCCCCcc
Confidence 45677888999988765433 222 12233333 7776665555444 3678888788999876432110
Q ss_pred -------CHHHHHHHHHHHHHc-C-CCcEEEEee
Q 027740 71 -------ASSVMVNSAEKVRLA-G-NPNVMVCER 95 (219)
Q Consensus 71 -------t~~ei~~A~e~i~~~-G-n~~i~L~~c 95 (219)
..+-...+++++.+. | ..+|.++..
T Consensus 106 ~~~V~~D~~~~g~~~~~~L~~~~G~~~~i~~i~~ 139 (289)
T 3brs_A 106 DITVATDNIQAGIRIGAVTKNLVRKSGKIGVISF 139 (289)
T ss_dssp SEEEECCHHHHHHHHHHHHHHHTSSSCEEEEEES
T ss_pred eEEEeeChHHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 124456788888887 6 888888753
No 492
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=50.69 E-value=82 Score=27.00 Aligned_cols=68 Identities=9% Similarity=0.054 Sum_probs=50.4
Q ss_pred HHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHhcCCCEEEcCCCC
Q 027740 49 TDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVADVTHS 128 (219)
Q Consensus 49 ~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs 128 (219)
.+.++++.+.++||.+-.+ ..+++..+++.+.+.|. ++.+.||... + ..+..+++.+++|.+.+.|.
T Consensus 210 ~e~l~~~~~~~~~v~iHa~---~~~~i~~~~~~~~~~g~-~~~i~H~~~~--------~-~~~~~l~~~gv~v~~~P~~~ 276 (396)
T 3ooq_A 210 MEVGEMVLRKKIPARMHAH---RADDILTAIRIAEEFGF-NLVIEHGTEA--------Y-KISKVLAEKKIPVVVGPLLT 276 (396)
T ss_dssp HHHHHHHHTTSSCEEEEEC---SHHHHHHHHHHHHHHTC-CEEEEECTTG--------G-GGHHHHHHHTCCEEECCCSS
T ss_pred HHHHHHHHcCCCcEEEEEC---chhHHHHHHHHHHHcCC-CEEEecCchH--------H-HHHHHHHHCCCCEEECcccc
Confidence 5677777788999999776 55677888888888886 4889999643 1 12566777788888877765
Q ss_pred C
Q 027740 129 L 129 (219)
Q Consensus 129 ~ 129 (219)
.
T Consensus 277 ~ 277 (396)
T 3ooq_A 277 F 277 (396)
T ss_dssp C
T ss_pred c
Confidence 3
No 493
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=50.36 E-value=66 Score=25.80 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCH--HHHHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCAS--SVMVNSAE 80 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~--~ei~~A~e 80 (219)
+-+..|.+.+++.|++++-+-+.+.. ..+. ...++ .... -+-+++.|+|..... .++ .+
T Consensus 38 ~~i~~l~~~ar~~g~pVi~t~~~~~~-------------~~~~-~~~~l-~~~~-~~~~vi~K~~~~saF~~t~L---~~ 98 (208)
T 1yac_A 38 NNVLALGDLAKYFNLPTILTTSAETG-------------PNGP-LVPEL-KAQF-PDAPYIARPGNINAWDNEDF---VK 98 (208)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESTTT-------------TTCC-BCHHH-HHHC-TTSCEEEESSCSSGGGSHHH---HH
T ss_pred HHHHHHHHHHHHcCCcEEEEEecCCC-------------CCCc-ccHHH-HhhC-CCCeEEeeCCccCCCCCchH---HH
Confidence 34667888899999999988765431 0011 11222 1110 156799998654123 233 34
Q ss_pred HHHHcCCCcEEEEeecC
Q 027740 81 KVRLAGNPNVMVCERGT 97 (219)
Q Consensus 81 ~i~~~Gn~~i~L~~cgs 97 (219)
++++.|.+++++|=.-+
T Consensus 99 ~L~~~gi~~lvi~Gv~T 115 (208)
T 1yac_A 99 AVKATGKKQLIIAGVVT 115 (208)
T ss_dssp HHHHTTCSEEEEEEBSC
T ss_pred HHHhcCCCEEEEEEecc
Confidence 57788999998876654
No 494
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=50.32 E-value=30 Score=30.41 Aligned_cols=83 Identities=12% Similarity=-0.030 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhcc--ccccCCCCCC--CHH--HHHHHHhc-CCeEEEeCCCCCCHHHHH
Q 027740 4 GLKILEKVKIAYDIPIVTDVHETVQCEEVGKVAD--IIQIPAFLCR--QTD--LLVAAAKT-GKIINIKKGQFCASSVMV 76 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd--~~kI~S~~~~--n~~--LL~~~a~~-gkPVilstG~~~t~~ei~ 76 (219)
.++++ +.+++++|.++=+|+.+++.+.+.++.. -+.|...+.. +.+ +.+.+... ---|++|-...+++.+..
T Consensus 224 a~~~~-~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~ 302 (377)
T 2pge_A 224 APQRL-KRLSQFHLHSIEQPIRQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGFHYAG 302 (377)
T ss_dssp HHHHH-HHHHTTCCSEEECCBCSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSHHHHH
T ss_pred HHHHH-HHHhcCCCcEEEccCCcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCHHHHH
Confidence 34444 5556778888888887777776666522 2455555442 333 33333322 235667766666777777
Q ss_pred HHHHHHHHcCC
Q 027740 77 NSAEKVRLAGN 87 (219)
Q Consensus 77 ~A~e~i~~~Gn 87 (219)
.+++..++.|-
T Consensus 303 ~i~~~A~~~g~ 313 (377)
T 2pge_A 303 QWIELARERGI 313 (377)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
Confidence 77777777665
No 495
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=50.30 E-value=21 Score=33.73 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=62.2
Q ss_pred HHHHHHHHHHhcC--CCeEeeeCCcccHHHHhhh---ccccccCCCCCC-----------CHHHHHHHHhcCCeEEEeCC
Q 027740 4 GLKILEKVKIAYD--IPIVTDVHETVQCEEVGKV---ADIIQIPAFLCR-----------QTDLLVAAAKTGKIINIKKG 67 (219)
Q Consensus 4 gl~~L~~~~~~~G--i~~~tt~~d~~~~~~l~~~---vd~~kI~S~~~~-----------n~~LL~~~a~~gkPVilstG 67 (219)
-+..++++.++.| +.+++-+-.++.++-+.+. .|.+-||-+|+- +-.+++++-+.||||+..|-
T Consensus 244 Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQ 323 (520)
T 3khd_A 244 DVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQ 323 (520)
T ss_dssp HHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeeh
Confidence 4667777776655 7888888888887766654 688888766553 34677778888999995444
Q ss_pred C--------CCCHHHHHHHHHHHHHcCCCcEEE
Q 027740 68 Q--------FCASSVMVNSAEKVRLAGNPNVMV 92 (219)
Q Consensus 68 ~--------~~t~~ei~~A~e~i~~~Gn~~i~L 92 (219)
| ..|-.|+-..+..+.. |..-++|
T Consensus 324 MLeSMi~~p~PTRAEvsDVanAVld-GaDavML 355 (520)
T 3khd_A 324 MLESMTKNPRPTRAEVTDVANAVLD-GTDCVML 355 (520)
T ss_dssp CCGGGGTCSSCCHHHHHHHHHHHHH-TCSEEEE
T ss_pred hhHHHhcCCCccHHHHHHHHHHHHh-CCCEEEe
Confidence 3 2378888888887764 5554555
No 496
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=50.21 E-value=53 Score=23.00 Aligned_cols=82 Identities=18% Similarity=0.226 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh--cCCCEEEcCCCCCCCCCCCccCCCCccCCCCc
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHSLQQPAGKKLDGGGVASGGLR 148 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~--~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~ 148 (219)
+..|... .+.. ..++++++.... |.. --+..+..+|+ .++||++=+++. .
T Consensus 37 ~~~~al~---~~~~-~~~dlvilD~~l----p~~-~g~~~~~~l~~~~~~~~ii~ls~~~-----------------~-- 88 (133)
T 3b2n_A 37 NGLDAMK---LIEE-YNPNVVILDIEM----PGM-TGLEVLAEIRKKHLNIKVIIVTTFK-----------------R-- 88 (133)
T ss_dssp CHHHHHH---HHHH-HCCSEEEECSSC----SSS-CHHHHHHHHHHTTCSCEEEEEESCC-----------------C--
T ss_pred CHHHHHH---HHhh-cCCCEEEEecCC----CCC-CHHHHHHHHHHHCCCCcEEEEecCC-----------------C--
Confidence 4555443 3433 357899998642 210 12345566665 468887755554 2
Q ss_pred ccHHHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHH
Q 027740 149 ELIPCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEEL 197 (219)
Q Consensus 149 ~~~~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~i 197 (219)
......+...||+| +|.|- .++++|...++.+
T Consensus 89 ---~~~~~~~~~~ga~~-~l~Kp-------------~~~~~L~~~i~~~ 120 (133)
T 3b2n_A 89 ---PGYFEKAVVNDVDA-YVLKE-------------RSIEELVETINKV 120 (133)
T ss_dssp ---HHHHHHHHHTTCSE-EEETT-------------SCHHHHHHHHHHH
T ss_pred ---HHHHHHHHHcCCcE-EEECC-------------CCHHHHHHHHHHH
Confidence 44566788999997 55553 2456666655543
No 497
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=50.18 E-value=32 Score=28.57 Aligned_cols=94 Identities=7% Similarity=-0.060 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhcCCCeEee-eC------Cc----------ccHHHHhhh-ccccccCCCCCCC----HHHHHHHHh--cC
Q 027740 4 GLKILEKVKIAYDIPIVTD-VH------ET----------VQCEEVGKV-ADIIQIPAFLCRQ----TDLLVAAAK--TG 59 (219)
Q Consensus 4 gl~~L~~~~~~~Gi~~~tt-~~------d~----------~~~~~l~~~-vd~~kI~S~~~~n----~~LL~~~a~--~g 59 (219)
.++.+++.++++||.+.+- ++ ++ ..++...++ ++.+.+|+..-.+ .+-|++++. .|
T Consensus 69 ~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~g~~~~~~~~~~~~~l~~l~~~a~G 148 (296)
T 2g0w_A 69 TDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRAEE 148 (296)
T ss_dssp CHHHHHHHHHHTTCEEEEEECBCCCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEECCCSCCCHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCceEeehhhhccccCChHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCCHHHHHHHHHHHHHHhcC
Confidence 3567899999999998762 21 11 123334445 6666666541111 122222222 58
Q ss_pred CeEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeecC
Q 027740 60 KIINIKKGQFCASSVMVNSAEKVRLAGNPNVMVCERGT 97 (219)
Q Consensus 60 kPVilstG~~~t~~ei~~A~e~i~~~Gn~~i~L~~cgs 97 (219)
..+.+.+-....+.....+++.+...+.+++-+|--..
T Consensus 149 v~l~lE~~~~~~~~~~~~~~~l~~~v~~~~vgl~~D~~ 186 (296)
T 2g0w_A 149 LIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTW 186 (296)
T ss_dssp SEEEEECCTTSSSCSHHHHHHHHHHHTCTTEEEEEEHH
T ss_pred CEEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEehh
Confidence 88888875322233334444555555667777776554
No 498
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=50.14 E-value=47 Score=29.44 Aligned_cols=109 Identities=11% Similarity=0.015 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHhcCCCeEeeeCCcccHHHHhhhccccccCCCCCCCHHHHHHHHhcCCeEEEeCCCCCCHHHHHHHHHHH
Q 027740 3 EGLKILEKVKIAYDIPIVTDVHETVQCEEVGKVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCASSVMVNSAEKV 82 (219)
Q Consensus 3 ~gl~~L~~~~~~~Gi~~~tt~~d~~~~~~l~~~vd~~kI~S~~~~n~~LL~~~a~~gkPVilstG~~~t~~ei~~A~e~i 82 (219)
+-+..+.+.++++|+++..=.. +..+.+......+ + .+....+...+-.+.++.+.-+...+.+++....
T Consensus 209 ~~l~~~~~~A~~~g~~v~iH~~--e~~~~~~~~~~~~--g---~~~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~--- 278 (472)
T 4dzh_A 209 ANFERVRMLADQLDMPVHLHTH--ETAQEVADSVAQY--G---QRPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCA--- 278 (472)
T ss_dssp HHHHHHHHHHHHHTCCEEEEES--CCHHHHHHHHHHH--S---SCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHH---
T ss_pred HHHHHHHHHHHHCCCeEEEEeC--CCHHHHHHHHHHh--C---CCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHH---
Confidence 3467777788888888766333 2333333222221 1 2235566666666778888888888888766543
Q ss_pred HHcCCCcEEEEeecCC-CCCCCCCccchhHHHHHhcCCCEEEcCCCC
Q 027740 83 RLAGNPNVMVCERGTM-FGYNDLIVDPRNLEWMREANCPVVADVTHS 128 (219)
Q Consensus 83 ~~~Gn~~i~L~~cgs~-~~~~~~~~nl~~i~~lk~~~~pV~~ds~Hs 128 (219)
+.| +.+.+|-.+ +... ..+..+..+.+.+++|.+-+|+.
T Consensus 279 -~~g---~~v~~~p~s~~~~~---~~~~~~~~~~~~Gv~v~lgtD~~ 318 (472)
T 4dzh_A 279 -ERG---VSVVHCPESNLKLA---SGFCPACALQRASVNLAIGTDGC 318 (472)
T ss_dssp -HHT---CEEEECHHHHHHTT---CCCCCHHHHHHTTCEEEECCCCT
T ss_pred -HcC---CEEEEChHHHHhcC---CCCccHHHHHHCCCCEEEECCCC
Confidence 344 456666432 1111 12233555656789999877775
No 499
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=49.88 E-value=43 Score=24.05 Aligned_cols=68 Identities=16% Similarity=0.230 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEeecCCCCCCCCCccchhHHHHHh--cCCCEEEcCCCCCCCCCCCccCCCCccCCCCc
Q 027740 71 ASSVMVNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMRE--ANCPVVADVTHSLQQPAGKKLDGGGVASGGLR 148 (219)
Q Consensus 71 t~~ei~~A~e~i~~~Gn~~i~L~~cgs~~~~~~~~~nl~~i~~lk~--~~~pV~~ds~Hs~~~~~~~~~~~~~~~~~G~~ 148 (219)
+.+|... .+. ....+++|+.... +. .-.+..+..+|+ .++||++-+++. .
T Consensus 54 ~~~~al~---~l~-~~~~dlii~D~~l----~~-~~g~~~~~~l~~~~~~~~ii~ls~~~-----------------~-- 105 (150)
T 4e7p_A 54 NGQEAIQ---LLE-KESVDIAILDVEM----PV-KTGLEVLEWIRSEKLETKVVVVTTFK-----------------R-- 105 (150)
T ss_dssp SHHHHHH---HHT-TSCCSEEEECSSC----SS-SCHHHHHHHHHHTTCSCEEEEEESCC-----------------C--
T ss_pred CHHHHHH---Hhh-ccCCCEEEEeCCC----CC-CcHHHHHHHHHHhCCCCeEEEEeCCC-----------------C--
Confidence 4555444 343 3567899988532 21 112455566666 478887755554 2
Q ss_pred ccHHHHHHHHHHcCCcEEEEee
Q 027740 149 ELIPCIARTAIAVGVDGVFMEV 170 (219)
Q Consensus 149 ~~~~~~~~aAvalGA~GlvIEk 170 (219)
......+...||++ +|.|
T Consensus 106 ---~~~~~~~~~~g~~~-~l~K 123 (150)
T 4e7p_A 106 ---AGYFERAVKAGVDA-YVLK 123 (150)
T ss_dssp ---HHHHHHHHHTTCSE-EEET
T ss_pred ---HHHHHHHHHCCCcE-EEec
Confidence 45567889999997 4544
No 500
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=49.77 E-value=14 Score=32.70 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCCcEEEEeeecCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 027740 152 PCIARTAIAVGVDGVFMEVHDDPLNAPVDGPTQWPLRNLEELLEELVAI 200 (219)
Q Consensus 152 ~~~~~aAvalGA~GlvIEkH~t~d~a~~D~~~sl~p~el~~lv~~ir~i 200 (219)
...+++|..+||. ++=.|.- ...|+..|++|+-++++++.||+.
T Consensus 51 a~~A~~a~~AGAa--ivHlHvR---d~~~G~ps~d~~~y~e~~~~IR~~ 94 (316)
T 3c6c_A 51 ADACVEAAKAGAS--VAHIHVR---DPKTGGGSRDPVLFKEVVDRVRSS 94 (316)
T ss_dssp HHHHHHHHHHTCS--EEEECEE---CTTTCCEECCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCc--EEEEeec---CCCCCCcCCCHHHHHHHHHHHHHH
Confidence 4557788999998 9988843 223678899999999999998864
Done!