BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027741
(219 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 60 YGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLF 119
Y P + GKA K E + L + PRF NLE N++++
Sbjct: 204 YSPIGRGLFWGKAIKESLPENSVLTSH------------------PRFVGENLEKNKQIY 245
Query: 120 ECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
+ ++ GCTP QLALAWV HQG+DV PIPGTTKI NL+ N+ AL VK+T E++ E+
Sbjct: 246 YRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVKLTKEDLKEI 305
Query: 180 EAIASADNVKGDRYPXXXXXXXXXXXXXADTPPL 213
D V G+ A+TPPL
Sbjct: 306 SDAVPLDEVAGE---SIHEVIAVTNWKFANTPPL 336
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 RMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH-T 64
R+KLG+QGLEVS G GCMG+S Y PE IA+I+ A N GITF DTSDIYG + +
Sbjct: 3 RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGS 62
Query: 65 NEILLGKAFKGGFRERAELATKFGI 89
NE LLGKA K RE+ ++ TKFGI
Sbjct: 63 NEELLGKALKQLPREKIQVGTKFGI 87
>pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 338
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 21/155 (13%)
Query: 60 YGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLF 119
Y P + GKA K E + L + PRF NLE N++++
Sbjct: 205 YSPIGRGLFWGKAIKESLPENSVLTSH------------------PRFVGENLEKNKQIY 246
Query: 120 ECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
+ ++ GCTP QLALAWV HQG+DV PIPGTTKI NL+ N+ AL VK+T E++ E+
Sbjct: 247 YRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVKLTKEDLKEI 306
Query: 180 EAIASADNVKGDRYPXXXXXXXXXXXXXADTPPLS 214
D V G+ A+TPPL
Sbjct: 307 SDAVPLDEVAGE---SIHEVIAVTNWKFANTPPLK 338
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 RMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH-T 64
R+KLG+QGLEVS G GCMG+S Y PE IA+I+ A N GITF DTSDIYG + +
Sbjct: 4 RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGS 63
Query: 65 NEILLGKAFKGGFRERAELATKFGI 89
NE LLGKA K RE+ ++ TKFGI
Sbjct: 64 NEELLGKALKQLPREKIQVGTKFGI 88
>pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 105 PRFQPGNLEHNQKLFECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENI 164
PRF NLE N++++ + ++ GCTP QLALAWV HQG+DV PIPGTTKI NL+ N+
Sbjct: 232 PRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNV 291
Query: 165 EALSVKITPEEMAELEAIASADNVKGDRYPXXXXXXXXXXXXXADTPPL 213
AL VK+T E++ E+ D V G+ A+TPPL
Sbjct: 292 GALKVKLTKEDLKEISDAVPLDEVAGE---SIHEVIAVTNWKFANTPPL 337
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 RMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH-T 64
R+KLG+QGLEVS G GCMG+S Y PE IA+I+ A N GITF DTSDIYG + +
Sbjct: 4 RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGS 63
Query: 65 NEILLGKAFKGGFRERAELATKFGI 89
NE LLGKA K RE+ ++ TKFGI
Sbjct: 64 NEELLGKALKQLPREKIQVGTKFGI 88
>pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member
Of A Novel Akr Subfamily With Unique Conformational
Changes During Nadph Binding
Length = 337
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 6 RMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH-T 64
R+KLG+QGLEVS G GCMG+S Y PE IA+I+ A N GITF DTSDIYG + +
Sbjct: 3 RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGS 62
Query: 65 NEILLGKAFKGGFRERAELATKFGI 89
NE LLGKA K RE ++ TKFGI
Sbjct: 63 NEELLGKALKQLPREXIQVGTKFGI 87
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 60 YGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLF 119
Y P + GKA K E + L + PRF NLE N++++
Sbjct: 204 YSPIGRGLFWGKAIKESLPENSVLTSH------------------PRFVGENLEKNKQIY 245
Query: 120 ECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
+ ++ GCTP QLALAWV HQG+DV PIPGTTKI NL+ N+ AL V +T E++ E+
Sbjct: 246 YRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVXLTKEDLKEI 305
Query: 180 EAIASADNVKGDRYPXXXXXXXXXXXXXADTPPL 213
D V G+ A+TPPL
Sbjct: 306 SDAVPLDEVAGE---SIHEVIAVTNWKFANTPPL 336
>pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo
Form)
pdb|1YNP|B Chain B, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo
Form)
pdb|1YNQ|A Chain A, Aldo-Keto Reductase Akr11c1 From Bacillus Halodurans (Holo
Form)
pdb|1YNQ|B Chain B, Aldo-Keto Reductase Akr11c1 From Bacillus Halodurans (Holo
Form)
Length = 317
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH 63
+++ +LG+ L VS G GCM + E ++ + GI +LDT+D+Y
Sbjct: 21 MKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQG 74
Query: 64 TNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDP 102
NE +GKA KG R+ LATK G GK G+ DP
Sbjct: 75 LNEQFVGKALKGR-RQDIILATKVGNRFEQGKEGWWWDP 112
>pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph
pdb|1LQA|B Chain B, Tas Protein From Escherichia Coli In Complex With Nadph
Length = 346
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 68 LLGKAFKGGFRERAELA-------TKFGIGIVDGKYGYHGDPH------LPRFQPGNLEH 114
LL ++F+ G E ++ + G G + GKY P RF + E
Sbjct: 210 LLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQ 269
Query: 115 NQKLFECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPE 174
QK +IA G P+Q+ALA+V Q + G T + L NIE+L ++++ +
Sbjct: 270 TQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSED 329
Query: 175 EMAELEAI 182
+AE+EA+
Sbjct: 330 VLAEIEAV 337
>pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto
Reductase Akr11a(Apo)
pdb|1PZ0|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto
Reductase Akr11a(Holo)
Length = 312
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 5 RRMKLGSQGLEVSAQGLG--CMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGP 62
++ KLG L+V GLG +G LY P E L+R AI +G+T LDT+ IYG
Sbjct: 2 KKAKLGKSDLQVFPIGLGTNAVGGHNLY-PNLNEETGKELVREAIRNGVTXLDTAYIYGI 60
Query: 63 HTNEILLGKAFKGGFRERAELATK 86
+E L+G+ + RE +ATK
Sbjct: 61 GRSEELIGEVLREFNREDVVIATK 84
>pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11b(Holo)
pdb|1PZ1|B Chain B, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11b(Holo)
Length = 333
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
+ G+E S GLG + E I IR A++ GIT +DT+ YG +E +
Sbjct: 6 IADTGIEASRIGLGTWAIGGTXWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEI 65
Query: 69 LGKAFKGGF-RERAELATKFGIGIVDGKYGYHGD 101
+GKA K R++ LATK + + + H +
Sbjct: 66 VGKAIKEYXKRDQVILATKTALDWKNNQLFRHAN 99
>pdb|1OG6|A Chain A, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
pdb|1OG6|B Chain B, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
pdb|1OG6|C Chain C, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
Length = 298
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH 63
V+R+ + QG E S MG L +++ I ++ G+T +D +DIYG +
Sbjct: 2 VQRITIAPQGPEFSR---FVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGY 58
Query: 64 TNEILLGKAFKGG--FRERAELATKFGIG 90
E G+A K RER E+ +K GI
Sbjct: 59 QCEAAFGEALKLAPHLRERMEIVSKCGIA 87
>pdb|1UR3|M Chain M, Crystal Structure Of The Apo Form Of The E.Coli Ydhf
Protein
Length = 319
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH 63
V+R+ + QG E S G L +++ I ++ G+T +D +DIYG +
Sbjct: 23 VQRITIAPQGPEFSR---FVXGYWRLXDWNXSARQLVSFIEEHLDLGVTTVDHADIYGGY 79
Query: 64 TNEILLGKAFKGG--FRERAELATKFGIG 90
E G+A K RER E+ +K GI
Sbjct: 80 QCEAAFGEALKLAPHLRERXEIVSKCGIA 108
>pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|B Chain B, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|C Chain C, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|D Chain D, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|E Chain E, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|F Chain F, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|G Chain G, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|H Chain H, Crystal Structure Of Yghz From E. Coli
pdb|4AST|A Chain A, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|B Chain B, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|C Chain C, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|D Chain D, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|E Chain E, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|F Chain F, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|G Chain G, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|H Chain H, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
Length = 346
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 85 TKFGIGIVDGKYGYHGDPHLPRF-QPGN----------LEHNQKLFECVNEIAANKGCTP 133
T G++ GKY +G P R + GN E N +NE+A +G +
Sbjct: 223 TPLAQGLLTGKY-LNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSM 281
Query: 134 SQLALAWVHHQGDDVCPIPGTTKIANLNENIEAL-SVKITPEEMAELE 180
+Q+AL+W+ + G ++ L EN++AL ++ + +E+A+++
Sbjct: 282 AQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQID 329
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 10 GSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYG--PHTNEI 67
G GL + A LG +G A++R A + GIT D ++ YG P + E
Sbjct: 19 GKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEE 75
Query: 68 LLGKAFK---GGFRERAELATKFGIGIVDGKYGYHG 100
G+ + +R+ ++TK G + G YG G
Sbjct: 76 NFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGG 111
>pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|B Chain B, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|C Chain C, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|D Chain D, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|E Chain E, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|F Chain F, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|G Chain G, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|H Chain H, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
Length = 366
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 13/108 (12%)
Query: 85 TKFGIGIVDGKYGYHGDPHLPRF-QPGN----------LEHNQKLFECVNEIAANKGCTP 133
T G++ GKY +G P R + GN E N +NE+A +G +
Sbjct: 243 TPLAQGLLTGKY-LNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSM 301
Query: 134 SQLALAWVHHQGDDVCPIPGTTKIANLNENIEAL-SVKITPEEMAELE 180
+Q+AL+W+ + G ++ L EN++AL ++ + +E+A+++
Sbjct: 302 AQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQID 349
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 10 GSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYG--PHTNEI 67
G GL + A LG +G A++R A + GIT D ++ YG P + E
Sbjct: 39 GKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEE 95
Query: 68 LLGKAFK---GGFRERAELATKFGIGIVDGKYGYHG 100
G+ + +R+ ++TK G + G YG G
Sbjct: 96 NFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGG 131
>pdb|1VP5|A Chain A, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase
(tm1009) From Thermotoga Maritima At 2.40 A Resolution
pdb|1VP5|B Chain B, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase
(tm1009) From Thermotoga Maritima At 2.40 A Resolution
Length = 298
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 121 CVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELE 180
+ IA G T +Q+ L W+ +G + IP T + + ENI ++T E+M E
Sbjct: 215 VLRSIAEKYGKTVAQVILRWLTQKG--IVAIPKTVRRERMKENISIFDFELTQEDM---E 269
Query: 181 AIASAD 186
IA+ D
Sbjct: 270 KIATLD 275
>pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
pdb|3ERP|B Chain B, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
Length = 353
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 122 VNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALS-VKITPEEMAELE 180
+NE+AA +G SQ+ALAWV + + G +K + + + + L+ + + E AE++
Sbjct: 287 LNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAAECAEID 346
Query: 181 AI 182
AI
Sbjct: 347 AI 348
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 27/184 (14%)
Query: 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYG- 61
T+ + G G+++ A LG + +G + AL++ A + GIT D ++ YG
Sbjct: 33 TMEYRRCGRSGVKLPAISLG---LWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGP 89
Query: 62 -PHTNEILLGKAFKGGF---RERAELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQK 117
P + E G+ + F R+ ++TK G + DG YG G +
Sbjct: 90 PPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGS-------------RKY 136
Query: 118 LFECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTK-IANLNENIEALSVKIT--PE 174
L +++ G + + HH+ D P+ T K + +L + +AL V I+ P
Sbjct: 137 LIASLDQSLKRMGLEYVDI---FYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPA 193
Query: 175 EMAE 178
++A
Sbjct: 194 DLAR 197
>pdb|4FZI|A Chain A, Crystal Structure Of Prostaglandin F Synthase From
Trypanosoma Cruzi
pdb|4FZI|B Chain B, Crystal Structure Of Prostaglandin F Synthase From
Trypanosoma Cruzi
pdb|4GIE|A Chain A, Crystal Structure Of Prostaglandin F Synthase From
Trypanosoma Cruzi Bound To Nadp
Length = 290
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 124 EIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELEAIA 183
EIA +P+Q+ + W G + IP +T + EN K+T EEM +++ +
Sbjct: 215 EIAKKHNKSPAQVVIRWDIQHG--IVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELN 272
Query: 184 SADNVKGD 191
+ D
Sbjct: 273 EDKRIGAD 280
>pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In
Complex With Cortisone
Length = 327
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
LG GL VS GLG +G + L+ A ++GI DT+++Y E++
Sbjct: 8 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVV 64
Query: 69 LGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEI 125
LG KG R + TK F G + + G H+ +LE Q E V+ +
Sbjct: 65 LGNIIKKKGWRRSSLVITTKIFAGGKAETERGL-SRKHIIEGLKASLERLQ--LEYVDVV 121
Query: 126 AANK 129
AN+
Sbjct: 122 FANR 125
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKL---------------FECVNEIAANKGCTPS 134
GIV GKY D +P + +L+ Q L + + IA GCT
Sbjct: 215 GIVSGKY----DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLP 270
Query: 135 QLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV--KITPEEMAELEAI 182
QLA+AW + G + L ENI A+ V K++ + E+++I
Sbjct: 271 QLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv
Beta-Subunit (Kcnab2)
Length = 347
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
LG GL VS GLG +G + L+ A ++GI DT+++Y E++
Sbjct: 29 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVV 85
Query: 69 LGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEI 125
LG KG R + TK F G + + G H+ +LE Q E V+ +
Sbjct: 86 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-SRKHIIEGLKASLERLQ--LEYVDVV 142
Query: 126 AANK---GCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV 169
AN+ + A H + GT++ +++ E +EA SV
Sbjct: 143 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSM-EIMEAYSV 188
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKL---------------FECVNEIAANKGCTPS 134
GIV GKY D +P + +L+ Q L + + IA GCT
Sbjct: 236 GIVSGKY----DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLP 291
Query: 135 QLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV--KITPEEMAELEAI 182
QLA+AW + G + L ENI A+ V K++ + E+++I
Sbjct: 292 QLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSI 341
>pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In
Complex With Cortisone
Length = 327
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
LG GL VS GLG +G + L+ A ++GI DT+++Y E++
Sbjct: 8 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVV 64
Query: 69 LGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEI 125
LG KG R + TK F G + + G H+ +LE Q E V+ +
Sbjct: 65 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-SRKHIIEGLKASLERLQ--LEYVDVV 121
Query: 126 AANK--GCTP-SQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV 169
AN+ TP + A H + GT++ +++ E +EA SV
Sbjct: 122 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSM-EIMEAYSV 167
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKL---------------FECVNEIAANKGCTPS 134
GIV GKY D +P + +L+ Q L + + IA GCT
Sbjct: 215 GIVSGKY----DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLP 270
Query: 135 QLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV--KITPEEMAELEAI 182
QLA+AW + G + L ENI A+ V K++ + E+++I
Sbjct: 271 QLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit
Complex
pdb|2R9R|A Chain A, Shaker Family Voltage Dependent Potassium Channel
(Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With
Beta Subunit
pdb|2R9R|G Chain G, Shaker Family Voltage Dependent Potassium Channel
(Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With
Beta Subunit
pdb|3LNM|A Chain A, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel
pdb|3LNM|C Chain C, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel
Length = 333
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
LG GL VS GLG +G + L+ A ++GI DT+++Y E++
Sbjct: 8 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVV 64
Query: 69 LGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEI 125
LG KG R + TK F G + + G H+ +LE Q E V+ +
Sbjct: 65 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-SRKHIIEGLKASLERLQ--LEYVDVV 121
Query: 126 AANK--GCTP-SQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV 169
AN+ TP + A H + GT++ +++ E +EA SV
Sbjct: 122 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSM-EIMEAYSV 167
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKL---------------FECVNEIAANKGCTPS 134
GIV GKY D +P + +L+ Q L + + IA GCT
Sbjct: 215 GIVSGKY----DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLP 270
Query: 135 QLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV--KITPEEMAELEAI 182
QLA+AW + G + L ENI A+ V K++ + E+++I
Sbjct: 271 QLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of
Voltage-Dependent K Channels
Length = 332
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
LG GL VS GLG +G + L+ A ++GI DT+++Y E++
Sbjct: 7 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVV 63
Query: 69 LGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEI 125
LG KG R + TK F G + + G H+ +LE Q E V+ +
Sbjct: 64 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-SRKHIIEGLKASLERLQ--LEYVDVV 120
Query: 126 AANK--GCTP-SQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV 169
AN+ TP + A H + GT++ +++ E +EA SV
Sbjct: 121 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSM-EIMEAYSV 166
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKL---------------FECVNEIAANKGCTPS 134
GIV GKY D +P + +L+ Q L + + IA GCT
Sbjct: 214 GIVSGKY----DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLP 269
Query: 135 QLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV--KITPEEMAELEAI 182
QLA+AW + G + L ENI A+ V K++ + E+++I
Sbjct: 270 QLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 319
>pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With
Cortisone
Length = 327
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
LG GL VS GLG +G + L+ A ++GI DT+++Y E++
Sbjct: 8 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVV 64
Query: 69 LGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEI 125
LG KG R + TK F G + + G H+ +LE Q E V+ +
Sbjct: 65 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-SRKHIIEGLKASLERLQ--LEYVDVV 121
Query: 126 AANK 129
AN+
Sbjct: 122 FANR 125
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKL---------------FECVNEIAANKGCTPS 134
GIV GKY D +P + +L+ Q L + + IA GCT
Sbjct: 215 GIVSGKY----DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLP 270
Query: 135 QLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV--KITPEEMAELEAI 182
QLA+AW + G + L ENI A+ V K++ + E+++I
Sbjct: 271 QLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|B Chain B, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|C Chain C, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|D Chain D, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
Length = 325
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
LG GL VS GLG +G + L+ A ++GI DT+++Y E++
Sbjct: 7 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVV 63
Query: 69 LGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEI 125
LG KG R + TK F G + + G H+ +LE Q E V+ +
Sbjct: 64 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-SRKHIIEGLKASLERLQ--LEYVDVV 120
Query: 126 AANK 129
AN+
Sbjct: 121 FANR 124
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKL---------------FECVNEIAANKGCTPS 134
GIV GKY D +P + +L+ Q L + + IA GCT
Sbjct: 214 GIVSGKY----DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLP 269
Query: 135 QLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV--KITPEEMAELEAI 182
QLA+AW + G + L ENI A+ V K++ + E+++I
Sbjct: 270 QLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 319
>pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium
Channel Kv1.2
Length = 367
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 9 LGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEIL 68
LG GL VS GLG +G + L+ A ++GI DT+++Y E++
Sbjct: 42 LGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVV 98
Query: 69 LGKAF--KGGFRERAELATK-FGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEI 125
LG KG R + TK F G + + G H+ +LE Q E V+ +
Sbjct: 99 LGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-SRKHIIEGLKASLERLQ--LEYVDVV 155
Query: 126 AANK--GCTP-SQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV 169
AN+ TP + A H + GT++ +++ E +EA SV
Sbjct: 156 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSM-EIMEAYSV 201
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKL---------------FECVNEIAANKGCTPS 134
GIV GKY D +P + +L+ Q L + + IA GCT
Sbjct: 249 GIVSGKY----DSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLP 304
Query: 135 QLALAWVHHQGDDVCPIPGTTKIANLNENIEALSV--KITPEEMAELEAI 182
QLA+AW + G + L ENI A+ V K++ + E+++I
Sbjct: 305 QLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 354
>pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase
(akr1a4) In Its Apo-form
pdb|4GAC|B Chain B, High Resolution Structure Of Mouse Aldehyde Reductase
(akr1a4) In Its Apo-form
Length = 324
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 121 CVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELE 180
V +A G +P+Q+ L W Q +C IP + + + +NI+ +PEEM +L+
Sbjct: 232 VVLALAEKHGRSPAQILLRW-QVQRKVIC-IPKSINPSRILQNIQVFDFTFSPEEMKQLD 289
Query: 181 AI 182
A+
Sbjct: 290 AL 291
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 10 GSQGLEVSAQGLGCMGMSALYGPPKPEPDMI-ALIRHAINSGITFLDTSDIYGPHTNEIL 68
S L + Q + +G+ G K EP + A I+HA+++G +D + +YG NE
Sbjct: 2 ASSVLLHTGQKMPLIGL----GTWKSEPGQVKAAIKHALSAGYRHIDCASVYG---NETE 54
Query: 69 LGKAFK 74
+G+A K
Sbjct: 55 IGEALK 60
>pdb|1AE4|A Chain A, Aldehyde Reductase Complexed With Cofactor And Inhibitor,
Alpha Carbon Atoms Only
Length = 325
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 121 CVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELE 180
V +A +P+Q+ L W Q +C IP + + + +NI+ +PEEM +L+
Sbjct: 233 VVQALAEKYNRSPAQILLRW-QVQRKVIC-IPKSVTPSRIPQNIQVFDFTFSPEEMKQLD 290
Query: 181 AI 182
A+
Sbjct: 291 AL 292
>pdb|1CWN|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Holoenzyme
Length = 324
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 121 CVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELE 180
V +A +P+Q+ L W Q +C IP + + + +NI+ +PEEM +L+
Sbjct: 232 VVQALAEKYNRSPAQILLRW-QVQRKVIC-IPKSVTPSRIPQNIQVFDFTFSPEEMKQLD 289
Query: 181 AI 182
A+
Sbjct: 290 AL 291
>pdb|1HQT|A Chain A, The Crystal Structure Of An Aldehyde Reductase Y50f
Mutant- Nadp Complex And Its Implications For Substrate
Binding
Length = 326
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 121 CVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELE 180
V +A +P+Q+ L W Q +C IP + + + +NI+ +PEEM +L+
Sbjct: 234 VVQALAEKYNRSPAQILLRW-QVQRKVIC-IPKSVTPSRIPQNIQVFDFTFSPEEMKQLD 291
Query: 181 AI 182
A+
Sbjct: 292 AL 293
>pdb|3CV7|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Ternary
Complex
pdb|3H4G|A Chain A, Structure Of Aldehyde Reductase Holoenzyme In Complex With
Potent Aldose Reductase Inhibitor Fidarestat:
Implications For Inhibitor Binding And Selectivity
pdb|3FX4|A Chain A, Porcine Aldehyde Reductase In Ternary Complex With
Inhibitor
Length = 325
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 121 CVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELE 180
V +A +P+Q+ L W Q +C IP + + + +NI+ +PEEM +L+
Sbjct: 233 VVQALAEKYNRSPAQILLRW-QVQRKVIC-IPKSVTPSRILQNIQVFDFTFSPEEMKQLD 290
Query: 181 AI 182
A+
Sbjct: 291 AL 292
>pdb|1M9H|A Chain A, Corynebacterium 2,5-dkgr A And Phe 22 Replaced With Tyr
(f22y), Lys 232 Replaced With Gly (k232g), Arg 238
Replaced With His (r238h)and Ala 272 Replaced With Gly
(a272g)in Presence Of Nadh Cofactor
Length = 278
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 120 ECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
E V AA G TP+Q L W +G PG+ + +L EN++ +T E+A +
Sbjct: 201 EPVTAAAAAHGKTPAQAVLRWHLQKG--FVVFPGSVRREHLEENLDVFDFDLTDTEIAAI 258
Query: 180 EAIASAD 186
+A+ D
Sbjct: 259 DAMDPGD 265
>pdb|2BGQ|A Chain A, Apo Aldose Reductase From Barley
pdb|2BGS|A Chain A, Holo Aldose Reductase From Barley
pdb|2VDG|A Chain A, Barley Aldose Reductase 1 Complex With Butanol
Length = 344
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 103 HLPRFQP-GNLEHNQKLFECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLN 161
H+ + P G+ E N V ++A TP Q+ + W +G V IP ++K +
Sbjct: 234 HITAYSPLGSSEKNLAHDPVVEKVANKLNKTPGQVLIKWALQRGTSV--IPKSSKDERIK 291
Query: 162 ENIEALSVKITPEEMAELEAIASADNV 188
ENI+ +I E+ L +I V
Sbjct: 292 ENIQVFGWEIPEEDFKVLCSIKDEKRV 318
>pdb|2ALR|A Chain A, Aldehyde Reductase
Length = 324
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 122 VNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELEA 181
V +A G +P+Q+ L W Q +C IP + + + +NI+ +PEEM +L A
Sbjct: 233 VLALAEKYGRSPAQILLRW-QVQRKVIC-IPKSITPSRILQNIKVFDFTFSPEEMKQLNA 290
Query: 182 I 182
+
Sbjct: 291 L 291
>pdb|1ZUA|X Chain X, Crystal Structure Of Akr1b10 Complexed With Nadp+ And
Tolrestat
Length = 317
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKLFE--CVNEIAANKGCTPSQLALAWVHHQGDD 147
GI Y G P P +P + L E + EIAA T +Q+ + + H +
Sbjct: 205 GITVTAYSPLGSPDRPWAKP----EDPSLLEDPKIKEIAAKHKKTAAQVLIRF--HIQRN 258
Query: 148 VCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
V IP + A + ENI+ K++ EEMA +
Sbjct: 259 VIVIPKSVTPARIVENIQVFDFKLSDEEMATI 290
>pdb|3O3R|A Chain A, Crystal Structure Of Akr1b14 In Complex With Nadp
pdb|3O3R|B Chain B, Crystal Structure Of Akr1b14 In Complex With Nadp
Length = 316
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 122 VNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
+ EIAA T +Q+ + + H +V IP + ++++ ENI+ +++ E+MA +
Sbjct: 234 IKEIAAKHKKTIAQVLIRF--HVQRNVAVIPKSVTLSHIKENIQVFDFQLSEEDMAAI 289
>pdb|3QKZ|A Chain A, Crystal Structure Of Mutant His269arg Akr1b14
pdb|3QKZ|B Chain B, Crystal Structure Of Mutant His269arg Akr1b14
Length = 316
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 122 VNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
+ EIAA T +Q+ + + H +V IP + ++ + ENI+ +++ E+MA +
Sbjct: 234 IKEIAAKHKKTIAQVLIRF--HVQRNVAVIPKSVTLSRIKENIQVFDFQLSEEDMAAI 289
>pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From
Gluconobacter Oxydans
Length = 348
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 16 VSAQGLGCMGMSA-LYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFK 74
+S LG + ++G P + + + I A++ GI +DT+ +YG +E ++G+A
Sbjct: 31 LSRVALGTWAIGGWMWGGPDDD-NGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALA 89
Query: 75 GGFRERAELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFECVNEIAANKGCTPS 134
+A +ATK G+ V G E N K+F K S
Sbjct: 90 EK-PNKAHVATKLGLHWV-----------------GEDEKNMKVFRDSRPARIRKEVEDS 131
Query: 135 --QLALAWVH----HQGDDVCPIPGTTK-IANLNEN--IEALSVK-ITPEEMAELEAIA 183
+L + + H DD PI + + + L+++ I AL V +PE+M +A
Sbjct: 132 LRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA 190
>pdb|1ZGD|A Chain A, Chalcone Reductase Complexed With Nadp+ At 1.7 Angstrom
Resolution
pdb|1ZGD|B Chain B, Chalcone Reductase Complexed With Nadp+ At 1.7 Angstrom
Resolution
Length = 312
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 120 ECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
+ + EIA G + +Q++L W++ QG V +P + +N+N+ +T E+ ++
Sbjct: 232 DMLKEIADAHGKSVAQISLRWLYEQG--VTFVPKSYDKERMNQNLRIFDWSLTKEDHEKI 289
Query: 180 EAIASADNVKGDRYP 194
I + G P
Sbjct: 290 AQIKQNRLIPGPTKP 304
>pdb|3H7U|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme
Akr4c9
Length = 335
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 97 GYHGDPHLPRFQPGNLEHNQKLFE--CVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGT 154
G H + P PG + + +N +A G +P+Q+AL W G V +P +
Sbjct: 220 GVHLSAYSPLGSPGTTWLKSDVLKNPILNMVAEKLGKSPAQVALRWGLQMGHSV--LPKS 277
Query: 155 TKIANLNENIEALSVKITPEEMAELEAIASADNVKG 190
T + EN I A+ I A V G
Sbjct: 278 TNEGRIKENFNVFDWSIPDYMFAKFAEIEQARLVTG 313
>pdb|1FRB|A Chain A, Fr-1 ProteinNADPHZOPOLRESTAT COMPLEX
Length = 315
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKLFE--CVNEIAANKGCTPSQLALAWVHHQGDD 147
GI Y G P P +P + L E + EIAA T +Q+ + + H +
Sbjct: 203 GISVTAYSPLGSPDRPSAKP----EDPSLLEDPKIKEIAAKHEKTSAQVLIRF--HIQRN 256
Query: 148 VCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
V IP + + + ENI+ +++ EEMA +
Sbjct: 257 VVVIPKSVTPSRIQENIQVFDFQLSDEEMATI 288
>pdb|1HW6|A Chain A, Crystal Structure Of Apo-2,5-Diketo-D-Gluconate Reductase
Length = 278
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 120 ECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
E V AA G TP+Q L W +G P + + L EN++ +T E+A +
Sbjct: 201 EPVTAAAAAHGKTPAQAVLRWHLQKG--FVVFPKSVRRERLEENLDVFDFDLTDTEIAAI 258
Query: 180 EAIASAD 186
+A+ D
Sbjct: 259 DAMDPGD 265
>pdb|1A80|A Chain A, Native 2,5-Diketo-D-Gluconic Acid Reductase A From
Corynbacterium Sp. Complexed With Nadph
Length = 277
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 120 ECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
E V AA G TP+Q L W +G P + + L EN++ +T E+A +
Sbjct: 200 EPVTAAAAAHGKTPAQAVLRWHLQKG--FVVFPKSVRRERLEENLDVFDFDLTDTEIAAI 257
Query: 180 EAIASAD 186
+A+ D
Sbjct: 258 DAMDPGD 264
>pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved
By Molecular Replacement
pdb|1MZR|B Chain B, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved
By Molecular Replacement
Length = 296
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 120 ECVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
+ + ++A G TP+Q+ + W H + IP + + + EN + ++ +E+ E+
Sbjct: 221 KVIRDLADKYGKTPAQIVIRW--HLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEI 278
>pdb|1C9W|A Chain A, Cho Reductase With Nadp+
Length = 315
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 90 GIVDGKYGYHGDPHLPRFQPGNLEHNQKLFE--CVNEIAANKGCTPSQLALAWVHHQGDD 147
GI Y G P+ P +P + L E + EIAA T +Q+ + + H +
Sbjct: 203 GITVTAYSPLGSPNRPWAKP----EDPSLLEDPKIKEIAAKHKKTSAQVLIRF--HIQRN 256
Query: 148 VCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
V IP + A ++EN + +++ +EMA +
Sbjct: 257 VVVIPKSVTPARIHENFQVFDFQLSDQEMATI 288
>pdb|3KRB|A Chain A, Structure Of Aldose Reductase From Giardia Lamblia At
1.75a Resolution
pdb|3KRB|B Chain B, Structure Of Aldose Reductase From Giardia Lamblia At
1.75a Resolution
Length = 334
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 14/114 (12%)
Query: 1 MATVRRMKLGSQGLEVSAQGLGCM------GMSALYGPPKPEPDMIALIRHAINSGITFL 54
MA +G+ LE QG G M G PP+ + + A+ +G +
Sbjct: 1 MAHHHHHHMGT--LEAQTQGPGSMQYPPRLGFGTWQAPPEA---VQTAVETALMTGYRHI 55
Query: 55 DTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPHLPRFQ 108
D + +Y NE +G+AF F++ + + + I + Y+ P L R Q
Sbjct: 56 DCAYVY---QNEEAIGRAFGKIFKDASSGIKREDVWITSKLWNYNHRPELVREQ 106
>pdb|2YV3|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
pdb|2YV3|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
Length = 331
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 61 GPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLFE 120
GP +++L A G R +A + + G +VD + +P +P P + +K+F+
Sbjct: 58 GPLPVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEV--NREKIFQ 115
Query: 121 CVNEIAANKGCTPSQLALA-WVHHQG 145
I AN CT + LA+A W H+
Sbjct: 116 H-RGIIANPNCTTAILAMALWPLHRA 140
>pdb|3UZW|A Chain A, Crystal Structure Of 5beta-Reductase (Akr1d1) E120h Mutant
In Complex With Nadp+
pdb|3UZW|B Chain B, Crystal Structure Of 5beta-Reductase (Akr1d1) E120h Mutant
In Complex With Nadp+
pdb|3UZX|A Chain A, Crystal Structure Of 5beta-Reductase (Akr1d1) E120h Mutant
In Complex With Nadp+ And Epiandrosterone
pdb|3UZX|B Chain B, Crystal Structure Of 5beta-Reductase (Akr1d1) E120h Mutant
In Complex With Nadp+ And Epiandrosterone
pdb|3UZY|A Chain A, Crystal Structure Of 5beta-Reductase (Akr1d1) E120h Mutant
In Complex With Nadp+ And 5beta-Dihydrotestosterone
pdb|3UZY|B Chain B, Crystal Structure Of 5beta-Reductase (Akr1d1) E120h Mutant
In Complex With Nadp+ And 5beta-Dihydrotestosterone
pdb|3UZZ|A Chain A, Crystal Structure Of 5beta-Reductase (Akr1d1) E120h Mutant
In Complex With Nadp+ And Delta4-Androstenedione
pdb|3UZZ|B Chain B, Crystal Structure Of 5beta-Reductase (Akr1d1) E120h Mutant
In Complex With Nadp+ And Delta4-Androstenedione
Length = 346
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 122 VNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELEA 181
+N + T +Q+ L + +G V IP + + + EN + +T EEM ++EA
Sbjct: 264 LNSLGKRYNKTAAQIVLRFNIQRG--VVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEA 321
Query: 182 I 182
+
Sbjct: 322 L 322
>pdb|3CMF|A Chain A, Crystal Structure Of Human Liver 5beta-Reductase (Akr1d1)
In Complex With Nadp And Cortisone. Resolution 1.90 A.
pdb|3CMF|B Chain B, Crystal Structure Of Human Liver 5beta-Reductase (Akr1d1)
In Complex With Nadp And Cortisone. Resolution 1.90 A.
pdb|3COT|A Chain A, Crystal Structure Of Human Liver Delta(4)-3-Ketosteroid
5beta-Reductase (Akr1d1) In Complex With Progesterone
And Nadp. Resolution: 2.03 A.
pdb|3COT|B Chain B, Crystal Structure Of Human Liver Delta(4)-3-Ketosteroid
5beta-Reductase (Akr1d1) In Complex With Progesterone
And Nadp. Resolution: 2.03 A.
pdb|3DOP|A Chain A, Crystal Structure Of 5beta-Reductase (Akr1d1) In Complex
With Nadp+ And 5beta-Dihydrotestosterone, Resolution
2.00a
pdb|3DOP|B Chain B, Crystal Structure Of 5beta-Reductase (Akr1d1) In Complex
With Nadp+ And 5beta-Dihydrotestosterone, Resolution
2.00a
pdb|3G1R|A Chain A, Crystal Structure Of Human Liver 5beta-Reductase (Akr1d1)
In Complex With Nadp And Finasteride. Resolution 1.70 A
pdb|3G1R|B Chain B, Crystal Structure Of Human Liver 5beta-Reductase (Akr1d1)
In Complex With Nadp And Finasteride. Resolution 1.70 A
Length = 346
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 122 VNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELEA 181
+N + T +Q+ L + +G V IP + + + EN + +T EEM ++EA
Sbjct: 264 LNSLGKRYNKTAAQIVLRFNIQRG--VVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEA 321
Query: 182 I 182
+
Sbjct: 322 L 322
>pdb|3BUR|A Chain A, Crystal Structure Of Delta(4)-3-Ketosteroid
5-Beta-Reductase In Complex With Nadp And Testosterone.
Resolution: 1.62 A.
pdb|3BUR|B Chain B, Crystal Structure Of Delta(4)-3-Ketosteroid
5-Beta-Reductase In Complex With Nadp And Testosterone.
Resolution: 1.62 A.
pdb|3BUV|A Chain A, Crystal Structure Of Human Delta(4)-3-Ketosteroid
5-Beta-Reductase In Complex With Nadp And Hepes.
Resolution: 1.35 A.
pdb|3BUV|B Chain B, Crystal Structure Of Human Delta(4)-3-Ketosteroid
5-Beta-Reductase In Complex With Nadp And Hepes.
Resolution: 1.35 A.
pdb|3BV7|A Chain A, Crystal Structure Of Delta(4)-3-Ketosteroid
5-Beta-Reductase In Complex With Nadp And Glycerol.
Resolution: 1.79 A.
pdb|3BV7|B Chain B, Crystal Structure Of Delta(4)-3-Ketosteroid
5-Beta-Reductase In Complex With Nadp And Glycerol.
Resolution: 1.79 A.
pdb|3CAV|A Chain A, Crystal Structure Of 5beta-Reductase (Akr1d1) In Complex
With Nadp+ And 5beta-Pregnan-3,20-Dione
pdb|3CAV|B Chain B, Crystal Structure Of 5beta-Reductase (Akr1d1) In Complex
With Nadp+ And 5beta-Pregnan-3,20-Dione
pdb|3CAQ|A Chain A, Crystal Structure Of 5beta-Reductase (Akr1d1) In Complex
With Nadph
pdb|3CAQ|B Chain B, Crystal Structure Of 5beta-Reductase (Akr1d1) In Complex
With Nadph
pdb|3CAS|A Chain A, Crystal Structure Of 5beta-Reductase (Akr1d1) In Complex
With Nadp+ And 4-Androstenedione
pdb|3CAS|B Chain B, Crystal Structure Of 5beta-Reductase (Akr1d1) In Complex
With Nadp+ And 4-Androstenedione
Length = 326
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 122 VNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELEA 181
+N + T +Q+ L + +G V IP + + + EN + +T EEM ++EA
Sbjct: 244 LNSLGKRYNKTAAQIVLRFNIQRG--VVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEA 301
Query: 182 I 182
+
Sbjct: 302 L 302
>pdb|3H7R|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme
Akr4c8
Length = 331
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 122 VNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEM 176
V E+A G T +Q+AL W G V +P ++ A L EN++ I PE++
Sbjct: 243 VTEVAEKLGKTTAQVALRWGLQTGHSV--LPKSSSGARLKENLDVFDWSI-PEDL 294
>pdb|1R38|A Chain A, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|B Chain B, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|C Chain C, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|D Chain D, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
Length = 322
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 82 ELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLF--ECVNEIAANKGCTPSQLALA 139
E A K G+ I Y G G + LF + + IAA TP+++ L
Sbjct: 205 EFAQKAGVTIT--AYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEVLLR 262
Query: 140 WVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
W +G + IP + L +N + +T E+ E+
Sbjct: 263 WAAQRG--IAVIPKSNLPERLVQNRSFNTFDLTKEDFEEI 300
>pdb|1Z9A|A Chain A, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|B Chain B, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|C Chain C, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|D Chain D, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
Length = 321
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 82 ELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLF--ECVNEIAANKGCTPSQLALA 139
E A K G+ I Y G G + LF + + IAA TP+++ L
Sbjct: 204 EFAQKAGVTIT--AYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEVLLR 261
Query: 140 WVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
W +G + IP + L +N + +T E+ E+
Sbjct: 262 WAAQRG--IAVIPKSNLPERLVQNRSFNTFDLTKEDFEEI 299
>pdb|1JEZ|A Chain A, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto
Reductase From Candida Tenuis
pdb|1JEZ|B Chain B, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto
Reductase From Candida Tenuis
pdb|1K8C|A Chain A, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|B Chain B, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|C Chain C, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|D Chain D, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1MI3|A Chain A, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|B Chain B, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|C Chain C, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|D Chain D, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
Length = 322
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 82 ELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLF--ECVNEIAANKGCTPSQLALA 139
E A K G+ I Y G G + LF + + IAA TP+++ L
Sbjct: 205 EFAQKAGVTIT--AYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEVLLR 262
Query: 140 WVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
W +G + IP + L +N + +T E+ E+
Sbjct: 263 WAAQRG--IAVIPKSNLPERLVQNRSFNTFDLTKEDFEEI 300
>pdb|1YE4|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|B Chain B, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|C Chain C, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|D Chain D, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE6|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|B Chain B, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|C Chain C, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|D Chain D, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
Length = 322
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 82 ELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLF--ECVNEIAANKGCTPSQLALA 139
E A K G+ I Y G G + LF + + IAA TP+++ L
Sbjct: 205 EFAQKAGVTIT--AYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEVLLR 262
Query: 140 WVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
W +G + IP + L +N + +T E+ E+
Sbjct: 263 WAAQRG--IAVIPRSNLPERLVQNRSFNTFDLTKEDFEEI 300
>pdb|3B3D|A Chain A, B.Subtilis Ytbe
pdb|3B3D|B Chain B, B.Subtilis Ytbe
pdb|3B3D|C Chain C, B.Subtilis Ytbe
Length = 314
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 121 CVNEIAANKGCTPSQLALAWVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAELE 180
+ +IA + +Q+ L W G + IP +TK + EN ++T ++M ++
Sbjct: 240 VLADIAQTYNKSVAQIILRWDLQHG--IITIPKSTKEHRIKENASVFDFELTQDDMNRID 297
Query: 181 AI 182
A+
Sbjct: 298 AL 299
>pdb|1SM9|A Chain A, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|B Chain B, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|C Chain C, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|D Chain D, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
Length = 322
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 82 ELATKFGIGIVDGKYGYHGDPHLPRFQPGNLEHNQKLF--ECVNEIAANKGCTPSQLALA 139
E A K G+ I Y G G + LF + + IAA TP+++ L
Sbjct: 205 EFAQKAGVTIT--AYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEVLLR 262
Query: 140 WVHHQGDDVCPIPGTTKIANLNENIEALSVKITPEEMAEL 179
W +G + IP + L +N + +T E+ E+
Sbjct: 263 WAAQRG--IAVIPRSDLPERLVQNRSFNTFDLTKEDFEEI 300
>pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A
Resolution Reveals Multiple Anion Binding Sites
pdb|2PUM|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complex With
Catechol And Iodide At 2.7 A Resolution
pdb|2QPK|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Salicylhydroxamic Acid At 2.34 A Resolution
pdb|2QQT|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Acetyl Salicylic Acid At 2.5 A Resolution
pdb|2QRB|A Chain A, Crystal Structure Of Chloride Saturated Bovine
Lactoperoxidase At 2.5 A Resolution Shows Multiple
Halide Binding Sites
pdb|3BXI|A Chain A, Structure Of The Complex Of Bovine Lactoperoxidase With
Its Catalyzed Product Hypothiocyanate Ion At 2.3a
Resolution
pdb|3ERI|A Chain A, First Structural Evidence Of Substrate Specificity In
Mammalian Peroxidases: Crystal Structures Of Substrate
Complexes With Lactoperoxidases From Two Different
Species
pdb|3GC1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase
pdb|3GCJ|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3GCK|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3GCL|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3I6N|A Chain A, Mode Of Binding Of The Tuberculosis Prodrug Isoniazid To
Peroxidases: Crystal Structure Of Bovine Lactoperoxidase
With Isoniazid At 2.7 Resolution
pdb|3KRQ|A Chain A, Crystal Structure Of The Complex Of Lactoperoxidase With A
Potent Inhibitor Amino-Triazole At 2.2a Resolution
pdb|3NYH|A Chain A, Crystal Structure Of Lactoperoxidase Complexed
Simultaneously With Thiocyanate Ion, Iodide Ion, Bromide
Ion, Chloride Ion Through The Substrate Diffusion
Channel Reveals A Preferential Queue Of The Inorganic
Substrates Towards The Distal Heme Cavity
pdb|3OGW|A Chain A, Structure Of The Complex Of Bovine Lactoperoxidase With
Indomethacin At 1.9a Resolution
pdb|3PY4|A Chain A, Crystal Structure Of Bovine Lactoperoxidase In Complex
With Paracetamol At 2.4a Resolution
pdb|3Q9K|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complexed With
Phenyl Isothiocyanate At 1.7 A Resolution
pdb|3QL6|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Nimesulide At 1.7 A Resolution
pdb|3S4F|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With 1h- Pyrazolo[4,3-C] Pyridine At 1.99 A Resolution
pdb|3R4X|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complexed With
Pyrazine-2- Carboxamide At 2 A Resolution
pdb|3R5O|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With 4- Allyl-2-Methoxyphenol At 2.6 A Resolution
pdb|3TGY|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Ascorbic Acid At 2.35 A Resolution
pdb|3TUW|A Chain A, Crystal Structure Of Lactoperoxidase Complexed With
Pyrazinamide At 2.2a Resolution
pdb|3UBA|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With P- Hydroxycinnamic Acid At 2.6 A Resolution
pdb|3V6Q|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Carbon Monoxide At 2.0 A Resolution
pdb|4GM7|A Chain A, Structure Of Cinnamic Acid Bound Bovine Lactoperoxidase At
2.6a Resolution.
pdb|4GN6|A Chain A, Structure Of Paracetamol Bound Bovine Lactoperoxidase At
2.45a Resolution
Length = 595
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDG 94
P P +L R IN+ +FLD S +YG +E L + L++ G+ V+
Sbjct: 168 PTPPYQSLAREQINAVTSFLDASLVYG---SEPXLASRLRN-------LSSPLGLMAVNQ 217
Query: 95 KYGYHGDPHLP 105
+ HG +LP
Sbjct: 218 EAWDHGLAYLP 228
>pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In
Mammalian Peroxidases: Crystal Structures Of Substrate
Complexes With Lactoperoxidases From Two Different
Species
pdb|3FAQ|A Chain A, Crystal Struture Of Lactoperoxidase Complex With Cyanide
Length = 595
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDG 94
P P +L R IN+ +FLD S +YG +E L + L++ G+ V+
Sbjct: 168 PTPPYQSLAREQINAVTSFLDASLVYG---SEPXLASRLRN-------LSSPLGLMAVNQ 217
Query: 95 KYGYHGDPHLP 105
+ HG +LP
Sbjct: 218 EAWDHGLAYLP 228
>pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo
Lactoperoxidase With Fluoride Ion At 3.5a Resolution
pdb|3FNL|A Chain A, Crystal Structure Of The Complex Of Buffalo
Lactoperoxidase With Salicylhydroxamic Acid At 2.48 A
Resolution
Length = 595
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDG 94
P P +L R IN+ +FLD S +YG +E L + L++ G+ V+
Sbjct: 168 PTPPYQSLAREQINAVTSFLDASLVYG---SEPXLASRLQN-------LSSPLGLMAVNQ 217
Query: 95 KYGYHGDPHLP 105
+ HG +LP
Sbjct: 218 EAWDHGLAYLP 228
>pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine
Lactoperoxidase With Thiocyanate And Iodide At 3.1 A
Resolution
pdb|2NQX|A Chain A, Crystal Structure Of Bovine Lactoperoxidase With Iodide
Ions At 2.9a Resolution
Length = 595
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDG 94
P P +L R IN+ +FLD S +YG +E L + L++ G+ V+
Sbjct: 168 PTPPYQSLAREQINAVTSFLDASLVYG---SEPSLASRLRN-------LSSPLGLMAVNQ 217
Query: 95 KYGYHGDPHLP 105
+ HG +LP
Sbjct: 218 EAWDHGLAYLP 228
>pdb|1C3X|A Chain A, Purine Nucleoside Phosphorylase From Cellulomonas Sp. In
Complex With 8-Iodo-Guanine
pdb|1C3X|B Chain B, Purine Nucleoside Phosphorylase From Cellulomonas Sp. In
Complex With 8-Iodo-Guanine
pdb|1C3X|C Chain C, Purine Nucleoside Phosphorylase From Cellulomonas Sp. In
Complex With 8-Iodo-Guanine
pdb|1QE5|A Chain A, Purine Nucleoside Phosphorylase From Cellulomonas Sp. In
Complex With Phosphate
pdb|1QE5|B Chain B, Purine Nucleoside Phosphorylase From Cellulomonas Sp. In
Complex With Phosphate
pdb|1QE5|C Chain C, Purine Nucleoside Phosphorylase From Cellulomonas Sp. In
Complex With Phosphate
Length = 266
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 22 GCMGMSALYGPPKPE--PDMIALIRHAINSGITFLDTSDIYGPHTNEI 67
GC G++ +G P D I L + G TF+D +D+Y P E+
Sbjct: 119 GCGGLNQEWGAGTPVLLSDHINLTARSPLEGPTFVDLTDVYSPRLREL 166
>pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a
Resolution
Length = 583
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDG 94
P P +L R IN+ +FLD S +YG +E L + L++ G+ V+
Sbjct: 156 PTPPYQSLAREQINAVTSFLDASLVYG---SEPSLASRLRN-------LSSPLGLMAVNQ 205
Query: 95 KYGYHGDPHLP 105
+ HG +LP
Sbjct: 206 EAWDHGLAYLP 216
>pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a
Resolution
Length = 583
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDG 94
P P +L R IN+ +FLD S +YG +E L + L++ G+ V+
Sbjct: 156 PTPPYQSLAREQINAVTSFLDASLVYG---SEPSLASRLRN-------LSSPLGLMAVNQ 205
Query: 95 KYGYHGDPHLP 105
+ HG +LP
Sbjct: 206 EAWDHGLAYLP 216
>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With
Tetrahydrofuran At 2.7 A Resolution
Length = 595
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 35 PEPDMIALIRHAINSGITFLDTSDIYG 61
P P +L R INS +FLD S +YG
Sbjct: 168 PTPPYQSLARDQINSVTSFLDASLVYG 194
>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A
Resolution Reveals The Binding Sites For Formate
pdb|2IKC|B Chain B, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A
Resolution Reveals The Binding Sites For Formate
Length = 595
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 35 PEPDMIALIRHAINSGITFLDTSDIYG 61
P P +L R INS +FLD S +YG
Sbjct: 168 PTPPYQSLARDQINSVTSFLDASLVYG 194
>pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|B Chain B, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|C Chain C, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|D Chain D, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
Length = 283
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 20/98 (20%)
Query: 1 MATVRRMKLGSQGLEVSAQGLGCMGMSA--------------LYGPPKPEPD-MIALIRH 45
MA +G+ LE QG G M M+ YG + D ++ +
Sbjct: 1 MAHHHHHHMGT--LEAQTQGPGSMIMTVPTVKLNDGNHIPQLGYGVWQISNDEAVSAVSE 58
Query: 46 AINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAEL 83
A+ +G +DT+ IYG NE +GKA G RA++
Sbjct: 59 ALKAGYRHIDTATIYG---NEEGVGKAINGSGIARADI 93
>pdb|2RLI|A Chain A, Solution Structure Of Cu(i) Human Sco2
Length = 171
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 98 YHGDPHLPRFQPGNLEHNQKLFECVNEIAANKGCTPSQLALAWVHHQGDDV 148
Y G H P P LE KL + V ++ A G P Q V + DDV
Sbjct: 32 YFGFTHCPDICPDELE---KLVQVVRQLEAEPGLPPVQPVFITVDPERDDV 79
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,859,705
Number of Sequences: 62578
Number of extensions: 285110
Number of successful extensions: 803
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 91
length of query: 219
length of database: 14,973,337
effective HSP length: 95
effective length of query: 124
effective length of database: 9,028,427
effective search space: 1119524948
effective search space used: 1119524948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)