BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027742
(219 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435751|ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Vitis vinifera]
gi|297746470|emb|CBI16526.3| unnamed protein product [Vitis vinifera]
Length = 217
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 192/216 (88%), Gaps = 1/216 (0%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
++NRF RR FCTA RPWLFVGLGNPGDKYKGTRHN VGFEMI+AFAESQGI M+TVHCK
Sbjct: 1 MLNRFSRRLFCTASPRPWLFVGLGNPGDKYKGTRHN-VGFEMINAFAESQGIPMDTVHCK 59
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
A FGQGFV PV LAKPQTYMNLSGES GPLAAYYKLPLNRV+VFHDDM LPCGVLRL
Sbjct: 60 AIFGQGFVDAVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVVVFHDDMSLPCGVLRLH 119
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181
H GGHG HNGLKSV+ +FRGNREF RLRIGIG+PPGQMDPKAFLLQKF+A ARERID AL
Sbjct: 120 HKGGHGNHNGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFSATARERIDAAL 179
Query: 182 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 217
QEGV VLKLL SKGLTESAR FNT QKYKHIR+QNM
Sbjct: 180 QEGVGVLKLLSSKGLTESARCFNTEQKYKHIRVQNM 215
>gi|449452694|ref|XP_004144094.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/219 (81%), Positives = 193/219 (88%), Gaps = 2/219 (0%)
Query: 2 LINRFLRRGFCTAVA-RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC 60
+ ++ +RGFCTA++ RPWLFVGLGNPG+K++GTRHN VGFEMID FAES GISMN VHC
Sbjct: 1 MFSKLTKRGFCTAISSRPWLFVGLGNPGEKFRGTRHN-VGFEMIDVFAESIGISMNRVHC 59
Query: 61 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 120
KA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL
Sbjct: 60 KAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRL 119
Query: 121 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
+HNGGHG HNGLKSV+ +FRGNREFARLRIGIGRPPGQMDPKAFLLQKFN A+ERIDTA
Sbjct: 120 QHNGGHGYHNGLKSVIYHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNNTAQERIDTA 179
Query: 181 LQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 219
LQEGV LKLLLS L ESARHFN QKYKHIRLQ MP
Sbjct: 180 LQEGVGALKLLLSHSLFESARHFNHEQKYKHIRLQTMPV 218
>gi|449493540|ref|XP_004159339.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 178/219 (81%), Positives = 193/219 (88%), Gaps = 2/219 (0%)
Query: 2 LINRFLRRGFCTAVA-RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC 60
+ ++ +RGFCTA++ RPWLFVGLGNPG+K++GTRHN VGFEMID FAES GI MN VHC
Sbjct: 1 MFSKLTKRGFCTAISSRPWLFVGLGNPGEKFRGTRHN-VGFEMIDVFAESVGIPMNRVHC 59
Query: 61 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 120
KA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL
Sbjct: 60 KAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMTLPCGVLRL 119
Query: 121 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
+HNGGHG HNGLKSV+++FRGNREFARLRIGIGRPPGQMDPKAFLLQKFN A+ERIDTA
Sbjct: 120 QHNGGHGYHNGLKSVISHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNNTAQERIDTA 179
Query: 181 LQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 219
LQEGV LKLLLS L ESARHFN QKYKHIRLQ MP
Sbjct: 180 LQEGVGALKLLLSHSLFESARHFNHEQKYKHIRLQTMPV 218
>gi|449493552|ref|XP_004159345.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 365 bits (937), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 177/219 (80%), Positives = 192/219 (87%), Gaps = 2/219 (0%)
Query: 2 LINRFLRRGFCTAVA-RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC 60
+ N+ +RGFCTA++ RPWLF+GLGNPG+K++GTRHN VGFEMID FAES GISMN VHC
Sbjct: 1 MFNKLTKRGFCTAISSRPWLFMGLGNPGEKFRGTRHN-VGFEMIDVFAESIGISMNRVHC 59
Query: 61 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 120
KA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL
Sbjct: 60 KAVFGEGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRL 119
Query: 121 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
+HNGGH H GLKSV+ +FRGNREFARLRIGIGRPPGQMD KAFLLQKFN A+ERIDTA
Sbjct: 120 QHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTA 179
Query: 181 LQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 219
LQEGV LKLLLS GL+ESARHFN QKYKHIRLQ MP
Sbjct: 180 LQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 218
>gi|449452658|ref|XP_004144076.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Cucumis
sativus]
Length = 218
Score = 365 bits (936), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 177/219 (80%), Positives = 192/219 (87%), Gaps = 2/219 (0%)
Query: 2 LINRFLRRGFCTAVA-RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC 60
+ N+ +RGFCTA++ RPWLF+GLGNPG+K++GTRHN VGFEMID FAES GISMN VHC
Sbjct: 1 MFNKLTKRGFCTAISSRPWLFMGLGNPGEKFRGTRHN-VGFEMIDVFAESIGISMNRVHC 59
Query: 61 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 120
KA FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLNRVLVFHDDM LPCGVLRL
Sbjct: 60 KAVFGEGFVGDIPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVLVFHDDMNLPCGVLRL 119
Query: 121 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
+HNGGH H GLKSV+ +FRGNREFARLRIGIGRPPGQMD KAFLLQKFN A+ERIDTA
Sbjct: 120 QHNGGHDYHKGLKSVIYHFRGNREFARLRIGIGRPPGQMDSKAFLLQKFNNTAQERIDTA 179
Query: 181 LQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 219
LQEGV LKLLLS GL+ESARHFN QKYKHIRLQ MP
Sbjct: 180 LQEGVGALKLLLSHGLSESARHFNHKQKYKHIRLQTMPV 218
>gi|358248836|ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycine max]
gi|255645293|gb|ACU23143.1| unknown [Glycine max]
Length = 218
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
+++R RR FCT RPWLFVGLGNPGDK+KGTRHN VGFEMIDAFAESQGI M+TVH K
Sbjct: 1 MLHRLSRRCFCTFTPRPWLFVGLGNPGDKFKGTRHN-VGFEMIDAFAESQGIPMDTVHSK 59
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
A FG+GFVG+ PV LAKPQTYMNLSGESTGPLAAYYKLPLN+VLVFHDDM LPCGVLRL
Sbjct: 60 AIFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLH 119
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181
GGHG H GLKSV+ NFRGNREF RLRIGIG PPGQMDPKAFLLQKFN AR+RID AL
Sbjct: 120 DKGGHGSHKGLKSVIYNFRGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEAL 179
Query: 182 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 219
QEG++ LKLLLSKGLTESA+ FN QKYKH+R+QN+P
Sbjct: 180 QEGIDALKLLLSKGLTESAKRFNKEQKYKHLRVQNLPV 217
>gi|356512501|ref|XP_003524957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Glycine
max]
Length = 217
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 186/218 (85%), Gaps = 1/218 (0%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
++NR RR FCT RPWLFVGLGNPG+K+KGTRHN VGFEMIDAFAESQGI M+TVH K
Sbjct: 1 MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHN-VGFEMIDAFAESQGIPMDTVHSK 59
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
A G+GFVG+ PV LAKPQTYMNLSGESTGPLAAYYKLPLN+VLVFHDDM LPCGVLRL
Sbjct: 60 AISGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLH 119
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181
GGHG H GLKSV+ +F+GNREF RLRIGIG PPGQMDPKAFLLQKFN AR+RID AL
Sbjct: 120 DKGGHGSHKGLKSVIYHFKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEAL 179
Query: 182 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 219
QEGV+ LKLLLSKGL SA+ FN QKYKH+R+QN+P
Sbjct: 180 QEGVDALKLLLSKGLAVSAKRFNKEQKYKHLRVQNLPV 217
>gi|255582564|ref|XP_002532065.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223528269|gb|EEF30320.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 217
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/218 (76%), Positives = 185/218 (84%), Gaps = 1/218 (0%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
++N+ RR FCT +RPWL VGLGNPGDKYKGTRHN VGFEMIDAFA+ I M+ +H K
Sbjct: 1 MLNKVCRRCFCTVASRPWLIVGLGNPGDKYKGTRHN-VGFEMIDAFAQLLQIPMDKLHSK 59
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
A FG+GFVG+A VLLAKPQTYMNLSGES GPLAAYYKLPLNRV+V HDDM LPCGVLRL+
Sbjct: 60 AIFGEGFVGEASVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVLHDDMDLPCGVLRLQ 119
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181
GGHG HNGLKSV+++FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA A++RIDTA+
Sbjct: 120 PKGGHGSHNGLKSVIHHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATAQKRIDTAI 179
Query: 182 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 219
EG LK +L KGLTE+AR FN QKYKHIRLQ MP
Sbjct: 180 PEGAAALKSILFKGLTETARCFNQEQKYKHIRLQTMPT 217
>gi|224052908|ref|XP_002297632.1| predicted protein [Populus trichocarpa]
gi|222844890|gb|EEE82437.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 185/221 (83%), Gaps = 6/221 (2%)
Query: 2 LINRFLRRGFCTAVA-----RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN 56
++NR RR FCTA A PWLFVGLGNPG+K+KGTRHN VGFEMIDAFA S GISMN
Sbjct: 1 MLNRVSRRCFCTAAAAPTTLSPWLFVGLGNPGEKFKGTRHN-VGFEMIDAFAGSLGISMN 59
Query: 57 TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 116
CKA FG+GFVGDAPVLLAKPQTYMNLSGES GPLAAYYKLPLNRV+VFHDDM LPCG
Sbjct: 60 IPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCG 119
Query: 117 VLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARER 176
VLRL+ GGHG H GLKSV+N+FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA ARER
Sbjct: 120 VLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARER 179
Query: 177 IDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 217
ID AL EGV L+ +L +GLT +AR FN QKYK+IR + M
Sbjct: 180 IDAALPEGVVALRCILFEGLTRTARWFNQEQKYKYIRSETM 220
>gi|297808049|ref|XP_002871908.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
gi|297317745|gb|EFH48167.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/218 (74%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
+++ RR +CT+V RPWLF+GLGNPGDKYKGTRHN +GFEMID FAES GI MN V+ K
Sbjct: 1 MLSMLSRRCYCTSVHRPWLFLGLGNPGDKYKGTRHN-IGFEMIDVFAESVGIQMNLVNFK 59
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
A GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGVLRL+
Sbjct: 60 AIMGQGFVDDLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQ 119
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181
GGHG HNGLKSVMN+FRGNREFARLRIGIG PPGQMDPKAFLLQKF+ ARER+D AL
Sbjct: 120 EKGGHGCHNGLKSVMNHFRGNREFARLRIGIGNPPGQMDPKAFLLQKFSVPARERMDKAL 179
Query: 182 QEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNMPA 219
EGV+ LKL+LSK ES R FN QKYKH+R + A
Sbjct: 180 AEGVDALKLVLSKDFGESWRLFNVEQKYKHLRQHTIIA 217
>gi|79517018|ref|NP_197484.4| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
gi|75291353|sp|Q6NLS8.1|PTHM_ARATH RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; AltName: Full=Mitochondrial CRS2-like
protein; AltName: Full=Mitochondrial RNA splicing
factor; Flags: Precursor
gi|44681342|gb|AAS47611.1| At5g19830 [Arabidopsis thaliana]
gi|45773870|gb|AAS76739.1| At5g19830 [Arabidopsis thaliana]
gi|110735763|dbj|BAE99859.1| peptidyl tRNA hydrolases-like putative protein [Arabidopsis
thaliana]
gi|332005370|gb|AED92753.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 219
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/213 (75%), Positives = 181/213 (84%), Gaps = 2/213 (0%)
Query: 2 LINRFLRRGFCTA-VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC 60
+++R RR +CT+ V RPWLF+GLGNPGDKYKGTRHN +GFEMID FAES GI MN V+
Sbjct: 1 MLSRLSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHN-IGFEMIDVFAESVGIQMNLVNF 59
Query: 61 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 120
KA GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGVLRL
Sbjct: 60 KAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRL 119
Query: 121 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
+ GGHG HNGLKSVMN+FRGNREFARLRIGIG+PPGQMDPKAFLLQKF+ ARER+D A
Sbjct: 120 QEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKA 179
Query: 181 LQEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 213
L EGV+ LKL+L+K ES R FN QKYKH++
Sbjct: 180 LAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212
>gi|224052914|ref|XP_002297633.1| predicted protein [Populus trichocarpa]
gi|222844891|gb|EEE82438.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/221 (71%), Positives = 173/221 (78%), Gaps = 18/221 (8%)
Query: 2 LINRFLRRGFCTAVA-----RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN 56
++NR RR FCTA A PWLFVGLGNPG+K+KGTRHN ISMN
Sbjct: 1 MLNRVSRRCFCTAAAAPTTPSPWLFVGLGNPGEKFKGTRHNA-------------WISMN 47
Query: 57 TVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 116
CKA FG+GFVGDAPVLLAKPQTYMNLSGES GPLAAYYKLPLNRV+VFHDDM LPCG
Sbjct: 48 IPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCG 107
Query: 117 VLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARER 176
VLRL+ GGHG H GLKSV+N+FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA ARER
Sbjct: 108 VLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARER 167
Query: 177 IDTALQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 217
ID AL EGV L+ +L +GLT +AR FN QKYK+IR + M
Sbjct: 168 IDAALPEGVVALRCILFEGLTRTARWFNQEQKYKYIRSETM 208
>gi|255642567|gb|ACU21547.1| unknown [Glycine max]
Length = 202
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/200 (74%), Positives = 164/200 (82%), Gaps = 1/200 (0%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
++NR RR FCT RPWLFVGLGNPG+K+KGTRHN VGFEMIDA AESQGI M+TVH K
Sbjct: 1 MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHN-VGFEMIDALAESQGIPMDTVHSK 59
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
A G+GFVG+ PV LAKPQTYMNLSGES GPLAAYYKLPLN+VLVFHDDM LPCGVLRL
Sbjct: 60 AISGKGFVGEVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLH 119
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181
GGHG H GLKSV+ +F+GNREF RLRIGIG PPGQMDPKAFLLQKFN AR+RID AL
Sbjct: 120 DKGGHGSHKGLKSVIYHFKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEAL 179
Query: 182 QEGVEVLKLLLSKGLTESAR 201
QEGV+ L + + +E R
Sbjct: 180 QEGVDALSSFIQRFGSECKR 199
>gi|326507536|dbj|BAK03161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/198 (71%), Positives = 167/198 (84%), Gaps = 1/198 (0%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 74
V +PWLF+GLGNPG+KY+ TRHN VGF+MIDAFAESQGIS+ T H KA FG+G V PV
Sbjct: 34 VIQPWLFIGLGNPGEKYQSTRHN-VGFDMIDAFAESQGISLTTHHFKALFGEGVVDGVPV 92
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
LLAKPQTY+NLSGES G LAAYYKLPL+RV+V +DD LPCGVLRL+ GG+G HNGLKS
Sbjct: 93 LLAKPQTYINLSGESAGALAAYYKLPLHRVIVAYDDTDLPCGVLRLQPKGGYGRHNGLKS 152
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
V+ +FR NREF RLRIGIGRPPGQMDPKAF+LQKFN RERID+A++EG +LK++++K
Sbjct: 153 VIYHFRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTGRERIDSAIKEGCGILKMVVTK 212
Query: 195 GLTESARHFNTIQKYKHI 212
GLTE+AR N QKYKH+
Sbjct: 213 GLTEAARVSNVDQKYKHL 230
>gi|414866788|tpg|DAA45345.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 239
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/197 (72%), Positives = 166/197 (84%), Gaps = 1/197 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG+KY+ TRHN VGF+MIDAFA+SQGI + T + KA FG+G V PVLL
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHN-VGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLL 93
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNGLKSV+
Sbjct: 94 AKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGSGRHNGLKSVI 153
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+FR NREF RLRIGIGRP GQMDPKAF+LQKFN RERID+A++EGV++LK++ ++GL
Sbjct: 154 YHFRKNREFCRLRIGIGRPAGQMDPKAFVLQKFNRTGRERIDSAVREGVDILKMVAARGL 213
Query: 197 TESARHFNTIQKYKHIR 213
TE+A+ N QKYKH+R
Sbjct: 214 TEAAKLTNADQKYKHLR 230
>gi|219363585|ref|NP_001137055.1| uncharacterized protein LOC100217227 [Zea mays]
gi|194698178|gb|ACF83173.1| unknown [Zea mays]
Length = 239
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/197 (71%), Positives = 165/197 (83%), Gaps = 1/197 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG+KY+ TRHN VGF+MIDAFA+SQGI + T + KA G+G V PVLL
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHN-VGFDMIDAFAQSQGIPLTTHYFKALLGEGMVDGVPVLL 93
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNGLKSV+
Sbjct: 94 AKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGSGRHNGLKSVI 153
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+FR NREF RLRIGIGRP GQMDPKAF+LQKFN RERID+A++EGV++LK++ ++GL
Sbjct: 154 YHFRKNREFCRLRIGIGRPAGQMDPKAFVLQKFNRTGRERIDSAVREGVDILKMVAARGL 213
Query: 197 TESARHFNTIQKYKHIR 213
TE+A+ N QKYKH+R
Sbjct: 214 TEAAKLTNADQKYKHLR 230
>gi|357112247|ref|XP_003557921.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 234
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/196 (70%), Positives = 164/196 (83%), Gaps = 1/196 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG+KY+ TRHN VGF MIDAFA+SQGIS+ T H KA FG+G V PVLL
Sbjct: 33 QPWLFVGLGNPGEKYQSTRHN-VGFAMIDAFAQSQGISLTTHHFKALFGEGMVDGVPVLL 91
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQTY+NLSGES G LAAYYKLPLNRVLV +DD LPCGVLRL+ GG+G HNGLKSV+
Sbjct: 92 AKPQTYINLSGESAGALAAYYKLPLNRVLVAYDDTDLPCGVLRLQPKGGYGRHNGLKSVI 151
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+FR NREF RLRIGIGRPPGQMDP+AF+LQKFN RERID+A++EG ++LK+++ +G+
Sbjct: 152 YHFRKNREFGRLRIGIGRPPGQMDPRAFVLQKFNKTGRERIDSAMKEGADILKMVVIRGV 211
Query: 197 TESARHFNTIQKYKHI 212
TE+ R N QKYKH+
Sbjct: 212 TEAGRLSNADQKYKHL 227
>gi|125543850|gb|EAY89989.1| hypothetical protein OsI_11554 [Oryza sativa Indica Group]
gi|125586236|gb|EAZ26900.1| hypothetical protein OsJ_10828 [Oryza sativa Japonica Group]
Length = 274
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 168/217 (77%), Gaps = 15/217 (6%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 74
V PWLFVGLGNPG+KY+ TRHN VGF+MID FA+SQGIS+ KA FG+G V PV
Sbjct: 57 VINPWLFVGLGNPGEKYQCTRHN-VGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPV 115
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG--- 131
LLAKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG+G HNG
Sbjct: 116 LLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNGSVD 175
Query: 132 -----------LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
+KS++ +FR NREF RLRIGIGRPPGQMDPKAF+LQKFN RERID+A
Sbjct: 176 FIIMCFNELIRVKSLIYHFRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTGRERIDSA 235
Query: 181 LQEGVEVLKLLLSKGLTESARHFNTIQKYKHIRLQNM 217
++EGVE+LKL+++KGLTE+AR N QKYKH+ +M
Sbjct: 236 IEEGVEILKLVVTKGLTEAARSSNVDQKYKHLTTHDM 272
>gi|357166670|ref|XP_003580792.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 239
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/196 (71%), Positives = 165/196 (84%), Gaps = 1/196 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG+KY+ TRHN VGF+MIDAFA+SQGI + T H KA FG+G V PVLL
Sbjct: 37 QPWLFVGLGNPGEKYQSTRHN-VGFDMIDAFAQSQGIPLTTHHFKALFGEGMVDGVPVLL 95
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQTY+NLSGES LAAYYKLPL+RVLV +DD LPCGVLRL+ GG G HNGLKSV+
Sbjct: 96 AKPQTYINLSGESAAALAAYYKLPLHRVLVAYDDTDLPCGVLRLQPKGGSGRHNGLKSVI 155
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+FR NREF RLRIGIGRPPGQMDPKAF+LQKFN ARERID+ ++EGV++LK++++KGL
Sbjct: 156 YHFRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTARERIDSGIKEGVDILKMVVTKGL 215
Query: 197 TESARHFNTIQKYKHI 212
TE+AR N QKYKH+
Sbjct: 216 TEAARVSNVNQKYKHL 231
>gi|242040937|ref|XP_002467863.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
gi|241921717|gb|EER94861.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
Length = 241
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 159/203 (78%), Gaps = 3/203 (1%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG+KY+ TRHN VGF+MIDAFA+SQGI + T + KA FG+G V PVL+
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHN-VGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLI 93
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNG+ ++
Sbjct: 94 AKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGFGRHNGILNLC 153
Query: 137 NNFRGNREFARL--RIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
N+ +F +GIGRPPGQMDPKAF+LQKFN RERID+A++EGV +LK++ ++
Sbjct: 154 NSTLPCVDFWNFFSLVGIGRPPGQMDPKAFVLQKFNRTGRERIDSAIREGVNILKMVATR 213
Query: 195 GLTESARHFNTIQKYKHIRLQNM 217
GLTE+AR N QKYK +R ++
Sbjct: 214 GLTEAARLSNADQKYKLLRSHDI 236
>gi|162461597|ref|NP_001104963.1| chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic precursor [Zea mays]
gi|75312019|sp|Q9M5P4.1|CRS2_MAIZE RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 2; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 2; Flags: Precursor
gi|6752919|gb|AAF27939.1|AF225708_1 CRS2 [Zea mays]
Length = 256
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG+KY GTRHN VGFEM+D A +GI+MNT+ K+ G G +G+ PVL+
Sbjct: 61 PWLIAGLGNPGNKYYGTRHN-VGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVV 119
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+
Sbjct: 120 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIE 179
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 180 HLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 239
Query: 198 ESARHFNTIQKYKHIRL 214
S FN +QKYK R+
Sbjct: 240 GSTERFNLVQKYKFHRV 256
>gi|449455782|ref|XP_004145630.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
gi|449519774|ref|XP_004166909.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Cucumis sativus]
Length = 249
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY GTRHN VGFEMID+ A++QGI MNT+ KA G G +G+ P+LLA
Sbjct: 54 PWLIVGLGNPGNKYHGTRHN-VGFEMIDSIAQAQGILMNTIQSKALIGIGSIGEVPILLA 112
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN GES GPLAA+Y++PL VL+ +D+M LP GVLRL+ GHG HNG+KSVM
Sbjct: 113 KPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPNGVLRLQPKAGHGHHNGVKSVMG 172
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG MD KAFLLQKF+++ R++ID AL++GVE ++ L G +
Sbjct: 173 HLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERKQIDAALEQGVEAVRTLALNGFS 232
Query: 198 ESARHFNTIQKYKHIRL 214
+ FN QKYK+ ++
Sbjct: 233 QRVNRFNLSQKYKYHKV 249
>gi|194698704|gb|ACF83436.1| unknown [Zea mays]
gi|413947310|gb|AFW79959.1| chloroplast RNA splicing2 [Zea mays]
Length = 256
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG+KY GTRHN VGFEM+D A +GI+MNT+ K+ G G +G+ PVL+
Sbjct: 61 PWLIAGLGNPGNKYYGTRHN-VGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVV 119
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+
Sbjct: 120 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIE 179
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 180 HLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 239
Query: 198 ESARHFNTIQKYKHIRL 214
S FN +QKYK R+
Sbjct: 240 GSTERFNLVQKYKFHRV 256
>gi|356513117|ref|XP_003525260.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic [Glycine max]
Length = 259
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 147/196 (75%), Gaps = 1/196 (0%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
A PWL VGLGNPG KY TRHN VGFEM+D AE++GISM TV K+ FG+GF+GD PV+
Sbjct: 63 ASPWLIVGLGNPGKKYAATRHN-VGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVI 121
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
LAKPQTYMN SGES G + +YYK+PL +VLV DD+ LP LRL GGHGGHNG+KSV
Sbjct: 122 LAKPQTYMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSV 181
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+N+F+GN F RLRIGIGRPPG+MDP AF+L+ F RE ++ LQ+G+E +++LL +G
Sbjct: 182 INHFKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLEAVRILLLEG 241
Query: 196 LTESARHFNTIQKYKH 211
+SA N+ +K +
Sbjct: 242 FDKSATFVNSAKKIEQ 257
>gi|242056565|ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
gi|241929403|gb|EES02548.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
Length = 256
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 146/193 (75%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG+KY GTRHN VGFEM+D A +GI+MNT+ K+ G G +G+ PVL+
Sbjct: 61 PWLIAGLGNPGNKYYGTRHN-VGFEMVDRIAGEEGITMNTIQSKSLLGIGSIGEVPVLVV 119
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+YMN SGE+ GPLAAYY++PL +L+ +DDM LP GVLRL+ GGHG HNGL++V+
Sbjct: 120 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDMSLPNGVLRLQKKGGHGRHNGLQNVIE 179
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
N G REF RL IGIG PPG+MDP+AFLLQKF++ R +ID +L++GV+ ++ L+ KG
Sbjct: 180 NLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDASLEQGVDAVRTLVLKGFC 239
Query: 198 ESARHFNTIQKYK 210
S FN +QKYK
Sbjct: 240 GSTERFNLVQKYK 252
>gi|255631022|gb|ACU15875.1| unknown [Glycine max]
Length = 228
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 146/196 (74%), Gaps = 1/196 (0%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
A PWL VGLGNPG KY TRHN VGFEM+D AE++GISM TV K+ FG+GF+GD PV+
Sbjct: 27 ASPWLIVGLGNPGKKYAATRHN-VGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVI 85
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
LAKPQTYMN SGES G + +YYK+PL +VL DD+ LP LRL GGHGGHNG+KSV
Sbjct: 86 LAKPQTYMNSSGESVGAIVSYYKIPLKQVLEIFDDLDLPFAKLRLLPKGGHGGHNGVKSV 145
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+N+F+GN F RLRIGIGRPPG+MDP AF+L+ F RE ++ LQ+G+E +++LL +G
Sbjct: 146 INHFKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLEAVRILLLEG 205
Query: 196 LTESARHFNTIQKYKH 211
+SA N+ +K +
Sbjct: 206 FDKSATFVNSAKKIEQ 221
>gi|294462383|gb|ADE76740.1| unknown [Picea sitchensis]
Length = 256
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 153/200 (76%), Gaps = 4/200 (2%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWL VGLGNPG Y GTRHN VGFEMID A+++GIS++ + C+A FG+G + +PV+L
Sbjct: 60 KPWLLVGLGNPGKLYNGTRHN-VGFEMIDTIAQAEGISVSRIQCRALFGKGHINGSPVML 118
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MN SGES GPL AYYK+PLN+VL+ DDM LP LRL GGHGGHNG+KSV+
Sbjct: 119 AKPQTFMNASGESVGPLVAYYKIPLNQVLLIFDDMDLPFAKLRLLPKGGHGGHNGMKSVI 178
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
++F+GNREF RLRIGIGRPPG+MDP +++L+ F +E +D LQ+G++ +++L+++G
Sbjct: 179 DHFKGNREFPRLRIGIGRPPGKMDPISYVLRPFTKGEQEELDLTLQDGLDAIRILINQGF 238
Query: 197 TESARHFNTIQKYKHIRLQN 216
+SA N QK R+QN
Sbjct: 239 DKSATIVNRAQKA---RIQN 255
>gi|40889731|pdb|1RYM|A Chain A, Structure Of The Group Ii Intron Splicing Factor Crs2
Length = 212
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 148/197 (75%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG+KY GTRHN VGFEM+D A +GI+MNT K+ G G +G+ PVL+
Sbjct: 17 PWLIAGLGNPGNKYYGTRHN-VGFEMVDRIAAEEGITMNTEQSKSLLGIGSIGEVPVLVV 75
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+
Sbjct: 76 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIE 135
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 136 HLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 195
Query: 198 ESARHFNTIQKYKHIRL 214
S FN +QKYK R+
Sbjct: 196 GSTERFNLVQKYKFHRV 212
>gi|116783352|gb|ABK22906.1| unknown [Picea sitchensis]
Length = 246
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 151/194 (77%), Gaps = 1/194 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL +GLGNPG KY+GTRHN VGFEMID+ A+++GIS+N + K+ G+G++ + PVLLA
Sbjct: 51 PWLLIGLGNPGKKYEGTRHN-VGFEMIDSIAKAEGISLNAIQSKSLIGKGYICNTPVLLA 109
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTY+NL+GES G LA YY++P +L+ D M LP G+LR++ GGHG HNG+KSV+N
Sbjct: 110 KPQTYINLTGESVGSLAVYYRIPFQHILLMFDMMELPSGILRIQAKGGHGLHNGVKSVIN 169
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ +GNR F RL IGIG PPG MD KA++LQ+F+ + RE+++ +LQEGV+ +LL+S+G +
Sbjct: 170 HLKGNRNFPRLCIGIGNPPGSMDSKAYVLQQFSTMEREKMNISLQEGVDATRLLISEGFS 229
Query: 198 ESARHFNTIQKYKH 211
+S FN QKYK+
Sbjct: 230 QSIDGFNKRQKYKY 243
>gi|224079329|ref|XP_002305823.1| predicted protein [Populus trichocarpa]
gi|222848787|gb|EEE86334.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 145/194 (74%), Gaps = 1/194 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN VGFEMID A+++G+ MNT+ KA G G +G+ P+LLA
Sbjct: 49 PWLIVGLGNPGTKYHGTRHN-VGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLA 107
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ YMN SGES GPLAA+YK+PL +L+ +D+M LP G+LR++ GGHG HNG+KSVM+
Sbjct: 108 KPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMD 167
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG MD KAFLLQKF+ RE+ID +L++GVE ++ L+ G T
Sbjct: 168 HLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFT 227
Query: 198 ESARHFNTIQKYKH 211
FN QKYK+
Sbjct: 228 NKITRFNLGQKYKY 241
>gi|115434354|ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|75288538|sp|Q5ZCL8.1|CRS2_ORYSJ RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=CRS2-like protein;
AltName: Full=Chloroplastic RNA splicing factor 2;
Flags: Precursor
gi|53792159|dbj|BAD52792.1| putative peptidyl-tRNA hydrolase [Oryza sativa Japonica Group]
gi|113531466|dbj|BAF03849.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|215687059|dbj|BAG90905.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617682|gb|EEE53814.1| hypothetical protein OsJ_00257 [Oryza sativa Japonica Group]
Length = 259
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG KY GTRHN VGFEM+D A +GI+MNT+ K+ G G +G+ PVLL
Sbjct: 64 PWLIAGLGNPGSKYHGTRHN-VGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLV 122
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+Y+N SGE+ GPLAAYY++PL +LV +D+M LP GVLRL+ GGHG HNGL++VM
Sbjct: 123 KPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVME 182
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+RE RL IGIG PPG+MD +AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 183 CLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFS 242
Query: 198 ESARHFNTIQKYK 210
S FN +QKYK
Sbjct: 243 GSIERFNLVQKYK 255
>gi|357508117|ref|XP_003624347.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
gi|355499362|gb|AES80565.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
Length = 251
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 150/197 (76%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY GTRHN VGFE+ID+ ++S+GI MNT+ KA G G +G+ PVLLA
Sbjct: 56 PWLVVGLGNPGNKYHGTRHN-VGFEIIDSLSQSEGILMNTIQSKALIGIGSIGEVPVLLA 114
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGES GPLAAYY++PL +LV +D+ LP GVL+L+ GGHG HNGLK+V+
Sbjct: 115 KPQTYMNFSGESVGPLAAYYRVPLRHILVVYDETSLPNGVLKLQPKGGHGHHNGLKNVIG 174
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+R+F RL IGIG PPG MD +AFLLQKF+++ R+++D +L++GV+ +K L+ G
Sbjct: 175 HLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVKTLVLNGFN 234
Query: 198 ESARHFNTIQKYKHIRL 214
FN QKYK+ ++
Sbjct: 235 HHVNRFNLGQKYKYNKV 251
>gi|388501072|gb|AFK38602.1| unknown [Lotus japonicus]
Length = 247
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN VGFE+ID+ + ++GI MNT+ KA G G +GD PVLLA
Sbjct: 52 PWLVVGLGNPGSKYHGTRHN-VGFEIIDSLSRAEGILMNTIQSKALIGLGSIGDVPVLLA 110
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGE+ GPLAAYY++PL +++ +D+ LP GVLRL+ GGHG HNG K+VM
Sbjct: 111 KPQTYMNFSGEAVGPLAAYYRIPLRHIILVYDETSLPNGVLRLQPKGGHGHHNGSKNVMG 170
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+R+F RL IGIG PPG MD +AFLLQKF+++ R++ID +L++GV+ ++ L+ G +
Sbjct: 171 HLDGSRDFPRLAIGIGNPPGSMDSRAFLLQKFSSVERQQIDDSLEQGVQAIRTLVLHGFS 230
Query: 198 ESARHFNTIQKYKHIRL 214
+ FN QKYK+ ++
Sbjct: 231 QHVSRFNLGQKYKYHKV 247
>gi|357127248|ref|XP_003565295.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like [Brachypodium distachyon]
Length = 369
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 146/197 (74%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG KY GTRHN VGFEM+D A+ +GI MNT+ K+ G G +G+ PVLL
Sbjct: 174 PWLIAGLGNPGGKYHGTRHN-VGFEMVDRIAQVEGIVMNTIQSKSLLGVGSIGEVPVLLV 232
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+YMN GE+ GPLAAYY++PL +LV +D+M LP GVLRL+ GGHG HNGL++V+
Sbjct: 233 KPQSYMNYCGEAIGPLAAYYQVPLRHILVIYDEMSLPNGVLRLQRKGGHGRHNGLQNVIE 292
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG+MD +AFLLQKF++ R +ID AL++GV+ ++ L+ KG +
Sbjct: 293 HLDGCREFPRLSIGIGSPPGKMDTRAFLLQKFSSEERVQIDIALEQGVDAVRTLVLKGFS 352
Query: 198 ESARHFNTIQKYKHIRL 214
S FN +QKYK R+
Sbjct: 353 GSIERFNLVQKYKFNRV 369
>gi|357520293|ref|XP_003630435.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
gi|355524457|gb|AET04911.1| Chloroplastic group IIB intron splicing facilitator CRS2-B
[Medicago truncatula]
Length = 243
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY TRHN VGFE+ID+ ++SQGI MNT+ KA G G +G+ PVLLA
Sbjct: 48 PWLVVGLGNPGNKYHATRHN-VGFEIIDSLSQSQGILMNTIQSKALIGIGSIGEVPVLLA 106
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGES GPLAAYY++PL +LV +D+ LP GVL+L+ GGHG HNGLK+V+
Sbjct: 107 KPQTYMNFSGESVGPLAAYYRVPLRHILVVYDETSLPSGVLKLQPKGGHGHHNGLKNVIG 166
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+R+F RL IGIG PPG MD +AFLLQKF+++ R+++D +L++GV+ ++ L+ G
Sbjct: 167 HLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVRTLVLNGFN 226
Query: 198 ESARHFNTIQKYKHIRL 214
FN QKYK+ R+
Sbjct: 227 HHVNRFNLGQKYKYNRV 243
>gi|218187457|gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indica Group]
Length = 259
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG KY GTRHN VGFEM+D A +GI+MNT+ K+ G G +G+ PVLL
Sbjct: 64 PWLIAGLGNPGSKYHGTRHN-VGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLV 122
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+Y+N SGE+ GPLAAYY++PL +LV +D+M LP GVLRL+ GGHG HNGL++VM
Sbjct: 123 KPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVME 182
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+RE RL IGIG PPG+MD +AFLLQKF++ + +IDTAL++GV+ ++ L+ KG +
Sbjct: 183 CLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEEQLQIDTALEQGVDAVRTLVLKGFS 242
Query: 198 ESARHFNTIQKYK 210
S FN +QKYK
Sbjct: 243 GSIERFNLVQKYK 255
>gi|297844788|ref|XP_002890275.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336117|gb|EFH66534.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY+GTRHN VGFEM+DA A ++GISMNTV+ KA FG+G +G+ P+++A
Sbjct: 87 PWLIVGLGNPGKKYQGTRHN-VGFEMVDALANAEGISMNTVNFKALFGKGVIGNIPIMMA 145
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQT+MNLSGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 146 KPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIID 205
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+G+R+F RLRIGIGRPPG+MD F+L++FN +E +D Q G+E +++LL +G+
Sbjct: 206 RLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDYTFQTGIEAIRILLLEGIN 265
Query: 198 ESARHFNTIQKYKHI 212
+SA NT + + +
Sbjct: 266 KSATFVNTRKSMEQL 280
>gi|225455878|ref|XP_002275254.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Vitis
vinifera]
Length = 205
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 148/196 (75%), Gaps = 1/196 (0%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
+PWL VGLGNPG KY GTRHN VGFEM+DA AE++GIS+++V K+ FG+GF+G+ PV+
Sbjct: 8 VKPWLLVGLGNPGKKYNGTRHN-VGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVM 66
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
LAKPQT+MN+SGES G + +YYK+PL +VLV DD+ LP LRL GGHGGHNG++SV
Sbjct: 67 LAKPQTFMNVSGESVGAIVSYYKIPLKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSV 126
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+++F+G+R+F RLRIGIGRPPG+MD F+L F+ RE +D Q GVE +++LL +G
Sbjct: 127 IDHFKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEG 186
Query: 196 LTESARHFNTIQKYKH 211
+SA NT + +
Sbjct: 187 FNKSASFVNTAKSLEQ 202
>gi|357521083|ref|XP_003630830.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
gi|355524852|gb|AET05306.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
Length = 258
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 147/195 (75%), Gaps = 1/195 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
PWL VGLGNPG K+ GTRHN VGFEM+DA AE++GISM++V KA FG+G++GD PV+L
Sbjct: 63 EPWLIVGLGNPGKKFNGTRHN-VGFEMVDAIAEAEGISMSSVSFKALFGKGYIGDVPVIL 121
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MNLSGES G + +YYK+PL +VLV DD+ LP LRL GGHGGHNG+KSV+
Sbjct: 122 AKPQTFMNLSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVI 181
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ +GN F RLRIGIGRPPG+MDP AF+L+ F +E ++ LQ+G+E ++++L G
Sbjct: 182 NHLKGNSGFPRLRIGIGRPPGKMDPVAFVLRPFTKQEKEELNFTLQDGLEAVRIILLDGF 241
Query: 197 TESARHFNTIQKYKH 211
+ A N+ +K +
Sbjct: 242 DKGATFVNSAKKMEQ 256
>gi|270047872|pdb|1RYB|A Chain A, Crystal Structure Of The Chloroplast Group Ii Intron
Splicing Factor Crs2
Length = 205
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG+KY GTRHN VGFEM+D A +GI+MNT+ K+ G G +G+ PVL+
Sbjct: 17 PWLIAGLGNPGNKYYGTRHN-VGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVV 75
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+
Sbjct: 76 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIE 135
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 136 HLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 195
Query: 198 ESARHFNTIQ 207
S FN +Q
Sbjct: 196 GSTERFNLVQ 205
>gi|30685853|ref|NP_173279.2| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
gi|134035412|sp|Q8GW64.2|PTHC_ARATH RecName: Full=Peptidyl-tRNA hydrolase, chloroplastic; AltName:
Full=C-PTH; Flags: Precursor
gi|332191593|gb|AEE29714.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 288
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY+GTRHN VGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LA
Sbjct: 94 PWLIVGLGNPGKKYQGTRHN-VGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLA 152
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQT+MNLSGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 153 KPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIID 212
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+G+R+F RLRIGIGRPPG+MD F+L++FN +E +D Q G+E +++LL +G
Sbjct: 213 RLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFN 272
Query: 198 ESARHFNTIQKYKHI 212
+SA NT + + +
Sbjct: 273 KSATFVNTRKSMEQL 287
>gi|297734182|emb|CBI15429.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 148/196 (75%), Gaps = 1/196 (0%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
+PWL VGLGNPG KY GTRHN VGFEM+DA AE++GIS+++V K+ FG+GF+G+ PV+
Sbjct: 110 VKPWLLVGLGNPGKKYNGTRHN-VGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVM 168
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
LAKPQT+MN+SGES G + +YYK+PL +VLV DD+ LP LRL GGHGGHNG++SV
Sbjct: 169 LAKPQTFMNVSGESVGAIVSYYKIPLKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSV 228
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+++F+G+R+F RLRIGIGRPPG+MD F+L F+ RE +D Q GVE +++LL +G
Sbjct: 229 IDHFKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEG 288
Query: 196 LTESARHFNTIQKYKH 211
+SA NT + +
Sbjct: 289 FNKSASFVNTAKSLEQ 304
>gi|40889732|pdb|1RYN|A Chain A, Structure Of The Chloroplast Group Ii Intron Splicing
Factor Crs2
Length = 202
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 144/191 (75%), Gaps = 1/191 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG+KY GTRHN VGFEM+D A +GI+MNT K+ G G +G+ PVL+
Sbjct: 5 PWLIAGLGNPGNKYYGTRHN-VGFEMVDRIAAEEGITMNTNQFKSLLGTGSIGEVPVLVV 63
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+
Sbjct: 64 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIE 123
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 124 HLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 183
Query: 198 ESARHFNTIQK 208
S FN +QK
Sbjct: 184 GSTERFNLVQK 194
>gi|297805938|ref|XP_002870853.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316689|gb|EFH47112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 141/193 (73%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN +GFEMID A + ISMNT+ KA G G VG+ P+LL
Sbjct: 46 PWLIVGLGNPGFKYYGTRHN-IGFEMIDHIARATEISMNTIQSKALVGIGSVGEVPILLV 104
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ YMN SGES GPLAAYY++PL +L+ +DDMGLP GVLRL+ GGH HNGLK+V
Sbjct: 105 KPQAYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLPNGVLRLQPKGGHSQHNGLKNVTE 164
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R + RL IGIG PPG MD KAFLLQKF+ + R++ID L++GVE +K L+ +G +
Sbjct: 165 HLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQIDAGLEQGVEGVKTLVEEGFS 224
Query: 198 ESARHFNTIQKYK 210
+S FN QKYK
Sbjct: 225 DSISRFNLGQKYK 237
>gi|26453108|dbj|BAC43630.1| unknown protein [Arabidopsis thaliana]
gi|28950849|gb|AAO63348.1| At1g18440 [Arabidopsis thaliana]
Length = 288
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY+GTRHN VGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LA
Sbjct: 94 PWLIVGLGNPGKKYQGTRHN-VGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLA 152
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQT+M+LSGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 153 KPQTFMDLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIID 212
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+G+R+F RLRIGIGRPPG+MD F+L++FN +E +D Q G+E +++LL +G
Sbjct: 213 RLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFN 272
Query: 198 ESARHFNTIQKYKHI 212
+SA NT + + +
Sbjct: 273 KSATFVNTRKSMEQL 287
>gi|218188893|gb|EEC71320.1| hypothetical protein OsI_03361 [Oryza sativa Indica Group]
Length = 250
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG Y+GTRHN VGFEMID AE++GIS++++ KA G+G +GDAP++L
Sbjct: 54 KPWLFVGLGNPGKVYQGTRHN-VGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIML 112
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MN SGES G L +Y+K+PLN+VLV +DD+ LP LRL GGHGGHNG++S++
Sbjct: 113 AKPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGMRSII 172
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ + NR+F RLRIGIGRPPG+MDP F+L+ FN +E +D A G+E ++++ +G
Sbjct: 173 NHLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGF 232
Query: 197 TESARHFNTIQKYKHI 212
+SA + NT Q + +
Sbjct: 233 NKSATYVNTAQSSEML 248
>gi|115439337|ref|NP_001043948.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|75285812|sp|Q5N9Q7.1|PTHM_ORYSJ RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; Flags: Precursor
gi|56785144|dbj|BAD81799.1| Peptidyl-tRNA hydrolase-like [Oryza sativa Japonica Group]
gi|113533479|dbj|BAF05862.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|215704712|dbj|BAG94340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619093|gb|EEE55225.1| hypothetical protein OsJ_03102 [Oryza sativa Japonica Group]
Length = 250
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG Y+GTRHN VGFEMID AE++GIS++++ KA G+G +GDAP++L
Sbjct: 54 KPWLFVGLGNPGKVYQGTRHN-VGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIML 112
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MN SGES G L +Y+K+PLN+VLV +DD+ LP LRL GGHGGHNG++S++
Sbjct: 113 AKPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSII 172
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ + NR+F RLRIGIGRPPG+MDP F+L+ FN +E +D A G+E ++++ +G
Sbjct: 173 NHLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGF 232
Query: 197 TESARHFNTIQKYKHI 212
+SA + NT Q + +
Sbjct: 233 NKSATYVNTAQSSEML 248
>gi|58743494|gb|AAW81735.1| Putative Putative Pepidyl-tRNA hydrolase family protein [Brassica
oleracea]
Length = 291
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 149/194 (76%), Gaps = 1/194 (0%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG KY+GTRHN VGFEM+DA AE++GISMNTV+ KA FG+G +G+ P++LAK
Sbjct: 98 WLIVGLGNPGKKYQGTRHN-VGFEMVDALAEAEGISMNTVNFKALFGKGVIGNIPIMLAK 156
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 157 PQTFMNASGESVGQIVSFYKIPLKQVLVIYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 216
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+G+R+F RLRIGIGRPPG+MD ++L++FN +E +D Q G+E ++++L +G +
Sbjct: 217 LKGSRDFPRLRIGIGRPPGKMDTANYVLRQFNKQEQEELDYTFQTGLEAIRIMLLEGFNK 276
Query: 199 SARHFNTIQKYKHI 212
SA NT + + +
Sbjct: 277 SATFVNTQKSMQQL 290
>gi|297811751|ref|XP_002873759.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319596|gb|EFH50018.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY GTRHN VGFEMID A +G+ MNT+ KA G G + D P+LL
Sbjct: 44 PWLIVGLGNPGNKYHGTRHN-VGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLV 102
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGES G LA++Y++PL +L+ +D+M LP GVLRL+ GG G HNG+KSVM
Sbjct: 103 KPQTYMNFSGESVGSLASHYRVPLRHILMLYDEMALPNGVLRLQPKGGQGYHNGVKSVMG 162
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R F RL IGIG+PPG MD KAFLLQKF+ + R++ID AL++G E +K L+ G
Sbjct: 163 HLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLERKQIDEALEQGSEAVKTLVLNGFN 222
Query: 198 ESARHFNTIQKYK 210
+ FN +QKYK
Sbjct: 223 QGISRFNLVQKYK 235
>gi|388522905|gb|AFK49514.1| unknown [Medicago truncatula]
Length = 258
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
PWL VGLGNPG K+ GTRHN VGFEM+D AE++GISM++V KA FG+G++GD PV+L
Sbjct: 63 EPWLIVGLGNPGKKFNGTRHN-VGFEMVDTIAEAEGISMSSVSFKALFGKGYIGDVPVIL 121
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MNLSGES G + +YYK+PL +VLV D + LP LRL GGHGGHNG+KSV+
Sbjct: 122 AKPQTFMNLSGESVGAIVSYYKIPLKQVLVIFDGLDLPFAKLRLLPKGGHGGHNGMKSVI 181
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ +GN F RLRIGIGRPPG+MDP AF+L+ F +E ++ LQ+G+E ++++L G
Sbjct: 182 NHLKGNSGFPRLRIGIGRPPGKMDPVAFVLRPFTKQEKEELNFTLQDGLEAVRIILLDGF 241
Query: 197 TESARHFNTIQKYKH 211
+ A N+ +K +
Sbjct: 242 DKGATFVNSAKKMEQ 256
>gi|242058417|ref|XP_002458354.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
gi|241930329|gb|EES03474.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
Length = 247
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 150/196 (76%), Gaps = 1/196 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG Y+GTRHN VGFEMID AE++GIS++++ KA G+G +GDAP++L
Sbjct: 51 KPWLFVGLGNPGKVYQGTRHN-VGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIML 109
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MN SGES G L +Y+K+PLN+V+V +DD+ LP LRL GGHGGHNG++S++
Sbjct: 110 AKPQTFMNASGESVGQLVSYFKIPLNQVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIV 169
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ + +R+F RLRIGIGRPPG+MDP F+L+ FN +E +D AL G+E +++++ G
Sbjct: 170 NHLKQSRDFPRLRIGIGRPPGKMDPANFVLRPFNKKEQEELDFALHRGLEAVRIMVLGGF 229
Query: 197 TESARHFNTIQKYKHI 212
+SA + NT Q + +
Sbjct: 230 NKSATYVNTAQSSEML 245
>gi|224118918|ref|XP_002317938.1| predicted protein [Populus trichocarpa]
gi|222858611|gb|EEE96158.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 146/195 (74%), Gaps = 1/195 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY TRHN VGF+M+DA A+++GIS++ V KA FG+GF+G+ PV+ A
Sbjct: 77 PWLIVGLGNPGKKYHSTRHN-VGFQMVDALADAEGISISGVSFKALFGKGFIGNVPVMFA 135
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQT+MN SGES G + +YYK+PL +VL+ +DD+ LP LRL GGHGGHNG+KSV+N
Sbjct: 136 KPQTFMNASGESVGAIVSYYKIPLKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMKSVIN 195
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+F+GNR+F RLRIGIGRPPG+MD F+L+ F E +D Q+G+E +++LL +GL
Sbjct: 196 HFKGNRDFPRLRIGIGRPPGKMDTANFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLN 255
Query: 198 ESARHFNTIQKYKHI 212
+SA N+ + + +
Sbjct: 256 KSATFVNSTKSMEQL 270
>gi|15237280|ref|NP_197118.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|145334495|ref|NP_001078593.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|75311128|sp|Q9LF14.1|CRS2B_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic; AltName: Full=CRS2-like protein
B; AltName: Full=Chloroplastic RNA splicing factor 2-B;
Flags: Precursor
gi|9755824|emb|CAC01855.1| CRS2-like protein [Arabidopsis thaliana]
gi|38016015|gb|AAR07514.1| At5g16140 [Arabidopsis thaliana]
gi|51968726|dbj|BAD43055.1| CRS2-like protein [Arabidopsis thaliana]
gi|332004868|gb|AED92251.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|332004869|gb|AED92252.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
Length = 240
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 141/193 (73%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY GTRHN VGFEMID A +G+ MNT+ KA G G + D P+LLA
Sbjct: 45 PWLIVGLGNPGNKYHGTRHN-VGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLA 103
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGES G LA++Y++PL +L+ +D+M LP GVLRL+ GG G HNG+KSVM
Sbjct: 104 KPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMG 163
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R F RL IGIG+PPG MD KAFLLQKF+ + +++I+ AL++G E +K L+ G
Sbjct: 164 HLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFN 223
Query: 198 ESARHFNTIQKYK 210
+ FN +QKYK
Sbjct: 224 QGISRFNLVQKYK 236
>gi|42573527|ref|NP_974860.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
gi|332006907|gb|AED94290.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 250
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN +GFEMID A + ISMNT+ KA G G VG+ P+LL
Sbjct: 55 PWLIVGLGNPGLKYYGTRHN-IGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLV 113
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ YMN SGES GPLAAYY++PL +L+ +DDMGL GVLRL+ GGH HNGLK+V
Sbjct: 114 KPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTE 173
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R + RL IGIG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G +
Sbjct: 174 HLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFS 233
Query: 198 ESARHFNTIQKYK 210
+S FN QKYK
Sbjct: 234 DSISRFNLGQKYK 246
>gi|15240875|ref|NP_198645.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
gi|75309164|sp|Q9FKN4.1|CRS2A_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-A, chloroplastic; AltName: Full=CRS2-like protein
A; AltName: Full=Chloroplastic RNA splicing factor 2-A;
Flags: Precursor
gi|9758861|dbj|BAB09443.1| unnamed protein product [Arabidopsis thaliana]
gi|90962962|gb|ABE02405.1| At5g38290 [Arabidopsis thaliana]
gi|332006908|gb|AED94291.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 246
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN +GFEMID A + ISMNT+ KA G G VG+ P+LL
Sbjct: 51 PWLIVGLGNPGLKYYGTRHN-IGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLV 109
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ YMN SGES GPLAAYY++PL +L+ +DDMGL GVLRL+ GGH HNGLK+V
Sbjct: 110 KPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTE 169
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R + RL IGIG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G +
Sbjct: 170 HLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFS 229
Query: 198 ESARHFNTIQKYK 210
+S FN QKYK
Sbjct: 230 DSISRFNLGQKYK 242
>gi|255551384|ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 253
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 144/201 (71%), Gaps = 7/201 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQ-------VGFEMIDAFAESQGISMNTVHCKATFGQGFVG 70
PWL VGLGNPG+KY GTRHN VGFEMID A+++ ++MNT+ KA G G +
Sbjct: 50 PWLIVGLGNPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIK 109
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
+ P+LL KPQ YMN SGES GPLAA+Y++PL +L+ +D+M LP GV+RL+ GGHG HN
Sbjct: 110 EVPILLVKPQAYMNFSGESVGPLAAHYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGHHN 169
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
G+KSVM + G REF RL IGIG PPG MD +AFLLQKF++ RE+ID AL +G++ ++
Sbjct: 170 GVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRT 229
Query: 191 LLSKGLTESARHFNTIQKYKH 211
L+ G ++ FN QKYK+
Sbjct: 230 LVLSGFNQNITRFNLGQKYKY 250
>gi|255541798|ref|XP_002511963.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223549143|gb|EEF50632.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 272
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 149/198 (75%), Gaps = 1/198 (0%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
+V +PWL VGLGNPG KY+ TRHN VGFEM+DA A+S+GI +++V KA G+G++G+ P
Sbjct: 74 SVKKPWLIVGLGNPGKKYQSTRHN-VGFEMVDAVADSEGIPLSSVSFKALLGKGYIGNVP 132
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V+LAKPQT+MN SGES G + +YYK+PL +VL+ +DD+ LP LRL GGHGGHNG++
Sbjct: 133 VMLAKPQTFMNASGESVGAIVSYYKIPLKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMR 192
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV+++F+G+R+F RLRIGIGRPPG+MD F+L+ F+ E +D Q+G+E +++LL
Sbjct: 193 SVIDHFKGSRDFPRLRIGIGRPPGKMDSANFVLRPFSRQEHEELDFTFQQGLEAIRILLL 252
Query: 194 KGLTESARHFNTIQKYKH 211
+G +SA N+ + +
Sbjct: 253 EGFNKSATFVNSAKSMEQ 270
>gi|225452074|ref|XP_002284030.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic [Vitis vinifera]
gi|296087264|emb|CBI33638.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 141/194 (72%), Gaps = 1/194 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY GTRHN VGFEMID ++ +GI +NT+ KA G G +G+ P+LLA
Sbjct: 51 PWLIVGLGNPGNKYHGTRHN-VGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLA 109
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ YMN SGES GPLAAYY++PL +LV +D+M LP GVLRL GGHG HNGLK+VM
Sbjct: 110 KPQAYMNFSGESVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMG 169
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG MD KA+LLQKF+ R++ID A ++G+ ++ L+ G
Sbjct: 170 HLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFN 229
Query: 198 ESARHFNTIQKYKH 211
S FN QKYK+
Sbjct: 230 HSTTRFNLGQKYKY 243
>gi|26451849|dbj|BAC43017.1| putative CRS2 [Arabidopsis thaliana]
Length = 246
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN +GFEMID A + ISMNT+ KA G G VG+ P+LL
Sbjct: 51 PWLIVGLGNPGLKYYGTRHN-IGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLV 109
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ YMN SGES GPLAAYY++PL +L+ +DD+GL GVLRL+ GGH HNGLK+V
Sbjct: 110 KPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDLGLSNGVLRLQPKGGHSQHNGLKNVTE 169
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R + RL IGIG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G +
Sbjct: 170 HLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFS 229
Query: 198 ESARHFNTIQKYK 210
+S FN QKYK
Sbjct: 230 DSISRFNLGQKYK 242
>gi|226531744|ref|NP_001148279.1| peptidyl-tRNA hydrolase [Zea mays]
gi|194697668|gb|ACF82918.1| unknown [Zea mays]
gi|195617118|gb|ACG30389.1| peptidyl-tRNA hydrolase [Zea mays]
gi|414880876|tpg|DAA58007.1| TPA: peptidyl-tRNA hydrolase [Zea mays]
Length = 247
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 104/196 (53%), Positives = 150/196 (76%), Gaps = 1/196 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG Y+GTRHN VGFEMID AE++GIS++++ KA G+G +GDA ++L
Sbjct: 51 KPWLFVGLGNPGKVYQGTRHN-VGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDASIML 109
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MN SGES G L +Y+K+PL++V+V +DD+ LP LRL GGHGGHNG++S++
Sbjct: 110 AKPQTFMNASGESVGQLVSYFKIPLSQVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIV 169
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ + +R+F RLRIGIGRPPG+MDP F+L+ FN ++ +D AL G+E +++++ +G
Sbjct: 170 NHLKQSRDFPRLRIGIGRPPGKMDPANFVLRPFNKKEQQELDFALHRGLEAVRIMVPEGF 229
Query: 197 TESARHFNTIQKYKHI 212
+SA + NT Q + +
Sbjct: 230 NKSATYVNTAQSSEML 245
>gi|357518883|ref|XP_003629730.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
gi|355523752|gb|AET04206.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
Length = 403
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/152 (71%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
+++ +R FCT RPWLFVGLGNPGDKYKGTRHN VGFEMIDAFAESQGI+M+TVHCK
Sbjct: 1 MLSTLTKRSFCTVAPRPWLFVGLGNPGDKYKGTRHN-VGFEMIDAFAESQGIAMDTVHCK 59
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
A FG+GFVGD PV LAKPQTYMNLSGES GPLAAYYKLPLN+VLVFHDDM LPCGVLRL
Sbjct: 60 AIFGKGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLN 119
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIG 153
GGHG H G N R + + IG
Sbjct: 120 DKGGHGSHKGKTMANNAIRSQKANTHISFPIG 151
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 71/88 (80%)
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKSV+ NFR N EF RLRIGIG+PPGQMDPKAFLLQKFN AR+RID ALQEGV+ LKLL
Sbjct: 250 LKSVIYNFRDNSEFPRLRIGIGKPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALKLL 309
Query: 192 LSKGLTESARHFNTIQKYKHIRLQNMPA 219
L GL SA+ FN QKYKH+++Q +P
Sbjct: 310 LFIGLEVSAKRFNKEQKYKHLKVQTLPV 337
>gi|449486844|ref|XP_004157420.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cucumis
sativus]
Length = 273
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG KY TRHN VGFEM+DA AE++GIS++ V KA G+GF+GD PV+LAK
Sbjct: 80 WLIVGLGNPGKKYDRTRHN-VGFEMVDAVAEAEGISISNVSFKALIGKGFIGDVPVMLAK 138
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGES G + +YYK+PL +VLV DD+ LP LR+ GGHGGHNG++S++++
Sbjct: 139 PQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDH 198
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
F+G+R+F RLRIGIGRPPG+MD F+L+ FN RE ++ LQ G + +++LL +G +
Sbjct: 199 FKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGEDAIRILLLEGFNK 258
Query: 199 SARHFNTIQKYKHI 212
SA NT + + I
Sbjct: 259 SATFVNTNKSLEQI 272
>gi|449439389|ref|XP_004137468.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Cucumis
sativus]
Length = 274
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 144/194 (74%), Gaps = 1/194 (0%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG KY TRHN VGFEM+DA AE++GIS++ V KA G+GF+GD PV+LAK
Sbjct: 81 WLIVGLGNPGKKYDRTRHN-VGFEMVDAVAEAEGISISNVSFKALIGKGFIGDVPVMLAK 139
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGES G + +YYK+PL +VLV DD+ LP LR+ GGHGGHNG++S++++
Sbjct: 140 PQTFMNASGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRMLPKGGHGGHNGMRSIIDH 199
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
F+G+R+F RLRIGIGRPPG+MD F+L+ FN RE ++ LQ G + +++LL +G +
Sbjct: 200 FKGSRDFPRLRIGIGRPPGKMDAANFVLRPFNKQEREELNFTLQVGEDAIRILLLEGFNK 259
Query: 199 SARHFNTIQKYKHI 212
SA NT + + I
Sbjct: 260 SATFVNTNKSLEQI 273
>gi|242088699|ref|XP_002440182.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
gi|241945467|gb|EES18612.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
Length = 262
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD 71
C +PWLFVGLGNPG YKGTRHN VGFEMIDA AE++GIS+++ KA G+G +GD
Sbjct: 61 CAGAQKPWLFVGLGNPGRMYKGTRHN-VGFEMIDAIAEAEGISVSSKQFKAIVGKGLIGD 119
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
PV+LAKPQT+MN SGES G L +Y+K+PLN+++V +DD+ LP LRL GGHGGHNG
Sbjct: 120 VPVMLAKPQTFMNASGESVGQLVSYFKIPLNQLVVIYDDLDLPFAKLRLLPKGGHGGHNG 179
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
++S++++ + +R FARLRIGIGRPP + +F+LQ F +E ++ Q G++ ++++
Sbjct: 180 MRSIIDHLKQSRNFARLRIGIGRPPEEQGAISFVLQSFTVQEKEELEVVFQRGLQAVRIM 239
Query: 192 LSKGLTESARHFNT 205
+ +G +SA+ NT
Sbjct: 240 VQEGFNKSAQFVNT 253
>gi|358248120|ref|NP_001239818.1| uncharacterized protein LOC100804132 [Glycine max]
gi|255645504|gb|ACU23247.1| unknown [Glycine max]
Length = 244
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 142/197 (72%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL +GLGNPG+KY GTRHN VGFE+ID+ + ++GI MNT+ KA G G +G+ P+LLA
Sbjct: 49 PWLIIGLGNPGNKYHGTRHN-VGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLA 107
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGES GPLAAYY++PL +L+ D+ LP GVLRL+ GGHG HNGLK+VM
Sbjct: 108 KPQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMG 167
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G F RL +GIG PPG MD +A+LLQKF+ R++ID +L++ V ++ ++ G
Sbjct: 168 HLDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFD 227
Query: 198 ESARHFNTIQKYKHIRL 214
+ FN QKYK+ ++
Sbjct: 228 QHVNRFNLGQKYKYHKV 244
>gi|357136028|ref|XP_003569608.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 249
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 143/196 (72%), Gaps = 1/196 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG Y+ TRHN VGFEMID AE++GIS++++ KA G+G +GD P++L
Sbjct: 53 KPWLFVGLGNPGKIYQSTRHN-VGFEMIDVIAEAEGISLSSMQFKAMVGRGRIGDVPIML 111
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MN SGES G L +Y+K+PLN+VLV +DD+ LP LRL GGHGGHNG++S++
Sbjct: 112 AKPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGMRSII 171
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ + +F RLRIGIGRPPG+MDP F+L+ F +E +D G+E ++++ +G
Sbjct: 172 NHLKQTHDFPRLRIGIGRPPGKMDPANFVLRPFTKKEQEELDFTFHRGLEAVRIMTVEGF 231
Query: 197 TESARHFNTIQKYKHI 212
+SA NT+Q + +
Sbjct: 232 NKSATFVNTVQSSEML 247
>gi|168050723|ref|XP_001777807.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670783|gb|EDQ57345.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 143/197 (72%), Gaps = 1/197 (0%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
A+ PWL VGLGNPG K+ GTRHN +GFE+IDA AE++ I + T+ ++ G+GF+G P
Sbjct: 52 ALGLPWLIVGLGNPGSKFVGTRHN-IGFELIDAIAEAENIPLRTIQQRSLLGKGFIGPTP 110
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
VLLAKP TYMNLSGES GP++ YYK+P RVL +DD+ L +LR+ GGHGGHNG++
Sbjct: 111 VLLAKPHTYMNLSGESVGPISTYYKIPRERVLAIYDDLELEFAMLRILPRGGHGGHNGMR 170
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
S++ +F G ++F RLR G+GRP MDP A++LQKFN R+ +D LQ GVE ++LL++
Sbjct: 171 SLIEHFGGKQDFPRLRFGVGRPECNMDPSAYVLQKFNPRERKELDEVLQRGVEGVRLLMT 230
Query: 194 KGLTESARHFNTIQKYK 210
+GL ++ +N +K +
Sbjct: 231 EGLQKTVTTWNLHRKSR 247
>gi|168038662|ref|XP_001771819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676950|gb|EDQ63427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 252
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG K++GTRHN +GF+MIDA AE++ I + + K+ G+G++G PVLLA
Sbjct: 58 PWLIVGLGNPGIKFEGTRHN-IGFDMIDAIAEAENIPLRMIQHKSLLGKGYIGTTPVLLA 116
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMNLSGES GPL+AYYK+P RVL DD+ L L+L GGHGGHNG++S+++
Sbjct: 117 KPQTYMNLSGESVGPLSAYYKIPRERVLAIFDDLDLQFATLKLLPKGGHGGHNGMRSLID 176
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+F G ++F RLR GIGRP G M P A++LQKF++ E +D LQ GVE ++LL ++GL
Sbjct: 177 HFGGKQDFPRLRFGIGRPAGSMPPSAYVLQKFSSKEIEELDVVLQRGVEGVRLLTTQGLE 236
Query: 198 ESARHFNTIQK 208
++ +N K
Sbjct: 237 KAVSTWNKKSK 247
>gi|356524077|ref|XP_003530659.1| PREDICTED: peptidyl-tRNA hydrolase, chloroplastic-like [Glycine
max]
Length = 184
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 122/155 (78%), Gaps = 1/155 (0%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
A PWL VGLGNPG KY TRHN VGFEM+D AE++GISM TV KA FG+GF+GD PV+
Sbjct: 25 ASPWLIVGLGNPGKKYAATRHN-VGFEMVDTIAEAEGISMTTVSFKALFGKGFIGDVPVI 83
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
LAKPQT+MNLSGES G + +YYK+P+ +VLV DD+ LP L+L GGHGGHNG+KSV
Sbjct: 84 LAKPQTFMNLSGESVGTIVSYYKIPVKQVLVIVDDLDLPFAKLQLLPKGGHGGHNGMKSV 143
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN 170
+N+F+GN F RLRIGIGRPPG+MDP AF+L F
Sbjct: 144 INHFKGNTGFPRLRIGIGRPPGKMDPVAFVLHTFT 178
>gi|413946361|gb|AFW79010.1| hypothetical protein ZEAMMB73_673090 [Zea mays]
Length = 256
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 142/195 (72%), Gaps = 1/195 (0%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA 72
T +PWLFVGLGNPG YKGTRHN VGFEMIDA AE++GIS+++ KA G+G +GD
Sbjct: 56 TGAQKPWLFVGLGNPGRMYKGTRHN-VGFEMIDAIAEAEGISVSSKQFKAIVGKGLIGDV 114
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKPQT+MN SGES G L +Y+K+PLN+++V +DD+ LP LRL GGHGGHNG+
Sbjct: 115 PVMLAKPQTFMNASGESVGQLVSYFKIPLNQLVVIYDDLDLPFAKLRLLPKGGHGGHNGM 174
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+S++++ +R+F RLRIGIGRPP ++ F+L+ F +E ++ Q ++ +++++
Sbjct: 175 RSIVDHLNQSRDFGRLRIGIGRPPEELGAINFVLRSFTKQEKEELEVTFQRSLQAVRIMV 234
Query: 193 SKGLTESARHFNTIQ 207
+G +SA+ NT Q
Sbjct: 235 REGFNKSAQFVNTPQ 249
>gi|326501542|dbj|BAK02560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
A +PWLFVGLGNPG YKGTRHN VGFEMIDA AE++GIS++T K+ G+G +GD P
Sbjct: 52 AAPKPWLFVGLGNPGRMYKGTRHN-VGFEMIDAIAEAEGISVSTKQFKSMVGKGLIGDVP 110
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V+LAKPQT+MN SGES G L +Y+K+PLN+V++ +DD+ LP LRL GGHGGHNG++
Sbjct: 111 VMLAKPQTFMNASGESVGQLVSYFKIPLNQVVLIYDDLDLPFAKLRLLPKGGHGGHNGVR 170
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV+++ + +R+F RLRIGIGRP G M F+L+ F+ +E +D+ G+ ++++L
Sbjct: 171 SVIHHLKQSRDFPRLRIGIGRPTGMMGAIGFVLRAFSKEEQEELDSTFLRGLRAVRIMLL 230
Query: 194 KGLTESARHFNT 205
+G +SA NT
Sbjct: 231 EGFNKSATFVNT 242
>gi|326514970|dbj|BAJ99846.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
A +PWLFVGLGNPG YKGTRHN VGFEMIDA AE++GIS++T K+ G+G +GD P
Sbjct: 26 AAPKPWLFVGLGNPGRMYKGTRHN-VGFEMIDAIAEAEGISVSTKQFKSMVGKGLIGDVP 84
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V+LAKPQT+MN SGES G L +Y+K+PLN+V++ +DD+ LP LRL GGHGGHNG++
Sbjct: 85 VMLAKPQTFMNASGESVGQLVSYFKIPLNQVVLIYDDLDLPFAKLRLLPKGGHGGHNGVR 144
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV+++ + +R+F RLRIGIGRP G M F+L+ F+ +E +D+ G+ ++++L
Sbjct: 145 SVIHHLKQSRDFPRLRIGIGRPTGMMGAIGFVLRAFSKEEQEELDSTFLRGLRAVRIMLL 204
Query: 194 KGLTESARHFNT 205
+G +SA NT
Sbjct: 205 EGFNKSATFVNT 216
>gi|357132680|ref|XP_003567957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like
[Brachypodium distachyon]
Length = 256
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG YKGTRHN VGFEMIDA AE++GIS++ KA G+G +GD PV+L
Sbjct: 60 KPWLFVGLGNPGRMYKGTRHN-VGFEMIDAIAEAEGISISNRQFKAMVGKGLIGDVPVML 118
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MN SGES G L +Y+K+PLN+V+V +DD+ LP L L GGHGGHNG++SV+
Sbjct: 119 AKPQTFMNASGESVGMLVSYFKIPLNQVVVIYDDLDLPFAKLHLLPKGGHGGHNGMRSVI 178
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
++F+ R+F RLRIGIGRP G + F+L+ F+ +E +++ +G++ ++++L +G
Sbjct: 179 HHFKNTRDFPRLRIGIGRPTGMLGAINFVLRSFSQQEQEELNSTFCKGLQAVRIMLLEGF 238
Query: 197 TESARHFNT 205
+SA NT
Sbjct: 239 NKSATFVNT 247
>gi|125553210|gb|EAY98919.1| hypothetical protein OsI_20874 [Oryza sativa Indica Group]
Length = 235
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWL +GLGNPG YKGTRHN VGFEMIDA AE++GIS+++ K+ G+G +GD PV+L
Sbjct: 39 KPWLLIGLGNPGRMYKGTRHN-VGFEMIDAIAEAEGISVSSKQFKSMVGKGLIGDVPVML 97
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQTYMN SGES L +Y+K+PL++VLV +DD+ +P LRL GGHGGHNG++S++
Sbjct: 98 AKPQTYMNASGESVAQLVSYFKIPLSQVLVIYDDLDIPFAKLRLLPKGGHGGHNGMRSII 157
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ + +R+F RLRIGIGRP G++D F+L+ F +E ++ + ++ ++++L +G
Sbjct: 158 NHLKQSRDFPRLRIGIGRPTGKLDAIGFVLRSFTKEEQEELNLTINRSLQAVRIMLLEGF 217
Query: 197 TESARHFNTIQ 207
+ A NT Q
Sbjct: 218 NKGATFVNTPQ 228
>gi|302757433|ref|XP_002962140.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
gi|300170799|gb|EFJ37400.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
Length = 177
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 122/178 (68%), Gaps = 1/178 (0%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG K+ GTRHN VGFE ID A + I +NT+ CKA G+G + PVLL K
Sbjct: 1 WMIVGLGNPGSKFVGTRHN-VGFEAIDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVK 59
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSG++ PLA YY++ + +LV HDDM L +++ GG GGHNG+++++
Sbjct: 60 PQTYMNLSGDAVSPLALYYRVKPDNILVIHDDMNLDVAAMKMVPKGGPGGHNGMRNIIER 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
F+ N+ RLRIGIGRPPG MDPKA++LQKF + ID + G + ++L++S G
Sbjct: 120 FKDNKNIPRLRIGIGRPPGAMDPKAYVLQKFTQREKVEIDVCYERGADAVRLIMSDGF 177
>gi|302763245|ref|XP_002965044.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
gi|300167277|gb|EFJ33882.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
Length = 177
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 122/178 (68%), Gaps = 1/178 (0%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG K+ GTRHN VGFE ID A + I +NT+ CKA G+G + PVLL K
Sbjct: 1 WMIVGLGNPGSKFVGTRHN-VGFEAIDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVK 59
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSG++ PLA YY++ + +LV HDDM L +++ GG GGHNG+++++
Sbjct: 60 PQTYMNLSGDAVSPLALYYRVKPDNILVIHDDMDLDVAAMKMVPKGGPGGHNGMRNIIER 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
F+ N+ RLRIGIGRPPG MDPKA++LQKF + ID + G + ++L++S G
Sbjct: 120 FKDNKNIPRLRIGIGRPPGAMDPKAYVLQKFTQREKVEIDVCYERGADAVRLIMSDGF 177
>gi|6714302|gb|AAF25998.1|AC013354_17 F15H18.8 [Arabidopsis thaliana]
Length = 777
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 121/167 (72%), Gaps = 18/167 (10%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY+GTRHN VGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LA
Sbjct: 94 PWLIVGLGNPGKKYQGTRHN-VGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLA 152
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQT+MNLSGES +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 153 KPQTFMNLSGESV-----------------YDDLDLPFGKLRLLPKGGHGGHNGMRSIID 195
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 184
+G+R+F RLRIGIGRPPG+MD F+L++FN +E +D Q G
Sbjct: 196 RLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTG 242
>gi|356527496|ref|XP_003532345.1| PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like, partial [Glycine max]
Length = 204
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 132/199 (66%), Gaps = 10/199 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAPVL 75
PWL VGLGNPG KY GTR N VGFE+ID + ++GI +NT+ KA G + + P+L
Sbjct: 8 PWLIVGLGNPGYKYHGTRDN-VGFEIIDILSRAEGIQINTIQSKALIGISVLLEIEVPIL 66
Query: 76 LAKPQTYMNLSGESTG---PLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
LAKPQTYMN SGES PLAAYY+LPL +L+ + + +LRL+ GGHG HNGL
Sbjct: 67 LAKPQTYMNFSGESVSWAMPLAAYYQLPLRHILL----VCISYVILRLQPKGGHGHHNGL 122
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
K+VM + G +F RL +GIG PPG MD +A+LLQKF+ R++ID +L++ V ++ ++
Sbjct: 123 KNVMGHLDGCSDFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVGAVRTVV 182
Query: 193 SKGLTESARHFNTIQKYKH 211
G + FN QKYK+
Sbjct: 183 LNGFDQHVNRFNLGQKYKY 201
>gi|414866787|tpg|DAA45344.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 151
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG+KY+ TRHN VGF+MIDAFA+SQGI + T + KA FG+G V PVLL
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHN-VGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLL 93
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
AKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNGL
Sbjct: 94 AKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGSGRHNGLS 150
>gi|414866789|tpg|DAA45346.1| TPA: hypothetical protein ZEAMMB73_274141 [Zea mays]
Length = 152
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/115 (75%), Positives = 96/115 (83%), Gaps = 1/115 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG+KY+ TRHN VGF+MIDAFA+SQGI + T + KA FG+G V PVLL
Sbjct: 35 QPWLFVGLGNPGEKYQSTRHN-VGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLL 93
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
AKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG G HNG
Sbjct: 94 AKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGSGRHNG 148
>gi|374854021|dbj|BAL56914.1| aminoacyl-tRNA hydrolase [uncultured prokaryote]
Length = 235
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
P L VGLGNPG +Y RHN VGF +++ FA++ ++ + +A +G + V+LA
Sbjct: 38 PVLIVGLGNPGPEYARNRHN-VGFRVVEVFAQAHQMAFRRILHQALIAEGRLAGQRVILA 96
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQT+MNLSG S PL +YY++PLNR+LV +DDM LP G +RLR G GGHNG+KS++
Sbjct: 97 KPQTFMNLSGRSVRPLVSYYRVPLNRLLVVYDDMDLPLGAIRLRPRGSPGGHNGMKSIVQ 156
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G EF RLRIGIGRPPG M+P ++LQ F E ++ L + ++ + +GL
Sbjct: 157 AL-GTMEFPRLRIGIGRPPGHMNPADYVLQDFRPDEEEILEGVLHRATQAIRTFIEEGLE 215
Query: 198 ESARHFNT 205
+ FN
Sbjct: 216 AAMNRFNA 223
>gi|115453001|ref|NP_001050101.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|122247022|sp|Q10LI6.1|CRS2L_ORYSJ RecName: Full=CRS2-like protein, chloroplastic; AltName:
Full=Chloroplastic RNA splicing factor 2-like protein;
Flags: Precursor
gi|108708119|gb|ABF95914.1| Peptidyl-tRNA hydrolase, putative, expressed [Oryza sativa Japonica
Group]
gi|113548572|dbj|BAF12015.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|215707163|dbj|BAG93623.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 186
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/117 (74%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 74
V PWLFVGLGNPG+KY+ TRHN VGF+MID FA+SQGIS+ KA FG+G V PV
Sbjct: 57 VINPWLFVGLGNPGEKYQCTRHN-VGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPV 115
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
LLAKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG+G HNG
Sbjct: 116 LLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>gi|255634128|gb|ACU17427.1| unknown [Glycine max]
Length = 179
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL +GLGNPG+KY GTRHN VGFE+ID+ + ++GI MNT+ KA G G +G+ P+LLA
Sbjct: 49 PWLIIGLGNPGNKYHGTRHN-VGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLA 107
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGES GPLAAYY++PL +L+ D+ LP GVLRL+ NGGHG HNGLK+VM
Sbjct: 108 KPQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPNGGHGHHNGLKNVMG 167
Query: 138 NFRGNREFARL 148
+ G F RL
Sbjct: 168 HLDGCSAFPRL 178
>gi|384246371|gb|EIE19861.1| peptidyl-tRNA hydrolase [Coccomyxa subellipsoidea C-169]
Length = 198
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 122/187 (65%), Gaps = 9/187 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +Y TRHN VGF ++D A G S++ + A G+G VLLAK
Sbjct: 9 WLVVGLGNPGKQYADTRHN-VGFMLVDELARQLGASLDKLQHSAALGRGRFCGKRVLLAK 67
Query: 79 PQTYMNLSGESTG-----PLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
P T+MN SGES PLA ++PL RVLV +DD+ L G +RLR GGHGGHNG++
Sbjct: 68 PMTFMNNSGESANLKRLFPLA---QVPLERVLVVYDDLDLDSGAVRLRAKGGHGGHNGMR 124
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
S+ +F G+++F RLRIGIGRPPG +++LQ F R+ I A+QEG+++++ +L+
Sbjct: 125 SITQHFSGSKDFPRLRIGIGRPPGSQQVVSYVLQGFGRKERDEIYVAIQEGIDIVRAVLT 184
Query: 194 KGLTESA 200
G+ ++
Sbjct: 185 LGMEKAV 191
>gi|72160821|ref|YP_288478.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
gi|119391031|sp|Q47SW2.1|PTH_THEFY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71914553|gb|AAZ54455.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
Length = 213
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 119/181 (65%), Gaps = 2/181 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG KY G RHN VGF ++D A +G A + VGDAPV+LAK
Sbjct: 35 WLVVGLGNPGPKYAGNRHN-VGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAK 93
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P +YMNLSG L+A+YK+P++R++V HD++ +P L+L+ GG GHNGL+S+ +
Sbjct: 94 PASYMNLSGGPVAKLSAFYKVPVDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITAS 153
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ ++ R+R+GIGRPPG+MD +F+LQ F+ R+ +D + + ++ +++ GL +
Sbjct: 154 L-GSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEK 212
Query: 199 S 199
+
Sbjct: 213 A 213
>gi|320161445|ref|YP_004174669.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
gi|319995298|dbj|BAJ64069.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
Length = 208
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+P+L VGLGNPG +Y+ RHN GF ID A++ I+ V KA G ++L
Sbjct: 16 KPFLIVGLGNPGREYRENRHN-AGFMFIDRLAKALLITPGRVQSKAIIATGQYAGKRLIL 74
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQTYMNLSG+S LA +YK+P ++LV HDD+ LP G LRLR GG G G+ S++
Sbjct: 75 AKPQTYMNLSGQSVKGLAQFYKIPPEQILVAHDDLDLPLGTLRLRPGGGSAGQKGVSSII 134
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G +F RLRIGIGRPPGQMDP A++LQ F+ +E +D + V+ + G+
Sbjct: 135 QQL-GTSQFCRLRIGIGRPPGQMDPAAYVLQDFSEKEKEILDEVMDRAVKAALRFVEAGI 193
Query: 197 TESARHFN 204
+ FN
Sbjct: 194 QTAMNEFN 201
>gi|90657669|gb|ABD96967.1| hypothetical protein [Cleome spinosa]
Length = 257
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 125/209 (59%), Gaps = 12/209 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHN---QVGFEMIDAFAESQGISMNTVHCK-ATFGQGFVGDAP 73
PWL VGLGNPG+K+ GTRHN + FA S + K A F G + + P
Sbjct: 49 PWLIVGLGNPGNKFHGTRHNVRNNRPLLLNSGFASSTCWVLYQQCLKFAAFSTGAIEEVP 108
Query: 74 VLLAKPQTYMNLSGE-STGPLAAYYKLP-------LNRVLVFHDDMGLPCGVLRLRHNGG 125
VLLAKPQTYMN SG S L++ ++ + + +D+M LP GVL+L GG
Sbjct: 109 VLLAKPQTYMNFSGWISRCTLSSAFETHFAGKPHLVPHCSLIYDEMSLPNGVLKLIPKGG 168
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
+G HNGLKSV+ N G R F RL IGIG+PPG MD KAFLLQKF+ + R+++D L++G
Sbjct: 169 YGHHNGLKSVIGNLNGRRHFPRLCIGIGKPPGMMDLKAFLLQKFSPVERKQMDEGLEQGA 228
Query: 186 EVLKLLLSKGLTESARHFNTIQKYKHIRL 214
E +K L+ G E FN +QKYK R+
Sbjct: 229 EAVKTLVLNGFNEGISRFNLVQKYKFHRV 257
>gi|159487239|ref|XP_001701641.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280860|gb|EDP06616.1| predicted protein [Chlamydomonas reinhardtii]
Length = 172
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG Y TRHN +GF++ID A + GI + A G+G + VLL K
Sbjct: 2 WMIVGLGNPGSNYDDTRHN-IGFKVIDELAAAAGIDCRKLEKSAAVGKGELQGKQVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SGES LA +Y++P RVLV DD+ P +RLR GGHGGHNGL+S+++
Sbjct: 61 PVTFMNNSGESVAALAKFYRVPPGRVLVVADDLDQPTAQVRLRQRGGHGGHNGLRSIIDR 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 182
G ++F R++IGIGRP G + +++LQ FN R IDTA+Q
Sbjct: 121 MGGTQDFPRIKIGIGRPSGPIPIASYVLQPFNKAERPEIDTAVQ 164
>gi|325110026|ref|YP_004271094.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
gi|324970294|gb|ADY61072.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
Length = 192
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+GTRHN VGFE++ A S T +A + V LL P
Sbjct: 3 VIVGLGNPGGKYEGTRHN-VGFEVLYELARKWQASGVTRAHEAEIAEVHVAGEKTLLVAP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S G L +YK+ L +LV DD+ LPCG LRLR +G GG G++ ++ +
Sbjct: 62 QTFMNLSGRSVGSLVKFYKVDLEDLLVISDDLNLPCGQLRLRASGSSGGQKGIRDIIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F RLR+GIGRPPG+MD F+L++F A RE +D +++ V+ ++L L +G+T +
Sbjct: 122 -GTEDFPRLRVGIGRPPGRMDVSTFVLKRFLAEERETMDLTVRDAVDAVELWLREGVTAA 180
Query: 200 ARHFNT 205
NT
Sbjct: 181 MNKVNT 186
>gi|288921323|ref|ZP_06415605.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
gi|288347297|gb|EFC81592.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
Length = 195
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG Y G RHN VGF ++D AE G + + +A Q + P +LA
Sbjct: 9 PWLVVGLGNPGPAYAGNRHN-VGFMVVDLLAERTGARLRSHRSRADVDQVRLAGRPAVLA 67
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P+T+MN+SG L A+YK+ + V+V HD++ +P G +RL+ GG GHNGL+S+ +
Sbjct: 68 RPRTFMNVSGPPAAALRAFYKVDVAHVIVVHDELDIPFGAIRLKRGGGDNGHNGLRSITS 127
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+R++ R+R+GIGRPPG+MDP F+L+ F+ + R+ + + + ++ LL + L+
Sbjct: 128 SL-GSRDYLRVRVGIGRPPGRMDPADFVLRDFSTVERKELPLLVDSAADAVESLLQEELS 186
Query: 198 ESARHFNT 205
F+
Sbjct: 187 AVQNRFHA 194
>gi|302836311|ref|XP_002949716.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
gi|300265075|gb|EFJ49268.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
Length = 223
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG Y TRHN VGF +ID A GI + A G+G V VLL K
Sbjct: 59 WLIVGLGNPGSNYDETRHN-VGFMVIDELARQAGIDCRKLEKSAAVGKGEVHGKQVLLVK 117
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SGES LA +Y++P +RVLV DD+ P +R+R GGHGGHNGL+S+++
Sbjct: 118 PVTFMNNSGESVAALAKFYRVPPSRVLVVSDDLDQPVAQVRIRAKGGHGGHNGLRSIIDR 177
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 182
G ++F R+++GIGRP G M ++LQ F+ R ID A+Q
Sbjct: 178 MGGAQDFPRIKVGIGRPSGPMPIATYVLQPFSKAERPDIDLAVQ 221
>gi|158312638|ref|YP_001505146.1| peptidyl-tRNA hydrolase [Frankia sp. EAN1pec]
gi|158108043|gb|ABW10240.1| Aminoacyl-tRNA hydrolase [Frankia sp. EAN1pec]
Length = 195
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG Y G RHN VGF ++D AE G + + +A Q + V+LA
Sbjct: 9 PWLVVGLGNPGASYAGNRHN-VGFMVVDLLAERTGARLRSHRSRAEIDQVRLAGRSVVLA 67
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P+T+MN+SG + A+YK+ ++RV+V HD++ +P +RL+ GG GHNGL+S+ +
Sbjct: 68 RPRTFMNVSGPPVAAVRAFYKIDVSRVIVVHDELDIPFDAIRLKRGGGDNGHNGLRSITS 127
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+R++ R+R+GIGRPPG+MDP F+L+ F+ + R+ + + + ++ LL + L
Sbjct: 128 SL-GSRDYLRVRVGIGRPPGRMDPADFVLRDFSPVERKALPLIVDNAADAVESLLQEELA 186
Query: 198 ESARHFNT 205
+ F+
Sbjct: 187 AAQNRFHA 194
>gi|291298816|ref|YP_003510094.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
gi|290568036|gb|ADD41001.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 119/195 (61%), Gaps = 5/195 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN---TVHCKATFGQGFVGDAPV 74
P+L VGLGNPG KY G RHN VGF + D AE G SM V + G+ +G V
Sbjct: 5 PYLIVGLGNPGPKYAGNRHN-VGFMVADLLAERVGGSMKRAAKVRAEVCQGRLSIGGPQV 63
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+L KP TYMN+SG++ PLA ++K+P R++V HD++ LP GV+RL+ GG GHNGLKS
Sbjct: 64 ILVKPLTYMNVSGQAVAPLAVFFKVPAERIIVVHDELDLPYGVVRLKAGGGENGHNGLKS 123
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
G++ + R R GIGRPPG++DP AF+L+ F+ ++ + + + + ++
Sbjct: 124 TSQAL-GDKGYVRARFGIGRPPGRIDPAAFVLRDFSPAEKKELPLFVDLTADAVSEVVES 182
Query: 195 GLTESARHFNTIQKY 209
GL ++ F+ + Y
Sbjct: 183 GLVKAQNKFHALSLY 197
>gi|219849378|ref|YP_002463811.1| peptidyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
gi|254783860|sp|B8G3X3.1|PTH_CHLAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219543637|gb|ACL25375.1| Aminoacyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
Length = 188
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG++Y TRHN +GF ++ AE G++ K+ +G + V L K
Sbjct: 2 WLIVGLGNPGERYARTRHN-IGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSG++ L +YK+ P +LV +DD+ LP LRLR G G HNG++S++
Sbjct: 61 PQTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVG 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G EF RLRIGIG+PPGQMD ++L +F + L + +++++S+GLT
Sbjct: 121 QL-GTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLT 179
Query: 198 ESARHFNTI 206
+ +N +
Sbjct: 180 AAMNRYNPL 188
>gi|366163463|ref|ZP_09463218.1| peptidyl-tRNA hydrolase [Acetivibrio cellulolyticus CD2]
Length = 190
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 117/187 (62%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ +GLGNPG KY TRHN VGF+ ID ++ I++ V KA G G + A V+L K
Sbjct: 5 FVVIGLGNPGTKYDNTRHN-VGFDTIDRLSKKHNIAVTKVKHKAVIGDGTIEGARVILVK 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YK+P+ +++ +DD+ LP G LR+R G G HNG++SV+
Sbjct: 64 PQTFMNLSGESVREIMEWYKIPVENIIIVYDDIDLPVGKLRVRPKGSAGTHNGMRSVIYQ 123
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ + +F R+RIG+ +PP D F+L KF+ R+ ++ A++ V ++ ++ G+
Sbjct: 124 IQSD-DFPRIRIGVDKPPQGWDLANFVLSKFSPDERKNVEEAIENAVGAVETIIKSGVDN 182
Query: 199 SARHFNT 205
+ FNT
Sbjct: 183 AMNRFNT 189
>gi|291522022|emb|CBK80315.1| peptidyl-tRNA hydrolase [Coprococcus catus GD/7]
Length = 190
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 117/189 (61%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNP +Y+GTRHN VGFE ID A I + KA +G G++ V+LAKP
Sbjct: 3 LIVGLGNPTKQYEGTRHN-VGFETIDRIAAENQIRVEEKKHKALYGSGYIEGEKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES L+ YYK+P ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTFMNLSGESVRELSDYYKIPAENIIVIYDDISLDVGQLRIREKGSAGGHNGIKNIILHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R+++G+G P D ++L +++A R+ ID A +E E +K+++ + +
Sbjct: 122 -GTEVFPRIKVGVGEKPKGWDLADYVLGRYSAEDRKIIDEAQKEAAEAVKMMVMDDVRGA 180
Query: 200 ARHFNTIQK 208
+NT +K
Sbjct: 181 MNRYNTKKK 189
>gi|374711150|ref|ZP_09715584.1| peptidyl-tRNA hydrolase [Sporolactobacillus inulinus CASD]
Length = 189
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN +GFE+ID +E + I + A FG+G +GD VLL KP
Sbjct: 3 VIVGLGNPGSEYAHTRHN-IGFEVIDYLSEQESIRLTKNKFNALFGKGKIGDTDVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGE+ GPL ++KL +LV DDM LP G +RLR G GGHNG+KSV+ +
Sbjct: 62 LTYMNASGEAVGPLLHFFKLDTADLLVIQDDMDLPIGKIRLRQKGSAGGHNGIKSVIQHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EFAR+++GIG P + ++LQ F R ID A++ +K L++ ++
Sbjct: 122 -GTQEFARIKVGIGHPQHTREAVVRYVLQGFQGDDRAAIDAAIERSTSAVKAWLTQPFSQ 180
Query: 199 SARHFNT 205
+N+
Sbjct: 181 VMNMYNS 187
>gi|117929151|ref|YP_873702.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
gi|117649614|gb|ABK53716.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
Length = 196
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG Y RHN VGF ++D AE G+ + G + P +LA
Sbjct: 5 PWLVVGLGNPGPAYAKNRHN-VGFMVVDLLAERAGMRFTVHRTRTQLANGRLAGQPAMLA 63
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP +YMN SG L Y+++P R++V HD++ LP GVLR++ GG GHNGL+S+
Sbjct: 64 KPLSYMNQSGGPVAGLLHYFRIPRERLIVVHDELDLPFGVLRVKRGGGDAGHNGLRSITA 123
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL- 196
RG ++ R+R GIGRPP +DP ++L+ F+A R + L+E +V++ LLS GL
Sbjct: 124 ALRGA-DYLRVRFGIGRPPPHLDPAEYVLRDFSAAERAELGVHLEEAADVVESLLSVGLA 182
Query: 197 -TESARHFNTIQK 208
T++A H Q+
Sbjct: 183 ATQNAVHGRGRQR 195
>gi|145341531|ref|XP_001415860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576083|gb|ABO94152.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 189
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL GLGNPG K+ GTRHN VGFE++DA A GI + + +A G G +G + V+LAK
Sbjct: 1 WLICGLGNPGAKFAGTRHN-VGFEVVDALARRAGIELTSTKHRAVLGVGKLGRSAVVLAK 59
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSG+S + +K+ +R+++ +DD+ G LR++ +G HGGHNG++SV+++
Sbjct: 60 PQTFMNLSGKSVREMMRAFKIGKSRIVIVYDDLETKLGELRMKTSGSHGGHNGVRSVIDD 119
Query: 139 -FRGNREFARLRIGIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLK-LLLSKG 195
RG+R FAR++IGIGRP + ++L +F+ +++ A+++ VE L+ +LL
Sbjct: 120 ATRGDRSFARVKIGIGRPKDENTAVYEYVLSRFDEDDAVKVNGAVEDAVEALQEVLLDNK 179
Query: 196 LTESARHFNT 205
++ +NT
Sbjct: 180 FGDAMTRYNT 189
>gi|224079331|ref|XP_002305824.1| predicted protein [Populus trichocarpa]
gi|222848788|gb|EEE86335.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN VGFEMID A+++G+ MNT+ KA G G +G+ P+LLA
Sbjct: 49 PWLIVGLGNPGTKYHGTRHN-VGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLA 107
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
KPQ YMN SGES GPLAA+YK+PL +L+ +D+M LP G+LR++ GGHG HNG
Sbjct: 108 KPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNG 161
>gi|389571465|ref|ZP_10161560.1| peptidyl-tRNA hydrolase [Bacillus sp. M 2-6]
gi|388428865|gb|EIL86655.1| peptidyl-tRNA hydrolase [Bacillus sp. M 2-6]
Length = 188
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
FVGLGNPG +Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 4 FVGLGNPGKEYEKTRHN-VGFMTIDELSKKWDIPLNQSKFHGQYGTGFVSGQKVLLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE PL YY++PL + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECVRPLMDYYEIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G+ EF R RIGIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 122 GSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDISSAIQASVEACEAALTKPFLEVM 181
Query: 201 RHFN 204
FN
Sbjct: 182 NDFN 185
>gi|157690835|ref|YP_001485297.1| peptidyl-tRNA hydrolase [Bacillus pumilus SAFR-032]
gi|167011990|sp|A8F920.1|PTH_BACP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157679593|gb|ABV60737.1| stage V sporulation aminoacyl-tRNA hydrolase [Bacillus pumilus
SAFR-032]
Length = 188
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 109/184 (59%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
FVGLGNPG +Y+ TRHN VGF ID ++ I +N FG GFV VLL KP
Sbjct: 4 FVGLGNPGKEYEKTRHN-VGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE PL YY +PL + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G+ EF R RIGIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 122 GSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVM 181
Query: 201 RHFN 204
FN
Sbjct: 182 NDFN 185
>gi|194017971|ref|ZP_03056578.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
gi|194010308|gb|EDW19883.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
Length = 188
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 109/184 (59%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
F+GLGNPG +Y+ TRHN VGF ID ++ I +N FG GFV VLL KP
Sbjct: 4 FIGLGNPGKEYEKTRHN-VGFMTIDELSKKWDIPLNQSKFNGLFGTGFVSGQKVLLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE PL YY +PL + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G+ EF R RIGIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 122 GSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVM 181
Query: 201 RHFN 204
FN
Sbjct: 182 NDFN 185
>gi|402299310|ref|ZP_10818932.1| peptidyl-tRNA hydrolase [Bacillus alcalophilus ATCC 27647]
gi|401725514|gb|EJS98792.1| peptidyl-tRNA hydrolase [Bacillus alcalophilus ATCC 27647]
Length = 185
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG+KY GTRHN +GF++ID+ A++ GI +N K +G G V V L KP
Sbjct: 3 LIVGLGNPGEKYAGTRHN-IGFDIIDSCAKTLGIELNQAKFKGIYGTGIVNGEKVYLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL Y+++PL ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGESVRPLMDYFQIPLEDLVVIYDDLDLPAGKIRLRKKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+G+ RP ++L K++ R+ I+ ++++ ++ S E
Sbjct: 122 -GTQEFNRIRVGVDRPKNGEPIVHYVLGKYHPDERQAINESIEQATGAVEAWTSASFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNKFN 185
>gi|407979090|ref|ZP_11159912.1| peptidyl-tRNA hydrolase [Bacillus sp. HYC-10]
gi|407414306|gb|EKF35959.1| peptidyl-tRNA hydrolase [Bacillus sp. HYC-10]
Length = 188
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 109/184 (59%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
FVGLGNPG +Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 4 FVGLGNPGREYEKTRHN-VGFMTIDELSKKWDIPLNQSKFHGQYGTGFVSGQKVLLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE PL YY +PL + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECVRPLMDYYDIPLENLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G+ EF R RIGIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 122 GSPEFDRFRIGIGRPQNGMKVVDYVLGRFSDEEQPDISSAIQASVEACEAALTKPFLEVM 181
Query: 201 RHFN 204
FN
Sbjct: 182 NDFN 185
>gi|423090602|ref|ZP_17078891.1| aminoacyl-tRNA hydrolase [Clostridium difficile 70-100-2010]
gi|357556306|gb|EHJ37921.1| aminoacyl-tRNA hydrolase [Clostridium difficile 70-100-2010]
Length = 186
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN VGF++ID A+ IS+ + KA G+G VG VLL K
Sbjct: 2 YVVVGLGNPGKKYEKTRHN-VGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+ N
Sbjct: 61 PQTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITNC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F R+R+G+ +P D F+L +F + I+ AL++ + + ++ + +
Sbjct: 121 L-GSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDM 179
Query: 199 SARHFN 204
S +N
Sbjct: 180 SMNKYN 185
>gi|223974357|gb|ACN31366.1| unknown [Zea mays]
Length = 166
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 92/115 (80%), Gaps = 1/115 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG Y+GTRHN VGFEMID AE++GIS++++ KA G+G +GDA ++L
Sbjct: 51 KPWLFVGLGNPGKVYQGTRHN-VGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDASIML 109
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
AKPQT+MN SGES G L +Y+K+PL++V+V +DD+ LP LRL GGHGGHNG
Sbjct: 110 AKPQTFMNASGESVGQLVSYFKIPLSQVVVMYDDLDLPFAKLRLLPKGGHGGHNG 164
>gi|358061579|ref|ZP_09148233.1| peptidyl-tRNA hydrolase [Clostridium hathewayi WAL-18680]
gi|356700338|gb|EHI61844.1| peptidyl-tRNA hydrolase [Clostridium hathewayi WAL-18680]
Length = 191
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 119/187 (63%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNP +Y TRHN VGF +ID A+ GI ++ +A G+G + V+LAK
Sbjct: 2 YIIVGLGNPTKEYDKTRHN-VGFSVIDVLADRIGIDVSEKKHRALCGKGMLEGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YK+ + V++ +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 61 PQTFMNLSGESVRAMVDFYKVSPDEVIIVYDDISLEPGQLRIRTKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+++G+G P MD ++L +F+ +E +D A +E + + +++S+G+
Sbjct: 121 L-GTQEFPRIKVGVGEKPKYMDLADYVLSRFSKGEQELMDDAFREAADAVAMMISEGMDA 179
Query: 199 SARHFNT 205
+ HFN
Sbjct: 180 AMNHFNA 186
>gi|415883946|ref|ZP_11545975.1| peptidyl-tRNA hydrolase [Bacillus methanolicus MGA3]
gi|387591741|gb|EIJ84058.1| peptidyl-tRNA hydrolase [Bacillus methanolicus MGA3]
Length = 186
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG Y TRHN +GFE+ID +ES I ++ K +G GFV ++L KP
Sbjct: 3 LIVGLGNPGKLYDKTRHN-IGFEVIDRLSESLKIPLDQAKLKGIYGMGFVNGEKLILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES + YY + L +LV +DD+ LP G +RLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGESIRAVMDYYDIALEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSTIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G++EF R+R+GI RPP M ++L +F +E +D +++ E + L K +
Sbjct: 122 -GSQEFNRIRVGIDRPPAGMSVVDYVLDRFREDEQEIMDDVIKKCAEACEAWLQKPFIQV 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNEYN 185
>gi|126701126|ref|YP_001090023.1| peptidyl-tRNA hydrolase [Clostridium difficile 630]
gi|254977127|ref|ZP_05273599.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-66c26]
gi|255094456|ref|ZP_05323934.1| peptidyl-tRNA hydrolase [Clostridium difficile CIP 107932]
gi|255102712|ref|ZP_05331689.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-63q42]
gi|255308533|ref|ZP_05352704.1| peptidyl-tRNA hydrolase [Clostridium difficile ATCC 43255]
gi|255316207|ref|ZP_05357790.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-76w55]
gi|255518869|ref|ZP_05386545.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-97b34]
gi|255652048|ref|ZP_05398950.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-37x79]
gi|260685022|ref|YP_003216307.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260688680|ref|YP_003219814.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
gi|306521785|ref|ZP_07408132.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-32g58]
gi|384362696|ref|YP_006200548.1| peptidyl-tRNA hydrolase [Clostridium difficile BI1]
gi|119390926|sp|Q181A2.1|PTH_CLOD6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115252563|emb|CAJ70406.1| Peptidyl-tRNA hydrolase (PTH) [Clostridium difficile 630]
gi|260211185|emb|CBA66658.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260214697|emb|CBE07348.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
Length = 186
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN VGF++ID A+ IS+ + KA G+G VG VLL K
Sbjct: 2 YVVVGLGNPGKKYEKTRHN-VGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+
Sbjct: 61 PQTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F R+R+G+ +P D F+L +F + I+ AL++ + + ++ + +
Sbjct: 121 L-GSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDM 179
Query: 199 SARHFN 204
S +N
Sbjct: 180 SMNKYN 185
>gi|358463544|ref|ZP_09173579.1| Peptidyl-tRNA hydrolase [Frankia sp. CN3]
gi|357070066|gb|EHI79848.1| Peptidyl-tRNA hydrolase [Frankia sp. CN3]
Length = 195
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +Y TRHN G+ ++DA AE G + + +A Q +G V+LA+
Sbjct: 9 WLVVGLGNPGAEYAATRHN-AGYLVVDALAERHGARLRSHKARADADQIRLGGEAVVLAR 67
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
+TYMN+SG L A++K+ R++V HD++ +P G +RL+ GG GHNGL+S+ ++
Sbjct: 68 TRTYMNVSGPPVASLRAFFKVDPARLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSITSS 127
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G R++ R+R GIGRPPG+MDP F+L+ F R+ + + + ++ L+ +GL
Sbjct: 128 L-GTRDYLRVRFGIGRPPGRMDPADFVLRDFAVPERKEVPFLVDRAADAVEALVGEGLEP 186
Query: 199 SARHFNTI 206
+ F+T+
Sbjct: 187 AQNRFHTL 194
>gi|86742630|ref|YP_483030.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
gi|119390941|sp|Q2J5Z1.1|PTH_FRASC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86569492|gb|ABD13301.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
Length = 197
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG Y G RHN GF ++D AE G + + +A + + A +LA
Sbjct: 10 PWLVAGLGNPGPTYAGNRHN-AGFMVVDLLAERTGSRLKSHRSRADVAETRLAGARAVLA 68
Query: 78 KPQTYMNLSGESTGPLAA---YYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+P ++MNLSG GP+AA +YK+ ++R++V HD++ +P G +RL+ GG GHNGL+S
Sbjct: 69 RPLSFMNLSG---GPVAAARSFYKVEVSRLIVVHDELDIPFGAVRLKRGGGDNGHNGLRS 125
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ + G R++ R+R+GIGRPPG+MDP F+L+ F + R + L+ + +++L++
Sbjct: 126 ISSAL-GTRDYLRVRVGIGRPPGRMDPADFVLRDFTSTERRELPLLLEHAADSVEMLIAD 184
Query: 195 GLTESARHFNTI 206
GL + ++ +
Sbjct: 185 GLEPAQNRYHAL 196
>gi|225028226|ref|ZP_03717418.1| hypothetical protein EUBHAL_02498 [Eubacterium hallii DSM 3353]
gi|224954538|gb|EEG35747.1| aminoacyl-tRNA hydrolase [Eubacterium hallii DSM 3353]
Length = 717
Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 120/196 (61%), Gaps = 5/196 (2%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
R + VGLGNP D+YKGTRHN VG+ ID AE+ I++N KA G G +G + VLL
Sbjct: 521 RMKVIVGLGNPTDQYKGTRHN-VGYMAIDRIAEANRININQHKFKAMVGSGIIGGSKVLL 579
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP TYMNLSGES P+ +YKL L+ +LV +DD+ L G+LRLR G GGHNG+KS++
Sbjct: 580 VKPLTYMNLSGESIRPIMDFYKLDLSDILVIYDDISLEPGMLRLRTKGSAGGHNGMKSII 639
Query: 137 NNFRGNREFARLRIGIG--RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ G+ F R+R+GIG + PGQ D ++L F +E + AL + + +L
Sbjct: 640 KHLGGD-TFPRIRVGIGGEKHPGQ-DLADYVLGHFKDDEKELLSDALDKAEKAAELFAQD 697
Query: 195 GLTESARHFNTIQKYK 210
+E+ ++ +K +
Sbjct: 698 EFSEAMNKYSVGKKKR 713
>gi|326202451|ref|ZP_08192320.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
gi|325987569|gb|EGD48396.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
Length = 189
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG K++ TRHN VGF+ ID + I ++ + KA +G+G + +L K
Sbjct: 5 YLLVGLGNPGTKFENTRHN-VGFDTIDYISAKYNIKLSRIGFKAVYGEGEIEGVRTILVK 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YKLP+ R++V +DD+ L G +R+R G G HNG+KS++
Sbjct: 64 PQTFMNLSGESVREIVDWYKLPVERLVVIYDDIDLEPGKIRVRPKGSSGTHNGMKSIIYQ 123
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +R F R+RIGIGR P + D ++L KF+ R+ ID ++++ + + G +
Sbjct: 124 LQDDR-FPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSVEKAAQAAIMTAKSGPEK 182
Query: 199 SARHFN 204
+ +FN
Sbjct: 183 AMNNFN 188
>gi|387928177|ref|ZP_10130855.1| peptidyl-tRNA hydrolase [Bacillus methanolicus PB1]
gi|387587763|gb|EIJ80085.1| peptidyl-tRNA hydrolase [Bacillus methanolicus PB1]
Length = 186
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GFE+ID +E I ++ K +G GFV ++L KP
Sbjct: 3 LIVGLGNPGKQYDKTRHN-IGFEVIDKLSELLNIPLDQAKLKGNYGMGFVNGEKLILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES + YY + L +LV +DD+ LP G +RLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGESICAVMDYYDIALEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G++EF R+R+GI RPP M ++L +F +E +D ++ E + L K +
Sbjct: 122 -GSQEFNRIRVGIDRPPAGMSVVDYVLGRFREDEQEIMDDVIKTCAEACEAWLQKPFLQV 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNEYN 185
>gi|333977672|ref|YP_004515617.1| peptidyl-tRNA hydrolase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821153|gb|AEG13816.1| Peptidyl-tRNA hydrolase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 190
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 3/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +Y TRHN VGF ++D A I ++ V +A GQG V ++LAK
Sbjct: 2 WLVVGLGNPGPEYARTRHN-VGFMVVDRLARDLDIKIDRVFLRALVGQGQVAGQRLVLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SGE+ L +YKL +++LV DD+ LP G LRLR +GG GGH GL+S++
Sbjct: 61 PLTYMNRSGEAVAALLNWYKLTPSQLLVVSDDLDLPTGRLRLRKSGGDGGHRGLRSII-E 119
Query: 139 FRGNREFARLRIGIGRPPG-QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G+REFARLR+GIGRP G + ++L +F ++ A+ + + +++ L++GL
Sbjct: 120 LVGSREFARLRVGIGRPSGPDCEVVDWVLSRFTEEEGPLMEKAVADASKAVQVALTRGLD 179
Query: 198 ESARHFNT 205
+ FN
Sbjct: 180 AAMNLFNA 187
>gi|312194511|ref|YP_004014572.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
gi|311225847|gb|ADP78702.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
Length = 195
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +Y TRHN GF ++D AE G + + +A Q + +LA+
Sbjct: 9 WLVVGLGNPGPEYASTRHN-AGFLVVDLLAERHGARLRSHKARADAAQLRLAGVSAVLAR 67
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+TYMN+SG L +++K+ RV+V HD++ +P G +RL+ GG GHNGL+S+ ++
Sbjct: 68 PRTYMNVSGPPVAALRSFFKVDPARVIVVHDELDIPFGAVRLKRGGGDNGHNGLRSITSS 127
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G R++ R+R GIGRPPG+MDP F+L+ F R+ + + + ++ L+++GL
Sbjct: 128 L-GTRDYLRVRFGIGRPPGRMDPADFVLRDFAVPERKELPFLVDRAADAVEALVAEGLEP 186
Query: 199 SARHFNTI 206
+ F+ +
Sbjct: 187 AQNRFHAL 194
>gi|383763137|ref|YP_005442119.1| peptidyl-tRNA hydrolase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381383405|dbj|BAM00222.1| peptidyl-tRNA hydrolase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 193
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 118/190 (62%), Gaps = 8/190 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA----PVL 75
+ VGLGNPG +Y RHN +GF+ I+ A+ GI+++ V +A G GFV VL
Sbjct: 6 MIVGLGNPGPQYSRNRHN-IGFQCIELCAQRWGIALDRVQMRAQTGSGFVMREGLRQKVL 64
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP T+MN SGE+ PLA ++++ + +LV HDD+ LP G LRLR G GG NG++S+
Sbjct: 65 LVKPLTFMNASGEAVAPLARFHRIDPSSILVIHDDLDLPAGKLRLRPGGSSGGQNGVRSI 124
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG-VEVLKLLLSK 194
+ + G +EFAR+R+GIGRPP MDP A++LQ F+ E I L+E VE L +
Sbjct: 125 IEHL-GTQEFARIRVGIGRPPHGMDPAAYVLQNFSE-EEEAIFAPLRERVVEAAACWLFE 182
Query: 195 GLTESARHFN 204
G+ + FN
Sbjct: 183 GIERAMNRFN 192
>gi|163847223|ref|YP_001635267.1| peptidyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222525064|ref|YP_002569535.1| peptidyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
gi|189038282|sp|A9WBS1.1|PTH_CHLAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783861|sp|B9LE93.1|PTH_CHLSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163668512|gb|ABY34878.1| Aminoacyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222448943|gb|ACM53209.1| Aminoacyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
Length = 188
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG++Y TRHN +GF +D AE G++ + +G + V+LAK
Sbjct: 2 WLIVGLGNPGERYARTRHN-IGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSG++ L +YK+ P +LV +DD+ LP LR+R G G HNG++S++
Sbjct: 61 PQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G EF RLR+GIG+PPG+MD ++L +F + L + ++++L +GLT
Sbjct: 121 QL-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLT 179
Query: 198 ESARHFNTI 206
+ +N +
Sbjct: 180 TAMNRYNPL 188
>gi|423080832|ref|ZP_17069449.1| aminoacyl-tRNA hydrolase [Clostridium difficile 002-P50-2011]
gi|423087233|ref|ZP_17075622.1| aminoacyl-tRNA hydrolase [Clostridium difficile 050-P50-2011]
gi|357545171|gb|EHJ27151.1| aminoacyl-tRNA hydrolase [Clostridium difficile 050-P50-2011]
gi|357552321|gb|EHJ34095.1| aminoacyl-tRNA hydrolase [Clostridium difficile 002-P50-2011]
Length = 186
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN VGF++ID A+ IS+ + KA G+G VG VLL K
Sbjct: 2 YVVVGLGNPGKKYEKTRHN-VGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+
Sbjct: 61 PQTYMNLSGETLIDIYKYYKIDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F R+R+G+ +P D F+L +F + I+ AL++ + ++ + +
Sbjct: 121 L-GSNDFPRVRVGVSKPEVGQDLADFVLSRFRKEESDNINEALEKAAYAIDSIIRENIDM 179
Query: 199 SARHFN 204
S +N
Sbjct: 180 SMNKYN 185
>gi|152973899|ref|YP_001373416.1| peptidyl-tRNA hydrolase [Bacillus cytotoxicus NVH 391-98]
gi|189038278|sp|A7GJW3.1|PTH_BACCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152022651|gb|ABS20421.1| Aminoacyl-tRNA hydrolase [Bacillus cytotoxicus NVH 391-98]
Length = 186
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ L ++ +DD+ LP G LRLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F A ++ A+++ + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEEMVDVNHAIEKAANACEEWLNKSFLQV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNDFNN 186
>gi|296271107|ref|YP_003653739.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
gi|296093894|gb|ADG89846.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
Length = 209
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
+ R WL VGLGNPG +Y RHN GF + D A G +A +G + P
Sbjct: 10 STPRRWLIVGLGNPGPEYAMNRHN-AGFMVADELANRIGGRFTVHKTRAQVAEGRLSGVP 68
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V+LAKP +YMNLSG LA YYK+ ++V HD++ +P G LR + GG GHNGLK
Sbjct: 69 VVLAKPLSYMNLSGGPVKALADYYKIGPENIVVIHDELDIPFGALRAKTGGGDNGHNGLK 128
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
S+ G R+++R+R GIGRPPG+MDP ++L+ F R+ + + ++++ LL+
Sbjct: 129 SITKAL-GTRDYSRIRFGIGRPPGRMDPATYVLRDFATAERKDLPFLIDRAADMVESLLT 187
Query: 194 KGLTESARHFNTIQKY 209
+GL + F+ Y
Sbjct: 188 EGLAATQNKFHGSDLY 203
>gi|266619806|ref|ZP_06112741.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
gi|288868592|gb|EFD00891.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
Length = 192
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNP +Y+ TRHN VGFE ID A+ G ++ KA +G+G++G V+LAK
Sbjct: 2 YLIAGLGNPTREYEKTRHN-VGFEAIDILADKAGTTVTEKKHKALYGKGYIGGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES +A +YK+ +++ DD+ L G LR+R G GGHNGLK+++++
Sbjct: 61 PQTYMNLSGESIREIADFYKIEPENIIILCDDINLSEGQLRIRLKGSAGGHNGLKNIISH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+RIG+G P MD ++L +F + ++ A ++ + +++ +G
Sbjct: 121 L-GTQEFPRIRIGVGEKPRGMDLADYVLGRFPKEQQAVMEEAYRDAADAACMMIEEGADA 179
Query: 199 SARHFNTIQK 208
+ H+N K
Sbjct: 180 AMNHYNRKHK 189
>gi|403238486|ref|ZP_10917072.1| peptidyl-tRNA hydrolase [Bacillus sp. 10403023]
Length = 187
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN VGF++ID +E I ++ +GQG V VLL KP
Sbjct: 3 LIVGLGNPGRQYEETRHN-VGFKVIDELSEQLHIPLDKAKFNGVYGQGIVNGEKVLLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YY + + +LV +D++ LP G +RLR G GGHNG+KS++++
Sbjct: 62 LTYMNLSGESIRPLMDYYDILVEDILVVYDELDLPVGKIRLREKGSAGGHNGMKSIIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+RIGI RP M ++L +F A + I +A+Q + +S +
Sbjct: 122 -GTQEFKRIRIGISRPTNGMKIADYVLGRFQAEEVQDIKSAVQNSAVAAEKWVSAPFLQV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNEFNA 186
>gi|255657459|ref|ZP_05402868.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-23m63]
gi|296449054|ref|ZP_06890844.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296879877|ref|ZP_06903850.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
gi|296262147|gb|EFH08952.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296429166|gb|EFH15040.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
Length = 186
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN VGF++ID A+ IS+ + KA G+G VG VLL K
Sbjct: 2 YVVVGLGNPGKKYEKTRHN-VGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+
Sbjct: 61 PQTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F R+R+G+ +P D F+L +F + I+ AL++ + ++ + +
Sbjct: 121 L-GSNDFPRVRVGVSKPEVGQDLADFVLSRFRKEESDNINEALEKAAYAIDSIIRENIDM 179
Query: 199 SARHFN 204
S +N
Sbjct: 180 SMNKYN 185
>gi|331090627|ref|ZP_08339478.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401067|gb|EGG80662.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 190
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 119/191 (62%), Gaps = 3/191 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNP +Y+GTRHN VGF++IDA A+ I+M+ +A G+G + V+LAK
Sbjct: 2 YIIVGLGNPTSQYEGTRHN-VGFDVIDAIADKYNITMDIRKHRAFCGKGIIAGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L Y+K+ + ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESVRSLVDYFKIDEEQELIVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+ F R+++G+G P Q D ++L F+ RE ++ Q V+ ++L+++ +
Sbjct: 121 HL-GHSVFPRIKVGVGEKPKQYDLADYVLGHFSKAEREVMEDGYQNAVKAIELMVNDEIE 179
Query: 198 ESARHFNTIQK 208
+ FN K
Sbjct: 180 TAMNEFNKKTK 190
>gi|307244017|ref|ZP_07526136.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
gi|306492541|gb|EFM64575.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
Length = 186
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN GF+ +D AE GI ++ + KA G+G +G V+L K
Sbjct: 2 YIIVGLGNPGKKYEHTRHN-AGFDALDILAEEYGIKIDKIKHKALIGEGRIGSEKVVLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES + +YK+ ++ ++V +DD+ L G LR+R G G HNG+KS++
Sbjct: 61 PQTYMNLSGESVQSVFQFYKVDMDHLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIKC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G++EF R+R+G+ RP D F+L + + E + + L++ V+ ++ ++ +
Sbjct: 121 L-GSQEFPRVRVGVSRPDPNRDLADFVLSRVSKDQAEDMKSGLEKAVKTVEEIIRTDIDM 179
Query: 199 SARHFN 204
+ +N
Sbjct: 180 AMNKYN 185
>gi|120405738|ref|YP_955567.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
gi|166229427|sp|A1TEG1.1|PTH_MYCVP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119958556|gb|ABM15561.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
Length = 192
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 122/197 (61%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN GF ++D A+ G VH K A G +
Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHN-AGFMVVDILADRMGEKFK-VHKKSGAEVATGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKP+ YMN SG GPLA +Y + V++ HD++ + G +RL+ GG GHNGL
Sbjct: 59 PVVLAKPRVYMNESGRQVGPLAKFYSVAPADVVIVHDELDIDFGRIRLKAGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + GN +F R+R+GIGRPPG +F+L+ FN++ R+ + T L++ + +LL+
Sbjct: 119 RSVASALGGN-DFQRVRVGIGRPPGHKSGASFVLENFNSVERKEVPTILEQAADATELLV 177
Query: 193 SKGLTESARHFNTIQKY 209
++GL E A+ NT+ +
Sbjct: 178 AQGL-EPAQ--NTVHAW 191
>gi|111225610|ref|YP_716404.1| peptidyl-tRNA hydrolase [Frankia alni ACN14a]
gi|123142574|sp|Q0RCD6.1|PTH_FRAAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|111153142|emb|CAJ64889.1| Peptidyl-tRNA hydrolase (PTH) [Frankia alni ACN14a]
Length = 197
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG Y G RHN GF ++D AE G + + +A + + +LA
Sbjct: 10 PWLVVGLGNPGPGYAGNRHN-AGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGTRAILA 68
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P ++MNLSG + +YK+ RV+V HD++ +P G +RL+ GG GHNGL+S+ +
Sbjct: 69 RPLSFMNLSGGPVSAVRTFYKIDPARVIVVHDELDIPFGSVRLKRGGGDNGHNGLRSISS 128
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+MDP ++L+ F A R + L+ + +++L++ GL
Sbjct: 129 AL-GTRDYLRVRVGIGRPPGRMDPADYVLRDFAAAERRELPLLLEHSADSVEMLITDGLE 187
Query: 198 ESARHFNTI 206
+ ++ +
Sbjct: 188 PTQNRYHAL 196
>gi|118444703|ref|YP_877115.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
gi|166199328|sp|A0PXL3.1|PTH_CLONN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118135159|gb|ABK62203.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
Length = 188
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN VGF++ID +E I +N K +G G + + V+L K
Sbjct: 2 FLIVGLGNPGKEYEHTRHN-VGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +YK+P V+V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 PLTYMNLSGESIKEVTDFYKIPKENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
F G+ F R+++G+G+P Q D + +L KFN RE + + + + ++ KG E
Sbjct: 121 F-GSDVFPRIKVGVGQPV-QRDLVSHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAE 178
Query: 199 SARHFN 204
+ FN
Sbjct: 179 AMNKFN 184
>gi|334338784|ref|YP_004543764.1| peptidyl-tRNA hydrolase [Desulfotomaculum ruminis DSM 2154]
gi|334090138|gb|AEG58478.1| peptidyl-tRNA hydrolase [Desulfotomaculum ruminis DSM 2154]
Length = 187
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 6/188 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GF +IDA A G ++ KA GQ +G V+LAKP
Sbjct: 3 LIVGLGNPGGQYAQTRHN-IGFMVIDALARELGATVEKNQHKALVGQVNIGSEKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L +YKL +LV DDM LP G LR+R NGG GG GLKS+M +
Sbjct: 62 QTYMNLSGQAVVALMNWYKLLPEDLLVISDDMDLPPGRLRIRMNGGAGGQKGLKSIM-DL 120
Query: 140 RGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G ++F+R+R+GIGRP G +D +L KF+ ++I A++ V+ K+ + +G E
Sbjct: 121 TGTQDFSRMRVGIGRPEHGAVD---HVLGKFDDQELQQIQPAIEAAVKAAKIWVLEGPVE 177
Query: 199 SARHFNTI 206
+ +N +
Sbjct: 178 AMNQYNRV 185
>gi|169825683|ref|YP_001695841.1| peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
gi|168990171|gb|ACA37711.1| Peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
Length = 203
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 7/200 (3%)
Query: 5 RFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATF 64
RF RR + VGLGNPG Y+ TRHN +GF++IDA AE G + +
Sbjct: 10 RFERREVLMKI-----IVGLGNPGKPYEHTRHN-IGFDVIDALAEKWGTPLTNSKFNGMY 63
Query: 65 GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 124
+ VLL KP TYMNLSGE GPL Y+ + + ++V +DD+ L G LRLR G
Sbjct: 64 TTVHRPEGKVLLVKPLTYMNLSGECVGPLMDYFDIDVEDLIVIYDDLDLETGKLRLRQKG 123
Query: 125 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 184
GGHNG+KS++ + G +EF R+R+GI RPP M ++L KF+ + ++ A+++
Sbjct: 124 SAGGHNGIKSLIQHL-GTQEFNRIRVGISRPPAGMKVADYVLGKFSKEDQVSMNEAIEKS 182
Query: 185 VEVLKLLLSKGLTESARHFN 204
V +++ LSK + HFN
Sbjct: 183 VNAVEVSLSKPFLDVMNHFN 202
>gi|160939695|ref|ZP_02087043.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
gi|158437486|gb|EDP15250.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
Length = 230
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 117/186 (62%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+ TRHN VGFE+ID A+ G ++ K +G+G +G VLL K
Sbjct: 43 YIIAGLGNPTREYEKTRHN-VGFEVIDVLADRLGTTVEEKKFKGCYGRGIIGGQKVLLLK 101
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES A +YK+ +++ +DD+ L G LR+R G GGHNG+K+++++
Sbjct: 102 PQTFMNLSGESVRAAADFYKVDPEHIIIVYDDISLDVGQLRIRKKGSAGGHNGIKNIISH 161
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+++G+G P +MD ++L +F+ R ++ A +E +++++++G
Sbjct: 162 L-GTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAVMEDAFREAAGAVEMMITQGADA 220
Query: 199 SARHFN 204
+ FN
Sbjct: 221 AMNQFN 226
>gi|309789598|ref|ZP_07684179.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG-6]
gi|308228334|gb|EFO81981.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG6]
Length = 189
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 109/188 (57%), Gaps = 3/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL +GLGNPG+KY TRHN +GF +DA A+ G+ T + +G + V LAK
Sbjct: 2 WLLIGLGNPGEKYDRTRHN-IGFACLDALAKRHGLEFRTKRANSLVAEGSIAGQRVALAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMN SG + L ++YK+ P +LV +DD+ LP LRLR G G HNG++S++
Sbjct: 61 PQTYMNESGRAVSALRSWYKIEPAQDLLVIYDDLDLPFARLRLRERGSSGTHNGMRSIVA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G+ F RLR+GI +PPG+MD A++L +FN +I + +++L G+
Sbjct: 121 QL-GSNAFPRLRVGIDQPPGKMDAAAYVLSRFNKEEEAQIPDLCDRVADAAEVVLRDGVI 179
Query: 198 ESARHFNT 205
+ +N
Sbjct: 180 AAMNRYNA 187
>gi|456012107|gb|EMF45824.1| Peptidyl-tRNA hydrolase [Planococcus halocryophilus Or1]
Length = 187
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG Y+ TRHN +GF++ID A + K + + V+L KP
Sbjct: 3 LIIGLGNPGKAYEDTRHN-IGFKVIDYLASQWNAPLTQSKFKGMYSVSHRPEGKVMLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES G L YY + L ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGESVGALMDYYNIDLKDIIVIYDDLDLPTGQLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
GN EF RLRIGI RPP M ++LQ+F+ + A+++ + LSK E
Sbjct: 122 -GNLEFNRLRIGISRPPAGMKVPDYVLQRFSKEEIPEMTAAIKKSAAACETWLSKPYVEV 180
Query: 200 ARHFNTI 206
FN I
Sbjct: 181 MNEFNGI 187
>gi|228937354|ref|ZP_04100001.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228970240|ref|ZP_04130900.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976810|ref|ZP_04137223.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|384184134|ref|YP_005570030.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410672423|ref|YP_006924794.1| peptidyl-tRNA hydrolase Pth [Bacillus thuringiensis Bt407]
gi|423387016|ref|ZP_17364271.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-2]
gi|423526650|ref|ZP_17503095.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB1-1]
gi|452196427|ref|YP_007476508.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228782906|gb|EEM31071.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|228789475|gb|EEM37394.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822312|gb|EEM68293.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326937843|gb|AEA13739.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401630270|gb|EJS48076.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-2]
gi|402455143|gb|EJV86927.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB1-1]
gi|409171552|gb|AFV15857.1| peptidyl-tRNA hydrolase Pth [Bacillus thuringiensis Bt407]
gi|452101820|gb|AGF98759.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 207
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 6/206 (2%)
Query: 4 NRFLRRGFCT----AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH 59
N+F R F + + R L VGLGNPG +Y+ TRHN +GF ID A+ IS+N
Sbjct: 4 NQFWLRLFVSKKESSGTRMKLIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQK 62
Query: 60 CKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLR 119
K FG GFV V+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G LR
Sbjct: 63 FKGVFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLR 122
Query: 120 LRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT 179
LR G GGHNG+KS +++ G +EF R+R+GI RP M ++L +F + ++
Sbjct: 123 LRMKGSAGGHNGVKSTISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNH 181
Query: 180 ALQEGVEVLKLLLSKGLTESARHFNT 205
++++ + + L+K + FN+
Sbjct: 182 SIEKAADACEEWLNKPFLQIMNTFNS 207
>gi|323490991|ref|ZP_08096185.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
gi|323395347|gb|EGA88199.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
Length = 187
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG Y+ TRHN +GF++ID A + K + + V+L KP
Sbjct: 3 LIIGLGNPGKTYEDTRHN-IGFKVIDYLASQWDAPLTQSKFKGMYSVSHRPEGKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES L YY + L ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGESVAALMDYYNIELKDIIVIYDDLDLPTGQLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
GN+EF RLRIGI RPP M ++LQ+F+ + A+++ + LSK E
Sbjct: 122 -GNQEFNRLRIGISRPPAGMKVPDYVLQRFSTEEIPEMTAAIKKSAAACETWLSKPYIEV 180
Query: 200 ARHFNTI 206
FN I
Sbjct: 181 MNEFNGI 187
>gi|365845743|ref|ZP_09386497.1| aminoacyl-tRNA hydrolase [Flavonifractor plautii ATCC 29863]
gi|364559189|gb|EHM37180.1| aminoacyl-tRNA hydrolase [Flavonifractor plautii ATCC 29863]
Length = 198
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG+KY+ TRHN VGF +D AE + + + +A VG VLL K
Sbjct: 13 WLVVGLGNPGEKYENTRHN-VGFLTVDELAERARVPVQKLKHRALTNTLEVGSVKVLLMK 71
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ G A +YKLP RVLV DD+ LP G LR+R G GGHNGLKS++ +
Sbjct: 72 PVTYMNLSGEAVGEAARFYKLPPERVLVISDDVSLPVGKLRIRKGGSAGGHNGLKSIIQH 131
Query: 139 FRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F R+++G+G+ P D ++L KF + I A+++ + ++ L+ +G
Sbjct: 132 L-GTDQFPRIKVGVGQKPHPDYDMADWVLSKFAGEDLKTITEAIRKAADAVECLIQEGPD 190
Query: 198 ESARHFN 204
++ FN
Sbjct: 191 KAMNRFN 197
>gi|240144342|ref|ZP_04742943.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
gi|257203686|gb|EEV01971.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
Length = 212
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF+++DA AE IS++ KA G+G + V+LAKP
Sbjct: 23 LIVGLGNPGKQYEHTRHN-IGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKP 81
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
QTYMNLSGES L YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 82 QTYMNLSGESVAELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIA- 140
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+++G+G P D +L F+A R ++ A+ VE +++++ G T+
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDAADRAEVEKAIGHAVEAAEMMIT-GETD 199
Query: 199 SARHFNTIQK 208
+A + ++K
Sbjct: 200 AAMNRYNVKK 209
>gi|355678112|ref|ZP_09060791.1| peptidyl-tRNA hydrolase [Clostridium citroniae WAL-17108]
gi|354812558|gb|EHE97173.1| peptidyl-tRNA hydrolase [Clostridium citroniae WAL-17108]
Length = 216
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 117/186 (62%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+ TRHN VGFE+ID A+ G ++ K +G+G +G VLL K
Sbjct: 29 YIIAGLGNPTREYEKTRHN-VGFEVIDVLADMLGTTVEEKKFKGLYGRGIIGGEKVLLLK 87
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES A +YK+ +++ +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 88 PQTFMNLSGESVKAAADFYKVDHEHIIIIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAH 147
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF+R+R+G+G P +MD ++L +F+ R ++ A ++ + + +++++ +
Sbjct: 148 L-GTQEFSRIRVGVGDKPKKMDLADYVLSRFSKEDRVLMEDAFKDASKAVNVMITESVDA 206
Query: 199 SARHFN 204
+ FN
Sbjct: 207 AMNQFN 212
>gi|295093546|emb|CBK82637.1| peptidyl-tRNA hydrolase [Coprococcus sp. ART55/1]
Length = 185
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY GTRHN VGF ++D AE I ++T KA G+G + V+LA P
Sbjct: 3 IIVGLGNPGAKYAGTRHN-VGFAVLDELAERHNIRIDTAKHKALIGKGIIDGEKVILAMP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES + +YK + ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 62 QTFMNLSGESVRAIMDFYKCTVEDLIVVYDDIDLDVGKLRIRQKGSAGGHNGMKNIIQHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G++EF R+R+G+G+ P MD ++L +F I + + ++ +L+ G +
Sbjct: 122 -GSQEFVRIRVGVGKKPDHMDLADYVLSRFGKEDLANIRESCGNACDAVETILADGTVAA 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNKFN 185
>gi|163938059|ref|YP_001642943.1| peptidyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|229131059|ref|ZP_04259972.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
gi|423456682|ref|ZP_17433532.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X1-1]
gi|423471699|ref|ZP_17448443.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-2]
gi|423485303|ref|ZP_17461990.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-2]
gi|423520191|ref|ZP_17496672.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-4]
gi|423556952|ref|ZP_17533255.1| peptidyl-tRNA hydrolase [Bacillus cereus MC67]
gi|163860256|gb|ABY41315.1| Aminoacyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|228652396|gb|EEL08320.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
gi|401128429|gb|EJQ36119.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X1-1]
gi|401135880|gb|EJQ43476.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-2]
gi|401155456|gb|EJQ62866.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-4]
gi|401194031|gb|EJR01028.1| peptidyl-tRNA hydrolase [Bacillus cereus MC67]
gi|402430797|gb|EJV62871.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-2]
Length = 207
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ +++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|116751072|ref|YP_847759.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
gi|116700136|gb|ABK19324.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
Length = 201
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 22 VGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 81
VGLGNPG +Y+ TRHN GF ++D A GI+M +A++G GFV VLLAKP T
Sbjct: 15 VGLGNPGPQYEHTRHN-AGFMVVDRLAAGFGIAMQERKFRASWGTGFVEGRKVLLAKPLT 73
Query: 82 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRG 141
YMNLSG + G + Y+ P RVLV HDD+ LPCG +RL GG GGH G+ S+M +
Sbjct: 74 YMNLSGAAVGEILKYFGFPSERVLVVHDDLDLPCGRVRLARKGGAGGHKGIASIMAHLN- 132
Query: 142 NREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 201
R+F RL++GIGRP ++++LQ A + + + G EV++ +L+ GL+ S
Sbjct: 133 TRDFPRLKLGIGRPLHGEPVESYVLQPPYAEDARKFEDMILLGEEVVRSVLAAGLSSSMN 192
Query: 202 HFN 204
+N
Sbjct: 193 DYN 195
>gi|229074113|ref|ZP_04207160.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
gi|229094773|ref|ZP_04225779.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|229100842|ref|ZP_04231654.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|229113726|ref|ZP_04243162.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|407708002|ref|YP_006831587.1| oligopeptide transporter, periplasmic-binding protein [Bacillus
thuringiensis MC28]
gi|423376674|ref|ZP_17353958.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1O-2]
gi|423439768|ref|ZP_17416674.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X2-1]
gi|423450071|ref|ZP_17426950.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5O-1]
gi|423462840|ref|ZP_17439608.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-1]
gi|423532196|ref|ZP_17508614.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB2-9]
gi|423542533|ref|ZP_17518923.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB4-10]
gi|423548764|ref|ZP_17525122.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB5-5]
gi|423621429|ref|ZP_17597207.1| peptidyl-tRNA hydrolase [Bacillus cereus VD148]
gi|228669723|gb|EEL25129.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|228682576|gb|EEL36641.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|228688641|gb|EEL42513.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|228709007|gb|EEL61133.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
gi|401127078|gb|EJQ34808.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5O-1]
gi|401168329|gb|EJQ75594.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB4-10]
gi|401174295|gb|EJQ81506.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB5-5]
gi|401263458|gb|EJR69583.1| peptidyl-tRNA hydrolase [Bacillus cereus VD148]
gi|401641313|gb|EJS59033.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1O-2]
gi|402421811|gb|EJV54058.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X2-1]
gi|402422968|gb|EJV55189.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6O-1]
gi|402465274|gb|EJV96956.1| peptidyl-tRNA hydrolase [Bacillus cereus HuB2-9]
gi|407385687|gb|AFU16188.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis MC28]
Length = 207
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ ++ +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVDDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|258513563|ref|YP_003189785.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
gi|257777268|gb|ACV61162.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
Length = 196
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF +ID AE G+ + ++ GQG++G V+LAKP
Sbjct: 3 LIVGLGNPGIEYRNTRHN-IGFMVIDQLAEKYGVDVQKKMMRSVLGQGWLGSQKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSG+S L +YKL +LV DD+ L G LRLR G GGHNGLKS++
Sbjct: 62 LTYMNLSGQSVQALMNWYKLTAQELLVICDDLNLEAGHLRLRKKGSDGGHNGLKSIIQAL 121
Query: 140 RGNREFARLRIGIGRP--PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F RLR+GIGRP PGQ + +F+L KF E + + G + + + G+
Sbjct: 122 -GTSDFPRLRLGIGRPSHPGQ-EQVSFVLGKFAPQEAELLSQLIGRGEQAAAVWVENGID 179
Query: 198 ESARHFN 204
+ FN
Sbjct: 180 AAMNEFN 186
>gi|187777478|ref|ZP_02993951.1| hypothetical protein CLOSPO_01046 [Clostridium sporogenes ATCC
15579]
gi|187774406|gb|EDU38208.1| aminoacyl-tRNA hydrolase [Clostridium sporogenes ATCC 15579]
Length = 189
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 117/189 (61%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G++YK TRHN +GF+ ID AE I +N K ++G+G +G+ V+L K
Sbjct: 2 YLVVGLGNIGEEYKKTRHN-IGFDAIDIIAEEYNIEINRQKFKGSYGEGRIGNEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKINKENIIVIYDDMSIDIGKLRIRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P G + ++L KF+ RE I+ L V+ ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDGNV--VNYVLGKFSKEQREIIEKTLAMSVKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|399046082|ref|ZP_10738619.1| peptidyl-tRNA hydrolase [Brevibacillus sp. CF112]
gi|398055867|gb|EJL47917.1| peptidyl-tRNA hydrolase [Brevibacillus sp. CF112]
Length = 191
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G V VLL KP
Sbjct: 5 VIIGLGNPGKKYEDTRHN-AGFMAIDKISDKWGIPVAQNKFRALVGEGRVEGEKVLLVKP 63
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGES + +YKL + ++V DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 64 QTYMNLSGESVAEVLKFYKLTPDELVVIFDDLDLPTGQLRLREKGSAGGHNGIKSMIQHL 123
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+++GIGRP ++LQ F A R +I A+ + + + +
Sbjct: 124 -GTQEFKRIKVGIGRPEPGRSVSDYVLQSFPAAERPQIQEAVGHAADAAAMWTREPFIKV 182
Query: 200 ARHFNTIQK 208
HFN++QK
Sbjct: 183 MNHFNSLQK 191
>gi|433543189|ref|ZP_20499601.1| peptidyl-tRNA hydrolase [Brevibacillus agri BAB-2500]
gi|432185548|gb|ELK43037.1| peptidyl-tRNA hydrolase [Brevibacillus agri BAB-2500]
Length = 189
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G V VLL KP
Sbjct: 3 VIIGLGNPGKKYEDTRHN-AGFMAIDKISDKWGIPVAQNKFRALVGEGRVEGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGES + +YKL + ++V DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 QTYMNLSGESVAEVLKFYKLTPDELVVIFDDLDLPTGQLRLREKGSAGGHNGIKSMIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+++GIGRP ++LQ F A R +I A+ + + + +
Sbjct: 122 -GTQEFKRIKVGIGRPEPGRSVSDYVLQSFPAAERPQIQEAVGHAADAAAMWTREPFIKV 180
Query: 200 ARHFNTIQK 208
HFN++QK
Sbjct: 181 MNHFNSLQK 189
>gi|228956493|ref|ZP_04118290.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423632849|ref|ZP_17608594.1| peptidyl-tRNA hydrolase [Bacillus cereus VD154]
gi|228803183|gb|EEM50004.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401258893|gb|EJR65074.1| peptidyl-tRNA hydrolase [Bacillus cereus VD154]
Length = 207
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEITDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|423613678|ref|ZP_17589538.1| peptidyl-tRNA hydrolase [Bacillus cereus VD107]
gi|401241367|gb|EJR47758.1| peptidyl-tRNA hydrolase [Bacillus cereus VD107]
Length = 207
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEISGVNQSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|365164150|ref|ZP_09360235.1| peptidyl-tRNA hydrolase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410723|ref|ZP_17387843.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3O-2]
gi|423433493|ref|ZP_17410497.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4O-1]
gi|363613165|gb|EHL64687.1| peptidyl-tRNA hydrolase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401109954|gb|EJQ17871.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3O-2]
gi|401111556|gb|EJQ19445.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4O-1]
Length = 207
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIADVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|300087756|ref|YP_003758278.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527489|gb|ADJ25957.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 188
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 113/188 (60%), Gaps = 5/188 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG +Y TRHN +GFE++ FA IS N C++ G+G +GD PV+LAKP
Sbjct: 3 LIIGLGNPGKEYHHTRHN-IGFEILGRFARFHNISFNKRSCQSRIGEGKIGDQPVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L YK+ ++V HDD+ LP G +R+R GG GGHNG+KS++ +
Sbjct: 62 QTYMNLSGQAVAALIKRYKVTPKDIIVIHDDLDLPIGKIRIRLEGGAGGHNGIKSIIQSI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G F R+++GIGRP D +L +F+ E I+ + + + L+ ++S
Sbjct: 122 -GTICFTRIKVGIGRPTTTGDRIEIVDHVLTQFSQDEAEMINKTVIDALGALETMISGDY 180
Query: 197 TESARHFN 204
+ FN
Sbjct: 181 NAAMNKFN 188
>gi|433460548|ref|ZP_20418177.1| peptidyl-tRNA hydrolase [Halobacillus sp. BAB-2008]
gi|432191390|gb|ELK48348.1| peptidyl-tRNA hydrolase [Halobacillus sp. BAB-2008]
Length = 187
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY+ TRHN +GF ++D AE G ++ F V V+L KPQ
Sbjct: 4 IVGLGNPGRKYEQTRHN-IGFMIVDQLAEKNGWTLTQKKFNGLFTMERVDGEKVVLLKPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGES PL YY + + VLV +DD+ LP G +RLR GGHGGHNG++++++
Sbjct: 63 TYMNLSGESLRPLMEYYDMDVEDVLVVYDDLDLPPGKIRLRQKGGHGGHNGIRNIIDQL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +EF RLR+G+GRP G +L F + ++ ++++ V+ + L++ E
Sbjct: 122 GTKEFKRLRVGVGRPNGSQTVIDHVLGDFYKEEWKAVEESIEQSVQACEAWLNQPFNEVM 181
Query: 201 RHFNT 205
+N
Sbjct: 182 NDYNV 186
>gi|311028984|ref|ZP_07707074.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
gi|311032272|ref|ZP_07710362.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
Length = 186
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+FVGLGNPG +Y+ TRHN +GF +ID A+ I + K FGQG + VLL KP
Sbjct: 3 VFVGLGNPGRQYEETRHN-IGFMVIDELADKWNIPLTQSKFKGIFGQGTINGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL +YKL + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECVRPLLDFYKLDVEDLVVIYDDLDLPAGKLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ + F R+R+GI RP ++L KF R ID ++++ E + LSK +
Sbjct: 122 Q-TQNFNRIRMGIDRPKNGPSISDYVLGKFQTEERPAIDDSIKKAAEACEENLSKEFLQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNTFN 185
>gi|423513015|ref|ZP_17489545.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-1]
gi|402446363|gb|EJV78223.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA2-1]
Length = 207
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP + ++L +F A ++ +++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGIKVVDYVLGRFTAEEISGVNQSIENAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|423438932|ref|ZP_17415913.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X12-1]
gi|401115420|gb|EJQ23272.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG4X12-1]
Length = 207
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
+R L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+
Sbjct: 20 SRMKLIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVI 78
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS
Sbjct: 79 LLKPLTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKST 138
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+++ G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 139 ISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKP 197
Query: 196 LTESARHFNT 205
+ FN+
Sbjct: 198 FLQIMNTFNS 207
>gi|229083370|ref|ZP_04215721.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
gi|228699935|gb|EEL52569.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
Length = 186
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ GIS+N K +G GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMGIDELAKRWGISLNEQKFKGMYGSGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+G+ RP M ++L +F A ++ ++++ + + L K +
Sbjct: 122 -GTQEFQRIRMGVDRPKNGMKVVDYVLGRFTAEELPEVNASIEKAADACEEWLKKPFLQI 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNTFN 185
>gi|423618766|ref|ZP_17594599.1| peptidyl-tRNA hydrolase [Bacillus cereus VD115]
gi|401252608|gb|EJR58864.1| peptidyl-tRNA hydrolase [Bacillus cereus VD115]
Length = 207
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ ++ +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVDDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEGWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|218895187|ref|YP_002443598.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228963151|ref|ZP_04124321.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|423364614|ref|ZP_17342083.1| peptidyl-tRNA hydrolase [Bacillus cereus VD022]
gi|423565591|ref|ZP_17541866.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A1]
gi|218543107|gb|ACK95501.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228796536|gb|EEM43974.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401072726|gb|EJP81188.1| peptidyl-tRNA hydrolase [Bacillus cereus VD022]
gi|401193668|gb|EJR00672.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A1]
Length = 207
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS++++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSMISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|301051787|ref|YP_003789998.1| peptidyl-tRNA hydrolase [Bacillus cereus biovar anthracis str. CI]
gi|300373956|gb|ADK02860.1| peptidyl-tRNA hydrolase [Bacillus cereus biovar anthracis str. CI]
Length = 207
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSKEIPDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|229015454|ref|ZP_04172455.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
gi|229021659|ref|ZP_04178246.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228739662|gb|EEL90071.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228745838|gb|EEL95839.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
Length = 190
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 114/191 (59%), Gaps = 2/191 (1%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 74
V R L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V
Sbjct: 2 VQRMKLIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKV 60
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+L KP TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS
Sbjct: 61 ILLKPLTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKS 120
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+++ G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 121 TISHL-GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEELPGVNQSIEKTADACEEWLNK 179
Query: 195 GLTESARHFNT 205
+ FN+
Sbjct: 180 PFLQIMNTFNS 190
>gi|229159225|ref|ZP_04287250.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
gi|228624240|gb|EEK81041.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
Length = 186
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLARFTSEEIPDVNHSIEKAADACEEWLKKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|239629011|ref|ZP_04672042.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239519157|gb|EEQ59023.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 216
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+ TRHN VGFE+ID A+ G ++ K +G+G +G VLL K
Sbjct: 29 YIVAGLGNPTREYEKTRHN-VGFEVIDVLADMLGTTVEEKKFKGCYGRGIIGGEKVLLLK 87
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES A +YK+ +++ +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 88 PQTFMNLSGESIRAAADFYKVDPEHIIIIYDDISLDVGQLRIRKKGSAGGHNGIKNIIAH 147
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+++G+G P +MD ++L +F+ R ++ A + + ++++++ G+
Sbjct: 148 L-GTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAAMEDAFKTAAKAVEVMITDGMDT 206
Query: 199 SARHFN 204
+ FN
Sbjct: 207 AMNQFN 212
>gi|376263010|ref|YP_005149730.1| peptidyl-tRNA hydrolase [Clostridium sp. BNL1100]
gi|373947004|gb|AEY67925.1| peptidyl-tRNA hydrolase [Clostridium sp. BNL1100]
Length = 189
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG K++ TRHN VGF+ ID + I ++ + KA +G+G + +L K
Sbjct: 5 YLLVGLGNPGTKFENTRHN-VGFDTIDYISAKYNIKLSKIGFKAVYGEGEIEGVRTILVK 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YKLP+ R+ V +DD+ L G +R+R G G HNG+KS++
Sbjct: 64 PQTFMNLSGESVREIVDWYKLPIERLTVIYDDIDLEPGKIRVRPKGSSGTHNGMKSIIYQ 123
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +R F R+RIGIGR P + D ++L KF+ R+ ID ++++ + ++ G +
Sbjct: 124 LQDDR-FPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSVEKAAQAAIMIAQSGPEK 182
Query: 199 SARHFN 204
+ +FN
Sbjct: 183 AMNNFN 188
>gi|423399540|ref|ZP_17376736.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-1]
gi|423410232|ref|ZP_17387379.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-3]
gi|401643596|gb|EJS61292.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-1]
gi|401649041|gb|EJS66631.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-3]
Length = 207
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|452972534|gb|EME72364.1| peptidyl-tRNA hydrolase [Bacillus sonorensis L12]
Length = 188
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+F GLGNPG Y+ TRHN VGF ID ++ I+++ +G GFV VLL KP
Sbjct: 3 VFAGLGNPGKTYEKTRHN-VGFMTIDELSKEWNIALDKTKFNGQYGIGFVSGRKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY++P+ + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLLDYYEIPIENLKVIYDDLDLPAGKIRLRVKGSAGGHNGIKSMIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRP M ++L F A I A+Q+ V+ + L K E
Sbjct: 122 -GTSDFHRIRIGIGRPVNGMKIVDYVLGAFTADEEPAIQEAVQKTVKACEASLEKPFLEV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNEFNA 186
>gi|373119607|ref|ZP_09533701.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 7_1_58FAA]
gi|371662163|gb|EHO27372.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 7_1_58FAA]
Length = 198
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG+KY+ TRHN VGF +D AE + + + +A VG VLL K
Sbjct: 13 WLVVGLGNPGEKYENTRHN-VGFLTVDELAERARVPVQKLKHRALTNTLEVGGVKVLLMK 71
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ G A +YKLP RVLV DD+ LP G LR+R G GGHNGLKS++ +
Sbjct: 72 PVTYMNLSGEAVGEAARFYKLPPERVLVISDDVSLPVGKLRIRKGGSAGGHNGLKSIIQH 131
Query: 139 FRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F R+++G+G+ P D ++L KF + I A+++ + ++ L+ +G
Sbjct: 132 L-GTDQFPRIKVGVGQKPHPDYDMADWVLSKFAGEDLKTITEAIRKAADAVECLIQEGPD 190
Query: 198 ESARHFN 204
++ FN
Sbjct: 191 KAMNRFN 197
>gi|218232965|ref|YP_002364901.1| peptidyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228898805|ref|ZP_04063088.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|228905848|ref|ZP_04069746.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228919002|ref|ZP_04082382.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228950600|ref|ZP_04112735.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229039957|ref|ZP_04189721.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|229067816|ref|ZP_04201134.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|229077330|ref|ZP_04210007.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|229107738|ref|ZP_04237375.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|229125569|ref|ZP_04254602.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|229142857|ref|ZP_04271300.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|229148461|ref|ZP_04276718.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|229176652|ref|ZP_04304057.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|229188337|ref|ZP_04315386.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|296500884|ref|YP_003662584.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
gi|423427604|ref|ZP_17404635.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-2]
gi|423506593|ref|ZP_17483182.1| peptidyl-tRNA hydrolase [Bacillus cereus HD73]
gi|423583701|ref|ZP_17559812.1| peptidyl-tRNA hydrolase [Bacillus cereus VD014]
gi|423589350|ref|ZP_17565436.1| peptidyl-tRNA hydrolase [Bacillus cereus VD045]
gi|423633618|ref|ZP_17609271.1| peptidyl-tRNA hydrolase [Bacillus cereus VD156]
gi|423644688|ref|ZP_17620305.1| peptidyl-tRNA hydrolase [Bacillus cereus VD166]
gi|423658446|ref|ZP_17633745.1| peptidyl-tRNA hydrolase [Bacillus cereus VD200]
gi|449086717|ref|YP_007419158.1| SpoVC [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|218160922|gb|ACK60914.1| aminoacyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228595136|gb|EEK52906.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|228606819|gb|EEK64235.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|228635003|gb|EEK91575.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|228640620|gb|EEK97007.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|228657886|gb|EEL13691.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|228675711|gb|EEL30918.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|228705986|gb|EEL58297.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|228715300|gb|EEL67158.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|228727365|gb|EEL78558.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|228809075|gb|EEM55559.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228840651|gb|EEM85912.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228853788|gb|EEM98547.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228860830|gb|EEN05207.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|296321936|gb|ADH04864.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
gi|401107999|gb|EJQ15935.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-2]
gi|401208333|gb|EJR15100.1| peptidyl-tRNA hydrolase [Bacillus cereus VD014]
gi|401224003|gb|EJR30563.1| peptidyl-tRNA hydrolase [Bacillus cereus VD045]
gi|401269472|gb|EJR75502.1| peptidyl-tRNA hydrolase [Bacillus cereus VD166]
gi|401283328|gb|EJR89223.1| peptidyl-tRNA hydrolase [Bacillus cereus VD156]
gi|401287779|gb|EJR93550.1| peptidyl-tRNA hydrolase [Bacillus cereus VD200]
gi|402447418|gb|EJV79270.1| peptidyl-tRNA hydrolase [Bacillus cereus HD73]
gi|449020474|gb|AGE75637.1| SpoVC [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 207
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|30018322|ref|NP_829953.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|75759613|ref|ZP_00739699.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|29893862|gb|AAP07154.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|74492904|gb|EAO56034.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 210
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 27 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 85
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 86 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 145
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 146 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 204
Query: 200 ARHFNT 205
FN+
Sbjct: 205 MNTFNS 210
>gi|206977947|ref|ZP_03238834.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217957627|ref|YP_002336169.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218901253|ref|YP_002449087.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228912791|ref|ZP_04076439.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228925305|ref|ZP_04088402.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931554|ref|ZP_04094461.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983307|ref|ZP_04143521.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229119714|ref|ZP_04248976.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|229153830|ref|ZP_04281961.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|229194442|ref|ZP_04321246.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|384177957|ref|YP_005563719.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|423357805|ref|ZP_17335397.1| peptidyl-tRNA hydrolase [Bacillus cereus IS075]
gi|423554015|ref|ZP_17530341.1| peptidyl-tRNA hydrolase [Bacillus cereus ISP3191]
gi|423572002|ref|ZP_17548218.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A12]
gi|423572806|ref|ZP_17548925.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-D12]
gi|423608124|ref|ZP_17584016.1| peptidyl-tRNA hydrolase [Bacillus cereus VD102]
gi|206743853|gb|EDZ55273.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217064082|gb|ACJ78332.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218535325|gb|ACK87723.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228589032|gb|EEK47046.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|228629634|gb|EEK86330.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|228663739|gb|EEL19317.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|228776421|gb|EEM24773.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828106|gb|EEM73833.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834352|gb|EEM79892.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846851|gb|EEM91855.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|324324041|gb|ADY19301.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401073986|gb|EJP82394.1| peptidyl-tRNA hydrolase [Bacillus cereus IS075]
gi|401182096|gb|EJQ89238.1| peptidyl-tRNA hydrolase [Bacillus cereus ISP3191]
gi|401199136|gb|EJR06046.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-A12]
gi|401216730|gb|EJR23436.1| peptidyl-tRNA hydrolase [Bacillus cereus MSX-D12]
gi|401238621|gb|EJR45057.1| peptidyl-tRNA hydrolase [Bacillus cereus VD102]
Length = 207
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|423520644|ref|ZP_17497117.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA4-10]
gi|401180540|gb|EJQ87698.1| peptidyl-tRNA hydrolase [Bacillus cereus HuA4-10]
Length = 186
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ +++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|392946237|ref|ZP_10311879.1| peptidyl-tRNA hydrolase [Frankia sp. QA3]
gi|392289531|gb|EIV95555.1| peptidyl-tRNA hydrolase [Frankia sp. QA3]
Length = 197
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 113/189 (59%), Gaps = 2/189 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG Y G RHN GF ++D AE G + + +A + + +LA
Sbjct: 10 PWLVVGLGNPGPGYAGNRHN-AGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGERAVLA 68
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P ++MNLSG + +YK+ RV+V HD++ +P G +RL+ GG GHNGL+S+ +
Sbjct: 69 RPLSFMNLSGGPVSAVRTFYKIDPARVIVVHDELDIPFGAVRLKRGGGDNGHNGLRSISS 128
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG++DP F+L+ F R + L+ + +++L++ GL
Sbjct: 129 AL-GTRDYLRVRVGIGRPPGRLDPADFVLRDFGTAERRELPLLLEHAADSVEMLITDGLE 187
Query: 198 ESARHFNTI 206
+ ++ +
Sbjct: 188 PTQNRYHAL 196
>gi|402562857|ref|YP_006605581.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-771]
gi|401791509|gb|AFQ17548.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-771]
Length = 186
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS++++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSMISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|332981375|ref|YP_004462816.1| peptidyl-tRNA hydrolase [Mahella australiensis 50-1 BON]
gi|332699053|gb|AEE95994.1| peptidyl-tRNA hydrolase [Mahella australiensis 50-1 BON]
Length = 188
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPGD+YK TRHN VGF +ID A+ GI +N + KA +G+ ++G V+LAK
Sbjct: 2 YIIVGLGNPGDRYKYTRHN-VGFMVIDILAQRNGIKLNKLDYKALWGEAWIGAEKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGES + Y+K PL ++V +DD+ LP G +R+R G G HNG++S++
Sbjct: 61 PQTFMNASGESVYDIVRYFKPPLEHLIVIYDDIDLPLGRIRIRTKGSAGTHNGMRSIIYM 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GI RP MD ++L F+ + I A++ + + ++ G+
Sbjct: 121 LDSD-AFPRIRVGIDRPGPGMDLVNYVLSGFDEQEQPIIYKAMERAADAAEAIVKDGIEI 179
Query: 199 SARHFN 204
+ +N
Sbjct: 180 AMSKYN 185
>gi|220932953|ref|YP_002509861.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
gi|219994263|gb|ACL70866.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
Length = 187
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 3/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGI-SMNTVHCKATFGQGFVGDAPVLLA 77
+L VGLGNPGDKY TRHN +GF++I+ A I + N +A G+G + V+LA
Sbjct: 2 YLVVGLGNPGDKYAETRHN-IGFQVIERLARKHKIKAKNYPKFEALCGRGMIRGQKVMLA 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P TYMN SG + + YY L+ +++ +DD+ LP G +R+R G GGHNG+KS++N
Sbjct: 61 QPLTYMNNSGRAVRKIIDYYDFSLDNIIIIYDDLDLPPGKIRIRKKGSSGGHNGVKSIIN 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
REF R+RIGIGRPP ++ ++L F++ E + L VE ++ +L KGL
Sbjct: 121 CL-DTREFPRIRIGIGRPPAGVNVVDYVLGYFSSEDSEVMSDVLDTTVEAVETILEKGLE 179
Query: 198 ESARHFNT 205
++ FN+
Sbjct: 180 QAMNIFNS 187
>gi|423597225|ref|ZP_17573225.1| peptidyl-tRNA hydrolase [Bacillus cereus VD078]
gi|401239566|gb|EJR45991.1| peptidyl-tRNA hydrolase [Bacillus cereus VD078]
Length = 207
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP + ++L +F + ++ +++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFIQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|126653273|ref|ZP_01725384.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
gi|126589947|gb|EAZ84076.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
Length = 186
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG Y+ TRHN +GF++IDA AE G + + + VLL KP
Sbjct: 3 IIVGLGNPGKPYEHTRHN-IGFDVIDALAEKWGAPLTNSKFNGMYTTVHRPEGKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE GPL Y+ + + ++V +DD+ L G LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECVGPLMDYFDIDVEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RPP M ++L KF+ + + A+++ V +++ LSK +
Sbjct: 122 -GTQEFNRIRVGISRPPAGMKVADYVLAKFSKEDQVYMKEAIEKSVNAVEVSLSKPFLDV 180
Query: 200 ARHFN 204
HFN
Sbjct: 181 MNHFN 185
>gi|118475822|ref|YP_892973.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
gi|254682322|ref|ZP_05146183.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CNEVA-9066]
gi|254735453|ref|ZP_05193161.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Western North
America USA6153]
gi|254744645|ref|ZP_05202324.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Kruger B]
gi|254756350|ref|ZP_05208379.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Vollum]
gi|254762406|ref|ZP_05214248.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Australia 94]
gi|118415047|gb|ABK83466.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
Length = 210
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 27 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 85
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 86 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 145
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 146 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 204
Query: 200 ARHFNT 205
FN+
Sbjct: 205 MNTFNS 210
>gi|47569900|ref|ZP_00240567.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|52145164|ref|YP_081663.1| peptidyl-tRNA hydrolase [Bacillus cereus E33L]
gi|222093821|ref|YP_002527870.1| peptidyl-tRNA hydrolase [Bacillus cereus Q1]
gi|375282148|ref|YP_005102581.1| peptidyl-tRNA hydrolase [Bacillus cereus NC7401]
gi|402554362|ref|YP_006595633.1| peptidyl-tRNA hydrolase [Bacillus cereus FRI-35]
gi|68052912|sp|Q63HI2.1|PTH_BACCZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783851|sp|B9IZD4.1|PTH_BACCQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|47553434|gb|EAL11818.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|51978633|gb|AAU20183.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus E33L]
gi|221237868|gb|ACM10578.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus Q1]
gi|358350669|dbj|BAL15841.1| peptidyl-tRNA hydrolase [Bacillus cereus NC7401]
gi|401795572|gb|AFQ09431.1| peptidyl-tRNA hydrolase [Bacillus cereus FRI-35]
Length = 186
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|229170902|ref|ZP_04298505.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
gi|423399629|ref|ZP_17376802.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-2]
gi|423461686|ref|ZP_17438482.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X2-1]
gi|423480173|ref|ZP_17456885.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-1]
gi|228612568|gb|EEK69787.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
gi|401135348|gb|EJQ42947.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG5X2-1]
gi|401658235|gb|EJS75732.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG2X1-2]
gi|402423676|gb|EJV55882.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG6X1-1]
Length = 207
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGIFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + + ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVSHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|65317511|ref|ZP_00390470.1| COG0193: Peptidyl-tRNA hydrolase [Bacillus anthracis str. A2012]
gi|165872550|ref|ZP_02217182.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167635053|ref|ZP_02393370.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|167641506|ref|ZP_02399754.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|170688886|ref|ZP_02880088.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|170707529|ref|ZP_02897982.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|177655322|ref|ZP_02936851.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190568956|ref|ZP_03021857.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Tsiankovskii-I]
gi|196036361|ref|ZP_03103758.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196041774|ref|ZP_03109064.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|196047390|ref|ZP_03114603.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|225862104|ref|YP_002747482.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227812725|ref|YP_002812734.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228943858|ref|ZP_04106244.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229089183|ref|ZP_04220465.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|229182446|ref|ZP_04309698.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|229602955|ref|YP_002864703.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|254724192|ref|ZP_05185977.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A1055]
gi|300119146|ref|ZP_07056847.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
gi|376264079|ref|YP_005116791.1| Peptidyl-tRNA hydrolase [Bacillus cereus F837/76]
gi|386733919|ref|YP_006207100.1| Peptidyl-tRNA hydrolase [Bacillus anthracis str. H9401]
gi|164711678|gb|EDR17223.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167510491|gb|EDR85889.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|167529527|gb|EDR92277.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|170127525|gb|EDS96399.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|170667110|gb|EDT17871.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|172080163|gb|EDT65256.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190559880|gb|EDV13864.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Tsiankovskii-I]
gi|195990991|gb|EDX54962.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196021792|gb|EDX60486.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|196027394|gb|EDX66011.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|225790416|gb|ACO30633.1| aminoacyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227002837|gb|ACP12580.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228601026|gb|EEK58594.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|228694146|gb|EEL47827.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|228815815|gb|EEM62050.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229267363|gb|ACQ49000.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|298723468|gb|EFI64209.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
gi|364509879|gb|AEW53278.1| Peptidyl-tRNA hydrolase [Bacillus cereus F837/76]
gi|384383771|gb|AFH81432.1| Peptidyl-tRNA hydrolase [Bacillus anthracis str. H9401]
Length = 207
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|331086146|ref|ZP_08335228.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406305|gb|EGG85819.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 192
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ +GLGNP +Y+GTRHN VGF++ID E I+++T KA G+G + VLL K
Sbjct: 2 YIIIGLGNPTAQYEGTRHN-VGFDVIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYK+ VLV +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESVRELVEYYKVDAEEEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G + F R+++G+G P D ++L F+ R +++ E ++L+L+ +
Sbjct: 121 HL-GTQVFPRIKVGVGEKPKNYDLADYVLGHFSKAERAQMEDGYDRATEAVRLILAGEID 179
Query: 198 ESARHFNTIQ 207
+ +N Q
Sbjct: 180 AAMNQYNKKQ 189
>gi|434378694|ref|YP_006613338.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-789]
gi|38372414|sp|Q81J96.2|PTH_BACCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|401877251|gb|AFQ29418.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis HD-789]
Length = 186
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|125975113|ref|YP_001039023.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
gi|125715338|gb|ABN53830.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
Length = 196
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN VGF+ ++ ++ I + + KA G G +G V+LAK
Sbjct: 12 FVIVGLGNPGAKYENTRHN-VGFDTVEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAK 70
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YK+P+ +++ +DD+ LP G LRLR G G HNG++SV+
Sbjct: 71 PQTFMNLSGESVREIVEWYKIPVKNIIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIYQ 130
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ + EF R+RIGI +PP D +++L +F+A R++ID A+++ + ++ +L G+
Sbjct: 131 LQ-SEEFPRIRIGIDKPPEGWDLISYVLSRFSADERKKIDEAVEKAADAVETILKSGIDS 189
Query: 199 SARHFN 204
+ +N
Sbjct: 190 AMNKYN 195
>gi|323691737|ref|ZP_08105997.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
gi|323504215|gb|EGB20017.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
Length = 202
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y G+RHN VGF +D A+ I + KA G+G + V+L K
Sbjct: 2 YIIAGLGNPGKEYAGSRHN-VGFMTLDELADRYNIDVREKAHKALIGKGMIEGNKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES + YYK + +V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 PQTYMNLSGESIRSVMDYYKTEPSEFIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+RIG+G P +MD ++L F+ +ER++ A ++GV +++ G+
Sbjct: 121 L-GTQEFPRIRIGVGEKPARMDLADYVLGHFSKEEKERMEQAFKDGVAAAVAMMNDGVDT 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 AMNRFN 185
>gi|42779130|ref|NP_976377.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
gi|42735045|gb|AAS38985.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
Length = 210
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 27 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 85
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 86 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 145
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 146 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQI 204
Query: 200 ARHFNT 205
FN+
Sbjct: 205 MNTFNS 210
>gi|291540814|emb|CBL13925.1| peptidyl-tRNA hydrolase [Roseburia intestinalis XB6B4]
Length = 212
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF+++DA AE IS++ KA G+G + V+LAKP
Sbjct: 23 LIVGLGNPGKQYEHTRHN-IGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKP 81
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
QTYMNLSGES L YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 82 QTYMNLSGESVAELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNII-A 140
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+++G+G P D +L F+ R ++ A+ VE +++++ G T+
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDTADRAEVEKAIGHAVEAAEMMIT-GETD 199
Query: 199 SARHFNTIQK 208
+A + ++K
Sbjct: 200 AAMNRYNVKK 209
>gi|229009561|ref|ZP_04166788.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
gi|229053898|ref|ZP_04195333.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|229165040|ref|ZP_04292836.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|423490666|ref|ZP_17467348.1| peptidyl-tRNA hydrolase [Bacillus cereus BtB2-4]
gi|423496406|ref|ZP_17473050.1| peptidyl-tRNA hydrolase [Bacillus cereus CER057]
gi|423496800|ref|ZP_17473417.1| peptidyl-tRNA hydrolase [Bacillus cereus CER074]
gi|423595306|ref|ZP_17571336.1| peptidyl-tRNA hydrolase [Bacillus cereus VD048]
gi|423659630|ref|ZP_17634799.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM022]
gi|423671082|ref|ZP_17646111.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM034]
gi|423672695|ref|ZP_17647634.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM062]
gi|228618425|gb|EEK75454.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|228721439|gb|EEL72959.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|228751705|gb|EEM01504.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
gi|401149136|gb|EJQ56615.1| peptidyl-tRNA hydrolase [Bacillus cereus CER057]
gi|401163981|gb|EJQ71321.1| peptidyl-tRNA hydrolase [Bacillus cereus CER074]
gi|401222232|gb|EJR28829.1| peptidyl-tRNA hydrolase [Bacillus cereus VD048]
gi|401293913|gb|EJR99546.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM034]
gi|401304649|gb|EJS10199.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM022]
gi|401311427|gb|EJS16728.1| peptidyl-tRNA hydrolase [Bacillus cereus VDM062]
gi|402429011|gb|EJV61102.1| peptidyl-tRNA hydrolase [Bacillus cereus BtB2-4]
Length = 207
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP + ++L +F + ++ +++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|30260242|ref|NP_842619.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47525304|ref|YP_016653.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183085|ref|YP_026337.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49481760|ref|YP_034404.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|421510668|ref|ZP_15957557.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. UR-1]
gi|421640741|ref|ZP_16081319.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. BF1]
gi|38372419|sp|Q81VY9.1|PTH_BACAN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052958|sp|Q6HPW6.1|PTH_BACHK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|30253563|gb|AAP24105.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47500452|gb|AAT29128.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177012|gb|AAT52388.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49333316|gb|AAT63962.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|401819289|gb|EJT18470.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. UR-1]
gi|403392120|gb|EJY89378.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. BF1]
Length = 186
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|423374895|ref|ZP_17352232.1| peptidyl-tRNA hydrolase [Bacillus cereus AND1407]
gi|401093377|gb|EJQ01478.1| peptidyl-tRNA hydrolase [Bacillus cereus AND1407]
Length = 207
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLHI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|256003232|ref|ZP_05428224.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281418468|ref|ZP_06249487.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|385777599|ref|YP_005686764.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 1313]
gi|419722854|ref|ZP_14249991.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum AD2]
gi|419726354|ref|ZP_14253377.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum YS]
gi|255992923|gb|EEU03013.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281407552|gb|EFB37811.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|316939279|gb|ADU73313.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 1313]
gi|380770406|gb|EIC04303.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum YS]
gi|380781234|gb|EIC10895.1| Peptidyl-tRNA hydrolase [Clostridium thermocellum AD2]
Length = 189
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN VGF+ ++ ++ I + + KA G G +G V+LAK
Sbjct: 5 FVIVGLGNPGAKYENTRHN-VGFDTVEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAK 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YK+P+ +++ +DD+ LP G LRLR G G HNG++SV+
Sbjct: 64 PQTFMNLSGESVREIVEWYKIPVKNIIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIYQ 123
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ + EF R+RIGI +PP D +++L +F+A R++ID A+++ + ++ +L G+
Sbjct: 124 LQ-SEEFPRIRIGIDKPPEGWDLISYVLSRFSADERKKIDEAVEKAADAVETILKSGIDS 182
Query: 199 SARHFN 204
+ +N
Sbjct: 183 AMNKYN 188
>gi|423370760|ref|ZP_17348164.1| peptidyl-tRNA hydrolase [Bacillus cereus VD142]
gi|401073347|gb|EJP81772.1| peptidyl-tRNA hydrolase [Bacillus cereus VD142]
Length = 207
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGRLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP + ++L +F + ++ +++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|78043715|ref|YP_359068.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
gi|85681884|sp|Q9F8Q3.2|PTH_CARHZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77995830|gb|ABB14729.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
Length = 187
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+ TRHN GF ++D A+ GI + K+ G+G + VLL K
Sbjct: 2 FIIAGLGNPGQEYENTRHN-AGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSG + ++YKLPL+R++V +DD+ LP G +RLR G GGH G+ S+++
Sbjct: 61 PQTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ E RL+IGIGR P D K ++LQ F RE ++ L+ E + + L++G +
Sbjct: 121 L-GSEEIPRLKIGIGR-PAVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNK 178
Query: 199 SARHFN 204
+ FN
Sbjct: 179 AMTDFN 184
>gi|255524038|ref|ZP_05391000.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296186895|ref|ZP_06855296.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|255512325|gb|EET88603.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296048609|gb|EFG88042.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
Length = 187
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 117/189 (61%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +Y+ TRHN VGF++ID ++ IS+N K +G+G + V+L K
Sbjct: 2 FLIVGLGNIGKQYEHTRHN-VGFDIIDLVSDKYNISINREKFKGMYGEGSIASEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +YK+ +V+V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PSTYMNLSGESIREVVNFYKISNEQVIVLYDDISLEVGRLRIREKGSAGGHNGIKSIIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R+++G+G+P ++ + +L +FN RE++ A V+ ++ ++ G+ E
Sbjct: 121 L-GTDVFPRIKVGVGQPKSEL--VSHVLGRFNVEDREKVIKAFDVSVDAVEHIIKYGVDE 177
Query: 199 SARHFNTIQ 207
+ FN+ +
Sbjct: 178 AMNKFNSFK 186
>gi|220930454|ref|YP_002507363.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
gi|220000782|gb|ACL77383.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
Length = 189
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+LFVGLGNPG K++ TRHN VGF+ ID + I ++ + KA +G+G + +L K
Sbjct: 5 YLFVGLGNPGTKFENTRHN-VGFDTIDYISVKYNIKLSKIGFKALYGEGSIEGIRTILVK 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YKLPL R++V +DD+ L G +R+R G G HNG+KS++
Sbjct: 64 PQTFMNLSGESVREIVDWYKLPLERLIVIYDDIDLEPGKMRVRPKGSSGTHNGMKSIIYQ 123
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL 181
+ + F R+RIGIGR P + D ++L KF+ R+ ID ++
Sbjct: 124 LQDD-SFPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSI 165
>gi|228989259|ref|ZP_04149252.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
gi|229003057|ref|ZP_04160914.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228758215|gb|EEM07403.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228770469|gb|EEM19040.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
Length = 186
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ GIS++ K +G GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMGIDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F A ++ ++++ + + L K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEELPEVNQSIEKAADACEEWLKKPFLQI 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNTFN 185
>gi|426404603|ref|YP_007023574.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861271|gb|AFY02307.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 187
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 114/188 (60%), Gaps = 3/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +YK TRHN +GF +D E G KA QG + D PV+ K
Sbjct: 2 WLIVGLGNPGGEYKLTRHN-IGFMAVDYLMEGLGNPPIKNQFKAEIAQGKIKDHPVIFCK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES PL +YK+PL R++V HD++ P ++++ N GHGGHNG+KSV +
Sbjct: 61 PQTFMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSV-SG 119
Query: 139 FRGNREFARLRIGIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G+ ++ RLR+G+GRP P ++L KF ++ L + + ++ ++ G+
Sbjct: 120 LMGSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQ 179
Query: 198 ESARHFNT 205
+++ FNT
Sbjct: 180 KASTKFNT 187
>gi|440785115|ref|ZP_20962065.1| peptidyl-tRNA hydrolase [Clostridium pasteurianum DSM 525]
gi|440218487|gb|ELP57707.1| peptidyl-tRNA hydrolase [Clostridium pasteurianum DSM 525]
Length = 187
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 117/189 (61%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN VGF+++D + I MN + K +G+G + + V+ K
Sbjct: 2 YLIVGLGNPGKEYENTRHN-VGFDVLDLLCDKYNIDMNRIKFKGMYGEGKIENEKVIFLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSGES + A+YK+P ++V +DD+ L G +R+R +G GGHNG+K+++ N
Sbjct: 61 PMTFMNLSGESVKEVCAFYKIPNKNIIVIYDDISLDIGRMRIRKSGSAGGHNGIKNIIFN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F+R++IG+G P G D + +L KF+ R ++ V+ + +++ G+ E
Sbjct: 121 LSTDI-FSRIKIGVGEPKG--DLVSHVLGKFSEDDRLEVEKVFNAAVKAINCIITDGVYE 177
Query: 199 SARHFNTIQ 207
+ FN ++
Sbjct: 178 AMNSFNGLK 186
>gi|206972605|ref|ZP_03233548.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
gi|206732507|gb|EDZ49686.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
Length = 207
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS + +
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTILHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIADVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|229027898|ref|ZP_04184053.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
gi|228733412|gb|EEL84239.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
Length = 207
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + + ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVGHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|212637895|ref|YP_002314415.1| peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
gi|212559375|gb|ACJ32430.1| Peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
Length = 207
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN VGF +ID A G+S+N + F G + V+L KP
Sbjct: 24 LFVGLGNPGKEYEQTRHN-VGFMVIDELAHRWGLSLNQTKFQGIFTSGMISGEKVILCKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 83 LTYMNLSGECVRPLMDYYNIDVDDLIVIYDDLDLSTGTVRLRPKGSAGGHNGMKSLIHHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ +F R+RIGI RP M ++L ++ A + +I+ A+Q+ + + L +
Sbjct: 143 K-TEQFKRIRIGIDRPKNGMRVSDYVLGRWTAEEKIQIEQAIQKAADACERSLKISFAQV 201
Query: 200 ARHFN 204
FN
Sbjct: 202 MNEFN 206
>gi|336176810|ref|YP_004582185.1| peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
gi|334857790|gb|AEH08264.1| Peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG Y G RHN +GF ++D AE T +A + + LLA
Sbjct: 13 PWLVVGLGNPGPTYAGNRHN-IGFMVLDLLAERVRDRFRTHRGRADVAEARLAGVRALLA 71
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+++MN+SG L A++K+ + ++V HD++ +P G +RL+ GG GHNGL+SV
Sbjct: 72 KPRSFMNVSGSPVEALRAFFKVDIGHIVVVHDELDIPFGTIRLKLGGGDNGHNGLRSVTA 131
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G+R++ R+R+GIGRPPG+M+P F+L+ F+A R+ + + + ++ LL +GL
Sbjct: 132 AL-GSRDYLRVRVGIGRPPGRMNPADFVLRDFSAPERKELPFLVDRAADAVESLLDRGLE 190
Query: 198 ESARHFNT 205
+ F+
Sbjct: 191 VTQNTFHV 198
>gi|423388179|ref|ZP_17365405.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-3]
gi|401644369|gb|EJS62061.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG1X1-3]
Length = 186
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDIEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEELPGVNQSIEKTADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|357053332|ref|ZP_09114428.1| peptidyl-tRNA hydrolase [Clostridium clostridioforme 2_1_49FAA]
gi|355385807|gb|EHG32855.1| peptidyl-tRNA hydrolase [Clostridium clostridioforme 2_1_49FAA]
Length = 216
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+ TRHN VGFE+ID A+ G ++ K +G+G +G VLL K
Sbjct: 29 YIIAGLGNPTREYEKTRHN-VGFEVIDVLADRLGTTVEEKKFKGCYGRGIIGGQKVLLLK 87
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES A +YK+ +++ +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 88 PQTFMNLSGESVRAAADFYKVDPEHIIIVYDDISLDVGQLRIRKKGSAGGHNGIKNIIAH 147
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+++G+G P +MD ++L +F+ R ++ A +E +++++ +G
Sbjct: 148 L-GTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAVMEDAFREAAGAVEMMIIQGADA 206
Query: 199 SARHFN 204
+ FN
Sbjct: 207 AMNQFN 212
>gi|404372896|ref|ZP_10978177.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
gi|226914271|gb|EEH99472.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
Length = 191
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 4/192 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y GTRHN +GFE ID + I +N K +G+GF+ + V+L K
Sbjct: 2 FLIVGLGNPGKEYDGTRHN-IGFEAIDYISNKYNIDINRTKFKGVYGEGFINNNKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +YKL + V+V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PTTYMNLSGESIREVINFYKLENDEVIVIYDDISLEVGKLRIREKGSAGGHNGIKSIIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R++IG+G+P D + +L +FN + + + + +++++ G E
Sbjct: 121 I-GTDIFPRVKIGVGQPTS--DLVSHVLGRFNKEDMDSLIEVIDASSKAVEVIIKDGTKE 177
Query: 199 SARHFNTIQKYK 210
+ FN + K
Sbjct: 178 AMNRFNGFKTSK 189
>gi|68052974|sp|Q73FF7.2|PTH_BACC1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 186
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|325662343|ref|ZP_08150952.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471345|gb|EGC74568.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 192
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ +GLGNP +Y+GTRHN VGF++ID E I+++T KA G+G + V+L K
Sbjct: 2 YIIIGLGNPTAQYEGTRHN-VGFDVIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYK+ VLV +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESVRELVDYYKVDAEEEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G + F R+++G+G P D ++L F+ R +++ E ++L+L+ +
Sbjct: 121 HL-GTQVFPRIKVGVGEKPKNYDLADYVLGHFSKAERAQMEEGYDRATEAVRLILAGEID 179
Query: 198 ESARHFNTIQ 207
+ +N Q
Sbjct: 180 AAMNQYNKKQ 189
>gi|296329555|ref|ZP_06872041.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672752|ref|YP_003864423.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153298|gb|EFG94161.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410995|gb|ADM36113.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 188
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHN-VGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLMDYYDVDNGDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L FN ID A+ + V+ + LSK E
Sbjct: 122 -GTSEFDRIRIGIGRPVNGMKVVDYVLGSFNKEEVPDIDGAIDKSVKACEASLSKPFLEV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNEFNA 186
>gi|429765477|ref|ZP_19297769.1| aminoacyl-tRNA hydrolase [Clostridium celatum DSM 1785]
gi|429186296|gb|EKY27247.1| aminoacyl-tRNA hydrolase [Clostridium celatum DSM 1785]
Length = 191
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y GTRHN +GFE +D A+ I +N + K FG+G + V+L K
Sbjct: 2 FLIVGLGNPGSEYNGTRHN-IGFEAVDYIADKYNIELNRIKFKGIFGEGLINGKKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +YK+ ++V +DD+ L G LR+R G HGGHNG+KS++ N
Sbjct: 61 PTTYMNLSGESIREVVNFYKISNEEIIVIYDDISLDVGRLRIREKGSHGGHNGIKSIIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R++IG+G P G + + +L KFN + L E + ++L + +
Sbjct: 121 L-GTDVFPRVKIGVGAPKGNL--VSHVLGKFNEEEINVLRKTLIATEEAVNVMLKNDVKD 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMNKFN 183
>gi|291535573|emb|CBL08685.1| peptidyl-tRNA hydrolase [Roseburia intestinalis M50/1]
Length = 212
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF+++DA AE IS++ KA G+G + V+LAKP
Sbjct: 23 LIVGLGNPGKQYEHTRHN-IGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAKP 81
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
QTYMNLSGES L YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 82 QTYMNLSGESVTELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNII-A 140
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+++G+G P D +L F+ R ++ A+ VE +++++ G T+
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDTADRAEVEKAIGHAVEAAEMMIT-GETD 199
Query: 199 SARHFNTIQK 208
+A + ++K
Sbjct: 200 AAMNRYNVKK 209
>gi|89100523|ref|ZP_01173384.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
gi|89084789|gb|EAR63929.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
Length = 187
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN +GF++ID + I ++ K FG G V V L KP
Sbjct: 3 LFVGLGNPGKEYEKTRHN-IGFDVIDRLSGKLNIPLDQAKFKGVFGMGRVDGEKVFLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YY + + V +DD+ LP G +RLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGESIRPLMDYYDIDTEDLAVIYDDLDLPPGKIRLRQKGSAGGHNGIKSTIAH- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF+R+R+GIGRP G M ++L +F A ++ +D A + + K E
Sbjct: 121 TGTQEFSRIRVGIGRPEGGMKVTDYVLGRFTAEEQKVMDEAADRSADACIDWIRKPFLEV 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNQYN 185
>gi|423416555|ref|ZP_17393644.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-1]
gi|401110209|gb|EJQ18120.1| peptidyl-tRNA hydrolase [Bacillus cereus BAG3X2-1]
Length = 186
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEELPGVNQSIEKTADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>gi|423651372|ref|ZP_17626942.1| peptidyl-tRNA hydrolase [Bacillus cereus VD169]
gi|401278424|gb|EJR84357.1| peptidyl-tRNA hydrolase [Bacillus cereus VD169]
Length = 207
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP + ++L +F + ++ ++++ + + L+K +
Sbjct: 143 -GTQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 201
Query: 200 ARHFNT 205
FN+
Sbjct: 202 MNTFNS 207
>gi|226323671|ref|ZP_03799189.1| hypothetical protein COPCOM_01446 [Coprococcus comes ATCC 27758]
gi|225207855|gb|EEG90209.1| aminoacyl-tRNA hydrolase [Coprococcus comes ATCC 27758]
Length = 191
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 114/191 (59%), Gaps = 3/191 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +KY+GTRHN VGF+++D AE I+++T +A G+G + VLL K
Sbjct: 2 FIIAGLGNPDEKYQGTRHN-VGFDVVDRLAEKYQIAIDTKKHRALIGKGVIEGQKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYK+ P +LV +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESIRSLVEYYKIDPEEELLVIYDDISLEVGQLRIRRKGSAGGHNGIKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
N G+ F R+++G+G P D ++L KF+ R ++ E L++ +
Sbjct: 121 NL-GSSVFPRIKVGVGEKPKGYDLADYVLGKFSKEDRVLMEEGYDLACEASALIMQGAID 179
Query: 198 ESARHFNTIQK 208
++ +N +K
Sbjct: 180 QAMNEYNQKKK 190
>gi|291087007|ref|ZP_06345123.2| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
gi|291076615|gb|EFE13979.1| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
Length = 202
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG+KY TRHN GF IDA A+ GI + KA G+G + V+LAK
Sbjct: 5 YIIAGLGNPGEKYDNTRHN-AGFLTIDALADRYGIDVREKAHKALIGKGVIEGQKVILAK 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES L YYK+ +++ DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 64 PQTYMNLSGESIRALVDYYKVTQEELVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIAH 123
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+++G+G P +MD ++L +F ++ + A + + ++++G
Sbjct: 124 L-GTQEFTRIKVGVGEKPPRMDLADYVLGRFAKEEQDTMKEAFETAAKAAVAIMTEGADA 182
Query: 199 SARHFN 204
+ +N
Sbjct: 183 AMNQYN 188
>gi|317126793|ref|YP_004093075.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
gi|315471741|gb|ADU28344.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
Length = 204
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Query: 6 FLRRGFCTAVARPW-LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATF 64
F R+G + A P L VGLGNPG KY GTRHN VGFE+ID + + ++ K +
Sbjct: 7 FQRQGKTESEALPMKLVVGLGNPGSKYDGTRHN-VGFEVIDRCQQLFQLDLDQSKFKGIY 65
Query: 65 GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 124
G + + L KP T+MNLSGES PL Y+K+P +LV +DD+ L G +RLR G
Sbjct: 66 GYKVIEGEKIFLLKPLTFMNLSGESVIPLMKYFKIPTEDLLVIYDDLDLAPGKIRLRQKG 125
Query: 125 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 184
G GGHNG+KS++++ G EF R+RIGIGRPP ++L F+ R +D +++
Sbjct: 126 GAGGHNGMKSIISHL-GTEEFNRIRIGIGRPPKGYAVPDYVLGSFSNEERNAVDESIETA 184
Query: 185 VEVLKLLLSKGLTESARHFN 204
+ + FN
Sbjct: 185 AKAVDAWTKDSFINVMNTFN 204
>gi|218134567|ref|ZP_03463371.1| hypothetical protein BACPEC_02470 [[Bacteroides] pectinophilus ATCC
43243]
gi|217989952|gb|EEC55963.1| aminoacyl-tRNA hydrolase [[Bacteroides] pectinophilus ATCC 43243]
Length = 187
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+GTRHN +GF +ID A++ I+M+ K G+G +G VLL K
Sbjct: 2 YIIAGLGNPGKQYEGTRHN-IGFAVIDELADAYNINMDMAKHKGICGKGMIGSNKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE + YYK ++ VLV +DD+ L G LRLR G GGHNG+KS++ +
Sbjct: 61 PQTFMNNSGECLREVLDYYKEDVDNVLVIYDDICLDVGRLRLRPKGSAGGHNGIKSIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF+R+R+G+G P D ++L F + + + + V+ + ++L +G+ E
Sbjct: 121 L-GTEEFSRIRVGVGDKPKNYDLADWVLGHFPKEQLDDVRAGIDKAVKAVPVVLDRGIEE 179
Query: 199 SARHFNT 205
FN
Sbjct: 180 GMNEFNA 186
>gi|347532905|ref|YP_004839668.1| aminoacyl-tRNA hydrolase [Roseburia hominis A2-183]
gi|345503053|gb|AEN97736.1| aminoacyl-tRNA hydrolase [Roseburia hominis A2-183]
Length = 194
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN GF+++DA AE IS++ KA FG+G +G V+LAK
Sbjct: 2 FLIVGLGNPGRQYEHTRHN-AGFDVMDALAEKYNISISESGHKALFGKGMIGGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQT+MNLSGES L YYK+ P +LV DD+ L G +R+R G GGHNG+K+++
Sbjct: 61 PQTFMNLSGESVAELLHYYKIDPEEELLVIFDDISLAPGNIRIRKKGSAGGHNGIKNII- 119
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G F R+++G+G P D +L + + R + A++E V+ +++L +
Sbjct: 120 AMTGTENFKRIKVGVGEKPAGWDLADHVLGRMSEEDRAAFEEAVKESVKAAEMILEDEID 179
Query: 198 ESARHFN 204
++ FN
Sbjct: 180 QAMNDFN 186
>gi|339442232|ref|YP_004708237.1| hypothetical protein CXIVA_11690 [Clostridium sp. SY8519]
gi|338901633|dbj|BAK47135.1| hypothetical protein CXIVA_11690 [Clostridium sp. SY8519]
Length = 206
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNP +Y+ TRHN +GF+ +D A GI+MN C+A G G+ VLLAK
Sbjct: 2 YLIAGLGNPTAQYEKTRHN-IGFDAVDVLARKCGITMNRRQCQALTGTGYCEGQKVLLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P TYMNLSG S L YY+L P ++V +DD+ L G +R+R G GGHNG+K ++
Sbjct: 61 PLTYMNLSGHSIRDLMRYYRLDPEQDLIVLYDDISLDPGSIRVRKKGSAGGHNGIKDII- 119
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F+R+RIG+G P D ++L + R++ D AL+E + + L+++
Sbjct: 120 AMTGTSDFSRVRIGVGAKPRDWDLADYVLGRMQGEDRKQADQALEEAAQAVGLMITGRTD 179
Query: 198 ESARHFNTIQK 208
E+ FN +K
Sbjct: 180 EAMNRFNRKKK 190
>gi|42524124|ref|NP_969504.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus HD100]
gi|68052963|sp|Q6MJR3.1|PTH_BDEBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39576332|emb|CAE80497.1| pth [Bdellovibrio bacteriovorus HD100]
Length = 187
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +YK TRHN +GF +D E G KA Q + D PV+ K
Sbjct: 2 WLIVGLGNPGGEYKLTRHN-IGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES PL +YK+PL R++V HD++ P ++++ N GHGGHNG+KS+ +
Sbjct: 61 PQTYMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSI-SG 119
Query: 139 FRGNREFARLRIGIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G+ ++ RLR+G+GRP P ++L KF ++ L + + ++ ++ G+
Sbjct: 120 LMGSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQ 179
Query: 198 ESARHFNT 205
+++ FNT
Sbjct: 180 KASTKFNT 187
>gi|228995442|ref|ZP_04155112.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
gi|228764303|gb|EEM13180.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
Length = 186
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ GIS++ K +G GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMGIDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIGVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F A ++ ++++ + + L K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEELPEVNQSIEKAADACEEWLKKPFLQI 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNTFN 185
>gi|295090935|emb|CBK77042.1| peptidyl-tRNA hydrolase [Clostridium cf. saccharolyticum K10]
gi|295116084|emb|CBL36931.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SM4/1]
Length = 199
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG+KY TRHN GF IDA A+ GI + KA G+G + V+LAK
Sbjct: 2 YIIAGLGNPGEKYDNTRHN-AGFLTIDALADRYGIDVREKAHKALIGKGVIEGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES L YYK+ +++ DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 61 PQTYMNLSGESIRALVDYYKVTQEELVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+++G+G P +MD ++L +F ++ + A + + ++++G
Sbjct: 121 L-GTQEFTRIKVGVGEKPPRMDLADYVLGRFAKEEQDTMKEAFETAAKAAVAIMTEGADA 179
Query: 199 SARHFN 204
+ +N
Sbjct: 180 AMNQYN 185
>gi|210608665|ref|ZP_03287942.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
gi|210152922|gb|EEA83928.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
Length = 224
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNP +Y+GTRHN GF++ID AE IS++ C+A G+G + VLL K
Sbjct: 35 FVIVGLGNPTAQYEGTRHN-AGFDVIDVLAEKYNISVDARKCRAFCGKGVIAGQKVLLVK 93
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES G + YYK+ P + +LV +DD+ L G LR+R G GGHNG+KS++
Sbjct: 94 PQTYMNLSGESVGGIVNYYKIDPESDLLVIYDDISLDVGQLRIRKKGSAGGHNGIKSIIA 153
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G F R+++G+G P D ++L F+ RE ++ + + ++ ++ +
Sbjct: 154 HL-GTTVFPRIKVGVGEKPKNYDLADYVLGHFSKQERELMEEGYEHASDAVEQIVQGEIE 212
Query: 198 ESARHFN 204
+ FN
Sbjct: 213 AAMNVFN 219
>gi|403386102|ref|ZP_10928159.1| peptidyl-tRNA hydrolase [Kurthia sp. JC30]
Length = 188
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LF+GLGNPG +Y+ TRHN VGF+ IDA A I +N A +G + V+L KP
Sbjct: 3 LFIGLGNPGKQYEHTRHN-VGFDTIDALANKWSIDLNQTKFNAVYGMSHRPEGKVILMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE+ PL YY + + ++V +DDM + LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGEAVRPLMDYYDIDIEDIVVIYDDMDIDQASLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G + F RLR+GIGRPP M ++L F+ + A ++ + + K E
Sbjct: 122 -GTQNFNRLRVGIGRPPQGMKVPDYVLSHFSKEDWADMQAAYEKAADACEYFTQKPYAEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNKFN 185
>gi|410461743|ref|ZP_11315388.1| peptidyl-tRNA hydrolase [Bacillus azotoformans LMG 9581]
gi|409925447|gb|EKN62660.1| peptidyl-tRNA hydrolase [Bacillus azotoformans LMG 9581]
Length = 187
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 107/184 (58%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG Y+ TRHN VGF +ID G+S+N K +G G + V+L KP
Sbjct: 4 IVGLGNPGKNYEKTRHN-VGFMVIDELCRRWGLSLNKEKFKGIYGMGSINGEKVILLKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGES PL YY++ + ++V +DD+ LP G +RLR G GGHNG+KS + +
Sbjct: 63 TYMNLSGESIRPLLDYYEIDVEDLIVIYDDLDLPTGKIRLRTKGSAGGHNGIKSTIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G + F RLRIGI RP M ++L F+A + I+ A+++ + + LS E
Sbjct: 122 GTQNFNRLRIGINRPVNGMKVPDYVLGVFSAEEQPEIEGAIKQAADACEKWLSHTFLEVM 181
Query: 201 RHFN 204
FN
Sbjct: 182 NEFN 185
>gi|270307957|ref|YP_003330015.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
gi|270153849|gb|ACZ61687.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
Length = 189
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 111/189 (58%), Gaps = 5/189 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG +Y G RHN VGF+ + FA+ IS++ C + G G + D ++LAKP
Sbjct: 3 LIIGLGNPGKEYSGNRHN-VGFQCLSRFAKDNHISLDKKCCLSRTGSGRINDEEIVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L Y L ++V DD+ LP G +RLR G GGHNG+ S++ +
Sbjct: 62 QTYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G +EF RL+IGIG+P + + +L F RE ++ A+ E L LL+ GL
Sbjct: 122 -GTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMEKAITRASEALTCLLTCGL 180
Query: 197 TESARHFNT 205
++ FN+
Sbjct: 181 DTASNRFNS 189
>gi|57234607|ref|YP_181337.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
gi|119390932|sp|Q3Z8W2.1|PTH_DEHE1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57225055|gb|AAW40112.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
Length = 189
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG +Y G RHN VGF+ + FA+ IS + C + G G + D ++LAKP
Sbjct: 3 LIIGLGNPGKEYSGNRHN-VGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L Y L ++V DD+ LP G +RLR G GGHNG+ S++ +
Sbjct: 62 QTYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G +EF RL+IGIG+P + + +L F RE +D A+ E L LL+ GL
Sbjct: 122 -GTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGL 180
Query: 197 TESARHFNT 205
++ FN+
Sbjct: 181 DTASNRFNS 189
>gi|323485662|ref|ZP_08091000.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
gi|355624617|ref|ZP_09047811.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_3_54FAA]
gi|323401012|gb|EGA93372.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
gi|354821779|gb|EHF06158.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_3_54FAA]
Length = 202
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y G+RHN VGF +D A+ I + KA G+G + V+L K
Sbjct: 2 YIIAGLGNPGKEYAGSRHN-VGFMTLDELADRYNIDVREKAHKALIGKGMIEGNKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES + YYK + +V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 PQTYMNLSGESIRSVMDYYKTEPSEFIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+RIG+G P +MD ++L F+ +ER++ A ++G +++ G+
Sbjct: 121 L-GTQEFPRIRIGVGEKPARMDLADYVLGHFSKEEKERMEQAFKDGAAAAVAMMNDGVDT 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 AMNRFN 185
>gi|311070700|ref|YP_003975623.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
gi|419823436|ref|ZP_14346983.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus C89]
gi|310871217|gb|ADP34692.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
gi|388472409|gb|EIM09185.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus C89]
Length = 188
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF ID A+ I +N +G GFV VLL KP
Sbjct: 3 VLAGLGNPGKNYENTRHN-VGFMTIDQLAKEWNIELNQTKFNGLYGTGFVSGQKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLMDYYDVGNEELKVIYDDLDLPAGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F ID A+ + V+ + LSK E
Sbjct: 122 -GTSEFDRIRIGIGRPVNGMKVVDYVLGAFTKEEAPAIDEAISKSVKACEASLSKPFLEV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNEFNA 186
>gi|291518348|emb|CBK73569.1| peptidyl-tRNA hydrolase [Butyrivibrio fibrisolvens 16/4]
Length = 189
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 116/191 (60%), Gaps = 4/191 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNP KY GTRHN VGFE IDA ++ GI +N K G+G + V+LAK
Sbjct: 2 YLIVGLGNPERKYDGTRHN-VGFEAIDAISKKFGIEVNHKEHKGLVGKGIINGKKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGE PL YY++ P ++V DD+ L G +R+R G GGHNGLK+++
Sbjct: 61 PQTYMNLSGECVLPLTDYYEIDPSTEMVVISDDVLLSTGNIRVRKKGSAGGHNGLKNII- 119
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G+ EF R+R+G+G D + +L +++ RER+D ++++ + ++L L L
Sbjct: 120 ALIGSNEFPRIRVGVGECENG-DMVSHVLGRYDKEDRERVDASMEKVIGAVELFLDGDLD 178
Query: 198 ESARHFNTIQK 208
+ +N +K
Sbjct: 179 SAMNKYNVKEK 189
>gi|443635055|ref|ZP_21119225.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443345108|gb|ELS59175.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 188
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHN-VGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F ID A+ + V+ + LSK E
Sbjct: 122 -GTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIDGAVDKSVKACEASLSKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|350264153|ref|YP_004875460.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349597040|gb|AEP84828.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 188
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHN-VGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F ID A+ + V+ + LSK E
Sbjct: 122 -GTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPDIDGAIDKSVKACEASLSKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|289422642|ref|ZP_06424483.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
gi|429728199|ref|ZP_19262937.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius VPI 4330]
gi|289156942|gb|EFD05566.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
gi|429150341|gb|EKX93261.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius VPI 4330]
Length = 186
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ +GLGNPG KY+ TRHN GF+++D A+ +S++ + KA G+ +G V+L K
Sbjct: 2 YIIMGLGNPGKKYENTRHN-AGFDVVDELAKRLNVSIDKIKHKALIGEARIGTEKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE+ ++ +YK+ L++++V +DD+ L G LR+R G G HNG+KS++
Sbjct: 61 PQTYMNLSGETAISISQFYKMDLDKLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIKC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+++F R+R+G+ +P D F+L + + +D A+++ ++ ++ GL
Sbjct: 121 L-GSQDFPRVRVGVSKPEPGRDLADFVLSRVPKDRQNDMDLAIEKAASTVEEIIRSGLDV 179
Query: 199 SARHFN 204
+ +N
Sbjct: 180 AMNKYN 185
>gi|317133015|ref|YP_004092329.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
gi|315470994|gb|ADU27598.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
Length = 208
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
A W+ GLGNPG +Y+GTRHN GF +D A G+ ++ KA G G V VL
Sbjct: 20 APEWIVAGLGNPGIQYEGTRHN-AGFAALDMLAAKNGVRIDRAKFKALCGIGQVAGKRVL 78
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KPQT+MNLSGE+ A +YKLP+ RVLV DD+ LP G LR+R G GGHNG+KS+
Sbjct: 79 LLKPQTFMNLSGEAVAAAAHFYKLPVERVLVLFDDISLPVGKLRVRRKGSAGGHNGIKSI 138
Query: 136 MNNFRGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ G+ F R++IG+G +P D +++L KF+ R +L E ++ L+
Sbjct: 139 IGEC-GSDGFPRVKIGVGDKPRPDYDLASWVLGKFSEAERPVFAQSLDRAAEAVEELIQN 197
Query: 195 GLTESARHFNT 205
G+ + +N+
Sbjct: 198 GVGSAMNLYNS 208
>gi|374294798|ref|YP_005044989.1| peptidyl-tRNA hydrolase [Clostridium clariflavum DSM 19732]
gi|359824292|gb|AEV67065.1| peptidyl-tRNA hydrolase [Clostridium clariflavum DSM 19732]
Length = 203
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD 71
C + + +GLGNPG +Y+ TRHN VGF+ ID ++ I++ V KA G G +G
Sbjct: 11 CNILENLSVVIGLGNPGPRYENTRHN-VGFDTIDRLSKKHNIAVTKVKYKAVIGDGNIGG 69
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
VLL KPQT+MNLSGES + +YK+P+ +++ +DD+ LP G +R+R G G HNG
Sbjct: 70 HRVLLVKPQTFMNLSGESVREIIEWYKVPVKNIIIIYDDIDLPVGKIRIRPKGSAGTHNG 129
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
++SV+ + + +F R+RIGI +PP + F+L KF+A R+ ++ A++ + ++++
Sbjct: 130 MRSVIYQIQ-SEDFPRIRIGIDKPPQGWELADFVLSKFSADERKSVEEAIENAADAVEVI 188
Query: 192 LSKGLTESARHFNT 205
L+ G+ ++ +N
Sbjct: 189 LNSGIDKAMNRYNN 202
>gi|163815684|ref|ZP_02207056.1| hypothetical protein COPEUT_01864 [Coprococcus eutactus ATCC 27759]
gi|158448989|gb|EDP25984.1| aminoacyl-tRNA hydrolase [Coprococcus eutactus ATCC 27759]
Length = 186
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY GTRHN GF +ID AE I ++T KA G+G + V+LA P
Sbjct: 3 LIVGLGNPGAKYAGTRHN-AGFSVIDELAERHNIKVDTCKHKALIGKGVINGEKVILAMP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES + +YKL ++ ++V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 62 QTFMNLSGESVRAIMDFYKLTVDDLIVVYDDIDLDVGKIRIREKGSAGGHNGMKNIILH- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+++F R+R+G+G+ P MD +L +F+ + + + + L+++LS G +
Sbjct: 121 SGSQDFVRVRVGVGKKPEHMDLADHVLSRFSREDLPFMRESCGKACDALEVILSDGAVAA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNRYN 185
>gi|299536724|ref|ZP_07050034.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
gi|424740017|ref|ZP_18168429.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZB2]
gi|298727838|gb|EFI68403.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
gi|422946389|gb|EKU40800.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZB2]
Length = 188
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG Y+ TRHN +GF++IDA AE G + + + VLL KP
Sbjct: 3 IIVGLGNPGKPYEHTRHN-IGFDVIDALAEKWGTPLTNSKFNGMYTTVHRPEGKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE GPL Y+ + + ++V +DD+ L G LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECVGPLMDYFDIEIEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RPP M ++L KF+ + + A+ V ++ LSK +
Sbjct: 122 -GTQEFNRIRVGINRPPAGMKVADYVLAKFSKEDQVLMQDAIVNSVNAVEASLSKPFLDV 180
Query: 200 ARHFNT 205
HFN
Sbjct: 181 MNHFNV 186
>gi|170755332|ref|YP_001783180.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
gi|429244323|ref|ZP_19207788.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001628]
gi|229470295|sp|B1IGZ7.1|PTH_CLOBK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169120544|gb|ACA44380.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
gi|428758644|gb|EKX81051.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001628]
Length = 189
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE ID L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDQREIIDKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|261417546|ref|YP_003251228.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|319765203|ref|YP_004130704.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
gi|261374003|gb|ACX76746.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|317110069|gb|ADU92561.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
Length = 186
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG++Y+ TRHN VGF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGEEYEQTRHN-VGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 62 LTYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRP G ++L +F + +D A+ + + + +
Sbjct: 122 -GTEQFKRIRIGIGRPTGGQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNDFN 185
>gi|365926653|ref|ZP_09449416.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420264919|ref|ZP_14767518.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394429555|gb|EJF01983.1| peptidyl-tRNA hydrolase [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 187
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 112/192 (58%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGN G +Y GTRHN VGF ++D A+ +GIS N V +AT ++LAKP
Sbjct: 3 LIVGLGNIGKEYDGTRHN-VGFMVLDELAKREGISFNKVKNEATLADFMFKGEKIILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG S PL +YK+P+ V+V HDDM LP G LRLR G GGHNG+KS++++
Sbjct: 62 LTYMNESGRSVRPLMDFYKIPVEDVIVIHDDMDLPVGHLRLRQKGSAGGHNGIKSLISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R++IGI P +M ++L +F + +++ + E + L ++
Sbjct: 122 -GTQEFKRMKIGIDHPQ-RMSVVNWVLSRFTKEQQNQLERGINEALAAL-----DNWIDT 174
Query: 200 ARHFNTIQKYKH 211
T+ KY H
Sbjct: 175 DNFMGTMNKYNH 186
>gi|52078548|ref|YP_077339.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319648577|ref|ZP_08002791.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
gi|404487418|ref|YP_006711524.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423680446|ref|ZP_17655285.1| peptidyl-tRNA hydrolase [Bacillus licheniformis WX-02]
gi|68052915|sp|Q65PG8.1|PTH_BACLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52001759|gb|AAU21701.1| peptidyl-tRNA hydrolase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346412|gb|AAU39046.1| peptidyl-tRNA hydrolase Pth [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317389344|gb|EFV70157.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
gi|383441552|gb|EID49261.1| peptidyl-tRNA hydrolase [Bacillus licheniformis WX-02]
Length = 188
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+F GLGNPG Y+ TRHN VGF ID ++ I ++ +G GFV VLL KP
Sbjct: 3 VFAGLGNPGKTYENTRHN-VGFMTIDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY++P++ + V +DD+ LP G +RLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGECLRPLLDYYEIPVDNLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I A+++ + + L K E
Sbjct: 122 -GTSEFNRIRIGIGRPVNGMKVVDYVLGAFTDEEEPAIKEAVRQSAKACEASLEKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|357399722|ref|YP_004911647.1| Peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337766131|emb|CCB74842.1| Peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 195
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 3/192 (1%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
A A PWL GLGNPG +Y G RHN +GF ++D AE G + +A +G +
Sbjct: 7 APAGPWLVAGLGNPGPEYAGNRHN-IGFMVVDLLAERIGGRFKSHRSRAQVVEGRIAGQR 65
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V+LAKP TYMN SG L +YK+P+ ++ HD++ + LRL+ GG GHNGLK
Sbjct: 66 VVLAKPMTYMNTSGGPVTALRDFYKVPVANLVAVHDELDIGYATLRLKRGGGDNGHNGLK 125
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
S+ E+ R+R GIGRPPG+M+ +F+L+ F++ R+ +D + + ++ L++
Sbjct: 126 SITKAL--GPEYLRVRCGIGRPPGRMEVASFVLKDFSSAERKELDWFVDRAADAVEALIA 183
Query: 194 KGLTESARHFNT 205
+GL + +N+
Sbjct: 184 EGLERAQSTYNS 195
>gi|386355761|ref|YP_006054007.1| peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806269|gb|AEW94485.1| peptidyl-tRNA hydrolase [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 200
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 3/192 (1%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
A A PWL GLGNPG +Y G RHN +GF ++D AE G + +A +G +
Sbjct: 12 APAGPWLVAGLGNPGPEYAGNRHN-IGFMVVDLLAERIGGRFKSHRSRAQVVEGRIAGQR 70
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V+LAKP TYMN SG L +YK+P+ ++ HD++ + LRL+ GG GHNGLK
Sbjct: 71 VVLAKPMTYMNTSGGPVTALRDFYKVPVANLVAVHDELDIGYATLRLKRGGGDNGHNGLK 130
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
S+ E+ R+R GIGRPPG+M+ +F+L+ F++ R+ +D + + ++ L++
Sbjct: 131 SITKAL--GPEYLRVRCGIGRPPGRMEVASFVLKDFSSAERKELDWFVDRAADAVEALIA 188
Query: 194 KGLTESARHFNT 205
+GL + +N+
Sbjct: 189 EGLERAQSTYNS 200
>gi|345008848|ref|YP_004811202.1| peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
gi|344035197|gb|AEM80922.1| Peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
Length = 196
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 8/198 (4%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG-- 70
T A PWL VGLGNPG +Y G RHN VGF + D A G +A +G VG
Sbjct: 2 TDDASPWLVVGLGNPGGEYVGNRHN-VGFMVADLLAGRMGARFKAHKSRAQVVEGRVGPP 60
Query: 71 ---DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHG 127
V++AKP ++MNLSG L +YK+P+ V+ HD++ + G LRL+ GG
Sbjct: 61 GPSSRRVVVAKPMSFMNLSGGPVTALRDFYKVPVGHVVAVHDELDIDYGALRLKVGGGDN 120
Query: 128 GHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 187
GHNGLKS+ + ++ R+R GIGRPPG+MD AF+L+ F+A R+ +D + +
Sbjct: 121 GHNGLKSITKSL--GADYCRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADA 178
Query: 188 LKLLLSKGLTESARHFNT 205
++ L++ GL + +N+
Sbjct: 179 VETLIADGLERAQGTYNS 196
>gi|302669663|ref|YP_003829623.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
gi|302394136|gb|ADL33041.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
Length = 226
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 114/193 (59%), Gaps = 3/193 (1%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+ ++ GLGNP KY GTRHN VGF IDA ++ GI + KA FG+G +G+ V+L
Sbjct: 33 KMYIIAGLGNPEKKYFGTRHN-VGFATIDALSDKYGIELTETKFKAAFGKGRIGNDRVIL 91
Query: 77 AKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
KP TYMNLSGE+ P+ Y+K+ ++V DD+ L G +R+R G GGHNGLKS+
Sbjct: 92 VKPLTYMNLSGEAIRPICDYFKVDSKEELIVISDDVELDVGNIRVRPKGSAGGHNGLKSI 151
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ G+ EF R+R+G+G+ P + D ++L F I + V ++ +++ G
Sbjct: 152 IAQL-GHSEFNRVRVGVGKKPKEWDMVDWVLGTFQGEDAVSIKEGIDRAVAAVEEIMAAG 210
Query: 196 LTESARHFNTIQK 208
+ + +NTI+K
Sbjct: 211 VDSAMNKYNTIKK 223
>gi|375087627|ref|ZP_09733973.1| peptidyl-tRNA hydrolase [Dolosigranulum pigrum ATCC 51524]
gi|374563903|gb|EHR35207.1| peptidyl-tRNA hydrolase [Dolosigranulum pigrum ATCC 51524]
Length = 186
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 106/171 (61%), Gaps = 2/171 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG KY+GT+HN +GF ID A GI++N ++T+G+ +G V+L KP
Sbjct: 3 LIIGLGNPGKKYEGTKHN-IGFITIDELAHQLGITLNKSKFESTYGEARIGTEKVILIKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG S P YY L + VLV +DD+ LP G +RLR GG GGHNG+KS++ N+
Sbjct: 62 QTFMNNSGRSVRPWLDYYDLSTDDVLVIYDDLDLPVGKVRLREAGGSGGHNGIKSII-NY 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
++ F R++IGIGRP + + ++ F + + A++ V+ +
Sbjct: 121 LSSKTFNRIKIGIGRPYAEQTVISHVMSTFPKETHDDMLVAVRSAVDATRF 171
>gi|16077121|ref|NP_387934.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307863|ref|ZP_03589710.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312185|ref|ZP_03593990.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317118|ref|ZP_03598412.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321381|ref|ZP_03602675.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313723|ref|YP_004206010.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
gi|384173714|ref|YP_005555099.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|386756632|ref|YP_006229848.1| peptidyl-tRNA hydrolase [Bacillus sp. JS]
gi|402774296|ref|YP_006628240.1| peptidyl-tRNA hydrolase [Bacillus subtilis QB928]
gi|418030601|ref|ZP_12669086.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428277468|ref|YP_005559203.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. natto BEST195]
gi|430757318|ref|YP_007211206.1| Stage V sporulatio protein SpoVC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452913216|ref|ZP_21961844.1| peptidyl-tRNA hydrolase [Bacillus subtilis MB73/2]
gi|586021|sp|P37470.1|PTH_BACSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; AltName:
Full=Stage V sporulation protein C
gi|467442|dbj|BAA05288.1| stage V sporulation [Bacillus subtilis]
gi|2632320|emb|CAB11829.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|291482425|dbj|BAI83500.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. natto BEST195]
gi|320019997|gb|ADV94983.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
gi|349592938|gb|AEP89125.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351471660|gb|EHA31773.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|384929914|gb|AFI26592.1| peptidyl-tRNA hydrolase [Bacillus sp. JS]
gi|402479482|gb|AFQ55991.1| Peptidyl-tRNA hydrolase [Bacillus subtilis QB928]
gi|407955744|dbj|BAM48984.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7613]
gi|407963015|dbj|BAM56254.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7003]
gi|430021838|gb|AGA22444.1| Stage V sporulatio protein SpoVC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452118244|gb|EME08638.1| peptidyl-tRNA hydrolase [Bacillus subtilis MB73/2]
Length = 188
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHN-VGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I+ A+ + V+ + LSK E
Sbjct: 122 -GTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEEAVDKSVKACEASLSKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|160895087|ref|ZP_02075861.1| hypothetical protein CLOL250_02638 [Clostridium sp. L2-50]
gi|156863518|gb|EDO56949.1| aminoacyl-tRNA hydrolase [Clostridium sp. L2-50]
Length = 185
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY GTRHN VGF +I A+ I ++ KA +G+G + V+LA P
Sbjct: 3 LIVGLGNPGTKYAGTRHN-VGFSVIVGLADKYNIELSEKKHKAIYGRGMIEGEKVILAMP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES L YYK + V+V +DD+ L G LR+R G GGHNG+K+++++
Sbjct: 62 QTFMNLSGESVRELVDYYKCDPSDVIVAYDDIDLAVGKLRIREKGSAGGHNGMKNIISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GIG+ P +MD ++L +F I + + L+L +
Sbjct: 122 -GTQEFVRVRVGIGKKPDRMDLADYVLSRFGKDELPEIKAGCDNAGDAIALILKDSAAAA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNKYN 185
>gi|187935710|ref|YP_001884405.1| peptidyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
gi|238691600|sp|B2TI10.1|PTH_CLOBB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187723863|gb|ACD25084.1| aminoacyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
Length = 191
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG KY TRHN +GFE+ID + I +N + +G+GF+ + V+L K
Sbjct: 2 FLIVGLGNPGSKYDNTRHN-IGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S +A +YK+ ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+++G+G+P +D ++L KF+ +E + +++ ++ ++ + +
Sbjct: 121 LSTDV-FPRIKVGVGQP--NIDLVNYVLGKFSKEEKEVLKESIEVATNSVEEIIKQDVNS 177
Query: 199 SARHFNTIQKYKHI 212
+ FN + K I
Sbjct: 178 AMNKFNGFKANKSI 191
>gi|294496924|ref|YP_003560624.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
gi|384049328|ref|YP_005497345.1| peptidyl-tRNA hydrolase [Bacillus megaterium WSH-002]
gi|294346861|gb|ADE67190.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
gi|345447019|gb|AEN92036.1| Peptidyl-tRNA hydrolase [Bacillus megaterium WSH-002]
Length = 185
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GF ID AE IS++ +G G + V+L KP
Sbjct: 3 LIVGLGNPGKEYDRTRHN-IGFMAIDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL Y+ + + +LV +DD+ LPCG +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGESIRPLMDYFDIDVEDLLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ +EF R+RIGI RP M ++L +F ++ A++ V + L K E
Sbjct: 122 K-TQEFNRIRIGIDRPKNGMKVVDYVLGRFTEDEMVHMEEAMKTSVHASEDFLGKTFLEV 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNRYN 185
>gi|225575739|ref|ZP_03784349.1| hypothetical protein RUMHYD_03832 [Blautia hydrogenotrophica DSM
10507]
gi|225037036|gb|EEG47282.1| aminoacyl-tRNA hydrolase [Blautia hydrogenotrophica DSM 10507]
Length = 194
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG +Y+ TRHN +GF+ +D E + + V CK +G+G + V+L K
Sbjct: 2 YLIAGLGNPGRQYEHTRHN-IGFDTVDVLVEEYQVPQSGVRCKGMYGKGMIAGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P TYMNLSGES +A Y+K+ P ++++V +DD+ L G +R+R G GGHNG+K ++
Sbjct: 61 PLTYMNLSGESVRGIADYFKIDPESQLIVIYDDIDLEPGQIRIRKKGSAGGHNGIKDIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G + F R++IG+G P D +L +F+ RE ID A+ +K +L+ G+
Sbjct: 121 KL-GTQNFIRIKIGVGAKPRGWDLADHVLSRFSKEERELIDMAVSRAAAAVKKILTDGVD 179
Query: 198 ESARHFNTIQ 207
+ +N Q
Sbjct: 180 AAMNEYNRKQ 189
>gi|291561351|emb|CBL40150.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SS3/4]
Length = 191
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y+ TRHN GF ++DA AE G ++ KA G+G +G V+L KP
Sbjct: 3 IIAGLGNPGKEYENTRHN-AGFMVMDALAEKIGADISEKKHKALCGKGVIGGEKVILMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGES A YYK+ +L+ +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 62 QTYMNSSGESIRAAADYYKVDPEDILIVYDDISLAPGQLRIRAKGSAGGHNGIKSIIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+++G+G P +MD ++L F+ + +D A++E + + +++ G+ ++
Sbjct: 122 -GTQEFPRVKVGVGEKPSRMDLADYVLGHFSKEEQATMDEAVKEAADAVCEIVNVGIAQA 180
Query: 200 ARHFNTIQKYK 210
N ++ K
Sbjct: 181 MNDHNRKKEEK 191
>gi|188588535|ref|YP_001919597.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
gi|238689626|sp|B2UXS9.1|PTH_CLOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188498816|gb|ACD51952.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
Length = 191
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 4/194 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG KY TRHN +GFE+ID + I +N K +G+GF+ + V+L K
Sbjct: 2 FLIVGLGNPGSKYDNTRHN-IGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S +A +YK+ ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+++G+G+P + ++L KF+ +E + +++ ++ ++ + +
Sbjct: 121 LSTDV-FPRIKVGVGQPNDNL--VDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINS 177
Query: 199 SARHFNTIQKYKHI 212
+ FN + K I
Sbjct: 178 AMNKFNGFKANKSI 191
>gi|167758783|ref|ZP_02430910.1| hypothetical protein CLOSCI_01125 [Clostridium scindens ATCC 35704]
gi|336421857|ref|ZP_08602012.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_57FAA]
gi|167663523|gb|EDS07653.1| aminoacyl-tRNA hydrolase [Clostridium scindens ATCC 35704]
gi|336009706|gb|EGN39697.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 194
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 115/187 (61%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+GTRHN GF++ID A IS++ +A G+G + V+LAK
Sbjct: 2 FIIAGLGNPTLQYEGTRHN-AGFDVIDTLAGKYNISVDGRKNRALIGKGIIEGKKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES G L YYK+ + LV +DD+ L G LR+R G GGHNG+K++++
Sbjct: 61 PQTYMNLSGESLGGLVDYYKVDEESEFLVVYDDISLDVGQLRIRKKGSAGGHNGMKNIIS 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G F R+++G+G P + D ++L +F+ R ++ Q+ VE ++++L +
Sbjct: 121 HL-GTEVFPRIKVGVGEKPKKYDLADYVLSRFSKEERAIMEEGCQKAVEAVEMILRGEME 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 EAMNKFN 186
>gi|148381480|ref|YP_001256021.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|153931979|ref|YP_001385855.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|153936610|ref|YP_001389262.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
gi|166199325|sp|A7FPJ7.1|PTH_CLOB1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199326|sp|A5I7R5.1|PTH_CLOBH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148290964|emb|CAL85100.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|152928023|gb|ABS33523.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|152932524|gb|ABS38023.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
Length = 189
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|325265260|ref|ZP_08131985.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
gi|324029439|gb|EGB90729.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
Length = 192
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 117/191 (61%), Gaps = 3/191 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+GTRHN VGFE+ID A I+++T +A G+G +G V+LAK
Sbjct: 2 YIIAGLGNPDRQYEGTRHN-VGFEVIDTIASKYNIAVDTKKHRAFIGKGVIGGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYK+ + ++V +DD+ L G LR+R G GGHNG+K++++
Sbjct: 61 PQTYMNLSGESIISLVEYYKIDEEQELIVIYDDVSLGVGQLRIRAKGSAGGHNGIKNIIS 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+ F R+++G+G P + D ++L F E ++ + V +++++S +
Sbjct: 121 HL-GSEVFPRIKVGVGEKPPKYDLADYVLGHFTKAEHELMEAGYENAVHAVEMIISGEIQ 179
Query: 198 ESARHFNTIQK 208
+ +N +K
Sbjct: 180 AAMNEYNRKKK 190
>gi|56418581|ref|YP_145899.1| peptidyl-tRNA hydrolase [Geobacillus kaustophilus HTA426]
gi|375006854|ref|YP_004980483.1| peptidyl-tRNA hydrolase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448236355|ref|YP_007400413.1| peptidyl-tRNA hydrolase [Geobacillus sp. GHH01]
gi|68052880|sp|Q5L3U7.1|PTH_GEOKA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56378423|dbj|BAD74331.1| stage V sporulation protein C (peptidyl-tRNA hydrolase)
[Geobacillus kaustophilus HTA426]
gi|359285699|gb|AEV17383.1| Peptidyl-tRNA hydrolase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445205197|gb|AGE20662.1| peptidyl-tRNA hydrolase [Geobacillus sp. GHH01]
Length = 186
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN VGF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHN-VGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 62 LTYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRP G ++L +F + +D A+ + + + +
Sbjct: 122 -GTEQFKRIRIGIGRPAGGQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNDFN 185
>gi|251779900|ref|ZP_04822820.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084215|gb|EES50105.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 191
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 4/194 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG KY TRHN +GFE+ID + I +N K +G+GF+ + V+L K
Sbjct: 2 FLIVGLGNPGSKYDNTRHN-IGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S +A +YK+ ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+++G+G+P + ++L KF+ +E + +++ ++ ++ + +
Sbjct: 121 LSTDV-FPRIKVGVGQPNDNL--VDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDVNS 177
Query: 199 SARHFNTIQKYKHI 212
+ FN + K I
Sbjct: 178 AMNKFNGFKANKSI 191
>gi|424835857|ref|ZP_18260516.1| peptidyl-tRNA hydrolase [Clostridium sporogenes PA 3679]
gi|365977727|gb|EHN13825.1| peptidyl-tRNA hydrolase [Clostridium sporogenes PA 3679]
Length = 189
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G++YK TRHN +GF+ ID +E I +N K ++G+G +G+ V+L K
Sbjct: 2 YLVVGLGNIGEEYKKTRHN-IGFDAIDIISEKYNIKINRQKFKGSYGEGRIGNEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAVNFYKINKENIIVIYDDMSIDIGKLRIRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P G + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDGNV--VNYVLGKFSKEQREIIEKTLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|210623287|ref|ZP_03293704.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
gi|210153688|gb|EEA84694.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
Length = 186
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY TRHN GFE+ID A+ GIS+ + KA G+G VG V+L K
Sbjct: 2 YIIVGLGNPGQKYAKTRHN-AGFEVIDRLADEYGISVTKIKHKALIGEGRVGTEKVVLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES L +YK L++++V +DD+ L G LR+R G G HNG++S+
Sbjct: 61 PTTYMNLSGESVVSLYQFYKPDLDKLIVIYDDIDLDVGKLRIRKKGSPGTHNGMRSITQC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G ++F R R+G+G+P D F+L + E ++ ++ + + ++ +G+
Sbjct: 121 L-GTKDFPRFRVGVGKPDKGRDLADFVLSRVPKEQDEAMNEGFEKTAKAIDSMIREGIDM 179
Query: 199 SARHFN 204
+ +N
Sbjct: 180 AMNKYN 185
>gi|297528421|ref|YP_003669696.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
gi|297251673|gb|ADI25119.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
Length = 186
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG++Y+ TRHN VGF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGEEYEQTRHN-VGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 62 LTYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRP G ++L +F + +D A+ + + +
Sbjct: 122 -GTEQFKRIRIGIGRPTGGQPVTDYVLGRFTEEEKPAVDKAVLRAANACEQAVKAPFIQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNDFN 185
>gi|374987105|ref|YP_004962600.1| peptidyl-tRNA hydrolase [Streptomyces bingchenggensis BCW-1]
gi|297157757|gb|ADI07469.1| peptidyl-tRNA hydrolase [Streptomyces bingchenggensis BCW-1]
Length = 196
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 116/199 (58%), Gaps = 10/199 (5%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA 72
T A PWL VGLGNPG +Y RHN VGF + D A+ +A +G VG A
Sbjct: 2 TDEASPWLVVGLGNPGPEYAANRHN-VGFMVADLLADRMRGRFKAHKSRAQVVEGRVG-A 59
Query: 73 P------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 126
P V++AKP ++MNLSG T L +YK+P+ V+ HD++ + G LRL+ GG
Sbjct: 60 PGPASRRVIVAKPMSFMNLSGGPTTALRDFYKVPVGHVIAVHDELDIDYGALRLKLGGGD 119
Query: 127 GGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
GHNGLKS+ + + ++ R+R GIGRPPG+MD AF+L+ F+A R+ +D + +
Sbjct: 120 NGHNGLKSITKSL--SPDYFRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAAD 177
Query: 187 VLKLLLSKGLTESARHFNT 205
++ L+ GL + +N+
Sbjct: 178 AVETLIVDGLERAQSTYNS 196
>gi|260584472|ref|ZP_05852219.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
gi|260157990|gb|EEW93059.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
Length = 186
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG KYKGTRHN +GF +D FA + + N ATF Q + V+L KP
Sbjct: 3 LIIGLGNPGAKYKGTRHN-IGFITVDEFAYQEKLEFNQALFDATFTQTHIDGEKVILMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSG++ PL Y+K+ + ++V +DDM LP G +RLR G GGHNG+KS+++
Sbjct: 62 LTYMNLSGQAVRPLMNYFKIGIEDIVVLYDDMDLPVGKIRLRQKGSAGGHNGIKSIISCL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
G+ +F R++IG+GRP +L F +E I +++ + VE L+
Sbjct: 122 -GSDQFNRIKIGVGRPAPGRSVVNHVLANFEKEEQEEILSSVSKSVEALR 170
>gi|387819821|ref|YP_005680168.1| peptidyl-tRNA hydrolase [Clostridium botulinum H04402 065]
gi|322807865|emb|CBZ05440.1| peptidyl-tRNA hydrolase [Clostridium botulinum H04402 065]
Length = 189
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLSMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|255281408|ref|ZP_05345963.1| aminoacyl-tRNA hydrolase [Bryantella formatexigens DSM 14469]
gi|255267896|gb|EET61101.1| aminoacyl-tRNA hydrolase [Marvinbryantia formatexigens DSM 14469]
Length = 191
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y TRHN VGF+ ID AE I + +A G G + VLL K
Sbjct: 2 YIIAGLGNPGRQYAHTRHN-VGFDTIDVLAEKYNIKVEYEKGRALTGSGRIEGQSVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLP-LNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P T+MNLSGES LA +YK+ ++++V +DD+ LP G LR+R G GGHNG+KS+++
Sbjct: 61 PLTFMNLSGESIRALADFYKIDGTSQLIVIYDDISLPPGQLRIREKGSAGGHNGIKSIIS 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G +EF R+++G+G P D ++L +F+ R++++ AL+ + L++ G+
Sbjct: 121 HL-GGQEFLRIKVGVGEKPAGWDLADYVLSRFSQEERQKVEEALKRAADAAVCLMTDGVE 179
Query: 198 ESARHFN 204
+ +N
Sbjct: 180 AAMNEYN 186
>gi|168187037|ref|ZP_02621672.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
gi|169295068|gb|EDS77201.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
Length = 190
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN VGF+++D +E I +N K +G G + V+L K
Sbjct: 2 FLIVGLGNPGKEYEHTRHN-VGFDIVDVISEKYNIDLNKKKFKGMYGSGIIAGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES +YK+P V+V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 PLTYMNLSGESVKEAMDFYKIPNENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
F G+ F R+++G+G+P Q D + +L KFN E + + + + ++ KG E
Sbjct: 121 F-GSDVFPRIKVGVGQPI-QKDLVSHVLGKFNIEDVEILSKVFEAANDATESIIEKGTAE 178
Query: 199 SARHFN 204
+ FN
Sbjct: 179 AMNKFN 184
>gi|160878271|ref|YP_001557239.1| aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
gi|189038285|sp|A9KR32.1|PTH_CLOPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160426937|gb|ABX40500.1| Aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
Length = 191
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ +GLGNP +Y+ TRHN +GF+ I A+ IS++T KA G+G +G V+LAK
Sbjct: 2 YIIIGLGNPTREYEATRHN-IGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES L +YK+ ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 61 PQTYMNLSGESVRELIDFYKVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ EF R++IG+G P D ++L +F I AL++ + + +L G
Sbjct: 121 L-GSDEFCRIKIGVGDKPKNWDLADYVLARFPKEEEPAIREALEKVSKACETILRDGAKV 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 AMNLFN 185
>gi|449092766|ref|YP_007425257.1| peptidyl-tRNA hydrolase [Bacillus subtilis XF-1]
gi|449026681|gb|AGE61920.1| peptidyl-tRNA hydrolase [Bacillus subtilis XF-1]
Length = 188
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHN-VGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I+ A+ + V+ + LSK E
Sbjct: 122 -GTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEGAVDKSVKACEASLSKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|304315713|ref|YP_003850858.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433653904|ref|YP_007297612.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777215|gb|ADL67774.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292093|gb|AGB17915.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 190
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG +Y+GTRHN +GF++ID +E I++ + K+ G+G + V+L K
Sbjct: 2 YIIVGLGNPGREYEGTRHN-MGFDVIDDLSEKLNIAVKKLRFKSLIGEGIYKEEKVILQK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMN SGE+ + +YKLPL+ ++V +DD L G +R+R G GGHNG+KS++
Sbjct: 61 PQTYMNSSGEAVYDIVNFYKLPLSNLIVVYDDKDLDVGKIRIRKKGSSGGHNGMKSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +F R+R+GIG+P G M +L +FN + +D ++ + + ++ G+
Sbjct: 120 LLNSEDFPRVRVGIGKPKGDM--IEHVLGRFNESDKTIVDNSIDRAADAIIDIIENGVEH 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMNLFN 183
>gi|259047961|ref|ZP_05738362.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
gi|259035381|gb|EEW36636.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
Length = 203
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KYKGTRHN VGF +D A + + A F QG +G V+ KP
Sbjct: 20 LVVGLGNPGAKYKGTRHN-VGFMTMDEVAYQEKFDFDKALFDAVFAQGQMGGEKVIFMKP 78
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSGE+ PL YYK+ + +LV +DDM LP G +RLR G GGHNG+KS+++
Sbjct: 79 LTFMNLSGEAIRPLMNYYKIGIEDLLVVYDDMDLPVGKIRLRQKGSAGGHNGMKSIISCL 138
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTE 198
G EF R+++G+GRP +L +F E I A+Q+ V+ ++ + + +
Sbjct: 139 -GTSEFNRIKVGVGRPKEGRTVVGHVLNRFEKEEEEDIIFAVQKSVDAIRSWIDTDDFVK 197
Query: 199 SARHFN 204
+ FN
Sbjct: 198 TMNQFN 203
>gi|145222528|ref|YP_001133206.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315442976|ref|YP_004075855.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum Spyr1]
gi|189038156|sp|A4T6N5.1|PTH_MYCGI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145215014|gb|ABP44418.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315261279|gb|ADT98020.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum Spyr1]
Length = 192
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 119/198 (60%), Gaps = 8/198 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN +GF + D A+ G + VH K A G +
Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHN-IGFMVADVLADRMGETFK-VHKKSGAEVTTGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKP+ YMN SG GPLA +Y + V++ HD++ + G +RL+ GG GHNGL
Sbjct: 59 PVVLAKPRVYMNESGRQVGPLAKFYSIAPTDVVIIHDELDIDFGRIRLKAGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + N +F R+R+GIGRPPGQ +F+L+ FN+ R + T +++ + +LL+
Sbjct: 119 RSVGSALSTN-DFQRVRVGIGRPPGQKSGASFVLEPFNSRERPELGTIIEQAADATELLI 177
Query: 193 SKGLTESARHFNTIQKYK 210
G+ E A+ NT+ +
Sbjct: 178 ELGI-EPAQ--NTVHAWS 192
>gi|168181009|ref|ZP_02615673.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226950996|ref|YP_002806087.1| peptidyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
gi|421834409|ref|ZP_16269460.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001627]
gi|254783862|sp|C1FNE6.1|PTH_CLOBJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182668160|gb|EDT80139.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226842368|gb|ACO85034.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
gi|409744196|gb|EKN42857.1| peptidyl-tRNA hydrolase [Clostridium botulinum CFSAN001627]
Length = 189
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|398817464|ref|ZP_10576082.1| peptidyl-tRNA hydrolase [Brevibacillus sp. BC25]
gi|398030018|gb|EJL23458.1| peptidyl-tRNA hydrolase [Brevibacillus sp. BC25]
Length = 189
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G + VLL KP
Sbjct: 3 VIIGLGNPGKKYEDTRHN-AGFMAIDKISDKWGIPVTQNKFRALVGEGRIEADKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGES + +YKL + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 QTYMNLSGESVAEVLKFYKLIPDDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+++GI RP ++L F R I A+ + + + +
Sbjct: 122 -GTQEFKRIKVGISRPESGRSVSDYVLNTFPVAERADIQEAVSLAADACAMWTRESFLKV 180
Query: 200 ARHFNTIQK 208
H+N+++K
Sbjct: 181 MNHYNSLKK 189
>gi|226309688|ref|YP_002769582.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
gi|254783855|sp|C0ZHD7.1|PTH_BREBN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226092636|dbj|BAH41078.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
Length = 189
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G + VLL KP
Sbjct: 3 VIIGLGNPGKKYEDTRHN-AGFMAIDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGES + +YKL + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 QTYMNLSGESVAEVLKFYKLIPDDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+++GI RP ++L F R I A+ + + + +
Sbjct: 122 -GTQEFKRIKVGISRPEPGRSVSDYVLNTFPVAERADIQEAVSLAADACAMWTRESFLKV 180
Query: 200 ARHFNTIQK 208
HFN+++K
Sbjct: 181 MNHFNSLKK 189
>gi|295702291|ref|YP_003595366.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
gi|294799950|gb|ADF37016.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
Length = 185
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GF ID AE IS++ +G G + V+L KP
Sbjct: 3 LIVGLGNPGKEYDRTRHN-IGFMAIDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL Y+ + + +LV +DD+ LPCG +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGESIRPLMDYFDIDVKDLLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ +EF R+RIGI RP M ++L +F ++ A++ + + L K E
Sbjct: 122 K-TQEFNRIRIGIDRPKNGMKVVDYVLGRFTEDEMVHMEEAMKTSIHASEDFLGKPFLEV 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNRYN 185
>gi|134297988|ref|YP_001111484.1| aminoacyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
gi|172044208|sp|A4J0Q6.1|PTH_DESRM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134050688|gb|ABO48659.1| peptidyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
Length = 206
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 7/182 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GF +ID A+ +S KA Q +G V+LAKP
Sbjct: 3 LIVGLGNPGTEYAKTRHN-IGFMVIDRLADESRVSTEKNQHKAQICQITIGSEKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG+S L +YKL + + V DDM LP GVLR+R NG GG GLK+++
Sbjct: 62 QTYMNLSGQSVVALMNWYKLSPDELFVITDDMDLPPGVLRIRKNGSAGGQRGLKNII-EL 120
Query: 140 RGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G ++F R+R+GIGRP G +D +L K + E I+ A+Q VE +K+ + +G T+
Sbjct: 121 LGTQQFPRMRVGIGRPEHGAVD---HVLGKISEAEAELINPAIQTAVEAVKVWVLEG-TQ 176
Query: 199 SA 200
+A
Sbjct: 177 AA 178
>gi|170759071|ref|YP_001788880.1| peptidyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
gi|238688504|sp|B1KTE2.1|PTH_CLOBM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169406060|gb|ACA54471.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
Length = 189
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDQREVIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|153940404|ref|YP_001392894.1| peptidyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|384463854|ref|YP_005676449.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. 230613]
gi|166199327|sp|A7GJD4.1|PTH_CLOBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152936300|gb|ABS41798.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|295320871|gb|ADG01249.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. 230613]
Length = 189
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|424779781|ref|ZP_18206673.1| Peptidyl-tRNA hydrolase [Catellicoccus marimammalium M35/04/3]
gi|422843531|gb|EKU27961.1| Peptidyl-tRNA hydrolase [Catellicoccus marimammalium M35/04/3]
Length = 193
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 104/170 (61%), Gaps = 3/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGN G +Y+GTRHN +GF ++D A+ +GIS ++ K +LL K
Sbjct: 3 LIVGLGNIGTEYEGTRHN-IGFMVLDELAKKKGISFHSDRAFKGEIASFSEQGEKILLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +YK+PL +++ HDD+ LPCG LR R +G GGHNGLKS+ N
Sbjct: 62 PSTYMNLSGESVRAVVDFYKIPLEDIMIVHDDLDLPCGSLRFRASGSAGGHNGLKSIFQN 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
G ++F RL+IGIGRP +L F+ R I+ A+Q GVE L
Sbjct: 122 C-GTQKFLRLKIGIGRPHPGKTVVYHVLHPFSKEERMEIEFAIQNGVEAL 170
>gi|387131036|ref|YP_006293926.1| peptidyl-tRNA hydrolase [Methylophaga sp. JAM7]
gi|386272325|gb|AFJ03239.1| Peptidyl-tRNA hydrolase [Methylophaga sp. JAM7]
Length = 191
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 109/184 (59%), Gaps = 6/184 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLA 77
W+ VGLGNPG +Y+ TRHN VGF M+D FAE G+S T + + Q + A L
Sbjct: 4 WIIVGLGNPGSQYEHTRHN-VGFWMLDQFAEQAGLSFKTDNRFQGELVQQIMPQAKFWLL 62
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP T+MN SG+S LA +YK+P R++V HD++ LP G +RL+ +GGHGGHNGL+ ++
Sbjct: 63 KPLTFMNRSGQSVAALANFYKIPPERIVVLHDELDLPTGTVRLKKSGGHGGHNGLRDIIA 122
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARER----IDTALQEGVEVLKLLLS 193
G ++F R RIGIG P ++L + + R++ ID A+Q +V L
Sbjct: 123 QLGGQKDFLRCRIGIGHPGNSRQVSDYVLSRPSPDDRQQIMHGIDAAIQALPDVFNNQLD 182
Query: 194 KGLT 197
K +
Sbjct: 183 KAMN 186
>gi|168183620|ref|ZP_02618284.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|237797001|ref|YP_002864553.1| peptidyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
gi|259535145|sp|C3KW96.1|PTH_CLOB6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182673238|gb|EDT85199.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|229262516|gb|ACQ53549.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
Length = 189
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKQTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>gi|302342166|ref|YP_003806695.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
gi|301638779|gb|ADK84101.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
Length = 200
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 115/195 (58%), Gaps = 2/195 (1%)
Query: 10 GFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV 69
G A A+ L VGLGNPG +Y TRHN GF +++ A G+ + ++ +G+G V
Sbjct: 3 GRARAEAQTALVVGLGNPGPRYATTRHN-AGFMVVEELARRHGVGLVKSGHQSIWGKGLV 61
Query: 70 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
PV+ A PQTYMNLSGE+ L +YY+LP +++V HDD+ L G L++ GG GH
Sbjct: 62 EGRPVIAALPQTYMNLSGEAVAALLSYYRLPPTQLVVAHDDLDLELGRLKVAARGGAAGH 121
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
G+ S++ + G EFARLR G+GRP + F+L F A RE +Q + L+
Sbjct: 122 KGVGSII-SLLGTDEFARLRFGVGRPRHDEPIEQFVLNGFYADQRELGQKMVQVAADCLE 180
Query: 190 LLLSKGLTESARHFN 204
++L KGL E+ + F+
Sbjct: 181 VILGKGLAEAMQRFH 195
>gi|398785298|ref|ZP_10548322.1| peptidyl-tRNA hydrolase [Streptomyces auratus AGR0001]
gi|396994564|gb|EJJ05598.1| peptidyl-tRNA hydrolase [Streptomyces auratus AGR0001]
Length = 195
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 112/196 (57%), Gaps = 10/196 (5%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP-- 73
A PWL VGLGNPG +Y G RHN VGF + D AE G +A +G G AP
Sbjct: 4 ADPWLVVGLGNPGPEYAGNRHN-VGFMVADLLAERMGGRFKAHKARAQVVEGRCG-APGP 61
Query: 74 ----VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
V++AKP +YMN+SG T L +YK+P+ ++ HD++ + G LRL+ GG GH
Sbjct: 62 ESRRVVVAKPSSYMNVSGGPTTALRDFYKVPVANIIAIHDELDIDYGALRLKLGGGDNGH 121
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
NGLKS+ + E+ R+R GIGRPPG+M F+L+ F++ R +D + + ++
Sbjct: 122 NGLKSITKSL--GAEYHRVRFGIGRPPGRMQVADFVLKDFSSAERRELDYFVDRAADAVE 179
Query: 190 LLLSKGLTESARHFNT 205
L+ GL + +N+
Sbjct: 180 TLIVDGLERAQSTYNS 195
>gi|392417978|ref|YP_006454583.1| peptidyl-tRNA hydrolase [Mycobacterium chubuense NBB4]
gi|390617754|gb|AFM18904.1| peptidyl-tRNA hydrolase [Mycobacterium chubuense NBB4]
Length = 192
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 122/197 (61%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN +GF + D A+ G + VH K A G +G
Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHN-LGFLVADVLADRIGAAFK-VHKKSGAEVVTGRLGGK 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+TYMN SG GPLA +Y + ++V HD++ + G +RL+ GG GHNGL
Sbjct: 59 SVVLAKPRTYMNESGRQVGPLAKFYSVAPADIIVIHDELDIDFGRIRLKSGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + G+ +F R+RIGIGRPPG+ +F+L+ FN+ R + T +++ + +LL+
Sbjct: 119 RSVGSAL-GSNDFQRVRIGIGRPPGRQSGASFVLENFNSRERPELGTIVEQAADATELLI 177
Query: 193 SKGLTESARHFNTIQKY 209
+ G+ E A+ NT+ +
Sbjct: 178 AHGI-EPAQ--NTVHAW 191
>gi|28209961|ref|NP_780905.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
gi|46576800|sp|Q899I4.1|PTH_CLOTE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28202396|gb|AAO34842.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
Length = 188
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GFE +D + I + K FG G + + V+L K
Sbjct: 2 FLLVGLGNPGKEYEKTRHN-IGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + YY +P+ V+V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PTTYMNLSGESLREIIEYYNIPITNVIVIYDDVDLEVGRLRIRTKGSAGGHNGIKSIIYN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +F RLRIG+G+P Q D + +L KF + I+ L+ E+ ++++G E
Sbjct: 121 L-NSEDFIRLRIGVGKP--QRDMVSHVLGKFAKEDEKNIEEVLKIIPELAYTIINQGPQE 177
Query: 199 SARHFNT 205
+ +N
Sbjct: 178 AMNKYNN 184
>gi|225387032|ref|ZP_03756796.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
gi|225046850|gb|EEG57096.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
Length = 212
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+ TRHN VGFE+ID A+ S++ K +G+ +G V+L K
Sbjct: 23 YIIAGLGNPTKEYEKTRHN-VGFEVIDVLADRLFTSVDEKKFKGYYGKAVIGGEKVILLK 81
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES A +YK+ + ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 82 PQTFMNLSGESVRAAADFYKVDPDHIIVVYDDVSLDVGQLRIRTKGSAGGHNGIKNIIAH 141
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+++G+G P +MD ++L +F R ++ A +E E +++++ +G
Sbjct: 142 L-GTQEFPRIKVGVGNKPPRMDLADYVLGRFPREERGLMEDAFKEAAEAVEVMIQEGAGT 200
Query: 199 SARHFN 204
+ FN
Sbjct: 201 AMNRFN 206
>gi|404421907|ref|ZP_11003612.1| peptidyl-tRNA hydrolase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403658493|gb|EJZ13221.1| peptidyl-tRNA hydrolase [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 191
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 125/197 (63%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN VGF + D A G S VH K A G + A
Sbjct: 1 MAEPLLVVGLGNPGPAYAKTRHN-VGFMVADILAARIG-SAFKVHKKSGAEVITGRLAGA 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKP+ YMN SG GPLA +Y +P R++V HD++ + G +RL+ GG GGHNGL
Sbjct: 59 PVVLAKPRCYMNESGRQVGPLAKFYSVPPGRIVVIHDELDIDFGRIRLKVGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + G+++F R+RIG+GRPPG+ DP AF+L+ F A R + T ++ + +LL+
Sbjct: 119 RSVASAL-GSKDFQRVRIGVGRPPGRKDPAAFVLEAFTAAERTELPTICEQAADATELLI 177
Query: 193 SKGLTESARHFNTIQKY 209
++GL E A+ NT+ +
Sbjct: 178 AQGL-EPAQ--NTVHAW 191
>gi|302542982|ref|ZP_07295324.1| aminoacyl-tRNA hydrolase [Streptomyces hygroscopicus ATCC 53653]
gi|302460600|gb|EFL23693.1| aminoacyl-tRNA hydrolase [Streptomyces himastatinicus ATCC 53653]
Length = 198
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 8/196 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG---- 70
+ PWL VGLGNPG +Y RHN VGF + + AE G +A +G +G
Sbjct: 6 ASSPWLVVGLGNPGPEYAANRHN-VGFMVAELLAERMGGRFKAHKSRAQVVEGRIGPPGP 64
Query: 71 -DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
V++AKP ++MNLSG T L +YK+P + V+ HD++ + G LRL+ GG GH
Sbjct: 65 GSRRVIVAKPMSFMNLSGGPTTALRDFYKVPTSHVIAIHDELDIDYGALRLKLGGGDNGH 124
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
NGLKS+ + G ++ R+R GIGRPPG+MD AF+L+ F+A R +D + + ++
Sbjct: 125 NGLKSITKS--GGPDYFRIRFGIGRPPGRMDVAAFVLKDFSAAERRELDYFVDRAADAVE 182
Query: 190 LLLSKGLTESARHFNT 205
L+ GL + +N+
Sbjct: 183 TLIVDGLERAQGTYNS 198
>gi|334564775|ref|ZP_08517766.1| hypothetical protein CbovD2_09386 [Corynebacterium bovis DSM 20582]
Length = 218
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 27/211 (12%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAF---------AESQGISMNTVHCKATF--- 64
RPWL VGLGNPG+KY TRHN VG+ ++D + Q N++ C+
Sbjct: 10 RPWLIVGLGNPGEKYAATRHN-VGYMVVDEILGDILPVPGSLKQHKRTNSLICETRVTAS 68
Query: 65 --------GQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCG 116
PV+LA+ + YMNLSG + G LA+++++P +V+V HD++ L G
Sbjct: 69 ASGRAAGSAASAGDGVPVVLARSRGYMNLSGGAVGALASFFRVPPAQVVVVHDELDLDPG 128
Query: 117 VLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARER 176
V+R++ GG GHNGLKS G R++ R+R+GIGRPPG+MDP A++L+ F +
Sbjct: 129 VVRVKLGGGENGHNGLKSTTQAL-GTRDYVRVRVGIGRPPGRMDPAAYVLKPFTRAELDD 187
Query: 177 IDTALQEGVEVLKLLLSKGLTES-----ARH 202
+ + + + ++L++++G+ + ARH
Sbjct: 188 LPVTVADAADAVRLVVTRGVEAAQNEIHARH 218
>gi|399888053|ref|ZP_10773930.1| peptidyl-tRNA hydrolase [Clostridium arbusti SL206]
Length = 187
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 116/188 (61%), Gaps = 4/188 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN VGF+++D ++ I+MN K +G G + D V+L KP
Sbjct: 3 LIVGLGNPGKEYEKTRHN-VGFDILDLISDKYNINMNRTKFKGVYGDGKIDDERVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSGES + +YK+ ++V +DD+ L G +R+R +G GGHNG+K++++N
Sbjct: 62 ATFMNLSGESVKAVCDFYKIKNENIIVIYDDISLSVGRMRIRKSGSAGGHNGIKNIISNL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ F R+++G+G P G D + +L +F+ R ++ + ++ +++KG E+
Sbjct: 122 SSDV-FPRVKVGVGAPIG--DLISHVLGRFSTEDRIEVEKVFNVAADAVQCIITKGTCEA 178
Query: 200 ARHFNTIQ 207
+FN I+
Sbjct: 179 MNNFNGIK 186
>gi|357014640|ref|ZP_09079639.1| Pth [Paenibacillus elgii B69]
Length = 186
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W FVGLGNPG +Y+ TRHN +GF +D FA+ GI + CK G+G V V L K
Sbjct: 3 W-FVGLGNPGRQYEATRHN-IGFMALDRFADKHGIKITQSKCKGLLGEGHVAGQKVYLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES +YK + ++V +DD+ P G +RLR+ G GGHNG+KS + +
Sbjct: 61 PQTYMNLSGESIRAFMDFYKAAIEDLIVIYDDLDTPYGQIRLRYQGSAGGHNGIKSAIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP D ++L F+ +++ L + V+ ++ +L +
Sbjct: 121 L-GTQSFQRIRMGISRPAPGRDIADYVLSTFSKEEFQQMPGLLDKTVDAMEHILEHPFEK 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|406982008|gb|EKE03381.1| Peptidyl-tRNA hydrolase [uncultured bacterium]
Length = 198
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
+ VGLGNPGDKYK TRHN VGF + A I+ + K + G+G + D VL+
Sbjct: 3 IIVGLGNPGDKYKETRHN-VGFMVTGELASKHNIA-GKIDAKFNSIIGKGVINDKEVLIV 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P TYMNLSG++ + +YK+ R+LV DD+ L G +R R +G GGHNG++S+++
Sbjct: 61 QPLTYMNLSGQAISKVLNWYKIEPTRLLVVFDDVSLEIGRIRFRPSGSDGGHNGIRSIID 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
N G ++F+RL+IGIG PG K ++LQKF + ID + +E ++ L +G+
Sbjct: 121 NLGGFKDFSRLKIGIGPDPGSDIRKTYVLQKFTKPEKNIIDKVVPVCIEGIEYYLKEGIE 180
Query: 198 ESARHFN 204
++ +N
Sbjct: 181 KAQNKYN 187
>gi|121534877|ref|ZP_01666696.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
gi|121306476|gb|EAX47399.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
Length = 185
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN VGF ++D A G+S +A + + G VLL KP
Sbjct: 3 VIVGLGNPGREYSATRHN-VGFMVVDELARRWGVSDWRRRHEAEVAE-YRGAEAVLLVKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG + G +A +YKL ++V DD+ LP G LRLR G GGH G++S++
Sbjct: 61 QTYMNLSGRAVGEIARWYKLAAEDIIVVFDDLDLPVGRLRLRMKGSSGGHRGIESILAQL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G FAR+R+GIGRPP ++L KF I+ A+ + ++ +L GL ++
Sbjct: 121 -GADTFARVRVGIGRPPQGWATADYVLSKFTPDEAPLIEQAIVRAADAVETILKDGLNKA 179
Query: 200 ARHFN 204
FN
Sbjct: 180 MNAFN 184
>gi|172056087|ref|YP_001812547.1| peptidyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
gi|229576703|sp|B1YGP7.1|PTH_EXIS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171988608|gb|ACB59530.1| Aminoacyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
Length = 185
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY TRHN +GF IDA A+ GI + KA FG G + V+L KP
Sbjct: 4 IVGLGNPGAKYTNTRHN-IGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE+ PL +YK+ + VLV +DD+ LP +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 187
G ++ RL++G+GRPP + ++L F + + L + V +
Sbjct: 122 GTQDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQTTLQHVLSDSVNI 168
>gi|154496045|ref|ZP_02034741.1| hypothetical protein BACCAP_00329 [Bacteroides capillosus ATCC
29799]
gi|150274600|gb|EDN01664.1| aminoacyl-tRNA hydrolase [Pseudoflavonifractor capillosus ATCC
29799]
Length = 196
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL V LGNPGDKY+ TRHN VGF + D AE + I + + KA +G A VLL K
Sbjct: 12 WLVVCLGNPGDKYENTRHN-VGFMVADELAERKNIPVQRLKFKALTNTTQLGGAQVLLMK 70
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ A +YK+ + VLV DD+ LP G LR+R +G GGHNGLK+++
Sbjct: 71 PVTYMNLSGEAVRQAADFYKVSPDHVLVVSDDVSLPVGRLRIRKSGSAGGHNGLKNIIQQ 130
Query: 139 FRGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F RL++G+G +P D ++L KF ++ ID A++ + ++ + G
Sbjct: 131 L-GTDQFPRLKVGVGEKPHPDYDLADWVLGKFVGEDKKTIDAAIKRAADAVECYIQDGPD 189
Query: 198 ESARHFN 204
++ FN
Sbjct: 190 KAMSRFN 196
>gi|398309138|ref|ZP_10512612.1| peptidyl-tRNA hydrolase [Bacillus mojavensis RO-H-1]
Length = 188
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHN-VGFMAIDQLSKEWNIELNQSKFNGLYGTGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLMDYYDVDNEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F+ I+ A++ V+ + LSK E
Sbjct: 122 -GTPEFDRIRIGIGRPVNGMKVVDYVLGAFSKDEAPAIEEAIERSVKACEASLSKPFLEV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNEFNA 186
>gi|383819051|ref|ZP_09974330.1| peptidyl-tRNA hydrolase [Mycobacterium phlei RIVM601174]
gi|383337847|gb|EID16222.1| peptidyl-tRNA hydrolase [Mycobacterium phlei RIVM601174]
Length = 192
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN +GF + D A+ G S VH K A G +
Sbjct: 1 MAEPLLVVGLGNPGAQYATTRHN-LGFLVADILADRIG-SGFKVHKKSGAEVVTGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+TYMN SG GPLA +Y +P V+V HD++ + G +RL+ GG GHNGL
Sbjct: 59 SVVLAKPRTYMNESGRQVGPLAKFYSVPPADVIVIHDELDIDFGRIRLKFGGGIAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV G +F R+R+GIG+PPG+M+ F+L F A + + T Q+ + ++LL+
Sbjct: 119 RSVGAAL-GTNDFHRVRVGIGKPPGRMEGAKFVLSTFTAAEWKEVPTICQQAADAVELLI 177
Query: 193 SKGL 196
S+GL
Sbjct: 178 SQGL 181
>gi|345020768|ref|ZP_08784381.1| peptidyl-tRNA hydrolase [Ornithinibacillus scapharcae TW25]
Length = 186
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY+ TRHN +GF +ID + ++ K + + VLL +PQ
Sbjct: 4 IVGLGNPGKKYQSTRHN-IGFMVIDELLSRHNLKLDKDKFKGKYTIATIHGEKVLLLEPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGES PL YY + + VLV +D++ LP G +RLR GGHGGHNG++S++ +
Sbjct: 63 TYMNLSGESLRPLMDYYDVAVEDVLVVYDELDLPTGKIRLRQKGGHGGHNGIRSIITHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G ++F R+R+G+GRP + ++L F +E + ++ + + + L K +
Sbjct: 122 GTKDFKRIRLGVGRPTSSIPVVDYVLGDFAKAEQELVQESIAKAADACENWLEKSFDKVM 181
Query: 201 RHFN 204
FN
Sbjct: 182 NDFN 185
>gi|18311467|ref|NP_563401.1| peptidyl-tRNA hydrolase [Clostridium perfringens str. 13]
gi|110798942|ref|YP_697173.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|168205745|ref|ZP_02631750.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|168209723|ref|ZP_02635348.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|168213409|ref|ZP_02639034.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|168217602|ref|ZP_02643227.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
gi|169343257|ref|ZP_02864268.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|182624327|ref|ZP_02952112.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|422347550|ref|ZP_16428461.1| peptidyl-tRNA hydrolase [Clostridium perfringens WAL-14572]
gi|422875430|ref|ZP_16921915.1| peptidyl-tRNA hydrolase [Clostridium perfringens F262]
gi|21263844|sp|Q8XHJ8.1|PTH_CLOPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390927|sp|Q0TMG7.1|PTH_CLOP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|18146151|dbj|BAB82191.1| stage V sporulation protein C [Clostridium perfringens str. 13]
gi|110673589|gb|ABG82576.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|169298555|gb|EDS80636.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|170662744|gb|EDT15427.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|170712152|gb|EDT24334.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|170715077|gb|EDT27259.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|177910545|gb|EDT72918.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|182380300|gb|EDT77779.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
gi|373223820|gb|EHP46164.1| peptidyl-tRNA hydrolase [Clostridium perfringens WAL-14572]
gi|380303610|gb|EIA15911.1| peptidyl-tRNA hydrolase [Clostridium perfringens F262]
Length = 188
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF++ID A I +N K G+GF+ + V+L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHN-IGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES LA +YKL + ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 LTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G++ F R+++G+G+P + +L KF+ RE I+ + + + ++ ES
Sbjct: 122 GGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKES 178
Query: 200 ARHFNTI 206
FN +
Sbjct: 179 MNKFNGV 185
>gi|271969794|ref|YP_003343990.1| aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
gi|270512969|gb|ACZ91247.1| Aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
Length = 201
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 109/187 (58%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +Y G RHN GF ++D A G +A +G + AP +LAK
Sbjct: 7 WLVVGLGNPGPEYAGNRHN-AGFMVLDELAARAGGRFKVHRSRAEVLEGRLAGAPAVLAK 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P ++MNLSG LA +YK+ RV+ HD++ +P G LR + GG GHNGLKS+ +
Sbjct: 66 PLSFMNLSGGPVKALADFYKVDPARVIAVHDELDIPYGALRAKLGGGDNGHNGLKSITKS 125
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+++ R+R GIGRPPG+MD A++L+ F R+ + + ++++ L++ GL
Sbjct: 126 L-ATKDYLRVRFGIGRPPGRMDAAAYVLRDFATAERKDLPFLVDRAADMVESLITSGLEP 184
Query: 199 SARHFNT 205
+ F+
Sbjct: 185 TQNTFHA 191
>gi|392939895|ref|ZP_10305539.1| peptidyl-tRNA hydrolase [Thermoanaerobacter siderophilus SR4]
gi|392291645|gb|EIW00089.1| peptidyl-tRNA hydrolase [Thermoanaerobacter siderophilus SR4]
Length = 185
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 113/186 (60%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+GTRHN VGF +ID AE GI++ + K+ G+G+ V+L K
Sbjct: 2 YVISGLGNPGREYEGTRHN-VGFMVIDELAEKLGINVTKLKFKSLVGEGYFKGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT++N SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+KS++
Sbjct: 61 PQTFVNSSGEALYDAVNFYKIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMKSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ EF R+RIGIG+P Q D + +L KF ++ ID A+ + + + ++ G+
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMSKFN 183
>gi|433445433|ref|ZP_20409840.1| peptidyl-tRNA hydrolase [Anoxybacillus flavithermus TNO-09.006]
gi|432001081|gb|ELK21966.1| peptidyl-tRNA hydrolase [Anoxybacillus flavithermus TNO-09.006]
Length = 187
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN VGF +ID A G + N + F G + V+L KP
Sbjct: 4 LFVGLGNPGKEYEQTRHN-VGFMVIDELARRWGFTFNQTKFQGIFASGVISGEKVILCKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 63 LTYMNLSGECVRPLMDYYNIDVDDLIVIYDDLDLSTGTVRLRPKGSAGGHNGMKSLIHHL 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ +F R+RIGI RP M ++L ++ A + +I+ A+++ + + L +
Sbjct: 123 K-TEQFKRIRIGIDRPKNGMRVSDYVLGRWTAEEKIQIEQAIKKAADACERSLHVPFAQV 181
Query: 200 ARHFN 204
FN
Sbjct: 182 MNEFN 186
>gi|164688874|ref|ZP_02212902.1| hypothetical protein CLOBAR_02522 [Clostridium bartlettii DSM
16795]
gi|164602078|gb|EDQ95543.1| aminoacyl-tRNA hydrolase [Clostridium bartlettii DSM 16795]
Length = 183
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
Query: 22 VGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 81
+GLGNPGDKY+ TRHN VGF +ID A+ I ++ + KA G+G VG V+L KP T
Sbjct: 1 MGLGNPGDKYEKTRHN-VGFNVIDLLAKEYSIDVSKIKHKALIGEGRVGTEKVILVKPMT 59
Query: 82 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRG 141
YMNLSGES + YY + L ++V +DD+ L G +R+R G G HNG++S++ G
Sbjct: 60 YMNLSGESVADICNYYNIDLENLIVIYDDIDLDVGKIRIRKKGSGGTHNGMRSIIKCL-G 118
Query: 142 NREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 201
+ EF R+R+GI +P D F+L +F+ + + + + V + + L +
Sbjct: 119 SNEFPRVRVGISKPKNGQDLADFVLSRFSKEDEKSLQESFENSVAAVDCAIRNDLDLAMN 178
Query: 202 HFN 204
+N
Sbjct: 179 RYN 181
>gi|403389193|ref|ZP_10931250.1| peptidyl-tRNA hydrolase [Clostridium sp. JC122]
Length = 190
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPGDKY TRHN VGF++ID A I +N K +G+ + V+L K
Sbjct: 2 YLVVGLGNPGDKYDKTRHN-VGFDIIDLLANEYNIDVNRQKFKGMYGETNINGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YK+P + V+V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 PQTFMNLSGESVREVCDFYKIPNDNVIVIYDDISLEVGNIRIRPKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R++IG+G P G D +L KF+ RE ++ + + ++ ++S+ E
Sbjct: 121 L-GTDVFPRVKIGVGGPAG--DLVNHVLGKFSKEERESLEKTFKPAIGAVETIISESTAE 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMNKFN 183
>gi|307150148|ref|YP_003885532.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
gi|306980376|gb|ADN12257.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
Length = 210
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 7 LRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFG 65
+ +G + + P L +GLGNP KY+ TRHN +GFE +D A+S +S + F
Sbjct: 1 MAKGNSSEIIIPQLIIGLGNPEQKYEKTRHN-IGFEAVDVLAKSWQLSWQQNKRFQGLFT 59
Query: 66 QGF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 124
+G D + L KP TYMN SGES + +YKLP +LV +DDM LP G +RLR +G
Sbjct: 60 EGMGASDKKIRLLKPLTYMNRSGESVRAVLDWYKLPPESILVIYDDMDLPLGRIRLRLSG 119
Query: 125 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 184
GGHNG+KS++++ G+++F RLRIGIG+ G+ + + +L +F+A E I LQ
Sbjct: 120 SAGGHNGIKSIISHV-GSQDFPRLRIGIGKSNGKKETISHVLGRFSADETEVIAKILQLV 178
Query: 185 VEVLKLLLSKGLTESARHFN 204
+ +K + +G+ ++ +N
Sbjct: 179 EQTVKTSMKEGIEKAMSLYN 198
>gi|300115102|ref|YP_003761677.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
gi|299541039|gb|ADJ29356.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
Length = 193
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 113/196 (57%), Gaps = 18/196 (9%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP- 73
A WL +GLGNPG +Y TRHN GF +DA A GI G F GD
Sbjct: 2 AATAWLLIGLGNPGIEYAQTRHN-AGFWWLDAVASELGIDFKP-------GAKFFGDYAR 53
Query: 74 -------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 126
+ L KP T+MN SG++ L YY++PL R+L+ HDD+ LP G+ +L+ GGH
Sbjct: 54 AHWRGHDLWLLKPTTFMNRSGQAVLALLNYYQIPLERLLIAHDDLDLPPGIAKLKRTGGH 113
Query: 127 GGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
GGHNGL+ ++N G R+F RLR+G+G P D +++L + + R+ I+TA+ G E
Sbjct: 114 GGHNGLRDIINRL-GRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIETAIGAGFE 172
Query: 187 VLKLLLSKGLTESARH 202
VL +L+ G TE A H
Sbjct: 173 VLPEVLA-GDTEKAMH 187
>gi|319654944|ref|ZP_08009018.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
gi|317393369|gb|EFV74133.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
Length = 186
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GF++ID ++ I +N K FG G+V V L KP
Sbjct: 3 LIVGLGNPGKQYDKTRHN-IGFDVIDVLSDRLNIPLNQAKLKGVFGTGYVNGEKVFLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES + Y+++ + ++V +DD+ LP G +RLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGESIRAVMDYFEINDDELVVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RPP M ++L +F + +D ++ + + K +
Sbjct: 122 -GTQEFNRIRVGIDRPPSGMKVPDYVLGRFTKEEQAIMDETAKKCADACEEWFKKPFLQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNDFN 185
>gi|365154887|ref|ZP_09351285.1| peptidyl-tRNA hydrolase [Bacillus smithii 7_3_47FAA]
gi|363628998|gb|EHL79691.1| peptidyl-tRNA hydrolase [Bacillus smithii 7_3_47FAA]
Length = 187
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG+KY+GTRHN +GF++ID A + T K + G +LL KP
Sbjct: 4 LIAGLGNPGEKYRGTRHN-IGFDVIDELAHRLQSPLTTAKHKGIYTIVRSGGHQLLLLKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES + YYK+ + +LV +DD+ LP G +RLR G GGHNG+KSV+ +
Sbjct: 63 LTYMNLSGESIAEVMRYYKIDIENLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSVIQH- 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRP G ++L KF+ R ++ A+++ + L K E
Sbjct: 122 TGTEQFKRIRIGIGRPDGNNTVIDYVLGKFDKEQRLIMNEAVKKSADACLEWLEKPFPEV 181
Query: 200 ARHFNT 205
FN+
Sbjct: 182 MNQFNS 187
>gi|269797672|ref|YP_003311572.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
gi|269094301|gb|ACZ24292.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
Length = 192
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ T+HN +GF +IDA A+S + +A V VLL KP
Sbjct: 3 LVVGLGNPGKQYEKTKHN-IGFMVIDAIADSAPHTPWREEQRAEVCSITVDGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 62 QTFMNLSGESVGPLMRYYKIDPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R R+GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 122 -GTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKG 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNQFN 185
>gi|153814528|ref|ZP_01967196.1| hypothetical protein RUMTOR_00742 [Ruminococcus torques ATCC 27756]
gi|317500571|ref|ZP_07958792.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089328|ref|ZP_08338229.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336438725|ref|ZP_08618350.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 1_1_57FAA]
gi|145848022|gb|EDK24940.1| aminoacyl-tRNA hydrolase [Ruminococcus torques ATCC 27756]
gi|316898004|gb|EFV20054.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405509|gb|EGG85041.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
gi|336018318|gb|EGN48069.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 1_1_57FAA]
Length = 193
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 116/191 (60%), Gaps = 3/191 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+GTRHN VGFE+ID +E I ++ +A G+G + V+LAK
Sbjct: 2 FIIAGLGNPTKQYEGTRHN-VGFEVIDRISEKYNIDVDAKKHRALIGKGIIQGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYK+ + ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESVRSLLDYYKVDEEHELIVIYDDISLDVGQLRIRAKGSAGGHNGMKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G++ F R+++G+G P + D ++L F+ + +D V ++L++S +
Sbjct: 121 HL-GSQVFPRIKVGVGEKPAKYDLADYVLGHFSKGEAKLMDEGYDHAVHAVELIVSGQIN 179
Query: 198 ESARHFNTIQK 208
E+ +N +K
Sbjct: 180 EAMNEYNRKKK 190
>gi|435852895|ref|YP_007314214.1| peptidyl-tRNA hydrolase [Halobacteroides halobius DSM 5150]
gi|433669306|gb|AGB40121.1| peptidyl-tRNA hydrolase [Halobacteroides halobius DSM 5150]
Length = 185
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY+ TRHN GF +D A++ +N KA + V ++LAKP
Sbjct: 3 LIVGLGNPGIKYQSTRHN-AGFMALDRLAKNYHTEINREEHKAMIEKIRVNGETIILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG++ ++ YY + +++ +DD+ L G +R+R GGHGGHNG+KS+
Sbjct: 62 QTFMNKSGQAVKKISDYYDIDPKDIVIVYDDLDLAPGRIRVRPTGGHGGHNGIKSIFAGL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
G +EF RLR+GIGRP QM ++L +F +ID AL E V+ LKL L +
Sbjct: 122 -GTKEFPRLRVGIGRPK-QMSVVDYVLDQFETEEWSKIDQALDEAVDALKLYLEQ 174
>gi|154503861|ref|ZP_02040921.1| hypothetical protein RUMGNA_01687 [Ruminococcus gnavus ATCC 29149]
gi|336432001|ref|ZP_08611841.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153795460|gb|EDN77880.1| putative aminoacyl-tRNA hydrolase [Ruminococcus gnavus ATCC 29149]
gi|336019445|gb|EGN49169.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 192
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 119/193 (61%), Gaps = 3/193 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNP +Y+GTRHN VGFE+IDA A I ++T +A G+G + V+LAK
Sbjct: 2 FIIVGLGNPTPEYEGTRHN-VGFEVIDALARKYNIDVDTKKHRAYIGKGMIEGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYK+ + +LV +DD+ L G +R+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESVRSLLDYYKVDEEQELLVIYDDISLGVGQIRIRAKGSAGGHNGIKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G + F R+++G+G P + D ++L F+ +E+++ + V +K +++ +
Sbjct: 121 HL-GGQVFPRIKVGVGEKPPKWDLADYVLGHFSKEEQEQMEEGYEHAVCAVKEIVTGNIE 179
Query: 198 ESARHFNTIQKYK 210
+ +N +K K
Sbjct: 180 AAMNEYNRKKKEK 192
>gi|297582392|ref|YP_003698172.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
gi|297140849|gb|ADH97606.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
Length = 191
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG Y+ TRHN VGF++ID ++ GI ++ K FG P L KP
Sbjct: 3 LAVGLGNPGKAYERTRHN-VGFDVIDHVSDQLGIPLDQNKFKGVFGTHRTPKGPFTLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSGES +A YY +P +LV +DD+ LP G +RLR GGHGGHNG++S +++
Sbjct: 62 MTFMNLSGESIRQIADYYDIPPEDILVIYDDLDLPPGKIRLRTKGGHGGHNGIRSTLSHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
F R+RIGIGRP +L +F+ RE +D A+++ + ++ +
Sbjct: 122 N-TESFNRIRIGIGRPEPGTKVTDHVLGRFSPDDRELVDEAVRQAAKAVEAWMDDSFILV 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNDFNS 186
>gi|359410005|ref|ZP_09202470.1| Peptidyl-tRNA hydrolase [Clostridium sp. DL-VIII]
gi|357168889|gb|EHI97063.1| Peptidyl-tRNA hydrolase [Clostridium sp. DL-VIII]
Length = 191
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 110/175 (62%), Gaps = 8/175 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GF++ID A+ I +N K +G+GF+ + V+L K
Sbjct: 2 FLIVGLGNPGKEYEDTRHN-IGFKVIDNIAKEYNIEINRQKFKGVYGEGFINNNKVMLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +Y L + VLV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 61 PTTYMNLSGESVREVVDFYNLENSEVLVIYDDISLEIGKLRIRDKGSAGGHNGIKSIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLK 189
G+ F+R+++GIG+P +D ++L +F I E ID + + E+++
Sbjct: 121 L-GSDIFSRIKVGIGQP--NVDLVKYVLGRFTKEEMTILSESIDASTKAAEEIIR 172
>gi|339006645|ref|ZP_08639220.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus LMG 15441]
gi|421874172|ref|ZP_16305779.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus GI-9]
gi|338775854|gb|EGP35382.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus LMG 15441]
gi|372456827|emb|CCF15328.1| peptidyl-tRNA hydrolase [Brevibacillus laterosporus GI-9]
Length = 190
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 103/167 (61%), Gaps = 2/167 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG +Y+ TRHN VGF ID ++ I ++T+ + G+G V VLL KP
Sbjct: 3 VIIGLGNPGKQYEDTRHN-VGFLAIDTLSKELQIPLSTMKFRGIIGEGNVQGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGE+ G + ++YKL ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 QTYMNLSGETVGQIVSFYKLTAKDIVVIYDDLDLPVGKLRLREKGSAGGHNGIKSIIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
G ++F+R++IGI RP ++L F+ I A+Q +
Sbjct: 122 -GTQDFSRIKIGIDRPEPGKSVSDYVLHSFSKSEWPHIQDAIQSAAK 167
>gi|282848944|ref|ZP_06258333.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294793436|ref|ZP_06758573.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
gi|416998853|ref|ZP_11939522.1| aminoacyl-tRNA hydrolase [Veillonella parvula ACS-068-V-Sch12]
gi|282581219|gb|EFB86613.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294455006|gb|EFG23378.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
gi|333977006|gb|EGL77865.1| aminoacyl-tRNA hydrolase [Veillonella parvula ACS-068-V-Sch12]
Length = 192
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ T+HN +GF +IDA A+S + +A V VLL KP
Sbjct: 3 LVVGLGNPGKQYEKTKHN-IGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 62 QTFMNLSGESVGPLMRYYKIDPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R R+GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 122 -GTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKG 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNQFN 185
>gi|374611741|ref|ZP_09684525.1| peptidyl-tRNA hydrolase [Mycobacterium tusciae JS617]
gi|373548709|gb|EHP75394.1| peptidyl-tRNA hydrolase [Mycobacterium tusciae JS617]
Length = 192
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN +GF + D A+ G S VH K A G +
Sbjct: 1 MAEPQLVVGLGNPGPQYATTRHN-IGFLVADILADRIG-SGFKVHKKSGAEVVTGQLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ YMN SG PLA +Y + ++V HD++ + G +RL+ GG GHNGL
Sbjct: 59 AVVLAKPRCYMNESGRQVAPLAKFYSVAPADIIVIHDELDIDFGRIRLKSGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + G +FAR+RIGIGRPPG+M+ AF+L FN+ + + T ++ + +LL+
Sbjct: 119 RSVGSAL-GTNDFARVRIGIGRPPGRMEGAAFVLGTFNSAEWKEVPTICEQAADATELLV 177
Query: 193 SKGLTESARHFNTIQKY 209
S+GL E A+ NT+ +
Sbjct: 178 SQGL-EPAQ--NTVHAW 191
>gi|108801218|ref|YP_641415.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119870369|ref|YP_940321.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126437198|ref|YP_001072889.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
gi|119390965|sp|Q1B425.1|PTH_MYCSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229423|sp|A3Q5H1.1|PTH_MYCSJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229424|sp|A1UL23.1|PTH_MYCSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108771637|gb|ABG10359.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119696458|gb|ABL93531.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126236998|gb|ABO00399.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
Length = 192
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 110/184 (59%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN VGF + D A G H K A G +
Sbjct: 1 MAEPLLVVGLGNPGPNYAKTRHN-VGFVVADLLAGRIGSGFKA-HRKSGADIATGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+TYMN SG + GPLA +Y + V+V HD++ + G +RL+ GG GHNGL
Sbjct: 59 AVVLAKPRTYMNESGRNVGPLAKFYSVAPADVIVIHDELDIDFGRIRLKFGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
KSV G ++F R+R+G+GRPPG+ D ++L+ F ++ R + T ++ + +LL+
Sbjct: 119 KSVAAAL-GTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELLI 177
Query: 193 SKGL 196
++GL
Sbjct: 178 AQGL 181
>gi|294791582|ref|ZP_06756730.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
gi|294456812|gb|EFG25174.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
Length = 192
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ T+HN +GF +IDA A+S + +A V VLL KP
Sbjct: 3 LVVGLGNPGKQYEKTKHN-IGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 62 QTFMNLSGESVGPLMRYYKIDPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R R+GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 122 -GTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKG 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNQFN 185
>gi|357018984|ref|ZP_09081244.1| peptidyl-tRNA hydrolase [Mycobacterium thermoresistibile ATCC
19527]
gi|356481305|gb|EHI14413.1| peptidyl-tRNA hydrolase [Mycobacterium thermoresistibile ATCC
19527]
Length = 197
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 112/197 (56%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
A P L VGLGNPG +Y GTRHN +GF + D A G VH K A G +
Sbjct: 7 AAGPRLIVGLGNPGPRYAGTRHN-LGFMVADILAGRMGEKFK-VHKKSGAEVITGRLAGR 64
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKP+ YMN SG GPLA +Y + ++V HD++ L G +RL+ GG GHNGL
Sbjct: 65 PVILAKPRCYMNESGRQVGPLAKFYSVAPADIVVIHDELDLEFGRIRLKFGGGVAGHNGL 124
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV G +EF R+RIGIGRPPG+ ++LQ F+A R + T ++ +LLL
Sbjct: 125 RSVSAAL-GTQEFHRVRIGIGRPPGRKSAADYVLQNFSAAERGEVPTICEQAAHATELLL 183
Query: 193 SKGLTESARHFNTIQKY 209
GL + NT+ +
Sbjct: 184 EHGLEPAQ---NTVHAW 197
>gi|384263684|ref|YP_005419391.1| peptidyl-tRNA hydrolase SpoVC [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387896579|ref|YP_006326875.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens Y2]
gi|380497037|emb|CCG48075.1| peptidyl-tRNA hydrolase SpoVC [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387170689|gb|AFJ60150.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens Y2]
Length = 188
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHN-VGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP G M ++L F I+ A+ + V+ + L+K E
Sbjct: 122 -GTPEFDRVRIGIGRPAGGMKVVDYVLGAFTKEELPNINDAVSKTVKACEASLTKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|261367662|ref|ZP_05980545.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
gi|282570454|gb|EFB75989.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
Length = 197
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 109/195 (55%), Gaps = 3/195 (1%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG 70
F + WL GLGNP KY GTRHN GFE +D AE +N + +G VG
Sbjct: 4 FSSLSGADWLIAGLGNPEPKYDGTRHN-AGFEALDYLAEQWQCPLNKSKWQGLYGTTQVG 62
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
+ V+L KP TYMNLSG+S P A +YK+P N ++V DD+ G LR+R +G GGHN
Sbjct: 63 EHKVVLLKPLTYMNLSGQSIAPTANFYKIPANHIIVLCDDITQQPGHLRIRPHGSAGGHN 122
Query: 131 GLKSVMNNFRGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
GLKS++ + G EF+R+RIGIG +P Q D ++L K R+ + + + +
Sbjct: 123 GLKSIIASL-GTEEFSRIRIGIGAKPNPQYDLAVWVLGKLPPEDRKAMTDRYPDIEQACR 181
Query: 190 LLLSKGLTESARHFN 204
LL+ L + FN
Sbjct: 182 LLMDDNLQYAQNKFN 196
>gi|229136898|ref|ZP_04265526.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
gi|228646563|gb|EEL02769.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
Length = 177
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 13/160 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 24 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 82
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 83 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 142
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT 179
G +EF R+R+GI RP +K+N +R RI T
Sbjct: 143 -GTQEFQRIRMGIDRP-----------KKWNEGSRLRIRT 170
>gi|336437123|ref|ZP_08616832.1| hypothetical protein HMPREF0988_02417 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336006257|gb|EGN36293.1| hypothetical protein HMPREF0988_02417 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 245
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 117/198 (59%), Gaps = 3/198 (1%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD 71
V ++ VGLGNPG +Y+GTRHN VGFE+ID AE I+++ +A G+G +G
Sbjct: 48 SNEVKNLFIIVGLGNPGKEYEGTRHN-VGFEVIDRIAEKYNIAVDGKKHRALIGKGMIGG 106
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
V+LAKPQTYMNLSGES L YYK+ +LV +DD+ + G +R+R G GGHN
Sbjct: 107 QKVILAKPQTYMNLSGESVRSLLDYYKVDETEELLVIYDDISMENGQIRIRAKGSAGGHN 166
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
G+K+++ + G + F R+++G+G P + D ++L F+ +E ++ + +
Sbjct: 167 GIKNIIAHLNG-QVFPRIKVGVGEKPPRYDLADYVLGHFSKAEQELMEEGYDHALHAAEQ 225
Query: 191 LLSKGLTESARHFNTIQK 208
++ +T + +N +K
Sbjct: 226 IIDGEITAAMNEYNRKKK 243
>gi|357391539|ref|YP_004906380.1| putative peptidyl-tRNA hydrolase [Kitasatospora setae KM-6054]
gi|311898016|dbj|BAJ30424.1| putative peptidyl-tRNA hydrolase [Kitasatospora setae KM-6054]
Length = 195
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 112/188 (59%), Gaps = 3/188 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG +Y RHN +GF +++ A+ G +A +G + V+LA
Sbjct: 11 PWLVVGLGNPGKEYARNRHN-IGFMVVELLAQRAGAKFKAHKSRAQVAEGRLAGRRVVLA 69
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P ++MNLSG L +YK+P + ++ HD++ L LRL+ GG GHNGLKS+
Sbjct: 70 EPMSFMNLSGGPVTALRDFYKVPTSAIVAVHDELDLDYAALRLKTGGGDNGHNGLKSMTK 129
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ ++ R+R GIGRPPG+M+ F+L+ F++ R+ +D + + ++ LLS GL
Sbjct: 130 SL--GPDYHRVRCGIGRPPGRMEVADFVLKDFSSTERKDLDWFVDRAADAVEALLSDGLE 187
Query: 198 ESARHFNT 205
+ +++N+
Sbjct: 188 RAQQNYNS 195
>gi|291550021|emb|CBL26283.1| peptidyl-tRNA hydrolase [Ruminococcus torques L2-14]
Length = 192
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 115/191 (60%), Gaps = 3/191 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+GTRHN VGF++ID +E I + +A G+G + V+L K
Sbjct: 2 YIIAGLGNPTKEYEGTRHN-VGFDVIDRLSERYNIDVTMEKHRALIGKGMIAGQKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES + YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESIRSVIDYYKVDPEKELIVIYDDISLGVGQLRIRAKGSAGGHNGIKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G + F R+++G+G P + D ++L F+ +E + V+ ++L++S ++
Sbjct: 121 HL-GGQVFPRIKVGVGEKPPKYDLADYVLGHFSKAEQELMSEGYDNAVKAVELIVSDQIS 179
Query: 198 ESARHFNTIQK 208
E+ +N +K
Sbjct: 180 EAMNEYNRKKK 190
>gi|407475939|ref|YP_006789816.1| peptidyl-tRNA hydrolase [Exiguobacterium antarcticum B7]
gi|407060018|gb|AFS69208.1| Peptidyl-tRNA hydrolase [Exiguobacterium antarcticum B7]
Length = 185
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY TRHN +GF +DA A+ GI + KA FG G + VLL KP
Sbjct: 4 IVGLGNPGAKYANTRHN-IGFLAVDALAKEHGIKLTESKFKAVFGTGMMKGERVLLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE+ PL +YK+ + VLV +DD+ LP +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 187
G ++ RL++G+GRPP + ++L F + + L + V +
Sbjct: 122 GTQDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQVTLQHVLADSVNI 168
>gi|423718317|ref|ZP_17692499.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidans TNO-09.020]
gi|383365253|gb|EID42552.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidans TNO-09.020]
Length = 186
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN VGF +ID A+ IS T + V+L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHN-VGFMVIDELAKRWNISFQTAKFNGMIASHIISGEKVILCKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY++ +N V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 62 LTYMNLSGECVRPLIDYYRIDINDVVVIYDDLDLPVGKIRLRMKGSAGGHNGIKSLIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+RIGIGRP ++L +F+ I A+ + + +++ +
Sbjct: 122 -GTQEFKRIRIGIGRPASGEKVIDYVLGRFHEEESGAIMEAILRSADACEKAVTEPFLQV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNEFNV 186
>gi|304405855|ref|ZP_07387513.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
gi|304345098|gb|EFM10934.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
Length = 186
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG KY+ TRHN VGF ID+ A+ GIS+ CKA G+G VG V L K
Sbjct: 3 WI-VGLGNPGTKYQNTRHN-VGFMAIDSLAKRWGISVTQSKCKALIGEGNVGGTKVALIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ YYK+ L ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGETVRAYMDYYKVALEDLIVIYDDLDTEMGRIRLRYQGSPGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP + ++L F ++++ +++ + + L +
Sbjct: 121 -TGTQTFNRIRMGITRPLPGGNIADYVLDNFPKAEQDKLAIMIEQTCDAAEFALKATFEQ 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|359476471|ref|XP_002265105.2| PREDICTED: uncharacterized protein LOC100244524 [Vitis vinifera]
Length = 313
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 82/111 (73%), Gaps = 2/111 (1%)
Query: 51 QGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDD 110
Q I M+TVH K F QG GD PV LAKP TYM+LSG+S GPLAAY KLPL+ V+VFHDD
Sbjct: 136 QEIPMDTVHYKEFFRQGCAGDVPVFLAKPWTYMDLSGKSAGPLAAYCKLPLDSVVVFHDD 195
Query: 111 MGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDP 161
+GLP G+LRL H GG HNGL SV+ FRGNREF R R+ +G+P +DP
Sbjct: 196 IGLPWGLLRLHHKGGRRNHNGLMSVILYFRGNREFLRPRVDVGKP--VIDP 244
>gi|312109200|ref|YP_003987516.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
gi|336233594|ref|YP_004586210.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
gi|311214301|gb|ADP72905.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
gi|335360449|gb|AEH46129.1| Peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
Length = 187
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN VGF +ID A+ IS T + V+L KP
Sbjct: 4 LFVGLGNPGKEYEQTRHN-VGFMVIDELAKRWNISFQTAKFNGMIASHIISGEKVILCKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY++ +N V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 63 LTYMNLSGECVRPLIDYYRIDINDVVVIYDDLDLPVGKIRLRMKGSAGGHNGIKSLIHHL 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+RIGIGRP ++L +F+ I A+ + + +++ +
Sbjct: 123 -GTQEFKRIRIGIGRPASGEKVIDYVLGRFHEEESGAIMEAILRSADACEKAVTEPFLQV 181
Query: 200 ARHFNT 205
FN
Sbjct: 182 MNEFNV 187
>gi|375140499|ref|YP_005001148.1| peptidyl-tRNA hydrolase [Mycobacterium rhodesiae NBB3]
gi|359821120|gb|AEV73933.1| peptidyl-tRNA hydrolase [Mycobacterium rhodesiae NBB3]
Length = 192
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN +GF + D A+ G S VH K A G +
Sbjct: 1 MAEPQLVVGLGNPGPQYATTRHN-LGFLVADILADRIG-SGFKVHKKSGAEVVTGQLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKP+ YMN SG PLA +Y + ++V HD++ + G +RL+ GG GHNGL
Sbjct: 59 PVVLAKPRCYMNESGRQVAPLAKFYSVAPADIVVIHDELDIDFGRIRLKSGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+S + + G+ EF R+RIGIGRPPG+M+ AF+L F + + + T ++ + +LLL
Sbjct: 119 RS-LGSALGSNEFQRVRIGIGRPPGRMEGAAFVLGTFTSAEWKEVPTICEQAADATELLL 177
Query: 193 SKGLTESARHFNTIQKY 209
S+GL E A+ NT+ +
Sbjct: 178 SQGL-EPAQ--NTVHAW 191
>gi|150014977|ref|YP_001307231.1| peptidyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
gi|189038283|sp|A6LPJ5.1|PTH_CLOB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149901442|gb|ABR32275.1| Aminoacyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
Length = 191
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 110/176 (62%), Gaps = 10/176 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG++Y+ TRHN +GF++ID A+ I +N K +G+GF+ V+L K
Sbjct: 2 FLIVGLGNPGNEYENTRHN-IGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +Y L + +LV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 61 PTTYMNLSGESVREVVDFYNLNNDEILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIAH 120
Query: 139 FRGNRE-FARLRIGIGRPPGQMDPKAFLLQKF----NAIARERIDTALQEGVEVLK 189
N E F+R+++G+G+P G D +L KF AI E I+ + + E++K
Sbjct: 121 L--NSEIFSRIKVGVGQPNG--DLVKHVLGKFTKEETAILSESIEASTKAAAEIIK 172
>gi|172040258|ref|YP_001799972.1| hypothetical protein cur_0578 [Corynebacterium urealyticum DSM
7109]
gi|448823229|ref|YP_007416394.1| peptidyl-tRNA hydrolase [Corynebacterium urealyticum DSM 7111]
gi|171851562|emb|CAQ04538.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
gi|448276726|gb|AGE36150.1| peptidyl-tRNA hydrolase [Corynebacterium urealyticum DSM 7111]
Length = 215
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGF----EMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
PWL VGLGNPG +Y+ TRHN +G+ E++D G + Q +
Sbjct: 23 PWLVVGLGNPGAQYETTRHN-IGYLAVDELLDDLTPMPGTLSAHKRTNSLICQTKIDGRS 81
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V++A+ ++YMNLSG + G LA ++K+P V+V HD++ L +R++ GG GHNGLK
Sbjct: 82 VIIARARSYMNLSGGAIGALAKFFKIPAEHVIVIHDELDLDPAAVRIKVGGGENGHNGLK 141
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
S G R++ R+R+GIGRPPG+MDP +F+L+ F+ E + +L + + ++L +S
Sbjct: 142 STTQAL-GTRDYVRIRMGIGRPPGRMDPASFVLKPFSKQELEWLPLSLGDAADAVRLTVS 200
Query: 194 KGL 196
+G+
Sbjct: 201 RGV 203
>gi|304436451|ref|ZP_07396425.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370497|gb|EFM24148.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 208
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 2/191 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y T+HN VGF +IDA AE +S + ++ + +G + L KP
Sbjct: 3 LIAGLGNPGAEYANTKHN-VGFMLIDALAEHLNVSAWKEYFSSSVAEARIGGEKIFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGE+ GP+ +YYKL ++V HDDM +P G +R+R G GGHNG+KS++++
Sbjct: 62 LTYMNNSGEAIGPMLSYYKLSSEDLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILSHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ FAR+RIGIGRPP +L F +I A+ + + +++ G +
Sbjct: 122 -GSEAFARVRIGIGRPPAGWTVINHVLAPFAPEDTPKIREAIAYLLPAVTCIVTDGTDFA 180
Query: 200 ARHFNTIQKYK 210
+N +K K
Sbjct: 181 MNRYNPHRKKK 191
>gi|350268690|ref|YP_004879998.1| peptidyl-tRNA hydrolase [Oscillibacter valericigenes Sjm18-20]
gi|348593532|dbj|BAK97492.1| peptidyl-tRNA hydrolase [Oscillibacter valericigenes Sjm18-20]
Length = 199
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 95/139 (68%), Gaps = 2/139 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG+KY TRHN +GF +D AE Q + +N V K+ + G A VL+ K
Sbjct: 12 WLLVGLGNPGEKYARTRHN-MGFLTVDLLAEKQSVKLNKVKFKSAYNILRFGGARVLVMK 70
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGE+ A +YK+P +RVLV +DD+ LP G LR+R +G GGHNG+K+++
Sbjct: 71 PQTFMNLSGEAVHEAAQFYKIPADRVLVIYDDVSLPVGKLRVRPSGSAGGHNGIKNII-A 129
Query: 139 FRGNREFARLRIGIGRPPG 157
+ G +F R++IGIG P G
Sbjct: 130 YLGTDQFPRVKIGIGDPGG 148
>gi|303229597|ref|ZP_07316385.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
gi|303231900|ref|ZP_07318609.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|401679444|ref|ZP_10811371.1| aminoacyl-tRNA hydrolase [Veillonella sp. ACP1]
gi|429760033|ref|ZP_19292525.1| aminoacyl-tRNA hydrolase [Veillonella atypica KON]
gi|302513429|gb|EFL55462.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|302515722|gb|EFL57676.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
gi|400219378|gb|EJO50246.1| aminoacyl-tRNA hydrolase [Veillonella sp. ACP1]
gi|429178745|gb|EKY20017.1| aminoacyl-tRNA hydrolase [Veillonella atypica KON]
Length = 192
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ T+HN +GF +IDA A+S + KA V VLL KP
Sbjct: 3 LVVGLGNPGKQYEATKHN-IGFMVIDAIADSVSHTPWREEQKAEVCSINVAGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 62 QTFMNASGESVGPLMRYYKIDPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R R+GIGRP Q +L F+ +E++ +++ V+ + L G+ +
Sbjct: 122 -GTENFPRFRVGIGRPLPQWTVIDHVLAPFSEENQEKVQKGIKDTVKAVLGTLEVGIDKG 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNQFN 185
>gi|453049720|gb|EME97295.1| peptidyl-tRNA hydrolase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 198
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 112/194 (57%), Gaps = 10/194 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---- 73
PWL VGLGNPG +Y G RHN VGF + D AE G +A +G +G AP
Sbjct: 9 PWLIVGLGNPGGEYAGNRHN-VGFMVADLLAERIGAKFKAHKARAQVVEGRLG-APGPSS 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V++AKP ++MNLSG T L +YK+P+ R++ HD++ + G LRL+ GG GHNG
Sbjct: 67 RRVVVAKPMSFMNLSGGPTAALRDFYKVPVGRIVAVHDELDIDFGQLRLKLGGGDNGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F+A R+ + + + ++ L
Sbjct: 127 LKSITKAL--GSDYCRVRFGIGRPPGRMQVADFVLKDFSAAERKDLAFEVDRAADAVESL 184
Query: 192 LSKGLTESARHFNT 205
+ GL + +N+
Sbjct: 185 IVDGLERAQGTYNS 198
>gi|389819103|ref|ZP_10209144.1| peptidyl-tRNA hydrolase [Planococcus antarcticus DSM 14505]
gi|388463518|gb|EIM05870.1| peptidyl-tRNA hydrolase [Planococcus antarcticus DSM 14505]
Length = 187
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG Y+ TRHN +GF+++D A + K + + V+L KP
Sbjct: 3 LIIGLGNPGKAYEDTRHN-IGFKVVDYLASQWNAPLTQSKFKGMYSISHRPEGKVMLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE+ L YY + L ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGETVSALMDYYGIELKDIIVIYDDLDLPAGQLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF RLRIGI RPP M ++LQ+F+ + A+++ + L K E
Sbjct: 122 -GTQEFNRLRIGISRPPAGMKVPDYVLQRFSKEEIPEVADAIKKSAAACETWLFKPYLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNQFN 185
>gi|313893361|ref|ZP_07826935.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442130|gb|EFR60548.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 192
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ T+HN +GF ++DA A+S + +A V VLL KP
Sbjct: 3 LVVGLGNPGKQYEKTKHN-IGFMVVDAIADSVPHTPWREEQRAEVCSITVAGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN+SGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 62 QTFMNVSGESVGPLMRYYKIDPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R R+GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 122 -GTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKG 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNQFN 185
>gi|320529007|ref|ZP_08030099.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
gi|320138637|gb|EFW30527.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
Length = 195
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y T+HN VGF ++DA A+ G+S + + +G V L KP
Sbjct: 3 IIAGLGNPGAEYTQTKHN-VGFMLVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GP+ +YYK+ ++V HDDM +P G +R+R GG GGHNG+KS++++
Sbjct: 62 QTYMNDSGSALGPMLSYYKIDTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRPP +L F+ + A+ + ++ +++ G+ +
Sbjct: 122 -GTEEFPRVRIGIGRPPVGWTVINHVLAPFSTDDASLVGEAIGYLLPAVEYIVTDGVDMA 180
Query: 200 ARHFNTIQK 208
FN +K
Sbjct: 181 MNRFNPRKK 189
>gi|27262436|gb|AAN87499.1| Peptidyl-tRNA hydrolase [Heliobacillus mobilis]
Length = 190
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 109/188 (57%), Gaps = 2/188 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG Y+ TRHN +GF ++D AE G + +F + +G V L KPQ
Sbjct: 4 IVGLGNPGRDYEKTRHN-IGFMVVDQLAERWGHDGFKAKFQGSFSEVRLGGQKVFLLKPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSG++ +AA+YKL +LV +DD+ LP G LR R G GGHNG+KS++
Sbjct: 63 TYMNLSGQAASAMAAFYKLAPEDILVVYDDLDLPPGKLRGRTKGSSGGHNGIKSLIACL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G+ F RL++GIGRP + +++L+ F A I A+ + ++L L +G+ E
Sbjct: 122 GSENFPRLKLGIGRPASRQPSASYVLESFRAEELADIQKAIDLACDAVELWLERGMIEVM 181
Query: 201 RHFNTIQK 208
FN +K
Sbjct: 182 NRFNGGEK 189
>gi|452990576|emb|CCQ98195.1| peptidyl-tRNA hydrolase [Clostridium ultunense Esp]
Length = 189
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG++Y+ TRHN +GF+++D A+ I M +A G+ +LL KP
Sbjct: 4 IVGLGNPGEEYEKTRHN-IGFQVVDLLAKEWSIPMRASKWQALIGEAKKEGERILLTKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMN SG++ + +YKL + +LV +DD+ LP G LRLR G GGHNG+KS++
Sbjct: 63 TYMNRSGDAVRKIMDWYKLSCDDLLVIYDDLDLPVGNLRLREKGSAGGHNGMKSIIQQL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+R+GIG PP ++L F +E++D ++ + LS +
Sbjct: 122 GTEQFKRIRVGIGHPPAGASVPEYVLSPFEKEEKEKVDAGIKLAAQAANAWLSLPFPQVM 181
Query: 201 RHFN 204
FN
Sbjct: 182 NRFN 185
>gi|315644368|ref|ZP_07897508.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
gi|315280245|gb|EFU43537.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
Length = 187
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG Y+ TRHN VGF +DA AE G+ N CK+ +G +G + +L K
Sbjct: 3 WI-VGLGNPGPAYEKTRHN-VGFMALDALAERHGMKFNQNKCKSVIAEGMIGGSKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSGE+ YYK+ L ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKVNLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F RE++ + ++E + L+ L +
Sbjct: 121 -TGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQSMVEETCDALEFSLDHTFEQ 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|433649773|ref|YP_007294775.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis JS623]
gi|433299550|gb|AGB25370.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis JS623]
Length = 192
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 119/197 (60%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A L VGLGNPG +Y TRHN +GF + D ++ G S VH K A G +G
Sbjct: 1 MAETILVVGLGNPGAQYATTRHN-IGFLVADILSDRLG-SGFKVHKKSGAEVATGRLGGQ 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ YMN SG GPLA +Y +P ++V HD++ + G +RL+ GG GHNGL
Sbjct: 59 SVVLAKPRCYMNESGRQVGPLAKFYSVPPADIVVIHDELDIDFGRIRLKFGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV ++ G +F R+RIGIGRPPG+M+ AF+L F + T ++ + +LL+
Sbjct: 119 RSVGSSL-GTNDFQRVRIGIGRPPGRMEGAAFVLGNFTNAEWREVPTICEQAADATELLV 177
Query: 193 SKGLTESARHFNTIQKY 209
S+GL E A+ NT+ +
Sbjct: 178 SQGL-EPAQ--NTVHAW 191
>gi|427394339|ref|ZP_18887776.1| peptidyl-tRNA hydrolase [Alloiococcus otitis ATCC 51267]
gi|425730028|gb|EKU92875.1| peptidyl-tRNA hydrolase [Alloiococcus otitis ATCC 51267]
Length = 187
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 99/151 (65%), Gaps = 3/151 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPGDKY+ T+HN +GF +D A G++ N ++ + +G +G V L KP
Sbjct: 3 LIFGLGNPGDKYRSTKHN-IGFITLDEIAFQMGLAFNKSQFQSVYAEGRMGSEKVFLIKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
QT+MNLSG+S P YY L + ++V HDD+ L G +RLR GGHGGHNGL+S++
Sbjct: 62 QTFMNLSGQSVRPWLDYYDLDEGSDMVVVHDDLDLAVGRVRLRDQGGHGGHNGLRSIIKE 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKF 169
G+++F R++IGIGRP G+M + +L KF
Sbjct: 122 -TGSKKFNRIKIGIGRPKGKMSVVSHVLSKF 151
>gi|404330858|ref|ZP_10971306.1| peptidyl-tRNA hydrolase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 192
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN +GFE++D AE I ++ KA FG+G + V+L KP
Sbjct: 5 MIVGLGNPGSEYAHTRHN-MGFEVVDRLAEKYQIRLDHSKFKALFGKGTIDGNAVILVKP 63
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
TYMN SGE+ GPL ++KL P + +LV HDDM L G LRLRH G GGHNG+KS++ +
Sbjct: 64 LTYMNASGEAVGPLLHFFKLVPDDDLLVIHDDMDLNMGRLRLRHKGSSGGHNGIKSLILH 123
Query: 139 FRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G FAR+++G+G P Q ++L +FN + ++ + + LS +
Sbjct: 124 L-GTENFARIKVGVGHPERTQQAVVNYVLSRFNREEQAIMEDTFERASDAAAAWLSLPFS 182
Query: 198 ESARHFNT 205
E FN
Sbjct: 183 ELMNRFNA 190
>gi|313895642|ref|ZP_07829198.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975768|gb|EFR41227.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 195
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y T+HN VGF ++DA A+ G+S + + +G V L KP
Sbjct: 3 IIAGLGNPGAEYTQTKHN-VGFILVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GP+ +YYK+ ++V HDDM +P G +R+R GG GGHNG+KS++++
Sbjct: 62 QTYMNDSGSALGPMLSYYKIDTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRPP +L F+ + A+ + ++ +++ G+ +
Sbjct: 122 -GTEEFPRVRIGIGRPPVGWTVINHVLAPFSTDDASLVGEAIGYLLPAVEYIVTDGVDMA 180
Query: 200 ARHFNTIQK 208
FN +K
Sbjct: 181 MNRFNPRKK 189
>gi|402303199|ref|ZP_10822296.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC9]
gi|400379134|gb|EJP31982.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC9]
Length = 195
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y T+HN VGF ++DA A+ G+S + +G V L KP
Sbjct: 3 IIAGLGNPGAEYTQTKHN-VGFMLVDALAQRLGVSAWKEAFSSLVAAVRIGSEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GP+ +YYK+ ++V HDDM +P G +R+R GG GGHNG+KS++++
Sbjct: 62 QTYMNDSGSALGPMLSYYKIDTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRPP +L F+ + A+ + ++ L++ G+ +
Sbjct: 122 -GTEEFPRVRIGIGRPPVGWTVINHVLTPFSTDDASLVGEAIGYLLPAVEYLVTDGVDMA 180
Query: 200 ARHFNTIQK 208
FN +K
Sbjct: 181 MNRFNPRKK 189
>gi|392958406|ref|ZP_10323918.1| peptidyl-tRNA hydrolase [Bacillus macauensis ZFHKF-1]
gi|391875576|gb|EIT84184.1| peptidyl-tRNA hydrolase [Bacillus macauensis ZFHKF-1]
Length = 186
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W FVGLGNPG +++ TRHN VGF +ID ++ GI +N +G G V V L K
Sbjct: 3 W-FVGLGNPGKQFEKTRHN-VGFFVIDELSKRFGIELNQAKFNGLYGSGMVNGEKVYLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES P Y+KL + + V +DD+ +PCG LRLR G GGHNG+KS++ +
Sbjct: 61 PLTYMNLSGESVRPFMDYFKLDVEDLAVIYDDLDMPCGKLRLRQKGSAGGHNGMKSLIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R+R GIGRP + F+L F E + + + + + + L
Sbjct: 121 L-GTDTFNRVRFGIGRPTNRQPVPDFVLSTFAKAEEEAVASLVTKSADACEAFLEMPFNR 179
Query: 199 SARHFN 204
FN
Sbjct: 180 VMNAFN 185
>gi|336326183|ref|YP_004606149.1| peptidyl-tRNA hydrolase [Corynebacterium resistens DSM 45100]
gi|336102165|gb|AEI09985.1| Peptidyl-tRNA hydrolase [Corynebacterium resistens DSM 45100]
Length = 239
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 16/197 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAF---------AESQGISMNTVHCKATFGQGF 68
PWL VGLGNPGDKY TRHN G+ ++D + +Q N++ C Q
Sbjct: 48 PWLIVGLGNPGDKYTTTRHN-AGYLVVDELLADLLPAPGSLAQHRKTNSLIC-----QSR 101
Query: 69 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 128
+G+ PV+LA+P+TYMN SG LA ++K+P RV+V +D++ L +R+R GG G
Sbjct: 102 IGETPVILARPRTYMNESGAPVANLAKFFKVPAERVIVIYDELDLDPEKVRVRMGGGDHG 161
Query: 129 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
HNGL+S+ G +E+ R+ +GIGRPPG+MD +++L+ F+ + A+ + +
Sbjct: 162 HNGLRSITKAL-GTKEYVRIALGIGRPPGRMDVASYVLKPFSKAENAWLPIAVADAADAT 220
Query: 189 KLLLSKGLTESARHFNT 205
+ + +G+ R+ +
Sbjct: 221 RACVQQGVEAGMRYAES 237
>gi|86605936|ref|YP_474699.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
gi|119391024|sp|Q2JV16.1|PTH_SYNJA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86554478|gb|ABC99436.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
Length = 225
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 113/201 (56%), Gaps = 4/201 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG +Y TRHN GF ++D AE GI + + ++G+GF L K
Sbjct: 16 LIVGLGNPGPQYANTRHN-CGFMVVDQLAERWGIPLALEKRFQGSYGEGFALGGKRRLLK 74
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+TYMN SGE+ + +YKL VLV +DDM LP G LRLR +G GGHNG+KSV+ +
Sbjct: 75 PETYMNRSGEAVRAVLDWYKLDPASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSVIEH 134
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ F RLR+G+GRP G D +L F + +D L+ V ++ L +GL
Sbjct: 135 L-GSEAFPRLRLGVGRPKGNQDRVGHVLGSFEPAEQAVLDRVLRAAVAAVECCLQEGLKT 193
Query: 199 SARHFNTIQKYKHIRLQNMPA 219
+ FN + + Q+ PA
Sbjct: 194 AMNRFNPLD-FSGPDRQDQPA 213
>gi|138893725|ref|YP_001124178.1| peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
gi|166199333|sp|A4IJC9.1|PTH_GEOTN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134265238|gb|ABO65433.1| Peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
Length = 186
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN +GF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHN-IGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL +Y + ++ V++ +DD+ LP G +RLR GG GGHNG+KS++++
Sbjct: 62 LTYMNLSGECVCPLIDFYDIAVDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRP ++L +F + + A+ + + ++ +
Sbjct: 122 -GTEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEKPAVMEAVLRAADACEQAVTTPFIQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNDFN 185
>gi|182420017|ref|ZP_02951251.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237669562|ref|ZP_04529542.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376054|gb|EDT73641.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237655006|gb|EEP52566.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 191
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GF+++D A+ I +N K G+GF+ V+L K
Sbjct: 2 FLIVGLGNPGSQYEDTRHN-IGFKVVDNIAKEYNIEINRQKFKGVCGEGFINGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +YKL + VLV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 61 PTTYMNLSGESIREVVDFYKLSNDDVLVIYDDISLDVGRLRIREKGSAGGHNGIKSIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R+++G+G+P +D ++L KF E ++ ++ + K ++S +
Sbjct: 121 L-GTDIFPRIKVGVGQP--NVDLVNYVLGKFTKEEMEVLNESIDASTKAAKEIISNDVKT 177
Query: 199 SARHFNTIQKYKHI 212
+ +N + K I
Sbjct: 178 AMNIYNGFKASKSI 191
>gi|225375821|ref|ZP_03753042.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
gi|225212256|gb|EEG94610.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
Length = 198
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 116/191 (60%), Gaps = 3/191 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNP +Y+ TRHN +GF+++DA A+ IS++ KA G+G + V+LAK
Sbjct: 10 FLIVGLGNPTKQYEKTRHN-IGFDVMDALADKYNISISENKHKALCGKGVIEGMKVVLAK 68
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYKL P + ++V DD+ L G +R+R G GGHNG+K+++
Sbjct: 69 PQTYMNLSGESVAELVNYYKLDPESELIVVFDDISLEPGNIRIRKKGSAGGHNGIKNII- 127
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G + F R+++G+G P D ++L F+ R +++ A+ ++ L++ +
Sbjct: 128 AMTGTQNFMRIKVGVGEKPKGWDLADYVLGHFSTEDRAKVEEAIGHAMDATVLMMQGEVD 187
Query: 198 ESARHFNTIQK 208
++ +N+ K
Sbjct: 188 KAMNDYNSKNK 198
>gi|73748435|ref|YP_307674.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|289432482|ref|YP_003462355.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
gi|452204875|ref|YP_007485004.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi BTF08]
gi|119390933|sp|Q3ZX09.1|PTH_DEHSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|73660151|emb|CAI82758.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|288946202|gb|ADC73899.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
gi|452111931|gb|AGG07662.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi BTF08]
Length = 189
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 110/188 (58%), Gaps = 5/188 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG +Y G RHN VGF+ + FA+ IS + C + G G + D ++LAKP
Sbjct: 3 LIIGLGNPGKEYSGNRHN-VGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L Y L ++V DD+ LP G LRLR G GGHNG+ S++ +
Sbjct: 62 QTYMNLSGKAVNQLLRRYNLKATDIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIITDI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G +EF RL+IGIG+P + + +L F RE I+TA+ E L L++ GL
Sbjct: 122 -GTKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREIIETAIARAAEALACLITSGL 180
Query: 197 TESARHFN 204
++ FN
Sbjct: 181 DTASNRFN 188
>gi|403670114|ref|ZP_10935280.1| peptidyl-tRNA hydrolase [Kurthia sp. JC8E]
Length = 187
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LF+GLGNPG +Y+ T HN VGF+ IDA A+ G+++N A + + V+L KP
Sbjct: 3 LFIGLGNPGKQYEHTHHN-VGFDTIDALADKWGMTLNQEKFNAAYATAHRPEGKVMLMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN+SGE+ P+ Y+ + + ++V +DDM L G LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNISGEAVRPMMDYFDIDVEDIVVIYDDMDLDKGKLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G + F R+R+GI RPP M ++L +F+ + A + L K E
Sbjct: 122 -GTQNFNRVRVGISRPPQGMKVPDYVLSRFSKEEMPAMQEAFSTAADACAFFLEKPFAEV 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNKYN 185
>gi|256826844|ref|YP_003150803.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
gi|256582987|gb|ACU94121.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
Length = 185
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG++Y+ TRHN GF+ ID A+ G C A +G + + V+LAK
Sbjct: 2 YLIVGLGNPGEEYEHTRHN-AGFDTIDILADEAGARYWKNECGALSARGVLANEEVVLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQ+YMN SG L Y + + ++V HDD+ + G +R++ GGH GHNGL+S+ +
Sbjct: 61 PQSYMNTSGGPVKQLCNTYGIAPDNLIVIHDDLDIAPGRIRVKFGGGHAGHNGLRSICDK 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G R++ R+R GIGRPPG+M ++L + A++ E + L+ GL +
Sbjct: 121 L-GTRDWFRVRCGIGRPPGRMSVSDYVLSRPRHEAQDDFQVGCATAAEAVSFLIRNGLEK 179
Query: 199 SARHFN 204
+ + FN
Sbjct: 180 TQQEFN 185
>gi|442805917|ref|YP_007374066.1| peptidyl-tRNA hydrolase Pth [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741767|gb|AGC69456.1| peptidyl-tRNA hydrolase Pth [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 191
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++F GLGNPG +Y TRHN VGFE ID + I + KA G+GF+ V+L K
Sbjct: 2 FVFAGLGNPGKQYDWTRHN-VGFECIDYLSVLYNIPVAKAKFKALVGEGFIEGEKVMLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMN SGES + Y+ L L+R++V +DD+ L G +R+R G G HNG++S++ +
Sbjct: 61 PQTYMNNSGESLREIVDYFNLSLDRLVVIYDDIDLDLGTIRIRSRGSAGTHNGMRSILYH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +F R+RIGIG+P Q D +++L K N RE + ++ ++ ++ G+
Sbjct: 121 LE-SEDFPRIRIGIGKPGPQQDLVSYVLGKLNDDEREIMTEVIKRVALSVREIIVSGVDM 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 AMSKFN 185
>gi|10802611|gb|AAG23529.1|AF244580_1 peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans]
Length = 186
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 3/181 (1%)
Query: 24 LGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYM 83
+GNPG +Y+ TRHN GF ++D A+ GI + K+ G+G + VLL KPQTYM
Sbjct: 6 IGNPGQEYENTRHN-AGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYM 64
Query: 84 NLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNR 143
NLSG + ++YKLPL+R++V +DD+ LP G + LR G GGH G+ S+++ G+
Sbjct: 65 NLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKICLRLKGSAGGHRGMGSIISCL-GSE 123
Query: 144 EFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHF 203
E RL+IGIGR P D K ++LQ F RE ++ L+ E + + L++G ++ F
Sbjct: 124 EIPRLKIGIGR-PAVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAMTDF 182
Query: 204 N 204
N
Sbjct: 183 N 183
>gi|256389403|ref|YP_003110967.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
gi|256355629|gb|ACU69126.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
Length = 198
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGF--VGDAPVLL 76
WL GLGNPG Y G RHN GF ++D A G + +A +G VG V+L
Sbjct: 11 WLIAGLGNPGPGYAGNRHN-AGFMVVDLLAARVGGKFKSHKARADVVEGRLGVGGPRVVL 69
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKP+T+MNLSG L +YK+ +++ HD++ + GVLRL+ GG GHNGL+S+
Sbjct: 70 AKPKTFMNLSGGPVKALRDFYKIEPAQIIAVHDELDVDYGVLRLKLGGGDNGHNGLRSIT 129
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
++ G +E+ R+R G+GRPPG+ DP F+L+ F++ ++ +D + + ++ L+ +GL
Sbjct: 130 SSL-GTKEYHRVRFGVGRPPGRQDPADFVLKDFSSTEKKDLDYNVDRAADAVEDLIRRGL 188
Query: 197 TES 199
E+
Sbjct: 189 VEA 191
>gi|348176914|ref|ZP_08883808.1| peptidyl-tRNA hydrolase [Saccharopolyspora spinosa NRRL 18395]
Length = 191
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y G RHN +GF + D A+ G A +G + A +L KP
Sbjct: 9 LIVGLGNPGPRYAGNRHN-IGFLVADELADRIGGKFKAHKAGAEVVEGRLAGARAVLVKP 67
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+++MNLSG +YK P ++V HD++ LP G +RL+ GG GHNGL+S+ +
Sbjct: 68 RSFMNLSGGPVAGAVKFYKAPPESLIVIHDELDLPFGTIRLKRGGGENGHNGLRSISKSL 127
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G R++ R+R GIGRPPG+MDP ++L+ F+ R+ + + + ++ L++KGL +
Sbjct: 128 -GTRDYVRVRFGIGRPPGRMDPADYVLKDFSGTERKELAYFIDVCADAVEALVTKGLEAA 186
Query: 200 ARHFN 204
F+
Sbjct: 187 QNQFH 191
>gi|294629796|ref|ZP_06708356.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
gi|292833129|gb|EFF91478.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
Length = 203
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
++ + PWL VGLGNPG +Y RHN VGF + D A+ G +A +G +G
Sbjct: 7 VSSASDPWLIVGLGNPGPEYAMNRHN-VGFMVADLLADRMGGRFKRAGKAQAQVVEGRIG 65
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
V+LAKP +YMNLSG L +YK+PL+ V+ HD++ + GVLRL+ GG
Sbjct: 66 PPGPASRRVVLAKPMSYMNLSGGPVNALRDFYKVPLDHVVAVHDELDIDYGVLRLKRGGG 125
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 126 DNGHNGLKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAA 183
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ LL++GL + +N+
Sbjct: 184 DAVECLLAEGLERAQSAYNS 203
>gi|196250766|ref|ZP_03149453.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
gi|196209716|gb|EDY04488.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
Length = 186
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN +GF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHN-IGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL +Y + ++ V++ +DD+ LP G +RLR GG GGHNG+KS++++
Sbjct: 62 LTYMNLSGECVCPLIDFYDIAVDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRP ++L +F + + A+ + + ++ +
Sbjct: 122 -GTEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEKPVVMEAVLRAADACEQAVTTPFIQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNDFN 185
>gi|383754964|ref|YP_005433867.1| putative peptidyl-tRNA hydrolase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367016|dbj|BAL83844.1| putative peptidyl-tRNA hydrolase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 209
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 103/183 (56%), Gaps = 21/183 (11%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y T+HN VGF ++DA A+ GI A QGF+G +LL KP
Sbjct: 3 IIAGLGNPGSEYAATKHN-VGFMLVDALADKLGIDNWQDKFDAKVAQGFIGTEKILLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + GPL +YKL ++V HDDM +P G +R+R G GGHNG+KSV+ +
Sbjct: 62 LTYMNESGRAIGPLLNFYKLDAEDLIVVHDDMDIPAGTVRIRKKGSAGGHNGIKSVLAHL 121
Query: 140 RGNREFARLRIGIGRP-PG-------------QMDPKA-----FLLQKFNAIARERIDTA 180
G+ FAR+RIGIGRP PG + PK +LL I E +D A
Sbjct: 122 -GDEHFARVRIGIGRPLPGWTVVNHVLAPFIDEDKPKIKEAIHYLLPAVECIVTEDVDMA 180
Query: 181 LQE 183
+ +
Sbjct: 181 MNK 183
>gi|308171944|ref|YP_003918649.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|384157666|ref|YP_005539739.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens TA208]
gi|384162459|ref|YP_005543838.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens LL3]
gi|384166681|ref|YP_005548059.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens XH7]
gi|307604808|emb|CBI41179.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|328551754|gb|AEB22246.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens TA208]
gi|328910014|gb|AEB61610.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens LL3]
gi|341825960|gb|AEK87211.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens XH7]
Length = 188
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHN-VGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 122 -GTPEFDRVRIGIGRPANGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|403382802|ref|ZP_10924859.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JC66]
Length = 187
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
+GLGNPG Y TRHN VGF ID A GI ++ CKA G+G V V L KPQ
Sbjct: 4 LIGLGNPGAAYAKTRHN-VGFMAIDQIAREWGIDVSQKKCKALIGEGNVRGTKVWLIKPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGES YYK+ L + V +DD+ P G RLR+ GG GGHNG+KS++ +
Sbjct: 63 TYMNLSGESLRAFLDYYKIELENITVLYDDLDTPFGKFRLRYQGGAGGHNGIKSIIQH-T 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G + F R+RIGI RP + ++L F+ + + L++ + +K L ++
Sbjct: 122 GTQVFNRIRIGISRPAPGYNIADYVLSPFSKEEFQSLPEVLEQIQKAVKYDLEHTFEQTM 181
Query: 201 RHFN 204
FN
Sbjct: 182 AAFN 185
>gi|110803012|ref|YP_699741.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
gi|119390928|sp|Q0SQ66.1|PTH_CLOPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110683513|gb|ABG86883.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
Length = 188
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF++ID A I +N K G+GF+ + V+L KP
Sbjct: 3 LIVGLGNPGKQYEKTRHN-IGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES +YKL + ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 LTYMNLSGESIREFVNFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G++ F R+++G+G+P + +L KF+ RE I+ + + + ++ ES
Sbjct: 122 GGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKES 178
Query: 200 ARHFNTIQ 207
FN +
Sbjct: 179 MNKFNGVN 186
>gi|381210581|ref|ZP_09917652.1| peptidyl-tRNA hydrolase [Lentibacillus sp. Grbi]
Length = 186
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY TRHN VGF +ID A G + ++L +PQ
Sbjct: 4 IVGLGNPGKKYVKTRHN-VGFMVIDELAGRNGWKLKKDKFSGKSTVETSEGEKIILLQPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T+MNLSGES PL +Y++ +LV DD+ LP G +RLR GGHGGHNG++S++++
Sbjct: 63 TFMNLSGESVRPLMNFYQMKPEDILVIFDDLDLPTGKIRLRQKGGHGGHNGIRSIIDHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +EF RLRIGIGRP + ++L+ F+ +E + +++++ + + K E
Sbjct: 122 GTKEFNRLRIGIGRPDTAVPVVDYVLKPFSKAQQEDVQSSIEKSANACETWMQKPFAEVM 181
Query: 201 RHFNT 205
FN+
Sbjct: 182 NDFNS 186
>gi|410726039|ref|ZP_11364299.1| peptidyl-tRNA hydrolase [Clostridium sp. Maddingley MBC34-26]
gi|410601471|gb|EKQ55982.1| peptidyl-tRNA hydrolase [Clostridium sp. Maddingley MBC34-26]
Length = 191
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 8/175 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GF++ID A I +N K +G+GF+ V+L K
Sbjct: 2 FLIVGLGNPGKEYEDTRHN-IGFKVIDNIAREYNIELNRQKFKGIYGEGFIEGKKVMLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +Y L +LV +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 61 PATYMNLSGESIREVVDFYNLDNTEILVIYDDISLEVGTLRIREKGSAGGHNGIKSIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKF----NAIARERIDTALQEGVEVLK 189
G+ F+R+++G+G+P G D ++L KF I + I+ + + E++K
Sbjct: 121 L-GSDVFSRIKVGVGQPKG--DLIKYVLGKFTKEETVILNQVIEVSTKATAEIIK 172
>gi|336425952|ref|ZP_08605966.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336011417|gb|EGN41377.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 194
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+ TRHN VGF++IDA A+ GI + KA G+G++ V+LAK
Sbjct: 2 YIIAGLGNPKREYENTRHN-VGFDVIDALADKYGIRVIERKHKALVGRGYIDGMKVVLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQT+MNLSGES + YYK+ P ++V DD+ L G LR+R G GGHNGLK+++
Sbjct: 61 PQTFMNLSGESIREIIDYYKVDPQTELIVVCDDISLDLGQLRIRKKGSAGGHNGLKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G FAR+++G+G P D ++L F R+ +D + VE ++ KG
Sbjct: 121 HL-GTDGFARIKMGVGNKPEGYDLADYVLGHFTGGERKIMDECIALAVEAAVTMMEKGPD 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 EAMNRFN 186
>gi|148655155|ref|YP_001275360.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
gi|166229447|sp|A5US07.1|PTH_ROSS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148567265|gb|ABQ89410.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
Length = 217
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPGD Y TRHN +GF ++ A+ + A +G + V LA
Sbjct: 2 WLIVGLGNPGDTYARTRHN-IGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALAL 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSG++ L +YK+ P +LV +DD+ LP GVLRLR G G HNG++S++
Sbjct: 61 PQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSII- 119
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G++ F RLRIGI RPP D ++L +F ++ +Q+ + L+ ++ +G+
Sbjct: 120 TLLGSQVFPRLRIGIDRPPPAWDLADYVLGRFTPEQEAQLPDIMQKAADALETVVREGMA 179
Query: 198 ESARHFN 204
+ N
Sbjct: 180 VAMNRIN 186
>gi|238019603|ref|ZP_04600029.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
gi|237863801|gb|EEP65091.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
Length = 192
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ T+HN +GF +IDA A+S + +A V VLL KP
Sbjct: 3 LVVGLGNPGKQYEATKHN-IGFMVIDAIADSVPHTPWKEEQRAEVCSITVDGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SGES GPL YYK+ + V +DDM LP G LR+R NG GGHNG+KS++++
Sbjct: 62 QTFMNASGESVGPLMRYYKIDPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLISHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R R+GIGRP Q +L F+ ++E++ +++ V+ + L G+ +
Sbjct: 122 -GTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKG 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNLFN 185
>gi|147669215|ref|YP_001214033.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
gi|452203439|ref|YP_007483572.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi DCMB5]
gi|189038288|sp|A5FRL3.1|PTH_DEHSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146270163|gb|ABQ17155.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
gi|452110498|gb|AGG06230.1| peptidyl-tRNA hydrolase [Dehalococcoides mccartyi DCMB5]
Length = 189
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG +Y G RHN VGF+ + FA+ IS + C + G G + D ++LAKP
Sbjct: 3 LIIGLGNPGKEYSGNRHN-VGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L Y L ++V DD+ LP G LRLR G GGHNG+ S++ +
Sbjct: 62 QTYMNLSGKAVNQLLRRYNLKAADIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIITDI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G +EF RL+IGIG+P + + +L F RE I+TA+ E L L++ GL
Sbjct: 122 -GTKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREIIETAIARAAEALACLITSGL 180
Query: 197 TESARHFNT 205
++ FN
Sbjct: 181 DTASNRFNC 189
>gi|326390844|ref|ZP_08212396.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
gi|325993103|gb|EGD51543.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
Length = 184
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 112/186 (60%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+GTRHN +GF +ID A+ G+++ + K+ G+G ++L K
Sbjct: 2 YVIAGLGNPGKEYEGTRHN-IGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+KS++
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIPLENVIVIYDDKDLDVGKIRIRTKGSSGGHNGMKSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ EF R+RIGIG+P Q D + +L KF ++ ID A+ + + + ++ G+
Sbjct: 120 LLNSEEFPRVRIGIGKP--QEDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 199 SARHFN 204
S FN
Sbjct: 178 SMSKFN 183
>gi|323701606|ref|ZP_08113278.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
gi|333922333|ref|YP_004495913.1| peptidyl-tRNA hydrolase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533379|gb|EGB23246.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
gi|333747894|gb|AEF93001.1| Peptidyl-tRNA hydrolase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 200
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 111/188 (59%), Gaps = 6/188 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GF +IDA A GI + KA GQ ++G ++LAKP
Sbjct: 3 LIVGLGNPGPEYAKTRHN-IGFMVIDALARDLGIVVEKNQHKALTGQAYLGREKLILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L +YKL +LV +DDM LP G LR+R +G GG G+KS++
Sbjct: 62 QTYMNLSGQAVVALMNWYKLQPVDLLVIYDDMDLPPGRLRIRQSGSAGGQKGMKSII-EL 120
Query: 140 RGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R+++GIGRP G +D +L K + I+ A+ VE K+ + G
Sbjct: 121 LGTQEFTRMKVGIGRPEHGAID---HVLGKIDDQEAALINPAIMAAVEAAKVWVLDGAPA 177
Query: 199 SARHFNTI 206
+ FN +
Sbjct: 178 AMNKFNRV 185
>gi|325678539|ref|ZP_08158150.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
gi|324109758|gb|EGC03963.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
Length = 208
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 114/194 (58%), Gaps = 3/194 (1%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA 72
T ++ VGLGNPG +Y G+RHN GF +DA + G S KA G +G
Sbjct: 17 TGTKPEYIIVGLGNPGIQYDGSRHN-AGFITVDALEKKLGFSCERRKFKAKVGNTVIGGK 75
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
L+ KP+T+MNLSG++ +YK+P+ V+V DD+ L G LR+R G GGHNG+
Sbjct: 76 NCLVMKPETFMNLSGDAVSEAMDFYKIPIENVIVIFDDISLEPGQLRIRRKGSAGGHNGI 135
Query: 133 KSVMNNFRGNREFARLRIGIGRPPG-QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
KS++ G+ +F R+++G+G+ P D ++L +F+ R++ID A ++ + L+L+
Sbjct: 136 KSIIAQC-GSEDFPRIKLGVGKKPNPAYDLAKWVLGRFSEDDRKKIDIAAEKACDALELM 194
Query: 192 LSKGLTESARHFNT 205
++ + E+ FN+
Sbjct: 195 VNGKIDEAMSRFNS 208
>gi|345858300|ref|ZP_08810697.1| peptidyl-tRNA hydrolase [Desulfosporosinus sp. OT]
gi|344328616|gb|EGW39997.1| peptidyl-tRNA hydrolase [Desulfosporosinus sp. OT]
Length = 185
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 113/189 (59%), Gaps = 6/189 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN +GF +ID AE+ + T + + +G V ++L KP
Sbjct: 3 VIVGLGNPGPQYAETRHN-IGFLLIDLLAEAYNLQFRT-KFQGLWTEGNVEGERLILLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S L +YK+ +L+ HDDM LP G +RLR GG GGHNG++S++ +
Sbjct: 61 QTFMNLSGRSVSELTNFYKVLGGDLLIVHDDMDLPLGKIRLRDQGGAGGHNGIRSILAEY 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ +F RL++G+GRPP + DP ++L F ++D L+ +V L + KG ES
Sbjct: 121 -GSEKFWRLKLGVGRPPREWDPARYVLSPFAEDELTQLDDLLERAEKVTNLWI-KG--ES 176
Query: 200 ARHFNTIQK 208
R N +
Sbjct: 177 GRAMNLYHR 185
>gi|329925502|ref|ZP_08280376.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
gi|328939785|gb|EGG36125.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
Length = 187
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG Y+ TRHN VGF +DA AE G+ N CK+ +G +G +L K
Sbjct: 3 WI-VGLGNPGPNYEKTRHN-VGFMALDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSGE+ YYK+ L ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKVSLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F RE++ ++E + L+ L +
Sbjct: 121 -TGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQHMVEETCDALEFSLDHTFEQ 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|167629343|ref|YP_001679842.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
gi|167592083|gb|ABZ83831.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
Length = 225
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG +Y TRHN +GF ++D AE+ G + + V VLL KPQ
Sbjct: 31 IVGLGNPGLQYARTRHN-IGFMVVDRLAEAWGAEGFRDRFQGLCSEARVEGEKVLLLKPQ 89
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSG+S LA +YKL +LV +DDM L G LR R GG GGHNG+KS++
Sbjct: 90 TYMNLSGQSVAALAVFYKLLPEDILVIYDDMDLKLGRLRARAKGGSGGHNGMKSII-GLL 148
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G F RL++GIGRP + A +L+ F +E + L +G E L + KG+ E
Sbjct: 149 GTEAFPRLKMGIGRPADRRLAAAHVLESFTEEEQETVRAMLDQGREAAALWVDKGIIEVM 208
Query: 201 RHFNT 205
FN
Sbjct: 209 NRFNA 213
>gi|455645250|gb|EMF24311.1| peptidyl-tRNA hydrolase [Streptomyces gancidicus BKS 13-15]
Length = 198
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 111/197 (56%), Gaps = 9/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP 73
A PWL GLGNPG Y RHN VGF + D AE G +A +G +G A
Sbjct: 5 AAGPWLVAGLGNPGPGYAMNRHN-VGFMVADLLAERMGGRFKRAAKAQAQVVEGRIGPAG 63
Query: 74 -----VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 128
V+L KP +YMNLSG L +YK+P RV+ HD++ + G LRL+ GG G
Sbjct: 64 PGSRRVVLVKPMSYMNLSGGPVNALREFYKVPAQRVVAVHDELDIDYGTLRLKLGGGDNG 123
Query: 129 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
HNGLKS+ F RE+ R+R GIGRPPG+M F+L+ F++ R+ +D + + +
Sbjct: 124 HNGLKSLTGAF--GREYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRTADAV 181
Query: 189 KLLLSKGLTESARHFNT 205
+ L+++GL + +N+
Sbjct: 182 ECLVTEGLERAQSAYNS 198
>gi|326790210|ref|YP_004308031.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
gi|326540974|gb|ADZ82833.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
Length = 190
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GFE+ID+ AE+ I + KA G+ + V+L KP
Sbjct: 3 LIVGLGNPGLQYAATRHN-IGFEVIDSLAEAYNIQVTKSKYKALIGEANIKGERVILMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGE+ ++K+ V V DD+ L G LRLR NG GGHNG+KS++ +
Sbjct: 62 QTYMNLSGEAVRACMDFHKITNEEVFVIFDDVSLEVGQLRLRKNGSAGGHNGIKSIIAHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G ++F+RL+ G+G P D ++L +F+ + I ++ V+ + ++ G+ ++
Sbjct: 122 -GTQDFSRLKFGVGEKPAGWDLANYVLGRFSEDDLKIIGPRFKDAVDATTMFVTDGIDKA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNKYN 185
>gi|297200253|ref|ZP_06917650.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
gi|197716993|gb|EDY61027.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
Length = 200
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 114/200 (57%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
T PWL VGLGNPG +Y G RHN VGF + D AE G +A +G +G
Sbjct: 4 STPANAPWLIVGLGNPGPEYAGNRHN-VGFMVADLLAERVGGRFKRAGKAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
+ V+LAKP ++MNLSG L +YK+P+ ++ HD++ + GVLRL+ GG
Sbjct: 63 PPGPANRRVVLAKPMSFMNLSGGPVNALKDFYKVPVANIVAIHDELDIDYGVLRLKLGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ F E+ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 123 DNGHNGLKSMTKAF--GAEYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 181 DAVEALVIEGLERAQSTYNS 200
>gi|375360744|ref|YP_005128783.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385267079|ref|ZP_10045166.1| peptidyl-tRNA hydrolase [Bacillus sp. 5B6]
gi|421729451|ref|ZP_16168583.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451348557|ref|YP_007447188.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens IT-45]
gi|452854116|ref|YP_007495799.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|371566738|emb|CCF03588.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385151575|gb|EIF15512.1| peptidyl-tRNA hydrolase [Bacillus sp. 5B6]
gi|407076695|gb|EKE49676.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449852315|gb|AGF29307.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens IT-45]
gi|452078376|emb|CCP20126.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 188
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHN-VGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 122 -GTPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|218248401|ref|YP_002373772.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|257061467|ref|YP_003139355.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
gi|218168879|gb|ACK67616.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|256591633|gb|ACV02520.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
Length = 202
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 119/194 (61%), Gaps = 4/194 (2%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-G 70
TA+ P L +GLGNP KY TRHN +GFE+IDA AE+ +S+ + F +G G
Sbjct: 5 TALTIPQLIIGLGNPEVKYDKTRHN-IGFEVIDALAETWQLSLKENRRFQGLFAEGMARG 63
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
+ + L KP TYMN SG+S ++ +YKL N +LV +DDM LP G +R+R G GGHN
Sbjct: 64 NHKIYLLKPLTYMNRSGQSVRAVSDWYKLYPNSMLVIYDDMDLPVGRMRMRLEGSAGGHN 123
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
G+KS++++ G+++F RLR+GIG+ + + +L KF +E I L V+ +++
Sbjct: 124 GMKSIISHV-GSQDFPRLRLGIGKSNQSKETISHVLGKFAPQEQEIIAKVLSLAVDAVEM 182
Query: 191 LLSKGLTESARHFN 204
L +G+ ++ +N
Sbjct: 183 SLKEGVAKAMSLYN 196
>gi|159896843|ref|YP_001543090.1| aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus DSM 785]
gi|229485507|sp|A9B7I9.1|PTH_HERA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|159889882|gb|ABX02962.1| Aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus DSM 785]
Length = 206
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG+KY RHN VGF+ + FA +S + A +G V V LA+
Sbjct: 2 FLIVGLGNPGEKYLNNRHN-VGFQCVAEFARRHHLSFDGKRSDARIAEGLVNGQRVALAR 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQT+MN SG+S L +YK+ P + +LV +DD+ LP G ++LR+ G GG G+ S++
Sbjct: 61 PQTFMNDSGKSVVGLVNWYKIDPASELLVVYDDLDLPFGTIKLRNQGSSGGQRGMNSIIQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G ++FARLR GIGRPP + F+L +NA RE + VE +L LS G+T
Sbjct: 121 -LLGTQKFARLRFGIGRPPEGWEVINFVLGNWNAAERETLPKLYDRAVEACELCLSDGVT 179
Query: 198 ESARHFN 204
++ N
Sbjct: 180 KAMNAVN 186
>gi|77164044|ref|YP_342569.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|254435162|ref|ZP_05048669.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
gi|119390970|sp|Q3JDQ7.1|PTH_NITOC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76882358|gb|ABA57039.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|207088273|gb|EDZ65545.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
Length = 193
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 18/192 (9%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP----- 73
WL +GLGNPG +Y TRHN GF +DAFA GI+ G F GD
Sbjct: 6 WLLIGLGNPGTEYAQTRHN-AGFWWLDAFASELGINFKP-------GAKFFGDYARANWR 57
Query: 74 ---VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
+ L KP T+MN SG++ L YY++PL +L+ HDD+ LP GV +L+ GGHGGHN
Sbjct: 58 GHDLWLLKPATFMNRSGQAVLALLNYYQIPLEHLLIAHDDLDLPPGVAKLKRAGGHGGHN 117
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GL+ ++N G R+F RLR+G+G P D +++L + + R+ I+ A+ G+EVL
Sbjct: 118 GLRDIINRL-GRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIEAAIGAGLEVLPE 176
Query: 191 LLSKGLTESARH 202
+L+ G E A H
Sbjct: 177 VLA-GEMEKAMH 187
>gi|254423495|ref|ZP_05037213.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
gi|196190984|gb|EDX85948.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
Length = 220
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 116/197 (58%), Gaps = 8/197 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAES-QGISMN-TVHCKATFGQGFVGD 71
V RP L VGLGNPG KY+ TRHN +GFE+IDA A S +S+ + G+ +
Sbjct: 20 TVVRPRLIVGLGNPGTKYERTRHN-IGFEIIDALANSFSNVSLTPNKRFQGATGEFWSAG 78
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+L KP TYMN SG++ + +YKL VLV +DDM LP G LR+R +GG GGHNG
Sbjct: 79 ERVVLLKPTTYMNRSGQAVRAVLDWYKLEPTAVLVIYDDMDLPTGRLRMRLSGGAGGHNG 138
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPK----AFLLQKFNAIARERIDTALQEGVEV 187
+KS++++ G +EF RLR+G+G D + +L +F+ R+ +D + V+
Sbjct: 139 MKSIISHL-GTKEFPRLRVGVGSADKSGDRDGAVVSHVLGRFSPSDRKIVDAVIPMAVDA 197
Query: 188 LKLLLSKGLTESARHFN 204
+ L L KG+ S +N
Sbjct: 198 VDLSLRKGVERSMNLYN 214
>gi|302534902|ref|ZP_07287244.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
gi|302443797|gb|EFL15613.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
Length = 197
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 113/195 (57%), Gaps = 8/195 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----- 70
A PWL VGLGNPG +Y G RHN +GF + D AE G +A +G +G
Sbjct: 6 AAPWLIVGLGNPGAEYAGNRHN-IGFMVADLLAERIGGKFKAHKARAQVVEGRMGPPGPL 64
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
+ V++AKP ++MNLSG L +YK+PL R++ HD++ + LRL+ GG GHN
Sbjct: 65 NRRVVIAKPLSFMNLSGGPVTALRDFYKVPLERIVAVHDELDIDYATLRLKLGGGDNGHN 124
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GLKS+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++
Sbjct: 125 GLKSMTKSM--GADYHRVRCGIGRPPGRMQVADFVLRDFSSTERKELDWFVDRSADAVEC 182
Query: 191 LLSKGLTESARHFNT 205
L+ +GL + +N+
Sbjct: 183 LVQEGLERAQSAYNS 197
>gi|394994187|ref|ZP_10386915.1| peptidyl-tRNA hydrolase [Bacillus sp. 916]
gi|393804963|gb|EJD66354.1| peptidyl-tRNA hydrolase [Bacillus sp. 916]
Length = 188
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHN-VGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 122 -GTPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVTKTVKACEASLTKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|337751798|ref|YP_004645960.1| protein Pth [Paenibacillus mucilaginosus KNP414]
gi|336302987|gb|AEI46090.1| Pth [Paenibacillus mucilaginosus KNP414]
Length = 186
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
FVGLGNPG +Y+ TRHN +G+ +D FA+ GI ++ CK G+G V V L KPQ
Sbjct: 4 FVGLGNPGRQYEATRHN-IGWMALDRFADKHGIQISQNKCKGLLGEGHVAGQKVYLLKPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T+MNLSGES +YK L ++V +DDM P G +RLR+ G GGHNG+KS + +
Sbjct: 63 TFMNLSGESIRAFMDFYKASLEDLVVIYDDMDTPFGSIRLRYQGSAGGHNGIKSTIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G + F R+R+GI RP + ++L F+ + I L E ++ LL ++
Sbjct: 122 GTQSFQRIRMGISRPLPGRNIADYVLSTFSKEEVQGIPPVLDRTCEAMEHLLQHPFEKTM 181
Query: 201 RHFNT 205
FN
Sbjct: 182 AVFNV 186
>gi|379724736|ref|YP_005316867.1| protein Pth [Paenibacillus mucilaginosus 3016]
gi|386727490|ref|YP_006193816.1| protein Pth [Paenibacillus mucilaginosus K02]
gi|378573408|gb|AFC33718.1| Pth [Paenibacillus mucilaginosus 3016]
gi|384094615|gb|AFH66051.1| protein Pth [Paenibacillus mucilaginosus K02]
Length = 186
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
FVGLGNPG +Y+ TRHN +G+ +D FA+ GI ++ CK G+G V V L KPQ
Sbjct: 4 FVGLGNPGRQYEATRHN-IGWMALDRFADKHGIQISQNKCKGLLGEGHVAGQKVYLLKPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T+MNLSGES +YK L ++V +DDM P G +RLR+ G GGHNG+KS + +
Sbjct: 63 TFMNLSGESIRAFMDFYKASLEDLVVIYDDMDTPFGSIRLRYQGSAGGHNGIKSTIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G + F R+R+GI RP + ++L F+ + I L E ++ LL ++
Sbjct: 122 GTQSFQRIRMGISRPLPGRNIADYVLSTFSKEEVQGIPPVLDRTCEAMEHLLQHPFEKTM 181
Query: 201 RHFNT 205
FN
Sbjct: 182 AVFNA 186
>gi|354585793|ref|ZP_09004624.1| peptidyl-tRNA hydrolase [Paenibacillus lactis 154]
gi|353184118|gb|EHB49646.1| peptidyl-tRNA hydrolase [Paenibacillus lactis 154]
Length = 187
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG Y+ TRHN VGF +DA AE G+ N CK+ +G +G +L K
Sbjct: 3 WI-VGLGNPGPAYEKTRHN-VGFMALDALAERHGMKFNQSKCKSVIAEGMIGGTKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSGE+ YYK PL ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKAPLEDMIVVYDDLDTAVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F RE++ + + + L+ L +
Sbjct: 121 -TGTQTFNRVRMGISRPEPGYAIVDYVLGAFPKGEREQLQSMVDMTCDALEFSLDHTFEQ 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|302560228|ref|ZP_07312570.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
gi|302477846|gb|EFL40939.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
Length = 202
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 111/194 (57%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDA---- 72
PWL VGLGNPG +Y RHN VGF + D AE G +A +G +G
Sbjct: 12 PWLIVGLGNPGPEYAMNRHN-VGFMVADLLAERIGARFKRAGKAQAQVLEGRIGPPGPAG 70
Query: 73 -PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP +YMNLSG L +YK+P+ RV+ HD++ + G LRL+ GG GHNG
Sbjct: 71 RRVVLAKPMSYMNLSGGPVNALREFYKVPVERVVAVHDELDIDYGTLRLKLGGGDNGHNG 130
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ F R++ R+R GIGRPPG+M F+L+ F + R+ +D + + ++ L
Sbjct: 131 LKSMTKAF--GRDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYFVDRAADAVECL 188
Query: 192 LSKGLTESARHFNT 205
+ +GL + +N+
Sbjct: 189 VIEGLERAQGTYNS 202
>gi|227832719|ref|YP_002834426.1| peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453735|gb|ACP32488.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 182
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 111/182 (60%), Gaps = 6/182 (3%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVG 70
+ + P+L VGLGNPG KY GTRHN +GF++ D A S +VH K + G
Sbjct: 3 SVTSSPFLVVGLGNPGPKYTGTRHN-IGFDVADELAHELFASF-SVHKKTNTDVAEARRG 60
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
DA V++AKP+++MNLSG LA Y+ +P + ++V HD++ L ++ R GG GHN
Sbjct: 61 DAKVIVAKPRSFMNLSGGPIKALAQYFNVPHDHIIVVHDELELDFATIKRRLGGGDHGHN 120
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLK 189
GL+S + G +++ RL +GIGRPPG+MDP AF+L+ +N + I + V E+L+
Sbjct: 121 GLRSTTKSL-GTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEILR 179
Query: 190 LL 191
L
Sbjct: 180 AL 181
>gi|261403913|ref|YP_003240154.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
gi|261280376|gb|ACX62347.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
Length = 187
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG Y+ TRHN VGF +DA AE G+ N CK+ +G +G +L K
Sbjct: 3 WI-VGLGNPGPNYEKTRHN-VGFMALDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSGE+ YYK+ L ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKVSLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F RE++ ++E + L+ L +
Sbjct: 121 -TGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQHMVEETCDALEFSLGHTFEQ 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|238926854|ref|ZP_04658614.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
gi|238885386|gb|EEQ49024.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
Length = 208
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 2/191 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y T+HN VGF +IDA AE +S ++ + +G + L KP
Sbjct: 3 LIAGLGNPGAEYANTKHN-VGFMLIDALAEHLNVSAWKEDFSSSVAEARIGGEKIFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGE+ GP+ +YYKL ++V HDDM +P G +R+R G GGHNG+KS++++
Sbjct: 62 LTYMNNSGEAIGPMLSYYKLSSEDLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILSHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ FAR+RIGIGRPP +L F +I + + + +++ G +
Sbjct: 122 -GSEAFARVRIGIGRPPAGWTVINHVLAPFAPEDTPKIRETIAYLLPAVTCIVTDGTDFA 180
Query: 200 ARHFNTIQKYK 210
+N +K K
Sbjct: 181 MNRYNPHRKKK 191
>gi|403508638|ref|YP_006640276.1| peptidyl-tRNA hydrolase [Nocardiopsis alba ATCC BAA-2165]
gi|402803467|gb|AFR10877.1| peptidyl-tRNA hydrolase [Nocardiopsis alba ATCC BAA-2165]
Length = 211
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 116/187 (62%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG KY G RHN GF ++DA A +G A + + A V+LAK
Sbjct: 25 WLVVGLGNPGPKYAGNRHN-AGFMVVDALAADKGERWKAHKANADVVETRIDGASVVLAK 83
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+T+MN+SG LA +YK+P+ R++V HD+M + G L+L+ GG GGHNGLKS +
Sbjct: 84 PRTFMNVSGGPIAGLAKFYKVPMERIVVVHDEMDIDYGALKLKRGGGSGGHNGLKSTTAS 143
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G ++ R+R G+GRPPG+MDP +L+ F++ R ++ ++ + ++ +L++GL
Sbjct: 144 LSGP-DYLRVRFGVGRPPGRMDPAVHVLRDFSSTERPELELNVERAADAVRTILTEGLGR 202
Query: 199 SARHFNT 205
+ F+T
Sbjct: 203 AQNVFHT 209
>gi|20808916|ref|NP_624087.1| peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
gi|22095992|sp|Q8R757.1|PTH_THETN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|20517576|gb|AAM25691.1| Peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
Length = 185
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 112/186 (60%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+GTRHN VGF +IDA ++ GI ++ + K+ G+G V+L K
Sbjct: 2 YIIAGLGNPGKEYEGTRHN-VGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGE+ +YK+PL V+V +DD L G +R+R G GGHNG+ S++
Sbjct: 61 PQTFMNLSGEALYDAVNFYKIPLENVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +F R+RIGIG+P D +L +F+ ++ ID A++ E + ++ G+
Sbjct: 120 LLNSEDFPRVRIGIGKPE-DGDLVRHVLGRFSDEEKKVIDEAVERAAEAVIDIMENGIEH 178
Query: 199 SARHFN 204
+ FN
Sbjct: 179 AMSRFN 184
>gi|149182809|ref|ZP_01861271.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
gi|148849476|gb|EDL63664.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
Length = 185
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GFE+ID A+ +N K + V+L KP
Sbjct: 3 LIVGLGNPGSQYDHTRHN-IGFEVIDELAKRFDSPLNQSKFKGVYASVHHKGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL Y+ + ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGESIVPLMDYFDIDEEDLVVIYDDLDLPVGKIRLRQKGSPGGHNGMKSIIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G ++F R+R+GI RPP M ++L +F RE + ++ + + L K E
Sbjct: 122 -GTQQFNRIRVGIDRPPSGMKVPDYVLGRFTPEERETMQDVIKASADACEAWLEKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNSFN 185
>gi|443320067|ref|ZP_21049195.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 73106]
gi|442790219|gb|ELR99824.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 73106]
Length = 192
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 116/189 (61%), Gaps = 6/189 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFV-GDAPVL 75
P L +GLGNP KY TRHN +GF ++D A++ G+S + F +G G V
Sbjct: 3 PQLIIGLGNPEPKYLQTRHN-IGFMVLDTLAQAWGLSWQEEKRFQGLFSEGKARGGKKVY 61
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMNLSG+S + +YKLP + +LV +DD+ LP G LRLR +G GGHNG+KS+
Sbjct: 62 LLKPLTYMNLSGQSVRAVVDWYKLPTDSLLVVYDDLDLPVGRLRLRRSGSAGGHNGMKSI 121
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G ++F+RLRIGIG+ + + +L KF ++ ID ++ + VL+L L +G
Sbjct: 122 IAHL-GGQDFSRLRIGIGK--SNVPTISHVLGKFTPSEKKAIDEVMKVTIAVLELSLKEG 178
Query: 196 LTESARHFN 204
L ++ +N
Sbjct: 179 LDQAMNQYN 187
>gi|406573308|ref|ZP_11049060.1| peptidyl-tRNA hydrolase [Janibacter hoylei PVAS-1]
gi|404557240|gb|EKA62690.1| peptidyl-tRNA hydrolase [Janibacter hoylei PVAS-1]
Length = 193
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 117/181 (64%), Gaps = 2/181 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +Y G RHN VG +ID AE G + T A +G ++
Sbjct: 6 WLVVGLGNPGPQYAGNRHN-VGAMVIDHLAERAGARLRTHKAGAAAESVRLGSTRAIIGI 64
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P +YMNLSG T LA+++ +P R +V HD++ +P G +RL+ GG GGHNGL+S+ ++
Sbjct: 65 PSSYMNLSGGPTKGLASFFSVPPERTIVVHDELDIPFGEVRLKLGGGEGGHNGLRSITSS 124
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
F G +++ R+R+GIGRPPG+MD A++L+ F+A R+ + + + + ++LL+ KGLT+
Sbjct: 125 F-GTKDYLRVRVGIGRPPGRMDAAAYVLKDFSATERKELPFLVDDAADAVELLIDKGLTD 183
Query: 199 S 199
+
Sbjct: 184 A 184
>gi|291453573|ref|ZP_06592963.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|359149694|ref|ZP_09182663.1| peptidyl-tRNA hydrolase [Streptomyces sp. S4]
gi|421744064|ref|ZP_16182071.1| peptidyl-tRNA hydrolase [Streptomyces sp. SM8]
gi|291356522|gb|EFE83424.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|406687525|gb|EKC91539.1| peptidyl-tRNA hydrolase [Streptomyces sp. SM8]
Length = 195
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 10/194 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---- 73
PWL VGLGNPG +Y RHN VGF + D A G +A + +G AP
Sbjct: 6 PWLVVGLGNPGPEYAANRHN-VGFMVADLLASRAGGKFKAHKSRAQVLEARIG-APGPGS 63
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
++LAKPQ+YMNLSG L +YK+P R++ HD++ + G LRL+ GG GHNG
Sbjct: 64 RRIVLAKPQSYMNLSGGPVTALRDFYKVPTERIVAVHDELDIDYGALRLKLGGGDNGHNG 123
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L
Sbjct: 124 LKSMTKSL--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELDYFVDRAADAVEAL 181
Query: 192 LSKGLTESARHFNT 205
+ GL + +N
Sbjct: 182 VVAGLERAQSSYNA 195
>gi|429123607|ref|ZP_19184140.1| putative peptidyl-tRNA hydrolase [Brachyspira hampsonii 30446]
gi|426280440|gb|EKV57454.1| putative peptidyl-tRNA hydrolase [Brachyspira hampsonii 30446]
Length = 298
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPGD+YK RHN VGF +ID AE+ I+ + K+ + + + +L KP
Sbjct: 5 LIIGLGNPGDEYKNNRHN-VGFILIDKIAENFNINFDNNKKKSLYARSKENNIEYILLKP 63
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES ++ ++ + V+V +DDM +P G +++ G GGHNG+KS++++
Sbjct: 64 QTFMNLSGESAIFISKFFNIKPEDVIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHL 123
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG-VEVLKLLL 192
+ + +F R+RIGIGRP ++L F+ RE +DTA+ + ++ +K+ L
Sbjct: 124 QSD-DFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREELDTAIADDIIDAVKIAL 176
>gi|434388107|ref|YP_007098718.1| peptidyl-tRNA hydrolase [Chamaesiphon minutus PCC 6605]
gi|428019097|gb|AFY95191.1| peptidyl-tRNA hydrolase [Chamaesiphon minutus PCC 6605]
Length = 205
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVG-DAPVL 75
P L VGLGNPG KY TRHN +GF+ ID+ A+ IS+ + + +G+GF +A +
Sbjct: 8 PQLIVGLGNPGTKYAQTRHN-IGFDQIDSLAKRWQISLTDRKQFQGIYGEGFGSHNAKIR 66
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ KPQT+MNLSG+S ++KL VLV +DD+ LP G +RLR +G GGHNG+KS+
Sbjct: 67 MLKPQTFMNLSGQSVRATLDWFKLSPESVLVIYDDLDLPLGKIRLRLSGSAGGHNGMKSI 126
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+++ G ++F R+RIGIG G+ D + +L KF+AI + + + +++ L +G
Sbjct: 127 ISHL-GTQKFPRVRIGIGTSVGEKDTISHVLGKFSAIETPIVSEVIYLVNDAIEMSLKQG 185
Query: 196 LTESARHFNT 205
+ ++ +N+
Sbjct: 186 VEKAMSLYNS 195
>gi|403069020|ref|ZP_10910352.1| peptidyl-tRNA hydrolase [Oceanobacillus sp. Ndiop]
Length = 187
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 103/174 (59%), Gaps = 2/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY+ TRHN +GF +I+ S++ + V+L +P
Sbjct: 3 LIVGLGNPGRKYRQTRHN-IGFMVIEELLHRNQWSLDKAKFNGDYSMEHYEGEKVILLQP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGES PL YY L L+ VLV +DD+ LP G +RLR GGHGGHNG++S +++
Sbjct: 62 QTYMNLSGESIRPLMDYYNLDLDDVLVIYDDLDLPTGKIRLRQKGGHGGHNGVRSTIDHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +EF R+R+G+GRP G + ++L F +E + +++ + + L
Sbjct: 122 -GTKEFKRIRLGVGRPVGPIPVVDYVLGAFPKEEQEDVIISIKNAADACESWLK 174
>gi|296131719|ref|YP_003638966.1| peptidyl-tRNA hydrolase [Thermincola potens JR]
gi|296030297|gb|ADG81065.1| peptidyl-tRNA hydrolase [Thermincola potens JR]
Length = 187
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF +++ AE GI++N K+ FG+G + ++L KP
Sbjct: 3 LIVGLGNPGKEYEFTRHN-IGFLVLEQLAEKWGIAVNKNRFKSLFGEGIFQEDKIVLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG++ +YKL +LV +DDM LP G LRLR +GG GGH G++S++
Sbjct: 62 QTFMNLSGQAVLDAVRFYKLESTDILVIYDDMDLPTGRLRLRKSGGAGGHRGMESII-YL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
F RLRIGIG+P D +L +F RER+ A+ + V ++L+L +G+ ++
Sbjct: 121 LNTENFPRLRIGIGKPGPDKDAVQHVLGRFGEEERERVVAAVSKAVAAVELVLKEGVEKA 180
Query: 200 ARHFN 204
N
Sbjct: 181 MNTVN 185
>gi|289579381|ref|YP_003478008.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
gi|289529094|gb|ADD03446.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
Length = 189
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 113/190 (59%), Gaps = 4/190 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+ TRHN +GF +ID A+ GI++ + K+ G+ + ++L K
Sbjct: 2 FIIAGLGNPGIEYEQTRHN-IGFMVIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+ S++
Sbjct: 61 PQTFMNSSGEALYEAVNFYKIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ EF R+RIGIG+P Q D + +L KF ++ ID A+ + + + ++ G+
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 199 SARHFNTIQK 208
+ FN +QK
Sbjct: 178 AMSKFNGLQK 187
>gi|154684572|ref|YP_001419733.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens FZB42]
gi|166199305|sp|A7Z0H6.1|PTH_BACA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154350423|gb|ABS72502.1| SpoVC [Bacillus amyloliquefaciens FZB42]
Length = 188
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHN-VGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE P+ YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPILDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 122 -GTPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|288554662|ref|YP_003426597.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
gi|288545822|gb|ADC49705.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
Length = 185
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY GTRHN +GF++ID A+ G+ ++ K +G + V KP
Sbjct: 3 VVVGLGNPGAKYAGTRHN-IGFDIIDYCAKELGVELDQAKFKGVYGTKVINGEKVFFLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL Y+ + + ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGESVRPLLDYFNIDIEDLVVIYDDLDLPAGKIRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+R+GI RP ++L ++ RE ++ ++ + + ++ K E
Sbjct: 122 -GTDKFKRIRVGIDRPKNGEPIVNYVLGTYHPDEREAVNESIVQAAKAVEAWTEKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNQFN 185
>gi|158338610|ref|YP_001519787.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
gi|158308851|gb|ABW30468.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
Length = 206
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 6/191 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAP-VL 75
P L VGLGNPG KY TRHN +GF ID A+ IS+ + + +G+G G V
Sbjct: 8 PELIVGLGNPGSKYDRTRHN-IGFAFIDRLAQHWQISLTSERRFQGEYGEGLGGQGRRVR 66
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG+S + ++KL VLV +D+M LP G LRLR G GGHNG++S+
Sbjct: 67 LLKPHTYMNNSGQSIRAVIDWFKLEPTSVLVIYDEMALPVGKLRLRLKGSAGGHNGMRSI 126
Query: 136 MNNFRGNREFARLRIGIGRPPGQ--MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
+++ G E RLRIGIG PP + D +F+L +F + + + L GV+ +++ L
Sbjct: 127 ISHL-GTPEVPRLRIGIGSPPPERGKDTISFVLGRFAPLENQLLPAVLDLGVDAVEMALK 185
Query: 194 KGLTESARHFN 204
KG+ +S FN
Sbjct: 186 KGIEQSMTLFN 196
>gi|429503586|ref|YP_007184770.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485176|gb|AFZ89100.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 188
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF ID ++ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKTYENTRHN-VGFMAIDELSKEWNIELNKTKFNGLYGIGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLLDYYDADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I+ A+ + V+ + L+K E
Sbjct: 122 -GTPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|333373028|ref|ZP_08464947.1| aminoacyl-tRNA hydrolase [Desmospora sp. 8437]
gi|332971075|gb|EGK10045.1| aminoacyl-tRNA hydrolase [Desmospora sp. 8437]
Length = 197
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN +GF ++D AE I + KA G+G V V+L KP
Sbjct: 8 VIVGLGNPGIRYALTRHN-IGFWVVDRLAEEWKIPVEKERWKALVGEGRVNGEKVVLLKP 66
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+TYMNLSGES P + K + +LV +DD+ LP G +RLR G GGH G++S++++
Sbjct: 67 ETYMNLSGESVRPALEWLKCDVESLLVIYDDLDLPPGRIRLRMKGSAGGHRGVQSLVDHL 126
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R++IGIGRP + ++L +F E I A++ E ++ + E
Sbjct: 127 -GTQEFKRIKIGIGRPDVPIPIPDYVLSRFAREEEEPIAEAVERSAEAVQQWMEHPFPEV 185
Query: 200 ARHFNTIQ 207
FN Q
Sbjct: 186 MNRFNRNQ 193
>gi|417002113|ref|ZP_11941502.1| aminoacyl-tRNA hydrolase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479254|gb|EGC82350.1| aminoacyl-tRNA hydrolase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 193
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+ VGLGNPG KY+ TRHN GF ID A GI + K+ +GQG + V+L K
Sbjct: 2 YCIVGLGNPGLKYENTRHN-AGFLTIDYLANKFGIDVKKSKFKSLYGQGVISGQKVMLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMN SGE+ + +YK +++++V +DD+ + G +R+R G G HNG+KS++
Sbjct: 61 PQTYMNNSGEAVREIINFYKFDIDKLIVIYDDIDIEFGTIRIRKKGSAGTHNGMKSIIYQ 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ ++ F R++I +G+ P MD F+L F E I ++ + ++ ++ +
Sbjct: 121 IQDDK-FPRIKIAVGKKPEYMDLANFVLSGFTEKEAEVIREEIKLASDSIETMIESSIDM 179
Query: 199 SARHFNTIQ 207
S FN+++
Sbjct: 180 SMNKFNSVK 188
>gi|291546532|emb|CBL19640.1| peptidyl-tRNA hydrolase [Ruminococcus sp. SR1/5]
Length = 192
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG +Y+ TRHN +GF+ +D E I V A +G+G +G +L K
Sbjct: 2 YLIAGLGNPGKQYEATRHN-MGFDTVDCLVEKHNIPQGGVKFNAMYGKGIIGGEKAILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P +YMNLSG ++ Y+K+ P ++V +DD+ L G LR+R G GGHNG+K ++
Sbjct: 61 PLSYMNLSGGPIQEMSGYFKIDPETELIVIYDDIDLEPGQLRIRKKGSAGGHNGIKDIIR 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F R+R+G+G P D F+L F+ R+ +D + + E ++++LS+G+
Sbjct: 121 RL-GTEKFIRIRVGVGAKPKDWDLADFVLGHFSDSDRKLVDEGINDAAEAVEMILSEGVD 179
Query: 198 ESARHFN 204
+ +N
Sbjct: 180 AAMNKYN 186
>gi|262182792|ref|ZP_06042213.1| peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 179
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 110/180 (61%), Gaps = 6/180 (3%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDA 72
+ P+L VGLGNPG KY GTRHN +GF++ D A S +VH K + GDA
Sbjct: 2 TSSPFLVVGLGNPGPKYTGTRHN-IGFDVADELAHELFASF-SVHKKTNTDVAEARRGDA 59
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V++AKP+++MNLSG LA Y+ +P + ++V HD++ L ++ R GG GHNGL
Sbjct: 60 KVIVAKPRSFMNLSGGPIKALAQYFNVPHDHIIVVHDELELDFATIKRRLGGGDHGHNGL 119
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLL 191
+S + G +++ RL +GIGRPPG+MDP AF+L+ +N + I + V E+L+ L
Sbjct: 120 RSTTKSL-GTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEILRAL 178
>gi|197302597|ref|ZP_03167652.1| hypothetical protein RUMLAC_01326 [Ruminococcus lactaris ATCC
29176]
gi|197298495|gb|EDY33040.1| aminoacyl-tRNA hydrolase [Ruminococcus lactaris ATCC 29176]
Length = 192
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 117/191 (61%), Gaps = 3/191 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+GTRHN VGF++ID A I ++ +A G+G + V+LAK
Sbjct: 2 FIIAGLGNPTREYEGTRHN-VGFDVIDRLAVRYNIDVDVKKHRALIGKGMIAGQKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES + YYK+ P ++V +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESIRSILDYYKVDPETELIVIYDDISLDVGKLRIRAKGSAGGHNGIKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G F R+++G+G P + D ++L F+ +E ++ ++ V+ +++++S ++
Sbjct: 121 HV-GGPVFPRIKVGVGEKPPKYDLADYVLGHFSKAEQELMEEGYEDAVKAVEMIVSGDIS 179
Query: 198 ESARHFNTIQK 208
+ +N +K
Sbjct: 180 GAMNEYNRKKK 190
>gi|363890536|ref|ZP_09317863.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM5]
gi|363892231|ref|ZP_09319399.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM2]
gi|361964181|gb|EHL17225.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM2]
gi|361964912|gb|EHL17912.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium CM5]
Length = 187
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ T+HN VGF ID ++ I ++ + KA G+G ++L K
Sbjct: 2 YIIVGLGNPGLKYQNTKHN-VGFMAIDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + ++YK+ + V +DD+ + G LR+R G G HNG+K+++
Sbjct: 61 PQTFMNLSGESVQQIMSFYKVEHQNLFVLYDDIDIDVGKLRIRQKGSSGTHNGMKNII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R RIG+ +PP MD +++L F + + L + E + KGL +
Sbjct: 120 LLGYDDFPRFRIGVSKPPQYMDLASYVLSNFTSEETNILSDVLDKCSEACLYAIEKGLDK 179
Query: 199 SARHFN 204
S +N
Sbjct: 180 SMNKYN 185
>gi|297545522|ref|YP_003677824.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843297|gb|ADH61813.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 189
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 113/190 (59%), Gaps = 4/190 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+ TRHN +GF +ID A+ GI++ + K+ G+ + ++L K
Sbjct: 2 FIIAGLGNPGIEYEQTRHN-IGFMVIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE+ +YK+PL V++ +DD L G +R+R G GGHNG+ S++
Sbjct: 61 PQTFMNSSGEALYEAVNFYKIPLENVIIIYDDKDLDVGKIRIRKKGSSGGHNGMNSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ EF R+RIGIG+P Q D + +L KF ++ ID A+ + + + ++ G+
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 199 SARHFNTIQK 208
+ FN +QK
Sbjct: 178 AMSKFNGLQK 187
>gi|375091417|ref|ZP_09737710.1| peptidyl-tRNA hydrolase [Helcococcus kunzii ATCC 51366]
gi|374563517|gb|EHR34830.1| peptidyl-tRNA hydrolase [Helcococcus kunzii ATCC 51366]
Length = 191
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN VGF++ID A+ G+ ++ + K ++ Q + ++L K
Sbjct: 2 YLIVGLGNPGRQYEKTRHN-VGFDVIDKLADHFGVKLDKLKFKGSYAQVRYENEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+T+MN SGES P Y+ + ++V DD+ + G +R+R NG G HNGLKSV+N
Sbjct: 61 PETFMNASGESVQPFMNYFGIEPENLIVIVDDIDIKFGTVRIRANGSAGTHNGLKSVINR 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
N+ F R+++ + + P MD F+L KF R+ +D ++ + + +L +
Sbjct: 121 I-NNKNFTRIKLAVNQKPTYMDLADFVLSKFTDSERKIVDKEVELAKDAVLEILKSDVNT 179
Query: 199 SARHFNTIQ 207
+ N+I+
Sbjct: 180 AMNKINSIE 188
>gi|375087432|ref|ZP_09733804.1| peptidyl-tRNA hydrolase [Megamonas funiformis YIT 11815]
gi|374560760|gb|EHR32116.1| peptidyl-tRNA hydrolase [Megamonas funiformis YIT 11815]
Length = 202
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 107/177 (60%), Gaps = 2/177 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG++Y TRHN VGF ++DA AE I++ A +G +G +LL KP
Sbjct: 3 IIVGLGNPGNEYAKTRHN-VGFMLVDALAEHLNINLWKDKFNAQIAEGRIGTEKILLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGE+ GPL +YK+ ++V HDDM +P G +R+R G GGHNG+KS++ +
Sbjct: 62 QTYMNNSGEAVGPLMRWYKVTPEDIIVAHDDMDIPAGTIRIRKKGSSGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G+ F R+R+G+GRP +L F + +D A++ + ++ +++ +
Sbjct: 122 -GSENFPRVRLGVGRPLPGWSVVNHVLAPFPQEDKTAVDEAIKYLIPAVECIVNDSV 177
>gi|374605014|ref|ZP_09677959.1| peptidyl-tRNA hydrolase [Paenibacillus dendritiformis C454]
gi|374389399|gb|EHQ60776.1| peptidyl-tRNA hydrolase [Paenibacillus dendritiformis C454]
Length = 186
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG +Y TRHN +GF +D AE I + CKA G+G VG ++L K
Sbjct: 3 WI-VGLGNPGMQYASTRHN-IGFMAVDRLAERHQIQVRDSKCKALVGEGRVGTEKIVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ YYK ++V +DDM G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGEAVRAYMDYYKADPADLIVLYDDMDTELGKVRLRYQGSSGGHNGIKSLIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP + ++L F R++++ A+ + + ++ L+ +
Sbjct: 121 L-GTQTFNRVRMGISRPQPGREIVDYVLSPFAKAERDKLEEAIDKTCDAVEFALTHPFDQ 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|406987407|gb|EKE07767.1| hypothetical protein ACD_17C00525G0003 [uncultured bacterium]
Length = 202
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAP 73
++ WL VGLGN G Y TRHN VGFE +D A +S + K +G +G A
Sbjct: 1 MSHEWLVVGLGNLGSFYDETRHN-VGFEALDLLARKYNLSFQSKSDLKGLIAKGTLGGAS 59
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
VL+ KPQTYMNLSG + + YYK+ L+R+LV DD +P G LR+R N GGHNGLK
Sbjct: 60 VLMLKPQTYMNLSGHAVVAVMNYYKIELSRLLVLADDAAIPFGELRIRANSSSGGHNGLK 119
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV + +ARLRIG+G P D ++L +F+ ++ + L V+ +++ L
Sbjct: 120 SVEEAIHTDG-YARLRIGVGSPEAG-DLSDYVLGQFSKEEKKLLPEILGRVVQAVEIWLD 177
Query: 194 KGLTESARHFN 204
KGLT + + N
Sbjct: 178 KGLTSAMNYAN 188
>gi|425738705|ref|ZP_18856962.1| peptidyl-tRNA hydrolase [Staphylococcus massiliensis S46]
gi|425478976|gb|EKU46158.1| peptidyl-tRNA hydrolase [Staphylococcus massiliensis S46]
Length = 190
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G KY TRHN +GFE+ID E +++ + + +GD V+L +P
Sbjct: 4 IVGLGNIGKKYDLTRHN-IGFEVIDWLLERHNFNLDKQKFRGAYTIERMGDEKVMLIEPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ GPL YY + + +LV +DDM L G +RLR G GGHNG+KS++ +
Sbjct: 63 TLMNLSGEAVGPLMDYYGVEVEDLLVLYDDMDLEQGQIRLRQKGSAGGHNGMKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G EF R+RIGIGRP M ++LQKF++ + +D ++ ++ + E++
Sbjct: 122 GTNEFKRVRIGIGRPTNGMSVPDYVLQKFSSDEMKTMDKVIEHSARAVETFI-----ETS 176
Query: 201 RHFNTIQKY 209
R + + Y
Sbjct: 177 RFDHVMNNY 185
>gi|334119291|ref|ZP_08493377.1| Peptidyl-tRNA hydrolase [Microcoleus vaginatus FGP-2]
gi|333458079|gb|EGK86698.1| Peptidyl-tRNA hydrolase [Microcoleus vaginatus FGP-2]
Length = 220
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 15/198 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP--- 73
P L VGLGNP KY TRHN +GF +DA A+S I+++ + TFG+G + P
Sbjct: 16 PQLIVGLGNPEPKYDRTRHN-IGFNAVDALAKSWQIALSENRKFQGTFGEG---NRPRGQ 71
Query: 74 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
+ L KP TYMNLSG++ +YK+P VL+ +DDM LP G LR+R G GGHNG+
Sbjct: 72 KIRLLKPLTYMNLSGQAIRAATDWYKIPAESVLIVYDDMDLPIGKLRMRLAGSAGGHNGM 131
Query: 133 KSVMNNFRGNREFARLRIGIGRP-----PGQMDPKAFLLQKFNAIARERIDTALQEGVEV 187
KS +++ G +F RLRIGIG+P + D +F+L KF++ + ++ L+ VE
Sbjct: 132 KSTISHL-GTDKFPRLRIGIGKPQNDSAKNEKDTISFVLGKFSSEESQLVEKVLKLVVEA 190
Query: 188 LKLLLSKGLTESARHFNT 205
++L L +G+ ++ +N+
Sbjct: 191 VELSLHQGVEKAMSLYNS 208
>gi|150388005|ref|YP_001318054.1| peptidyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
gi|167011987|sp|A6TJM7.1|PTH_ALKMQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149947867|gb|ABR46395.1| Aminoacyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
Length = 185
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY GTRHN VGF++ID A GI++N + KA +G+ +G V+LAK
Sbjct: 2 YIIVGLGNPGKKYSGTRHN-VGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + +YK+ ++V +DD+ + G LR+R +G G HNG+KS +
Sbjct: 61 PQTFMNLSGESIREMMQFYKIDPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIYQ 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ + F R+RIG+GRP D ++L F + +L+ ++ ++ G+ +
Sbjct: 121 LQTD-AFPRIRIGVGRPEFG-DLSNYVLGSFTKDEIPLMKESLERATLTVESIVIDGIDK 178
Query: 199 SARHFN 204
+ +N
Sbjct: 179 AMNRYN 184
>gi|253681331|ref|ZP_04862129.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
gi|416348999|ref|ZP_11680559.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Stockholm]
gi|253562569|gb|EES92020.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
gi|338196606|gb|EGO88792.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Stockholm]
Length = 190
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 112/186 (60%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN VGF++ID AE I +N K +G G + V+L K
Sbjct: 2 FLIVGLGNPGKEYEHTRHN-VGFDVIDLLAEKHNIELNRKKFKGMYGDGNIAGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +YK+ ++V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 PLTYMNLSGESVREIMDFYKITNEDIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
N F+R+++G+G+P + + + +L KF +++ + + +++++ KG E
Sbjct: 121 LN-NDYFSRVKVGVGQPV-KTNLVSHVLGKFEKEDECKLNKTFEAACKAVQIIIEKGTAE 178
Query: 199 SARHFN 204
+ FN
Sbjct: 179 AMNKFN 184
>gi|350546384|ref|ZP_08915773.1| peptidyl-tRNA hydrolase [Mycoplasma iowae 695]
gi|349504038|gb|EGZ31592.1| peptidyl-tRNA hydrolase [Mycoplasma iowae 695]
Length = 189
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ T+HN VGF +ID+ + IS+ T F + + + V + K
Sbjct: 4 YLVVGLGNPGFQYENTKHN-VGFNVIDSLCKKINISLLTSKFNGVFSKANLYNKEVYICK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE +YK+P+ VLV +DD+ G ++L+ G GG NG+K+++ N
Sbjct: 63 PQTYMNLSGEFVSKFVNFYKIPIENVLVIYDDLDSEIGKIKLKTKGSSGGQNGIKNII-N 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G R++IGI RP + ++L KFN + +++ ++ + + + L T+
Sbjct: 122 LLGTESIKRIKIGISRPERNISISGYVLSKFNNEDKTKVEKSIDKASDAILFYLENDFTQ 181
Query: 199 SARHFN 204
+ FN
Sbjct: 182 AMNKFN 187
>gi|408829563|ref|ZP_11214453.1| peptidyl-tRNA hydrolase [Streptomyces somaliensis DSM 40738]
Length = 198
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 116/203 (57%), Gaps = 13/203 (6%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFG--QGF 68
T + PWL GLGNPG Y G RHN VGF ++D AE G S H KA +G
Sbjct: 1 MTTDASAPWLIAGLGNPGPGYAGNRHN-VGFMVVDLLAERIGGSFKR-HGKAQAQVLEGR 58
Query: 69 VGDAP------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 122
+G AP V+LAKP +YMNLSG L +YK+P ++ HD++ + GVLRL+
Sbjct: 59 IG-APGPAGRRVVLAKPMSYMNLSGGPLTALRDFYKVPTGNIVAVHDELDIDYGVLRLKL 117
Query: 123 NGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 182
GG GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 118 GGGDNGHNGLKSMTKAM--GPDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVD 175
Query: 183 EGVEVLKLLLSKGLTESARHFNT 205
+ ++ L+++GL + +N+
Sbjct: 176 RAADAVEALVTEGLERAQSAYNS 198
>gi|386840683|ref|YP_006245741.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100984|gb|AEY89868.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451793975|gb|AGF64024.1| peptidyl-tRNA hydrolase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 198
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFV 69
TA + PWL VGLGNPG +Y RHN VGF + D AE G +A +G +
Sbjct: 1 MTTAASDPWLIVGLGNPGPEYAMNRHN-VGFMVADLLAERIGGKFKRAGKAQAQVLEGRI 59
Query: 70 GDAP-----VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 124
G A V+LAKP +YMNLSG L +YK+PL V+ HD++ + LRL+ G
Sbjct: 60 GPAGPGSRRVVLAKPMSYMNLSGGPVNALRDFYKVPLGNVVAVHDELDIDYATLRLKLGG 119
Query: 125 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 184
G GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 120 GDNGHNGLKSMTKAM--GPDYHRVRCGIGRPPGRMQVADFVLKDFSSAERKELDWFVDRA 177
Query: 185 VEVLKLLLSKGLTESARHFNT 205
+ ++ L+++GL + +N+
Sbjct: 178 ADAVECLVTEGLERAQSAYNS 198
>gi|220908888|ref|YP_002484199.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
gi|219865499|gb|ACL45838.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
Length = 213
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 115/189 (60%), Gaps = 17/189 (8%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGD 71
+ RP L VGLGNPG+KY TRHN +GF ++DA A+ IS++ +A FG+G V
Sbjct: 7 SPAVRPTLIVGLGNPGEKYYRTRHN-IGFMVVDALADRWHISLSPHKRFQAEFGEGAVRG 65
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
A V L KP TYMN SG+S + +YK VLV +DDM LP G LRLR NG GGHNG
Sbjct: 66 ATVQLLKPTTYMNNSGQSVRAVLDWYKRSPQSVLVVYDDMDLPLGKLRLRLNGSAGGHNG 125
Query: 132 LKSVMNNFRGNREFARLRIGIGRPP---GQMDPKAFLLQKFN-----------AIARERI 177
++S++ + G ++F RLR+GIG P G+ D +L KF+ +A + I
Sbjct: 126 MRSLIAHL-GTQDFPRLRLGIGNPRQAGGEKDAIPHVLGKFSPAEGPIVAEVLELATKAI 184
Query: 178 DTALQEGVE 186
+T+L++GVE
Sbjct: 185 ETSLRDGVE 193
>gi|402838558|ref|ZP_10887063.1| aminoacyl-tRNA hydrolase [Eubacteriaceae bacterium OBRC8]
gi|402272772|gb|EJU21988.1| aminoacyl-tRNA hydrolase [Eubacteriaceae bacterium OBRC8]
Length = 187
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ T+HN VGF ID ++ I ++ + KA G+G ++L K
Sbjct: 2 YIIVGLGNPGLKYQNTKHN-VGFMAIDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + ++YK+ + V +DD+ + G LR+R G G HNG+K+++
Sbjct: 61 PQTFMNLSGESVQQIMSFYKVEHQNLFVLYDDIDIDVGKLRIRQKGSSGTHNGMKNII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R RIG+ +PP MD +++L F + + L E + KGL +
Sbjct: 120 LLGYDDFPRFRIGVSKPPQYMDLASYVLSNFTSEETNILSDVLDNCSEACLYAIEKGLDK 179
Query: 199 SARHFN 204
S +N
Sbjct: 180 SMNKYN 185
>gi|323342262|ref|ZP_08082494.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463374|gb|EFY08568.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 186
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 9/174 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ TRHN GF +ID A G+S++T KA + FVG V+L KP
Sbjct: 7 VIVGLGNPGKQYENTRHN-AGFLVIDEVASKLGVSISTNKFKALIAETFVGTEKVVLVKP 65
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES G + YY + L +LV DDM + G LRLR G GG G+KS++++
Sbjct: 66 QTFMNLSGESVGEVMRYYDVDLEDLLVISDDMDITVGSLRLREKGSSGGQKGVKSIIDHL 125
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+ EF RL++GIG+ Q+ ++L K + +TA+ G + + +S
Sbjct: 126 -GSNEFLRLKVGIGKST-QIKTVDWVLGKIDE------ETAISLGAQCVSDFIS 171
>gi|359462044|ref|ZP_09250607.1| peptidyl-tRNA hydrolase [Acaryochloris sp. CCMEE 5410]
Length = 206
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 6/191 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAP-VL 75
P L VGLGNPG KY TRHN +GF ID A+ IS+ + + +G+G G + V
Sbjct: 8 PELIVGLGNPGSKYDRTRHN-IGFAFIDRLAQHWQISLTSERRFQGEYGEGLGGQSRRVR 66
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG+S + ++KL VLV +D+M LP G LRLR G GGHNG++S+
Sbjct: 67 LLKPHTYMNNSGQSIRAVIDWFKLEPTSVLVIYDEMALPVGKLRLRLKGSAGGHNGMRSI 126
Query: 136 MNNFRGNREFARLRIGIGRPPGQ--MDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
+++ G E RLRIGIG PP + D +F+L +F + + L GV+ +++ L
Sbjct: 127 ISHL-GTPEVPRLRIGIGSPPPERGKDTISFVLGRFAPPENQLLPAVLDLGVDAVEMALK 185
Query: 194 KGLTESARHFN 204
KG+ +S FN
Sbjct: 186 KGIEQSMTLFN 196
>gi|389576690|ref|ZP_10166718.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
gi|389312175|gb|EIM57108.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
Length = 189
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG KY T+HN +GF+ I + I KA +G+G +G V+L K
Sbjct: 2 FLIAGLGNPGRKYDRTKHN-MGFDTITELVDRWNIPQGGTDMKAMYGKGLIGGQKVMLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P TYMNLSGES YYK+ P + +LV +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PLTYMNLSGESIAAYVNYYKVDPESELLVIYDDISLDPGQLRIRKKGSAGGHNGMKNIIQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G +FAR+R+GIG P D ++L F+ RE +D + + +++++ +
Sbjct: 121 HL-GTDKFARIRVGIGDKPAGWDLADYVLAPFSKADRELVDAGIGRAADAAEMIVAGEID 179
Query: 198 ESARHFN 204
+ FN
Sbjct: 180 RAMNTFN 186
>gi|336066935|ref|YP_004561793.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334296881|dbj|BAK32752.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 182
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 9/174 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ TRHN GF +ID A G+S++T KA + FVG V+L KP
Sbjct: 3 VIVGLGNPGKQYENTRHN-AGFLVIDEVASKLGVSISTNKFKALIAETFVGTEKVVLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES G + YY + L +LV DDM + G LRLR G GG G+KS++++
Sbjct: 62 QTFMNLSGESVGEVMRYYDVDLEDLLVISDDMDITVGSLRLREKGSSGGQKGVKSIIDHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+ EF RL++GIG+ Q+ ++L K + +TA+ G + + +S
Sbjct: 122 -GSNEFLRLKVGIGKST-QIKTVDWVLGKIDE------ETAISLGAQCVSDFIS 167
>gi|325288388|ref|YP_004264569.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
gi|324963789|gb|ADY54568.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
Length = 185
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 22 VGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 81
+GLGNPG KY TRHN VGF ++D A ++ + + K F + + ++L KP T
Sbjct: 5 IGLGNPGIKYADTRHN-VGFMLLDRIAGNEDVQYSK-GFKGKFAEIRHQNRKIILLKPYT 62
Query: 82 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRG 141
+MNLSG+S L YYK+PL +LV HDDM + G LR R G GGHNG+KS++ G
Sbjct: 63 FMNLSGQSVAELINYYKVPLEDMLVIHDDMDIALGRLRFREKGSAGGHNGIKSIIQEL-G 121
Query: 142 NREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 201
+EF RL+IG+GRP + D + +L F+ +RE + L++ + + L L E+ +
Sbjct: 122 TQEFWRLKIGVGRPQKERDVVSHVLSGFDRESREVLSETLEKARKAVFLWLEGKEAEAMQ 181
Query: 202 HFNT 205
++N+
Sbjct: 182 NYNS 185
>gi|238917834|ref|YP_002931351.1| hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
gi|259535178|sp|C4Z4L5.1|PTH_EUBE2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238873194|gb|ACR72904.1| Hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
Length = 186
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y GTRHN GF +ID A+ IS++T K G+G + V+L K
Sbjct: 2 YIIAGLGNPGKEYMGTRHN-AGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SGE + YYK ++ LV DD+ L G LRLR G GGHNG+KS++ +
Sbjct: 61 PMTYMNNSGECIREVMDYYKCDIDDFLVIFDDISLDVGKLRLRAKGSAGGHNGIKSIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F R++ G+G P D ++L KF A + A ++ E ++ +L+ G+
Sbjct: 121 L-GSDKFKRIKFGVGDKPKNWDLADWVLGKFPAEEYATLREANKKACEAVECILTDGIES 179
Query: 199 SARHFN 204
+N
Sbjct: 180 GMNKYN 185
>gi|440704383|ref|ZP_20885236.1| aminoacyl-tRNA hydrolase [Streptomyces turgidiscabies Car8]
gi|440273959|gb|ELP62625.1| aminoacyl-tRNA hydrolase [Streptomyces turgidiscabies Car8]
Length = 198
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 9/201 (4%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFV 69
T PWL VGLGNPG +Y RHN VGF + D AE G +A +G V
Sbjct: 1 MTTDAGGPWLIVGLGNPGPEYAMNRHN-VGFMVADLLAERIGGKFKRAGKAQAQVIEGRV 59
Query: 70 G-----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 124
G + V+LAKP +YMNLSG L +YK+ L+RV+ HD++ + GVLRL+ G
Sbjct: 60 GPPGPANRRVILAKPMSYMNLSGGPVNALREFYKVSLDRVVAVHDELDIDYGVLRLKLGG 119
Query: 125 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 184
G GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 120 GDNGHNGLKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRA 177
Query: 185 VEVLKLLLSKGLTESARHFNT 205
+ ++ L+++GL + +N+
Sbjct: 178 TDAVESLVTEGLERAQGAYNS 198
>gi|86608210|ref|YP_476972.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119391025|sp|Q2JNF7.1|PTH_SYNJB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86556752|gb|ABD01709.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 224
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 109/189 (57%), Gaps = 3/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG +Y TRHN GF ++D A+ GI + + ++G+GF L K
Sbjct: 16 LVVGLGNPGPQYANTRHN-CGFMVVDRLAQRWGIPLVLEKRFQGSYGEGFALGGKRRLLK 74
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+TYMN SG+S + +YKL L VLV +DDM LP G LRLR +G GGHNG+KS++ +
Sbjct: 75 PETYMNRSGQSVRAVLDWYKLDLASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSIIQH 134
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ F RLR+G+G+P G D +L F +E ++ L VE ++ +GL
Sbjct: 135 L-GSEAFPRLRLGVGKPKGSQDVVGHVLGGFAPAEQEVLERVLDVAVEAVECCWQEGLRT 193
Query: 199 SARHFNTIQ 207
+ FN +
Sbjct: 194 AMNRFNPLD 202
>gi|392423512|ref|YP_006464506.1| peptidyl-tRNA hydrolase [Desulfosporosinus acidiphilus SJ4]
gi|391353475|gb|AFM39174.1| peptidyl-tRNA hydrolase [Desulfosporosinus acidiphilus SJ4]
Length = 185
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 100/174 (57%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN +GF ID AE+ G+ T + + +G V +LL KP
Sbjct: 3 VIVGLGNPGPQYAETRHN-IGFLFIDGLAEALGLQFRT-KFQGLWTEGSVQGERLLLLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSG S L +YK+ +L+ HDDM LP G LRLR +G GGHNG+KS+M
Sbjct: 61 HTFMNLSGRSVRELVNFYKIAPEDILIVHDDMDLPLGKLRLRDHGSAGGHNGIKSIMAEL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G F RL++G+GRPP + DP ++L F I+ L+ + L L
Sbjct: 121 -GTETFWRLKLGVGRPPKEWDPARYVLSPFGETELPAIEDLLERAEKAAGLWLK 173
>gi|428781502|ref|YP_007173288.1| peptidyl-tRNA hydrolase [Dactylococcopsis salina PCC 8305]
gi|428695781|gb|AFZ51931.1| peptidyl-tRNA hydrolase [Dactylococcopsis salina PCC 8305]
Length = 190
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGD-APVLLA 77
L VGLGNPGDKY TRHN +GFE++DA A+ G+ K + +GFV + + L
Sbjct: 6 LIVGLGNPGDKYDKTRHN-IGFEVVDAIAKDWGLEWRENNRFKGNYSEGFVPNLGKIRLL 64
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP TYMN SG++ + +YK+ VL+ +DD+ LP G LRLR +G GGHNG+KS++
Sbjct: 65 KPTTYMNHSGQAVRSVCDWYKIAPESVLIIYDDLDLPVGKLRLRLSGSAGGHNGIKSIIA 124
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G ++F RLRIGI + D + +L KF+ + I AL +VL+ +LS G
Sbjct: 125 HL-GTQQFPRLRIGIKKTDTVKDTISHVLGKFSPDEQPYIKEALAIAPKVLETVLSDGFE 183
Query: 198 ESARHFN 204
++ +N
Sbjct: 184 KAMNLYN 190
>gi|296169882|ref|ZP_06851494.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895438|gb|EFG75140.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 191
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 115/184 (62%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPGD Y TRHN +GF + D A G S VH + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHN-LGFMVADLLAGRLG-SKFKVHKRSGAEVVSGRLAGH 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PVL+AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL
Sbjct: 59 PVLVAKPRCYMNESGRQVGPLAKFYSVPPADIVVVHDDLDLDFGRIRLKIGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + G +EF R+RIGIGRPPG+ DP AF+L+ F+A R + T ++ + +LL+
Sbjct: 119 RSVASAL-GTKEFQRVRIGIGRPPGRKDPAAFVLENFSAAERGDVPTICEQAADATELLV 177
Query: 193 SKGL 196
GL
Sbjct: 178 ELGL 181
>gi|337286885|ref|YP_004626358.1| peptidyl-tRNA hydrolase [Thermodesulfatator indicus DSM 15286]
gi|335359713|gb|AEH45394.1| peptidyl-tRNA hydrolase [Thermodesulfatator indicus DSM 15286]
Length = 189
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 6/186 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL+VGLGNPG +Y+ TRHN GF ++D A +G+ + ++ DA L K
Sbjct: 6 WLWVGLGNPGPRYRFTRHN-FGFLVLDELASLKGLKFSQGAYQSLVSA--YKDA--FLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGE+ P + K+ R+LV HDD+ LP G L+ GG GGH G+KSV++
Sbjct: 61 PQTFMNLSGEAVAPWSRKLKISSERILVIHDDLDLPLGRLKFVPKGGAGGHRGVKSVIDA 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF RL++GIGRPP + + ++L F+ + L+ VE L LL L +
Sbjct: 121 L-GTKEFPRLKLGIGRPPQGVTVREYVLSPFSESEIPLVKKVLERAVEALDYLLEHDLPK 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMSTFN 185
>gi|365840561|ref|ZP_09381746.1| aminoacyl-tRNA hydrolase [Anaeroglobus geminatus F0357]
gi|364561178|gb|EHM39091.1| aminoacyl-tRNA hydrolase [Anaeroglobus geminatus F0357]
Length = 188
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 3/191 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+G++HN GF ++D A +S+ +A V LL KP
Sbjct: 1 MIVGLGNPGREYEGSKHN-AGFAVVDELARKWDVSLWKSQMEALVASVAVDGETALLVKP 59
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GPL +YK+ V V +DDM LP G LR+R NG GGHNG++S+ N
Sbjct: 60 QTYMNDSGRAVGPLMRWYKIAEEDVYVIYDDMDLPVGKLRIRENGSDGGHNGIRSLFAN- 118
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G R F R R+GIGRP G+ D +L F+ + + E ++ ++ G+++
Sbjct: 119 -GCRNFVRFRLGIGRPLGRQDVINHVLTPFSEAYCAQFADGVAYAAEAVEGVMKLGVSKG 177
Query: 200 ARHFNTIQKYK 210
+N +K K
Sbjct: 178 MNRYNPKRKSK 188
>gi|205371996|ref|ZP_03224814.1| peptidyl-tRNA hydrolase [Bacillus coahuilensis m4-4]
Length = 185
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG K+ GTRHN +GFE+ID A+ ++++ K + +L KP
Sbjct: 3 LIVGLGNPGAKFDGTRHN-IGFEVIDELAKRFNVALDQSKFKGVYSIVRHEGEKFILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YY + + ++V +DD+ LP G LRLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGESIRPLMDYYDIDIEDLVVIYDDLDLPVGKLRLRQKGSAGGHNGMKSTIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+++F R+R+G+ RPP M ++L KF A + ++ ++ + + L +
Sbjct: 122 -GSQQFNRIRLGVDRPPSGMTVPNYVLGKFTASEQPLVEEVVKASADACEAWLKEPFLSV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNKFN 185
>gi|384208211|ref|YP_005593931.1| peptidyl-tRNA hydrolase [Brachyspira intermedia PWS/A]
gi|343385861|gb|AEM21351.1| putative peptidyl-tRNA hydrolase [Brachyspira intermedia PWS/A]
Length = 298
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 108/174 (62%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPGD+YK RHN VGF +ID AE+ I+ + K+ + + D +L KP
Sbjct: 5 LIIGLGNPGDEYKNNRHN-VGFILIDKIAENFNINFDNNKKKSLYARAKEKDIEYILLKP 63
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES ++ ++ + ++V +DDM +P G +++ G GGHNG+KS++++
Sbjct: 64 QTFMNLSGESAIFISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHL 123
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL-QEGVEVLKLLL 192
+ + +F R+RIGIGRP ++L F+ RE +DT + + ++ +K+ L
Sbjct: 124 QSD-DFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREDLDTVIANDIIDAVKISL 176
>gi|354559302|ref|ZP_08978552.1| Peptidyl-tRNA hydrolase [Desulfitobacterium metallireducens DSM
15288]
gi|353542891|gb|EHC12351.1| Peptidyl-tRNA hydrolase [Desulfitobacterium metallireducens DSM
15288]
Length = 185
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 105/192 (54%), Gaps = 9/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN VGF ++D +AE + G+ V KP
Sbjct: 3 LIVGLGNPGGQYAETRHN-VGFLLLDTWAEELKLDFRPKFQGLIAEMQLTGEK-VFFLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSG S +A +YK+ +LV HDDM LP G +RLR +G GGHNG+KS +
Sbjct: 61 LTFMNLSGRSIREIAQFYKIASKDILVAHDDMDLPLGRIRLRQSGSAGGHNGIKSTIAEV 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF RL+IG+GRPP DP ++L F ++ L+ G EVL+L + ES
Sbjct: 121 -GTEEFWRLKIGVGRPPAGWDPANYVLGSFGKEELSSLEDVLERGQEVLRLWIQ---GES 176
Query: 200 ARHFNTIQKYKH 211
+ N KY H
Sbjct: 177 NKAMN---KYNH 185
>gi|451816996|ref|YP_007453197.1| peptidyl-tRNA hydrolase Pth [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451782975|gb|AGF53943.1| peptidyl-tRNA hydrolase Pth [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 191
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GF+++D A+ I +N K +G+GF+ V+L K
Sbjct: 2 FLIVGLGNPGKEYEDTRHN-IGFKVVDNIAKEYNIQINRQKFKGIYGEGFINGQKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +Y + + +L+ +DD+ L G LR+R G GGHNG+KS++ +
Sbjct: 61 PTTYMNLSGESVREVVNFYNIENDEILIIYDDISLDVGKLRIREKGSAGGHNGIKSIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ F+R++IG+G+P D +L KF+ +D +++ ++ +
Sbjct: 121 L-GSEVFSRIKIGVGQPNS--DLVKHVLGKFSKEEMVTLDESIEAATNATAEIIKNDVKT 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMNQFN 183
>gi|15612631|ref|NP_240934.1| peptidyl-tRNA hydrolase [Bacillus halodurans C-125]
gi|14195082|sp|Q9KGJ3.1|PTH_BACHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|10172680|dbj|BAB03787.1| stage V sporulation protein C (peptidyl-tRNA hydrolase) [Bacillus
halodurans C-125]
Length = 185
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 4/186 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY GTRHN VGF+++DA A I + +G+G + + L KP
Sbjct: 3 LIVGLGNPGAKYDGTRHN-VGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SGES P YY + + +LV +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 QTFMNRSGESVRPFLEYYNMEVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHL 121
Query: 140 RGNREFARLRIGIGRP-PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R+R+G+ RP PG+ + +L ++ ++ I A+ E + K E
Sbjct: 122 -GTSDFKRIRVGVDRPAPGETVVQ-HVLGRYRPEEKDAISEAIDLSAEAAEAFTKKPFLE 179
Query: 199 SARHFN 204
FN
Sbjct: 180 VMNTFN 185
>gi|428317242|ref|YP_007115124.1| peptidyl-tRNA hydrolase [Oscillatoria nigro-viridis PCC 7112]
gi|428240922|gb|AFZ06708.1| peptidyl-tRNA hydrolase [Oscillatoria nigro-viridis PCC 7112]
Length = 220
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 119/198 (60%), Gaps = 15/198 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP--- 73
P L VGLGNP KY TRHN +GF +DA A+S IS++ + FG+G + P
Sbjct: 16 PQLIVGLGNPEPKYDRTRHN-IGFNAVDALAKSWQISLSENRKFQGIFGEG---NRPRGQ 71
Query: 74 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
+ L KP TYMNLSG++ +YK+P VL+ +DDM LP G LR+R G GGHNG+
Sbjct: 72 KIRLLKPLTYMNLSGQAIRAATDWYKIPAESVLIVYDDMDLPIGKLRMRLAGSAGGHNGM 131
Query: 133 KSVMNNFRGNREFARLRIGIGRP-----PGQMDPKAFLLQKFNAIARERIDTALQEGVEV 187
KS +++ G +F RLRIGIG+P + D +F+L KF++ + ++ L+ VE
Sbjct: 132 KSTISHL-GTDKFPRLRIGIGKPQNDAAKNEKDTISFVLGKFSSEESQLVEKVLKLVVEA 190
Query: 188 LKLLLSKGLTESARHFNT 205
++L L +G+ ++ +N+
Sbjct: 191 VELSLHQGVEKAMSLYNS 208
>gi|312897815|ref|ZP_07757231.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
gi|310621199|gb|EFQ04743.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
Length = 187
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y+G++HN GF +ID A G++ A V VLL KP
Sbjct: 1 MIAGLGNPGREYEGSKHN-AGFTVIDELARRWGVNTWQTRMDAEVAIANVDGEQVLLVKP 59
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG+S GPL +YK+ V V +DDM LP G LR+R NG GGHNG+KS+ N
Sbjct: 60 QTYMNDSGKSVGPLMRWYKIDEKDVYVVYDDMDLPIGKLRIRENGSDGGHNGIKSLFAN- 118
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G R+F R R+GIGRP G MD +L F R+ E ++ L G+++
Sbjct: 119 -GCRDFVRFRLGIGRPLGHMDVIHHVLTPFPEEYRQTFADGAAYAAEAVEGCLKLGVSKG 177
Query: 200 ARHFN 204
+N
Sbjct: 178 MNRYN 182
>gi|402570690|ref|YP_006620033.1| peptidyl-tRNA hydrolase [Desulfosporosinus meridiei DSM 13257]
gi|402251887|gb|AFQ42162.1| peptidyl-tRNA hydrolase [Desulfosporosinus meridiei DSM 13257]
Length = 185
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 99/163 (60%), Gaps = 3/163 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG +Y+ TRHN +GF +ID AE + + + +G + + L KP
Sbjct: 3 VIMGLGNPGVQYEETRHN-IGFLLIDLIAEVHNLQFRS-KFQGLVAEGQIEGERLFLLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S L +YK+PL+ +L+ DDM LP G LRLR G GGHNG+KS+
Sbjct: 61 QTFMNLSGRSVAELIKFYKIPLDDLLIVQDDMDLPLGKLRLRDQGSAGGHNGIKSIQGEL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 182
G+ + RL++G+GRPP + DP ++L F+ + +D L+
Sbjct: 121 -GSEKLWRLKLGVGRPPKEWDPARYVLAPFSDDESQMLDDVLE 162
>gi|15807362|ref|NP_296093.1| peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
gi|14195089|sp|Q9RRW3.1|PTH_DEIRA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|6460187|gb|AAF11918.1|AE002068_1 peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
Length = 215
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 6/188 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---VLL 76
L VGLGNPG+KY TRHN VG+ ++D A G S +A + +G AP VLL
Sbjct: 3 LIVGLGNPGEKYAQTRHN-VGWLVVDELARRAGGSWRK-DGEAEVCEVRLGTAPGEKVLL 60
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KPQT+MN SG++ PL ++YKL ++LV DD+ P G+LR R G HGG NG++ ++
Sbjct: 61 VKPQTFMNTSGKAVWPLMSFYKLEGEQLLVVQDDLDSPFGLLRFRLGGRHGGQNGVRDII 120
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G F RL+IGI RPP DP ++L K+ RE + ++ GV +L +GL
Sbjct: 121 ARL-GYDRFPRLKIGISRPPAGRDPADWVLSKWRDEERETLAELVRLGVGAAELWAVQGL 179
Query: 197 TESARHFN 204
E+ + +N
Sbjct: 180 AEAQQMYN 187
>gi|363893678|ref|ZP_09320773.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium ACC19a]
gi|361963480|gb|EHL16552.1| peptidyl-tRNA hydrolase [Eubacteriaceae bacterium ACC19a]
Length = 187
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 8/189 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ T+HN VGF ID ++ I ++ + KA G+G ++L K
Sbjct: 2 YIIVGLGNPGLKYQNTKHN-VGFMAIDILSKKLNIKVDKIKFKALIGEGQYKGEKIILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES + ++YK + V +DD+ + G LR+R G G HNG+K+++
Sbjct: 61 PQTFMNLSGESVQQIMSFYKAEHQNLFVLYDDIDIDIGKLRIRQKGSSGTHNGMKNII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERID---TALQEGVEVLKLLLSKG 195
G +F R RIG+ RPP MD +++L F +E ID L E + KG
Sbjct: 120 LLGYDDFPRFRIGVSRPPQYMDLASYVLSNF---TKEEIDILLNVLDNCSEACLYAIEKG 176
Query: 196 LTESARHFN 204
L +S +N
Sbjct: 177 LDKSMNKYN 185
>gi|238922869|ref|YP_002936382.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|259535182|sp|C4ZBV8.1|PTH_EUBR3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238874541|gb|ACR74248.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|291523767|emb|CBK89354.1| peptidyl-tRNA hydrolase [Eubacterium rectale DSM 17629]
gi|291528768|emb|CBK94354.1| peptidyl-tRNA hydrolase [Eubacterium rectale M104/1]
Length = 186
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 112/183 (61%), Gaps = 4/183 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNP KY+ TRHN +GF++IDA A+ IS+ KA G G + VLL K
Sbjct: 2 YVIVGLGNPDKKYEHTRHN-IGFDVIDALADKYNISVTDKKHKALCGSGVIEGMKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES + +YKL P ++V DD+ L G +R+R G GGHNG+KS++
Sbjct: 61 PQTYMNLSGESVAEVMNFYKLDPDEEMIVIFDDISLEPGRIRIRKKGSAGGHNGIKSIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G + F+R+++G+G P D +L +F++ R +++ A+ ++ +L+ +G T
Sbjct: 121 -MTGTQGFSRIKVGVGEKPQGWDLADHVLGRFSSEDRAKVEEAIGHAMDA-AVLMMQGET 178
Query: 198 ESA 200
+ A
Sbjct: 179 DKA 181
>gi|374578788|ref|ZP_09651882.1| peptidyl-tRNA hydrolase [Desulfosporosinus youngiae DSM 17734]
gi|374414870|gb|EHQ87305.1| peptidyl-tRNA hydrolase [Desulfosporosinus youngiae DSM 17734]
Length = 185
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 104/181 (57%), Gaps = 4/181 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN VGF ++D AE + + + G+V +LL KP
Sbjct: 3 VIVGLGNPGSQYSETRHN-VGFLLVDLLAEVHKLQFRS-KFQGLLADGYVEGERLLLLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S L +YK+ +L+ DDM LP G LRLR GG GGHNG+KS+
Sbjct: 61 QTFMNLSGRSVIELIHFYKVAQENILIVQDDMDLPLGKLRLRDQGGSGGHNGIKSIQAEL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ + RL++G+GRPP D ++L F E +D AL+ + + L + KG TE
Sbjct: 121 -GSEKIWRLKMGVGRPPKDWDSARYVLAPFAEGELELLDGALERAEKAVYLWI-KGETER 178
Query: 200 A 200
A
Sbjct: 179 A 179
>gi|373107098|ref|ZP_09521398.1| peptidyl-tRNA hydrolase [Stomatobaculum longum]
gi|371652037|gb|EHO17463.1| peptidyl-tRNA hydrolase [Stomatobaculum longum]
Length = 190
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+ TRHN GFE+ID A +S KA G+ +LL K
Sbjct: 2 YIIAGLGNPGREYEKTRHN-AGFEVIDRLAAKLEVSSWEKKHKALAGKAMYAGEKLLLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES AA+Y++ + +LV DD+ L G LR+R +G GGHNGLKS+++N
Sbjct: 61 PQTYMNLSGESLLSAAAFYRVTPDHILVISDDIDLAEGRLRIRKSGSAGGHNGLKSIISN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F R+R+G+G P D ++L + E+++ A ++ E + +L +G+
Sbjct: 121 L-GSGDFIRVRVGVGSKPAGFDLADYVLGRAKGEDAEKMEQAYRDAAEAVLSILEEGVDR 179
Query: 199 SARHFN 204
+ N
Sbjct: 180 TMNKVN 185
>gi|227873323|ref|ZP_03991585.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
gi|227840838|gb|EEJ51206.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
Length = 197
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQG-ISMNTVHCKATFGQGFVGDAPVLLA 77
WL GLGNP KY GTRHN GF +ID + G +S+ + + + + +G VLL
Sbjct: 2 WLIAGLGNPEKKYVGTRHN-AGFAVIDVLCKELGNLSLESTKFRGAYTKTRIGSEEVLLL 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP TYMNLSGES PLA Y+K+P +LV D++ G +R+R G GGHNGLK+++
Sbjct: 61 KPLTYMNLSGESIVPLAQYFKIPKEHILVLSDEISFAPGDIRIRKKGSAGGHNGLKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ + EF R+R+G+G + D +L F+ + ++ A + + ++ KG+
Sbjct: 121 HLH-SEEFPRIRLGVGAKGEKEDLAHHVLSPFSKAEQAEMEDAYERAAKACIAIVEKGID 179
Query: 198 ESARHFNTIQKYKH 211
++ FN +K K
Sbjct: 180 QAMNEFNQKKKGKE 193
>gi|254384996|ref|ZP_05000331.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
gi|194343876|gb|EDX24842.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
Length = 196
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 8/193 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG-----DA 72
PWL VGLGNPG +Y G RHN +GF + D A+ +A +G +G +
Sbjct: 7 PWLIVGLGNPGAEYAGNRHN-IGFMVADLLADRMRGKFKAHKARAQVVEGRMGPPGPANR 65
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP ++MNLSG L +YK+PL R++ HD++ + LRL+ GG GHNGL
Sbjct: 66 RVVLAKPMSFMNLSGGPVTALRDFYKVPLERIVAIHDELDIDYPTLRLKLGGGDNGHNGL 125
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
KS+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L+
Sbjct: 126 KSMTKSM--GPDYHRVRCGIGRPPGRMQVADFVLKDFSSTERKELDWFVDRAADAVECLI 183
Query: 193 SKGLTESARHFNT 205
++GL + +N+
Sbjct: 184 AEGLERAQSSYNS 196
>gi|167039250|ref|YP_001662235.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300913890|ref|ZP_07131207.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307725425|ref|YP_003905176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
gi|238687630|sp|B0K466.1|PTH_THEPX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166853490|gb|ABY91899.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300890575|gb|EFK85720.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307582486|gb|ADN55885.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
Length = 184
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+GTRHN VGF +ID A+ G+++ + K+ G+G ++L K
Sbjct: 2 YVIAGLGNPGREYEGTRHN-VGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+ S++
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIPLENVIVIYDDKDLDLGKIRIRKKGSSGGHNGMNSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ EF R+RIGIG+P Q D + +L KF ++ ID A+ + + + ++ G+
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMSKFN 183
>gi|41407076|ref|NP_959912.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254774033|ref|ZP_05215549.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp. avium ATCC
25291]
gi|417747057|ref|ZP_12395535.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440776568|ref|ZP_20955408.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S5]
gi|68052977|sp|Q741V9.1|PTH_MYCPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41395427|gb|AAS03295.1| Pth [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461343|gb|EGO40214.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436723246|gb|ELP47092.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 191
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPGD Y TRHN VGF + D A G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHN-VGFMVADLLAARMG-SKFKAHKRSGAEIVSGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V++AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL
Sbjct: 59 SVVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV N G+++F R+RIGIGRPPG+ DP AF+L+ F + R + T ++ + +LL+
Sbjct: 119 RSVANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLI 177
Query: 193 SKGL 196
GL
Sbjct: 178 ELGL 181
>gi|407984843|ref|ZP_11165451.1| peptidyl-tRNA hydrolase [Mycobacterium hassiacum DSM 44199]
gi|407373678|gb|EKF22686.1| peptidyl-tRNA hydrolase [Mycobacterium hassiacum DSM 44199]
Length = 186
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 111/191 (58%), Gaps = 8/191 (4%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLAK 78
VGLGNPG +Y TRHN +GF + D A+ G VH K A G +G V++AK
Sbjct: 1 MVGLGNPGPQYATTRHN-LGFMVADILADRIGAGFK-VHKKSGAEVVTGRLGGRSVVVAK 58
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+ YMN SG GPLA +Y +P V++ HD++ + G +RL+ GG GHNGL+SV +
Sbjct: 59 PRCYMNESGRQVGPLAKFYSVPPADVIIIHDELDIDFGRIRLKFGGGVAGHNGLRSVSSA 118
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R+R+GIGRPPG+MD F+L F A + + T ++ + +LL+ GL
Sbjct: 119 L-GTNDFHRVRVGIGRPPGRMDGARFVLSPFTAAEWKEVPTICEQAADATELLVQHGLVA 177
Query: 199 SARHFNTIQKY 209
+ NT+ +
Sbjct: 178 AQ---NTVHAW 185
>gi|429205501|ref|ZP_19196773.1| peptidyl-tRNA hydrolase [Lactobacillus saerimneri 30a]
gi|428146112|gb|EKW98356.1| peptidyl-tRNA hydrolase [Lactobacillus saerimneri 30a]
Length = 185
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 3/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G KY+ TRHN VGF ++D A++ G + A + F+ VLL KP
Sbjct: 3 MVVGLGNIGKKYEATRHN-VGFMVVDELAQAYGATFAKEKMNALVTEIFIAGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL +YK+P+ +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 62 TTYMNESGRAVRPLMDFYKIPVEDIIICHDDMDLDIGKLRLRQKGSAGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
G + F RLR+GIG P +M ++L +F+ + I + +GV ++
Sbjct: 122 -GTQSFKRLRVGIGHPD-KMTVVDWVLSRFSQAQKAVITDTIADGVAAIE 169
>gi|363897751|ref|ZP_09324289.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB7]
gi|361958216|gb|EHL11518.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB7]
Length = 189
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 108/189 (57%), Gaps = 7/189 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAE---SQGISMNTVHCKATFGQGFVGDAPVL 75
WL GLGNP KY GTRHN GF +IDA E +G+ H F + +G V+
Sbjct: 2 WLIAGLGNPEKKYNGTRHN-AGFAVIDALLEMLGGKGLESTKFH--GAFTKLRIGTEEVV 58
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ KP TYMNLSG+S P+ +YK+P +VLV D++ L G +R+R G GGHNGLKS+
Sbjct: 59 ILKPLTYMNLSGDSIAPMVNFYKIPAEQVLVISDEISLSPGSIRIRKKGSAGGHNGLKSI 118
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ G +F R+R+G+G + D A +L +F +R++ A E + ++++G
Sbjct: 119 IARL-GTEDFPRIRLGVGEKKEREDLAAHVLGRFEKEDEKRMEEAYTEAAKACICIVTEG 177
Query: 196 LTESARHFN 204
+ ++ +N
Sbjct: 178 IEKAMNLYN 186
>gi|118465371|ref|YP_880401.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
gi|166227336|sp|A0QBW3.1|PTH_MYCA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118166658|gb|ABK67555.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
Length = 191
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPGD Y TRHN VGF + D A G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHN-VGFMVADLLAARMG-SKFKAHKRSGAEIVSGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V++AKP+ YMN SG GPLA +Y +P ++V HDD+ L G +RL+ GG GGHNGL
Sbjct: 59 SVVVAKPRCYMNESGRQVGPLAKFYSVPPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV N G+++F R+RIGIGRPPG+ DP AF+L+ F + R + T ++ + +LL+
Sbjct: 119 RSVSNAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLI 177
Query: 193 SKGL 196
GL
Sbjct: 178 ELGL 181
>gi|408678666|ref|YP_006878493.1| Peptidyl-tRNA hydrolase [Streptomyces venezuelae ATCC 10712]
gi|328882995|emb|CCA56234.1| Peptidyl-tRNA hydrolase [Streptomyces venezuelae ATCC 10712]
Length = 198
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAES-QGISMNTVHCKATFGQGFVG-----D 71
PWL VGLGNPG +Y RHN +GF ++D AE +G +A +G +G
Sbjct: 8 PWLIVGLGNPGPEYAANRHN-IGFMVVDLLAERMRGSFKRAGKAQAQVVEGRMGPPGPAS 66
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP +YMNLSG L +YK+P V+ HD++ + GVLRL+ GG GHNG
Sbjct: 67 RRVILAKPMSYMNLSGGPVTALRDFYKVPTANVVAVHDELDIDYGVLRLKIGGGDNGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ E+ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L
Sbjct: 127 LKSMTKAM--GAEYHRVRCGIGRPPGRMQVADFVLKDFSSTERKDLDWFVDRAADSVECL 184
Query: 192 LSKGLTESARHFNT 205
+++GL + +N+
Sbjct: 185 VAEGLERAQSAYNS 198
>gi|445063566|ref|ZP_21375748.1| peptidyl-tRNA hydrolase [Brachyspira hampsonii 30599]
gi|444505055|gb|ELV05635.1| peptidyl-tRNA hydrolase [Brachyspira hampsonii 30599]
Length = 298
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 108/174 (62%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPGD+YK RHN VGF +ID AE+ I+ + K+ + + + +L KP
Sbjct: 5 LIIGLGNPGDEYKNNRHN-VGFILIDKIAENFNINFDNNKKKSLYARSKEKNIEYILLKP 63
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES ++ ++ + ++V +DDM +P G +++ G GGHNG+KS++++
Sbjct: 64 QTFMNLSGESAIFISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHL 123
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG-VEVLKLLL 192
+ + +F R+RIGIGRP ++L F+ RE +DT + + ++ +K+ L
Sbjct: 124 QSD-DFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREELDTVIADDIIDAVKIAL 176
>gi|441214878|ref|ZP_20976323.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis MKD8]
gi|440624998|gb|ELQ86851.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis MKD8]
Length = 191
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 123/197 (62%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN +GF + D A G S VH K A G +
Sbjct: 1 MAEPLLVVGLGNPGPTYAKTRHN-LGFMVADVLAGRIG-SAFKVHKKSGAEVVTGRLAGT 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ YMN SG GPLA +Y +P +++V HD++ + G +RL+ GG GGHNGL
Sbjct: 59 SVVLAKPRCYMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + G ++F R+RIG+GRPPG+ DP AF+L+ F A R + T +++ + +LL+
Sbjct: 119 RSVASAL-GTKDFHRVRIGVGRPPGRKDPAAFVLENFTAAERAEVPTIVEQAADATELLI 177
Query: 193 SKGLTESARHFNTIQKY 209
++GL E A+ NT+ +
Sbjct: 178 AQGL-EPAQ--NTVHAW 191
>gi|410453264|ref|ZP_11307222.1| peptidyl-tRNA hydrolase [Bacillus bataviensis LMG 21833]
gi|409933387|gb|EKN70315.1| peptidyl-tRNA hydrolase [Bacillus bataviensis LMG 21833]
Length = 186
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG +Y+ TRHN +GFE+ID + I +N K +G G VLL KP
Sbjct: 4 IVGLGNPGKQYEQTRHN-IGFEVIDTLSNQFSIPLNQSKFKGLYGIGHYKGEKVLLLKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGES + YY++ L ++V +DD+ LP G RLR G GGHNG+KS + +
Sbjct: 63 TYMNLSGESIRAVMDYYQIELEDLVVIYDDLDLPVGKTRLRQKGSPGGHNGIKSTVAHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +EF R+RIGI RP M ++L +F + + A++ + L K +
Sbjct: 122 GTQEFNRIRIGIDRPQAGMSVPDYVLGRFRPDEKPLTEEAVKRSADACSSWLEKPFLQVM 181
Query: 201 RHFN 204
+N
Sbjct: 182 NEYN 185
>gi|163791050|ref|ZP_02185471.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
gi|159873695|gb|EDP67778.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
Length = 191
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D FA + N +A + + F+G VLL KP
Sbjct: 3 MIVGLGNPGSKYKDTKHN-IGFITLDEFAFQHKMVFNKTKFEAIYAEAFIGSEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG + PL Y+ + + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 QTFMNDSGRAVRPLMDYFNVEIEDLIVVYDDLDLPVGKLRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTE 198
+F R+RIGI RP G+ +L F E + A+++ V L + ++
Sbjct: 122 -ATADFNRVRIGIDRPLGKQTVVQHVLSGFPKNQHEELLLAIKDSVAALDYWIEGHSFSD 180
Query: 199 SARHFN 204
FN
Sbjct: 181 VMNQFN 186
>gi|225621396|ref|YP_002722655.1| peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
gi|225216217|gb|ACN84951.1| putative peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
Length = 297
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 108/174 (62%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPGD+YK RHN VGF +ID A++ I+ + K+ + + D +L KP
Sbjct: 4 LIIGLGNPGDEYKNNRHN-VGFILIDKIAQNFNINFDNNKKKSLYARSKEKDIEYILLKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES ++ ++ + ++V +DDM +P G +++ G GGHNG+KS++++
Sbjct: 63 QTFMNLSGESAIFISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISHL 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTAL-QEGVEVLKLLL 192
+ + +F R+RIGIGRP ++L F+ RE +DT + + ++ +K+ L
Sbjct: 123 QSD-DFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREELDTIIANDIIDAVKIAL 175
>gi|357057647|ref|ZP_09118505.1| peptidyl-tRNA hydrolase [Selenomonas infelix ATCC 43532]
gi|355374895|gb|EHG22186.1| peptidyl-tRNA hydrolase [Selenomonas infelix ATCC 43532]
Length = 208
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 113/193 (58%), Gaps = 10/193 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGF----VGDAPVL 75
+ GLGNPG +Y T+HN VGF ++++ A + +N K F +G V
Sbjct: 3 IIAGLGNPGTEYAQTKHN-VGFMLLESLA----VRLNAPAWKEDFFSAITEVRIGGEKVF 57
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SGE+ GP+ +YYK+ + ++V HDDM +P G +R+R GG GGHNG+KS+
Sbjct: 58 LVKPLTYMNNSGEALGPMLSYYKIDADELVVVHDDMDIPAGTVRIRKKGGSGGHNGIKSI 117
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G+ +FAR+RIGIGRPP +L F A +I TA+ + ++ +++ G
Sbjct: 118 LAHV-GSEDFARVRIGIGRPPAGWTVINHVLAPFAAEDVSKIRTAIDYLLPAVECIVTDG 176
Query: 196 LTESARHFNTIQK 208
+ + +N +K
Sbjct: 177 VDLAMNKYNPHKK 189
>gi|114565645|ref|YP_752799.1| aminoacyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|119391030|sp|Q0B0S6.1|PTH_SYNWW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114336580|gb|ABI67428.1| peptidyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 183
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY TRHN +GF++++ A I A G + +LL KP
Sbjct: 3 MLVGLGNPGKKYSHTRHN-IGFKVLEELARRHQIEKEESRYDAIVGHLRINQEKLLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSG++ PL ++KL L+ +LV +DDM LP G +R+R +GG GGH G++S+ +
Sbjct: 62 LTFMNLSGKAVRPLFNWFKLELSELLVVYDDMDLPPGTVRIRASGGTGGHKGMQSICESL 121
Query: 140 RGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+R+F R+RIGIGRPP G +D ++L +F+ + + A+++ ++ + G+
Sbjct: 122 -GSRDFPRIRIGIGRPPGGAID---WVLGEFSESEKPLMQDAIEKAASAIECWVKSGIDA 177
Query: 199 SARHFN 204
S +N
Sbjct: 178 SMNAYN 183
>gi|383639358|ref|ZP_09951764.1| peptidyl-tRNA hydrolase [Streptomyces chartreusis NRRL 12338]
Length = 200
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 112/200 (56%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
T A PWL VGLGNPG +Y G RHN VGF + D A G +A +G +G
Sbjct: 4 TTDAAAPWLIVGLGNPGPEYAGNRHN-VGFMVADLLAGRVGGRFKRAGKAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
V++AKP +YMNLSG L +YK+P+ V+ HD++ + G LRL+ GG
Sbjct: 63 PPGPMSRRVIVAKPMSYMNLSGGPVNALRDFYKVPVAHVVAIHDELDIDYGTLRLKLGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ F ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 123 DNGHNGLKSMTKAF--GADYHRVRFGIGRPPGRMPVADFVLRDFSSAERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 181 DAVECLVIEGLERAQSTYNS 200
>gi|441161197|ref|ZP_20967906.1| peptidyl-tRNA hydrolase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440616781|gb|ELQ79907.1| peptidyl-tRNA hydrolase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 197
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 107/200 (53%), Gaps = 8/200 (4%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG 70
T PWL GLGNPG +Y RHN VGF + D AE +A +G +G
Sbjct: 1 MTTDAEGPWLVAGLGNPGPEYAANRHN-VGFMVADLLAERMRGRFKAHKARAQVVEGRIG 59
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
V++AKP TYMNLSG L +YK+P+ ++ HD++ + G LRL+ GG
Sbjct: 60 PPGPGSRRVVIAKPMTYMNLSGGPVTALRDFYKVPVGNIVAVHDELDIDYGALRLKLGGG 119
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ + E+ R+R GIGRPPG+M F+L+ F+ R+ +D +
Sbjct: 120 DNGHNGLKSITKSL--GAEYHRVRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAA 177
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ GL + +N+
Sbjct: 178 DAVEALIVDGLERAQSAYNS 197
>gi|335040913|ref|ZP_08534033.1| Peptidyl-tRNA hydrolase [Caldalkalibacillus thermarum TA2.A1]
gi|334179217|gb|EGL81862.1| Peptidyl-tRNA hydrolase [Caldalkalibacillus thermarum TA2.A1]
Length = 191
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY TRHN +GF +D AE GIS+N ++ G+ V VLL KP
Sbjct: 3 IIVGLGNPGPKYAQTRHN-IGFLTVDRLAEKLGISINQEKWRSLVGETSVSGEKVLLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGE+ + +++ P+ VLV +DD+ LP G +RLR GGHGGHNG++S++++
Sbjct: 62 LTYMNRSGEAVIEVVRFFQCPVEDVLVIYDDLDLPFGTMRLRLKGGHGGHNGVRSLIDHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTE 198
G++ F R+R+GIGRP D ++L F+ R+++ + G + L + T+
Sbjct: 122 -GSQTFKRIRMGIGRPENG-DVVHYVLNPFHPQERQQLAEFIDRGASAAEAYLDTDDFTQ 179
Query: 199 SARHFN 204
+N
Sbjct: 180 VMNRYN 185
>gi|329941175|ref|ZP_08290454.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
gi|329299706|gb|EGG43605.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
Length = 199
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 9/196 (4%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFA-ESQGISMNTVHCKATFGQGFVG---- 70
A PWL VGLGNPG +Y RHN VGF + D A + G +A +G +G
Sbjct: 7 AAPWLVVGLGNPGPEYAMNRHN-VGFMVADLLAGRTGGRFKRAARTQAQVVEGRMGPPGP 65
Query: 71 -DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
V+L KP +YMNLSG L +YK+PL+ V+ HD++ + GVLRL+ GG GH
Sbjct: 66 GSRRVVLVKPMSYMNLSGGPVNALREFYKVPLSHVVAVHDELDIDYGVLRLKRGGGDNGH 125
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
NGLKS+ E+ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++
Sbjct: 126 NGLKSMTKAM--GAEYHRVRCGIGRPPGRMQVADFVLKDFSSAERKELDWFVDRAADAVE 183
Query: 190 LLLSKGLTESARHFNT 205
L+++GL + +N+
Sbjct: 184 CLVAEGLERAQNTYNS 199
>gi|296125816|ref|YP_003633068.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
gi|296017632|gb|ADG70869.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
Length = 205
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPGD+YK RHN VGF +ID AE+ ++ +T K+ + +G D +L KP
Sbjct: 5 LIIGLGNPGDEYKNNRHN-VGFILIDKIAENLSLNFDTNKKKSLYTRGKSKDIEYILLKP 63
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES ++ ++ + + ++V +DDM +P G +++ G GGHNG+KS++
Sbjct: 64 QTFMNLSGESAIYISKFFNVKTDDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQL 123
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLLL 192
+ +F R+RIGIGRP ++L F+ E ++T + + V E +K L
Sbjct: 124 HSD-DFTRIRIGIGRPNAGKKVNDYVLSNFSKKEMEELNTVIADNVIEAVKTAL 176
>gi|229917411|ref|YP_002886057.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
gi|259535188|sp|C4KZU9.1|PTH_EXISA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229468840|gb|ACQ70612.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
Length = 185
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 2/165 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG K++ TRHN VGF ID AE GIS+N A G G + V+L KP
Sbjct: 4 IVGLGNPGKKFEMTRHN-VGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE+ P+ YYK+ ++ +LV +DD+ + G LR R G GGHNG+KS++ +
Sbjct: 63 TYMNLSGEAVRPILDYYKIEIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
G EF RL++GIGRPP + ++L + ++ L V
Sbjct: 122 GTAEFKRLKLGIGRPPHPIKVVDWVLMNYRKDELPELNETLDNAV 166
>gi|347751667|ref|YP_004859232.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
gi|347584185|gb|AEP00452.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
Length = 185
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 104/174 (59%), Gaps = 2/174 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG +Y+ TRHN +GFE+++ AE K + V VLL KP
Sbjct: 4 IVGLGNPGAQYEHTRHN-IGFEVVNLLAERLQAPFKQSKFKGLCAETTVNSGKVLLLKPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGES + YY+L +LV +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGESVKAVMDYYRLGTGDLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSIIHHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
G +EF R+RIGIGRP ++L +F+ RE++ A+++G + + L K
Sbjct: 122 GTQEFNRIRIGIGRPDRDAYMPDYVLGRFSKEDREKMQLAVEKGADACEAWLEK 175
>gi|156741710|ref|YP_001431839.1| peptidyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
gi|189038162|sp|A7NK01.1|PTH_ROSCS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156233038|gb|ABU57821.1| Aminoacyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
Length = 214
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 106/188 (56%), Gaps = 3/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG+ Y TRHN +GF ++ A+ + KA +G + V LA
Sbjct: 2 WLIVGLGNPGETYARTRHN-IGFRVVTELAQRHHLRFTHKRAKAEIAEGEIAGQRVALAL 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSG++ L +YK+ P +LV +DD+ LP GVLRLR G G HNG++S++
Sbjct: 61 PQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIV- 119
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G++ F RLRIGI RPP + ++L +F ++ + + L+L+L +G+
Sbjct: 120 ALLGSQVFPRLRIGIDRPPVAWNLADYVLARFTPEQEAQLPEVTRRAADALELVLREGIV 179
Query: 198 ESARHFNT 205
+ N
Sbjct: 180 VAMNRINA 187
>gi|410865574|ref|YP_006980185.1| Peptidyl-tRNA hydrolase [Propionibacterium acidipropionici ATCC
4875]
gi|410822215|gb|AFV88830.1| Peptidyl-tRNA hydrolase [Propionibacterium acidipropionici ATCC
4875]
Length = 200
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 117/200 (58%), Gaps = 13/200 (6%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDA--- 72
+PWL VGLGNPG Y TRH+ VG ++ G ++++ +A + + DA
Sbjct: 3 QPWLVVGLGNPGPAYAATRHS-VGAMVVAELCRRAGETLSSARGLRAETARTRISDAGLG 61
Query: 73 -------PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
PV+L + +TYMN SG + +A + ++P+ R++V HD++ L G +R++ GG
Sbjct: 62 MPAAQAVPVVLMRSRTYMNDSGVAVRKVADFDRIPVGRIIVVHDEIDLDLGRIRIKAGGG 121
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGL+S+ ++ R +F R+R+G+GRPPG+ DP ++L+KF A R D +
Sbjct: 122 DNGHNGLRSMRSHLRSG-DFLRVRVGVGRPPGRQDPADYVLKKFAAGERAEADLQVSLAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+++GL + FN+
Sbjct: 181 DAVECLMTQGLGAAQNRFNS 200
>gi|400537666|ref|ZP_10801188.1| peptidyl-tRNA hydrolase [Mycobacterium colombiense CECT 3035]
gi|400328710|gb|EJO86221.1| peptidyl-tRNA hydrolase [Mycobacterium colombiense CECT 3035]
Length = 191
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 114/184 (61%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPGD Y TRHN VGF + D A+ G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHN-VGFMVADLLAQRMG-SKFKAHKRSGAEIVSGRLAGH 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL
Sbjct: 59 SVVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV N G+++F R+RIGIGRPPG+ DP AF+L+ F+A R + T ++ + +LL+
Sbjct: 119 RSVANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLEAFSAAERPEVPTICEQAADATELLI 177
Query: 193 SKGL 196
GL
Sbjct: 178 ELGL 181
>gi|328952986|ref|YP_004370320.1| peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
gi|328453310|gb|AEB09139.1| Peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
Length = 199
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LF+GLGNPG +YK TRHN VGF++ID ++ GIS+N C A +G+G V+LA+P
Sbjct: 3 LFIGLGNPGFRYKRTRHN-VGFQIIDVLSQRWGISLNRHTCSAQWGRGGWAGQEVVLAQP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+TYMNLSG + L A+++L +L+ HDD+ LP G L+ GG GGH G+ S++N
Sbjct: 62 ETYMNLSGRAVFRLLAFFQLSAADLLIIHDDLDLPLGRLKFVLRGGAGGHRGVASIINTI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
EF RL++GIGRP + ++L + + + + L+ +L GL ++
Sbjct: 122 H-TTEFLRLKVGIGRPQYGETVENYVLSPCYPAEIDTYASMIDRTADALEAVLKVGLNQA 180
Query: 200 ARHFN 204
F+
Sbjct: 181 MSLFH 185
>gi|431807724|ref|YP_007234622.1| peptidyl tRNA hydrolase [Brachyspira pilosicoli P43/6/78]
gi|430781083|gb|AGA66367.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli P43/6/78]
Length = 198
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG++YK RHN +GF +ID A++ + + K+ F + + + +L KP
Sbjct: 4 LVIGLGNPGEEYKNHRHN-IGFIIIDKLAQNLSLKFDNNKKKSLFTRAKLNNTDFILLKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES ++ ++ + ++V +DDM +P G+ +++ G GGHNG+KS++
Sbjct: 63 QTFMNLSGESAIYISKFFNIKPEDIIVIYDDMDIPFGIFKIKKGGSSGGHNGIKSLIAQL 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLLLSKGLTE 198
+ + +F RLR+GIGRP ++L F+ RE ID L E V E +K +L + T
Sbjct: 123 QTD-DFIRLRVGIGRPSFGKKVNDYVLSSFSKSERENIDNDLGENVIEAIKTILFESYTI 181
Query: 199 SARHFN 204
+ +N
Sbjct: 182 AQNKYN 187
>gi|325282473|ref|YP_004255014.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
gi|324314282|gb|ADY25397.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
Length = 210
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 110/192 (57%), Gaps = 9/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQG----ISMNTVHCKATFGQGFVGDA--P 73
L VGLGNPG+KY TRHN VG+ ++D A G C+ GQG G A
Sbjct: 3 LIVGLGNPGEKYAATRHN-VGWLVVDELARRTGGHWRKDGEAETCEVRLGQGG-GQAGEK 60
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
VLL KPQT+MN SG + PL +YY+L + +LV DD+ P G+L+LR G HGG NGL+
Sbjct: 61 VLLVKPQTFMNSSGRAVAPLLSYYRLAPDDLLVVQDDLDSPFGLLKLRRGGRHGGQNGLR 120
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
++ G ++F RL+IGI RPP DP ++L ++ R ++ + G + ++
Sbjct: 121 DII-RLLGTQDFDRLKIGISRPPPGRDPADWVLSRWAEAERPVLERLVDLGAQAAEVWTL 179
Query: 194 KGLTESARHFNT 205
+G+ E+ FN+
Sbjct: 180 QGMQEAQGRFNS 191
>gi|345018829|ref|YP_004821182.1| peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344034172|gb|AEM79898.1| Peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 184
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+GTRHN +GF +ID A+ G+++ + K+ G+G ++L K
Sbjct: 2 YVIAGLGNPGKEYEGTRHN-IGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE+ +YK+ L V+V +DD L G +R+R G GGHNG+KS++
Sbjct: 61 PQTFMNSSGEALYDAVNFYKILLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMKSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ EF R+RIGIG+P Q D + +L KF ++ ID A+ + + + ++ G+
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMSKFN 183
>gi|251794073|ref|YP_003008804.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
gi|247541699|gb|ACS98717.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
Length = 186
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG Y+ TRHN VGF +ID A I + CKA G+G V V+L K
Sbjct: 3 WI-VGLGNPGTTYQSTRHN-VGFMVIDELARRWNIQVTQSKCKALIGEGNVQGTKVVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES Y+K L L+ +DDM G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGESVRGFMDYFKADLEDGLIVYDDMDTEVGKVRLRYQGSAGGHNGIKSLIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G ++F R+R+G+ RP + ++L F +E + + +++ + ++ L
Sbjct: 121 L-GTQQFNRIRMGVSRPQPGRNIADYVLDNFPKSEQEALKSMIEQACDAVEYSLKASFDN 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|379734255|ref|YP_005327760.1| peptidyl-tRNA hydrolase [Blastococcus saxobsidens DD2]
gi|378782061|emb|CCG01718.1| peptidyl-tRNA hydrolase [Blastococcus saxobsidens DD2]
Length = 195
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 5/185 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM---NTVHCKATFGQGFVGDAPV 74
P+L VGLGNPG Y G RHN VG ++D A GI+ +A G+G + V
Sbjct: 5 PYLVVGLGNPGPGYAGNRHN-VGAMVLDELARRAGITPAPGKGARARAVAGEGRLAGRRV 63
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+LA+P TYMN SG L YYKLP ++++V HD++ +P G +RL+ GG GGHNGL+S
Sbjct: 64 VLAQPLTYMNESGSPVRGLLDYYKLPADQLVVLHDELDIPFGSVRLKRGGGEGGHNGLRS 123
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ + G +E+ R+R+GIGRPPG+ DP F+L+ F+A R+ +D L E + ++ LL+
Sbjct: 124 ITRSA-GTKEYLRVRVGIGRPPGRQDPADFVLKDFSATERKELDLLLVEAADAVEELLTL 182
Query: 195 GLTES 199
GL +
Sbjct: 183 GLEAA 187
>gi|443315580|ref|ZP_21045063.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 6406]
gi|442784815|gb|ELR94672.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 6406]
Length = 213
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 115/192 (59%), Gaps = 7/192 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLL 76
P L VGLGNPG+KY TRHN +GFE++D A +++ + + +G+G+ V L
Sbjct: 13 PRLVVGLGNPGEKYAKTRHN-IGFEVVDTLAHRWQVALASQAKFQGIYGEGWAAGHKVGL 71
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KPQTYMN SG+S + +YK+ VLV +DDM L G LRLR +G GGHNG+KS++
Sbjct: 72 LKPQTYMNRSGQSVRAVLDWYKVEPEAVLVIYDDMDLATGRLRLRLSGSAGGHNGMKSLI 131
Query: 137 NNFRGNREFARLRIGIGR----PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+ G ++F RLR+GIGR PG A +L + +A R ++ + +V+++ L
Sbjct: 132 AHL-GGQDFPRLRLGIGRTATGEPGDRAVVAHVLGRPSAAERAHMEEVVTLAADVVEMAL 190
Query: 193 SKGLTESARHFN 204
+G+ ++ FN
Sbjct: 191 REGVEKAMSRFN 202
>gi|402814487|ref|ZP_10864081.1| peptidyl-tRNA hydrolase Pth [Paenibacillus alvei DSM 29]
gi|402508334|gb|EJW18855.1| peptidyl-tRNA hydrolase Pth [Paenibacillus alvei DSM 29]
Length = 186
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG +Y TRHN +GF ID+ A+ GI + CKA G+G VG ++L K
Sbjct: 3 WI-VGLGNPGTEYAATRHN-IGFMAIDSLADRFGIQVRESKCKALIGEGRVGTEKIVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ YYK + +V +DDM G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGEAVRAYMDYYKADIEDFIVLYDDMDTELGKIRLRYQGSAGGHNGIKSLIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F + + ++ + ++ L +
Sbjct: 121 L-GTQSFNRIRMGISRPEPGRSIVDYVLSTFPKAGADDLRQTIERTCDAVEFSLKHSFEQ 179
Query: 199 SARHFN 204
+ +N
Sbjct: 180 TMAKYN 185
>gi|260589952|ref|ZP_05855865.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|331084271|ref|ZP_08333376.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539759|gb|EEX20328.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|330401806|gb|EGG81383.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 195
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 117/192 (60%), Gaps = 3/192 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y+ TRHN +GF+++D + I + KA +G+G +G V++ KP
Sbjct: 3 LIAGLGNPGKQYEKTRHN-MGFDVVDELIDRHEIPQAGIAHKALYGKGIIGGEKVIVEKP 61
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
TYMNLSGES YYK+ P ++V +DD+ L G +R+R G GGHNG+K+++
Sbjct: 62 LTYMNLSGESVREFIDYYKMDPETEMIVIYDDIDLEPGQIRIRKKGSAGGHNGIKNIIAQ 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+++G+G P D ++L +F++ RE +D A+Q+ + +++++ KG+
Sbjct: 122 L-GTQNFYRIKVGVGAKPKGWDLADYVLGRFSSKEREVVDAAIQDAADAVEMIIEKGIDA 180
Query: 199 SARHFNTIQKYK 210
+ H+N K K
Sbjct: 181 AMNHYNGSGKKK 192
>gi|325295184|ref|YP_004281698.1| peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065632|gb|ADY73639.1| Peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 189
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 102/177 (57%), Gaps = 3/177 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP-VLLAK 78
L VGLGNPG KY+ TRHN VG+ ++D AE G + K + D + L K
Sbjct: 4 LIVGLGNPGKKYEKTRHN-VGWMVLDRLAEVLGTDFSKEKFKGKIAELRNDDGKKIFLLK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES G LA +YK+ LV +DD+ LP G LRLR G GGH G+ S+
Sbjct: 63 PITYMNLSGESVGELAKFYKIKPEETLVIYDDLDLPLGKLRLRLKGSSGGHKGVASIEQC 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
F G++ F+RLRIGIGRP + + ++L F E + A+ + V LK ++ KG
Sbjct: 123 F-GSQNFSRLRIGIGRPQTKEEVVNYVLSPFREDELEALGKAIDKAVSCLKEVIKKG 178
>gi|118473398|ref|YP_889671.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|399989670|ref|YP_006570020.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|166229422|sp|A0R3D3.1|PTH_MYCS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|399124831|pdb|2LGJ|A Chain A, Solution Structure Of Mspth
gi|118174685|gb|ABK75581.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|399234232|gb|AFP41725.1| Peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
Length = 191
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 122/197 (61%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN +GF + D A G S VH K A G +
Sbjct: 1 MAEPLLVVGLGNPGPTYAKTRHN-LGFMVADVLAGRIG-SAFKVHKKSGAEVVTGRLAGT 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ YMN SG GPLA +Y +P +++V HD++ + G +RL+ GG GGHNGL
Sbjct: 59 SVVLAKPRCYMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + G + F R+RIG+GRPPG+ DP AF+L+ F A R + T +++ + +LL+
Sbjct: 119 RSVASAL-GTKNFHRVRIGVGRPPGRKDPAAFVLENFTAAERAEVPTIVEQAADATELLI 177
Query: 193 SKGLTESARHFNTIQKY 209
++GL E A+ NT+ +
Sbjct: 178 AQGL-EPAQ--NTVHAW 191
>gi|94264422|ref|ZP_01288212.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93455179|gb|EAT05397.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAK 78
L GLGNPG KY+ TRHN +GF ID A GIS+ +A G+G + PV+L K
Sbjct: 3 LVAGLGNPGAKYEDTRHN-IGFLFIDHLARRHGISLKEESKWEAASGRGTLWGQPVMLVK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG + G LA +Y++ V VFHD++ LP G R+ G GGHNG++S++++
Sbjct: 62 PLTYMNLSGRAVGRLARFYRIEAEAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLIDH 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERI 177
G+R+F R R+G+GRPP Q ++L F+ R+ +
Sbjct: 122 L-GSRDFVRFRLGVGRPPEQHPTAGYVLSSFSPAERQAL 159
>gi|94986155|ref|YP_605519.1| peptidyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
gi|119390934|sp|Q1IWN4.1|PTH_DEIGD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94556436|gb|ABF46350.1| Aminoacyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
Length = 214
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 110/188 (58%), Gaps = 6/188 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---VLL 76
L VGLGNPG +Y TRHN VG+ ++D A G + A + +G AP VLL
Sbjct: 3 LVVGLGNPGSQYAQTRHN-VGWLVVDEVARRWGAVWHP-DKDAEVAELRMGAAPGEKVLL 60
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KPQT+MN SG + GPL A+YKL +LV DD+ P G+L+ R G HGG NG++ ++
Sbjct: 61 VKPQTFMNSSGRAVGPLFAFYKLEPAALLVVQDDLDSPFGLLKFRLGGRHGGQNGVRDII 120
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G ++FARL+IGI RPP +P ++L ++ A E + ++ G + +++ +S GL
Sbjct: 121 RVL-GTQDFARLKIGISRPPAGWNPADWVLSRWRAEEAETLAELVRLGADAVEVWVSHGL 179
Query: 197 TESARHFN 204
E FN
Sbjct: 180 AEGQARFN 187
>gi|328949925|ref|YP_004367260.1| peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
gi|328450249|gb|AEB11150.1| Peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
Length = 194
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 106/198 (53%), Gaps = 11/198 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV--HCKATFGQGFVGDAPVLLA 77
L VGLGNPG +Y TRHN VGF ++D + G+ T A +G G+ L
Sbjct: 5 LIVGLGNPGPRYARTRHN-VGFMILDRLDQDLGLDWRTRGNALVARWGAGW-------LM 56
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP TYMNLSGE+ P YY++PL R+LV HDD+ LP G LR R G GG G+ S++
Sbjct: 57 KPLTYMNLSGEAVAPFVRYYRIPLARLLVVHDDLDLPLGRLRFRARGSSGGQRGVASIIA 116
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+ F RL++GIGRPP ++L FN + + E +++ L +GL
Sbjct: 117 HL-GSEAFPRLKVGIGRPPAGWSAPDWVLSPFNPEELPLVTRVVDRAAEGVRVWLEEGLA 175
Query: 198 ESARHFNTIQKYKHIRLQ 215
+ + +N + + L
Sbjct: 176 RAQQRYNGLDLAQEADLD 193
>gi|260887179|ref|ZP_05898442.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|330839054|ref|YP_004413634.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|260863241|gb|EEX77741.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|329746818|gb|AEC00175.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 111/190 (58%), Gaps = 4/190 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y T+HN VGF ++DA AE G+ A +G +G VLL KP
Sbjct: 3 IIAGLGNPGAEYARTKHN-VGFMLVDALAERLGVDAWREKFNALTAEGRIGAQKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + GPL +YKL ++V HDDM + G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNESGRAVGPLLDWYKLAPEDLIVAHDDMDIAAGTIRLRRKGSAGGHNGIKSLLAHI 121
Query: 140 RGNREFARLRIGIGRP-PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F+R+RIGIGRP PG K +L F A +I A+ + ++ +++ G+
Sbjct: 122 -GSEDFSRVRIGIGRPLPGWTVVK-HVLAPFPADDAPKIQEAISYLLPAVECIVTDGIDM 179
Query: 199 SARHFNTIQK 208
+ +N +K
Sbjct: 180 AMNRYNPRRK 189
>gi|166031179|ref|ZP_02234008.1| hypothetical protein DORFOR_00865 [Dorea formicigenerans ATCC
27755]
gi|166029026|gb|EDR47783.1| aminoacyl-tRNA hydrolase [Dorea formicigenerans ATCC 27755]
Length = 203
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 110/196 (56%), Gaps = 3/196 (1%)
Query: 10 GFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV 69
G V + GLGNP +Y+GTRHN VGF++ID AE I+++ +A G+G +
Sbjct: 2 GRDKEVENMIIIAGLGNPTKEYEGTRHN-VGFQVIDKIAEKYNIAVDAKKGRAYVGKGII 60
Query: 70 GDAPVLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGG 128
VLL KPQTYMNLSGES L Y+K+ P +LV +DD+ L G +R+R G GG
Sbjct: 61 EGQKVLLVKPQTYMNLSGESIRELVDYFKVDPKEELLVIYDDISLNPGQIRIRKKGSAGG 120
Query: 129 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
HNG+K+++ G F R+++G+G P D A++L F+ E ++ ++ +
Sbjct: 121 HNGIKNIIAQL-GTDTFQRIKVGVGEKPKGYDLAAYVLGHFHGEDLELVEEGYEKAISAT 179
Query: 189 KLLLSKGLTESARHFN 204
+ +L + + +N
Sbjct: 180 EEILKGEIDAAMNEYN 195
>gi|167766178|ref|ZP_02438231.1| hypothetical protein CLOSS21_00672 [Clostridium sp. SS2/1]
gi|317499347|ref|ZP_07957617.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429762584|ref|ZP_19294972.1| aminoacyl-tRNA hydrolase [Anaerostipes hadrus DSM 3319]
gi|167712258|gb|EDS22837.1| aminoacyl-tRNA hydrolase [Clostridium sp. SS2/1]
gi|291560115|emb|CBL38915.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SSC/2]
gi|316893382|gb|EFV15594.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429181404|gb|EKY22567.1| aminoacyl-tRNA hydrolase [Anaerostipes hadrus DSM 3319]
Length = 188
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 116/189 (61%), Gaps = 10/189 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY TRHN +GFE +D A+ +GIS+NT KA G G++G VLL KP
Sbjct: 3 VIVGLGNPGKKYDNTRHN-IGFEALDYIADKEGISINTGKHKALIGTGYMGGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES P+ +YKL ++ HDD+ L G LR+R G GGHNGLKS++++
Sbjct: 62 QTFMNLSGESLRPIMDFYKLEPEDFIIIHDDIDLDVGRLRIRRKGSAGGHNGLKSIISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLKLLLSKG 195
G+ +F R++IG+G P D ++L F AI ER D E + ++L++
Sbjct: 122 -GSMDFPRVKIGVGEKPKGYDLADYVLGHFTKEEQAIFAERFD----EVYDAVQLIVMGD 176
Query: 196 LTESARHFN 204
+TE+ N
Sbjct: 177 ITEAMNRHN 185
>gi|427727442|ref|YP_007073679.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7524]
gi|427363361|gb|AFY46082.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7524]
Length = 211
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV- 69
+A+ P L VGLGNP KY TRHN +GF ++A A S I + + FG+G
Sbjct: 7 SSALVIPQLIVGLGNPEPKYDQTRHN-IGFAAVEALARSWQIPLAENRKFQGEFGEGIAP 65
Query: 70 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
G V L KP TYMN SG++ + ++YKLP VLV +DDM LP G RLR +G GGH
Sbjct: 66 GGVKVRLLKPLTYMNRSGQAIQAVTSWYKLPAESVLVIYDDMDLPIGKTRLRLSGSAGGH 125
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQM-----DPKAFLLQKFNAIARERIDTALQEG 184
NG+KS + + + F RLRIGIG+P + D +++L KF + + LQ
Sbjct: 126 NGMKSAIAHLN-TQNFPRLRIGIGKPKNAVNGDNSDTVSYVLGKFTTTETQLMSLVLQFV 184
Query: 185 VEVLKLLLSKGLTESARHFNT 205
VE ++L L +G+ ++ N+
Sbjct: 185 VECVELSLKQGVEKAMNRCNS 205
>gi|153854682|ref|ZP_01995932.1| hypothetical protein DORLON_01930 [Dorea longicatena DSM 13814]
gi|149752786|gb|EDM62717.1| aminoacyl-tRNA hydrolase [Dorea longicatena DSM 13814]
Length = 194
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+GTRHN VGF++ID A+ IS++ +A G+G + VLL K
Sbjct: 2 FIIAGLGNPTLQYEGTRHN-VGFDVIDMLADRYNISVDGRKGRALVGKGIIEGQKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYK+ + +LV +DD+ L G LR+R G GGHNG+K+++
Sbjct: 61 PQTYMNLSGESLRELVNYYKIDEEHELLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
N G F R++IG+G P + D ++L F+ RE ++ + ++L+ +
Sbjct: 121 NL-GTDVFPRIKIGVGEKPKKYDLADYVLGHFSKEDRELMEEGYDRADHAVGMILNGEIE 179
Query: 198 ESARHFN 204
+ +N
Sbjct: 180 AAMNQYN 186
>gi|167036598|ref|YP_001664176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115025|ref|YP_004185184.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687682|sp|B0KBG1.1|PTH_THEP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166855432|gb|ABY93840.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928116|gb|ADV78801.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 184
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+GTRHN VGF +ID A+ G+++ + K+ G+G ++L K
Sbjct: 2 YVIAGLGNPGREYEGTRHN-VGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT++N SGE+ +YK+PL V+V +DD L G +R+R G GGHNG+ S++
Sbjct: 61 PQTFVNSSGEALYDAVNFYKIPLENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ EF R+RIGIG+P Q D + +L KF ++ ID A+ + + + ++ G+
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMSKFN 183
>gi|339443834|ref|YP_004709838.1| peptidyl-tRNA hydrolase [Eggerthella sp. YY7918]
gi|338903586|dbj|BAK43437.1| peptidyl-tRNA hydrolase [Eggerthella sp. YY7918]
Length = 185
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG++Y+ TRHN GF+ +DA A G C A +G D ++LAK
Sbjct: 2 FLIVGLGNPGEEYEHTRHN-AGFDTVDAIAAEVGARYWKTECGALTAKGVFRDHDLVLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQ++MN SG L Y + + +++ HD++ + G +R++ GGH GHNGL+S+ +
Sbjct: 61 PQSFMNTSGGPVKQLMNAYGIDADHLIIIHDELDIDPGTIRVKFGGGHAGHNGLRSICDK 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G R++ R+RIGIGRPPG+M ++L + A + A+ G + L+++GL +
Sbjct: 121 L-GTRDWFRVRIGIGRPPGRMPVVDWVLSRPRKEAADDFTFAVDRGAQAALSLVNEGLEK 179
Query: 199 SARHFN 204
+ + FN
Sbjct: 180 TQQAFN 185
>gi|334128115|ref|ZP_08502014.1| aminoacyl-tRNA hydrolase [Centipeda periodontii DSM 2778]
gi|333388239|gb|EGK59421.1| aminoacyl-tRNA hydrolase [Centipeda periodontii DSM 2778]
Length = 212
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y T+HN VGF + DA A+ ++ + +G V L KP
Sbjct: 3 IIAGLGNPGADYAHTKHN-VGFMLADALADRWNAPAWKEDFFSSVTEVRIGGEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGE+ GP+ +YYK+ ++ + V HDDM +P G +R+R G GGHNG+KS++ +
Sbjct: 62 LTYMNNSGEALGPMLSYYKMDVDDLTVVHDDMDIPSGTVRIRRKGSSGGHNGIKSIIAHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ +FAR+RIGIGRPP +L F+A +I A+ + ++ +++ G+ +
Sbjct: 122 -GSEDFARVRIGIGRPPAGWTVINHVLAPFSAEDAPKIRGAIDYLLPAVECIVTNGVDFA 180
Query: 200 ARHFNTIQK 208
H+N +K
Sbjct: 181 MNHYNPHKK 189
>gi|255659622|ref|ZP_05405031.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
gi|260848183|gb|EEX68190.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
Length = 216
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
+ GLGNPG +Y T+HN VGF IDA A++ G+S + K A +G V+L
Sbjct: 3 IIAGLGNPGAEYAKTKHN-VGFMFIDALADALGLSASDWKDKFEAKVADARIGTEKVVLV 61
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SG + GPL +YKL ++V HDDM +P G +R+R G GGHNG+KS++
Sbjct: 62 KPQTYMNESGRAVGPLMNWYKLAPEDLIVVHDDMDIPAGTIRIRKKGSAGGHNGIKSILA 121
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G+ FAR+RIGIGRP +L F + +I A+ + ++ +++ +
Sbjct: 122 HV-GDEHFARVRIGIGRPLPGWTVVNHVLAGFPEEEQPKIREAIDYLIPAVECIVTHDVD 180
Query: 198 ESARHFN 204
+ FN
Sbjct: 181 MAMNQFN 187
>gi|408794222|ref|ZP_11205827.1| aminoacyl-tRNA hydrolase [Leptospira meyeri serovar Hardjo str.
Went 5]
gi|408461457|gb|EKJ85187.1| aminoacyl-tRNA hydrolase [Leptospira meyeri serovar Hardjo str.
Went 5]
Length = 188
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPGDKYK TRHN +GF ++DA A S G+S GD V L K
Sbjct: 4 FLIVGLGNPGDKYKNTRHN-IGFMILDALASSFGVSFKDSKKYMETTHSLEGDK-VHLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P +MNLSG++T LA YK+P +R+LV D++ LP G ++ + GG GHNGLK ++
Sbjct: 62 PLEFMNLSGKATQTLANLYKIPPSRILVIQDEVDLPFGKIKNKIGGGTAGHNGLKDIVAK 121
Query: 139 FRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGV 185
G+++F RLR G+G+P G M+ F+LQ FN+ + +D ++E V
Sbjct: 122 L-GSQDFHRLRFGVGKPEKGGMEVADFVLQNFNSEEKNSLDALIKESV 168
>gi|342215333|ref|ZP_08707980.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586223|gb|EGS29623.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 193
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ TRHN VGF +ID +++ I +N CK +GQG + L KP
Sbjct: 3 VIVGLGNPGKQYENTRHN-VGFNVIDLLSQTLSIPVNKAKCKGLYGQGTRNGEKIFLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGES Y+ +P+ VLV DD+ + ++++ G G HNGLKS++
Sbjct: 62 QTYMNNSGESVQEFIRYFNIPIQDVLVLVDDIDIDFTEIKIKAKGSAGTHNGLKSII-AM 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+++F RL+IG+G+ + + F+L +F +E ++ L E +L G++
Sbjct: 121 TGSQDFPRLKIGVGKKHPEENLANFVLGRFPRDQQEEMEQCLDRAAEAAIAILDHGVSYG 180
Query: 200 ARHFN 204
HFN
Sbjct: 181 MNHFN 185
>gi|347524854|ref|YP_004831602.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 27782]
gi|345283813|gb|AEN77666.1| Peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 27782]
Length = 187
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGN G +Y TRHN GF ID FAE N A G + V+LAKP
Sbjct: 3 LIVGLGNIGKEYDETRHN-AGFMTIDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG S + +YKL VL+ HDDM L G LRLR G GGHNG+KS++ +
Sbjct: 62 TTYMNESGRSVRQIVDFYKLDPEDVLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F RLRIGI P Q ++L +F++ R D + E V+ + L
Sbjct: 122 -GTEKFKRLRIGIDHPAKQK-VVDWVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|218441393|ref|YP_002379722.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
gi|218174121|gb|ACK72854.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
Length = 210
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 123/216 (56%), Gaps = 23/216 (10%)
Query: 7 LRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQ 66
+ +G T ++ P L +GLGNP +KY+ TRHN +GFE +D A+ +S F Q
Sbjct: 1 MTKGNLTDLSIPQLIIGLGNPEEKYEKTRHN-IGFEAVDLLAKMWQLSW---QQNKRF-Q 55
Query: 67 GFV--GDAP----VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 120
GF G P + L KP TYMN SGES + +YKLP+ +LV +DDM LP G +RL
Sbjct: 56 GFFTEGTGPNHQKIRLLKPLTYMNRSGESVRAVIDWYKLPVESILVIYDDMDLPLGRIRL 115
Query: 121 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA--------- 171
R +G GGHNG+KS++++ G + F RLRIGIG+ + + + +L +F+A
Sbjct: 116 RLSGSAGGHNGIKSIISHV-GGQNFPRLRIGIGKSNQKKETISHVLGRFSADENQIMSEV 174
Query: 172 --IARERIDTALQEGVEVLKLLLSKGLTESARHFNT 205
+ E T+L+EGVE L + + ES+ NT
Sbjct: 175 LQLVEEATKTSLKEGVEKAMSLYNNRVIESSIFENT 210
>gi|56961863|ref|YP_173585.1| peptidyl-tRNA hydrolase [Bacillus clausii KSM-K16]
gi|68052898|sp|Q5WAD6.1|PTH_BACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56908097|dbj|BAD62624.1| peptidyl-tRNA hydrolase stage V sporulation protein C [Bacillus
clausii KSM-K16]
Length = 185
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY+ TRHN +GF++ID A+ + ++ KA +G+ +G V+L KP
Sbjct: 3 LVVGLGNPGKKYEHTRHN-IGFDIIDRCAQKLDLPLDKQKFKAIYGEKRIGSEKVVLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE+ P Y+ + + ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGEAVRPFMDYFNISNDELVVIYDDLDLPVGKIRLRKKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+R+GIGRP ++L + ++ A ++ + ++ L K E
Sbjct: 122 -GTEDFNRIRVGIGRPAHGEPVVHYVLDTYRKEELAFMNEAAEKSAKAIEAWLEKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNTFN 185
>gi|302390886|ref|YP_003826706.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
gi|302202963|gb|ADL11641.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
Length = 185
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY TRHN +GF +ID FA+ + I + +A G + V+LAKP
Sbjct: 3 LVVGLGNPGFKYAATRHN-IGFRVIDNFADKKQIKIEKEEQEALTGSLYFKGEKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + G L +Y + V++ +DD+ L G LR++ +GGHGGHNG+KSV N+
Sbjct: 62 QTYMNNSGRAVGKLVNWYDIAPENVIIIYDDLDLNTGHLRIKSSGGHGGHNGVKSVFNHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ + +R++IGIGRPP M ++L KF+ R++ A++E VE + ++L +G+ ++
Sbjct: 122 -GSTDISRIKIGIGRPPEYMTVPDYVLGKFDKEERDKAARAVREAVEAIGVILDQGIEQA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNKYN 185
>gi|295108813|emb|CBL22766.1| peptidyl-tRNA hydrolase [Ruminococcus obeum A2-162]
Length = 192
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GF++ID E + V A +G+G +G PV+L K
Sbjct: 2 YLIVGLGNPGRQYEATRHN-MGFDVIDKLVEEYQVPQAGVKFNAMYGKGRIGGQPVILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P +YMNLSG +A Y+K+ P ++V +DD+ L G LR+R G GGHNG+K ++
Sbjct: 61 PLSYMNLSGGPIREMANYFKIDPETEMIVVYDDIDLDPGQLRIRKKGSAGGHNGIKHIIQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G + F R+++G+G P D ++L +F+ R I+ A + + ++L+L+ +
Sbjct: 121 QL-GTQNFVRIKVGVGAKPKGWDLADYVLGRFDKEDRALIEEAQERACKAVELILTDSVD 179
Query: 198 ESARHFN 204
+ +N
Sbjct: 180 AAMNEYN 186
>gi|427735456|ref|YP_007055000.1| peptidyl-tRNA hydrolase [Rivularia sp. PCC 7116]
gi|427370497|gb|AFY54453.1| peptidyl-tRNA hydrolase [Rivularia sp. PCC 7116]
Length = 219
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 113/193 (58%), Gaps = 8/193 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFV-GDAPVL 75
P L VGLGNP KY TRHN +GF IDA + S S++ K + + G V
Sbjct: 16 PQLIVGLGNPEPKYDRTRHN-IGFAAIDALSRSWQASLSENRKFKGEYAETTAPGGKKVY 74
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMNLSG+S G + ++YKL VL+ +DDM LP G +RLR +G GGHNG+KS
Sbjct: 75 LLKPLTYMNLSGQSIGAVLSWYKLKPESVLIIYDDMDLPVGRVRLRLSGAAGGHNGMKST 134
Query: 136 MNNFRGNREFARLRIGIGRP--PGQMD--PKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+++ G++ F RLRIGIGRP P D + +L KF+ E + + L VE ++L
Sbjct: 135 ISHL-GSKNFPRLRIGIGRPKNPATSDNGTVSHVLGKFSPEENEVMSSVLNYVVECVELC 193
Query: 192 LSKGLTESARHFN 204
L KG+ ++ N
Sbjct: 194 LKKGVEKAMNDCN 206
>gi|386385802|ref|ZP_10071045.1| peptidyl-tRNA hydrolase [Streptomyces tsukubaensis NRRL18488]
gi|385666740|gb|EIF90240.1| peptidyl-tRNA hydrolase [Streptomyces tsukubaensis NRRL18488]
Length = 203
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH------CKATFGQGFVGD 71
PWL VGLGNPG Y RHN VGF + D A+ G S + G G
Sbjct: 13 PWLIVGLGNPGPGYAANRHN-VGFMVADLLADRIGGSFKRGQKAQAQIVEGRLGSPGPGS 71
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP +YMNLSG L +YK+P+ ++ HD++ + GVLRL+ GG GHNG
Sbjct: 72 RRVVLAKPMSYMNLSGGPVTALRDFYKIPVANIVAVHDELDIDYGVLRLKIGGGDNGHNG 131
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ + E+ R+R GIGRPPG+M F+L+ F+ R+ +D + + ++ L
Sbjct: 132 LKSITKSL--GPEYHRVRFGIGRPPGRMPVADFVLKDFSGAERKELDYFVDRAADAVEAL 189
Query: 192 LSKGLTESARHFNT 205
+ +GL + +N+
Sbjct: 190 VIEGLERAQSTYNS 203
>gi|428210015|ref|YP_007094368.1| peptidyl-tRNA hydrolase [Chroococcidiopsis thermalis PCC 7203]
gi|428011936|gb|AFY90499.1| peptidyl-tRNA hydrolase [Chroococcidiopsis thermalis PCC 7203]
Length = 225
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 8/193 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLL 76
P L VGLGNP KY TRHN +GF +DA A + I + + + FG+G + L
Sbjct: 18 PQLIVGLGNPEPKYDQTRHN-IGFAAVDAIARAWQIPLADNRKFQGIFGEGRSNAGKIRL 76
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP TYMN SG++ + +YKLP VL +DDM LP G +RLR +G GGHNG+KS +
Sbjct: 77 LKPLTYMNNSGQAIRAVTDWYKLPPESVLAIYDDMDLPLGKIRLRLSGSAGGHNGMKSAI 136
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVEVLKLL 191
+ G + F RLRIGIGRP G + +++L +F++ + LQ +E ++L
Sbjct: 137 AHL-GTQNFPRLRIGIGRPQGNNTKEDASTISYVLGRFSSDQTPLVAEVLQMALEAVELS 195
Query: 192 LSKGLTESARHFN 204
L +G+ ++ +N
Sbjct: 196 LKQGVAQAMNRYN 208
>gi|317490360|ref|ZP_07948844.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325833603|ref|ZP_08166052.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
gi|316910495|gb|EFV32120.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325485527|gb|EGC87996.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
Length = 185
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG++Y+ TRHN GF+ +D AE G C A +G D ++LAKP
Sbjct: 3 LIVGLGNPGEEYEHTRHN-AGFDAVDLIAEEVGARYWKTECGALTTKGVYRDHDLVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
Q+YMN SG L Y + ++V HD++ + G +R++ GGH GHNGL+S+ +
Sbjct: 62 QSYMNTSGGPVKQLMNAYGVDAEHLIVVHDELDIDPGTVRVKFGGGHAGHNGLRSICDKL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G R++ R+R+GIGRPPG+M ++L K A + A G + L+ GL ++
Sbjct: 122 -GTRDWHRVRVGIGRPPGRMPVVDWVLSKPKKDAADDFAQATDRGAQAALSLVQVGLEKT 180
Query: 200 ARHFN 204
+ FN
Sbjct: 181 QQAFN 185
>gi|254491100|ref|ZP_05104281.1| peptidyl-tRNA hydrolase [Methylophaga thiooxidans DMS010]
gi|224463613|gb|EEF79881.1| peptidyl-tRNA hydrolase [Methylophaga thiooxydans DMS010]
Length = 190
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 111/184 (60%), Gaps = 7/184 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM---NTVHCKATFGQGFVGDAPVL 75
W+ GLGNPG +Y+GTRHN VGF ++D A G + N H + Q + + V
Sbjct: 4 WIIAGLGNPGSQYEGTRHN-VGFWLLDQLARELGANFTVQNRYHGQLV--QCSLDEHKVY 60
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP T+MN SG+S LA +YK+PL +LV HD++ L GV+RL+ +GGHGGHNGL+ +
Sbjct: 61 LLKPLTFMNRSGQSVAALANFYKIPLQNILVVHDELDLEPGVVRLKRDGGHGGHNGLRDI 120
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ G + F R R+GIG P ++L K + R++++TA+ +++L +LS
Sbjct: 121 IAQ-TGGKNFLRCRLGIGHPGHSKLVSDYVLSKPSPTDRQQVETAIDNVLQILPDVLSDK 179
Query: 196 LTES 199
L ++
Sbjct: 180 LDKA 183
>gi|15896464|ref|NP_349813.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum ATCC 824]
gi|337738423|ref|YP_004637870.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum DSM 1731]
gi|384459933|ref|YP_005672353.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum EA 2018]
gi|21263854|sp|Q97E97.1|PTH_CLOAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15026289|gb|AAK81153.1|AE007817_7 Stage V sporulation protein C, peptidyl-tRNA hydrolase [Clostridium
acetobutylicum ATCC 824]
gi|325510622|gb|ADZ22258.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum EA 2018]
gi|336291901|gb|AEI33035.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum DSM 1731]
Length = 187
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 113/189 (59%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG KY+ TRHN +GF+ I+ A IS++ K +G+G + V+L K
Sbjct: 2 FLIVGLGNPGLKYEHTRHN-MGFDAIENIAAKHNISIDKKGFKGLYGKGIIDGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A YYK+ ++V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 PYTYMNLSGESVVEAANYYKINKENIVVIYDDISLDVGKIRIRTKGSAGGHNGIKNIVLH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ EF R+++G+G P + ++L KF+ R++I+ L E ++ ++ G+
Sbjct: 121 LS-SEEFPRVKVGVGEPTENL--VNYVLGKFSQDERKKIEEVLNIVTEAVECMVVDGVQN 177
Query: 199 SARHFNTIQ 207
+ FN ++
Sbjct: 178 AMNKFNGLK 186
>gi|333896009|ref|YP_004469883.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111274|gb|AEF16211.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 190
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG +Y+ TRHN VGFE+ID+ ++ I++N + K+ G+G ++L K
Sbjct: 2 YIVVGLGNPGKEYEKTRHN-VGFEVIDSLSKKLDIAVNKIKFKSLIGEGIYKGEKIVLQK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE+ + +YKLPL+ ++V +DD L G +R+R G GGHNG+KS++
Sbjct: 61 PQTFMNSSGEAVYDIVDFYKLPLSNLIVVYDDKDLDVGKIRVRKKGSAGGHNGMKSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +F R+R+GIG+P G M +L KF + + ++ + ++ G+
Sbjct: 120 ILNSEDFPRVRLGIGKPKGDM--IQHVLGKFEGRDMDIVANSIDNAANAVLDIIENGVEH 177
Query: 199 SARHFN 204
+ +N
Sbjct: 178 AMNLYN 183
>gi|443626834|ref|ZP_21111244.1| putative Peptidyl-tRNA hydrolase [Streptomyces viridochromogenes
Tue57]
gi|443339688|gb|ELS53920.1| putative Peptidyl-tRNA hydrolase [Streptomyces viridochromogenes
Tue57]
Length = 200
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
T + PWL GLGNPG Y RHN VGF ++D AE G +A +G +G
Sbjct: 4 TTDPSAPWLIAGLGNPGPDYARNRHN-VGFMVVDLLAERIGGRFKRAGKAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
+ V+LAKP +YMNLSG G L +YK+P+ ++ HD++ + G LRL+ GG
Sbjct: 63 PPGPLNRRVILAKPMSYMNLSGGPVGALRDFYKVPVGNIVAVHDELDIDFGTLRLKLGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 123 DNGHNGLKSMTKAM--GSDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 181 DAVECLVIEGLERAQSTYNS 200
>gi|300871524|ref|YP_003786397.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|404476577|ref|YP_006708008.1| peptidyl tRNA hydrolase [Brachyspira pilosicoli B2904]
gi|434381585|ref|YP_006703368.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli WesB]
gi|300689225|gb|ADK31896.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|404430234|emb|CCG56280.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli WesB]
gi|404438066|gb|AFR71260.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli B2904]
Length = 198
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG++YK RHN +GF +ID A++ + + K+ F + + + +L KP
Sbjct: 4 LVIGLGNPGEEYKNHRHN-IGFIIIDKLAQNLSLKFDNNKKKSLFTRAKLNNTDFILLKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES ++ ++ + ++V +DDM +P G +++ G GGHNG+KS++
Sbjct: 63 QTFMNLSGESAIYISKFFNIKPEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQL 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV-EVLKLLLSKGLTE 198
+ + +F RLR+GIGRP ++L F+ RE ID L E V E +K +L + T
Sbjct: 123 QTD-DFIRLRVGIGRPSFGKKVNDYVLSSFSKSERENIDNDLGENVIEAIKTILFESYTI 181
Query: 199 SARHFN 204
+ +N
Sbjct: 182 AQNKYN 187
>gi|429219948|ref|YP_007181592.1| peptidyl-tRNA hydrolase [Deinococcus peraridilitoris DSM 19664]
gi|429130811|gb|AFZ67826.1| peptidyl-tRNA hydrolase [Deinococcus peraridilitoris DSM 19664]
Length = 214
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN VG+ ++D A QG A + +G VLL KP
Sbjct: 3 LIVGLGNPGAQYAATRHN-VGWLVVDELAR-QGEQTWRKDRDAEVCEVRLGAQKVLLVKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG + PL +YKL L+ +LV DD+ P G+L++R G GG NGLK ++
Sbjct: 61 QTFMNTSGRAVVPLVRFYKLALSDLLVVQDDLDSPFGLLKVRLGGRSGGQNGLKDIIRGL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ +FARL+IGI RPP D ++L K+ A + T + G + GL E+
Sbjct: 121 -GSEDFARLKIGISRPPPGWDVSGWVLSKWRAEEEATLRTLIDLGTRAAAIWAESGLLEA 179
Query: 200 ARHFN 204
R FN
Sbjct: 180 QRAFN 184
>gi|323340105|ref|ZP_08080370.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|417974648|ref|ZP_12615455.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|323092482|gb|EFZ35089.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|346328992|gb|EGX97304.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
Length = 187
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGN G +Y TRHN GF ID FAE N A G + V+LAKP
Sbjct: 3 LIVGLGNIGKEYDETRHN-AGFMTIDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG S + +YKL VL+ HDDM L G LRLR G GGHNG+KS++ +
Sbjct: 62 TTYMNESGRSVRQIVDFYKLNPEDVLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F RLRIGI P Q ++L +F++ R D + E V+ + L
Sbjct: 122 -GTEKFKRLRIGIDHPAKQK-VVDWVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|119508860|ref|ZP_01628012.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
gi|119466389|gb|EAW47274.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
Length = 209
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 6/192 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVL 75
P L VGLGNP KY TRHN +GF IDA + S I + + +G+G G +
Sbjct: 13 PQLIVGLGNPEPKYDQTRHN-IGFAAIDALSRSWHIPLGENRKFQGEYGEGIAPGSRKIR 71
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG+S + ++YKLP VLV +DDM LP G RLR +G GGHNG+KS
Sbjct: 72 LLKPLTYMNRSGQSIQAVTSWYKLPPESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKST 131
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAF--LLQKFNAIARERIDTALQEGVEVLKLLLS 193
+++ + F RLRIGIG+P + ++ +L KF+A + I LQ VE ++L L
Sbjct: 132 ISHL-NTQNFPRLRIGIGKPNDSDNSESISHVLGKFSAAETQLISVLLQFVVECVELSLK 190
Query: 194 KGLTESARHFNT 205
+G+ ++ N+
Sbjct: 191 QGVEKAMNRCNS 202
>gi|452956509|gb|EME61900.1| peptidyl-tRNA hydrolase [Rhodococcus ruber BKS 20-38]
Length = 190
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 109/181 (60%), Gaps = 3/181 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG +Y+ TRHN +GF + D A G + A Q + V++AK
Sbjct: 7 LVVGLGNPGPQYEKTRHN-IGFMVADTLAARVGGKFSAHKRSNAEIVQARLDGRQVIIAK 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+TYMNLSG LA ++ + ++V HD++ L G +RL+ GG GHNGL+S+ +
Sbjct: 66 PRTYMNLSGGPVAGLARFFSVEPADIVVVHDELDLDFGTVRLKLGGGENGHNGLRSISSA 125
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + + R R+GIGRPPG+MDP ++L+ F++ R+ +D ++ + ++LLL GL E
Sbjct: 126 L-GTKLYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLIREQAADAVELLLRVGLEE 184
Query: 199 S 199
+
Sbjct: 185 A 185
>gi|256374802|ref|YP_003098462.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
gi|255919105|gb|ACU34616.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
Length = 189
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGN G KY+GTRHN GF ++D A+ G A +G + V+LAKP
Sbjct: 7 LVVGLGNSGPKYEGTRHN-AGFLVLDELADRVGGRFKAHKGGAEVVEGRLAGQRVVLAKP 65
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+ YMN SG A +YK V+V HD++ LP G +RL+ GG GHNGL+S+ +
Sbjct: 66 RGYMNNSGGPVSGTAKFYKAQPASVIVVHDELDLPFGAVRLKLGGGDNGHNGLRSITRSL 125
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +++ R+R G+ RPPG+MDP ++L+ F+ + R+++ L + ++ L+S GL +
Sbjct: 126 -GTKDYLRVRFGVDRPPGRMDPADYVLKDFSVVERKQLALELDRAADAVEALVSSGLEAA 184
Query: 200 ARHFN 204
F+
Sbjct: 185 QNQFH 189
>gi|160944869|ref|ZP_02092096.1| hypothetical protein FAEPRAM212_02385 [Faecalibacterium prausnitzii
M21/2]
gi|158444053|gb|EDP21057.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii M21/2]
Length = 206
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL GLGNP KY GTRHN GF +DA A+ IS+ + +GQG V V+L K
Sbjct: 21 WLIAGLGNPEAKYDGTRHN-AGFAALDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLK 79
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S P+A ++K+P + VLV DD+ G LR+R +G GGHNGLKS++
Sbjct: 80 PLTYMNLSGDSIAPMAGFFKIPADHVLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIAR 139
Query: 139 FRGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G F R+RIGIG +P D A++L KF + I + KL++ L
Sbjct: 140 L-GGENFPRIRIGIGAKPHPDYDLAAWVLGKFPPEDAKAIADRYADLEAAAKLIMDGKLG 198
Query: 198 ESARHFN 204
+ +N
Sbjct: 199 LAQSKYN 205
>gi|452958433|gb|EME63786.1| peptidyl-tRNA hydrolase [Amycolatopsis decaplanina DSM 44594]
Length = 198
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y G RHN VGF ++D A G A +G + V+LAKP
Sbjct: 14 LLVGLGNPGPQYAGNRHN-VGFMVLDELAGRVGGKFKAHKSGAEILEGRLAGQRVVLAKP 72
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
++YMNLSG A +YK+P V+V HD++ + G L+++ GG GHNGL+S+ +
Sbjct: 73 RSYMNLSGGPVVGAARFYKIPPAGVVVVHDELDVDFGALKMKLGGGDNGHNGLRSITKSL 132
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +++ R+R G+GRPPG+ DP F+L+ F+ + R+ + + + ++ L+S GL +
Sbjct: 133 -GTKDYYRVRFGVGRPPGRQDPADFVLKDFSTVERKELAFEIDRCADAVEALISTGLAAA 191
Query: 200 ARHFNT 205
F+
Sbjct: 192 QNTFHA 197
>gi|428310537|ref|YP_007121514.1| peptidyl-tRNA hydrolase [Microcoleus sp. PCC 7113]
gi|428252149|gb|AFZ18108.1| peptidyl-tRNA hydrolase [Microcoleus sp. PCC 7113]
Length = 206
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 6/196 (3%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT---VHCKATFGQGF 68
+++ P L VGLGNP KY+ TRHN +GFE +DA A++ IS + GQG
Sbjct: 7 TSSLVIPQLIVGLGNPESKYEKTRHN-IGFEAVDALAKTWQISWSENRRFQALIGEGQGA 65
Query: 69 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 128
GD V L KP TYMN SG++ +YKLP L+ +DDM L G LRLR +G GG
Sbjct: 66 NGD-KVRLLKPLTYMNRSGQAIRSATDWYKLPPESTLIIYDDMDLSVGRLRLRLSGSAGG 124
Query: 129 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
HNG+KS + + G + F RLRIGIG+ D + +L KF+ + + LQ V+ +
Sbjct: 125 HNGMKSAIAHL-GTQNFPRLRIGIGKSRADKDSVSHVLGKFSPEETQIMSEVLQLVVDAV 183
Query: 189 KLLLSKGLTESARHFN 204
+L L +G+ ++ +N
Sbjct: 184 ELALKQGVEKAMSLYN 199
>gi|346307074|ref|ZP_08849219.1| peptidyl-tRNA hydrolase [Dorea formicigenerans 4_6_53AFAA]
gi|345907020|gb|EGX76738.1| peptidyl-tRNA hydrolase [Dorea formicigenerans 4_6_53AFAA]
Length = 194
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNP +Y+GTRHN VGF++ID AE I+++ +A G+G + VLL KP
Sbjct: 3 IIAGLGNPTKEYEGTRHN-VGFQVIDKIAEKYNIAVDAKKGRAYVGKGIIEGQKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
QTYMNLSGES L Y+K+ P +LV +DD+ L G +R+R G GGHNG+K+++
Sbjct: 62 QTYMNLSGESIRELVDYFKVDPKEELLVIYDDISLNPGQIRIRKKGSAGGHNGIKNIIAQ 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R+++G+G P D A++L F+ E ++ ++ + + +L +
Sbjct: 122 L-GTDTFQRIKVGVGEKPKGYDLAAYVLGHFHGEDLELMEEGYEKAISATEEILKGEIDA 180
Query: 199 SARHFN 204
+ +N
Sbjct: 181 AMNEYN 186
>gi|294813077|ref|ZP_06771720.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|294325676|gb|EFG07319.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 212
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG-----D 71
PWL VGLGNPG Y RHN VGF + D AE G + +A +G +G
Sbjct: 22 PWLIVGLGNPGPGYAANRHN-VGFMVADLLAERVGGAFKRAPKAQAQVVEGRIGPPGPAS 80
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP ++MNLSG L +YK+P R++ HD++ + G LRL+ GG GHNG
Sbjct: 81 RRVVLAKPMSFMNLSGGPVVALRDFYKVPTERIVAIHDELDIDYGTLRLKLGGGDNGHNG 140
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ RLR GIGRPPG+M F+L+ F+ R+ +D + + ++ L
Sbjct: 141 LKSMTKAM--GPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEAL 198
Query: 192 LSKGLTESARHFNT 205
+++GL + +N+
Sbjct: 199 VTEGLERAQSAYNS 212
>gi|295104238|emb|CBL01782.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii SL3/3]
Length = 192
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL GLGNP KY GTRHN GF +DA A+ IS+ + +GQG V V+L K
Sbjct: 7 WLIAGLGNPEAKYDGTRHN-AGFAALDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLK 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S P+A ++K+P + VLV DD+ G LR+R +G GGHNGLKS++
Sbjct: 66 PLTYMNLSGDSIAPMAGFFKIPADHVLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIAR 125
Query: 139 FRGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G F R+RIGIG +P D A++L KF + I + KL++ L
Sbjct: 126 L-GGENFPRIRIGIGAKPHPDYDLAAWVLGKFPPEDAKAIADRYADLEAAAKLIMDGKLG 184
Query: 198 ESARHFN 204
+ +N
Sbjct: 185 LAQSKYN 191
>gi|395772729|ref|ZP_10453244.1| peptidyl-tRNA hydrolase [Streptomyces acidiscabies 84-104]
Length = 199
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 114/195 (58%), Gaps = 11/195 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAP--- 73
PWL VGLGNPG +Y RHN +GF + D AE G +A +G +G AP
Sbjct: 9 PWLIVGLGNPGPEYAMNRHN-IGFMVADLLAERMGGRFKRAGKAQAQVLEGRLG-APGPA 66
Query: 74 ---VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
+LAKP ++MNLSG L +YK+PL+ ++ HD++ + G LRL+ GG GHN
Sbjct: 67 SRRAVLAKPMSFMNLSGGPVNALRDFYKVPLSNIVAIHDELDIDYGTLRLKLGGGDNGHN 126
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GLKS+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++
Sbjct: 127 GLKSMTKSM--GPDYHRIRCGIGRPPGRMQVADFVLKDFSSTERKELDWFVDRAADAVEA 184
Query: 191 LLSKGLTESARHFNT 205
L+++GL + + +N+
Sbjct: 185 LVTEGLERAQQSYNS 199
>gi|302519767|ref|ZP_07272109.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
gi|302428662|gb|EFL00478.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
Length = 267
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH------CKATFGQGFVGD 71
PWL GLGNPG +Y G RHN VGF + D A G + G V
Sbjct: 12 PWLVAGLGNPGPEYAGNRHN-VGFVVADLLAARLGGRFKRAARARAQVVEGRLGVPGVSS 70
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNG
Sbjct: 71 TRVVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNG 130
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ + R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L
Sbjct: 131 LKSMTKAM--GPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEAL 188
Query: 192 LSKGLTESARHFNT 205
+++GL + FN+
Sbjct: 189 VTQGLERAQGSFNS 202
>gi|333026423|ref|ZP_08454487.1| putative peptidyl-tRNA hydrolase [Streptomyces sp. Tu6071]
gi|332746275|gb|EGJ76716.1| putative peptidyl-tRNA hydrolase [Streptomyces sp. Tu6071]
Length = 202
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVG-----D 71
PWL GLGNPG +Y G RHN VGF + D A G +A +G +G
Sbjct: 12 PWLVAGLGNPGPEYAGNRHN-VGFMVADLLAARLGGRFKRAARAQAQVVEGRLGVPGVSS 70
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNG
Sbjct: 71 TRVVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNG 130
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ + R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L
Sbjct: 131 LKSMTKAM--GPAYHRVRFGIGRPPGRMQVADFVLKDFSSGERKELDYFVDRAADAVEAL 188
Query: 192 LSKGLTESARHFNT 205
+++GL + +N+
Sbjct: 189 VTQGLERAQGSYNS 202
>gi|399923900|ref|ZP_10781258.1| peptidyl-tRNA hydrolase [Peptoniphilus rhinitidis 1-13]
Length = 189
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG +Y+ TRHN +GF+ IDA A+ I +N + K G+G + V+L K
Sbjct: 2 YIIVGLGNPGKRYEDTRHN-IGFKTIDALADKLNIKVNKIKFKGLVGEGRIAGEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SGES + +YKL +LV DD+ + L+++ NG G HNGLKS++ N
Sbjct: 61 PHTFMNNSGESVVEILNFYKLKPENLLVVVDDIDIEFAQLKIKKNGSAGTHNGLKSIV-N 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+++FAR +IG+G+ D +F+L F + ++ I+ A+ E + ++ G+
Sbjct: 120 LIGSKDFARFKIGVGKKHPNEDLASFVLSNFPSRDKKHIEDAVDACSESIIKTVTDGIDV 179
Query: 199 SARHFNT 205
+ +N
Sbjct: 180 AMNFYNN 186
>gi|390933856|ref|YP_006391361.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569357|gb|AFK85762.1| Peptidyl-tRNA hydrolase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 190
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 112/186 (60%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG +Y+ TRHN VGFE+ID+ ++ I++ + K+ G+G ++L K
Sbjct: 2 YIVVGLGNPGKEYEKTRHN-VGFEVIDSLSKKLDIAVKKIKFKSLIGEGLYKGEKIVLQK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE+ + +YKLPL+ ++V +DD L G +R+R G GGHNG+KS++
Sbjct: 61 PQTFMNSSGEAVYDIVDFYKLPLSNLIVVYDDKDLDVGKIRVRKKGSAGGHNGMKSII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +F R+R+GIG+P G M +L +F + ++ ++ + + ++ G+
Sbjct: 120 ILNSEDFLRVRLGIGKPKGDM--IEHVLGRFEESDMDIVENSIDNAAKAVLDIIENGVEH 177
Query: 199 SARHFN 204
+ +N
Sbjct: 178 AMNLYN 183
>gi|379745757|ref|YP_005336578.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
gi|379753049|ref|YP_005341721.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-02]
gi|379760484|ref|YP_005346881.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-64]
gi|387874437|ref|YP_006304741.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MOTT36Y]
gi|406029370|ref|YP_006728261.1| peptidyl-tRNA hydrolase [Mycobacterium indicus pranii MTCC 9506]
gi|443304369|ref|ZP_21034157.1| peptidyl-tRNA hydrolase [Mycobacterium sp. H4Y]
gi|378798121|gb|AFC42257.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
gi|378803265|gb|AFC47400.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-02]
gi|378808426|gb|AFC52560.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare MOTT-64]
gi|386787895|gb|AFJ34014.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MOTT36Y]
gi|405127917|gb|AFS13172.1| peptidyl-tRNA hydrolase [Mycobacterium indicus pranii MTCC 9506]
gi|442765933|gb|ELR83927.1| peptidyl-tRNA hydrolase [Mycobacterium sp. H4Y]
Length = 191
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPGD Y TRHN VGF + D A G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHN-VGFMVADLLAARMG-SKFKAHKRSGAEIVSGRLVGH 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL
Sbjct: 59 SVVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+S+ N G+++F R+RIGIGRPPG+ DP AF+L+ FNA R + T ++ + +LL+
Sbjct: 119 RSLANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFNAAERTEVPTICEQAADATELLI 177
Query: 193 SKGL 196
GL
Sbjct: 178 ELGL 181
>gi|332654762|ref|ZP_08420504.1| aminoacyl-tRNA hydrolase [Ruminococcaceae bacterium D16]
gi|332516105|gb|EGJ45713.1| aminoacyl-tRNA hydrolase [Ruminococcaceae bacterium D16]
Length = 197
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ V LGNPGD+Y+ TRHN VGF + D E + + + KA + VL+ K
Sbjct: 12 WMLVCLGNPGDQYENTRHN-VGFMVADQLGERYRLPIQKLKFKALTNVFTISGEKVLVMK 70
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ P A +YK+P ++V DD L G LR+R +G GGHNGLKS++ +
Sbjct: 71 PVTYMNLSGEAVRPAADFYKIPPEHIIVISDDTALDVGKLRIRKSGSAGGHNGLKSIIQH 130
Query: 139 FRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F R+R+G+G+ P D ++L KF R+ I A++ + ++ + +G
Sbjct: 131 L-GTDQFPRIRVGVGKKPHPDYDLADWVLGKFQGEDRKAIAAAVERCADAVECYIKEGPD 189
Query: 198 ESARHFN 204
+ FN
Sbjct: 190 RAMNKFN 196
>gi|158321664|ref|YP_001514171.1| peptidyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
gi|167011988|sp|A8MK43.1|PTH_ALKOO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158141863|gb|ABW20175.1| Aminoacyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
Length = 185
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 111/188 (59%), Gaps = 9/188 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY TRHN +GFE ID A+ I + + KA G+G +G VLL KP
Sbjct: 3 IIVGLGNPGKKYDATRHN-IGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG+S + +YK+ ++V +DD+ +P G LR+R G G HNG+KS++
Sbjct: 62 QTFMNLSGQSLLDIVQFYKVDPKNIVVLYDDIDIPVGTLRIREKGSSGTHNGMKSIIYLL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDT---ALQEGVEVLKLLLSKGL 196
+ + +F R+RIG+G+P D ++L +F +E I T L+ + ++ L+ G+
Sbjct: 122 QTD-QFPRIRIGVGKPQFG-DLADYVLGRF---PKEEIPTMLETLERASQAVETLVKDGI 176
Query: 197 TESARHFN 204
S +N
Sbjct: 177 AVSMNRYN 184
>gi|421770634|ref|ZP_16207325.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP2]
gi|421772806|ref|ZP_16209459.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP3]
gi|411181740|gb|EKS48903.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP2]
gi|411183220|gb|EKS50360.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus LRHMDP3]
Length = 185
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y GT+HN +GF ++D A+ G+++N + A V D V L KP
Sbjct: 3 MIVGLGNPGRQYAGTKHN-MGFMVVDGLAQRMGLTLNKLEFDAATATTCVDDEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 62 QTYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+ EF RL+IGI P Q ++L F + ID AL + + L+ L+
Sbjct: 121 TGSDEFYRLKIGIQHPQRQR-VVDWVLTPFAKTDQPVIDAALTKADDALEDWLN 173
>gi|335998475|ref|ZP_08564386.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis SPM0211]
gi|335348330|gb|EGM49836.1| peptidyl-tRNA hydrolase [Lactobacillus ruminis SPM0211]
Length = 187
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGN G +Y TRHN GF +D FAE N A G + V+LAKP
Sbjct: 3 LIVGLGNIGREYDETRHN-AGFMTVDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG S + +YKL VL+ HDDM L G LRLR G GGHNG+KS++ +
Sbjct: 62 TTYMNESGRSVRQIVDFYKLDPEDVLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F RLRIGI P Q ++L +F++ R D + E V+ + L
Sbjct: 122 -GTEKFKRLRIGIDHPAKQK-VVDWVLTRFSSDQRTEFDVGMNEAVDAIDDWLE 173
>gi|317057761|ref|YP_004106228.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
gi|315450030|gb|ADU23594.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
Length = 208
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA 72
T ++ VGLGNPG +Y+GTRHN GF I+A + G S + KA G +G
Sbjct: 17 TGTKPEYIIVGLGNPGIQYEGTRHN-AGFITIEALEKKLGFSCDRHKFKAKVGNTVIGGK 75
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
L+ KP+T+MNLSG++ +YK+PL V+V DD+ L G +R+R G GGHNG+
Sbjct: 76 SCLVMKPETFMNLSGDAVSEAMDFYKIPLENVIVIFDDISLDVGHMRIRRKGSAGGHNGI 135
Query: 133 KSVMNNFRGNREFARLRIGIGRPPG-QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
KS++ G +F R+++G+G+ P D ++L KF E++ A + + L+L+
Sbjct: 136 KSIIAQC-GGEDFPRIKLGVGKKPNPAYDLAKWVLSKFGDEDMEKLGNAADKACDALELM 194
Query: 192 LSKGLTESARHFNT 205
+ + E+ +N
Sbjct: 195 VQGKIDEAMNKYNA 208
>gi|218290673|ref|ZP_03494764.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
gi|218239338|gb|EED06536.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
Length = 191
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ TRHN GF ID AE ++ A G VLL KP
Sbjct: 3 VIVGLGNPGREYERTRHN-AGFMAIDILAEKLAARVDQADFHALVGDARYAGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
TYMN+SG S G + YY++ P ++V +DDM P GV+RL+ G GGHNG+KS++ +
Sbjct: 62 HTYMNVSGLSVGEIVRYYRIDPAEDLMVLYDDMDFPPGVVRLKVQGSAGGHNGIKSIIES 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R+RIGIGRPP ++L F+ R+ L+ E + +G E
Sbjct: 122 L-GTEKFGRVRIGIGRPPKGAPIVPYVLGAFSREEEPRVRRGLETAAEAALYAVERGFAE 180
Query: 199 SARHFNTIQK 208
+ +N +
Sbjct: 181 AMTRYNAAAR 190
>gi|374321392|ref|YP_005074521.1| peptidyl-tRNA hydrolase [Paenibacillus terrae HPL-003]
gi|357200401|gb|AET58298.1| peptidyl-tRNA hydrolase [Paenibacillus terrae HPL-003]
Length = 186
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG +Y+ TRHN VGF +DA A I +N CKA G+G +G +L K
Sbjct: 3 WI-VGLGNPGPQYEKTRHN-VGFMALDALAARHNIQINQSKCKALIGEGHIGGMKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES YYK ++ ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGESLRAYMDYYKADIDDLVVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F +E + +++ + L+ L
Sbjct: 121 -TGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEKELLAGMIEDTCDALEYSLGHPFER 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAEFN 185
>gi|313112803|ref|ZP_07798450.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624873|gb|EFQ08181.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 192
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL GLGNP KY GTRHN G+ +D A+ GIS++ + +GQG V V+L K
Sbjct: 7 WLIAGLGNPETKYDGTRHN-AGYAALDYLADKWGISVSKTKFEGLWGQGEVDGHKVVLLK 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S P A ++K+P + V+V DD+ G LR+R +G GGHNGLKS++
Sbjct: 66 PLTYMNLSGDSIAPTAGFFKIPADHVIVLCDDITQSPGKLRIRPSGSAGGHNGLKSIIAR 125
Query: 139 FRGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G F R+RIG+G +P D A++L KF A + + + KL++ L+
Sbjct: 126 L-GGENFPRIRIGVGAKPHPDYDLAAWVLGKFPAEDAKALSGRYPDLEAAAKLIMDGKLS 184
Query: 198 ESARHFN 204
+ +N
Sbjct: 185 LAQSKYN 191
>gi|16331675|ref|NP_442403.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|383323417|ref|YP_005384271.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326586|ref|YP_005387440.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492470|ref|YP_005410147.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437738|ref|YP_005652463.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|451815827|ref|YP_007452279.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|2499989|sp|Q59989.1|PTH_SYNY3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1001232|dbj|BAA10473.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|339274771|dbj|BAK51258.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|359272737|dbj|BAL30256.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275907|dbj|BAL33425.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279077|dbj|BAL36594.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960691|dbj|BAM53931.1| peptidyl-tRNA hydrolase [Bacillus subtilis BEST7613]
gi|451781796|gb|AGF52765.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
Length = 194
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 108/188 (57%), Gaps = 3/188 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLL 76
P L VGLGNP KY TRHN +GF ++DA A + S + + FG+G + L
Sbjct: 3 PKLIVGLGNPEPKYDQTRHN-IGFAVVDALAITWQCSWYDHKRFQGWFGEGLMAGQKTCL 61
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP+TYMN SG++ + +YKL VLV +DDM LP G LRLR G GGHNG+KS++
Sbjct: 62 LKPRTYMNRSGQAVRAVVDWYKLDPQSVLVVYDDMDLPLGRLRLRQTGSAGGHNGMKSLI 121
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
++ G ++F RLR+GIG+ G D A +L KF+ ++ +L E + L G+
Sbjct: 122 SHL-GTQDFPRLRLGIGKSDGSKDTIAHVLGKFSPSELPIVEKSLDLATEAIAHSLHHGI 180
Query: 197 TESARHFN 204
++ FN
Sbjct: 181 AKTMSLFN 188
>gi|308066874|ref|YP_003868479.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa E681]
gi|305856153|gb|ADM67941.1| Peptidyl-tRNA hydrolase (PTH) [Paenibacillus polymyxa E681]
Length = 186
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG +Y+ TRHN VGF +DA A I +N CKA G+G +G +L K
Sbjct: 3 WI-VGLGNPGPQYEKTRHN-VGFMALDALASRHNIQINQSKCKALIGEGHIGGVKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES YYK + ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGESLRAYMDYYKADMEDLVVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F ++ + +++ L+ LS
Sbjct: 121 -TGTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKDLLAGMIEDTCNALEYSLSHPFER 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAEFN 185
>gi|159902816|ref|YP_001550160.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
gi|159887992|gb|ABX08206.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
Length = 206
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 114/203 (56%), Gaps = 12/203 (5%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGF---V 69
+ A P L VGLGNPG KY TRHN VGF +++ A + S +T K FGQ +
Sbjct: 2 STSADPSLLVGLGNPGSKYSSTRHN-VGFMVLEKLATKECASFST--SKKLFGQLAEIGI 58
Query: 70 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
G L P TYMN SG + ++ L N +L+ DD+ LP G LRLR+ GG GGH
Sbjct: 59 GAQKRRLLMPDTYMNESGRAVKAAMHWFGLQPNHILIIVDDIDLPLGKLRLRYQGGAGGH 118
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRP-----PGQMDPKAFLLQKFNAIARERIDTALQEG 184
NGLKS++NN G + F+RLR+GIG+P Q+ + +L FN+ + + + L E
Sbjct: 119 NGLKSIINNL-GTQNFSRLRVGIGKPVIAFEEKQVRTVSHVLGAFNSKEQLVMQSVLNEV 177
Query: 185 VEVLKLLLSKGLTESARHFNTIQ 207
V L L+ GL ++A H N++
Sbjct: 178 VLGLNLIQEVGLEKAANHLNSMH 200
>gi|254388784|ref|ZP_05004016.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|326441621|ref|ZP_08216355.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197702503|gb|EDY48315.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 199
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAP--- 73
PWL VGLGNPG Y RHN VGF + D AE G + +A +G +G
Sbjct: 9 PWLIVGLGNPGPGYAANRHN-VGFMVADLLAERVGGAFKRAPKAQAQVVEGRIGPPGPAS 67
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP ++MNLSG L +YK+P R++ HD++ + G LRL+ GG GHNG
Sbjct: 68 RRVVLAKPMSFMNLSGGPVVALRDFYKVPTERIVAIHDELDIDYGTLRLKLGGGDNGHNG 127
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ RLR GIGRPPG+M F+L+ F+ R+ +D + + ++ L
Sbjct: 128 LKSMTKAM--GPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEAL 185
Query: 192 LSKGLTESARHFNT 205
+++GL + +N+
Sbjct: 186 VTEGLERAQSAYNS 199
>gi|328956570|ref|YP_004373956.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
gi|328672894|gb|AEB28940.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
Length = 191
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D FA + + +A + + FVG VLL KP
Sbjct: 3 MIVGLGNPGTKYKNTKHN-IGFITVDEFAIQHKMEFSKTKFEALYAEAFVGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG + L Y+ + + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 QTFMNDSGRAVRQLMDYFNVEVEDLVVIYDDLDLPVGKLRLRQKGSAGGHNGIKSIIQHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
+F R+RIGI RP G+ +L F+ E + +++ V L +
Sbjct: 122 -DTSDFNRIRIGIDRPMGKQTVIQHVLSGFHKSQHEELLITIKDSVAALDYWIE 174
>gi|255325404|ref|ZP_05366508.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
gi|255297490|gb|EET76803.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
Length = 197
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVL 75
P L VGLGNPG KY GTRHN +GF++ D A + +S +VH K +G G ++
Sbjct: 24 PLLVVGLGNPGPKYAGTRHN-IGFDVADELA-GELMSGFSVHKKTNTEVAEGMAGGRKII 81
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
AKP+++MNLSG LA Y+ L ++V HD++ L G ++LR GG GHNGL+S
Sbjct: 82 CAKPRSFMNLSGGPIKALAQYFHLSAADIIVVHDELELDFGTIKLRQGGGDHGHNGLRST 141
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
+ G +++ RL +GIGRPPG+MDP +F+L+ + + I + VE
Sbjct: 142 TKSL-GTKDYQRLSVGIGRPPGRMDPASFVLKPWAKQEKAEIPILCADAVE 191
>gi|186684439|ref|YP_001867635.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
gi|238689436|sp|B2JA15.1|PTH_NOSP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186466891|gb|ACC82692.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
Length = 213
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 115/199 (57%), Gaps = 9/199 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GD 71
A+ P L VGLGNP KY TRHN +GF ++A + S IS+ + +G+G G
Sbjct: 9 ALVIPQLIVGLGNPESKYDQTRHN-IGFAAVEALSRSWRISLAENRKFQGEYGEGMAPGG 67
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KP TYMN SG+S + ++YKLP VL+ +DDM LP G RLR +G GGHNG
Sbjct: 68 GKIRLLKPLTYMNRSGQSIQAVTSWYKLPPESVLIIYDDMDLPLGKTRLRLSGSAGGHNG 127
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVE 186
+KS + + + F RLRIGIG+P G D + +L +F++ +++ LQ VE
Sbjct: 128 MKSAIAHL-STQNFPRLRIGIGKPKGAADNDDSNTVSHVLGRFSSAENQQMSLVLQFVVE 186
Query: 187 VLKLLLSKGLTESARHFNT 205
++L L +G+ ++ N+
Sbjct: 187 CIELSLKQGVEKAMNVCNS 205
>gi|260893904|ref|YP_003240001.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
gi|260866045|gb|ACX53151.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
Length = 195
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAKP 79
VGLGNPG Y TRHN +GF ++D A G+S V + + D V L KP
Sbjct: 9 VVGLGNPGPAYADTRHN-LGFMVLDRLARQVGVSFAKEVKLCSRLAVLRLEDREVYLLKP 67
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGE+ L +L +LV +DD+ LP G L+L +G GGH G+ SV+ +
Sbjct: 68 QTYMNLSGEAVKLLVEKKELFPEEILVIYDDLDLPLGRLKLALSGSSGGHRGMGSVLESL 127
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G RLR+GIGRPP +DP ++L F RE +D L+ V ++ L +G+ ++
Sbjct: 128 -GTTSVPRLRLGIGRPPAGLDPATYVLSPFAPEEREELDRVLERAVAAVECALQEGMAQA 186
Query: 200 ARHFNTIQ 207
FN Q
Sbjct: 187 MNKFNRRQ 194
>gi|357412970|ref|YP_004924706.1| peptidyl-tRNA hydrolase [Streptomyces flavogriseus ATCC 33331]
gi|320010339|gb|ADW05189.1| peptidyl-tRNA hydrolase [Streptomyces flavogriseus ATCC 33331]
Length = 197
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----D 71
PWL VGLGNPG +Y RHN VGF + D AE G +A +G +G
Sbjct: 7 PWLIVGLGNPGPEYAANRHN-VGFMVADLLAERMGGKFKRAQKAQAQVLEGRIGPPGPAS 65
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP +YMNLSG L +YK+P + V+ HD++ + G+LRL+ GG GHNG
Sbjct: 66 RRVVLAKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDIDFGMLRLKLGGGDNGHNG 125
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ L
Sbjct: 126 LKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELAYLVDRSADAVESL 183
Query: 192 LSKGLTESARHFNT 205
L++GL + +N+
Sbjct: 184 LAEGLERAQSAYNS 197
>gi|318061240|ref|ZP_07979961.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actG]
gi|318075755|ref|ZP_07983087.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actF]
Length = 202
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH------CKATFGQGFVGD 71
PWL GLGNPG +Y G RHN VGF + D A G + G V
Sbjct: 12 PWLVAGLGNPGPEYAGNRHN-VGFMVADLLAARLGGRFKRAARARAQVVEGRLGVPGVSS 70
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V++AKP +YMNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNG
Sbjct: 71 TRVVVAKPLSYMNLSGGPVTALRDFYKVPLERVVAVHDELDIDYGVLRLKLGGGDNGHNG 130
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ + R+R GIGRPPG+M F+L+ F++ R+ +D + + ++ L
Sbjct: 131 LKSMTKAM--GPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEAL 188
Query: 192 LSKGLTESARHFNT 205
+++GL + +N+
Sbjct: 189 VTQGLERAQGSYNS 202
>gi|254821213|ref|ZP_05226214.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
Length = 191
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 113/184 (61%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPGD Y TRHN VGF + D A G S H + A G +
Sbjct: 1 MAEPLLVVGLGNPGDNYARTRHN-VGFMVADLLAARMG-SKFKAHKRSGAEIVSGRLLGH 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V++AKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL
Sbjct: 59 SVVVAKPRCYMNESGRQVGPLAKFYSVTPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+S+ N G+++F R+RIGIGRPPG+ DP AF+L+ FNA R + T ++ + +LL+
Sbjct: 119 RSLANAL-GSKDFQRVRIGIGRPPGRKDPAAFVLENFNAAERTEVPTICEQAADATELLI 177
Query: 193 SKGL 196
GL
Sbjct: 178 ELGL 181
>gi|418071052|ref|ZP_12708326.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus R0011]
gi|423078395|ref|ZP_17067078.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 21052]
gi|357538546|gb|EHJ22566.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus R0011]
gi|357551252|gb|EHJ33046.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 21052]
Length = 185
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y GT+HN +GF ++D A+ G+++N + A V D V L KP
Sbjct: 3 MIVGLGNPGRQYAGTKHN-MGFMVVDGLAQRMGLTLNKLEFDAATATARVDDEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 62 QTYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+ EF RL+IGI P Q ++L F + ID A+ + + L+ L+
Sbjct: 121 TGSDEFYRLKIGIQHPQRQR-VVDWVLTPFAKTDQPVIDAAITKADDALEDWLN 173
>gi|229829773|ref|ZP_04455842.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
gi|229791762|gb|EEP27876.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
Length = 212
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 108/190 (56%), Gaps = 3/190 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG+KY+ +RHN GF+ ID A+ GI + + +A +G+G + VLL K
Sbjct: 14 YMIAGLGNPGEKYRHSRHN-AGFDTIDRLADQYGICLREMKFEALYGKGLIEGRQVLLVK 72
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P TYMN SG S +Y+L PL +LV DD+ L CGV+R+R G GGHNGLKS++
Sbjct: 73 PTTYMNDSGRSLQQFVRFYQLDPLEDMLVISDDVTLDCGVIRVRKQGSAGGHNGLKSIIA 132
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G F R+R+G+G+ P D A +L + RE + + E +++ +
Sbjct: 133 CL-GTDCFPRVRVGVGKVPTGGDMIAHVLGRIRPEERENMALGEEHAAEAAVMVMEGQIV 191
Query: 198 ESARHFNTIQ 207
E+ +N ++
Sbjct: 192 EAMNRYNGMR 201
>gi|239825632|ref|YP_002948256.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
gi|259535195|sp|C5D374.1|PTH_GEOSW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239805925|gb|ACS22990.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
Length = 186
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN GF +ID A+ IS T + V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHN-AGFMVIDELAKRWNISFQTTKFHGMMASTVIFGEKVALCKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 62 LTYMNLSGECVRPLMDYYHIDVDDVIVIYDDLDLPPGKIRLRMKGSSGGHNGIKSLIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+RIGIGRP ++L +F + + A+ + + + +
Sbjct: 122 -GTQEFKRVRIGIGRPANGQKITDYVLGRFTKEESDAVMEAILRAADACEKAVVTPFLQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|427405711|ref|ZP_18895916.1| peptidyl-tRNA hydrolase [Selenomonas sp. F0473]
gi|425708552|gb|EKU71591.1| peptidyl-tRNA hydrolase [Selenomonas sp. F0473]
Length = 209
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y T+HN VGF ++DA A G + G+ + V L KP
Sbjct: 3 IIAGLGNPGAEYAQTKHN-VGFMLVDALANRIGGLTWKEAFSSLVGETRIAGEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GP+ +YYK ++V HDDM +P G +R+R GG GGHNG+KS++ +
Sbjct: 62 QTYMNDSGTALGPMLSYYKCEPAELIVVHDDMDIPAGTVRIRRKGGSGGHNGIKSIIAHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRPP +L F+ RI A+ + ++ +++ G+ +
Sbjct: 122 -GGEDFPRVRIGIGRPPAGWTVINHVLAPFSEEDAPRIREAIAYLLPAMECIVTDGVDMA 180
Query: 200 ARHFNTIQK 208
+N +K
Sbjct: 181 MNRYNPQKK 189
>gi|300864784|ref|ZP_07109634.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
gi|300337188|emb|CBN54782.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
Length = 211
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 113/193 (58%), Gaps = 7/193 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGF-VGDAPVL 75
P L VGLGNP KY TRHN +GF +DA A S IS++ +A FG+G +
Sbjct: 13 PQLIVGLGNPEPKYNRTRHN-IGFAAVDALANSWQISLSENRKFQAEFGEGMGPQREKIR 71
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMNLSG++ +YKLP VL +DDM LP G LRLR +G GGHNG+KS
Sbjct: 72 LLKPLTYMNLSGQAIRAAIDWYKLPPESVLAVYDDMDLPVGRLRLRLSGSAGGHNGMKSA 131
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPK---AFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+ + G +F RLRIGIG+P + K + +L KF+ + +D L+ VE ++L
Sbjct: 132 IAHL-GTDKFPRLRIGIGKPQSSSNDKETISHVLGKFSLEESQLMDKVLKLVVEAVELSQ 190
Query: 193 SKGLTESARHFNT 205
+G+ ++ +N+
Sbjct: 191 KQGVEKAMSLYNS 203
>gi|335046927|ref|ZP_08539950.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 108 str.
F0425]
gi|333760713|gb|EGL38270.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 108 str.
F0425]
Length = 208
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAE---SQGISMNTVHCKATFGQGFVGDAPVL 75
WL GLGNP KY GTRHN GF +IDA E +G+ H F + +G V+
Sbjct: 21 WLIAGLGNPEKKYNGTRHN-AGFAVIDALLEMLGGKGLESTKFH--GAFTKLRIGTEEVV 77
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ KP TYMNLSG+S P+A +YK+P +VLV D++ L G +R+R G GGHNGLKS+
Sbjct: 78 ILKPLTYMNLSGDSIAPMANFYKIPAEQVLVVSDEISLSPGSIRIRKKGSAGGHNGLKSI 137
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ G +F R+R+G+G + D A +L F +R++ A + + +++G
Sbjct: 138 IARL-GTEDFPRIRLGVGEKREREDLAAHVLGHFEKEDEKRMEEAYTDAAKACICTVTEG 196
Query: 196 LTESARHFN 204
+ ++ +N
Sbjct: 197 IEKAMNLYN 205
>gi|183220682|ref|YP_001838678.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910783|ref|YP_001962338.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775459|gb|ABZ93760.1| Peptidyl -tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779104|gb|ABZ97402.1| Peptidyl-tRNA hydrolase (PTH) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 188
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 106/172 (61%), Gaps = 4/172 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPGDKYK TRHN +GF ++D A G+S A + GD + L K
Sbjct: 4 FLIVGLGNPGDKYKHTRHN-IGFMILDRLATEFGVSFKDAKKYAETTYSWEGDK-IHLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P +MNLSG++T LA YK+P +++LV D++ LP G ++ + GG GHNGLK ++
Sbjct: 62 PLEFMNLSGKATQTLANLYKIPPSQILVVQDEVDLPFGKIKNKIGGGTAGHNGLKDIVAK 121
Query: 139 FRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
G+++F RLR G+G+P G M+ F+LQ FNA R +D+ + E V L+
Sbjct: 122 L-GSQDFHRLRFGVGKPEKGGMEVADFVLQNFNAEERNTLDSLITESVSKLQ 172
>gi|94265982|ref|ZP_01289705.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93453448|gb|EAT03864.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAK 78
L GLGNPG KY+ TRHN +GF ID A GIS+ +A G+G + PV+L K
Sbjct: 3 LVAGLGNPGAKYEDTRHN-IGFLFIDHLALRHGISLKEESKWEAASGRGTLWGQPVMLVK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG + G LA +Y++ V VFHD++ LP G R+ G GGHNG++S++++
Sbjct: 62 PLTYMNLSGRAVGRLARFYRIEAEAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLIDH 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERI 177
G+R+F R R+G+GRPP Q ++L F+ R+ +
Sbjct: 122 L-GSRDFVRFRLGVGRPPEQHPTAGYVLSSFSPEERQAL 159
>gi|310657788|ref|YP_003935509.1| peptidyl-tRNA hydrolase [[Clostridium] sticklandii]
gi|308824566|emb|CBH20604.1| peptidyl-tRNA hydrolase [[Clostridium] sticklandii]
Length = 186
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG KY+ TRHN VGF +D A GI +N + K+ G+G +G V+L K
Sbjct: 2 YLIVGLGNPGSKYEKTRHN-VGFVTVDVLAGQLGIKVNKLKFKSLIGEGNIGSEKVVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE+ +YK +++ V +DD+ L G LR+R G G HNG+++++
Sbjct: 61 PQTYMNLSGEAVMQAINFYKPDHDKIFVIYDDIDLDVGRLRIRKKGSGGTHNGMRNII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R RIG+ +P D +F+ FN + + A+ + + L + + + +
Sbjct: 120 LTGFDDFPRFRIGVSKPKNGQDLASFVTSGFNKDEIKPLCEAIDNAADAIVLAIKEDIDK 179
Query: 199 SARHFNT 205
+ +N
Sbjct: 180 AMNKYNV 186
>gi|429729369|ref|ZP_19264028.1| aminoacyl-tRNA hydrolase [Corynebacterium durum F0235]
gi|429149393|gb|EKX92371.1| aminoacyl-tRNA hydrolase [Corynebacterium durum F0235]
Length = 199
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 6/189 (3%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGI--SMNTVHCKAT--FGQG 67
T PWL VGLGNPG +Y+ TRHN VGF ++D A+ S ++H ++ +
Sbjct: 3 ATHTDSPWLVVGLGNPGPQYETTRHN-VGFMVLDELADRTPPMPSTFSIHKRSNSHVVET 61
Query: 68 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHG 127
GD ++LAKP+++MNLSG L +YK+P ++V HD++ L +RL+ GG
Sbjct: 62 RFGDKKIILAKPRSFMNLSGGPIAALIQFYKVPKENIIVVHDELDLDFDTVRLKLGGGDN 121
Query: 128 GHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 187
GHNGL+S + G +++ R+R+GIGRPPG+ P ++L+ F+ E + + E
Sbjct: 122 GHNGLRSTTKSL-GTKDYYRIRVGIGRPPGRQTPANYVLRPFSKEEFEGLPLICEHAAEG 180
Query: 188 LKLLLSKGL 196
+L++++GL
Sbjct: 181 AELIINQGL 189
>gi|363422862|ref|ZP_09310935.1| peptidyl-tRNA hydrolase [Rhodococcus pyridinivorans AK37]
gi|359732579|gb|EHK81592.1| peptidyl-tRNA hydrolase [Rhodococcus pyridinivorans AK37]
Length = 190
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 3/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG KY+ TRHN +GF + D A G + A Q + V++AK
Sbjct: 7 LVVGLGNPGPKYENTRHN-IGFMVADVLAGRVGGKFSAHKRSNADIVQARLDGRQVIIAK 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+TYMNLSG LA ++ + + V+V HD++ L G +RL+ GG GHNGL+S +
Sbjct: 66 PRTYMNLSGGPVASLAKFFSVDPSNVIVLHDELDLDFGTIRLKLGGGENGHNGLRSTSSA 125
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
G +++ R+R+GIGRPPG+ DP F+L+ F+A R+ +D +EG + +
Sbjct: 126 L-GTKDYLRVRMGIGRPPGRQDPADFVLKPFSATERKELDVWCEEGADAV 174
>gi|302876605|ref|YP_003845238.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|307687279|ref|ZP_07629725.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|302579462|gb|ADL53474.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
Length = 188
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 111/188 (59%), Gaps = 4/188 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGN G +Y+ TRHN VGFE++D A+ I +N V K G+GF+ + V+L K
Sbjct: 2 FVIFGLGNIGKEYESTRHN-VGFEVVDILADKYNIQVNRVKFKGEIGEGFINNEKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE + +YK+P ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 61 PTTYMNLSGECVREVMDFYKIPKENLIVIYDDISLDVGKLRIRQKGSAGGHNGIKNILLH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
GN F R+++G+G P G + +L +F +E ++ + + +L+ G+ +
Sbjct: 121 L-GNDVFPRVKVGVGAPKGNL--INHVLGRFQKEEQETMNKVYDVAAQGVLDILNLGVLD 177
Query: 199 SARHFNTI 206
+ +N I
Sbjct: 178 AMNKYNGI 185
>gi|408501196|ref|YP_006865115.1| peptidyl-tRNA hydrolase [Bifidobacterium asteroides PRL2011]
gi|408466020|gb|AFU71549.1| peptidyl-tRNA hydrolase [Bifidobacterium asteroides PRL2011]
Length = 199
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 113/194 (58%), Gaps = 10/194 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPV 74
WL GLGNPGD+YKGTRHN +GF D AE +++ A G+G + P
Sbjct: 6 WLIAGLGNPGDEYKGTRHN-MGFMCADLLAERWSVNLRDHKGLAQLGRGTLDLEGRRIPF 64
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
LAKP T+MN SG++ + +YY +P+ RV+V HDDM L G ++++ G GGHNG++S
Sbjct: 65 FLAKPLTFMNDSGDALASICSYYHIPVGRVVVIHDDMDLEFGRIKVKAGGSSGGHNGIRS 124
Query: 135 VMNNFRGNREFARLRIGIGR----PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+ + G+ +AR+R+G+G P ++L F R+R+ L +G + ++
Sbjct: 125 IDRSL-GSNAYARVRMGVGHARRGPDAHRRTVDWVLGTFVGDQRKRLPEFLADGADAAEI 183
Query: 191 LLSKGLTESARHFN 204
+++KGL+++ FN
Sbjct: 184 VITKGLSQAQELFN 197
>gi|399523773|ref|ZP_10764379.1| aminoacyl-tRNA hydrolase [Atopobium sp. ICM58]
gi|398375191|gb|EJN52638.1| aminoacyl-tRNA hydrolase [Atopobium sp. ICM58]
Length = 200
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 116/195 (59%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVG 70
PWL VGLGNPG +Y TRHN VG+ +D A G ++ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYASTRHN-VGYLTLDVLASRDGATLTSHRSRTHTADVRLGIGPGGVP 64
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
V+LA+ +YMN SG LA+++K+ +R+LV HDDM LP LRL+ GG GGHN
Sbjct: 65 GPRVILARSDSYMNTSGGPISALASFHKIEPSRILVIHDDMDLPAHTLRLKVGGGEGGHN 124
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GLKS+ + G R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++
Sbjct: 125 GLKSLTQHL-GTRDYARLRIGVGRPPGRMDPADYVLAALPSKERPDWDVTFEQAADVVED 183
Query: 191 LLSKGLTESARHFNT 205
+++KG + +T
Sbjct: 184 IVTKGFAPTQMALHT 198
>gi|223933456|ref|ZP_03625441.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|302023114|ref|ZP_07248325.1| peptidyl-tRNA hydrolase [Streptococcus suis 05HAS68]
gi|330831856|ref|YP_004400681.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
gi|386583134|ref|YP_006079537.1| peptidyl-tRNA hydrolase [Streptococcus suis D9]
gi|223897894|gb|EEF64270.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|329306079|gb|AEB80495.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
gi|353735280|gb|AER16289.1| peptidyl-tRNA hydrolase [Streptococcus suis D9]
Length = 189
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 110/189 (58%), Gaps = 8/189 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLL 76
L +GLGNPGD+Y T+HN VGF ++D A+ + ++ N H K A G F+ + L
Sbjct: 4 LIIGLGNPGDRYFETKHN-VGFMLLDKIAKRENVTFN--HDKIFQADIGTTFIDGEKIYL 60
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP T+MN SG++ L AYY L +LV +DD+ + G +R R G GGHNG+KS++
Sbjct: 61 VKPTTFMNESGKAVHALMAYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIV 120
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+ G +EF R++IGIGRP G+M +L F+ R ID AL + + + + L +
Sbjct: 121 KHI-GTQEFDRIKIGIGRPKGKMSVVNHVLSGFDTEDRIEIDLALDKLDKAVNVYLEEDD 179
Query: 197 TESA-RHFN 204
++ R FN
Sbjct: 180 FDTVMRKFN 188
>gi|257792490|ref|YP_003183096.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
gi|257476387|gb|ACV56707.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
Length = 185
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG++Y+ TRHN GF+ +D AE G C A +G D ++LAKP
Sbjct: 3 LIVGLGNPGEEYEHTRHN-AGFDAVDLIAEEVGARYWKTECGALTAKGAYRDHDLVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
Q+YMN SG L Y + ++V HD++ + G +R++ GGH GHNGL+++ +
Sbjct: 62 QSYMNTSGGPVKQLMNAYGVDAEHLIVVHDELDIDPGTVRVKFGGGHAGHNGLRAICDKL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G R++ R+R+GIGRPPG+M ++L K A + A G + L+ GL ++
Sbjct: 122 -GTRDWHRVRVGIGRPPGRMPVVDWVLSKPKKDAADDFVQATDRGAQAALSLVQVGLEKT 180
Query: 200 ARHFN 204
+ FN
Sbjct: 181 QQAFN 185
>gi|404442255|ref|ZP_11007435.1| peptidyl-tRNA hydrolase [Mycobacterium vaccae ATCC 25954]
gi|403657201|gb|EJZ11982.1| peptidyl-tRNA hydrolase [Mycobacterium vaccae ATCC 25954]
Length = 192
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 120/197 (60%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN +GF ++D A+ G VH K A G +
Sbjct: 1 MAEPVLVVGLGNPGPNYATTRHN-IGFMVVDVLADRMGEKFK-VHKKSGAEVATGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ YMN SG GPLA +Y + V+V HD++ + G +RL+ GG GHNGL
Sbjct: 59 SVVLAKPRVYMNESGRQVGPLAKFYSVAPAEVVVIHDELDIDFGRIRLKGGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + G+ +F R+R+GIGRPPGQ F+L+ FN++ R+ + T +++ + +LL+
Sbjct: 119 RSVSSAL-GSNDFHRVRVGIGRPPGQKSGATFVLENFNSVERKEVPTIIEQAADATELLI 177
Query: 193 SKGLTESARHFNTIQKY 209
+ GL E A+ NT+ +
Sbjct: 178 AHGL-EPAQ--NTVHAW 191
>gi|338733704|ref|YP_004672177.1| peptidyl-tRNA hydrolase [Simkania negevensis Z]
gi|336483087|emb|CCB89686.1| peptidyl-tRNA hydrolase [Simkania negevensis Z]
Length = 190
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 113/189 (59%), Gaps = 7/189 (3%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVL 75
+ +L GLGNPG KY+ TRHN GF ++ AFAE QG + + + G V ++ V+
Sbjct: 4 KGFLITGLGNPGKKYENTRHN-FGFMVVKAFAEKQGWTFKADSNLQGEIASGTVSESKVI 62
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L P+TYMNLSG+S + YYK+ L LV DD+ L G LR R G GGHNGLK +
Sbjct: 63 LLLPKTYMNLSGQSVRKVLDYYKIDLTHFLVVADDIALDFGTLRFREKGSSGGHNGLKDI 122
Query: 136 MNNFRGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL-KLLLS 193
++ G +E+ RLR+GIG R G ++ ++L F+A ++ + ++EGV+ L K L+
Sbjct: 123 ESHL-GTQEYQRLRLGIGDRDHGYLED--YVLSPFSAEEQKDLPKVIEEGVDFLDKWLMK 179
Query: 194 KGLTESARH 202
+ +SA+
Sbjct: 180 ETYEKSAKE 188
>gi|290959808|ref|YP_003490990.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
gi|260649334|emb|CBG72449.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
Length = 200
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
T + PWL GLGNPG +Y RHN VGF + D AE G +A +G +G
Sbjct: 4 TTDPSAPWLIAGLGNPGPEYAANRHN-VGFMVADLLAERIGGRFKRAGKAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
+ V+LAKP ++MNLSG L +YK+P+ ++ HD++ + GVLRL+ GG
Sbjct: 63 PPGPANRRVILAKPMSFMNLSGGPVTALRDFYKVPVANIVAIHDELDIDYGVLRLKLGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F+A R+ +D +
Sbjct: 123 DNGHNGLKSMTKAM--GSDYHRVRFGIGRPPGRMQVADFVLKDFSATERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 181 DAVECLVIEGLERAQGTYNS 200
>gi|253576882|ref|ZP_04854207.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843749|gb|EES71772.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 186
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG +Y+ TRHN +GF +D A GI + CKA G+G + V+L K
Sbjct: 3 WI-VGLGNPGAQYEKTRHN-IGFMAVDELARRHGIEIKQSKCKALIGEGMLPGGKVVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ YYK + ++V +DD+ G RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGEAVRAYMDYYKASIEDMIVVYDDLDTELGRNRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F + +D ++Q + L+ L +
Sbjct: 121 I-GTQTFNRIRMGISRPEPGYAVVDYVLSPFPKKDKPLLDQSIQAACDALEYSLDHTFEQ 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAKFN 185
>gi|311740786|ref|ZP_07714613.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304306|gb|EFQ80382.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 197
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVL 75
P L VGLGNPG KY GTRHN +GF++ D A + +S +VH K +G G ++
Sbjct: 24 PLLVVGLGNPGPKYAGTRHN-IGFDVADELA-GEIMSSFSVHKKTNTEVAEGMAGGRKII 81
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
AKP+++MNLSG L+ Y+ L ++V HD++ L G ++LR GG GHNGL+S
Sbjct: 82 CAKPRSFMNLSGGPIKALSQYFHLSPTDIIVVHDELELDFGTVKLRKGGGDHGHNGLRST 141
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
+ G +++ RL IGIGRPPG+MDP +F+L+ + + I + VE
Sbjct: 142 TKSL-GTKDYQRLSIGIGRPPGRMDPASFVLKPWAKQEKAEIPILCADAVE 191
>gi|306820707|ref|ZP_07454335.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|402310282|ref|ZP_10829248.1| aminoacyl-tRNA hydrolase [Eubacterium sp. AS15]
gi|304551317|gb|EFM39280.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|400368734|gb|EJP21741.1| aminoacyl-tRNA hydrolase [Eubacterium sp. AS15]
Length = 187
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ T+HN VGF +D +E I ++ + A G+G V+L K
Sbjct: 2 YIIVGLGNPGTKYQNTKHN-VGFMCLDLLSEKLNIKIDRIKFNALIGEGNYKGEKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSG++ + +YK+ + V +DD+ + G LR+R G G HNG+K+++
Sbjct: 61 PQTFMNLSGQAVNQIMNFYKVERQNLFVLYDDIDIDIGKLRIRKKGSSGTHNGMKNII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R RIG+ +PP MD +++L KF +++ L + V+ + + +
Sbjct: 120 LLGYDDFPRFRIGVSKPPAYMDLASYVLSKFTDEEVKKLIPVLNDTVDACLYAIETDVDK 179
Query: 199 SARHFNT 205
S +N
Sbjct: 180 SMNKYNV 186
>gi|295106616|emb|CBL04159.1| peptidyl-tRNA hydrolase [Gordonibacter pamelaeae 7-10-1-b]
Length = 185
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG++Y TRHN GF+ +DA A G C + +G D ++LAK
Sbjct: 2 YLIVGLGNPGEEYAHTRHN-AGFDAVDAIAGEVGARYWKTECGSLTAKGAYRDVDLVLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQ+YMN SG L Y + ++V HD++ + G +R++ GGH GHNGL+S+ +
Sbjct: 61 PQSYMNTSGGPVKQLMNAYGVDAEHLIVIHDELDIDPGTVRVKFGGGHAGHNGLRSICDK 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G R+++R+R+GIGRPPG+M ++L A + A+ G + L++ GL +
Sbjct: 121 L-GTRDWSRVRVGIGRPPGRMPVVDWVLSLPKKEAADDFAYAVDRGAQAALSLVTAGLEK 179
Query: 199 SARHFN 204
+ + +N
Sbjct: 180 TQQAYN 185
>gi|405983988|ref|ZP_11042293.1| peptidyl-tRNA hydrolase [Slackia piriformis YIT 12062]
gi|404388803|gb|EJZ83885.1| peptidyl-tRNA hydrolase [Slackia piriformis YIT 12062]
Length = 185
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPGD Y TRHN GF+ ID AE + C A + ++LAKP
Sbjct: 3 LIVGLGNPGDDYAHTRHN-AGFDAIDDLAEQLRATYWKTECGALTAKVKYRGEELILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
Q+YMN+SG L A Y++ ++V HD++ + G +R++ GG GHNGLKS+ +
Sbjct: 62 QSYMNVSGGPVKQLCATYRIAPADIVVIHDELDIDPGTVRVKFGGGLAGHNGLKSIADKL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ +++ R+R GIGRPPG+M ++L AR+ D A E + LL GL ++
Sbjct: 122 Q-TKDWTRVRTGIGRPPGRMPVADWVLSLPKKEARDDFDQATHLAAEAVLFLLENGLEKT 180
Query: 200 ARHFN 204
+ FN
Sbjct: 181 QQRFN 185
>gi|209527283|ref|ZP_03275793.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
gi|376003251|ref|ZP_09781065.1| peptidyl-tRNA hydrolase (PTH) [Arthrospira sp. PCC 8005]
gi|423066186|ref|ZP_17054976.1| Aminoacyl-tRNA hydrolase [Arthrospira platensis C1]
gi|209492271|gb|EDZ92616.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
gi|375328411|emb|CCE16818.1| peptidyl-tRNA hydrolase (PTH) [Arthrospira sp. PCC 8005]
gi|406712228|gb|EKD07417.1| Aminoacyl-tRNA hydrolase [Arthrospira platensis C1]
Length = 201
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVL- 75
P L VGLGNPG KY TRHN +GFE +D A+ G +++ + FG+ + L
Sbjct: 5 PQLIVGLGNPGSKYDRTRHN-IGFEAVDFLADKWGATLSENRRFQGVFGEAKMRSHDKLY 63
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG++ + +YKLP VLV +DDM LP G LRLR +G GGHNG+KS
Sbjct: 64 LLKPLTYMNRSGQAIRSVVDWYKLPPESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSA 123
Query: 136 MNNFRGNREFARLRIGIGRPPGQM-----DPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+ + G + F RLR+GI +P + + + +L KF R+ +D LQ+ +E ++L
Sbjct: 124 IAHL-GTQNFPRLRLGIDKPQAAVLNHDRETISHVLGKFPPNERQTMDKLLQQVLEAIEL 182
Query: 191 LLSKGLTESARHFNT 205
L G+ ++ +N+
Sbjct: 183 ALEDGVEKAMSLYNS 197
>gi|307111354|gb|EFN59588.1| hypothetical protein CHLNCDRAFT_132968 [Chlorella variabilis]
Length = 301
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 111/181 (61%), Gaps = 2/181 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG ++ GTRHN G+ ++ A A ++++ A + + VLLAK
Sbjct: 49 WLIVGLGNPGPQFAGTRHN-AGWLVVAAVARLLDVAVDRFQANAEVARSRLAGKSVLLAK 107
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T MNLSGE+ LA +Y +P RVLV +DD+ LP G +RLR GG GGH G+KSV +
Sbjct: 108 PLTTMNLSGEAVAGLADFYHIPPERVLVVYDDLDLPTGTVRLRPRGGPGGHGGMKSVAAH 167
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+G+ F R+R+GIGRPP +LQ F R ++D A+Q+ V V++ +LS GL
Sbjct: 168 LQGD-NFPRIRLGIGRPPAGTTVLDHVLQDFGEAERLQVDAAVQQAVGVIRAVLSVGLER 226
Query: 199 S 199
+
Sbjct: 227 A 227
>gi|417043747|ref|ZP_11948575.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus MTCC 5462]
gi|328478087|gb|EGF47960.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus MTCC 5462]
Length = 185
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y GT+HN +GF ++D A+ G+++N + A V D V L KP
Sbjct: 3 MIVGLGNPGRQYAGTKHN-MGFMVVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 62 QTYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+ EF RL+IGI P Q ++L F + ID A+ + + L+ L+
Sbjct: 121 TGSDEFYRLKIGIQHPQRQR-VVDWVLTPFAKTDQPVIDAAITKADDALEDWLN 173
>gi|403743480|ref|ZP_10953064.1| peptidyl-tRNA hydrolase [Alicyclobacillus hesperidum URH17-3-68]
gi|403122724|gb|EJY56923.1| peptidyl-tRNA hydrolase [Alicyclobacillus hesperidum URH17-3-68]
Length = 190
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
+GLGNPG KY+ TRHN VGF ID A+ G+ ++ ++ G+ + PVLL KPQ
Sbjct: 4 IIGLGNPGFKYERTRHN-VGFWAIDNAAQRLGVVVDRAKFQSLIGEARIAGEPVLLVKPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN+SG + + +YKL + + +LV +DDM P G L+LR G GGHNG+KS++ +
Sbjct: 63 TYMNVSGVAAAEIVRFYKLDVEQDILVIYDDMDFPPGQLKLRARGSAGGHNGVKSLIQSL 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R+RIGIGRPP D ++L F R R++ A E + G +
Sbjct: 123 -GTDTFCRIRIGIGRPPRGSDIIPYVLGTFPEEERVRVEKAAAAAAEAAMHAVEHGFEHA 181
Query: 200 ARHFNTI 206
+N +
Sbjct: 182 MNQYNRV 188
>gi|167747444|ref|ZP_02419571.1| hypothetical protein ANACAC_02164 [Anaerostipes caccae DSM 14662]
gi|317471173|ref|ZP_07930544.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
gi|167652806|gb|EDR96935.1| aminoacyl-tRNA hydrolase [Anaerostipes caccae DSM 14662]
gi|316901388|gb|EFV23331.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
Length = 190
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ TRHN +GF ID A I +++ KA G G++G VLL KP
Sbjct: 3 VIVGLGNPGRQYERTRHN-IGFAAIDYIAGKNQIEISSKKHKALIGSGYLGGQKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES + +YKL + +V DD+ L G LR+R G GGHNG+KS++++
Sbjct: 62 QTFMNLSGESLRGVMDFYKLEPSDFIVIFDDISLDVGQLRIRRKGSAGGHNGIKSIISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ +F R++IG+G P D ++L F+ E D + + +KL++ ++ +
Sbjct: 122 -GSMDFPRIKIGVGEKPKGYDLADYVLGHFSKGEIEIYDDVFPDVDDAVKLMVMDDISGA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNQYN 185
>gi|418475414|ref|ZP_13044815.1| peptidyl-tRNA hydrolase [Streptomyces coelicoflavus ZG0656]
gi|371543979|gb|EHN72738.1| peptidyl-tRNA hydrolase [Streptomyces coelicoflavus ZG0656]
Length = 198
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 112/201 (55%), Gaps = 9/201 (4%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFV 69
T PWL GLGNPG +Y RHN VGF + D AE G +A +G +
Sbjct: 1 MTTDAGAPWLVAGLGNPGGEYAANRHN-VGFMVADLLAERMGARFKRHGKAQAQVVEGRI 59
Query: 70 G-----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 124
G + V+LAKP ++MN+SG L +YK+P+ ++ HD++ + GVLRL+ G
Sbjct: 60 GPPGPANRRVILAKPMSFMNVSGGPVTVLRDFYKVPVGNIVAVHDELDIDYGVLRLKLGG 119
Query: 125 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 184
G GHNGLKS+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 120 GDNGHNGLKSITKSL--GADYHRVRFGIGRPPGRMPVADFVLRDFSSAERKELDYFVDRA 177
Query: 185 VEVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 178 ADAVEALVIEGLERAQSAYNS 198
>gi|375306204|ref|ZP_09771505.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Aloe-11]
gi|375081791|gb|EHS59998.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Aloe-11]
Length = 186
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG +Y+ TRHN VGF +DA A I +N CKA G+G +G +L K
Sbjct: 3 WI-VGLGNPGPQYEKTRHN-VGFMALDALASRHNIQINQSKCKALIGEGHIGGVKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES YYK L ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGESLRAYMDYYKADLEDLIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F ++ + +++ L+ L
Sbjct: 121 -TGTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKDLLTGMIEDTCNALEYSLGHPFER 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAEFN 185
>gi|373495518|ref|ZP_09586101.1| peptidyl-tRNA hydrolase [Eubacterium infirmum F0142]
gi|371964655|gb|EHO82166.1| peptidyl-tRNA hydrolase [Eubacterium infirmum F0142]
Length = 190
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 112/189 (59%), Gaps = 7/189 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG KY+ TRHN +GF +ID A +S++ K+ G+ +G V+L K
Sbjct: 2 FLIAGLGNPGKKYEKTRHN-LGFMVIDELARRNSVSVDKSKFKSLTGEFKLGGEKVILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE+ +YK+ L +LV +DD+ +P G LR+R +G G HNG+KSV++
Sbjct: 61 PQTYMNLSGEAIREAVNFYKIDLKNLLVIYDDLDIPMGALRIRTSGSSGTHNGMKSVVSQ 120
Query: 139 FRGNREFARLRIGIG--RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G+R+F R+RIGIG + +D F++ K + + + E ++ ++ G+
Sbjct: 121 L-GSRDFPRVRIGIGSNKDDNLID---FVIGKPSKSEEAVLSDTVSEAAHAVECYIADGI 176
Query: 197 TESARHFNT 205
++ FN+
Sbjct: 177 DKAMNRFNS 185
>gi|199598793|ref|ZP_03212205.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
gi|199590298|gb|EDY98392.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
Length = 183
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y GT+HN +GF ++D A+ G+++N + A V D V L KP
Sbjct: 1 MIVGLGNPGRQYAGTKHN-MGFMVVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVKP 59
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 60 QTYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA- 118
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+ EF RL+IGI P Q ++L F + ID A+ + + L+ L+
Sbjct: 119 TGSDEFYRLKIGIQHPQRQR-VVDWVLTPFAKTDQPVIDAAITKADDALEDWLN 171
>gi|352518631|ref|YP_004887948.1| peptidyl-tRNA hydrolase [Tetragenococcus halophilus NBRC 12172]
gi|348602738|dbj|BAK95784.1| peptidyl-tRNA hydrolase [Tetragenococcus halophilus NBRC 12172]
Length = 186
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ T+HN VGF ++ A++ ++ +A FV +LL KP
Sbjct: 3 MIVGLGNPGKKYENTKHN-VGFMTVERLAKTHEVTFKKNPFEAEVADFFVNGEKILLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GPL Y+ + ++V HDD+ L G +RLR G GGHNG+KS++++
Sbjct: 62 QTYMNDSGRAVGPLMTYFGIYKEELIVVHDDLDLTVGKIRLRQKGSAGGHNGIKSIISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLKLLLSKG 195
G+ EF RL+IGIG P +LQ FN A+ E ID A +E ++ + +
Sbjct: 122 -GSNEFGRLKIGIGHPQEHTTVVNHVLQPFNKQQQAVMTESIDKA-KEAIDY--FIETNN 177
Query: 196 LTESARHFN 204
T+ FN
Sbjct: 178 FTQVMNRFN 186
>gi|146329537|ref|YP_001208995.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
gi|172047324|sp|A5EWU9.1|PTH_DICNV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146233007|gb|ABQ13985.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
Length = 189
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 113/185 (61%), Gaps = 4/185 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAK 78
L VGLGNPG++Y+ TRHN GF ++D A+ + T A FG+ + + L K
Sbjct: 4 LIVGLGNPGEQYQKTRHN-AGFWLLDQTAQDYSCRLRTEKKFFAEFGEIAINQQKIFLLK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SG+S + +Y + ++L+ HD++ LP G ++L+ +GGHGGHNGL+ ++
Sbjct: 63 PQTFMNASGKSLAAVCRFYHIEPQQILIIHDELDLPEGKIKLKKSGGHGGHNGLRDIIAA 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+++F RLRIGIGRP ++L+ +A ER++ +L G + ++ L+++G E
Sbjct: 123 L-ASQDFYRLRIGIGRPENSTQVIDYVLKAPSATHMERLNESLSYGKKAIEKLITEG-DE 180
Query: 199 SARHF 203
A H+
Sbjct: 181 KAMHW 185
>gi|282898618|ref|ZP_06306606.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
gi|281196486|gb|EFA71395.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
Length = 210
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGF-VGDAPVL 75
P L VGLGNP KY TRHN +GF IDA + + I++ + FG+G +G +
Sbjct: 13 PQLIVGLGNPEPKYDQTRHN-IGFAAIDAISRNWHIAVTENRKFQGQFGEGLALGSKKIR 71
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ KP TYMN SGES + ++YKLP VLV +DDM LP G +RLR +G GGHNG+KS
Sbjct: 72 ILKPLTYMNRSGESIQAVTSWYKLPPESVLVIYDDMDLPLGKIRLRLSGSAGGHNGMKST 131
Query: 136 MNNFRGNREFARLRIGIGRPPG-----QMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+++ ++ F RLRIGIG+P D + +L KF+ + ID L VE ++L
Sbjct: 132 ISHLN-SQNFPRLRIGIGKPKNLPNNDDGDTVSHVLGKFSPQEAKLIDPILAFVVECVEL 190
Query: 191 LLSKGLTESARHFNT 205
L +G+ ++ N+
Sbjct: 191 TLKQGVEKAMNRCNS 205
>gi|302388385|ref|YP_003824207.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
gi|302199013|gb|ADL06584.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
Length = 188
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+ TRHN VGFE +D A+ G + +A G G +G V+L+K
Sbjct: 2 YIIAGLGNPTREYEKTRHN-VGFEAVDILADKLGARVTEKKHRAFCGTGRIGPEKVILSK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES +A +YK+ + +++ DD+ L G LR+R G GGHNGLK+++N+
Sbjct: 61 PQTFMNLSGESIRAMADFYKVEPDHIIIICDDINLAEGQLRIRTKGSAGGHNGLKNIINH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF+R+R+G+G P +MD ++L +F +D A Q+ E +++++G
Sbjct: 121 L-GTQEFSRIRVGVGEKPKEMDLADYVLGRFPREQEGVMDQAYQDAAEAAIMMVTEGAEA 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 AMNFFN 185
>gi|339626511|ref|YP_004718154.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus TPY]
gi|379005968|ref|YP_005255419.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus DSM 10332]
gi|339284300|gb|AEJ38411.1| peptidyl-tRNA hydrolase [Sulfobacillus acidophilus TPY]
gi|361052230|gb|AEW03747.1| Peptidyl-tRNA hydrolase [Sulfobacillus acidophilus DSM 10332]
Length = 182
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 11/187 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGIS--MNTVHCKATFGQGFVGDAPVLLA 77
L VGLGNPG Y TRHN VGF ++DA+A +G+ + A QG+ L
Sbjct: 4 LIVGLGNPGPDYVNTRHN-VGFMVLDAYARHRGLRFRLGRYGYLADSDQGW-------LM 55
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP T+MNLSG++ GP Y+L ++VLV HDD+ LP G +R+R +G GGHNG+KS++
Sbjct: 56 KPMTFMNLSGDAVGPFVRRYRLTPDQVLVVHDDLDLPLGRIRIRAHGSSGGHNGIKSIIQ 115
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G F R+R+GI RPP M ++L F+A R + + VE L + +GL
Sbjct: 116 AL-GTDRFPRMRLGISRPPASMPVIDWVLAPFSADERRVLQDTIARAVEALDGIGQEGLE 174
Query: 198 ESARHFN 204
+ +N
Sbjct: 175 WAMSRYN 181
>gi|354613091|ref|ZP_09031024.1| Peptidyl-tRNA hydrolase [Saccharomonospora paurometabolica YIM
90007]
gi|353222563|gb|EHB86867.1| Peptidyl-tRNA hydrolase [Saccharomonospora paurometabolica YIM
90007]
Length = 198
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y RHN +GF ++D A+ G S A +G + D V+LAKP
Sbjct: 16 LLAGLGNPGPRYAANRHN-IGFLVLDELADRLGGSFKAHKGGAEVLEGRLADRGVVLAKP 74
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
++YMNLSG A +Y + ++ V+V HD++ L G ++L+ GG GHNGL+S+ +
Sbjct: 75 RSYMNLSGGPVAGTARFYSIAVDGVVVIHDELDLDFGAVKLKFGGGDNGHNGLRSITKSL 134
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G R++ R+R G+GRPPG+M P ++L+ F+ + R+ + + + + L+ GL +
Sbjct: 135 -GTRDYYRVRFGVGRPPGRMSPADYVLKDFSTVERKDLAVHIDRCADAVTELVRSGLAAA 193
Query: 200 ARHFN 204
F+
Sbjct: 194 QNAFH 198
>gi|255083292|ref|XP_002504632.1| peptidyl-tRNA hydrolase, potentially chloroplast precursor
[Micromonas sp. RCC299]
gi|226519900|gb|ACO65890.1| peptidyl-tRNA hydrolase, potentially chloroplast precursor
[Micromonas sp. RCC299]
Length = 287
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 7/213 (3%)
Query: 2 LINRFLRRGFCTA-VARP--WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NT 57
LI R G A VA P WL VGLGNPG +++GTRHN GF+++D A ++GIS +
Sbjct: 17 LIERVRGHGSAGAGVAEPGRWLLVGLGNPGSRFEGTRHNA-GFDVLDILARTEGISWTDA 75
Query: 58 VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGV 117
+A G G + PVLLAKPQTYMNLSGES L +YK+P + +LV +DD+ G
Sbjct: 76 ARHRAKVGVGKIAGVPVLLAKPQTYMNLSGESVRSLCRWYKIPNSNLLVVYDDLDTAVGA 135
Query: 118 LRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERI 177
++L+ GGHGGHNG++++++ G++ FAR++ GIGRP ++ +L KF +
Sbjct: 136 IKLKGKGGHGGHNGIRNIIDEVCGDKVFARVKFGIGRPKPGVEVYDHVLTKFGDDEATEL 195
Query: 178 DT--ALQEGVEVLKLLLSKGLTESARHFNTIQK 208
++ + + ++ +L GL ++ NT K
Sbjct: 196 ESKGTWAKACDAVRGVLVDGLDKTMSAVNTEHK 228
>gi|366090578|ref|ZP_09456944.1| peptidyl-tRNA hydrolase [Lactobacillus acidipiscis KCTC 13900]
Length = 185
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G KY+ TRHN VGF +++ A + N C+A F+ + VLL KP
Sbjct: 3 MIVGLGNIGKKYENTRHN-VGFSVVEELANRYNVDFNKEKCEALIATAFISNEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + GPL Y+K+ + +++ HDDM L G +RLR G GGHNG+KSV+ +
Sbjct: 62 TTFMNDSGRAVGPLLDYFKIEVEDLIIIHDDMDLQLGRIRLRQKGSAGGHNGIKSVIAHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
+ F R+++GI P QM ++L +F+ + + A+ + + ++ L+
Sbjct: 122 H-TQAFKRIKVGIDHPQ-QMSVVNWVLSRFSVTEQALMKDAVTQACDAVEYWLA 173
>gi|258510198|ref|YP_003183632.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476924|gb|ACV57243.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 191
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ TRHN GF ID AE ++ A G VLL KP
Sbjct: 3 VIVGLGNPGREYERTRHN-AGFMAIDILAEKLAARVDQADFHALVGDARYAGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
TYMN+SG S G + YY++ P ++V +DDM P GV+RL+ G GGHNG+KS++ +
Sbjct: 62 HTYMNVSGLSVGEIVRYYRIDPAEDLMVLYDDMDFPPGVVRLKAQGSAGGHNGIKSIIES 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R+RIGIGRPP ++L F+ + AL+ + + +G E
Sbjct: 122 L-GTEKFGRVRIGIGRPPKGAPIVPYVLGAFSREEEPHVRRALETAADAALYAVERGFAE 180
Query: 199 SARHFNTIQK 208
+ +N +
Sbjct: 181 AMTRYNAAAR 190
>gi|390457080|ref|ZP_10242608.1| peptidyl-tRNA hydrolase [Paenibacillus peoriae KCTC 3763]
Length = 186
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG +Y+ TRHN VGF +DA A I +N CKA G+G +G +L K
Sbjct: 3 WI-VGLGNPGPQYEKTRHN-VGFMALDALASRHNIQINQSKCKALIGEGHIGGVKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES YYK L ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGESLRAYMDYYKADLEDLIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F ++ + +++ L+ L
Sbjct: 121 -TGTQSFNRIRMGISRPEPGYAIVDYVLGTFPRKEKDLLIGMIEDTCSALEYSLGHPFER 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAEFN 185
>gi|154483283|ref|ZP_02025731.1| hypothetical protein EUBVEN_00984 [Eubacterium ventriosum ATCC
27560]
gi|149735793|gb|EDM51679.1| aminoacyl-tRNA hydrolase [Eubacterium ventriosum ATCC 27560]
Length = 184
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+ GLGNP +Y TRHN +GF++ID A G+ + T KA G G +G V+L K
Sbjct: 2 YAVFGLGNPDKEYDKTRHN-IGFDVIDELASQMGVEVKTKRHKALCGIGNIGGEKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES + +YKL P N ++V DD+ L G +R+R G GGHNGLKS++N
Sbjct: 61 PQTYMNLSGESVRAVMDFYKLDPENDIIVISDDINLATGRIRIRAQGSAGGHNGLKSIIN 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G ++F R+R+G+G G + +L KF+ R + +++ +++++ + +
Sbjct: 121 H-AGTQKFKRVRVGVGANEGNL--VNHVLGKFSKGERVLAEQGIKDAASAVEVMILEDIN 177
Query: 198 ESARHFN 204
+ FN
Sbjct: 178 TAMNKFN 184
>gi|157363318|ref|YP_001470085.1| peptidyl-tRNA hydrolase [Thermotoga lettingae TMO]
gi|172045981|sp|A8F4D7.1|PTH_THELT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157313922|gb|ABV33021.1| Aminoacyl-tRNA hydrolase [Thermotoga lettingae TMO]
Length = 187
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 6/188 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y RHN VGF +D F E + S + TF Q + L KP
Sbjct: 3 VIVGLGNPGPRYAFNRHN-VGFMFVDRFKEFKKCSTWQHRDRYTFSQC----KDIFLVKP 57
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSG + + + ++V +DD+ LPCG LR++ GG GGH GL+S++ ++
Sbjct: 58 NTFMNLSGIAVIKCQRDFHVTTTDIIVVYDDVDLPCGRLRIKAQGGSGGHRGLQSII-DY 116
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF RLRIGIG P +D ++L+ F ID L + VE + ++L++GL+++
Sbjct: 117 IGTNEFVRLRIGIGPKPENIDLADYVLEDFTEEELRLIDKVLDKAVEAVDVMLNEGLSKA 176
Query: 200 ARHFNTIQ 207
FN+ +
Sbjct: 177 MSVFNSYE 184
>gi|411119817|ref|ZP_11392193.1| peptidyl-tRNA hydrolase [Oscillatoriales cyanobacterium JSC-12]
gi|410709973|gb|EKQ67484.1| peptidyl-tRNA hydrolase [Oscillatoriales cyanobacterium JSC-12]
Length = 216
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 113/194 (58%), Gaps = 7/194 (3%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFV-GDAPV 74
+P L VGLGNPG KY TRHN +GF+++D A+ IS++ FG+G G +
Sbjct: 17 KPQLIVGLGNPGAKYDRTRHN-IGFDVVDLLAQYWHISLSEQKKFHGIFGEGIAPGAQKI 75
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
L KPQT+MN SG++ + +YKLP VLV +DDM LP G LR+R +G GGHNG+KS
Sbjct: 76 RLLKPQTFMNNSGQAMRAVVDWYKLPPESVLVIYDDMDLPIGKLRMRLSGSAGGHNGMKS 135
Query: 135 VMNNFRGNREFARLRIGIGRP---PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+ + G + F RLRIGIG G D + +L KF + + +Q + ++
Sbjct: 136 AIAHL-GTQHFPRLRIGIGSAKAEKGDKDTISHVLGKFAPMEAAMMTEVVQLAADAIECS 194
Query: 192 LSKGLTESARHFNT 205
L++G+ ++ +N+
Sbjct: 195 LTQGIAKAMSLYNS 208
>gi|404214056|ref|YP_006668250.1| Peptidyl-tRNA hydrolase [Gordonia sp. KTR9]
gi|403644855|gb|AFR48095.1| Peptidyl-tRNA hydrolase [Gordonia sp. KTR9]
Length = 186
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 122/192 (63%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
+ VGLGNPG +Y+ TRHN VG + D S G VH K A + +G PVL+A
Sbjct: 1 MIVGLGNPGSRYEKTRHN-VGAMVADGLVASAGARWK-VHKKSGAEVAEVRLGGQPVLVA 58
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+TYMN SG GPLA +Y + ++ ++V HD++ + G +RL+ GG GGHNGL+S ++
Sbjct: 59 KPRTYMNESGRQIGPLAKFYSVSVDDLIVVHDELDIDFGAVRLKRGGGEGGHNGLRS-LS 117
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+RIGIGRPPG+ DP F+L+ F + AR ++ + G + ++LL+ + L
Sbjct: 118 QALGTRDYLRVRIGIGRPPGRQDPADFVLKPFPSSARSEVELLIANGCDAVELLVGQDL- 176
Query: 198 ESARHFNTIQKY 209
ESA+ NT+ +
Sbjct: 177 ESAQ--NTVHAW 186
>gi|21221563|ref|NP_627342.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|289771144|ref|ZP_06530522.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
gi|22095998|sp|Q9K3T8.1|PTH_STRCO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|8894758|emb|CAB95918.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|289701343|gb|EFD68772.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
Length = 200
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVG 70
T PWL GLGNPG +Y RHN VGF + D AE G +A +G +G
Sbjct: 4 TTDAGAPWLVAGLGNPGPEYASNRHN-VGFMVADLLAERIGARFKRHGKAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
+ V+LAKP ++MN+SG L +YK+P+ ++ HD++ + GVLRL+ GG
Sbjct: 63 PPGPANRRVILAKPMSFMNVSGGPVTALRDFYKVPVGNIVAVHDELDIDYGVLRLKLGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ + ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 123 DNGHNGLKSITKSL--GADYHRVRFGIGRPPGRMPVADFVLRDFSSTERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 181 DAVEALVIEGLERAQSAYNS 200
>gi|297193931|ref|ZP_06911329.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
gi|197720294|gb|EDY64202.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
Length = 197
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 11/195 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAP--- 73
PWL VGLGNPG Y RHN VGF + D AE G S +A +G +G AP
Sbjct: 7 PWLIVGLGNPGPGYAANRHN-VGFMVADLLAERIGGSFKRAGKAQAQALEGRIG-APGPS 64
Query: 74 ---VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
V+LAKP +YMNLSG L +YK+P + ++ HD++ + G LRL+ GG GHN
Sbjct: 65 NRRVILAKPMSYMNLSGGPVTALRDFYKVPTSNIVAVHDELDIDYGTLRLKLGGGDNGHN 124
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D + + ++
Sbjct: 125 GLKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAVEC 182
Query: 191 LLSKGLTESARHFNT 205
L+ GL + +N+
Sbjct: 183 LVIDGLERAQGTYNS 197
>gi|373471303|ref|ZP_09562360.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371760469|gb|EHO49153.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 202
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 113/195 (57%), Gaps = 3/195 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
++ L VGLGNPG +Y TRHN GF +++ A G + K F + +G+ +
Sbjct: 11 SKMKLIVGLGNPGREYVNTRHN-AGFYVVEKLAYELGEDITERKYKGLFAKARIGNEKAI 69
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L +PQTYMN SGES Y+K+ V+V +DD+ L G LR+R G GGHNG+KS+
Sbjct: 70 LLEPQTYMNNSGESVRAFMDYFKIEAKDVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSL 129
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G +F R+++G+G P +MD +L FNA ++++D A +E +KL++ G
Sbjct: 130 IAHM-GTSDFPRVKMGVGEKPARMDLADHVLGHFNAEDKKKLDEAASHAIEAIKLMVD-G 187
Query: 196 LTESARHFNTIQKYK 210
++A + ++K K
Sbjct: 188 QYDTAMNKYNVKKTK 202
>gi|428304795|ref|YP_007141620.1| peptidyl-tRNA hydrolase [Crinalium epipsammum PCC 9333]
gi|428246330|gb|AFZ12110.1| peptidyl-tRNA hydrolase [Crinalium epipsammum PCC 9333]
Length = 217
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP-VL 75
P L VGLGNP KY TRHN +GFE +DA + S IS++ +A FG+G +
Sbjct: 21 PQLIVGLGNPEPKYDQTRHN-IGFEAVDALSRSWQISLSENRKFQALFGEGRSPKGEKIR 79
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMNLSG++ +YKLP VLV +DDM LP G LR+R +G GGHNG+KS
Sbjct: 80 LIKPLTYMNLSGQAIRAAIDWYKLPPESVLVIYDDMDLPVGRLRMRLSGSAGGHNGMKSA 139
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G F RLRIGIGR + + +L KF+A I L+ + +++ + +G
Sbjct: 140 IAHL-GTDNFPRLRIGIGRASSEKGSVSHVLGKFSADENPLISEVLKIVSDAVEISIKQG 198
Query: 196 LTESARHFN 204
+ ++ +N
Sbjct: 199 VEKAMNLYN 207
>gi|402833543|ref|ZP_10882156.1| aminoacyl-tRNA hydrolase [Selenomonas sp. CM52]
gi|402280036|gb|EJU28806.1| aminoacyl-tRNA hydrolase [Selenomonas sp. CM52]
Length = 218
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y +HN VGF ++DA AE G+ A +G +G VLL KP
Sbjct: 3 IIAGLGNPGAEYARMKHN-VGFMLVDALAERLGVDAWREKFNALVAEGRIGAQKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + GPL +YKL ++V HDDM + G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNESGRAVGPLLDWYKLAPEDLIVAHDDMDIAAGTIRLRRKGSAGGHNGIKSLLAHI 121
Query: 140 RGNREFARLRIGIGRP-PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F+R+RIGIGRP PG K +L F A +I A+ + ++ +++ G+
Sbjct: 122 -GSEDFSRVRIGIGRPLPGWTVVK-HVLAPFPAEDVLKIQEAISYLLPAVECIVTDGIDM 179
Query: 199 SARHFNTIQK 208
+ +N +K
Sbjct: 180 AMNRYNPRRK 189
>gi|363900456|ref|ZP_09326961.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB1]
gi|395208890|ref|ZP_10398055.1| aminoacyl-tRNA hydrolase [Oribacterium sp. ACB8]
gi|361956330|gb|EHL09648.1| peptidyl-tRNA hydrolase [Oribacterium sp. ACB1]
gi|394705491|gb|EJF13017.1| aminoacyl-tRNA hydrolase [Oribacterium sp. ACB8]
Length = 189
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAF-AESQGISMNTVHCKATFGQGFVGDAPVLLA 77
WL GLGNP KY GTRHN GF IDA E G + + F + +G V++
Sbjct: 2 WLIAGLGNPERKYDGTRHN-AGFAAIDALLDELGGKGLESTKFHGAFTKLRIGAEEVIIL 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP TYMNLSG+S P+A +YK+P +VLV D++ L G +R+R G GGHNGLKS++
Sbjct: 61 KPLTYMNLSGDSIAPMANFYKIPAEQVLVISDEISLSPGSIRIRKKGSAGGHNGLKSIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F R+R+G+G D A +L F+ +R++ A E + +++G+
Sbjct: 121 RL-GTEDFPRIRLGVGDKDENRDLAAHVLGHFSKEEEKRMEEAYAEVAKACICTVTEGIE 179
Query: 198 ESARHFN 204
++ +N
Sbjct: 180 KAMNLYN 186
>gi|313884481|ref|ZP_07818242.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620265|gb|EFR31693.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
Length = 186
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG+KY+ TRHN VGF +ID F + G++M +A + VLL KP
Sbjct: 3 LFVGLGNPGEKYEATRHN-VGFAVIDQFMQDHGLAMTKQKFRADYEIWHSPKEKVLLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGE+ P+ +YY + + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 FTYMNASGEAVLPIMSYYGIGMEDLVVVYDDLDLDPGRIRLRQKGSSGGHNGMKSII-SI 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL-KLLLSKGLTE 198
G+ +F R+R+GIGRP +L F+ + ID A+ + L L ++ +
Sbjct: 121 LGSDQFNRIRVGIGRPHPGWKVVDHVLAPFDKTEQVLIDQAVGQAASALTDYLDNEDFIQ 180
Query: 199 SARHFN 204
+ FN
Sbjct: 181 TMNKFN 186
>gi|153811641|ref|ZP_01964309.1| hypothetical protein RUMOBE_02033 [Ruminococcus obeum ATCC 29174]
gi|149832382|gb|EDM87467.1| aminoacyl-tRNA hydrolase [Ruminococcus obeum ATCC 29174]
Length = 192
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GF++ID E + + V A +G+G + PV+L K
Sbjct: 2 YLIVGLGNPGRQYEATRHN-MGFDVIDKLVEEYNVPQSGVKFNAMYGKGRIEGQPVILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P +YMNLSG +A Y+K+ P ++V +DD+ L G LR+R G GGHNG+K ++
Sbjct: 61 PLSYMNLSGGPVRDMANYFKIDPETEMIVIYDDIDLEPGQLRIRKKGSAGGHNGIKHIIQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G + F R+++G+G P D +L +F + R+ ++ A + + ++++L+ +
Sbjct: 121 QL-GTQTFVRIKVGVGAKPKGWDLADHVLGRFGSNERKLVEEAQERACKAVEMILADSVD 179
Query: 198 ESARHFN 204
+ FN
Sbjct: 180 AAMNQFN 186
>gi|146296228|ref|YP_001179999.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|167011991|sp|A4XIS3.1|PTH_CALS8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145409804|gb|ABP66808.1| Aminoacyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 189
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG++Y TRHN GF ID A++ ++ + K G D VLL K
Sbjct: 3 YIIAGLGNPGERYTFTRHN-AGFLAIDYLAQAFNTKVDKIKFKGLTGSFEYADKKVLLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG+S +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 62 PMTYMNSSGDSIVEAVNFYKVKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF R+RIGIG P + D ++L +F +++I A+++ + +K+LL G+
Sbjct: 122 L-GTEEFPRIRIGIGVP--KEDMVKYVLSEFEDYEKQKIFRAIEKAAQGIKILLESGIDR 178
Query: 199 SARHFN 204
+ + N
Sbjct: 179 AMNYIN 184
>gi|227497784|ref|ZP_03927970.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
gi|226832784|gb|EEH65167.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
Length = 198
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 114/196 (58%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---- 73
PWL +GLGNP +Y RHN VG +ID A G ++ +A + +G AP
Sbjct: 4 PWLIIGLGNPEARYARNRHN-VGHMVIDVLAGRAGSRLSKHKARAQVAEVRLGMAPGGAP 62
Query: 74 ---VLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
V+LA+P T+MNLSG T LA +Y + P +LV HD++ LP LRL+ GG GGH
Sbjct: 63 GPRVILAEPATFMNLSGGPTAALAKFYGIDPATNLLVIHDELDLPAHTLRLKRGGGEGGH 122
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
NGL+S+ G+R +ARLR+GIGRPPG+ DP F+L F A R +D L+ + ++
Sbjct: 123 NGLRSISQAV-GSRNYARLRVGIGRPPGRQDPADFVLSDFPARERAELDVTLELAADAVE 181
Query: 190 LLLSKGLTESARHFNT 205
++S G + + N+
Sbjct: 182 AVVSAGFEAAQQQVNS 197
>gi|407474826|ref|YP_006789226.1| peptidyl-tRNA hydrolase Pth [Clostridium acidurici 9a]
gi|407051334|gb|AFS79379.1| peptidyl-tRNA hydrolase Pth [Clostridium acidurici 9a]
Length = 186
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY GTRHN VGF++ID A + +N + K+ +G+ +G+ V+ K
Sbjct: 2 YVVVGLGNPGSKYDGTRHN-VGFDVIDILANRHNVKINKIKFKSVYGEVNLGNEKVMFVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGES ++ ++K+P+ ++V DD+ + G LR+R G G HNG+KS++
Sbjct: 61 PQTFMNRSGESVLEISNFFKVPVENIIVIVDDIDIGLGALRIRSKGSAGSHNGMKSIIYL 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ + F R++IG+G+P D F+L +FN + +D AL + + ++ L+ +G+
Sbjct: 121 LQKDN-FPRVKIGVGKPEVGRDLADFVLGRFNKEEQIIMDEALNKAADSIECLIKEGIDS 179
Query: 199 SARHFN 204
S +N
Sbjct: 180 SMNKYN 185
>gi|319934922|ref|ZP_08009367.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
gi|319810299|gb|EFW06661.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
Length = 184
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG Y+ TRHN VGF ++D ++ +S++T K + + V+L KP
Sbjct: 3 LIVGLGNPGKDYENTRHN-VGFMVMDRLSDVMNVSISTTKFKGEYVKFKYHGEDVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGES + Y+K+ + +LV +DDM +P G LRLR +G GGHNG+KS++ +
Sbjct: 62 MTYMNNSGESVRQVMDYFKIDVEDLLVVYDDMDMPVGKLRLRQSGSAGGHNGVKSIIAHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G + F R+R+GI + P ++ ++L +F + ID +++ V+ ++ L+KG +
Sbjct: 122 -GTQSFQRIRVGIDKHP-RIKVVDYVLGRFQKDEQPLIDQGVEDAVKAIETYLNKGFVAA 179
Query: 200 ARHFN 204
+N
Sbjct: 180 MNVYN 184
>gi|229551615|ref|ZP_04440340.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|258509517|ref|YP_003172268.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|258540717|ref|YP_003175216.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|385829140|ref|YP_005866912.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|385836346|ref|YP_005874121.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 8530]
gi|229315019|gb|EEN80992.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|257149444|emb|CAR88417.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|257152393|emb|CAR91365.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|259650785|dbj|BAI42947.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|355395838|gb|AER65268.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus ATCC 8530]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y GT+HN +GF ++D A+ G+++N + A V D V L KP
Sbjct: 3 MIVGLGNPGRQYAGTKHN-MGFMVVDGLAQRMGLTLNKLEFDAATATTRVHDEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + L YY++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 62 QTYMNASGRAVRQLMMYYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+ EF RL+IGI P Q ++L F + ID A+ + + L+ L+
Sbjct: 121 TGSDEFYRLKIGIQHPQRQR-VVDWVLTPFAKTDQPVIDAAITKADDALEDWLN 173
>gi|269125254|ref|YP_003298624.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
gi|268310212|gb|ACY96586.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
Length = 206
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 113/181 (62%), Gaps = 2/181 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG Y G RHN GF ++D A G +A +G + V+LAK
Sbjct: 18 WLVVGLGNPGPDYAGNRHN-AGFMVVDVLAGRMGGRFKAHKARAEVLEGRLAGRRVVLAK 76
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+++MN SG L ++K+PL R+++ HD++ +P G +RL+ GG GGHNGL+S+ +
Sbjct: 77 PRSFMNDSGGPVARLRDFFKVPLERIVIVHDELDIPYGAVRLKQGGGAGGHNGLRSISKS 136
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G ++ R+R G+GRPPG+MD AF+L+ F+A R ++ LQ + +++LL++GL
Sbjct: 137 L-GAPDYLRVRFGVGRPPGRMDAAAFVLRDFSAAERRDLELHLQVAADAVEMLLTQGLQA 195
Query: 199 S 199
+
Sbjct: 196 A 196
>gi|429193741|ref|ZP_19185885.1| aminoacyl-tRNA hydrolase [Streptomyces ipomoeae 91-03]
gi|428670549|gb|EKX69428.1| aminoacyl-tRNA hydrolase [Streptomyces ipomoeae 91-03]
Length = 198
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 111/201 (55%), Gaps = 9/201 (4%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFV 69
T PWL GLGNPG +Y RHN VGF ++D AE G +A +G +
Sbjct: 1 MTTDATVPWLIAGLGNPGPEYAMNRHN-VGFMVVDLLAERIGGRFKRAGKAQAQVVEGRI 59
Query: 70 G-----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNG 124
G + V+LAKP +YMNLSG L +YK+P+ ++ HD++ + G LRL+ G
Sbjct: 60 GPPGPGNRRVILAKPMSYMNLSGGPVNALRDFYKVPVANIVAIHDELDIDYGTLRLKLGG 119
Query: 125 GHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEG 184
G GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 120 GDNGHNGLKSMTKAM--GSDYHRVRFGIGRPPGRMPVADFVLKDFSSAERKELDYFVDRA 177
Query: 185 VEVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 178 ADAVECLVIEGLERAQGTYNS 198
>gi|158522829|ref|YP_001530699.1| aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
gi|158511655|gb|ABW68622.1| Aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
Length = 193
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 104/184 (56%), Gaps = 2/184 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
P+L GLGNPG Y TRHN +GF +ID AE +++ +G G + V+
Sbjct: 4 TEPYLLAGLGNPGSDYARTRHN-IGFMVIDRLAERFSFAIDRTKGSCLYGTGGIEGQRVV 62
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
KPQ +MN SG LA Y K+ R+LV HDD+ L G L+++ GGHGGHNG+KS+
Sbjct: 63 AVKPQGFMNSSGPPLFRLAQYLKISSKRMLVVHDDIDLAFGKLKIKTKGGHGGHNGIKSI 122
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
++ F G +F R+RIGI P + +L +F+A E +D +Q+ E + +L +G
Sbjct: 123 IDTF-GTDDFVRVRIGIDHPGAREGVVGHVLGRFSAEELEHLDGLIQQAGETVTAILKEG 181
Query: 196 LTES 199
T +
Sbjct: 182 ATAA 185
>gi|430751827|ref|YP_007214735.1| peptidyl-tRNA hydrolase [Thermobacillus composti KWC4]
gi|430735792|gb|AGA59737.1| peptidyl-tRNA hydrolase [Thermobacillus composti KWC4]
Length = 186
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG Y+ TRHN VGF +ID A IS+ KA G+G V V L K
Sbjct: 3 WI-VGLGNPGPAYQSTRHN-VGFMVIDELARRWNISVTQSKFKALVGEGHVKGEKVHLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES +YK + ++V +DD+ P G +RLR+ G GGHNG++S++ +
Sbjct: 61 PMTYMNLSGESLRAFLDFYKADIADLIVVYDDLDTPLGKIRLRYQGSSGGHNGVRSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G ++F R+R+GI RP + ++L F+ E++ T + + ++ L +
Sbjct: 121 L-GTQQFNRIRMGISRPAPGREIVDYVLSPFDKAEAEQLKTMIAAACDAVEYALEHPFEK 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 AMAKFN 185
>gi|227504130|ref|ZP_03934179.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199262|gb|EEI79310.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 198
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAF-AESQGISMNTVHCKATFGQGFVGDAPVLLA 77
WL VGLGNPG KY TRHN VG+ +D AES + T V D PVL+
Sbjct: 13 WLVVGLGNPGAKYAATRHN-VGYMAVDDLLAESGELLQPVAGHSLTAAPLNVADTPVLVV 71
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+ T+MNLSG+ PLA +P RVLV HD++ LP +R++ G GHNGLKS+
Sbjct: 72 RSATFMNLSGDPIAPLAQQLGIPAERVLVIHDELDLPPNKIRIKVGGNENGHNGLKSLTE 131
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+RIGIGRPP ++L +A A D A++ + ++L++S G+
Sbjct: 132 RL-GTRDYPRVRIGIGRPPKGSSIPDYVLGPIDADA--GFDAAIETAADAVRLIVSSGIQ 188
Query: 198 ESARHFNT 205
+ ++
Sbjct: 189 SAQNEIHS 196
>gi|291286017|ref|YP_003502833.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
gi|290883177|gb|ADD66877.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
Length = 197
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG+KY TRHN +GF + D A S + K + + F+ + K
Sbjct: 1 MLIVGLGNPGEKYDRTRHN-LGFLVADKLASENSASFSK-GFKGEYAEFFMDGGKHYILK 58
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES PLAAYYK+P+ ++ HDD+ + G L+L+ G GGH G++S M
Sbjct: 59 PYTYMNLSGESVQPLAAYYKIPVEDIIAVHDDLDIEFGRLKLKKGGNDGGHKGIRS-MAQ 117
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+++F RL++GIG+ G+ D +L KF+ E++D + GV+ + + +GL
Sbjct: 118 MLGDKDFIRLKMGIGK-DGRRDTIGHVLGKFSPQESEKLDEFIDIGVKAVVCCIKEGLRP 176
Query: 199 SARHFNT 205
+ FNT
Sbjct: 177 AMNVFNT 183
>gi|223936332|ref|ZP_03628244.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
gi|223894850|gb|EEF61299.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
Length = 197
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGIS-MNTVHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF +++ AE S + A + +LL K
Sbjct: 6 LIVGLGNPGSKYALTRHN-VGFRLVECLAERWKASWVAEKKFDAMLARTERNGERILLCK 64
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGE+ G +A++Y+LPL +++V DD LP G +R+R NG GGH+GL+S+ +
Sbjct: 65 PQTFMNASGETVGAMASFYRLPLPQLVVAVDDADLPFGQIRMRANGSSGGHHGLESIEKH 124
Query: 139 FRGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G REFARLR+GIGR + + ++L F+ + +D L + ++ L G+
Sbjct: 125 L-GTREFARLRLGIGRAADDRREITDYVLAPFSGAEAKTVDKVLNTASDQIECWLDGGIQ 183
Query: 198 ESARHFN 204
++ FN
Sbjct: 184 KAMSQFN 190
>gi|225568649|ref|ZP_03777674.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
gi|225162577|gb|EEG75196.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
Length = 194
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP +Y+GTRHN VGF++ID A IS++ +A G+G + VLLAK
Sbjct: 2 FIIAGLGNPTLQYEGTRHN-VGFDVIDTVARKYNISVDYRKNRAYIGKGIIAGQKVLLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSGES L YYK+ +++LV +DD+ L G LR+R G GGHNG+KS+++
Sbjct: 61 PQTYMNLSGESIRGLVDYYKVDEESQLLVIYDDVSLGAGQLRIRKKGSAGGHNGIKSIIS 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G F R+++G+G P + D ++L F+ RE ++ E ++++++ +
Sbjct: 121 CL-GTDIFPRIKVGVGEKPKRYDLADYVLGHFSREEREMMEEGYGHAAEAVEMIVAGEID 179
Query: 198 ESARHFN 204
+ +N
Sbjct: 180 AAMNEYN 186
>gi|169335435|ref|ZP_02862628.1| hypothetical protein ANASTE_01849 [Anaerofustis stercorihominis DSM
17244]
gi|169258173|gb|EDS72139.1| aminoacyl-tRNA hydrolase [Anaerofustis stercorihominis DSM 17244]
Length = 186
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +Y TRHN +GFE +D ++ I +N KA +G+G + V L K
Sbjct: 2 YLIVGLGNIGSEYNLTRHN-IGFETVDYISDEYNIKINKTKFKADYGKGKLAGEEVFLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+TYMNLSGES Y+K+P + V +DD+ LP G LR+R NGG G HNG+KS++
Sbjct: 61 PRTYMNLSGESVKLFKDYFKIPEENIFVIYDDIELPKGKLRIRKNGGPGTHNGMKSIVKE 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R R+G+G P D ++L +F+A I + + + L K L +
Sbjct: 121 I-GTKNFPRFRMGVGSPE-HGDLVNYVLGRFSAEELPVIKDMVIMTSKAIFTALDKDLDK 178
Query: 199 SARHFN 204
+ +N
Sbjct: 179 AMNMYN 184
>gi|389580922|ref|ZP_10170949.1| peptidyl-tRNA hydrolase [Desulfobacter postgatei 2ac9]
gi|389402557|gb|EIM64779.1| peptidyl-tRNA hydrolase [Desulfobacter postgatei 2ac9]
Length = 192
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG++Y TRHN +GF+++DA A+ G +N A + +G + L KP
Sbjct: 7 LLAGLGNPGEQYSRTRHN-IGFDVVDALADRSGCRLNKEKFNAAYTGVRMGLQEIFLVKP 65
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+YMN SG LA Y+K+ + ++V HDDM LP G +++ GHGGHNG++S+++ F
Sbjct: 66 LSYMNRSGIPLQKLADYFKIDIENIIVVHDDMDLPFGKIKIVQGRGHGGHNGIRSIIDAF 125
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G + R+R+GIGRP +L K+ + +D L + + +L KG+ ++
Sbjct: 126 -GQKACVRVRVGIGRPESDRSVTGHVLGKYTPDEQACLDHVLNDACDACLAILEKGVVKA 184
Query: 200 ARHFNT 205
N+
Sbjct: 185 MNFVNS 190
>gi|292670806|ref|ZP_06604232.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
gi|422343852|ref|ZP_16424779.1| peptidyl-tRNA hydrolase [Selenomonas noxia F0398]
gi|292647427|gb|EFF65399.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
gi|355378268|gb|EHG25459.1| peptidyl-tRNA hydrolase [Selenomonas noxia F0398]
Length = 211
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 10/193 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFG----QGFVGDAPVL 75
+ GLGNPG +Y T+HN VGF ++DA A +N + F + +G V
Sbjct: 3 IIAGLGNPGAEYAKTKHN-VGFMLMDALA----AHLNAASWREAFHSLVLEVRIGGEKVF 57
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SGE+ GP+ +YYKL ++V HDDM +P G +R+R GG GGHNG+KS+
Sbjct: 58 LVKPLTYMNNSGEALGPMLSYYKLDTEDLVVAHDDMDIPAGTVRIRKKGGSGGHNGIKSI 117
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G+ FAR+RIGIGRPP +L F+A RI A+ + ++ + G
Sbjct: 118 IAHV-GSENFARVRIGIGRPPAGWSVINHVLAPFSAEDVPRIREAIDYLLPAMECIAQDG 176
Query: 196 LTESARHFNTIQK 208
+ +N +K
Sbjct: 177 TDLAMNRYNPHKK 189
>gi|188997589|ref|YP_001931840.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
gi|259535276|sp|B2V6V4.1|PTH_SULSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188932656|gb|ACD67286.1| Aminoacyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 189
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 108/185 (58%), Gaps = 5/185 (2%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGF-VGDAPVLLAKP 79
+GLGNPG+KYK TRHN VGF + D A+S ++ + + + F F D V++AKP
Sbjct: 5 IIGLGNPGEKYKNTRHN-VGFMVADLVAKS--LNCDRKYREKAFSHIFECPDYDVIIAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG + + YK+ + +LV +DD+ LP G +RLR G GGHNG+KS++N
Sbjct: 62 QTYMNLSGNAVLNILKDYKIKPSEILVVYDDLDLPLGAVRLRLKGSSGGHNGIKSIINTI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ EF RL+IGIGRP + + ++L F + +D L E + +L G+ +S
Sbjct: 122 K-TEEFPRLKIGIGRPEKKEEVSDYVLSPFTKEEKFLLDKVLAHANECILNVLKYGIEKS 180
Query: 200 ARHFN 204
N
Sbjct: 181 MNMCN 185
>gi|168334868|ref|ZP_02692990.1| peptidyl-tRNA hydrolase [Epulopiscium sp. 'N.t. morphotype B']
Length = 187
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG KY T+HN GF +D A GI+MN + G+G + +LL KP
Sbjct: 3 LVIGLGNPGAKYVATKHN-AGFYAVDYLAHYYGIAMNKNRFRGISGEGIIEGEKILLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSGES +YKL +LV +DD GV++++ G GGHNG+K+++ +
Sbjct: 62 LTFMNLSGESLIECMNFYKLTAEEILVIYDDTAFETGVIKMKRTGSAGGHNGIKNIIEHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ + F R RIGIGRPP ++L KF + E+I ++ + + ++K + +
Sbjct: 122 K-TQNFPRARIGIGRPPEGYLLVDYVLSKFTDMEIEKIKDSMPSFKDAVTTFVTKDIEAA 180
Query: 200 ARHFNTI 206
N I
Sbjct: 181 MNKLNAI 187
>gi|116333177|ref|YP_794704.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
gi|122270134|sp|Q03SZ9.1|PTH_LACBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116098524|gb|ABJ63673.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
Length = 185
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 98/170 (57%), Gaps = 3/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y TRHN GF ++DAFA+ GI++ T A FG G V VL+ KP
Sbjct: 3 MIVGLGNIGPQYDNTRHN-TGFMVVDAFAQQHGIALTTRKMDARFGSGLVNGEKVLVVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + P+ Y+K+ + V+V DDM LP G +RLR +G GGHNG+KS++ +
Sbjct: 62 TTFMNESGRAVHPIMDYFKIDVADVMVVQDDMDLPLGRIRLRDHGSAGGHNGIKSIIAHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
G + F RL++GI P Q ++L KF R + A V L
Sbjct: 122 -GTQNFGRLKVGIAHPQ-QHTVVDYVLGKFTTDQRPVFNQAADRAVAALD 169
>gi|134097415|ref|YP_001103076.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|291004595|ref|ZP_06562568.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|133910038|emb|CAM00150.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
Length = 191
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+G RHN +GF + D A G A +G +G +LAKP
Sbjct: 9 LIVGLGNPGPRYEGNRHN-IGFLVADELAARVGGKFKAHKSGAEIVEGRLGGVRAVLAKP 67
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+++MNLSG A +YK+ ++V HD++ LP G +RL+ GG GHNGL+S+ +
Sbjct: 68 RSFMNLSGGPVAGAAKFYKVQPGSLIVIHDELDLPYGTVRLKRGGGENGHNGLRSISKSL 127
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +++ R+R GI RPPG+MDP ++L+ F+ R+ + + + ++ L +GL +
Sbjct: 128 -GTKDYLRVRFGIDRPPGRMDPADYVLKDFSGAERKELAYFVDLCADAVESLAKEGLEAA 186
Query: 200 ARHFN 204
F+
Sbjct: 187 QNRFH 191
>gi|443311858|ref|ZP_21041481.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 7509]
gi|442778094|gb|ELR88364.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 7509]
Length = 211
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVG 70
+ + P L VGLGNPG KY TRHN +GF ID A + I+++ + FG+G
Sbjct: 6 ASQIVIPQLIVGLGNPGPKYDRTRHN-IGFAAIDELARAWQINLSENRKYQGEFGEGQKQ 64
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
V L KP TYMN SG+S + ++KLP VL+ +DDM LP G LRLR +G GGHN
Sbjct: 65 LNKVRLLKPLTYMNCSGQSIRAVIDWFKLPPTSVLIIYDDMDLPLGKLRLRLSGSAGGHN 124
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQM---DPK--AFLLQKFNAIARERIDTALQEGV 185
G+KS + + G + F RLRIGIG+P D K +++L +F+A + L V
Sbjct: 125 GMKSAIAHL-GLQNFPRLRIGIGKPQNAASGDDAKTISYVLGQFDAKESPIVTEVLNVVV 183
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++L L +G+ ++ +N+
Sbjct: 184 DCVELCLKQGVEQAMNRYNS 203
>gi|409992238|ref|ZP_11275440.1| peptidyl-tRNA hydrolase [Arthrospira platensis str. Paraca]
gi|291569168|dbj|BAI91440.1| peptidyl-tRNA hydrolase [Arthrospira platensis NIES-39]
gi|409936902|gb|EKN78364.1| peptidyl-tRNA hydrolase [Arthrospira platensis str. Paraca]
Length = 201
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFV-GDAPVL 75
P L VGLGNPG KY TRHN +GFE +D A+ G +++ + FG+ + +
Sbjct: 5 PQLIVGLGNPGSKYDRTRHN-IGFEAVDFLADKWGANLSENRRFQGVFGEAKMRSHNKLY 63
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG++ + +YKLP VLV +DDM LP G LRLR +G GGHNG+KS
Sbjct: 64 LLKPLTYMNRSGQAIRSVVDWYKLPPESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSA 123
Query: 136 MNNFRGNREFARLRIGIGR--PPGQMDPK---AFLLQKFNAIARERIDTALQEGVEVLKL 190
+ + G + F RLR+GI + PP + + +L KF R+ +D LQ+ +E ++L
Sbjct: 124 IAHL-GTQNFPRLRLGIDKPQPPASSSDRETISHVLGKFPPNERQTMDKLLQQVLEAIEL 182
Query: 191 LLSKGLTESARHFNT 205
L G+ ++ +N+
Sbjct: 183 ALEDGVEKAMSLYNS 197
>gi|408355419|ref|YP_006843950.1| peptidyl-tRNA hydrolase [Amphibacillus xylanus NBRC 15112]
gi|407726190|dbj|BAM46188.1| peptidyl-tRNA hydrolase [Amphibacillus xylanus NBRC 15112]
Length = 186
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY+ TRHN VGF +ID G S++ + + V+L +PQ
Sbjct: 5 IVGLGNPGRKYQKTRHN-VGFMVIDELLNRHGWSLDKKKFNGHYCLESLHGEKVVLLQPQ 63
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSG+S PL +Y++ +++LV +DD+ LP G +RLR GGHGGHNG++S++
Sbjct: 64 TYMNLSGDSVKPLLDFYQIEPSQLLVIYDDLDLPIGKVRLRQTGGHGGHNGMRSIIQTV- 122
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G ++F R+RIGI RP + ++L KF+ + ++ + + + K +
Sbjct: 123 GTKQFNRIRIGIDRPQTGITVTDYVLGKFSKAENGLVSDSISIAADACEAWMDKPFLDVM 182
Query: 201 RHFN 204
+N
Sbjct: 183 NAYN 186
>gi|392531775|ref|ZP_10278912.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum ATCC 35586]
gi|414082571|ref|YP_006991271.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum LMA28]
gi|412996147|emb|CCO09956.1| peptidyl-tRNA hydrolase [Carnobacterium maltaromaticum LMA28]
Length = 189
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY T+HN +GF +D A + N A + + F+G VLL KP
Sbjct: 3 IIVGLGNPGAKYTATKHN-IGFITMDEMAFQHKLQFNKSKFDAVYAEAFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG++ PL YY L + ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 QTFMNDSGQAVRPLMDYYDLGIEDLVVVYDDLDLPVGKIRLRQKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRP-PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLT 197
G +F R+RIGI RP PGQ +L F E I A+++ E L +
Sbjct: 122 -GTSDFNRIRIGIDRPFPGQT-VINHVLGAFPKEHHEDILFAVKDAAEALNYWIEGHTFL 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 ETMNQFN 186
>gi|418047100|ref|ZP_12685188.1| Peptidyl-tRNA hydrolase [Mycobacterium rhodesiae JS60]
gi|353192770|gb|EHB58274.1| Peptidyl-tRNA hydrolase [Mycobacterium rhodesiae JS60]
Length = 191
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 119/190 (62%), Gaps = 6/190 (3%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN +GF + D A G VH + A G +G
Sbjct: 1 MAEPLLVVGLGNPGPQYAKTRHN-LGFMVADVLAARMGGQFK-VHKRSGAEIVTGRLGHR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKP+TYMN SG GPLA +Y + ++V HD++ + G +RL+ GG GGHNGL
Sbjct: 59 PVVLAKPRTYMNESGRQVGPLAKFYSVMPTDLIVIHDELDIDFGRIRLKLGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV ++ G + F R+RIG+GRPPG+ DP A++L+ F+A R + ++ + +LL+
Sbjct: 119 RSVASSL-GTKNFQRVRIGVGRPPGRKDPAAYVLETFSAAERPEVPAICEQAADATELLI 177
Query: 193 SKGLTESARH 202
GL E+A++
Sbjct: 178 EVGL-ETAQN 186
>gi|295694756|ref|YP_003587994.1| peptidyl-tRNA hydrolase [Kyrpidia tusciae DSM 2912]
gi|295410358|gb|ADG04850.1| peptidyl-tRNA hydrolase [Kyrpidia tusciae DSM 2912]
Length = 184
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 2/181 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL GLGNPG +Y TRHN GF +ID A +S+ + + VG+ VLL K
Sbjct: 2 WLIAGLGNPGPQYAQTRHN-AGFMVIDRLAARWSVSVTSRGFHSLTASTRVGEEQVLLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SG + G +Y+L R++V +DD+ LP G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PQTFMNESGLAVGEAVRWYRLGPERLIVVYDDLDLPLGKIRLRYKGSSGGHNGMKSILQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R+RIGIGRP +L F+ + AL VE++++ + +G +
Sbjct: 121 L-GTETFGRVRIGIGRPLKGRSVIDHVLSPFSPDELSTVRPALNRAVELIEIAVQEGFEK 179
Query: 199 S 199
+
Sbjct: 180 A 180
>gi|420160718|ref|ZP_14667490.1| peptidyl-tRNA hydrolase [Weissella koreensis KCTC 3621]
gi|394746010|gb|EJF34815.1| peptidyl-tRNA hydrolase [Weissella koreensis KCTC 3621]
Length = 188
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATF-GQGFVGDAPVLLAK 78
+ VGLGN G +Y TRHN VGF IDAFA+ GI F +G++G VLL K
Sbjct: 3 MIVGLGNIGKEYDQTRHN-VGFMTIDAFAQELGIKFKQDGPHHAFVAEGWIGTDKVLLVK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ PL +YY L + +L+ DDM + G LRLR G GGHNG+KS+++
Sbjct: 62 PTTYMNLSGEAVAPLMSYYNLAIEDILIIQDDMDMELGRLRLRTKGSAGGHNGIKSIISQ 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQ 182
G + F RL+ GI P + F+L KFN +D +++
Sbjct: 122 L-GTQSFNRLKFGIAHPKHEKQAVINFVLGKFNKDDAITVDQSIE 165
>gi|335042006|ref|ZP_08535033.1| peptidyl-tRNA hydrolase [Methylophaga aminisulfidivorans MP]
gi|333788620|gb|EGL54502.1| peptidyl-tRNA hydrolase [Methylophaga aminisulfidivorans MP]
Length = 190
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 7/190 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM---NTVHCKATFGQGFVGDAPVL 75
W+ GLGNPG +Y+GTRHN VGF ++D A G++ N H + Q + V
Sbjct: 4 WIIAGLGNPGSQYEGTRHN-VGFWLLDQLARELGVNFTVQNRYHGELV--QCSLDGHKVF 60
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP T+MN SG+S PLA ++K+PL +LV HD++ L G ++L+ +GGHGGHNGL+ +
Sbjct: 61 LLKPLTFMNRSGQSVAPLANFFKIPLENILVIHDELDLSPGTVKLKRDGGHGGHNGLRDI 120
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ G ++F R R+GIG P ++L K + R++I+ A+ + +L +LS
Sbjct: 121 IAQ-TGGKQFLRCRLGIGHPGHSKLVSDYVLSKPSPTDRQQIEQAIDNVLRILPEVLSGN 179
Query: 196 LTESARHFNT 205
+ ++ ++
Sbjct: 180 MDKAMNWLHS 189
>gi|295101118|emb|CBK98663.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii L2-6]
Length = 192
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL GLGNP KY GTRHN GF +D A GIS++ + +GQG V V+L K
Sbjct: 7 WLIAGLGNPEPKYDGTRHN-TGFAALDYLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLK 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S GPLA ++K+P + V+V DD+ G LR+R +G GGHNGLKS++
Sbjct: 66 PLTYMNLSGDSIGPLAGFFKIPSDHVIVLCDDITQDPGKLRIRPSGSAGGHNGLKSIIAR 125
Query: 139 FRGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G F R+RIG+G +P D ++L KF + + + V L++ L
Sbjct: 126 L-GGENFPRIRIGVGAKPRPDYDLADWVLGKFPPDDAKALADRCPDIAAVATLIMDGKLG 184
Query: 198 ESARHFN 204
+ +N
Sbjct: 185 LAQSKYN 191
>gi|29830107|ref|NP_824741.1| peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
gi|46576777|sp|Q82HE5.1|PTH_STRAW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29607217|dbj|BAC71276.1| putative peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
Length = 203
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG-----D 71
PWL VGLGNPG +Y RHN VGF + D AE G +A +G +G +
Sbjct: 13 PWLIVGLGNPGPEYARNRHN-VGFMVADLLAERIGGKFKRAGKAQAQVIEGRIGPPGPAN 71
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP +YMNLSG L +YK+P+ ++ HD++ + GVLRL+ GG GHNG
Sbjct: 72 RRVILAKPMSYMNLSGGPVNALREFYKVPVANIVAVHDELDIDYGVLRLKLGGGDNGHNG 131
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F + R+ +D + + + L
Sbjct: 132 LKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYLVDRAADAAECL 189
Query: 192 LSKGLTESARHFNT 205
+ +GL + +N+
Sbjct: 190 VIEGLERAQGTYNS 203
>gi|54026867|ref|YP_121109.1| peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
gi|68052906|sp|Q5YPZ6.1|PTH_NOCFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54018375|dbj|BAD59745.1| putative peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
Length = 193
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVL 75
P L VGLGNPG +Y+ TRHN VGF + D AE G VH K A Q + VL
Sbjct: 8 PALVVGLGNPGSEYERTRHN-VGFLVADVLAERVGDRF-AVHKKSGADLLQARLDGRQVL 65
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+AKP++YMNLSG LA ++ +P V+V HD++ LP G +RL+ GG GGHNGL+S+
Sbjct: 66 IAKPRSYMNLSGRPVAALARFFSVPPTEVIVVHDELDLPFGAVRLKRGGGEGGHNGLRSI 125
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ +++ R RIGIGRPPG+ DP F+L+ F A R+ + +++ + ++LLL G
Sbjct: 126 SSAL-TTKDYLRTRIGIGRPPGRQDPADFVLKPFAAAERKEVPVIVEQAADAVELLLRVG 184
Query: 196 L 196
L
Sbjct: 185 L 185
>gi|91204544|emb|CAJ70772.1| similar to peptidyl-tRNA hydrolase [Candidatus Kuenenia
stuttgartiensis]
Length = 186
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 108/187 (57%), Gaps = 7/187 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
+ VGLGNPG+KY TRHN +GF +ID F SQ + M V K + F + V ++L
Sbjct: 5 MIVGLGNPGEKYLRTRHN-LGFMVIDEF--SQQLEMGGVQHKFQSLFCKKEVEHEEIILL 61
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQT+MNLSG + +A YK V+V DD+ LP G LR+R +GG GGH GL+SV +
Sbjct: 62 KPQTFMNLSGIAVQEVANMYKCQPRDVMVVCDDLDLPLGKLRIRRSGGCGGHRGLESVAS 121
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G +F RLRIGIGRP D F+L F+A I +LQE + LK + KG+
Sbjct: 122 SL-GTADFPRLRIGIGRPKFN-DTSRFVLSMFSAEEDVEIAKSLQEACKALKTWVYKGIE 179
Query: 198 ESARHFN 204
N
Sbjct: 180 SCMNENN 186
>gi|404483818|ref|ZP_11019035.1| peptidyl-tRNA hydrolase [Clostridiales bacterium OBRC5-5]
gi|404343177|gb|EJZ69544.1| peptidyl-tRNA hydrolase [Clostridiales bacterium OBRC5-5]
Length = 209
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 2/190 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ +
Sbjct: 18 SKMKLIVGLGNPGREYVNTRHN-AGFYVVEKLAYELGEEISERKYKGLFAKVRIGNEKAI 76
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ +PQTYMN SGES Y+K+ V+V +DD+ L G LR+R G GGHNG+KS+
Sbjct: 77 ILEPQTYMNNSGESVRAFMDYFKIEAADVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSL 136
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G +F R+++G+G P +MD +L +F+ ++ +D A + +EV+KL++
Sbjct: 137 IAHM-GTSDFPRVKVGVGEKPARMDLADHVLGRFSDTDKKLLDEAASDAIEVIKLMVDGQ 195
Query: 196 LTESARHFNT 205
+ +NT
Sbjct: 196 YDTAMNRYNT 205
>gi|384456479|ref|YP_005669077.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|418015483|ref|ZP_12655048.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|345505818|gb|EGX28112.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984825|dbj|BAK80501.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-Yit]
Length = 191
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 108/192 (56%), Gaps = 7/192 (3%)
Query: 17 RPW----LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA 72
R W L VGLGN G +Y TRHN VGF M+D E IS++ + + +G G +
Sbjct: 3 RSWSLMFLIVGLGNIGSRYNNTRHN-VGFIMLDRICEDLNISLDNENDTSYYGTGIISGK 61
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
++ KP+T+MNLSG + + Y+K+ ++ +LV +DD+ L +R++ G HGGHNG+
Sbjct: 62 NIMCMKPKTFMNLSGSAVLEIINYFKISIDDLLVIYDDIYLDVSKIRIKQRGSHGGHNGI 121
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
K ++N ++ F R++IGIG +D ++L KF +D+ ++ +++++
Sbjct: 122 KDIINKINTDK-FKRIKIGIGENK-NIDLSNYVLSKFTYDEMRMLDSKYEDISTCIRMII 179
Query: 193 SKGLTESARHFN 204
L E+ FN
Sbjct: 180 EGKLVEAMNLFN 191
>gi|332798113|ref|YP_004459612.1| peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|438001016|ref|YP_007270759.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|332695848|gb|AEE90305.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
gi|432177810|emb|CCP24783.1| Peptidyl-tRNA hydrolase [Tepidanaerobacter acetatoxydans Re1]
Length = 189
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG +Y+ TRHN VGF +D AE + +N V K G+ +LL K
Sbjct: 2 FLIAGLGNPGKEYENTRHN-VGFMTLDVIAEKLDVKINKVKFKGLLGETVYNKEKILLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG+S +YK+ L +++V +DDM LP G LR++ GG GGH G+ S++
Sbjct: 61 PLTFMNLSGQSVADALNFYKISLEQLIVIYDDMDLPVGRLRIKPEGGSGGHRGMDSIIYQ 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKF 169
++ R+RIGIGRP Q DP +L +F
Sbjct: 121 LASDK-ICRIRIGIGRPDEQKDPVGHVLGRF 150
>gi|383827088|ref|ZP_09982203.1| peptidyl-tRNA hydrolase [Mycobacterium xenopi RIVM700367]
gi|383331666|gb|EID10162.1| peptidyl-tRNA hydrolase [Mycobacterium xenopi RIVM700367]
Length = 191
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 112/188 (59%), Gaps = 7/188 (3%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT---VHCKATFGQGFVGD 71
+A P L VGLGNPG Y TRHN +G+ + D A G + C+ GQ +G
Sbjct: 1 MAEPLLAVGLGNPGPNYARTRHN-LGYMVADRLAARLGSTFKAHKKSGCEIVTGQ--LGG 57
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP++YMN SG PLA +Y +P ++V HDD+ L G +RL+ GG GGHNG
Sbjct: 58 RSVVLAKPRSYMNESGRQVAPLAKFYSVPPADIIVIHDDLDLDFGRIRLKLGGGEGGHNG 117
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
L+SV G ++F R+RIGIGRPPG+ DP AF+L+ F A R + T ++ + +LL
Sbjct: 118 LRSVAAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTAAERAEVPTICEQAADATELL 176
Query: 192 LSKGLTES 199
+ GL +
Sbjct: 177 IELGLEAA 184
>gi|300857301|ref|YP_003782285.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
gi|300437416|gb|ADK17183.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
Length = 191
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 118/189 (62%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G KY+ TRHN +GF+ +D + I +N K T+G+G + D V+L K
Sbjct: 2 FLIVGLGNIGTKYQHTRHN-IGFDAVDLISSKYNIPINREKFKGTYGEGIIADNKVMLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A ++K+ + +++ +DD+ L G +R+R +G GGHNG+KSV+ N
Sbjct: 61 PSTYMNLSGESVIEAANFFKIKSSNIIIIYDDIDLEIGRIRIRKHGSAGGHNGIKSVIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R+++GIG+P G D + +L KF+ R I+ L+ +VL+ L++ G+ E
Sbjct: 121 L-GTDVFPRIKVGIGQPKG--DLVSHVLGKFDINERNDIEKVLETSADVLECLINCGVEE 177
Query: 199 SARHFNTIQ 207
+ FN ++
Sbjct: 178 AMNKFNGLK 186
>gi|227509304|ref|ZP_03939353.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227191234|gb|EEI71301.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 189
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y GTRHN GF +++ FA+ GIS+ T A G FV VL+ +P
Sbjct: 6 MIVGLGNIGPQYDGTRHN-TGFMVVEEFAKKHGISIKTRKMNAKMGSAFVNGQKVLVVEP 64
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + PL +Y+++ V+V HDDM LP G +R++ G GGHNG+KS++NN
Sbjct: 65 TTFMNDSGIAVKPLMSYFEIENKDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNL 124
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G F+R+R+GI P ++L +F+ A V L+ L
Sbjct: 125 -GTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|440681983|ref|YP_007156778.1| peptidyl-tRNA hydrolase [Anabaena cylindrica PCC 7122]
gi|428679102|gb|AFZ57868.1| peptidyl-tRNA hydrolase [Anabaena cylindrica PCC 7122]
Length = 214
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 114/199 (57%), Gaps = 9/199 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GD 71
A+ P L VGLGNP KY TRHN +GF +DA A + I + + +FG+G G
Sbjct: 9 ALVIPQLIVGLGNPEPKYDQTRHN-IGFAAVDALARAWQIPLAENRKFQGSFGEGIAPGG 67
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V L KP TYMN SG+S + ++YKLP VL+ +DDM LP G RLR +G GGHNG
Sbjct: 68 GKVRLLKPLTYMNRSGQSIQAVTSWYKLPPESVLIIYDDMDLPLGKTRLRLSGSAGGHNG 127
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVE 186
+KS +++ ++ F RLRIGIG+P G D + +L +F+A + + L VE
Sbjct: 128 MKSTISHL-SSQNFPRLRIGIGKPKGVGDDDNSETVSHVLGRFSAAENKLMSLVLDFVVE 186
Query: 187 VLKLLLSKGLTESARHFNT 205
++L +G+ ++ N+
Sbjct: 187 CVELSFKQGVEKAMNRCNS 205
>gi|416381169|ref|ZP_11684175.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 0003]
gi|357265569|gb|EHJ14318.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 0003]
Length = 204
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVL 75
P L VGLGNP KY TRHN +GFE++D AE+ +S T + +G +
Sbjct: 12 PQLIVGLGNPEPKYDKTRHN-IGFEIVDILAETWQLSWKETRRFQGMIAEGNSRNQQKIY 70
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG+S + +YKL VLV +DDM LP G LR+R +G GGHNG+KS+
Sbjct: 71 LLKPSTYMNRSGQSVRAVTDWYKLESENVLVIYDDMDLPIGRLRMRLSGSAGGHNGMKSI 130
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+++ G + F RLRIGIG+ + + +L +F+ R+ ID V+ ++ L +G
Sbjct: 131 ISHL-GGQNFPRLRIGIGKSNQVDNTISHVLGRFSPEERKIIDKTYPLVVDAIETTLKEG 189
Query: 196 LTESARHFNT 205
+ ++ FN+
Sbjct: 190 VEKAMSQFNS 199
>gi|317120948|ref|YP_004100951.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
gi|315590928|gb|ADU50224.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
Length = 220
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
P + VGLGNPG +Y+GTRHN VGF ++DA A + + + +G PV L
Sbjct: 2 PRIIVGLGNPGPEYEGTRHN-VGFAVVDALARRLRTAGWRRGFASLWAEGSWRGQPVALL 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGE+ +++P VLV +DD+ LP G LRLR G GGH G+ S++
Sbjct: 61 KPQTYMNASGEAVQQACRAWRVPPAEVLVVYDDLDLPPGHLRLRPRGSAGGHRGVASIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F RLRIGIGRPP +D ++L F+ + ++ A+Q E + +L+ GL
Sbjct: 121 AL-GGEDFPRLRIGIGRPPAGVDAAEYVLAPFDPAEQPLMEAAVQRAAEAVLAVLATGLQ 179
Query: 198 ESARHFN 204
+ +N
Sbjct: 180 LAMSRYN 186
>gi|306835688|ref|ZP_07468694.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
gi|304568406|gb|EFM43965.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
Length = 177
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 106/178 (59%), Gaps = 5/178 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVL 75
P L VGLGNPG KY GTRHN +GF++ D A + +S +VH K +G + V+
Sbjct: 3 PLLVVGLGNPGPKYSGTRHN-IGFDVADELA-GELMSSFSVHKKTNTEVAEGMLSGRKVI 60
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
AKP+++MNLSG LA Y+ L ++V HD++ L G ++LR GG GHNGL+S
Sbjct: 61 CAKPRSFMNLSGGPIKALAQYFHLTPADIVVVHDELELDFGTVKLRQGGGDHGHNGLRST 120
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
+ G +++ RL IGIGRPPG+MDP +F+L+ ++ + I + V ++ L
Sbjct: 121 TKSL-GTKDYQRLSIGIGRPPGRMDPASFVLKPWSKQEKVEIPILCADAVAEIRSALD 177
>gi|365133371|ref|ZP_09342706.1| peptidyl-tRNA hydrolase [Subdoligranulum sp. 4_3_54A2FAA]
gi|363615647|gb|EHL67106.1| peptidyl-tRNA hydrolase [Subdoligranulum sp. 4_3_54A2FAA]
Length = 195
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 4/186 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+GTRHN GF +D AE G+ + A G G VLL KP
Sbjct: 12 IIVGLGNPGKKYEGTRHN-AGFAALDHVAEKWGVRVTKAKFDALTGTGTAAGVKVLLMKP 70
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG++ A +YK+P R++V DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 71 QTFMNLSGDAVRKAADFYKVPPERIIVLFDDISLAPGRLRIRKTGSAGGHNGIKSIIGNI 130
Query: 140 RGNREFARLRIGIG-RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
++F R++IG+G +P + D ++L + ++ ++ + L+L++
Sbjct: 131 --GQDFPRVKIGVGEKPRPEYDLADWVLSRLTQAEKKAVEARYDDICGALELMMKGQFDT 188
Query: 199 SARHFN 204
+ +N
Sbjct: 189 AMSRYN 194
>gi|303324919|pdb|3KJZ|A Chain A, Crystal Structure Of Native Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis
gi|311772055|pdb|3KK0|A Chain A, Crystal Structure Of Partially Folded Intermediate State
Of Peptidyl- Trna Hydrolase From Mycobacterium Smegmatis
gi|312208144|pdb|3P2J|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis At 2.2 A Resolution
Length = 191
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN +GF + D A G S VH K A G +
Sbjct: 1 MAEPLLVVGLGNPGPTYAKTRHN-LGFMVADVLAGRIG-SAFKVHKKSGAEVVTGRLAGT 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ MN SG GPLA +Y +P +++V HD++ + G +RL+ GG GGHNGL
Sbjct: 59 TVVLAKPRISMNESGRQVGPLAKFYSVPPQQIVVIHDELDIDFGRIRLKLGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + G + F R+RIG+GRPPG+ DP AF+L+ F + R + T +++ + +LL+
Sbjct: 119 RSVASAL-GTKNFHRVRIGVGRPPGRKDPAAFVLENFTSAERAEVPTIVEQAADATELLI 177
Query: 193 SKGLTESARHFNTIQKY 209
++GL E A+ NT+ +
Sbjct: 178 AQGL-EPAQ--NTVHAW 191
>gi|333989611|ref|YP_004522225.1| peptidyl-tRNA hydrolase Pth [Mycobacterium sp. JDM601]
gi|333485579|gb|AEF34971.1| peptidyl-tRNA hydrolase Pth [Mycobacterium sp. JDM601]
Length = 194
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 113/185 (61%), Gaps = 5/185 (2%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGD 71
A + P L VGLGNPG Y TRHN VGF ++D AE G S +H K A G +
Sbjct: 2 AESPPVLVVGLGNPGPTYARTRHN-VGFMVVDLLAERIG-SGFKLHKKSGADVATGRLSG 59
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LA+P+ YMN SG PLA +Y +P V+V HDD+ L G +RL+ GG GGHNG
Sbjct: 60 RAVVLARPRCYMNESGRQVWPLAKFYSVPPAGVVVIHDDLDLDFGRIRLKQGGGEGGHNG 119
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
L+S+ G+++F R+R GIGRPPG+ DP AF+LQ F + RE + T ++ + +LL
Sbjct: 120 LRSIATVL-GSKDFQRVRWGIGRPPGRQDPAAFVLQAFGSREREEVPTICEQAADATELL 178
Query: 192 LSKGL 196
+ GL
Sbjct: 179 IELGL 183
>gi|429736222|ref|ZP_19270137.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429155820|gb|EKX98469.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 209
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 107/193 (55%), Gaps = 10/193 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGF----VGDAPVL 75
+ GLGNPG +Y T+HN VGF ++DA AE +N K F +G V
Sbjct: 3 MIAGLGNPGAEYAQTKHN-VGFMLVDALAER----LNAPAWKEDFFSAVTEVRIGGEKVF 57
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SGE+ GP+ +YYK+ + + V HDDM +P G +R+R G GGHNG+KS+
Sbjct: 58 LVKPLTYMNNSGEAIGPMLSYYKMAADDLTVVHDDMDIPAGTVRIRKKGSSGGHNGIKSI 117
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G FAR+RIGIGRPP +L F A +I A+ + ++ +++ G
Sbjct: 118 IAHV-GGENFARVRIGIGRPPAGWTVINHVLSPFLAEDVPKIREAISYLLPAVECIVTDG 176
Query: 196 LTESARHFNTIQK 208
+ +N +K
Sbjct: 177 VDLVMNRYNPHKK 189
>gi|68536581|ref|YP_251286.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|68264180|emb|CAI37668.1| pthA [Corynebacterium jeikeium K411]
Length = 209
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 106/177 (59%), Gaps = 18/177 (10%)
Query: 7 LRRGFCTAVARP----------WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQ--GIS 54
L RG T VA P WL VGLGNPGDKY TRHN VG +I + Q S
Sbjct: 10 LERGLET-VASPNKKQHTNSDTWLIVGLGNPGDKYANTRHN-VGRMVIGELLDRQVPAAS 67
Query: 55 MNTVHCKAT--FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMG 112
+NT H K + + V+LA+P+T+MN+SG LAA++K+P ++V +DD+
Sbjct: 68 LNT-HKKTNTDIAEVKIAGRKVVLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLE 126
Query: 113 LPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 169
G ++LR +GG GHNGLKS+ + G +++ RL GIGRPPG+MDP A++L+ F
Sbjct: 127 GDPGAVKLRQSGGDKGHNGLKSITKSL-GTKDYWRLSCGIGRPPGRMDPAAYVLKPF 182
>gi|377571476|ref|ZP_09800594.1| peptidyl-tRNA hydrolase [Gordonia terrae NBRC 100016]
gi|377531306|dbj|GAB45759.1| peptidyl-tRNA hydrolase [Gordonia terrae NBRC 100016]
Length = 188
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 121/192 (63%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
+ VGLGNPG KY+ TRHN VG + D S G VH K A + +G VL+A
Sbjct: 3 IIVGLGNPGSKYEKTRHN-VGAMVADGLVASAGERWK-VHKKSGAEVAEVRLGGQSVLVA 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+TYMN SG GPLA +Y + ++ ++V HD++ + G +RL+ GG GGHNGL+S+ +
Sbjct: 61 KPRTYMNESGRQIGPLAKFYSVTVDDLIVVHDELDIDFGAVRLKRGGGEGGHNGLRSI-S 119
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+RIGIGRPPG+ DP F+L+ F + AR ++ + G + ++LLL + L
Sbjct: 120 QVLGTRDYLRVRIGIGRPPGRQDPADFVLKPFPSSARNEVELLIANGCDAVELLLGQDL- 178
Query: 198 ESARHFNTIQKY 209
ESA+ NT+ +
Sbjct: 179 ESAQ--NTVHAW 188
>gi|407275963|ref|ZP_11104433.1| peptidyl-tRNA hydrolase [Rhodococcus sp. P14]
Length = 190
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 109/181 (60%), Gaps = 3/181 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG +Y+ TRHN +GF + D A G + A Q + V++AK
Sbjct: 7 LVVGLGNPGPQYEKTRHN-IGFMVADTLAARVGGKFSAHKRSNAEIVQARLDGRQVIIAK 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+T+MNLSG LA ++ + ++V HD++ L G +RL+ GG GHNGL+S+ +
Sbjct: 66 PRTFMNLSGGPVAGLARFFSVEPADIVVVHDELDLDFGTVRLKLGGGENGHNGLRSISSA 125
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + + R R+GIGRPPG+MDP ++L+ F++ R+ +D ++ + ++LLL GL +
Sbjct: 126 L-GTKLYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLIREQAADAVELLLRVGLED 184
Query: 199 S 199
+
Sbjct: 185 A 185
>gi|258654662|ref|YP_003203818.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
gi|258557887|gb|ACV80829.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
Length = 195
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 114/182 (62%), Gaps = 2/182 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
P+L VGLGNPG +Y G RHN VG + D A G + A +G +G V+LA
Sbjct: 9 PFLVVGLGNPGKQYAGNRHN-VGAMVADVLAGRLGAGFKSHKAGADVVEGRLGARRVILA 67
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP++YMNLSG +T LA ++ + RV+ HD++ LP +R++ GG GGHNGL+S+
Sbjct: 68 KPRSYMNLSGGATAALAKFFSVVPARVIAVHDELDLPPSTIRVKQGGGEGGHNGLRSISA 127
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G +++ R+R GIGRPPG+MDP F+L+ F+A R+ + L+ + ++LL+ +GL
Sbjct: 128 SL-GTKDYLRVRFGIGRPPGRMDPADFVLRDFSAAERKDLGVDLEHAADAVELLVEQGLE 186
Query: 198 ES 199
+
Sbjct: 187 AT 188
>gi|300790049|ref|YP_003770340.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
gi|384153572|ref|YP_005536388.1| peptidyl-tRNA hydrolase [Amycolatopsis mediterranei S699]
gi|399541929|ref|YP_006554591.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
S699]
gi|299799563|gb|ADJ49938.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
gi|340531726|gb|AEK46931.1| peptidyl-tRNA hydrolase [Amycolatopsis mediterranei S699]
gi|398322699|gb|AFO81646.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
S699]
Length = 197
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y G RHN VGF ++D A G T +G + V+L KP
Sbjct: 13 LLAGLGNPGPQYAGNRHN-VGFMVLDELAARIGGKFKTHKSGGEVLEGRLAGRRVVLVKP 71
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
++YMNLSG A +YK+ + V+V HD++ + G L+L+ GG GHNGL+S+ +
Sbjct: 72 RSYMNLSGGPVAGAAKFYKIEPSGVVVVHDELDVDFGTLKLKFGGGDNGHNGLRSISKSL 131
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G R++ R+R GIGRPPG+ DP F+L+ F+ + R+ + + + + L+ GL +
Sbjct: 132 -GTRDYYRVRFGIGRPPGRQDPADFVLKDFSTVERKELPLEVDRCADATEALIGTGLAAA 190
Query: 200 ARHFNT 205
F+
Sbjct: 191 QNSFHA 196
>gi|332711589|ref|ZP_08431520.1| peptidyl-tRNA hydrolase [Moorea producens 3L]
gi|332349567|gb|EGJ29176.1| peptidyl-tRNA hydrolase [Moorea producens 3L]
Length = 214
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 4/189 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGF-VGDAPVL 75
P L VGLGNP KY TRHN +GFE++DA A IS + + FGQG + +
Sbjct: 13 PQLIVGLGNPEPKYDKTRHN-IGFEVVDAIAGRLQISGSEHRRFQGWFGQGIGLKGNKLS 71
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG++ + +YKL VL+ +DDM LP G LRLR +G GGHNG+KS
Sbjct: 72 LLKPLTYMNRSGQAIRAVTDWYKLKPESVLIIYDDMDLPVGRLRLRLSGSAGGHNGMKSA 131
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G + F RLRIGIG+ + D + +L KF+ E + +Q VE ++L L +G
Sbjct: 132 IAHL-GTQNFPRLRIGIGKSSQKPDTISHVLGKFSPQEAELMSEVVQLAVEAVELSLKQG 190
Query: 196 LTESARHFN 204
+ ++ +N
Sbjct: 191 VEKAMSLYN 199
>gi|229816292|ref|ZP_04446601.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
gi|229808143|gb|EEP43936.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
Length = 209
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 9/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP------ 73
+ GLGNPG++Y TRHN GF ID AE G+S A V DA
Sbjct: 11 MVAGLGNPGEEYAATRHN-AGFCAIDVLAEKAGVSYWKNQAGAEVAVINVNDAEAEGGKR 69
Query: 74 -VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+L KPQ+YMN SG L A YK+ +LV HD++ +P G +R++ GGH GHNGL
Sbjct: 70 EVVLVKPQSYMNTSGGPISKLCAQYKVKPEELLVIHDELDIPAGDVRVKVGGGHAGHNGL 129
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+S+++ G+R+F+R+R GIG PPG+M F+L++ + E + + E L +
Sbjct: 130 RSIIDKL-GSRDFSRIRAGIGNPPGRMPVADFVLKQLRSREAEDFEVMTHQAAEAAALAV 188
Query: 193 SKGLTESARHFN 204
++G+ + H N
Sbjct: 189 TRGVVFARDHVN 200
>gi|257438136|ref|ZP_05613891.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
gi|257199467|gb|EEU97751.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
Length = 257
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 94/152 (61%), Gaps = 3/152 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL GLGNP KY GTRHN GF +D+ A GIS++ + +GQG V V+L K
Sbjct: 72 WLIAGLGNPEAKYDGTRHN-AGFAALDSLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLK 130
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S PLA ++K+P + V+V DD+ G LR+R +G GGHNGLKS++
Sbjct: 131 PLTYMNLSGDSIAPLAGFFKIPADHVIVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIAR 190
Query: 139 FRGNREFARLRIGIG-RPPGQMDPKAFLLQKF 169
G F R+RIG+G +P D ++L KF
Sbjct: 191 L-GGENFPRIRIGVGAKPRPDYDLADWVLGKF 221
>gi|331003612|ref|ZP_08327108.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412332|gb|EGG91724.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 211
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 109/190 (57%), Gaps = 2/190 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ +
Sbjct: 20 SKMKLIVGLGNPGREYVNTRHN-AGFYVVEKLAYELGEDISERKYKGVFTRVRIGNEKAI 78
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ +P TYMN SGES Y+K+ + V+V +DD+ L G LR+R G GGHNG+KS+
Sbjct: 79 ILEPLTYMNNSGESVRAFMDYFKIDASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSL 138
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G +F R+++G+G P +MD +L +FN ++ +D A + +E +KL++
Sbjct: 139 IAHM-GTSDFPRIKVGVGEKPAKMDLADHVLGRFNDTDKKLLDEAASDAIEAIKLMVEDQ 197
Query: 196 LTESARHFNT 205
+ +NT
Sbjct: 198 YDTAMNRYNT 207
>gi|310639512|ref|YP_003944270.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
gi|386038726|ref|YP_005957680.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa M1]
gi|309244462|gb|ADO54029.1| Peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
gi|343094764|emb|CCC82973.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa M1]
Length = 186
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
W+ VGLGNPG +Y+ TRHN VGF +DA A I + CKA G+G +G +L K
Sbjct: 3 WI-VGLGNPGPQYEKTRHN-VGFMALDALALRHNIQITQSKCKALIGEGHIGGVKTVLIK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES YYK + ++V +DD+ G +RLR+ G GGHNG+KS++ +
Sbjct: 61 PMTYMNLSGESLRAYMDYYKADMEDLIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G + F R+R+GI RP ++L F +E + +++ L+ L+
Sbjct: 121 -TGTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKELLTGMIEDTCNALEYSLNHPFER 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 TMAEFN 185
>gi|408531356|emb|CCK29530.1| Peptidyl-tRNA hydrolase [Streptomyces davawensis JCM 4913]
Length = 198
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG-----D 71
PWL VGLGNPG +Y RHN VGF ++D AE G +A +G +G +
Sbjct: 8 PWLIVGLGNPGPEYAMNRHN-VGFMVVDLLAERIGGRFKRAGKAQAQVVEGRIGPPGPMN 66
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP ++MNLSG L +YK+P+ ++ HD++ + G LRL+ GG GHNG
Sbjct: 67 RRVILAKPMSFMNLSGGPVNALKDFYKVPVANIVAIHDELDIDHGTLRLKLGGGDNGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F+ R+ +D + + ++ L
Sbjct: 127 LKSMTKAM--GSDYHRVRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVECL 184
Query: 192 LSKGLTESARHFNT 205
+ +GL + +N+
Sbjct: 185 VIEGLERAQGTYNS 198
>gi|172036669|ref|YP_001803170.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
gi|354554483|ref|ZP_08973787.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51472]
gi|171698123|gb|ACB51104.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
gi|353553292|gb|EHC22684.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51472]
Length = 204
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 117/195 (60%), Gaps = 14/195 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L VGLGNP KY TRHN +GFE++D AE+ G+S + QG + G++P
Sbjct: 12 PKLIVGLGNPEPKYDKTRHN-IGFEIVDILAETWGLSWK----ENRRFQGLIAEGNSPTY 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KP TYMN SG+S + +YKL VLV +DDM LP G +R+R +G GGHNG
Sbjct: 67 QKIYLLKPLTYMNRSGQSVRAVTDWYKLIATDVLVIYDDMDLPIGRMRMRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPK-AFLLQKFNAIARERIDTALQEGVEVLKL 190
+KS++++ G + F RLRIGIG+ GQ+D + +L +F R+ +D V+ ++
Sbjct: 127 MKSIISHL-GEQNFPRLRIGIGK-SGQLDNTVSHVLGRFAPEERKIVDKTFPLVVDAIET 184
Query: 191 LLSKGLTESARHFNT 205
L +G+ ++ FN+
Sbjct: 185 SLKEGIEKAMSLFNS 199
>gi|414075566|ref|YP_006994884.1| peptidyl-tRNA hydrolase [Anabaena sp. 90]
gi|413968982|gb|AFW93071.1| peptidyl-tRNA hydrolase [Anabaena sp. 90]
Length = 213
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 9/194 (4%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQG-FVG 70
TAV P L VGLGNP KY TRHN +GF ID A + IS+ + FG+G G
Sbjct: 9 TAVVIPQLIVGLGNPEPKYDQTRHN-IGFAAIDTLARAWQISLAENRKFQGEFGEGNAAG 67
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
+ L KP TYMNLSG++ + +YK+P +L+ +DD+ LP G RLR +G GGHN
Sbjct: 68 KGKIRLLKPLTYMNLSGQAIQAVTNWYKIPPESILIIYDDLDLPLGKTRLRLSGSAGGHN 127
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMD-----PKAFLLQKFNAIARERIDTALQEGV 185
G+KS++++ + F RLRIGIG+P +D + +L +F+A + + L V
Sbjct: 128 GMKSIISHLN-TQNFPRLRIGIGKPKNAIDGDNSHTVSHVLGRFSATENKVMSQVLNFVV 186
Query: 186 EVLKLLLSKGLTES 199
E ++ +G+ +S
Sbjct: 187 ECVEFSFKQGIEKS 200
>gi|358067113|ref|ZP_09153597.1| peptidyl-tRNA hydrolase [Johnsonella ignava ATCC 51276]
gi|356694755|gb|EHI56412.1| peptidyl-tRNA hydrolase [Johnsonella ignava ATCC 51276]
Length = 195
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 107/189 (56%), Gaps = 6/189 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN GF+ ID A I +N V K+ G GF+G+ VLL KP
Sbjct: 3 IIAGLGNPGRGYENTRHN-AGFDAIDRLAFKYEIPLNEVKHKSICGSGFMGNERVLLMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGE+ YYKL + ++V DD+ L G +R+R G GGHNG++S++
Sbjct: 62 QTYMNRSGEAIAKALHYYKLKPSDLIVVFDDVNLMPGQIRVRLRGSSGGHNGMRSIIYCI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
GN FAR++IGIG+ G+ ++L KF +D A V ++LL+S E+
Sbjct: 122 SGN-VFARVKIGIGKEDGKT-LSGYVLGKFTRAESVLLDEAYSNAVSAIELLIS---GEA 176
Query: 200 ARHFNTIQK 208
R N K
Sbjct: 177 DRAMNVFNK 185
>gi|433602543|ref|YP_007034912.1| Peptidyl-tRNA hydrolase [Saccharothrix espanaensis DSM 44229]
gi|407880396|emb|CCH28039.1| Peptidyl-tRNA hydrolase [Saccharothrix espanaensis DSM 44229]
Length = 189
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY+G RHN VGF ++D A G A +G +G V+LAKP
Sbjct: 7 LVVGLGNPGPKYEGNRHN-VGFLVLDELAGRIGGRFKAHKGGAEVLEGRLGGRRVVLAKP 65
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+ YMN SG A +YK+ ++V HD++ LP +R++ GG GHNGL+S+ +
Sbjct: 66 RGYMNTSGGPVAGTANFYKVEPANIVVVHDELDLPFATVRMKLGGGDNGHNGLRSITKSL 125
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +++ R+R G+ RPPG+MDP ++L+ F+ + R+ + L + ++ LL GL +
Sbjct: 126 -GTKDYHRVRFGVDRPPGRMDPADYVLRNFSLVERKELAFELDRAADAVEALLELGLEAA 184
Query: 200 ARHFN 204
F+
Sbjct: 185 QNKFH 189
>gi|153952804|ref|YP_001393569.1| peptidyl-tRNA hydrolase [Clostridium kluyveri DSM 555]
gi|219853469|ref|YP_002470591.1| hypothetical protein CKR_0126 [Clostridium kluyveri NBRC 12016]
gi|189038284|sp|A5N4J0.1|PTH_CLOK5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783863|sp|B9DY52.1|PTH_CLOK1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146345685|gb|EDK32221.1| Pth [Clostridium kluyveri DSM 555]
gi|219567193|dbj|BAH05177.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 187
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G KY TRHN +GF+ ID ++ I++N K +G+GF+G V+L K
Sbjct: 2 FLIVGLGNIGVKYHRTRHN-IGFDFIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES +YK+ +R+++ +DD+ + G R+RH G GGHNG+K+++ N
Sbjct: 61 PGTYMNLSGESVREAVNFYKIENDRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIILN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F R++IGIG P +D +++L KF+ R I+ L+ VE L+ ++ G+
Sbjct: 121 L-GTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEV 177
Query: 199 SARHFN 204
+ FN
Sbjct: 178 AMNKFN 183
>gi|302530285|ref|ZP_07282627.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
gi|302439180|gb|EFL10996.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
Length = 197
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 106/177 (59%), Gaps = 2/177 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y G RHN VGF ++D A G A +G + A V+L KP
Sbjct: 13 LLAGLGNPGPQYAGNRHN-VGFMVLDELAGRIGGKFKAHRSGAEVLEGRLAGARVVLVKP 71
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+++MNLSG A ++K+P + V+V HD++ + G L+L+ GG GHNGL+S+ +
Sbjct: 72 RSFMNLSGGPVVGAARFFKVPPSGVVVVHDELDVDFGALKLKLGGGDNGHNGLRSITKSL 131
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G R++ R+R GIGRPPG+ DP F+L+ F+ + R+ + + + + L+S+GL
Sbjct: 132 -GTRDYYRVRFGIGRPPGRQDPADFVLKDFSTVERKELPFEIDRCADATEALISRGL 187
>gi|396585884|ref|ZP_10486049.1| aminoacyl-tRNA hydrolase [Actinomyces sp. ICM47]
gi|395546512|gb|EJG14133.1| aminoacyl-tRNA hydrolase [Actinomyces sp. ICM47]
Length = 200
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 114/195 (58%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVG 70
PWL VGLGNPG +Y TRHN VG+ +D A G ++ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYASTRHN-VGYLTLDVLAARGGATLTSHRSRTHTADVRLGIGPGGVP 64
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
VLLA+ +YMN SG LA++ K+P R+LV HDDM LP LRL+ GG GGHN
Sbjct: 65 GPRVLLARSDSYMNTSGGPISALASFLKVPPARILVIHDDMDLPAHTLRLKVGGGEGGHN 124
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GLKS+ + R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++
Sbjct: 125 GLKSLTQHLH-TRDYARLRIGVGRPPGRMDPADYVLAALPSKERPDWDVTFEQAADVVED 183
Query: 191 LLSKGLTESARHFNT 205
+++KG + +T
Sbjct: 184 IVTKGFAPTQMILHT 198
>gi|253580890|ref|ZP_04858152.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847732|gb|EES75700.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 193
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GF+ +D E + V A +G+ +G V+L K
Sbjct: 2 YLVVGLGNPGKQYEATRHN-MGFDTVDRLVEDYNVPQGGVKFNAMYGKTMIGGEKVILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
P ++MNLSG +A Y+K+ P + ++V +DD+ L G LR+R G GGHNG+K ++
Sbjct: 61 PLSFMNLSGGPVREMANYFKIDPESELIVIYDDIDLEPGQLRIRKQGSAGGHNGIKDIIR 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G +F R+++G+G P D +L +F+ R+ +D A+ + + + +++S+G
Sbjct: 121 QL-GTEKFLRIKVGVGAKPKGWDLADHVLGRFSTEDRKLVDEAIAKAAKAVDIIISQGTD 179
Query: 198 ESARHFN 204
+ +N
Sbjct: 180 AAMNEYN 186
>gi|404417268|ref|ZP_10999071.1| peptidyl-tRNA hydrolase [Staphylococcus arlettae CVD059]
gi|403490366|gb|EJY95908.1| peptidyl-tRNA hydrolase [Staphylococcus arlettae CVD059]
Length = 190
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ TRHN +GFE+ID +++ K + +G V+ +P
Sbjct: 4 IVGLGNIGKRFESTRHN-IGFEVIDYMLAQHNFTLDKQKFKGAYTIERIGQEKVMFIEPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ PL YY + + ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TMMNLSGEAVAPLMDYYNIEVEDLIVLYDDLDLPQGEIRLRQKGSAGGHNGMKSIIQML- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+RIG+ RP M ++LQKF+ R +D + ++ + E++
Sbjct: 122 GTDQFKRIRIGVDRPSNGMAIVDYVLQKFSKTERVIMDKVIDHSARAVEAFI-----ETS 176
Query: 201 RHFNTIQKY 209
R N + +Y
Sbjct: 177 RFDNVMNEY 185
>gi|154507724|ref|ZP_02043366.1| hypothetical protein ACTODO_00206 [Actinomyces odontolyticus ATCC
17982]
gi|153797358|gb|EDN79778.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus ATCC 17982]
Length = 200
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 115/195 (58%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVG 70
PWL VGLGNPG +Y TRHN VG+ +D A G ++ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYAFTRHN-VGYLTLDVLASRGGATLTSHRSRTHTADVRLGIGPGGVP 64
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
V+LA+ +YMN SG LA ++K+ +R+LV HDDM LP LRL+ GG GGHN
Sbjct: 65 GPRVILARSDSYMNTSGGPISALATFHKIDPSRILVIHDDMDLPAHTLRLKVGGGEGGHN 124
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GLKS+ + G R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++
Sbjct: 125 GLKSLSQHL-GTRDYARLRIGVGRPPGRMDPADYVLATLPSKERSEWDVTFEQAADVVED 183
Query: 191 LLSKGLTESARHFNT 205
+++KG + +T
Sbjct: 184 IVTKGFAPTQMALHT 198
>gi|348025512|ref|YP_004765316.1| peptidyl-tRNA hydrolase [Megasphaera elsdenii DSM 20460]
gi|341821565|emb|CCC72489.1| peptidyl-tRNA hydrolase [Megasphaera elsdenii DSM 20460]
Length = 189
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ ++HN GF ++D A+ +++ A Q V ++L KP
Sbjct: 3 MIVGLGNPGRQYEESKHN-TGFRVVDELAKRWNVTLWQDKMDALVAQTTVNGEKIILVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GPL +YK+ V V +DDM L G LR+R NG GGHNG+KS+ N
Sbjct: 62 QTYMNESGRAVGPLMRWYKIDQPDVYVAYDDMDLAVGRLRIRKNGSDGGHNGIKSLFAN- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R R+GIGRP D +L F RE +++ ++ LS G+ +
Sbjct: 121 -GCTDFTRFRVGIGRPLPHHDVVDHVLTPFPEELREAYQQGIEDAATAIEGCLSLGVDKG 179
Query: 200 ARHFNTIQK 208
+N +K
Sbjct: 180 MNRYNPKKK 188
>gi|227522402|ref|ZP_03952451.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
gi|227090460|gb|EEI25772.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
Length = 189
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y GTRHN GF +++ FA+ GIS+ T A G FV VL+ +P
Sbjct: 6 MIVGLGNIGPQYDGTRHN-TGFMVVEEFAKKYGISIKTRKMNAKMGSAFVNGQKVLVVEP 64
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + PL +Y+++ V+V HDDM LP G +R++ G GGHNG+KS++NN
Sbjct: 65 TTFMNDSGIAVKPLMSYFEIENKDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNL 124
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G F+R+R+GI P ++L +F+ A V L+ L
Sbjct: 125 -GTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|434405779|ref|YP_007148664.1| peptidyl-tRNA hydrolase [Cylindrospermum stagnale PCC 7417]
gi|428260034|gb|AFZ25984.1| peptidyl-tRNA hydrolase [Cylindrospermum stagnale PCC 7417]
Length = 213
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 114/199 (57%), Gaps = 9/199 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GD 71
A+ P L VGLGNP KY TRHN +GF +DA + S + + + +G+G G
Sbjct: 9 ALVIPQLIVGLGNPEPKYDQTRHN-IGFAALDALSRSWKMPLAENRKFQGEYGEGMAPGG 67
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V L KP TYMN SG+S + ++YKLP VLV +DDM LP G RLR +G GGHNG
Sbjct: 68 GKVRLLKPLTYMNRSGQSIQAVTSWYKLPAESVLVIYDDMDLPLGKTRLRLSGSAGGHNG 127
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPK-----AFLLQKFNAIARERIDTALQEGVE 186
+KS + + +++F RLRIGIG+P G + + +L +F+ + + LQ VE
Sbjct: 128 MKSTIAHL-SSQDFPRLRIGIGKPKGAANSDDSETVSHVLGRFSGAETKLMSLVLQFVVE 186
Query: 187 VLKLLLSKGLTESARHFNT 205
++L L +G+ ++ N+
Sbjct: 187 CVELSLKQGVEKAMNRCNS 205
>gi|421077189|ref|ZP_15538160.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans JBW45]
gi|392524577|gb|EIW47732.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans JBW45]
Length = 185
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN +GF ++D A+ GI +A + + G+ +LL KP
Sbjct: 3 IVVGLGNPGQQYSATRHN-IGFMVVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG + G LA +YK+P+ +++ DDM LP G LRLR GG GGH G++S++ +
Sbjct: 61 QTYMNLSGVAVGELARWYKVPVEDIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ F R+R+GIGRPP ++L F A + + A+++ + + +L +G+ ++
Sbjct: 121 SKD-SFPRVRVGIGRPPAGWQVVDYVLSSFTAEEKSLLKAAIEKAADATESILEQGMNKA 179
>gi|149177253|ref|ZP_01855859.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
gi|148843967|gb|EDL58324.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
Length = 189
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ TRHN VGFE++ AE G + +A + G VLL P
Sbjct: 3 VVVGLGNPGKKYERTRHN-VGFEVLSQLAEWHGAPGSRSQFEAEVTEISCGGDKVLLVAP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S +A ++KLP V+V DDM LP G LRLR +G GG GL+ ++
Sbjct: 62 QTFMNLSGRSVAAVAKFFKLPATDVMVVCDDMNLPVGRLRLRGSGSAGGQKGLQDIIQKL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIAR-ERIDTALQEGVEVLKLLLSKGLTE 198
G ++ RLR+G+GRPP ++L +F E I TA+ ++ + GL
Sbjct: 122 -GTQDVPRLRVGVGRPPAGFSAADYVLGRFQGKQEFELIATAVDNAARGIECWVQSGLEM 180
Query: 199 SARHFNT 205
+ N
Sbjct: 181 AMNQVNA 187
>gi|37520107|ref|NP_923484.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
gi|46576719|sp|Q7NN75.1|PTH_GLOVI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|35211099|dbj|BAC88479.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
Length = 198
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGIS-MNTVHCKATFGQGFVGDAPVLLAK 78
LFVGLGNPG +Y TRHN GF +DA A+ S + K +G +L K
Sbjct: 5 LFVGLGNPGLQYTQTRHN-AGFLAVDALAKRWQCSWVEKSRFKGYLAEGAGPGGRAILLK 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG+S +A Y++LP ++LV +D++ LP G +RLR G GHNG+KS++ +
Sbjct: 64 PTTYMNHSGQSVRAVADYFRLPPQQLLVLYDEVALPLGKIRLRPEGSAAGHNGIKSLIEH 123
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +FARLRIGIGR P ++L KF +E++ L VE ++ +L+KGL +
Sbjct: 124 L-GTNQFARLRIGIGREPPPPVLTNYVLGKFAPEEQEQLPAILDGCVEAVEAVLAKGLEK 182
Query: 199 SARHFNT 205
+ +N
Sbjct: 183 AMSIYNA 189
>gi|225016416|ref|ZP_03705608.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
gi|224950801|gb|EEG32010.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
Length = 209
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 3/205 (1%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
L + ++ T +L VGLGNPG +Y+ TRHN GF +D AE G ++ + K
Sbjct: 7 LFKQIRQQDDATKAPIEYLIVGLGNPGKEYEFTRHN-AGFLALDQLAEKSGAAVKKIKFK 65
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
+ G+ VG LL KP TYMN SGE+ +YK+P+ VLV +DD+ L G LR+R
Sbjct: 66 SLTGEAVVGSRRCLLMKPSTYMNNSGEAVVEAMNFYKIPIENVLVLYDDISLEPGKLRIR 125
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPG-QMDPKAFLLQKFNAIARERIDTA 180
G GGHNG+KS++ G F R+++G+G+ P + D ++L F+ E ++ A
Sbjct: 126 RKGSDGGHNGIKSII-YLTGKDTFPRIKLGVGKKPDPRYDLAKWVLSAFSKEEFEAMEQA 184
Query: 181 LQEGVEVLKLLLSKGLTESARHFNT 205
E L++ + ++ +N
Sbjct: 185 FSNAGEAAALIVDGKIDQAMNLYNA 209
>gi|342733111|ref|YP_004771950.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417958990|ref|ZP_12601868.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-1]
gi|417961555|ref|ZP_12603958.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-2]
gi|417966804|ref|ZP_12608081.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-5]
gi|417968853|ref|ZP_12609830.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-co]
gi|418373370|ref|ZP_12965459.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330566|dbj|BAK57208.1| peptidyl-tRNA hydrolase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|380333028|gb|EIA23695.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-2]
gi|380334443|gb|EIA24850.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-1]
gi|380338858|gb|EIA27697.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-co]
gi|380339671|gb|EIA28372.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-5]
gi|380341206|gb|EIA29699.1| Peptidyl-tRNA hydrolase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 184
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +Y TRHN VGF M+D E IS++ + + +G G + ++ K
Sbjct: 2 FLIVGLGNIGSRYNNTRHN-VGFIMLDRICEDLNISLDNENDTSYYGTGIISGKNIMCMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+T+MNLSG + + Y+K+ ++ +LV +DD+ L +R++ G HGGHNG+K ++N
Sbjct: 61 PKTFMNLSGSAVLEIINYFKISIDDLLVIYDDIYLDVSKIRIKQRGSHGGHNGIKDIINK 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
++ F R++IGIG +D ++L KF +D+ ++ +++++ L E
Sbjct: 121 INTDK-FKRIKIGIGENK-NIDLSNYVLSKFTYDEMRMLDSKYEDISTCIRMIIEGKLVE 178
Query: 199 SARHFN 204
+ FN
Sbjct: 179 AMNLFN 184
>gi|295838327|ref|ZP_06825260.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
gi|197695880|gb|EDY42813.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
Length = 200
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVG-----D 71
PWL GLGNPG +Y G RHN VGF + D A G +A +G +G
Sbjct: 10 PWLVAGLGNPGPEYAGNRHN-VGFMVADLLAARLGGRFKRAARAQAQVVEGRLGVPGVSS 68
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V++AKP ++MNLSG L +YK+PL RV+ HD++ + GVLRL+ GG GHNG
Sbjct: 69 TRVVIAKPLSFMNLSGGPVTALRDFYKVPLERVVAVHDELDVDYGVLRLKLGGGDNGHNG 128
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ + R+R GIGRPPG+ F+L+ F++ R+ +D + + ++ L
Sbjct: 129 LKSMTKAM--GPGYHRVRFGIGRPPGRTQVADFVLRDFSSAERKELDYFVDRAADAVEAL 186
Query: 192 LSKGLTESARHFNT 205
+++GL + +N+
Sbjct: 187 VTEGLERAQGSYNS 200
>gi|67925084|ref|ZP_00518461.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
gi|67853058|gb|EAM48440.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
Length = 204
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVL 75
P L VGLGNP KY TRHN +GFE++D AE+ +S T + +G +
Sbjct: 12 PQLIVGLGNPEPKYDKTRHN-IGFEIVDILAETWQLSWKETRRFQGMIAEGNSRNQQKIY 70
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG+S + +YKL VLV +DDM LP G LR+R +G GGHNG+KS+
Sbjct: 71 LLKPSTYMNRSGQSVRAVTDWYKLKSENVLVIYDDMDLPIGRLRMRLSGSAGGHNGMKSI 130
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+++ G + F RLRIGIG+ + +L +F+ R+ ID V+ ++ L +G
Sbjct: 131 ISHL-GGQNFPRLRIGIGKSNQVDNTIPHVLGRFSPEERKIIDKTYPLVVDAIETTLKEG 189
Query: 196 LTESARHFNT 205
+ ++ FN+
Sbjct: 190 VEKAMSQFNS 199
>gi|229819487|ref|YP_002881013.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
gi|229565400|gb|ACQ79251.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
Length = 199
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 108/185 (58%), Gaps = 9/185 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---- 73
PWL VG+GNPG +Y G RHN G D A G + T +A G +G P
Sbjct: 5 PWLVVGIGNPGPQYAGNRHNA-GAMAADVLASRIGSAFTTHKARAAVVDGRLGTLPGGVP 63
Query: 74 ---VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
V++AKP TY+NLSG L+ +Y +P R+LV +D++ LP LRL+ GG GGHN
Sbjct: 64 GPRVIVAKPATYVNLSGGPVAALSTFYDIPAERLLVVYDELDLPAHTLRLKLGGGEGGHN 123
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GL+S+ G R++ RLRIGIGRPPG+ DP F+L+ F+A R + L++ + ++
Sbjct: 124 GLRSISAAL-GTRDYVRLRIGIGRPPGRQDPADFVLRDFSAAERVELGVTLEQAADAVED 182
Query: 191 LLSKG 195
++ G
Sbjct: 183 VVVHG 187
>gi|293189924|ref|ZP_06608604.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
gi|292821143|gb|EFF80090.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
Length = 200
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 115/195 (58%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVG 70
PWL VGLGNPG +Y TRHN VG+ +D A G ++ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYAFTRHN-VGYLTLDVLASRGGATLTSHRSRTHTADVRLGIGPGGVP 64
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
V+LA+ +YMN SG LA ++K+ +R+LV HDDM LP LRL+ GG GGHN
Sbjct: 65 GPRVILARSDSYMNTSGGPISALATFHKIDPSRILVIHDDMDLPAHTLRLKVGGGEGGHN 124
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GLKS+ + G R++ARLRIG+GRPPG+MDP ++L + R D ++ +V++
Sbjct: 125 GLKSLSQHL-GTRDYARLRIGVGRPPGRMDPADYVLATLPSKERPEWDVTFEQAADVVED 183
Query: 191 LLSKGLTESARHFNT 205
+++KG + +T
Sbjct: 184 IVTKGFAPTQMALHT 198
>gi|366087295|ref|ZP_09453780.1| peptidyl-tRNA hydrolase [Lactobacillus zeae KCTC 3804]
Length = 185
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY GT+HN +GF ++D A+ G+ ++ + A + D V L KP
Sbjct: 3 MIVGLGNPGRKYAGTKHN-MGFMVVDGLAKRLGLKLDKLEFDAATATTRIHDEKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + L +Y++ L+ +LV HDDM L G LRLR G GGHNG+K +++
Sbjct: 62 QTYMNASGRAVRELMMFYQIRLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISA- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+ EF RL+IGI P Q ++L F+ ++ ID A+ + L+ L+
Sbjct: 121 TGSDEFYRLKIGIQHPQRQR-VVDWVLTPFSQADQQTIDEAITRADDALEDWLN 173
>gi|365865380|ref|ZP_09405031.1| peptidyl-tRNA hydrolase [Streptomyces sp. W007]
gi|364005213|gb|EHM26302.1| peptidyl-tRNA hydrolase [Streptomyces sp. W007]
Length = 204
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 110/203 (54%), Gaps = 9/203 (4%)
Query: 9 RGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQG 67
R + PWL VGLGNPG Y RHN VGF + D A G +A +G
Sbjct: 5 RALMSDATDPWLIVGLGNPGPDYAANRHN-VGFMVADLLATRIGGKFKRAQKAQAQVLEG 63
Query: 68 FVG-----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 122
+G V+L KP +YMNLSG L +YK+P + ++ HD++ + G+LRL+
Sbjct: 64 RMGPPGPASRRVILVKPMSYMNLSGGPVTALRDFYKVPTDHIVAVHDELDVDYGMLRLKL 123
Query: 123 NGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 182
GG GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ ++ +
Sbjct: 124 GGGDNGHNGLKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELEFLVD 181
Query: 183 EGVEVLKLLLSKGLTESARHFNT 205
+ ++ LL++GL + +N+
Sbjct: 182 RSADSVECLLAEGLERAQSAYNS 204
>gi|291445313|ref|ZP_06584703.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
gi|291348260|gb|EFE75164.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
Length = 197
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----D 71
PWL VGLGNPG Y RHN VGF + D A G +A +G +G
Sbjct: 7 PWLIVGLGNPGPDYAANRHN-VGFMVADLLATRIGGKFKRAQKAQAQVVEGRIGPPGPAS 65
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+L KP +YMNLSG L +YK+P + V+V HD++ + G LRL+ GG GHNG
Sbjct: 66 RRVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVVVHDELDVDYGALRLKLGGGDNGHNG 125
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ L
Sbjct: 126 LKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECL 183
Query: 192 LSKGLTESARHFNT 205
L++GL + +N+
Sbjct: 184 LAEGLERAQSAYNS 197
>gi|302871261|ref|YP_003839897.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
gi|302574120|gb|ADL41911.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
Length = 207
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPGD+Y TRHN VGF ID A+ ++ + K G VLL K
Sbjct: 21 YIIAGLGNPGDRYTFTRHN-VGFLTIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLK 79
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SGES +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 80 PMTYMNASGESIIEAVNFYKIKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 139
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF R+RIGIG P + D ++L +F +E+I A+++ +K+LL +
Sbjct: 140 L-GTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDR 196
Query: 199 SARHFN 204
+ + N
Sbjct: 197 AMNYIN 202
>gi|119390904|sp|Q4JU39.2|PTH1_CORJK RecName: Full=Peptidyl-tRNA hydrolase 1; Short=PTH 1
Length = 193
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 99/155 (63%), Gaps = 7/155 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQ--GISMNTVHCKAT--FGQGFVGDAPV 74
WL VGLGNPGDKY TRHN VG +I + Q S+NT H K + + V
Sbjct: 15 WLIVGLGNPGDKYANTRHN-VGRMVIGELLDRQVPAASLNT-HKKTNTDIAEVKIAGRKV 72
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+LA+P+T+MN+SG LAA++K+P ++V +DD+ G ++LR +GG GHNGLKS
Sbjct: 73 VLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKS 132
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 169
+ + G +++ RL GIGRPPG+MDP A++L+ F
Sbjct: 133 ITKSL-GTKDYWRLSCGIGRPPGRMDPAAYVLKPF 166
>gi|434399577|ref|YP_007133581.1| Peptidyl-tRNA hydrolase [Stanieria cyanosphaera PCC 7437]
gi|428270674|gb|AFZ36615.1| Peptidyl-tRNA hydrolase [Stanieria cyanosphaera PCC 7437]
Length = 205
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD--AP-- 73
P L VGLGNP KY TRHN +GFE +DA A+S G++ K QG + + AP
Sbjct: 12 PQLIVGLGNPEPKYDRTRHN-IGFEAVDALADSWGLNWE----KNQRFQGLIAEGLAPNR 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KP TYMN SG++ + +YK+ VLV +DDM LP G LR+R +G GGHNG
Sbjct: 67 SKIRLLKPLTYMNRSGQAVRAVIDWYKIAPESVLVIYDDMDLPIGKLRMRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++++ G + F RLRIGIG+ G + + +L KF + + L+ ++ +
Sbjct: 127 MKSIISHL-GTQNFPRLRIGIGKSDGNKETISHVLGKFAPTETKVVTDVLELAIKAVNFS 185
Query: 192 LSKGLTESARHFN 204
L +G+ ++ +N
Sbjct: 186 LQEGVEKAMSLYN 198
>gi|375090113|ref|ZP_09736432.1| peptidyl-tRNA hydrolase [Facklamia languida CCUG 37842]
gi|374566006|gb|EHR37261.1| peptidyl-tRNA hydrolase [Facklamia languida CCUG 37842]
Length = 189
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 2/173 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG+KY+GTRHN VGFE++D Q I M +A VLL KP
Sbjct: 4 IVGLGNPGEKYQGTRHN-VGFEVVDQLLSDQKIQMTNQKFQADTAIWHTQGERVLLVKPF 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMN SG++ PL +YY + ++V +DD+ L G LRLR G GGHNG+KS++
Sbjct: 63 TYMNASGQAVLPLMSYYGVASEDLVVVYDDLDLIPGRLRLRLKGSAGGHNGMKSII-ELL 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G ++F R+R+GIGRP G + +L F+ ++ +D A+ + L+ ++
Sbjct: 122 GTQDFKRIRVGIGRPQGGWKVRDHVLAPFDRDSQPLVDDAVGRASQALQAWVA 174
>gi|336112718|ref|YP_004567485.1| peptidyl-tRNA hydrolase [Bacillus coagulans 2-6]
gi|335366148|gb|AEH52099.1| peptidyl-tRNA hydrolase [Bacillus coagulans 2-6]
Length = 185
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG +Y+ TRHN +GFE+++ AE K + V VLL KP
Sbjct: 4 IVGLGNPGAQYEHTRHN-IGFEVVNLLAERLQAPFKQSKFKGLCAETTVNGEKVLLLKPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGES YY+L +LV +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 63 TYMNLSGESVKAAMDYYRLGTGDLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSIIHHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
G +EF R+RIGIGRP + ++L +F+ R ++ A+++ + + L K
Sbjct: 122 GTQEFNRIRIGIGRPDRDIYMPDYVLGRFSKEDRVKMQLAVEKSADACEAWLEK 175
>gi|389855717|ref|YP_006357960.1| peptidyl-tRNA hydrolase [Streptococcus suis ST1]
gi|353739435|gb|AER20442.1| peptidyl-tRNA hydrolase [Streptococcus suis ST1]
Length = 189
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L +GLGNPGD+Y T+HN VGF ++D A+ + ++ N +A F+ + L K
Sbjct: 4 LIIGLGNPGDRYFETKHN-VGFMLLDKIAKRENVTFNQDKIFQADIATTFIDGEKIYLVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SG++ L YY L +LV +DD+ + G +R R G GGHNG+KS++ +
Sbjct: 63 PTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKH 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R++IGIGRP G+M +L F+ R ID AL + + + + L + +
Sbjct: 123 I-GTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFD 181
Query: 199 SA-RHFN 204
+ R FN
Sbjct: 182 TVMRKFN 188
>gi|414154399|ref|ZP_11410718.1| Peptidyl-tRNA hydrolase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454190|emb|CCO08622.1| Peptidyl-tRNA hydrolase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 203
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 104/176 (59%), Gaps = 11/176 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG Y TRHN VGF +ID+ A G ++ KA GQ +G V+LAKP
Sbjct: 3 LIVGLGNPGPAYAHTRHN-VGFMVIDSLARQLGAEVSKEQHKALVGQAVIGGTRVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L +YKL +LV DD+ LP G LR+R G GG GL++++
Sbjct: 62 QTYMNLSGQAVVALMNWYKLTPEDLLVIADDLDLPPGRLRMRKKGSDGGQKGLRNII-EL 120
Query: 140 RGNREFARLRIGIGRPP-GQMD--------PKAFLLQKFNAIARERIDTALQEGVE 186
G +EF RLR+GIGRP G ++ P+A LLQ+ A A E T + EG +
Sbjct: 121 LGTQEFTRLRLGIGRPVHGAVEYVLGKIAGPEAELLQEAVARAAEAAKTWVLEGTD 176
>gi|428300098|ref|YP_007138404.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 6303]
gi|428236642|gb|AFZ02432.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 6303]
Length = 209
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVL- 75
P L VGLGNP KY TRHN +GF IDA + I ++ + +G+G L
Sbjct: 12 PQLIVGLGNPEPKYDQTRHN-IGFAAIDALSRGWKIPLSENRKFQGDYGEGIAPSGGKLR 70
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG+S + ++YKL VLV +DDM LP G RLR +G GGHNG+KS
Sbjct: 71 LLKPMTYMNRSGQSMQAVTSWYKLAPESVLVIYDDMDLPIGKTRLRLSGSAGGHNGMKSA 130
Query: 136 MNNFRGNREFARLRIGIGRPPG----QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+ + GN +F RLRIGIG+P D + +L KFNA + ++ L +E ++L
Sbjct: 131 IAHL-GNDQFPRLRIGIGKPKNVSAEDKDTVSHVLGKFNAAETQLMEQVLTFVIECVELS 189
Query: 192 LSKGLTESARHFNT 205
+ +G+ ++ N+
Sbjct: 190 IQQGVEKAMNRCNS 203
>gi|342215023|ref|ZP_08707692.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590129|gb|EGS33378.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 780 str.
F0422]
Length = 192
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG Y+GTRHN +GF ++DA A+ + KA + VLL KP
Sbjct: 3 LIVGLGNPGRDYEGTRHN-IGFMVVDAIADGVSHTPWREDYKAELCSCTIAGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES GPL YYKL V V +DDM LP G +R+R NG GGHNG+KS++++
Sbjct: 62 QTFMNLSGESVGPLMRYYKLTPEDVYVIYDDMDLPVGKIRIRPNGSAGGHNGIKSMISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
G F R GIGRP + +L +F E+ DT +++GV+ +
Sbjct: 122 -GTDGFPHFRFGIGRPLPEWTVVDHVLSRF---PEEQQDT-VKKGVKAM 165
>gi|315606043|ref|ZP_07881074.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312325|gb|EFU60411.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 203
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-------NTVHCKATFGQGFVG 70
PWL VGLGNPG +Y TRHN VG+ +D A G S+ +T + G G V
Sbjct: 6 PWLVVGLGNPGAQYASTRHN-VGYLTLDVLASRGGASLTSHRSRTHTADVRLGVGPGGVP 64
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
V+LA+ +YMN SG LA++ K+ +R+LV HDDM LP LRL+ GG GGHN
Sbjct: 65 GPRVVLARADSYMNTSGGPIAALASFLKILPSRILVIHDDMDLPAHTLRLKVGGGEGGHN 124
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GLKS+ ++ G R++ARLRIG+GRPPG+MDP ++L A R D ++ +V++
Sbjct: 125 GLKSLSSHL-GTRDYARLRIGVGRPPGRMDPADYVLSALPAKERPDWDVTFEQASDVVED 183
Query: 191 LLSKGLTESARHFNT 205
++++G + + +T
Sbjct: 184 IVTRGFAPTQQDLHT 198
>gi|451980524|ref|ZP_21928913.1| Peptidyl-tRNA hydrolase [Nitrospina gracilis 3/211]
gi|451762260|emb|CCQ90147.1| Peptidyl-tRNA hydrolase [Nitrospina gracilis 3/211]
Length = 189
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L +GLGNPG +Y+ TRHN VGF ++D AE I +N ++ +GQG +G PV++AK
Sbjct: 2 YLILGLGNPGPQYELTRHN-VGFMVVDNLAEKHRIPLNQHKHRSLYGQGKIGGHPVVIAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG + L + +P +R++V HDD+ L G ++ + GG G G+ S M
Sbjct: 61 PMTYMNESGRAAQALLDAWNIPPHRMVVVHDDIDLVLGKIKRKFQGGDAGQKGVLSCMER 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G FAR+R+GIGRP + ++L F+ E ++ ++E VE ++ +L++ T+
Sbjct: 121 L-GTDRFARIRVGIGRPENKHQIVDYVLSPFSEGEMEPLNHMIEEAVERVEAILTEIETQ 179
Query: 199 S 199
+
Sbjct: 180 A 180
>gi|227501527|ref|ZP_03931576.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
gi|227077552|gb|EEI15515.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
Length = 177
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVL 75
P L VGLGNPG KY GTRHN +GF++ D A + +S +VH K +G + V+
Sbjct: 3 PLLVVGLGNPGPKYSGTRHN-IGFDVADELA-GELMSSFSVHKKTNTEVAEGMLSGRKVI 60
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
AKP+++MNLSG LA Y+ L ++V HD++ G ++LR GG GHNGL+S
Sbjct: 61 CAKPRSFMNLSGGPIKALAQYFHLAPADIVVVHDELEFDFGTVKLRQGGGDHGHNGLRST 120
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
+ G +++ RL IGIGRPPG+MDP +F+L+ ++ + I + V ++ L
Sbjct: 121 TKSL-GTKDYQRLSIGIGRPPGRMDPASFVLKPWSKQEKVEIPILCADAVAEIRSALD 177
>gi|113476455|ref|YP_722516.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
gi|119391035|sp|Q110N1.1|PTH_TRIEI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110167503|gb|ABG52043.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
Length = 219
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP-VL 75
P L VGLGNP KY TRHN +GF ID A +S++ K FG+G A +
Sbjct: 13 PKLIVGLGNPEPKYDQTRHN-IGFTGIDTIANIWQVSLSENRKFKGEFGEGRRPKAEKIY 71
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SGE+ + +YKLP + VL+ +DDM LP G LRLR +G GGHNG+KS
Sbjct: 72 LLKPLTYMNRSGEAISAVVNWYKLPPSCVLIIYDDMDLPMGRLRLRLSGSAGGHNGMKSA 131
Query: 136 MNNFRGNREFARLRIGIGRPP------GQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
+ + G +EF RLRIGIG+P G+ + +L KF+ + + L+ V+ ++
Sbjct: 132 IAHL-GTQEFPRLRIGIGKPKNITAERGEAKTISHVLGKFSPKENKLMTQVLELVVDAVE 190
Query: 190 LLLSKGLTESARHFN 204
L L +G+ ++ +N
Sbjct: 191 LSLKQGIEKAMSLYN 205
>gi|291439150|ref|ZP_06578540.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
gi|291342045|gb|EFE69001.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
Length = 200
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
T A PWL VGLGNPG +Y RHN VGF + D AE G +A +G +G
Sbjct: 4 TTDAAAPWLIVGLGNPGPEYAMNRHN-VGFMVADLLAERMGGRFKRAGKAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
+ V+LAKP +YMNLSG L +YK+P+ V+ HD++ + GVLRL+ GG
Sbjct: 63 PPGPANRRVVLAKPMSYMNLSGGPVNALREFYKVPVAHVVAVHDELDIGYGVLRLKLGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ F ++ R+R GIGRPPG+M F+L+ F++ R+ +D +
Sbjct: 123 DNGHNGLKSMTKAF--GADYHRVRFGIGRPPGRMQVADFVLRDFSSAERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+S+GL + +N+
Sbjct: 181 DAVECLVSEGLERAQSAYNS 200
>gi|182438174|ref|YP_001825893.1| peptidyl-tRNA hydrolase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178466690|dbj|BAG21210.1| putative peptidyl-tRNA hydrolase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 204
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 9/203 (4%)
Query: 9 RGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH------CKA 62
R + PWL VGLGNPG Y RHN VGF + D A G +
Sbjct: 5 RALMSDATDPWLIVGLGNPGPDYAANRHN-VGFMVADLLATRIGGKFKRAQKAQAQVVEG 63
Query: 63 TFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRH 122
G G V+L KP +YMNLSG L +YK+P + V+ HD++ + G+LRL+
Sbjct: 64 RMGPPGPGSRRVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGMLRLKL 123
Query: 123 NGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQ 182
GG GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ + +
Sbjct: 124 GGGDNGHNGLKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVD 181
Query: 183 EGVEVLKLLLSKGLTESARHFNT 205
+ ++ LL++GL + +N+
Sbjct: 182 RSADAVECLLAEGLERAQSAYNS 204
>gi|340357160|ref|ZP_08679785.1| aminoacyl-tRNA hydrolase [Sporosarcina newyorkensis 2681]
gi|339618569|gb|EGQ23165.1| aminoacyl-tRNA hydrolase [Sporosarcina newyorkensis 2681]
Length = 207
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG Y+ TRHN +GF++ID A+ + V+L KP
Sbjct: 23 LIIGLGNPGKTYEKTRHN-IGFQVIDELAKRLQAPAFQKKFNGQYTTVHTVQGKVILLKP 81
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PLA ++++ ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 82 MTYMNLSGECVRPLADFFEVNDEEIVVLYDDLDLPVGKIRLRQKGSAGGHNGMKSLIAHL 141
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIG+ RP G M ++L F+A + I+ A+Q+ + + E
Sbjct: 142 -GTTEFNRIRIGVDRPSGGMKVSDYVLAPFSADEQPLIEEAVQKSADACEEWQKTPFIEV 200
Query: 200 ARHFN 204
FN
Sbjct: 201 MNKFN 205
>gi|393198756|ref|YP_006460598.1| peptidyl-tRNA hydrolase [Solibacillus silvestris StLB046]
gi|327438087|dbj|BAK14452.1| peptidyl-tRNA hydrolase [Solibacillus silvestris StLB046]
Length = 187
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG Y+ TRHN +GF++ID A +N + + + V+L KP
Sbjct: 3 LIIGLGNPGKPYEHTRHN-IGFDVIDELANRWNAPLNQTKFNGMYATVYRPEGKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL Y+ + + ++V +DD+ L G LRLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECVRPLMDYFDIEIEDIIVIYDDLDLETGKLRLRGKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+G+ RPP M ++L KF+ + + A+++ + ++ L+K E
Sbjct: 122 -GTQEFNRIRVGVSRPPAGMKVADYVLAKFSKEDQPIVKEAVEKSCDAVETALTKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNKFN 185
>gi|297587542|ref|ZP_06946186.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
gi|297574231|gb|EFH92951.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
Length = 190
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 105/175 (60%), Gaps = 6/175 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG KY+ TRHN GF +ID A+ I +N + K+ G+GF+G+ V+L K
Sbjct: 2 YLIAGLGNPGSKYEYTRHN-AGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG++ YY L ++V DD+ +P G +R++ G G HNGLKS++
Sbjct: 61 PSTYMNDSGKAILDCFNYYNLSAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYL 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLK 189
+ ++FAR+++ +G+ D K F+L +F+ + ++ ID + +++++
Sbjct: 121 IQS-QDFARIKVSVGQNDNNYDLKDFVLSQFSKKEFEVLKKEIDMSSDACIKIVE 174
>gi|423349148|ref|ZP_17326804.1| peptidyl-tRNA hydrolase [Scardovia wiggsiae F0424]
gi|393703377|gb|EJD65578.1| peptidyl-tRNA hydrolase [Scardovia wiggsiae F0424]
Length = 200
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 112/194 (57%), Gaps = 10/194 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV----GDAPV 74
WL GLGNPG KY+GTRHN +GF D AE +S + A G+G +
Sbjct: 6 WLIAGLGNPGKKYEGTRHN-MGFMCADLLAERWSVSFSDHKGLALLGKGVMSLDGAAQKF 64
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
LAKP T+MN SG + ++AYY +P NR++V HDDM L G ++ ++ G GGHNG+KS
Sbjct: 65 FLAKPLTFMNDSGNAVASISAYYGIPENRIVVVHDDMDLEFGRIKTKNGGSPGGHNGIKS 124
Query: 135 VMNNFRGNREFARLRIGIGR----PPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+ + G ++ R+R+G+G + +++L FNA ++++D+ + + + ++
Sbjct: 125 IDKSL-GTADYNRVRMGVGHSRRGSHAHDNAISWVLGGFNASQKQQLDSFIADAADAAEM 183
Query: 191 LLSKGLTESARHFN 204
++ KG+ ++ FN
Sbjct: 184 IIFKGIEKTQEQFN 197
>gi|401564385|ref|ZP_10805280.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC6]
gi|400188883|gb|EJO23017.1| aminoacyl-tRNA hydrolase [Selenomonas sp. FOBRC6]
Length = 209
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 108/193 (55%), Gaps = 10/193 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGF----VGDAPVL 75
+ GLGNPG +Y T+HN VGF ++DA A+ +N K F +G V
Sbjct: 3 MIAGLGNPGAEYAQTKHN-VGFMLVDALADR----LNAPAWKEDFFSAVTEVRIGGEKVF 57
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SGE+ GP+ +YYK+ + + V HDDM +P G +R+R G GGHNG+KS+
Sbjct: 58 LVKPLTYMNNSGEAVGPMLSYYKMTADDLTVVHDDMDIPAGTVRIRKKGSSGGHNGIKSI 117
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G FAR+RIG+GRPP +L F A +I A+ + ++ +++ G
Sbjct: 118 IAHV-GGENFARVRIGVGRPPAGWTVINHVLAPFLAEDAPKIREAIGYLLPAVECIVTDG 176
Query: 196 LTESARHFNTIQK 208
+ + +N +K
Sbjct: 177 VELAMNRYNPHKK 189
>gi|411003251|ref|ZP_11379580.1| peptidyl-tRNA hydrolase [Streptomyces globisporus C-1027]
Length = 197
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----D 71
PWL VGLGNPG Y RHN VGF + D A G +A +G +G
Sbjct: 7 PWLIVGLGNPGPDYAANRHN-VGFMVADLLATRIGGKFKRAQKAQAQVVEGRIGPPGPAS 65
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNG
Sbjct: 66 RRVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGSLRLKLGGGDNGHNG 125
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ ++ + + ++ L
Sbjct: 126 LKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELEFLVDRSADAVECL 183
Query: 192 LSKGLTESARHFNT 205
L++GL + +N+
Sbjct: 184 LAEGLERAQSAYNS 197
>gi|296122873|ref|YP_003630651.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
gi|296015213|gb|ADG68452.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
Length = 191
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY GTRHN +G+E+ + G A + + PV+L +PQ
Sbjct: 4 IVGLGNPGGKYVGTRHN-IGWEVTAELSRRGGAPAGKSRFDAITREVVLKGVPVILLEPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T+MNLSG S G +A +YK+ L+ DD+ LP G LR+R G GG GL ++
Sbjct: 63 TFMNLSGRSVGQIAKFYKMSPADFLIVCDDLNLPLGKLRVRAGGSSGGQKGLADILQVL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G RLR+G+GRPPG MD A++L +F R +D A+ + ++ L+ G+ +
Sbjct: 122 GTDAVPRLRLGVGRPPGTMDAAAYVLAQFRKDERIEVDLAVATAADAAEVWLADGVDSAM 181
Query: 201 RHFNTIQKYK 210
FN K
Sbjct: 182 NRFNVSSDQK 191
>gi|453381134|dbj|GAC84239.1| peptidyl-tRNA hydrolase [Gordonia paraffinivorans NBRC 108238]
Length = 206
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 127/201 (63%), Gaps = 10/201 (4%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGF 68
+ T V + L VGLGNPG KY+ TRHN VG ++D A S G VH K A +
Sbjct: 14 YSTRVVK--LIVGLGNPGPKYEKTRHN-VGAMVVDGLASSAGERWK-VHKKSGAEVAEVR 69
Query: 69 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 128
+G PVLLAK + YMN SG GPLA +Y + ++V HD++ + G++RL+ GG GG
Sbjct: 70 LGGLPVLLAKARVYMNESGRQIGPLAKFYSVDPADLIVVHDELDIDFGLVRLKKGGGEGG 129
Query: 129 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
HNGL+S+ + G +++ R+R+GIGRPPG+ DP F+L+ F A R ++ ++ G + +
Sbjct: 130 HNGLRSI-SQVMGTKDYLRVRMGIGRPPGRQDPADFVLKPFPAADRAEVELLVRNGCDAV 188
Query: 189 KLLLSKGLTESARHFNTIQKY 209
+LL+++GL E+A+ NT+ +
Sbjct: 189 ELLVTQGL-EAAQ--NTVHAW 206
>gi|333921147|ref|YP_004494728.1| peptidyl-tRNA hydrolase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483368|gb|AEF41928.1| Peptidyl-tRNA hydrolase [Amycolicicoccus subflavus DQS3-9A1]
Length = 189
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLA 77
++ GLGNPG +Y TRHN VG+ + D A G + +A + + V+LA
Sbjct: 3 FVVAGLGNPGTQYATTRHN-VGYLVADVLAARYGARFSGQKRTRADLAEVRLSGVKVVLA 61
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP TYMNLSG A ++ +P V+ HDD+ L GV+RL+ GG GGHNGL+S+
Sbjct: 62 KPHTYMNLSGGPISATAKFFSVPPENVIAVHDDLDLDFGVVRLKRAGGEGGHNGLRSLTA 121
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
+ R++ R+R+G+GRPPGQM +++L+ F+A R+ + ++E +
Sbjct: 122 HLH-TRDYLRVRLGVGRPPGQMAAASYVLKPFSATERKELGVIVEEAAD 169
>gi|313888220|ref|ZP_07821894.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845910|gb|EFR33297.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 189
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG KY+ TRHN VGF ID A+ I +N + K G+G +G+ V+L K
Sbjct: 2 YIIAGLGNPGKKYEDTRHN-VGFSTIDVLADKLNIKVNKIKFKGLVGEGRIGNEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SGES + +YKL ++V DD+ + L+++ NG G HNGLKS++ N
Sbjct: 61 PHTFMNNSGESIVEILNFYKLKPEDLMVIVDDIDIEFAQLKIKKNGSAGTHNGLKSIV-N 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+++FAR +IG+G+ D +F+L F + R+ I A+ + + + G+ +
Sbjct: 120 LTGSKDFARFKIGVGKKHPNEDLASFVLSNFPSKDRKHIADAIDACADAVIDAVDSGIDK 179
Query: 199 SARHFNT 205
S +N
Sbjct: 180 SMNSYNN 186
>gi|334134032|ref|ZP_08507561.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF7]
gi|333608379|gb|EGL19677.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF7]
Length = 189
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
FVGLGNPG +Y+ TRHN +GF ID FAE G+S CK + V L KP
Sbjct: 4 FVGLGNPGKQYEHTRHN-IGFMAIDRFAEKWGVSSFQNKCKGHLAEVRVNGTKAYLLKPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGES +YK+ ++ +++ +DDM P G +RLR+ G GGHNG+KSV+ +
Sbjct: 63 TYMNLSGESIRAFMDFYKVDVSDLVILYDDMDTPFGNIRLRYQGSAGGHNGIKSVIAH-T 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G F R+R+GI RP ++L F+ + L + E ++ LS+ ++
Sbjct: 122 GTSTFNRIRMGINRPNPGYPIVDYVLSNFSKAETGALPAVLDKTCEAMEHCLSEPFEKTM 181
Query: 201 RHFN 204
FN
Sbjct: 182 AVFN 185
>gi|146317669|ref|YP_001197381.1| peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|146319858|ref|YP_001199569.1| peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|253750930|ref|YP_003024071.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|253752829|ref|YP_003025969.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|253754654|ref|YP_003027794.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|386577009|ref|YP_006073414.1| Peptidyl-tRNA hydrolase [Streptococcus suis GZ1]
gi|386578987|ref|YP_006075392.1| peptidyl-tRNA hydrolase [Streptococcus suis JS14]
gi|386581054|ref|YP_006077458.1| peptidyl-tRNA hydrolase [Streptococcus suis SS12]
gi|386587288|ref|YP_006083689.1| peptidyl-tRNA hydrolase [Streptococcus suis A7]
gi|403060710|ref|YP_006648926.1| peptidyl-tRNA hydrolase [Streptococcus suis S735]
gi|166229459|sp|A4VYI0.1|PTH_STRS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229461|sp|A4VS92.1|PTH_STRSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145688475|gb|ABP88981.1| Peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|145690664|gb|ABP91169.1| Peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|251815219|emb|CAZ50783.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|251817118|emb|CAZ54839.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|251819074|emb|CAR44088.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|292557471|gb|ADE30472.1| Peptidyl-tRNA hydrolase [Streptococcus suis GZ1]
gi|319757179|gb|ADV69121.1| peptidyl-tRNA hydrolase [Streptococcus suis JS14]
gi|353733200|gb|AER14210.1| peptidyl-tRNA hydrolase [Streptococcus suis SS12]
gi|354984449|gb|AER43347.1| peptidyl-tRNA hydrolase [Streptococcus suis A7]
gi|402808036|gb|AFQ99527.1| peptidyl-tRNA hydrolase [Streptococcus suis S735]
Length = 189
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 8/189 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLL 76
L +GLGNPGD+Y T+HN VGF ++D A+ + ++ N H K A F+ + L
Sbjct: 4 LIIGLGNPGDRYFETKHN-VGFMLLDKIAKRENVTFN--HDKIFQADIATTFIDGEKIYL 60
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP T+MN SG++ L YY L +LV +DD+ + G +R R G GGHNG+KS++
Sbjct: 61 VKPTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIV 120
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+ G +EF R++IGIGRP G+M +L F+ R ID AL + + + + L +
Sbjct: 121 KHI-GTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDD 179
Query: 197 TESA-RHFN 204
++ R FN
Sbjct: 180 FDTVMRKFN 188
>gi|427418824|ref|ZP_18909007.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 7375]
gi|425761537|gb|EKV02390.1| peptidyl-tRNA hydrolase [Leptolyngbya sp. PCC 7375]
Length = 209
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 114/201 (56%), Gaps = 11/201 (5%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVG 70
A P L VGLGNPG KY TRHN +GFE+ID+ A+S I + + FG+
Sbjct: 6 AAAPPTPKLLVGLGNPGQKYDRTRHN-IGFEVIDSLAKSWSIKLTENKRFQGHFGETRSN 64
Query: 71 DAP-VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
++L KP TYMN SG+S + +YKL + VLV +DDM LP G LRLR +G GGH
Sbjct: 65 SGERLILLKPTTYMNRSGQSVRAVFDWYKLLPSEVLVIYDDMDLPIGRLRLRLSGSAGGH 124
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKA------FLLQKFNAIARERIDTALQE 183
NG+KS++++ G ++F RLR+GI R D +A +L KF R+ ID A+
Sbjct: 125 NGMKSIISHL-GTQDFPRLRLGISRTDTS-DKQANRAVVSHVLGKFAPDERKVIDAAITL 182
Query: 184 GVEVLKLLLSKGLTESARHFN 204
+ ++ L KG+ + +N
Sbjct: 183 ADDAVEFSLRKGIERAMSLYN 203
>gi|383767710|ref|YP_005446692.1| peptidyl-tRNA hydrolase [Phycisphaera mikurensis NBRC 102666]
gi|381387979|dbj|BAM04795.1| peptidyl-tRNA hydrolase [Phycisphaera mikurensis NBRC 102666]
Length = 191
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGIS--MNTVHCKATFGQGFVGDAP--VL 75
L +GLGNPG +Y TRHN GF +++ FA G++ H G VG AP +L
Sbjct: 3 LIIGLGNPGREYADTRHN-AGFMVLERFATRHGLAGPRQRFHAGTIDGSVTVGGAPHKLL 61
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L +P TYMN SG+S +YK+ + VL+ DD+ CG LRL+ G GGHNGLK V
Sbjct: 62 LVQPLTYMNRSGQSVREAVDFYKVAVKDVLIVVDDIAFGCGDLRLKAMGSAGGHNGLKDV 121
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
G R +ARLRIGI PG++ ++L +F A RER+D AL E + ++ L+ G
Sbjct: 122 -ERVLGTRAYARLRIGID-APGRIPQVDYVLGRFTADQRERLDPALDEACQAVEAWLTLG 179
Query: 196 LTESARHFN 204
+ ++ N
Sbjct: 180 IEKAMNKVN 188
>gi|386585209|ref|YP_006081611.1| peptidyl-tRNA hydrolase [Streptococcus suis D12]
gi|353737355|gb|AER18363.1| peptidyl-tRNA hydrolase [Streptococcus suis D12]
Length = 190
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 8/189 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLL 76
L +GLGNPGD+Y T+HN VGF ++D A+ + ++ N H K A F+ + L
Sbjct: 4 LIIGLGNPGDRYFETKHN-VGFMLLDKIAKRENVTFN--HDKIFQADIATTFIDGEKIYL 60
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP T+MN SG++ L YY L +LV +DD+ + G +R R G GGHNG+KS++
Sbjct: 61 VKPTTFMNESGKAVHALMTYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIV 120
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+ G +EF R++IGIGRP G+M +L F+ R ID AL + + + + L +
Sbjct: 121 KHI-GTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDD 179
Query: 197 TESA-RHFN 204
++ R FN
Sbjct: 180 FDTVMRKFN 188
>gi|339634732|ref|YP_004726373.1| peptidyl-tRNA hydrolase [Weissella koreensis KACC 15510]
gi|338854528|gb|AEJ23694.1| peptidyl-tRNA hydrolase [Weissella koreensis KACC 15510]
Length = 188
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATF-GQGFVGDAPVLLAK 78
+ VGLGN G +Y TRHN VGF IDAFA+ GI+ F +G++G VLL K
Sbjct: 3 IIVGLGNIGKEYDQTRHN-VGFMTIDAFAQELGINFKQDGPHHAFVAEGWIGTDKVLLVK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ PL YY L + +L+ DDM + G LRLR G GGHNG+KS+++
Sbjct: 62 PTTYMNLSGEAVAPLMKYYNLVIEDLLIIQDDMDMELGRLRLRTKGSAGGHNGIKSIISQ 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQ 182
G + F RL+ GI P + F+L KFN +D +++
Sbjct: 122 L-GTQNFNRLKFGIAHPKHEKQAVINFVLGKFNKDDAITVDQSIE 165
>gi|302551982|ref|ZP_07304324.1| peptidyl-tRNA hydrolase [Streptomyces viridochromogenes DSM 40736]
gi|302469600|gb|EFL32693.1| peptidyl-tRNA hydrolase [Streptomyces viridochromogenes DSM 40736]
Length = 200
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
T A PWL VGLGNPG +Y G RHN VGF + D A+ G +A +G +G
Sbjct: 4 TTDAAAPWLIVGLGNPGPEYAGNRHN-VGFMVADLLADRVGGRFKRAGRAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
+ V++AKP +YMNLSG L +YK+P+ V+ HD++ + G LRL+ GG
Sbjct: 63 PPGPLNRRVIVAKPMSYMNLSGGPVNTLREFYKVPVAHVVAVHDELDIDYGTLRLKLGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ F E+ R+R GIGRPPG+M F+L+ F+++ R+ +D +
Sbjct: 123 DNGHNGLKSMTKAF--GSEYHRVRFGIGRPPGRMPVADFVLRDFSSVERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 181 DAVECLVIEGLERAQSTYNS 200
>gi|374620518|ref|ZP_09693052.1| peptidyl-tRNA hydrolase [gamma proteobacterium HIMB55]
gi|374303745|gb|EHQ57929.1| peptidyl-tRNA hydrolase [gamma proteobacterium HIMB55]
Length = 200
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 106/192 (55%), Gaps = 2/192 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG+KY GTRHN G + + A A+ I + G+G V L
Sbjct: 7 LIVGLGNPGEKYIGTRHN-AGADFVSAVAKLNAIELKADKKVAGRIGRGIVNGQDTRLLI 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SG++ G A Y+++ +L+ HD++ +P G R + +GGHGGHNGL+ ++
Sbjct: 66 PDTFMNHSGKAVGLAAKYFQISPEHILIAHDELDMPPGASRFKFDGGHGGHNGLRDIIPA 125
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+R F RLR+GIG P A++L K + I + ID + E + L+LL++ +
Sbjct: 126 LGGSRAFWRLRVGIGHPGNANKVSAWVLNKASKIEQALIDQSQNEAIRALELLMAGDDVK 185
Query: 199 SARHFNTIQKYK 210
+ ++ K K
Sbjct: 186 AMTQLHSNDKTK 197
>gi|68536582|ref|YP_251287.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|260577725|ref|ZP_05845660.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
gi|119390905|sp|Q4JU38.1|PTH2_CORJK RecName: Full=Peptidyl-tRNA hydrolase 2; Short=PTH 2
gi|68264181|emb|CAI37669.1| pthB [Corynebacterium jeikeium K411]
gi|258604120|gb|EEW17362.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
Length = 240
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 114/210 (54%), Gaps = 10/210 (4%)
Query: 7 LRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFG 65
L G A W+ +GLGNPG KY TRHN +G+ ID E V KA
Sbjct: 36 LTVGELQEFAPEWIVIGLGNPGAKYADTRHN-IGYWPIDRLVERYEAQWLPVEGQKAHAA 94
Query: 66 QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
V + PVLL + TYMN SGE+ GPLA+ LP R++V HD++ + G +R++ GG
Sbjct: 95 LITVEETPVLLLRSTTYMNNSGEAVGPLASALSLPAERIIVCHDELDIAAGQVRIKDKGG 154
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA--IARER--IDTAL 181
GGHNGL+S+ G + + R+R+GIGRPP F+L F I E ++ L
Sbjct: 155 EGGHNGLRSMTAEL-GTQHYVRVRMGIGRPPKGTSVIDFVLSPFEEADIDAENGWMENTL 213
Query: 182 QEGVEVLKLLLSKGLTESARHFNTIQKYKH 211
++ V+ + L+++ G T+ AR N I KH
Sbjct: 214 RDSVDSVTLIVNNG-TDIAR--NDIHTRKH 240
>gi|269217261|ref|ZP_06161115.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
gi|402829076|ref|ZP_10877957.1| aminoacyl-tRNA hydrolase [Slackia sp. CM382]
gi|269129398|gb|EEZ60483.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
gi|402284830|gb|EJU33323.1| aminoacyl-tRNA hydrolase [Slackia sp. CM382]
Length = 185
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG++Y TRHN GFE+ID A +S C A G+ ++LAKP
Sbjct: 3 LIVGLGNPGEEYAHTRHN-AGFEVIDLLAGELRVSYWKSECGALTGKTAYRGEDIVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
Q+YMN SG LAA Y + ++V HD++ + G +R++ GG GHNGLKS+
Sbjct: 62 QSYMNASGGPVKQLAAAYGATPDDIVVIHDELDIDPGTIRVKFGGGLAGHNGLKSIAEKL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ +++AR+RIGIGRPPG+M ++L A + A G + + L GL ++
Sbjct: 122 Q-TKDWARVRIGIGRPPGRMPVVDWVLGTPRKEAWDDFQQAAHLGSQAVLYFLEHGLAKT 180
Query: 200 ARHFN 204
+ +N
Sbjct: 181 QQEYN 185
>gi|227512316|ref|ZP_03942365.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
gi|227084491|gb|EEI19803.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
Length = 189
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y GTRHN GF +++ FA+ GIS+ A G FV VL+ +P
Sbjct: 6 MIVGLGNIGPQYDGTRHN-TGFMVVEEFAKKHGISIKIRKMNAKMGSAFVNGQKVLVVEP 64
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + PL +Y+++ V+V HDDM LP G +R++ G GGHNG+KS++NN
Sbjct: 65 TTFMNDSGIAVKPLMSYFEIENKDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLINNL 124
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G F+R+R+GI P ++L +F+ A V L+ L
Sbjct: 125 -GTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLD 177
>gi|451335537|ref|ZP_21906104.1| Peptidyl-tRNA hydrolase [Amycolatopsis azurea DSM 43854]
gi|449421942|gb|EMD27333.1| Peptidyl-tRNA hydrolase [Amycolatopsis azurea DSM 43854]
Length = 198
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y G RHN VGF ++D A G A +G + V+L KP
Sbjct: 14 LLAGLGNPGPQYAGNRHN-VGFMVLDELAGRVGGKFKAHKSGAEVLEGRLSGQRVVLVKP 72
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
++YMNLSG A ++K+P V+V HD++ + G L+++ GG GHNGL+S+ +
Sbjct: 73 RSYMNLSGGPVVGAARFFKIPPAGVVVVHDELDVDFGALKMKLGGGDNGHNGLRSITKSL 132
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +++ R+R G+GRPPG+ DP F+L+ F+ + R+ + + + ++ L+S GL +
Sbjct: 133 -GTKDYYRVRFGVGRPPGRQDPADFVLKDFSTVERKELAFEIDRCADAVEALISTGLVAA 191
Query: 200 ARHFNT 205
F+
Sbjct: 192 QNTFHA 197
>gi|402311684|ref|ZP_10830620.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium ICM7]
gi|400371208|gb|EJP24172.1| aminoacyl-tRNA hydrolase [Lachnospiraceae bacterium ICM7]
Length = 209
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ +
Sbjct: 18 SKMKLIVGLGNPGREYVNTRHN-AGFYVVEKLAYELGEDISERKYKGLFAKVRIGNEKAI 76
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ +PQTYMN SGES Y+K+ V+V +DD+ L G LR+R G GGHNG+KS+
Sbjct: 77 ILEPQTYMNNSGESVRAFMDYFKIEAADVIVVYDDINLEPGNLRIRLKGSAGGHNGIKSL 136
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G +F R+++G+G P +MD +L +F ++ +D A + +E +KL++
Sbjct: 137 IAHM-GTSDFPRVKVGVGEKPAKMDLADHVLGRFGDTDKKLLDEAASDAIEAIKLMVEGQ 195
Query: 196 LTESARHFNT 205
+ +NT
Sbjct: 196 YDTAMNRYNT 205
>gi|51894373|ref|YP_077064.1| peptidyl-tRNA hydrolase [Symbiobacterium thermophilum IAM 14863]
gi|68052923|sp|Q67JD0.1|PTH_SYMTH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51858062|dbj|BAD42220.1| Stage V sporulation protein C, peptidyl-tRNA hydrolase
[Symbiobacterium thermophilum IAM 14863]
Length = 189
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP--VLLA 77
L VGLGNPG +Y TRHN G+ ++DAFA G+++ + +G+ G V+L
Sbjct: 4 LIVGLGNPGPRYAATRHN-AGWMLLDAFARKHGVAIEQRGFEGLYGELRWGAEAEKVILL 62
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP TYMNLSG S A +Y++ +LV DD+ L G LRLR G GGHNG+KSV+
Sbjct: 63 KPLTYMNLSGRSVAQAARFYRIAPADILVLFDDLDLEPGRLRLRAKGSAGGHNGVKSVIA 122
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G EF RLRIGIGRP + ++L F + AL VE ++ L++G+
Sbjct: 123 EL-GTAEFPRLRIGIGRPAPGWEVIDWVLAPFGPDDAAAVAAALPRAVEAVECFLTEGIL 181
Query: 198 ESARHFNT 205
+ +NT
Sbjct: 182 AAMNRYNT 189
>gi|427414474|ref|ZP_18904664.1| peptidyl-tRNA hydrolase [Veillonella ratti ACS-216-V-Col6b]
gi|425714434|gb|EKU77439.1| peptidyl-tRNA hydrolase [Veillonella ratti ACS-216-V-Col6b]
Length = 192
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ T+HN +GF +IDA A + + KA + VLL KP
Sbjct: 3 MVVGLGNPGREYEKTKHN-IGFMVIDAMAAKEAHTPWREDFKALITTITIDGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SGES GPL YYK+ + V +DDM LP G +R+R NG GGHNG+KS++ +
Sbjct: 62 QTFMNASGESVGPLMRYYKIDASDVYCVYDDMDLPVGKIRIRPNGSAGGHNGIKSLIAHM 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R GIGRP Q +L F +++++ +++ + + L GL +
Sbjct: 122 -GTSEFPHFRFGIGRPLPQWTVIDHVLAPFPEEQQDKVNKGIEDMAKAILGTLEVGLDKG 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNLYN 185
>gi|379710861|ref|YP_005266066.1| Peptidyl-tRNA hydrolase (PTH) [Nocardia cyriacigeorgica GUH-2]
gi|374848360|emb|CCF65432.1| Peptidyl-tRNA hydrolase (PTH) [Nocardia cyriacigeorgica GUH-2]
Length = 191
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 6/187 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVL 75
P L VGLGNPG +Y+ TRHN VGF + D AE G +VH K A + VL
Sbjct: 6 PALVVGLGNPGPEYERTRHN-VGFLVADVLAERVG-GRFSVHKKSGADLLTARLDGRQVL 63
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+AKP++YMNLSG LA ++ +P V+V HD++ LP G +RL+ GG GGHNGL+SV
Sbjct: 64 IAKPRSYMNLSGRPVAALARFFSVPATEVIVVHDELDLPFGAIRLKRGGGEGGHNGLRSV 123
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+++ R RIGIGRPPG+ DP ++L+ F+A R+ + +++ + ++LLL G
Sbjct: 124 SQAL-TTKDYLRTRIGIGRPPGRQDPADYVLKPFSAPERKEVPVLVEQAADAVELLLRVG 182
Query: 196 LTESARH 202
L E+A++
Sbjct: 183 L-ETAQN 188
>gi|344345141|ref|ZP_08775997.1| Peptidyl-tRNA hydrolase [Marichromatium purpuratum 984]
gi|343803232|gb|EGV21142.1| Peptidyl-tRNA hydrolase [Marichromatium purpuratum 984]
Length = 194
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 99/174 (56%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG +Y+ TRHN VGF +D+ A S G+ + +G + L K
Sbjct: 8 LIVGLGNPGAQYEATRHN-VGFWFVDSLARSAGVDFRPESRFHGELCRCVIGGRDLRLLK 66
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG S +A Y+ +PL +L+ HD++ LP G +RL+ GGH GHNGL+ ++
Sbjct: 67 PSTYMNHSGRSVAAVARYFDIPLESILIAHDELDLPVGAVRLKQGGGHAGHNGLRDSISA 126
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
G R+F RLRIGI P + ++L + + R+ ID AL E VL LL
Sbjct: 127 L-GGRDFWRLRIGIDHPGDRSLVTGYVLGRPSGSDRQAIDDALFETERVLDDLL 179
>gi|260577724|ref|ZP_05845659.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
gi|258604119|gb|EEW17361.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
Length = 209
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 106/177 (59%), Gaps = 18/177 (10%)
Query: 7 LRRGFCTAVARP----------WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQ--GIS 54
L RG T VA P WL +GLGNPGDKY TRHN VG +I + Q S
Sbjct: 10 LERGLET-VASPNKKQHTNSDTWLIIGLGNPGDKYANTRHN-VGRMVIGELLDRQVPAAS 67
Query: 55 MNTVHCKAT--FGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMG 112
++T H K + + V+LA+P+T+MN+SG LAA++K+P ++V +DD+
Sbjct: 68 LST-HKKTNTDIAEVKIAGRKVVLAQPRTFMNVSGGPVQQLAAFFKIPAENIIVAYDDLE 126
Query: 113 LPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 169
G ++LR +GG GHNGLKS+ + G +++ RL GIGRPPG+MDP A++L+ F
Sbjct: 127 GDPGAVKLRQSGGDKGHNGLKSITKSL-GTKDYWRLSCGIGRPPGRMDPAAYVLKPF 182
>gi|268608428|ref|ZP_06142155.1| peptidyl-tRNA hydrolase [Ruminococcus flavefaciens FD-1]
Length = 208
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y TRHN GF ++D A G +N + K + +GD LL K
Sbjct: 23 YVIAGLGNPGMEYDNTRHN-AGFMVLDMLASQLGEEINRLRFKGKTAEVMIGDKRCLLLK 81
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SGES +YK+ ++ ++V DD+ L G LR+R G HGGHNGL+S+ +
Sbjct: 82 PTTYMNNSGESIVQALEFYKIDVDHLIVVCDDISLDAGKLRIRRKGSHGGHNGLRSIC-D 140
Query: 139 FRGNREFARLRIGIGRPPG-QMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G ++ R+++G+G+ P D ++L KF E++ + + E LKL++
Sbjct: 141 LTGRDDYQRIKMGVGKKPHPDYDLAKWVLGKFGKEDAEKMKQSAENACECLKLMVQGKTD 200
Query: 198 ESARHFNT 205
E+ +N+
Sbjct: 201 EAMNKYNS 208
>gi|443328965|ref|ZP_21057557.1| peptidyl-tRNA hydrolase [Xenococcus sp. PCC 7305]
gi|442791510|gb|ELS01005.1| peptidyl-tRNA hydrolase [Xenococcus sp. PCC 7305]
Length = 201
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 119/205 (58%), Gaps = 16/205 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD------ 71
P L VGLGNP +Y TRHN +GFE +D+ A++ G S F QG V +
Sbjct: 7 PELIVGLGNPESRYDQTRHN-IGFEAVDSLAKTWGFSWRE---NKRF-QGLVAEGVSPYG 61
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ + L KP TYMN SG++ + +YK+ + VLV +DDM LP G LR+R +G GGHNG
Sbjct: 62 SKMRLLKPLTYMNRSGQAVRAVIDWYKIAPDSVLVIYDDMDLPVGRLRIRRSGSAGGHNG 121
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G ++F RLRIGIG+ G+ +L KF ++ I+ L V+ ++
Sbjct: 122 MKSIIAHL-GKQDFPRLRIGIGKSDGKRQTIGHVLGKFAPEEQKVIEEMLDISVKAVEKS 180
Query: 192 LSKGLTESARHFNTIQKYKHIRLQN 216
L +G+ ++ +N+ K ++++N
Sbjct: 181 LKEGVEKAMNIYNS----KQLKIEN 201
>gi|410656906|ref|YP_006909277.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. DCA]
gi|410659944|ref|YP_006912315.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. CF]
gi|409019261|gb|AFV01292.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. DCA]
gi|409022300|gb|AFV04330.1| Peptidyl-tRNA hydrolase [Dehalobacter sp. CF]
Length = 190
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
Query: 22 VGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 81
+GLGNPG KY T+HN GF ++D A +G+S + + D + KP T
Sbjct: 5 IGLGNPGVKYSETKHN-AGFMLLDRIAAQEGLSFRN-DFRGKVAEMRNKDERIFFLKPIT 62
Query: 82 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRG 141
YMNLSG + G L +YYK+ +LV HDDM LP G +RLR G GGHNGLKS++ G
Sbjct: 63 YMNLSGLAVGELISYYKINTQNILVVHDDMDLPLGRIRLRAKGSAGGHNGLKSIIAEL-G 121
Query: 142 NREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 201
++EF RL+IG+GRP + D +L F + +D L + L + E+
Sbjct: 122 SQEFWRLKIGVGRPKAEFDVVNHVLSTFAKEEKAVLDGTLDRAQRAVGLWIEGHGDEAMN 181
Query: 202 HFN 204
FN
Sbjct: 182 LFN 184
>gi|225433776|ref|XP_002268699.1| PREDICTED: uncharacterized protein LOC100253226 [Vitis vinifera]
Length = 518
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 64/81 (79%)
Query: 55 MNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 114
M+ VH KA FGQGFVGD V LA P TYMNLSGES GPLAAYYKLPLNR++VFHDD LP
Sbjct: 1 MDIVHHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLPLNRMVVFHDDKSLP 60
Query: 115 CGVLRLRHNGGHGGHNGLKSV 135
CGVL L H GGHG HNG + V
Sbjct: 61 CGVLCLHHKGGHGSHNGRRIV 81
>gi|456385230|gb|EMF50798.1| pth protein [Streptomyces bottropensis ATCC 25435]
Length = 200
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 110/200 (55%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
T + PWL LGNPG +Y RHN VGF + D AE G +A +G +G
Sbjct: 4 TTDPSAPWLVASLGNPGPEYAANRHN-VGFMVADLLAERIGGRFKRAGKAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
+ V+LAKP ++MNLSG L +YK+P+ ++ HD++ + G LRL+ GG
Sbjct: 63 PPGPANRRVILAKPMSFMNLSGGPVTALRDFYKVPVANIVAIHDELDIDYGALRLKFGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS+ ++ R+R GIGRPPG+M F+L+ F+A R+ +D +
Sbjct: 123 DNGHNGLKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSATERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 181 DAVECLVIEGLERAQGTYNS 200
>gi|333394473|ref|ZP_08476292.1| peptidyl-tRNA hydrolase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 188
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 3/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ T+HN VGF ID A + ++ + +A + F D V L KP
Sbjct: 3 MIVGLGNPGKKYEQTKHN-VGFMTIDRMAAAHQVTFSHNQFEANYATYFENDEKVYLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG + PL YY++ L ++V +DDM L G LRLR +G GGHNG+KS++ +F
Sbjct: 62 QTFMNDSGRAVKPLMTYYQIQLAELMVVYDDMDLVPGRLRLREHGSAGGHNGIKSLI-SF 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
+F R+RIG G P + ++L F+ AR +D ++ +E L+
Sbjct: 121 LQTSDFNRVRIGTGHPE-RRSVVDWVLSPFSDEARPLVDRSIDTAIEALE 169
>gi|374992834|ref|YP_004968333.1| peptidyl-tRNA hydrolase [Desulfosporosinus orientis DSM 765]
gi|357211200|gb|AET65818.1| peptidyl-tRNA hydrolase [Desulfosporosinus orientis DSM 765]
Length = 185
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG +Y TRHN +GF ++D AE + + + +G + + L KP
Sbjct: 3 VIIGLGNPGAQYAETRHN-IGFLLVDLLAEVHKLQFRS-KFQGLLAEGNIEGERLFLLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S L+ +YKL +LV DDM LP G +RLR +G GGHNG+KS+
Sbjct: 61 QTFMNLSGRSVSELSRFYKLSQEDLLVVQDDMDLPLGKIRLRDHGSSGGHNGIKSIQFEL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ RL++G+GRPP + DP ++L F + +D L + + L + KG E
Sbjct: 121 -GSERLWRLKLGVGRPPKEWDPARYVLSPFAEDETKLLDDVLGRAEKAVYLWI-KGEYER 178
Query: 200 A 200
A
Sbjct: 179 A 179
>gi|239988327|ref|ZP_04708991.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 11379]
Length = 197
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----D 71
PWL VGLGNPG Y RHN VGF + D A G +A +G +G
Sbjct: 7 PWLIVGLGNPGPDYAANRHN-VGFMVADLLATRIGGKFKRAQKAQAQVVEGRIGPPGPAS 65
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNG
Sbjct: 66 RRVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGALRLKLGGGDNGHNG 125
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ L
Sbjct: 126 LKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECL 183
Query: 192 LSKGLTESARHFNT 205
L++GL + +N+
Sbjct: 184 LAEGLERAQSAYNS 197
>gi|302877723|ref|YP_003846287.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
gi|302580512|gb|ADL54523.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
Length = 192
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 10/185 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATF----GQGFVGDAPVL 75
L VGLGNPG +Y+ TRHN VGF +D AE ++ + +A F +G V ++
Sbjct: 6 LIVGLGNPGREYEATRHN-VGFWWVDELAEEAELNFKS---EAKFHGLSARGLVLGRELI 61
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KPQT+MNLSG S G LA +YK+ ++LV HD++ L G+ RL+ G HGGHNGLK +
Sbjct: 62 LLKPQTFMNLSGRSVGALAQFYKIAPAQILVVHDELDLQPGIARLKLGGSHGGHNGLKDI 121
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ G REF RLR+GIG P + F+L RE + A + ++VL +L G
Sbjct: 122 IAQL-GGREFWRLRLGIGHPGDRAQVSDFVLGHPREAERELMLEAQHQSMQVLPSVLD-G 179
Query: 196 LTESA 200
E+A
Sbjct: 180 KMEAA 184
>gi|417091647|ref|ZP_11956453.1| peptidyl-tRNA hydrolase [Streptococcus suis R61]
gi|353532953|gb|EHC02621.1| peptidyl-tRNA hydrolase [Streptococcus suis R61]
Length = 189
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 8/189 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLL 76
L +GLGNPGD+Y T+HN VGF ++D A+ + ++ + H K A F+ + L
Sbjct: 4 LIIGLGNPGDRYFETKHN-VGFMLLDKIAKRENVTFS--HDKIFQADIATTFIDGEKIYL 60
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP T+MN SG++ L AYY L +LV +DD+ + G +R R G GGHNG+KS++
Sbjct: 61 VKPTTFMNESGKAVHALMAYYGLDATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIV 120
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+ G +EF R++IGIGRP G+M +L F+ R ID AL + + + + L +
Sbjct: 121 KHI-GTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDD 179
Query: 197 TESA-RHFN 204
++ R FN
Sbjct: 180 FDTIMRKFN 188
>gi|427706338|ref|YP_007048715.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7107]
gi|427358843|gb|AFY41565.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7107]
Length = 212
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 11/204 (5%)
Query: 10 GFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQG- 67
G A+ P L VGLGNP KY+ TRHN +GF +DA A + IS+ + +G+G
Sbjct: 5 GTQPALVIPQLIVGLGNPEPKYEQTRHN-IGFAAVDALARAWQISVTENRKFQGEYGEGM 63
Query: 68 -FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 126
F G+ + L KP TYMN SG++ + ++YKLP VL+ +DDM LP G RLR +G
Sbjct: 64 AFAGNK-IRLLKPLTYMNRSGQAIQSVTSWYKLPPESVLIIYDDMDLPLGKTRLRLSGSA 122
Query: 127 GGHNGLKSVMNNFRGNREFARLRIGIGRPP-----GQMDPKAFLLQKFNAIARERIDTAL 181
GGHNG+KS + + + F RLRIGIG+P + + +L KF+A + + L
Sbjct: 123 GGHNGMKSAIAHLN-TQNFPRLRIGIGKPKDAANGDNSETVSHVLGKFSATETQLMSAVL 181
Query: 182 QEGVEVLKLLLSKGLTESARHFNT 205
Q V+ +++ L +G+ ++ N+
Sbjct: 182 QFVVDCVEMSLKQGVEKAMNRCNS 205
>gi|365903692|ref|ZP_09441515.1| peptidyl-tRNA hydrolase [Lactobacillus malefermentans KCTC 3548]
Length = 185
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGN G +YK TRHN GF ++D+FAE ++ T +A GF+ VLL KP
Sbjct: 3 MIIGLGNIGPQYKKTRHN-TGFMVVDSFAEKNNLTFTTRKMEAKLASGFINGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + PL +YKL ++V HDDM LP G +RLR G GGHNG++S++++
Sbjct: 62 TTFMNESGRAVRPLMDFYKLTPEDIIVVHDDMDLPLGKIRLRQKGSAGGHNGIRSLISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G F R+R+G+ P + ++L KF + D E + L+ +S
Sbjct: 122 -GTENFKRIRVGV-EHPAKSTVVDYVLGKFTKEQQPLFDEGKDEAIGALEDWIS 173
>gi|335049997|ref|ZP_08542978.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 199-6]
gi|333761904|gb|EGL39430.1| aminoacyl-tRNA hydrolase [Megasphaera sp. UPII 199-6]
Length = 190
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ T+HN GF +DA A G A +LL KP
Sbjct: 3 MIVGLGNPGREYENTKHN-TGFMTVDALAADMGADRWQQKMAALVASVSFRGETILLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GPL +YKL +V + +DDM LP G LR+R +G GGHNG+KS+ N
Sbjct: 62 QTYMNDSGRAVGPLMRWYKLAEPQVYIVYDDMDLPVGRLRIRKSGSDGGHNGIKSIFAN- 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R RIGIGRP Q +L F + V +K L G+ +
Sbjct: 121 -GCTEFIRFRIGIGRPLPQWSVVDHVLAPFTPDVLPAFQEGVAAAVAAIKGCLELGVDKG 179
Query: 200 ARHFNTIQK 208
FN +K
Sbjct: 180 MNRFNPKKK 188
>gi|427440724|ref|ZP_18924996.1| aminoacyl-tRNA hydrolase [Pediococcus lolii NGRI 0510Q]
gi|425787431|dbj|GAC45784.1| aminoacyl-tRNA hydrolase [Pediococcus lolii NGRI 0510Q]
Length = 185
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 99/174 (56%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y TRHN GF ++DA A+ G+ +H +A G+ F+ VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHN-TGFMVVDALAKKYGVDHFKIHHEAMVGEFFLNGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL YY L L ++V +DDM +P G +RLR G GGHNG+KS++ +
Sbjct: 62 TTYMNDSGRAVRPLMDYYDLALTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F RLR+GI P Q ++L +F + + +Q + L L+
Sbjct: 122 -GTEKFRRLRVGIEHPAHQ-KVVDYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|427712938|ref|YP_007061562.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 6312]
gi|427377067|gb|AFY61019.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 6312]
Length = 205
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFV-GDAPVL 75
P L VGLGNPG+KY TRHN +GF +IDA A++ IS+ + G+G + G +
Sbjct: 7 PQLIVGLGNPGEKYAQTRHN-IGFRVIDALAQAWHISLTSQSKFHGLLGEGIIPGQGKIR 65
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG+S + +YKLPLN +LV +DD L G +R+R +G GGHNG++S+
Sbjct: 66 LLKPTTYMNQSGQSLRAVLDWYKLPLNSILVIYDDADLALGRVRIRLSGSAGGHNGMRSI 125
Query: 136 MNNFRGNREFARLRIGIGRP-----PGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+++ G+ EF RLR+GI G D ++L F++ + + L V +
Sbjct: 126 ISH-GGSEEFPRLRVGIANEFRLNQKGPRDAVPYVLANFSSDDLKLLPDVLDLAVAAVTA 184
Query: 191 LLSKGLTESARHFN 204
+ +G+ +S +N
Sbjct: 185 CVQRGVEQSMNLYN 198
>gi|373859319|ref|ZP_09602049.1| peptidyl-tRNA hydrolase [Bacillus sp. 1NLA3E]
gi|372450988|gb|EHP24469.1| peptidyl-tRNA hydrolase [Bacillus sp. 1NLA3E]
Length = 186
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF +I+ +E I ++ K FG G V +LL KP
Sbjct: 3 LIVGLGNPGKQYENTRHN-IGFLVIEKLSEQLNIRLDQAKFKGIFGMGNVEGEKILLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSGES + YY++ + ++V +DD+ LP G +RLR G GGHNG+KS + +
Sbjct: 62 LTFMNLSGESIRVVMDYYQVQIEDLVVIYDDLDLPVGRIRLRQQGSAGGHNGIKSTIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G + F R+R+GI RP + ++L +F R ++ + + + L + +
Sbjct: 122 -GTQNFNRIRVGIDRPRTGTNVADYVLGRFTKDERVLMEDVIVKCSGACEQWLKRPFLQV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNEFNV 186
>gi|290967809|ref|ZP_06559362.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
gi|290782168|gb|EFD94743.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
Length = 188
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y+ T+HN GF +DA A G A +LL KP
Sbjct: 1 MIVGLGNPGREYENTKHN-TGFMTVDALAADMGADRWQQKMAALVASVSFRGETILLVKP 59
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG + GPL +YKL +V + +DDM LP G LR+R +G GGHNG+KS+ N
Sbjct: 60 QTYMNDSGRAVGPLMRWYKLAEPQVYIVYDDMDLPVGRLRIRKSGSDGGHNGIKSIFAN- 118
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R RIGIGRP Q +L F + V +K L G+ +
Sbjct: 119 -GCTEFIRFRIGIGRPLPQWSVVDHVLAPFTPDVLPAFQEGVAAAVAAIKGCLELGVDKG 177
Query: 200 ARHFNTIQK 208
FN +K
Sbjct: 178 MNRFNPKKK 186
>gi|418016904|ref|ZP_12656463.1| peptidyl-tRNA hydrolase [Streptococcus salivarius M18]
gi|345527597|gb|EGX30905.1| peptidyl-tRNA hydrolase [Streptococcus salivarius M18]
Length = 189
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ D V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNDEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPMEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------IARERIDTAL 181
G +EF R++IGIGRP M +L KF+ + ++++TAL
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETAL 171
>gi|347757712|ref|YP_004865274.1| peptidyl-tRNA hydrolase [Micavibrio aeruginosavorus ARL-13]
gi|347590230|gb|AEP09272.1| peptidyl-tRNA hydrolase [Micavibrio aeruginosavorus ARL-13]
Length = 196
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG KY RHN +GF IDA A+ G + +G +G V L K
Sbjct: 2 WLLVGLGNPGQKYADNRHN-IGFMAIDAIADKHGFPDFRTKFQGLLTEGRIGGEKVALLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMN SG + G A ++K+ NR++VFHD++ L LR++ GGH GHNGL+S+ ++
Sbjct: 61 PQTYMNESGMAVGAAAKFFKVTPNRIVVFHDELDLAASKLRIKVGGGHAGHNGLRSI-DS 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G ++ R+R+GIG P + +L F+ ++ +D ++ + + L+LS
Sbjct: 120 HLGRADYMRVRLGIGHPGDKDRVHGHVLGDFSKEEQKWVDAMMKSIPDHVGLILS 174
>gi|210634808|ref|ZP_03298314.1| hypothetical protein COLSTE_02241 [Collinsella stercoris DSM 13279]
gi|210158612|gb|EEA89583.1| aminoacyl-tRNA hydrolase [Collinsella stercoris DSM 13279]
Length = 209
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 14 AVARPW---LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG 70
A A+P + GLGNPGD+Y TRHN GF+ +D A G+S A V
Sbjct: 2 ATAQPLPIRMVAGLGNPGDEYADTRHN-AGFKAVDVLASQAGVSYWKNQAGAEVALINVN 60
Query: 71 DAP-------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHN 123
D V+L KPQ+YMN SG L A YK+ +LV HD++ +P G +R++
Sbjct: 61 DPEAEGGKREVVLVKPQSYMNTSGGPISKLCAQYKVKPEELLVIHDELDIPAGDVRVKVG 120
Query: 124 GGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQE 183
GGH GHNGL+S+++ G+R+F+R+R GIG PPG+M F+L++ + E +
Sbjct: 121 GGHAGHNGLRSIIDKL-GSRDFSRIRAGIGDPPGRMPVADFVLKQLRSREAEDFAVMTSQ 179
Query: 184 GVEVLKLLLSKGLTESARHFN 204
E L +++G+ + H N
Sbjct: 180 AAEAAALAITRGVVFARDHVN 200
>gi|149907585|ref|ZP_01896332.1| peptidyl-tRNA hydrolase [Moritella sp. PE36]
gi|149809255|gb|EDM69184.1| peptidyl-tRNA hydrolase [Moritella sp. PE36]
Length = 196
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 6/191 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGF---VGDAPVLL 76
L VGL NPG +Y TRHN G I+ A+ + FG V V L
Sbjct: 7 LIVGLANPGQEYSRTRHN-AGAWFINELAKWHNTQLR--EEAKYFGYTARIDVAGQDVRL 63
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
P T+MNLSG+S LA +Y++ + ++LV HD++ LP GV + + G HGGHNGLK ++
Sbjct: 64 LVPTTFMNLSGKSVSALAKFYRIDVTQILVVHDELDLPPGVAKFKQGGSHGGHNGLKDII 123
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+ ++EF RLRIGIG P + ++L K A +E++D A+ E V + +L G+
Sbjct: 124 SKMANSKEFYRLRIGIGHPGHKDKVTGYVLGKAQAKEQEQMDAAIDEAVRCIDILAKDGM 183
Query: 197 TESARHFNTIQ 207
T++ +T +
Sbjct: 184 TKAMTRLHTFK 194
>gi|296140893|ref|YP_003648136.1| peptidyl-tRNA hydrolase [Tsukamurella paurometabola DSM 20162]
gi|296029027|gb|ADG79797.1| peptidyl-tRNA hydrolase [Tsukamurella paurometabola DSM 20162]
Length = 194
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 120/196 (61%), Gaps = 8/196 (4%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPV 74
RP + VGLGNPG+KY GTRHN +GF+++D A S + H K A + PV
Sbjct: 4 RPLIVVGLGNPGEKYAGTRHN-IGFDVVDELATRARTSFSR-HKKSGAEVAGARLAGRPV 61
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
LAKPQ++MNLSG+ LA +Y + V+ HD++ + G++RL+ GG GGHNGL+S
Sbjct: 62 YLAKPQSFMNLSGQPVSALARFYSVEPTDVIAVHDELDIDFGLVRLKRGGGEGGHNGLRS 121
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ + G +++ R+R GIGRPPG+ DP ++L+ F + R + + + ++LL+S+
Sbjct: 122 LTQHL-GTKDYLRVRAGIGRPPGRQDPADYVLKPFASAERTEVPLLVTNAADAVELLISR 180
Query: 195 GLT-ESARHFNTIQKY 209
L ESA+ NT+ +
Sbjct: 181 DLDLESAQ--NTVHAW 194
>gi|89892925|ref|YP_516412.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense Y51]
gi|89332373|dbj|BAE81968.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 196
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y TRHN GF ++D AE + + + +G V L KP
Sbjct: 14 LIAGLGNPGGQYAETRHN-AGFLLLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKP 71
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S LA +YK+ ++V +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 72 QTFMNLSGRSIRELAQFYKIAPKDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIAEL 131
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F RL++GIGRP D ++L F ++ L +G++ + L +G ++
Sbjct: 132 -GTEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDKA 190
Query: 200 ARHFN 204
+N
Sbjct: 191 MNLYN 195
>gi|428775477|ref|YP_007167264.1| peptidyl-tRNA hydrolase [Halothece sp. PCC 7418]
gi|428689756|gb|AFZ43050.1| peptidyl-tRNA hydrolase [Halothece sp. PCC 7418]
Length = 193
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGD-APVLLA 77
L VGLGNPG+KY TRHN +GF+++D A+ + + K + +G V + L
Sbjct: 6 LIVGLGNPGEKYDKTRHN-IGFDVVDRLAKDWQLDWRDNNRFKGEYCEGAVPRMGKMRLL 64
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP TYMN SG++ + +YK VL+ +DD+ LP G LRLR +G GGHNG+KS+++
Sbjct: 65 KPNTYMNHSGQAVRAVCDWYKFSPESVLIIYDDLDLPVGRLRLRLSGSAGGHNGMKSIIS 124
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G +F RLRIGI + G D +L KF+ + ID AL+ EV++ L+ GL
Sbjct: 125 HL-GTDKFPRLRIGIKKTDGAKDTIGHVLGKFSPEEQPYIDEALKVAPEVVEKALTDGLE 183
Query: 198 ESARHFNT 205
++ +N
Sbjct: 184 KAMSLYNA 191
>gi|443674200|ref|ZP_21139237.1| Peptidyl-tRNA hydrolase [Rhodococcus sp. AW25M09]
gi|443413212|emb|CCQ17576.1| Peptidyl-tRNA hydrolase [Rhodococcus sp. AW25M09]
Length = 201
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 123/187 (65%), Gaps = 6/187 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFG--QGFVGDAPVL 75
P L VGLGNPG +Y+ TRHN VGF + DA A G + ++ H K+ Q +G V+
Sbjct: 14 PALIVGLGNPGPQYEKTRHN-VGFMVADALAGRIGGAFSS-HKKSNSDVVQARLGSRSVV 71
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+AKP+T+MNLSG+ LA ++ + ++V HD++ + G LRL+ GG GGHNGL+S+
Sbjct: 72 IAKPRTFMNLSGQPVAALARFFSIDPANIVVVHDELDIDFGSLRLKLGGGEGGHNGLRSI 131
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ +++ R+R+G+GRPPG+MDP +F+L+ F+A R+ + ++E + +LLLS G
Sbjct: 132 SQHL-STKDYLRVRVGVGRPPGRMDPASFVLKPFSAPERKDLGVVVEEAADAAELLLSAG 190
Query: 196 LTESARH 202
L E+A++
Sbjct: 191 L-ETAQN 196
>gi|425461201|ref|ZP_18840681.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9808]
gi|389826004|emb|CCI23853.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9808]
Length = 208
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAPVL 75
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD+P+L
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDSPLL 66
Query: 76 ----LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRAVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGKST-EKATISHVLGRFTPQENEVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|407648568|ref|YP_006812327.1| peptidyl-tRNA hydrolase [Nocardia brasiliensis ATCC 700358]
gi|407311452|gb|AFU05353.1| peptidyl-tRNA hydrolase [Nocardia brasiliensis ATCC 700358]
Length = 193
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 113/188 (60%), Gaps = 5/188 (2%)
Query: 11 FCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGF 68
+V P L VGLGNPG +Y+ TRHN VGF + D AE G VH K A Q
Sbjct: 1 MTDSVTGPALVVGLGNPGTEYERTRHN-VGFLVADVLAERVGGRFG-VHKKSGADLLQAR 58
Query: 69 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 128
+ VL+AKP+T+MNLSG LA ++ +P V+V HD++ LP G +RL+ GG GG
Sbjct: 59 LDGRQVLIAKPRTFMNLSGRPVAALAKFFSVPPTEVIVVHDELDLPFGEIRLKRGGGEGG 118
Query: 129 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
HNGL+SV + +++ R RIGIGRPPG+ DP ++L+ F R+ I +++ + +
Sbjct: 119 HNGLRSVSSAL-TTKDYLRTRIGIGRPPGRQDPADYVLKPFATPERKEIPVIVEQAADAV 177
Query: 189 KLLLSKGL 196
+LLL GL
Sbjct: 178 ELLLRVGL 185
>gi|298490956|ref|YP_003721133.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
gi|298232874|gb|ADI64010.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
Length = 209
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 113/195 (57%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVL 75
P L VGLGNP KY+ TRHN +GF IDA + I + + FG+G G +
Sbjct: 13 PQLIVGLGNPEPKYEQTRHN-IGFTAIDALSRPWQIPLAENRKFQGQFGEGTAPGGGKIG 71
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG S + ++YKLP VLV +DDM LP G RLR +G GGHNG+KS+
Sbjct: 72 LLKPLTYMNRSGHSVQAVRSWYKLPPESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSI 131
Query: 136 MNNFRGNREFARLRIGIGRPPG-----QMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+++ ++ F RL+IGIG+P G D + +L +F+A + + L+ +E ++L
Sbjct: 132 ISHL-SSQNFPRLKIGIGKPKGAANEDNTDTVSHVLGRFSATETKLMTLVLEFVIECVEL 190
Query: 191 LLSKGLTESARHFNT 205
L +G+ ++ N+
Sbjct: 191 TLKQGVEKAMNCCNS 205
>gi|385800629|ref|YP_005837033.1| peptidyl-tRNA hydrolase [Halanaerobium praevalens DSM 2228]
gi|309389993|gb|ADO77873.1| peptidyl-tRNA hydrolase [Halanaerobium praevalens DSM 2228]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG KY TRHN +GF +I+ A+ I+ ++ G F+G V++ +P
Sbjct: 3 VIAGLGNPGQKYAQTRHN-IGFMVINELAKRFKIN-SSYKFDGLIGDFFLGSEKVIIFQP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
YMN SG+ L Y+ + +LV HDD+ L G ++ + NG GGHNG+KS++NN
Sbjct: 61 LQYMNKSGQPIYKLLDYFNIESENLLVIHDDLDLDLGKIKFKQNGSSGGHNGIKSIINNL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF RL+IGIGRPP + F+L F + +++ + + + ++L+L + + ++
Sbjct: 121 -GTKEFKRLKIGIGRPPENVPVPDFVLTTFKSESKKIAEQTVAKAASAVELMLKEDIMKA 179
Query: 200 ARHFN 204
+N
Sbjct: 180 MNKYN 184
>gi|345851996|ref|ZP_08804953.1| peptidyl-tRNA hydrolase [Streptomyces zinciresistens K42]
gi|345636548|gb|EGX58098.1| peptidyl-tRNA hydrolase [Streptomyces zinciresistens K42]
Length = 200
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 109/200 (54%), Gaps = 9/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVG 70
T + PWL GLGNPG +Y RHN VGF + D AE G +A +G +G
Sbjct: 4 TTDPSAPWLIAGLGNPGPEYARNRHN-VGFMVADLLAERIGGKFKRAGKAQAQVVEGRIG 62
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
+ V+L KP YMNLSG L +YK+PL V+ HD++ + G LRL+ GG
Sbjct: 63 PPGPLNRRVVLVKPMAYMNLSGGPLNALRDFYKVPLEHVVAVHDELDIEYGTLRLKLGGG 122
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGLKS M G ++ R+R GIGRPPG+M F+L+ F+ R+ +D +
Sbjct: 123 DNGHNGLKS-MTKVMGA-DYHRVRFGIGRPPGRMQVADFVLRDFSVAERKELDYFVDRAA 180
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+ +GL + +N+
Sbjct: 181 DGVESLVIEGLERAQSTYNS 200
>gi|422735113|ref|ZP_16791393.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1341]
gi|315168149|gb|EFU12166.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1341]
Length = 188
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ + + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSIGPLLTYFGVDVEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT-- 197
G F R++IGIGRP +L F E + A+++ + L +G T
Sbjct: 122 -GTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFV 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 ETMNQFN 186
>gi|359424657|ref|ZP_09215769.1| peptidyl-tRNA hydrolase [Gordonia amarae NBRC 15530]
gi|358239954|dbj|GAB05351.1| peptidyl-tRNA hydrolase [Gordonia amarae NBRC 15530]
Length = 188
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG +Y+ TRHN VG ++DA S G VH K A + PVL+A
Sbjct: 3 LVVGLGNPGPQYEKTRHN-VGAMVVDALVASAGERWK-VHKKSGAQVATARLAGEPVLIA 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P TYMN +G GPLA +Y + ++V HD++ + G++RL+ GG GGHNGL+S+
Sbjct: 61 RPTTYMNTTGRQVGPLAKFYSVAPEDLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSISQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+ DP ++L+ F + A+ ++ + G E ++LL +GL
Sbjct: 121 AI-GTRDYLRVRLGIGRPPGRQDPADYVLKPFPSAAKADVELLIGNGAEAVELLARQGL- 178
Query: 198 ESARHFNTIQKY 209
E+A+ NT+ +
Sbjct: 179 EAAQ--NTVHAW 188
>gi|418069810|ref|ZP_12707087.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici MA18/5M]
gi|357536341|gb|EHJ20372.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici MA18/5M]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 98/174 (56%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y TRHN GF ++DA A+ G+ +H +A G+ F VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHN-TGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL YY L L ++V +DDM +P G +RLR G GGHNG+KS++ +
Sbjct: 62 TTYMNDSGRAVRPLMDYYDLALTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F RLR+GI P Q ++L +F + + +Q + L L+
Sbjct: 122 -GTEKFRRLRVGIEHPAHQ-KVVDYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|297616312|ref|YP_003701471.1| peptidyl-tRNA hydrolase [Syntrophothermus lipocalidus DSM 12680]
gi|297144149|gb|ADI00906.1| peptidyl-tRNA hydrolase [Syntrophothermus lipocalidus DSM 12680]
Length = 191
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+GTRHN +GF +++ G+ + V++AKP
Sbjct: 3 LVVGLGNPGKEYQGTRHN-LGFMVVEELVRRHGVKRQEYKHSSVMAWLECHGEEVVVAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG++ PL + KL L VLV DD+ L G +R+R GG GGH GL SV+++
Sbjct: 62 LTYMNRSGQAVKPLVSALKLNLEDVLVICDDLDLETGRIRIRPRGGSGGHRGLASVISSL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EFARLR+GIGRPP D ++L F A E + A+ + ++ + +G+ ++
Sbjct: 122 -GTEEFARLRVGIGRPPTGEDVIDYVLDGFTASETETMARAIARAADAVETWIGQGIEKA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNTYN 185
>gi|219666189|ref|YP_002456624.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
gi|423075769|ref|ZP_17064483.1| aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DP7]
gi|119390936|sp|Q251S4.2|PTH_DESHY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783865|sp|B8FZA5.1|PTH_DESHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219536449|gb|ACL18188.1| Aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
gi|361853181|gb|EHL05362.1| aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DP7]
Length = 185
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y TRHN GF ++D AE + + + +G V L KP
Sbjct: 3 LIAGLGNPGGQYAETRHN-AGFLLLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S LA +YK+ ++V +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 61 QTFMNLSGRSIRELAQFYKIAPKDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIAEL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F RL++GIGRP D ++L F ++ L +G++ + L +G ++
Sbjct: 121 -GTEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDKA 179
Query: 200 ARHFN 204
+N
Sbjct: 180 MNLYN 184
>gi|169824177|ref|YP_001691788.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
gi|238687728|sp|B0S0D9.1|PTH_FINM2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167830982|dbj|BAG07898.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
Length = 189
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG KY+ TRHN GF +ID A+ I +N + K+ G+GF+GD V+L K
Sbjct: 2 YLIAGLGNPGSKYEYTRHN-AGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGDEKVILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG++ YY L ++V DD+ +P G +R++ G G HNGLKS++
Sbjct: 61 PSTYMNDSGKAILDCFNYYNLSAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYL 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+++FAR+++ +G+ + D K F+L +F+ E ++ + + ++ + +
Sbjct: 121 IE-SQDFARIKVSVGQND-KYDLKDFVLSQFSKKEFEVLEKEIDMSSDAAIKIVEENVDY 178
Query: 199 SARHFN 204
+ +FN
Sbjct: 179 AMNNFN 184
>gi|326778824|ref|ZP_08238089.1| peptidyl-tRNA hydrolase [Streptomyces griseus XylebKG-1]
gi|326659157|gb|EGE44003.1| peptidyl-tRNA hydrolase [Streptomyces griseus XylebKG-1]
Length = 197
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH------CKATFGQGFVGD 71
PWL VGLGNPG Y RHN VGF + D A G + G G
Sbjct: 7 PWLIVGLGNPGPDYAANRHN-VGFMVADLLATRIGGKFKRAQKAQAQVVEGRMGPPGPGS 65
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+L KP +YMNLSG L +YK+P + V+ HD++ + G+LRL+ GG GHNG
Sbjct: 66 RRVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDVDYGMLRLKLGGGDNGHNG 125
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ L
Sbjct: 126 LKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECL 183
Query: 192 LSKGLTESARHFNT 205
L++GL + +N+
Sbjct: 184 LAEGLERAQSAYNS 197
>gi|169830289|ref|YP_001716271.1| aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
gi|238688211|sp|B1I197.1|PTH_DESAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169637133|gb|ACA58639.1| Aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
Length = 195
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY+ TRHN GF ++D A + G ++N C + G+G + V+LAKP
Sbjct: 3 LIVGLGNPGAKYRFTRHN-AGFMVVDRLAGAAGTTVNRRRCFSLVGEGRLNGVRVVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG + L +Y+L L +LV DD+ L G +RLR GG GGH GL S++
Sbjct: 62 QTYMNLSGLAVSALCRHYRLELADLLVICDDLDLEFGRIRLRPKGGSGGHRGLASIIAAL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ +F R+RIGIG+ D A +L +F + ++ L +GL E+
Sbjct: 122 -GSSDFPRVRIGIGKAE---DASAHVLGEFAPEDQSGLEEILSTAALAAACACREGLDEA 177
Query: 200 ARHFNT 205
FN+
Sbjct: 178 MSRFNS 183
>gi|319945977|ref|ZP_08020226.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|417919214|ref|ZP_12562751.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|319747785|gb|EFW00030.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|342834344|gb|EGU68618.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
Length = 189
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 108/193 (55%), Gaps = 12/193 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLL 76
L VGLGNPGDKY T+HN VGF ++D A+S ++ + H K A F+ V L
Sbjct: 4 LIVGLGNPGDKYVETKHN-VGFMLVDQLAKSLNLTFS--HDKIFQADVTSTFIDGEKVFL 60
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP T+MN SG++ L YY L + ++V +DD+ + G +RLR G GGHNG+KS++
Sbjct: 61 VKPTTFMNESGKAVHALLTYYGLEVEDLVVIYDDLDMEVGKIRLRTKGSAGGHNGIKSII 120
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ G + F R++IGIGRP M +L KF+ I A+ + E L+ L G
Sbjct: 121 NHI-GTQTFNRIKIGIGRPKQGMSVVHHVLGKFDQDDYATILLAIDKSEEALRFYLKDGQ 179
Query: 197 TESARHFNTIQKY 209
E T+Q+Y
Sbjct: 180 FEK-----TMQQY 187
>gi|297562916|ref|YP_003681890.1| peptidyl-tRNA hydrolase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847364|gb|ADH69384.1| peptidyl-tRNA hydrolase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 221
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 121/187 (64%), Gaps = 4/187 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG KY G RHN GF +++A A + + H + + + PV+LAK
Sbjct: 37 WLVVGLGNPGPKYAGNRHN-AGFLVVEALAGGERWKAHKAHAEVV--ETRLDGVPVVLAK 93
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+++MNLSG LA +YK+P+ R++V HD+M + G L+L+ GG GGHNGLKS+ ++
Sbjct: 94 PRSFMNLSGGPVSGLARFYKVPVERIVVVHDEMDIDFGALKLKKGGGPGGHNGLKSMTSS 153
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ ++ R+R G+GRPPG+MDP A++L+ F++ R +D ++ + ++ +L++GL
Sbjct: 154 LS-SPDYIRVRFGVGRPPGRMDPAAYVLKDFSSTERAELDLNVERAADAVRTVLTEGLGR 212
Query: 199 SARHFNT 205
+ ++T
Sbjct: 213 AQNIYHT 219
>gi|406837953|ref|ZP_11097547.1| peptidyl-tRNA hydrolase [Lactobacillus vini DSM 20605]
Length = 189
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGN G +Y+GTRHN GF ++D A+ G++ +A + +LLAKP
Sbjct: 3 LVVGLGNIGKEYEGTRHN-TGFMVLDHLAQQAGLTFTGPRQEAMIAKDHCYQQTILLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG S L YY L N +LV HDD+ LP G LRLR G GGHNG+KS++
Sbjct: 62 TTYMNESGRSVRALLNYYDLEPNDLLVVHDDLDLPTGQLRLRQKGSAGGHNGIKSIIAAV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL-SKGLTE 198
G + F R+RIGI P Q ++L +F+A + I + + + ++ L + +
Sbjct: 122 NG-QNFKRIRIGIDHPNKQT-VVDWVLSRFDAQQHDLITQGIDQAIAAIRFWLETDDFNQ 179
Query: 199 SARHFNTIQK 208
+ FN +K
Sbjct: 180 AMNRFNHKEK 189
>gi|403713195|ref|ZP_10939327.1| peptidyl-tRNA hydrolase [Kineosphaera limosa NBRC 100340]
gi|403212546|dbj|GAB94010.1| peptidyl-tRNA hydrolase [Kineosphaera limosa NBRC 100340]
Length = 196
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 116/194 (59%), Gaps = 9/194 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGD------- 71
WL VGLGNPG KY G RHN VG ++ A G++++ +A+ G +G
Sbjct: 4 WLVVGLGNPGPKYAGNRHN-VGAMVVAELARRGGVTLSRHKTRASAGSVRLGTAPGGAPG 62
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
P ++A P +YMN SG L YY P +R++V HD++ +P G +RL+ GG GGHNG
Sbjct: 63 PPAIVAVPSSYMNESGGPVSGLLQYYSCPTDRLVVVHDELDIPFGQVRLKRGGGEGGHNG 122
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
L+S+ N+ G R++ R+R+GIGRPPG+MD F+L+ F+ R+ + L + + +++L
Sbjct: 123 LRSISNSL-GTRDYLRVRVGIGRPPGRMDAADFVLRDFSPTDRKELPFLLDDAADAVEML 181
Query: 192 LSKGLTESARHFNT 205
GLT + + F+
Sbjct: 182 ADSGLTSAQQRFHA 195
>gi|225848301|ref|YP_002728464.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643316|gb|ACN98366.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 189
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 5/180 (2%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGF-VGDAPVLLAKP 79
+GLGNPG KYK TRHN VGF + DA A + I + + + F + D V++AKP
Sbjct: 5 IIGLGNPGQKYKDTRHN-VGFMVADAVA--KAIKCDNKYKEKDFSHIYECPDYDVIIAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG + L Y L + +LV HDD+ L G +RLR G GGHNGLKS++
Sbjct: 62 QTYMNLSGNAVLNLLEDYNLKPSEILVVHDDLDLNLGTIRLRTKGSSGGHNGLKSIIGMI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ EF RL+IGIGRP + + ++L F + +D + E + +L G+ +S
Sbjct: 122 K-TEEFPRLKIGIGRPARKEEVSDYVLSPFTKEEKFVLDKVIAASTECILNVLKYGIEKS 180
>gi|282898185|ref|ZP_06306176.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
gi|281196716|gb|EFA71621.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
Length = 213
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 113/198 (57%), Gaps = 12/198 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGF-VGDAPVL 75
P L VGLGNP KY TRHN +GF IDA + + I + + FG+G +G +
Sbjct: 13 PQLIVGLGNPDPKYDQTRHN-IGFAAIDALSRNWHIPVTENRKFQGQFGEGLALGSKKIR 71
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ KP TYMN SGES + ++YKLP VLV +DDM LP G RLR +G GGHNG+KS
Sbjct: 72 ILKPLTYMNRSGESIQAVTSWYKLPPESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKST 131
Query: 136 MNNFRGNREFARLRIGIGRP---PGQMDPK-----AFLLQKFNAIARERIDTALQEGVEV 187
+++ ++ F RLRIGIG+P P + + +L KF+ + ID L VE
Sbjct: 132 ISHLN-SQNFPRLRIGIGKPKNLPNNSNNDDGGTVSHVLGKFSPQEAKLIDPILAFVVEC 190
Query: 188 LKLLLSKGLTESARHFNT 205
++L L +G+ ++ N+
Sbjct: 191 VELTLKQGVEKAMNRCNS 208
>gi|345000160|ref|YP_004803014.1| peptidyl-tRNA hydrolase [Streptomyces sp. SirexAA-E]
gi|344315786|gb|AEN10474.1| peptidyl-tRNA hydrolase [Streptomyces sp. SirexAA-E]
Length = 197
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVG-----D 71
PWL VGLGNPG +Y RHN VGF + D A G +A +G VG
Sbjct: 7 PWLIVGLGNPGPEYAANRHN-VGFMVADLLATRIGGKFKRAQKAQAQVVEGRVGPPGPLS 65
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+L KP +YMNLSG L +YK+P + V+ HD++ + G LRL+ GG GHNG
Sbjct: 66 RRVVLVKPMSYMNLSGGPVTALRDFYKVPTDHVVAVHDELDIDYGTLRLKLGGGDNGHNG 125
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ ++ R+R GIGRPPG+M F+L+ F++ R+ + + + ++ L
Sbjct: 126 LKSMTKAM--GPDYHRVRFGIGRPPGRMQVADFVLKDFSSGERKELGYLVDRAADAVEAL 183
Query: 192 LSKGLTESARHFNT 205
+++GL + +N+
Sbjct: 184 VAEGLERAQSAYNS 197
>gi|147791610|emb|CAN77398.1| hypothetical protein VITISV_043931 [Vitis vinifera]
Length = 301
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 90/165 (54%), Gaps = 45/165 (27%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY TRHN + C + G +G+ P+LLA
Sbjct: 51 PWLIVGLGNPGNKYHETRHNII--------------------CVTSTGS--IGEVPILLA 88
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG------ 131
KPQ YMN SGES +D+M LP GVLRL GGHG HNG
Sbjct: 89 KPQAYMNFSGESV-----------------YDEMNLPNGVLRLAPRGGHGYHNGYIYNNT 131
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARER 176
LK+VM + G REF RL IGIG PPG MD KA+LLQKF+ R++
Sbjct: 132 LKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQ 176
>gi|406667824|ref|ZP_11075576.1| Peptidyl-tRNA hydrolase [Bacillus isronensis B3W22]
gi|405384339|gb|EKB43786.1| Peptidyl-tRNA hydrolase [Bacillus isronensis B3W22]
Length = 191
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG Y+ TRHN +GF++ID A +N + + V+L KP
Sbjct: 7 LIIGLGNPGKPYEHTRHN-IGFDVIDELANRWNAPLNQTKFNGMYATVHRPEGKVILLKP 65
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL Y+ + + ++V +DD+ L G LRLR G GGHNG+KS++ +
Sbjct: 66 LTYMNLSGECVRPLMDYFDIEIEDIIVIYDDLDLETGKLRLRGKGSAGGHNGIKSLIQHL 125
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+G+ RPP M ++L KF+ + + A+++ + ++ L+K E
Sbjct: 126 -GTQEFNRIRVGVSRPPAGMKVADYVLAKFSKEDQPIVKEAVEKSCDAVETALTKPFLEV 184
Query: 200 ARHFN 204
FN
Sbjct: 185 MNKFN 189
>gi|392963302|ref|ZP_10328728.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans DSM 17108]
gi|392451126|gb|EIW28120.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans DSM 17108]
Length = 185
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN +GF ++D A+ GI +A + + G+ +LL KP
Sbjct: 3 IVVGLGNPGQQYSATRHN-IGFMVVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG + G LA +YK+ + +++ DDM LP G LRLR GG GGH G++S++ +
Sbjct: 61 QTYMNLSGVAVGELARWYKVAVEDIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ F R+R+GIGRPP ++L F A + + +A+++ + + +L +G+ ++
Sbjct: 121 SKD-SFPRVRVGIGRPPAGWQVVDYVLSSFTAEEQPLVKSAIEKAADATESILEQGMNKA 179
>gi|304385534|ref|ZP_07367878.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
gi|304328038|gb|EFL95260.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
Length = 185
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 98/174 (56%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y TRHN GF ++DA A+ G+ +H +A G+ F VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHN-TGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL YY L L ++V +DDM +P G +RLR G GGHNG+KS++ +
Sbjct: 62 TTYMNDSGRAVRPLMDYYDLALTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F RLR+GI P Q ++L +F + + +Q + L L+
Sbjct: 122 -GTEKFRRLRVGIEHPAHQ-KVVDYVLGRFTKEQKADFEIGVQNAIAALDDWLA 173
>gi|335424593|ref|ZP_08553601.1| peptidyl-tRNA hydrolase [Salinisphaera shabanensis E1L3A]
gi|334888931|gb|EGM27226.1| peptidyl-tRNA hydrolase [Salinisphaera shabanensis E1L3A]
Length = 196
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 4/185 (2%)
Query: 22 VGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLAKPQ 80
V LGNPG + RHN VGF + D AE ++ ++ K + +G+A V L KP
Sbjct: 9 VALGNPGADHASDRHN-VGFWLADRLAERWRVAFSSERKFKGDLARRGMGEASVWLLKPA 67
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T+MN SG++ PL A++KL VLV HD++ LP G R + +GGHGGHNGL+ +
Sbjct: 68 TFMNRSGDAVQPLCAFHKLAPESVLVVHDELDLPAGTARFKQSGGHGGHNGLRDITRVI- 126
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
++ RLRIGIG P + +++L + R ID A+ G++ L++ L KG A
Sbjct: 127 -GTQYKRLRIGIGHPGDRSQVLSYVLGTPSPDDRIEIDNAIDAGIDALEIALDKGWDYGA 185
Query: 201 RHFNT 205
+ N+
Sbjct: 186 QKLNS 190
>gi|320335350|ref|YP_004172061.1| peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
gi|319756639|gb|ADV68396.1| Peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
Length = 203
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN VG+ ++D A G + A + +G VLL KP
Sbjct: 3 VVVGLGNPGAQYALTRHN-VGWLVVDEVARRAGATWRK-DRDAEVTEVRLGTEKVLLVKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG + PL +YKL +LV DD+ P G+++ R G HGG NG++ ++
Sbjct: 61 QTFMNSSGRAVAPLMTFYKLDGAHLLVVQDDLDSPFGLMKFRLGGRHGGQNGVRDIITRL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F RL++GI RPP DP ++L K+ R +D ++ G ++ + GL E+
Sbjct: 121 -GTDAFPRLKLGISRPPTGWDPAGWVLSKWRDEERTTVDELVRLGANAVEAWATLGLLEA 179
Query: 200 ARHFN 204
FN
Sbjct: 180 QARFN 184
>gi|427718430|ref|YP_007066424.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 7507]
gi|427350866|gb|AFY33590.1| peptidyl-tRNA hydrolase [Calothrix sp. PCC 7507]
Length = 213
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 113/198 (57%), Gaps = 15/198 (7%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPV-- 74
P L VGLGNP KY TRHN +GF +DA + + I + + FG+G AP+
Sbjct: 13 PQLIVGLGNPEPKYNQTRHN-IGFAAVDALSRTWQIPLAENRKFQGEFGEGI---APIGG 68
Query: 75 --LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
L KP TYMN SG++ + ++YKLP VL+ +DDM LP G RLR +G GGHNG+
Sbjct: 69 KIRLLKPSTYMNRSGQAIQAVTSWYKLPPESVLIIYDDMDLPLGKTRLRLSGSAGGHNGM 128
Query: 133 KSVMNNFRGNREFARLRIGIGRPPG-----QMDPKAFLLQKFNAIARERIDTALQEGVEV 187
KS + + ++F RLRIGIG+P G + + +L +F++ + + LQ VE
Sbjct: 129 KSAIAHL-STQDFPRLRIGIGKPKGAGNVEESGTVSHVLGRFSSTETQLMSLVLQFVVEC 187
Query: 188 LKLLLSKGLTESARHFNT 205
++L L +G+ ++ N+
Sbjct: 188 IELSLKQGVEKAMNRCNS 205
>gi|227548220|ref|ZP_03978269.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079694|gb|EEI17657.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
Length = 200
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC- 60
L R + G A WL VGLGNPG++Y TRHN VG+ +D G+++ H
Sbjct: 4 LFRRLIGTGNRGNDAAQWLVVGLGNPGEEYAKTRHN-VGWMALDRLLSHGGVTLRQDHAV 62
Query: 61 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 120
KA V D + A+P TYMN SG + GPLAA +P RV+V HD++ LP G +RL
Sbjct: 63 KALVA---VKDG-IAYARPLTYMNESGAAVGPLAARLNVPAERVIVLHDELDLPPGRVRL 118
Query: 121 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
R G GHNGLKS+ + G R++ R+RIGIGRPPG ++L + A
Sbjct: 119 RRGGSENGHNGLKSLSEHL-GTRDYVRVRIGIGRPPGGTAVPDWVLSAVTGDVSAETEKA 177
Query: 181 LQEGVEVLKLLLSKGLTES 199
Q +L++ GL +
Sbjct: 178 AQAA----RLVIVDGLERA 192
>gi|357040090|ref|ZP_09101880.1| Peptidyl-tRNA hydrolase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357070|gb|EHG04849.1| Peptidyl-tRNA hydrolase [Desulfotomaculum gibsoniae DSM 7213]
Length = 191
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY TRHN GF +D AE ++ ++ GQG ++LAKP
Sbjct: 3 LVVGLGNPGSKYALTRHNA-GFMAVDRLAERLDTPVDRNFLRSLVGQGVWAGEKIILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L +YKL ++V +DD+ LP G LR+R G GGH GL S++ N
Sbjct: 62 QTYMNLSGQAVVALLNWYKLAPADLIVIYDDLDLPPGRLRIRDRGSAGGHRGLASII-NL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R+RIGIGRPP A ++L + + E I L+ V++ ++ G+
Sbjct: 121 LGTGDFIRVRIGIGRPPVPGPEVADWVLARPASEDMEAIHRVLETVPGVVEEIVRAGVVS 180
Query: 199 SARHFN 204
+ FN
Sbjct: 181 AMNKFN 186
>gi|410582392|ref|ZP_11319498.1| peptidyl-tRNA hydrolase [Thermaerobacter subterraneus DSM 13965]
gi|410505212|gb|EKP94721.1| peptidyl-tRNA hydrolase [Thermaerobacter subterraneus DSM 13965]
Length = 208
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 93/152 (61%), Gaps = 2/152 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
P + VGLGNPG +Y+GTRHN VGF ++DA A + ++ + +G PV+L
Sbjct: 2 PRIIVGLGNPGPEYEGTRHN-VGFAVVDALARRLRTAGWRRGFRSLWAEGTWRGQPVVLL 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMNLSGE+ ++P VLV +DD+ LP G LRLR G GGH G+ S++
Sbjct: 61 KPQTYMNLSGEAVAQACRNLRVPPGEVLVIYDDLDLPPGHLRLRPRGSAGGHRGVASIIA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 169
+ G +F RLR+GIGRPP +D ++L F
Sbjct: 121 SL-GRDDFPRLRVGIGRPPAGVDAADYVLAPF 151
>gi|373464508|ref|ZP_09556045.1| aminoacyl-tRNA hydrolase [Lactobacillus kisonensis F0435]
gi|371762363|gb|EHO50897.1| aminoacyl-tRNA hydrolase [Lactobacillus kisonensis F0435]
Length = 186
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y TRHN GF +++ FA++ GI++ T A +G GF+ + V++ +P
Sbjct: 3 MIVGLGNIGPQYDRTRHN-TGFMVVEQFAQAHGINIKTRKMNAKYGSGFINNEKVIVVEP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + PL Y+ +P+ + + HDDM LP G +R++ G GGHNG+KS++ N
Sbjct: 62 TTFMNDSGIAVKPLMDYFDIPVENIAIVHDDMDLPVGKIRVKDKGSAGGHNGIKSIIYNL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F R+R+G G P ++L +F+ A V L + GLT S
Sbjct: 122 -GTENFTRVRVGTGHPDKANSVVNYVLGRFSKDQVPVFKQAADHAVNALDDWVD-GLTIS 179
>gi|354568542|ref|ZP_08987706.1| Peptidyl-tRNA hydrolase [Fischerella sp. JSC-11]
gi|353540265|gb|EHC09742.1| Peptidyl-tRNA hydrolase [Fischerella sp. JSC-11]
Length = 216
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 110/199 (55%), Gaps = 8/199 (4%)
Query: 13 TAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-G 70
T + P L VGLGNP KY TRHN +GF +D + S I + + +G+G
Sbjct: 8 TTLVIPQLIVGLGNPEPKYDQTRHN-IGFAALDVLSRSWQIPLAENRKFQGEYGEGIAPT 66
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
+ + L KP TYMN SG++ + +YKLP VLV +DDM LP G RLR +G GGHN
Sbjct: 67 NDKIRLLKPLTYMNRSGQAIQAVTNWYKLPPESVLVIYDDMDLPLGKTRLRLSGSAGGHN 126
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQM----DPKAFLLQKFNAIARERIDTALQEGVE 186
G+KS + + G + F RLRIGIGRP G + +++L KF+ + + L E
Sbjct: 127 GMKSAIAHL-GTQNFPRLRIGIGRPKGATNGDENTVSYVLGKFSTTETKFVSEVLNFVCE 185
Query: 187 VLKLLLSKGLTESARHFNT 205
++L L +G+ ++ N+
Sbjct: 186 CVELCLKQGVEKAMNRCNS 204
>gi|409392938|ref|ZP_11244452.1| peptidyl-tRNA hydrolase [Gordonia rubripertincta NBRC 101908]
gi|403197238|dbj|GAB87686.1| peptidyl-tRNA hydrolase [Gordonia rubripertincta NBRC 101908]
Length = 189
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 121/192 (63%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
+ VGLGNPG KY+ TRHN VG + D +S G VH K A + +G VL+A
Sbjct: 4 IVVGLGNPGSKYEKTRHN-VGAMVADGLVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVA 61
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+ YMN SG GPLA +Y + ++V HD++ + G++RL+ GG GGHNGL+S+ +
Sbjct: 62 KPRVYMNESGRQIGPLAKFYSVAPTDLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSI-S 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+ DP F+L+ F + R ++ ++ G + ++LL+S+ L
Sbjct: 121 QVMGTRDYLRVRMGIGRPPGRQDPADFVLKPFPSADRAEVELMIRNGCDAVELLVSQDL- 179
Query: 198 ESARHFNTIQKY 209
ESA+ NT+ +
Sbjct: 180 ESAQ--NTVHAW 189
>gi|422698802|ref|ZP_16756687.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1346]
gi|315172644|gb|EFU16661.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1346]
Length = 188
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q IS N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNISFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT-- 197
G F R++IGIGRP +L F E + A+++ + L +G T
Sbjct: 122 -GTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFV 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 ETMNQFN 186
>gi|346311930|ref|ZP_08853928.1| peptidyl-tRNA hydrolase [Collinsella tanakaei YIT 12063]
gi|345899667|gb|EGX69506.1| peptidyl-tRNA hydrolase [Collinsella tanakaei YIT 12063]
Length = 209
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 13/194 (6%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGIS---------MNTVHCKATFGQGFVG 70
+ GLGNPG++YK TRHN GF+ ID A G++ + T+ +G G
Sbjct: 11 MVAGLGNPGEEYKDTRHN-AGFKAIDELARQAGVTYWKNQLGAEVATIQVHDPEAEG--G 67
Query: 71 DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHN 130
VLL KPQ++MN SG L A K+ + +LV HD++ +P G +R++ GGH GHN
Sbjct: 68 RREVLLVKPQSFMNTSGGPISKLCAQNKITVEELLVIHDELDIPEGDVRVKVGGGHAGHN 127
Query: 131 GLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
GL+S+++ G+R+F+R+R GIG PPG+M F+L++F E + + L
Sbjct: 128 GLRSIIDKM-GSRDFSRIRTGIGNPPGRMAVADFVLKQFRPKELEDFENTCARAADAAGL 186
Query: 191 LLSKGLTESARHFN 204
L++G+ + H N
Sbjct: 187 ALTQGVVYARDHVN 200
>gi|160914797|ref|ZP_02077011.1| hypothetical protein EUBDOL_00804 [Eubacterium dolichum DSM 3991]
gi|158433337|gb|EDP11626.1| aminoacyl-tRNA hydrolase [Eubacterium dolichum DSM 3991]
Length = 186
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN GF ++DA A+ + +N KA Q +G VLL KP
Sbjct: 3 LIVGLGNPGKEYENTRHNS-GFCVMDAIAKECNVEINQKKFKALVAQTRIGKESVLLMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGE+ +Y + + +LV +DD+ LP G +RLR G GG NG+K+++ +
Sbjct: 62 QTYMNLSGEALIQAVNFYHIDIKDILVIYDDLDLPVGKIRLREKGSAGGQNGMKNIIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+EF R+R+GIG+ ++ ++L K +E + A+++ + S ++
Sbjct: 122 H-TQEFNRIRVGIGK-DARVPVIDWVLGKIRKEEQEAYEQAIKQACDAAIYSCSHSFIDT 179
Query: 200 ARHFN 204
+N
Sbjct: 180 MSAYN 184
>gi|94971564|ref|YP_593612.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
gi|94553614|gb|ABF43538.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
Length = 228
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ T HN +GF +D AE GI + +CKA G+G + V+LAKP
Sbjct: 30 LIVGLGNPGMQYQFTPHN-LGFLAVDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAKP 88
Query: 80 QTYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
+TYMNLSG S L + ++ + ++V +DD+ LP G +R+R G GGHNG++S++
Sbjct: 89 ETYMNLSGASVQELVSELEIDGTKDMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIGA 148
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+EF R+RIGI D +++L + +D AL + E +K++L +G
Sbjct: 149 L-DTQEFLRIRIGIAPEFKLSDGASYVLSQLKKSQLPVVDQALDDAAEAVKVILREGPGP 207
Query: 199 SARHFN 204
+ FN
Sbjct: 208 AMNRFN 213
>gi|312128224|ref|YP_003993098.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
gi|311778243|gb|ADQ07729.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
Length = 189
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG+KY TRHN GF ID A+ ++ + K G VLL K
Sbjct: 3 YIIAGLGNPGEKYTFTRHN-AGFLAIDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SGES +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 62 PMTYMNASGESIIEAVNFYKIKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF R+RIGIG P + D ++L +F +E+I A+++ +K+LL +
Sbjct: 122 L-GTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDMDR 178
Query: 199 SARHFN 204
+ + N
Sbjct: 179 AMNYIN 184
>gi|75910645|ref|YP_324941.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
gi|119390911|sp|Q3M4P0.1|PTH_ANAVT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|75704370|gb|ABA24046.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
Length = 213
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 113/199 (56%), Gaps = 9/199 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GD 71
A+ P L VGLGNP KY TRHN +GF +DA A + IS+ + +G+G G
Sbjct: 9 ALVIPQLIVGLGNPEPKYDQTRHN-IGFAAVDALARAWNISLAENRKFQGQYGEGTAPGG 67
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KP TYMN SG++ + ++YKL VLV +DD+ LP G RLR +G GGHNG
Sbjct: 68 VKIRLLKPLTYMNRSGQAIQAVTSWYKLSGESVLVIYDDLDLPLGKTRLRLSGSAGGHNG 127
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQM-----DPKAFLLQKFNAIARERIDTALQEGVE 186
+KS + + + F RLRIGIG+P + + + +L KF+A + + LQ VE
Sbjct: 128 MKSAIAHL-STQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVE 186
Query: 187 VLKLLLSKGLTESARHFNT 205
++L L +G+ ++ N+
Sbjct: 187 CVELSLKQGVEKAMNRCNS 205
>gi|270290198|ref|ZP_06196424.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
gi|270281735|gb|EFA27567.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
Length = 185
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 3/169 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y TRHN GF ++DA A+ G+ +H +A G+ F VLL KP
Sbjct: 3 MIVGLGNIGKEYDQTRHN-TGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL YY L L ++V +DDM +P G +RLR G GGHNG+KS++ +
Sbjct: 62 TTYMNDSGRAVRPLMDYYDLALTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
G +F RLR+GI P Q ++L +F + + +Q + L
Sbjct: 122 -GTEKFRRLRVGIEHPAHQ-KVVDYVLGRFTKEQKADFEIGVQNAIAAL 168
>gi|425439499|ref|ZP_18819821.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9717]
gi|389720261|emb|CCH96014.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9717]
Length = 208
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 111/193 (57%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD+P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDSPLP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRAVLDWYKLEPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 127 IKSMIAHV-GTESFARLRIGIGK-SSEKATISHVLGRFTPQENEVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|312134558|ref|YP_004001896.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
gi|311774609|gb|ADQ04096.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
Length = 189
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPGD+Y TRHN GF ID A+ ++ + K G VLL K
Sbjct: 3 YIIAGLGNPGDRYTFTRHN-AGFLTIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SGES +YK+ +++V +DD+ G++++R G GGHNG+KS++
Sbjct: 62 PMTYMNASGESIKEAVNFYKIKPEKLIVIYDDIAFDVGIVKMRKKGSDGGHNGVKSIIQC 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF R+RIGIG P + D ++L +F +E+I A+++ +K+LL +
Sbjct: 122 L-GTEEFPRIRIGIGIP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDR 178
Query: 199 SARHFN 204
+ + N
Sbjct: 179 AMNYIN 184
>gi|425433736|ref|ZP_18814214.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9432]
gi|389675713|emb|CCH95215.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9432]
Length = 208
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 112/193 (58%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD+P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDSPLP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRAVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G +FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 127 IKSMIAHV-GTEKFARLRIGIGK-SSEKATISHVLGRFTPQENEVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|293388110|ref|ZP_06632637.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
gi|291082486|gb|EFE19449.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
Length = 188
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSVGPLLTYFGADEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT-- 197
G F R++IGIGRP +L F E I A+++ + L +G T
Sbjct: 122 -GTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEILLAVKKAADA-ALYACEGHTFV 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 ETMNQFN 186
>gi|420146319|ref|ZP_14653745.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398401981|gb|EJN55386.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 188
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 3/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ T+HN VGF ID A + ++ + +A + F D V L KP
Sbjct: 3 MIVGLGNPGKKYEQTKHN-VGFMTIDRMAAAHQVTFSHNQFEANYATYFENDEKVYLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG + PL YY++ L ++V +DDM L G LRLR +G GGHNG+KS++ +F
Sbjct: 62 QTFMNDSGRAVKPLMTYYQIQLAELMVVYDDMDLVPGRLRLREHGSAGGHNGIKSLI-SF 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
+F R+RIG G P + ++L F+ A+ +D ++ +E L+
Sbjct: 121 LQTSDFNRVRIGTGHPE-RRSVVDWVLSPFSDEAQPLVDRSIDTAIEALE 169
>gi|392972512|ref|ZP_10337901.1| peptidyl-tRNA hydrolase [Staphylococcus equorum subsp. equorum Mu2]
gi|403047727|ref|ZP_10903185.1| peptidyl-tRNA hydrolase [Staphylococcus sp. OJ82]
gi|392509485|emb|CCI61208.1| peptidyl-tRNA hydrolase [Staphylococcus equorum subsp. equorum Mu2]
gi|402762468|gb|EJX16572.1| peptidyl-tRNA hydrolase [Staphylococcus sp. OJ82]
Length = 190
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ T+HN +GFE+ID + S++ K + +G V+ +P
Sbjct: 4 IVGLGNIGKRFEQTKHN-IGFEVIDYMLDQNQFSLDKQKFKGAYTIERIGGEKVMFIEPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ GPL YY + ++ ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TMMNLSGEAVGPLMKYYDIDIDDLVVLYDDLDLPQGEIRLRQKGSAGGHNGIKSMIQVL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+RIG+ RP M ++LQKF+ + ++ ++ ++ + ES+
Sbjct: 122 GTDQFKRIRIGVDRPSNGMSIVDYVLQKFSKQEMQIMNKVIEHSARAVEAYI-----ESS 176
Query: 201 RHFNTIQKY 209
R + +Y
Sbjct: 177 RFDRVMNEY 185
>gi|327399266|ref|YP_004340135.1| peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
gi|327181895|gb|AEA34076.1| Peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
Length = 193
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 114/191 (59%), Gaps = 6/191 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFVGDAPVLLA 77
WL VGLGNPG +Y T HN VGF + D+ + + K FG+ +G V +
Sbjct: 3 WLVVGLGNPGKEYALTPHN-VGFMVCDSLSFLFDFDFTLKNKFKGFFGEFSLGSYKVGVL 61
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP TYMNLSG S G + ++YK+PLNR++V HDD+ LP G ++++ N GGH G++S++
Sbjct: 62 KPITYMNLSGISVGEVFSFYKIPLNRLIVIHDDVDLPLGRIKIKKNSSSGGHKGVESIIQ 121
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+++FAR++IG+GR D ++L+ F E ++ A++ + + ++ +GL
Sbjct: 122 TL-SSKDFARVKIGVGREGNVRD---YVLRNFKENELEIVNQAVRLSADAVVCIIKEGLN 177
Query: 198 ESARHFNTIQK 208
++ +N++ +
Sbjct: 178 KAMNEYNSLNR 188
>gi|119390906|sp|Q1IHW2.2|PTH_ACIBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 201
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ T HN +GF +D AE GI + +CKA G+G + V+LAKP
Sbjct: 3 LIVGLGNPGMQYQFTPHN-LGFLAVDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNR-VLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
+TYMNLSG S L + ++ + ++V +DD+ LP G +R+R G GGHNG++S++
Sbjct: 62 ETYMNLSGASVQELVSELEIDGTKDMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIGA 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+EF R+RIGI D +++L + +D AL + E +K++L +G
Sbjct: 122 LD-TQEFLRIRIGIAPEFKLSDGASYVLSQLKKSQLPVVDQALDDAAEAVKVILREGPGP 180
Query: 199 SARHFN 204
+ FN
Sbjct: 181 AMNRFN 186
>gi|434393133|ref|YP_007128080.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 7428]
gi|428264974|gb|AFZ30920.1| peptidyl-tRNA hydrolase [Gloeocapsa sp. PCC 7428]
Length = 212
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 115/199 (57%), Gaps = 8/199 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGD- 71
+V P L VGLGNP KY+ TRHN +GF +DA A S + ++ + FG+G +
Sbjct: 8 SVVIPQLIVGLGNPEPKYEQTRHN-IGFAAVDALARSWKMPLSENRKFQGEFGEGVSPNR 66
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KP TYMN SG++ + ++KLP +LV +DDM LP G +RLR +G GGHNG
Sbjct: 67 EKIRLLKPLTYMNNSGQAIRAVVDWFKLPPESILVIYDDMDLPVGKIRLRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPK----AFLLQKFNAIARERIDTALQEGVEV 187
+KS + + G + F RLRIGIG+P + + +L +F+ + + L V+
Sbjct: 127 MKSAIAHL-GTQNFPRLRIGIGKPEQAVSNNGKTISHVLGRFSPTENQVVTKLLPLVVDC 185
Query: 188 LKLLLSKGLTESARHFNTI 206
++L L +G+ ++ +NT+
Sbjct: 186 VELCLKQGVEKAMNRYNTV 204
>gi|89073086|ref|ZP_01159625.1| peptidyl-tRNA hydrolase [Photobacterium sp. SKA34]
gi|89051039|gb|EAR56496.1| peptidyl-tRNA hydrolase [Photobacterium sp. SKA34]
Length = 196
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAK 78
L VGL NPG +Y TRHN G +++ A +++ G+ V + L
Sbjct: 7 LLVGLANPGQEYANTRHN-AGAWVVEELARVHNVTLRPDPKYFGLTGRITVNGQDLRLLI 65
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG+S LA ++++ +LV HD++ LP GV + + +GGHGGHNGL+ ++N
Sbjct: 66 PSTFMNLSGKSVAALANFFQIKPEEILVAHDELDLPPGVAKFKKSGGHGGHNGLRDIINK 125
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
N++F RLRI IG P + ++L K A +E ID A+ E V + +LL GLT+
Sbjct: 126 MGNNKDFYRLRIAIGHPGDKNRVAGYVLGKAPAKEQELIDAAVDESVRCIDILLKDGLTK 185
Query: 199 SARHFNTIQ 207
+ +T +
Sbjct: 186 AQNRLHTFK 194
>gi|289551699|ref|YP_003472603.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315660331|ref|ZP_07913184.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
gi|385785246|ref|YP_005761419.1| putative peptidyl-tRNA hydrolase [Staphylococcus lugdunensis
N920143]
gi|418416035|ref|ZP_12989237.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635169|ref|ZP_13197553.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis VCU139]
gi|289181230|gb|ADC88475.1| Peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315494620|gb|EFU82962.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
gi|339895502|emb|CCB54831.1| putative peptidyl-tRNA hydrolase [Staphylococcus lugdunensis
N920143]
gi|374842118|gb|EHS05565.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis VCU139]
gi|410872945|gb|EKS20882.1| peptidyl-tRNA hydrolase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 190
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ TRHN +GFE++D + +++ K + +G+ V+ +P
Sbjct: 4 IVGLGNIGKRFEHTRHN-IGFEVVDYLLDKYNFNLDKQKFKGAYTIERIGNDKVMFIEPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSG++ GPL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TMMNLSGQAVGPLMDYYNVAIDELIVLYDDLDLNQGQVRLRQKGSAGGHNGMKSIIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F R+RIG+GRP M ++LQKF+ +D ++ + ++ +
Sbjct: 122 GTEQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMMTMDHVVEHAAQAVEAFID 174
>gi|296118211|ref|ZP_06836792.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
gi|295968769|gb|EFG82013.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
Length = 220
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 113/223 (50%), Gaps = 23/223 (10%)
Query: 2 LINRFL-----RRGFCTAVARP----------WLFVGLGNPGDKYKGTRHNQVGFEMIDA 46
++NRF R G CT AR WL VGLGNPG KY TRHN VG+ ID
Sbjct: 3 VLNRFFDLFRSRSGSCTQSARDTSVELPATADWLVVGLGNPGAKYAATRHN-VGYMAIDD 61
Query: 47 FAESQGISMNTVHCKATFGQGF-VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVL 105
G + VH + V+LA+P T+MNLSGE+ GP+A + +R++
Sbjct: 62 LLAETGDLVQPVHGHKLLAATVEIAGHTVVLARPTTFMNLSGEAIGPVAEKLGISADRII 121
Query: 106 VFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFL 165
HD++ LP +RL+ G GHNGLKS+ + G R++ R+RIGI RPP ++
Sbjct: 122 AVHDELDLPENKIRLKLGGNENGHNGLKSLTQHL-GTRDYLRVRIGIARPPKGSSIPDYV 180
Query: 166 LQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNTIQK 208
L N A D ++ +K ++S GL ++ NTI
Sbjct: 181 LAPVN--AGPGFDQSIALAASGVKEIISSGLNKAQ---NTIHS 218
>gi|70727508|ref|YP_254424.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
gi|119391015|sp|Q4L3F9.1|PTH_STAHJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68448234|dbj|BAE05818.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
Length = 190
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ TRHN +GFE+ID + S++ K + + VL +P
Sbjct: 4 IVGLGNIGKRFELTRHN-IGFEVIDYILKKHNFSLDKQKFKGAYTIERLNGDKVLFIEPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ GPL YY + + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 63 TMMNLSGEAVGPLMDYYNVEVEDLIVLYDDLDLSQGQIRLRQKGSAGGHNGMKSIIKHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+RIG+GRP M ++LQKF+ +D ++ ++ + ES+
Sbjct: 122 GTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMITMDKVIEHSAHAVEAFI-----ESS 176
Query: 201 RHFNTIQKY 209
R + + +Y
Sbjct: 177 RFDHVMNQY 185
>gi|421056860|ref|ZP_15519777.1| peptidyl-tRNA hydrolase [Pelosinus fermentans B4]
gi|421057209|ref|ZP_15520081.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans B3]
gi|421064964|ref|ZP_15526779.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A12]
gi|421069319|ref|ZP_15530491.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A11]
gi|392438040|gb|EIW15902.1| peptidyl-tRNA hydrolase [Pelosinus fermentans B4]
gi|392450339|gb|EIW27392.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A11]
gi|392459996|gb|EIW36351.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans A12]
gi|392463575|gb|EIW39493.1| Peptidyl-tRNA hydrolase [Pelosinus fermentans B3]
Length = 185
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN +GF ++D A+ GI +A + + G+ +LL KP
Sbjct: 3 IVVGLGNPGRQYSATRHN-IGFMVVDELAQRLGIDRWRNQKEALVAE-YKGNDTILLVKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG + G LA +YK+ + +++ DDM LP G LRLR GG GGH G++S++ +
Sbjct: 61 QTYMNLSGVAVGELARWYKVAVEDIIIIFDDMDLPTGRLRLRMKGGSGGHRGIESLLTHL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ F R+R+GIGRPP ++L F A + + +A+++ + + +L +G+ ++
Sbjct: 121 SKD-SFPRVRVGIGRPPAGWQVVDYVLSSFTAEEQPLVKSAIEKAADATESILEQGMNKA 179
>gi|406658908|ref|ZP_11067048.1| aminoacyl-tRNA hydrolase [Streptococcus iniae 9117]
gi|405579123|gb|EKB53237.1| aminoacyl-tRNA hydrolase [Streptococcus iniae 9117]
Length = 189
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAK 78
+ VGLGNPG KY T+HN +GF ID A+ GI+ + KA G F+ + L K
Sbjct: 4 MIVGLGNPGSKYDNTKHN-IGFTAIDQMAKKHGINFTEEKNFKALIGSTFINHEKIYLVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SG S L YY + +N +++ +DD+ + G +R R G GGHNG+KS++ +
Sbjct: 63 PITFMNNSGISVKALLTYYNISVNDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAH 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +EF R++IGIGRP M +L KF++ I L++ + + L + E
Sbjct: 123 I-GTQEFDRIKIGIGRPKQGMTVINHVLGKFDSDDSITIALTLEKVSDAVAFYLQENNFE 181
Query: 199 SARHFNTIQKY 209
T+QKY
Sbjct: 182 K-----TMQKY 187
>gi|312623039|ref|YP_004024652.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203506|gb|ADQ46833.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
Length = 189
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG+KY TRHN GF ID A+ ++ + K G VLL K
Sbjct: 3 YIIAGLGNPGEKYIFTRHNA-GFLAIDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SGES +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 62 PMTYMNASGESIIEAVNFYKIKTEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQC 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF R+RIGIG P + D ++L +F +E+I A+++ +K+LL +
Sbjct: 122 L-GTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDR 178
Query: 199 SARHFN 204
+ + N
Sbjct: 179 AMNYIN 184
>gi|183984443|ref|YP_001852734.1| peptidyl-tRNA hydrolase [Mycobacterium marinum M]
gi|238689227|sp|B2HDJ5.1|PTH_MYCMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183177769|gb|ACC42879.1| peptidyl-tRNA hydrolase Pth [Mycobacterium marinum M]
Length = 191
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 110/184 (59%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG+ Y TRHN +GF + D A G VH + A G +
Sbjct: 1 MAEPLLVVGLGNPGENYARTRHN-LGFMVADLLAARLGAKFK-VHKRSGAEVVTGRLAQR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G +RL+ GG GGHNGL
Sbjct: 59 SVVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV G ++F R+RIGIGRPPG+ DP F+L+ F++ R + T ++ + +LL+
Sbjct: 119 RSVAAAL-GTKDFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLV 177
Query: 193 SKGL 196
GL
Sbjct: 178 EIGL 181
>gi|408790657|ref|ZP_11202272.1| Peptidyl-tRNA hydrolase [Lactobacillus florum 2F]
gi|408519998|gb|EKK20102.1| Peptidyl-tRNA hydrolase [Lactobacillus florum 2F]
Length = 185
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG+KY+ TRHN GF ++ FA++ I +N + A FG G + VLL +P
Sbjct: 3 MIVGLGNPGEKYQSTRHN-TGFMALEDFAKAHQIELNQHNQNAQFGSGLLEGEKVLLVEP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG++ PL YYKL L+ ++V +DDM L G +RLR++G GGHNG+KS++ +
Sbjct: 62 LTYMNESGQAVRPLLDYYKLSLDDLVVVYDDMDLHVGRIRLRNHGSSGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQ 158
G +F R++IG P Q
Sbjct: 122 -GTNQFNRIKIGTDHPQRQ 139
>gi|227520042|ref|ZP_03950091.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229550503|ref|ZP_04439228.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256618333|ref|ZP_05475179.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256762051|ref|ZP_05502631.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256956815|ref|ZP_05560986.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256964179|ref|ZP_05568350.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|257078485|ref|ZP_05572846.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|257081544|ref|ZP_05575905.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|257084192|ref|ZP_05578553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|257088019|ref|ZP_05582380.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|257088696|ref|ZP_05583057.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257417622|ref|ZP_05594616.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ARO1/DG]
gi|294779318|ref|ZP_06744721.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|300862116|ref|ZP_07108196.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|307268509|ref|ZP_07549884.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|307274220|ref|ZP_07555428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|307276445|ref|ZP_07557568.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|307286965|ref|ZP_07567040.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|312901072|ref|ZP_07760361.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|312904635|ref|ZP_07763790.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|384512164|ref|YP_005707257.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis OG1RF]
gi|397698778|ref|YP_006536566.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D32]
gi|422687623|ref|ZP_16745799.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0630]
gi|422700061|ref|ZP_16757917.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1342]
gi|422702616|ref|ZP_16760445.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1302]
gi|422708809|ref|ZP_16766330.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0027]
gi|422719760|ref|ZP_16776384.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0017]
gi|422723128|ref|ZP_16779666.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2137]
gi|422728432|ref|ZP_16784850.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0012]
gi|422733278|ref|ZP_16789599.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0645]
gi|422738808|ref|ZP_16793995.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2141]
gi|422867413|ref|ZP_16913998.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1467]
gi|424671698|ref|ZP_18108689.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis 599]
gi|424678903|ref|ZP_18115741.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV103]
gi|424679718|ref|ZP_18116532.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV116]
gi|424684125|ref|ZP_18120851.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV129]
gi|424688434|ref|ZP_18125040.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV25]
gi|424691550|ref|ZP_18128073.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV31]
gi|424695120|ref|ZP_18131504.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV37]
gi|424696490|ref|ZP_18132835.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV41]
gi|424701878|ref|ZP_18138044.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV62]
gi|424704936|ref|ZP_18141022.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV63]
gi|424706359|ref|ZP_18142366.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV65]
gi|424719050|ref|ZP_18148278.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV68]
gi|424719970|ref|ZP_18149096.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV72]
gi|424722745|ref|ZP_18151770.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV73]
gi|424733454|ref|ZP_18162014.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV81]
gi|424735226|ref|ZP_18163696.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV85]
gi|424754570|ref|ZP_18182479.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV93]
gi|424755706|ref|ZP_18183567.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R508]
gi|428765877|ref|YP_007151988.1| peptidyl-tRNA hydrolase [Enterococcus faecalis str. Symbioflor 1]
gi|430362591|ref|ZP_19427135.1| peptidyl-tRNA hydrolase [Enterococcus faecalis OG1X]
gi|430368664|ref|ZP_19428345.1| peptidyl-tRNA hydrolase [Enterococcus faecalis M7]
gi|227072590|gb|EEI10553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229304360|gb|EEN70356.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256597860|gb|EEU17036.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256683302|gb|EEU22997.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256947311|gb|EEU63943.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256954675|gb|EEU71307.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|256986515|gb|EEU73817.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|256989574|gb|EEU76876.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|256992222|gb|EEU79524.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|256996049|gb|EEU83351.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|256997508|gb|EEU84028.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257159450|gb|EEU89410.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ARO1/DG]
gi|294453604|gb|EFG22003.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|295112542|emb|CBL31179.1| peptidyl-tRNA hydrolase [Enterococcus sp. 7L76]
gi|300848641|gb|EFK76398.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|306501911|gb|EFM71200.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|306506925|gb|EFM76072.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|306509182|gb|EFM78244.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|306515170|gb|EFM83710.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|310631987|gb|EFQ15270.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|311291818|gb|EFQ70374.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|315026786|gb|EFT38718.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2137]
gi|315032976|gb|EFT44908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0017]
gi|315036611|gb|EFT48543.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0027]
gi|315145386|gb|EFT89402.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2141]
gi|315151126|gb|EFT95142.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0012]
gi|315160776|gb|EFU04793.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0645]
gi|315165852|gb|EFU09869.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1302]
gi|315171411|gb|EFU15428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1342]
gi|315579375|gb|EFU91566.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0630]
gi|327534053|gb|AEA92887.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis OG1RF]
gi|329577442|gb|EGG58891.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1467]
gi|397335417|gb|AFO43089.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D32]
gi|402350606|gb|EJU85508.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV103]
gi|402355673|gb|EJU90435.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV116]
gi|402357966|gb|EJU92654.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis 599]
gi|402360878|gb|EJU95472.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV25]
gi|402362105|gb|EJU96645.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV31]
gi|402362682|gb|EJU97200.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV129]
gi|402368967|gb|EJV03266.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV37]
gi|402370842|gb|EJV05031.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV62]
gi|402377532|gb|EJV11430.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV41]
gi|402380126|gb|EJV13895.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV68]
gi|402380546|gb|EJV14296.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV63]
gi|402388167|gb|EJV21616.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV65]
gi|402391822|gb|EJV25102.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV81]
gi|402394933|gb|EJV28080.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV72]
gi|402400927|gb|EJV33732.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV73]
gi|402403019|gb|EJV35711.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV93]
gi|402404116|gb|EJV36747.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis ERV85]
gi|402408991|gb|EJV41437.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R508]
gi|427184050|emb|CCO71274.1| peptidyl-tRNA hydrolase [Enterococcus faecalis str. Symbioflor 1]
gi|429512105|gb|ELA01724.1| peptidyl-tRNA hydrolase [Enterococcus faecalis OG1X]
gi|429516108|gb|ELA05603.1| peptidyl-tRNA hydrolase [Enterococcus faecalis M7]
Length = 188
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT-- 197
G F R++IGIGRP +L F E + A+++ + L +G T
Sbjct: 122 -GTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFV 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 ETMNQFN 186
>gi|417809763|ref|ZP_12456444.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius GJ-24]
gi|335350687|gb|EGM52183.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius GJ-24]
Length = 200
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G KY+GTRHN VGF +++ F E G + N + + F+ +++ KP
Sbjct: 18 MIVGLGNIGKKYEGTRHN-VGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKP 76
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 77 TTYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV 136
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+R+GI P +M ++L +F ++D L V L E+
Sbjct: 137 -GTEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAAL-----DDWIEN 189
Query: 200 ARHFNTIQKY 209
NT+ ++
Sbjct: 190 DDFMNTMNRF 199
>gi|268317961|ref|YP_003291680.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
gi|345304241|ref|YP_004826143.1| peptidyl-tRNA hydrolase [Rhodothermus marinus SG0.5JP17-172]
gi|262335495|gb|ACY49292.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
gi|345113474|gb|AEN74306.1| peptidyl-tRNA hydrolase [Rhodothermus marinus SG0.5JP17-172]
Length = 194
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN GF ++D AE GI+ + + G G + P L KP
Sbjct: 6 LIVGLGNPGPRYANTRHN-AGFMVVDRLAERYGIAWRSEKGPSLLGWGQLEGCPAGLMKP 64
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + + YY++PL R+LV +DD+ LP G +RLR G GGHNG++ ++
Sbjct: 65 LTYMNRSGAAVAEVVRYYRIPLERLLVVYDDIHLPPGRIRLRPGGSAGGHNGVEDIIRAL 124
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G F RLRIGIG + ++L F ID AL+ + +G+ +
Sbjct: 125 -GTTAFPRLRIGIGSNFERGRQADYVLSPFTREEWPLIDEALERACQAAVTFACEGIEAA 183
Query: 200 ARHFNTIQ 207
+N ++
Sbjct: 184 MNRYNRVE 191
>gi|343925285|ref|ZP_08764812.1| peptidyl-tRNA hydrolase [Gordonia alkanivorans NBRC 16433]
gi|343764882|dbj|GAA11738.1| peptidyl-tRNA hydrolase [Gordonia alkanivorans NBRC 16433]
Length = 189
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
+ VGLGNPG KY+ TRHN VG + D +S G VH K A + +G VL+A
Sbjct: 4 IVVGLGNPGSKYEKTRHN-VGAMVADGLVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVA 61
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+ YMN SG GPLA +Y + ++V HD++ + G++RL+ GG GGHNGL+S+
Sbjct: 62 KPRVYMNESGRQIGPLAKFYSVAPADLIVVHDELDIDFGLVRLKRGGGEGGHNGLRSISQ 121
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+ DP F+L+ F + R ++ ++ G + ++LL+S+ L
Sbjct: 122 AI-GTRDYLRVRMGIGRPPGRQDPADFVLKPFPSADRAEVELMIRNGCDAIELLVSQDL- 179
Query: 198 ESARHFNTIQKY 209
ESA+ NT+ +
Sbjct: 180 ESAQ--NTVHAW 189
>gi|310829354|ref|YP_003961711.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
gi|308741088|gb|ADO38748.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
Length = 203
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L +GLGNPG +Y TRHN +GFE +D A + + + + G F V+L K
Sbjct: 2 YLIIGLGNPGREYALTRHN-IGFEAVDYIAGQKNVQITKDEHEGLTGVYFENGEKVMLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG L +YY +PL LV +DD+ L G +R+R G G HNG++S++
Sbjct: 61 PMTYMNNSGLCVEELVSYYDVPLENTLVIYDDIDLDPGKIRIRKKGSAGTHNGMRSIIYQ 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ ++ F R+RIGIG+ P Q D ++L KF E + A+++ E ++ +++ +
Sbjct: 121 LQ-DQNFPRIRIGIGKKPPQWDLANYVLSKFTPDETEVMREAVKKTAEAVEFYINEDIDF 179
Query: 199 SARHFN 204
+ N
Sbjct: 180 AMNRLN 185
>gi|227891597|ref|ZP_04009402.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
gi|227866744|gb|EEJ74165.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
Length = 200
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G KY+GTRHN VGF +++ F E G + N + + F+ +++ KP
Sbjct: 18 MIVGLGNIGKKYEGTRHN-VGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKP 76
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 77 TTYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV 136
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+R+GI P +M ++L +F ++D L V L E+
Sbjct: 137 -GTEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAAL-----DDWIEN 189
Query: 200 ARHFNTIQKY 209
NT+ ++
Sbjct: 190 DDFMNTMNRF 199
>gi|289449607|ref|YP_003474745.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184154|gb|ADC90579.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 192
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY T HN GF ++ A+ I + T K+ G+G + P LL P
Sbjct: 6 VIVGLGNPGPKYCRTWHN-CGFMALEYLAQKYDIPIRTAKHKSLIGKGIIVGKPTLLVCP 64
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGE+ + +YKLPL+++++ +DD+ LP G RLR G G HNG++S++
Sbjct: 65 QTFMNLSGEAVRAIRDFYKLPLDKIMIVYDDLDLPVGATRLRLQGSAGTHNGMRSIVQQL 124
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ +F R+R+GIG P + ++L K + + A++ L+ LS + +
Sbjct: 125 -GSGDFPRMRLGIGPKPEYLPLVDYVLSKVGKAQEKPLFAAIEHAAAGLEAWLSGDIDSA 183
Query: 200 ARHFN 204
R N
Sbjct: 184 MRLSN 188
>gi|385840862|ref|YP_005864186.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT 5713]
gi|300214983|gb|ADJ79399.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT 5713]
Length = 185
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 8/190 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G KY+GTRHN VGF +++ F E G + N + + F+ +++ KP
Sbjct: 3 MIVGLGNIGKKYEGTRHN-VGFMVVERFVEEHGGNFNKEKFDSLIAELFINGEKIIVIKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 62 TTYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+R+GI P +M ++L +F ++D L V L + E+
Sbjct: 122 -GTEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----EN 174
Query: 200 ARHFNTIQKY 209
NT+ ++
Sbjct: 175 DDFMNTMNRF 184
>gi|311743168|ref|ZP_07716976.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
gi|311313848|gb|EFQ83757.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
Length = 188
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLA 77
WL GLGNPG Y TRHN VG+ + D AE G + +A +G + V+L
Sbjct: 3 WLIAGLGNPGPAYAATRHN-VGYLVTDVLAERVGGRWKSHRASRAEVVEGRLAGERVVLG 61
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+ ++YMN SG +A ++ + ++V HD++ + G LRL+ GG GHNGLKS+
Sbjct: 62 RSRSYMNESGGPVKAMATFFDVEPEHLVVVHDELDIDFGQLRLKLGGGDNGHNGLKSIRG 121
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G +F R+R+GIGRPPGQ ++L+ ++A R+ +D + E + ++ LL++GL
Sbjct: 122 SL-GTGDFHRVRVGIGRPPGQQTVHDYVLKPWSAAERKELDLNVVEAADAVESLLTRGLE 180
Query: 198 ESARHFN 204
+ FN
Sbjct: 181 ATQSAFN 187
>gi|167772370|ref|ZP_02444423.1| hypothetical protein ANACOL_03747 [Anaerotruncus colihominis DSM
17241]
gi|167665473|gb|EDS09603.1| aminoacyl-tRNA hydrolase [Anaerotruncus colihominis DSM 17241]
Length = 203
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 3/205 (1%)
Query: 2 LINRFLRRGFCTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK 61
+ N F + A W+ VGLGNPG Y+ TRHN GF ++ A G+ ++ + K
Sbjct: 1 MFNWFSKPAAIPAGPVEWIAVGLGNPGRDYENTRHN-AGFCAVERIAGKCGVKIDRLKFK 59
Query: 62 ATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLR 121
+ G VLL KP T+MN SGE+ +YK+P RVLV DD+ L G LR+R
Sbjct: 60 SLCADTTFGGQRVLLMKPSTFMNCSGEAVREAMQFYKIPAERVLVLFDDVSLDPGRLRIR 119
Query: 122 HNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ-MDPKAFLLQKFNAIARERIDTA 180
G GGHNG+K+ M G F R++IG+G+ P D A++L KF + +D A
Sbjct: 120 RQGSDGGHNGIKN-MIYLTGKDTFPRIKIGVGKKPHPGYDLAAWVLGKFPKELADTMDKA 178
Query: 181 LQEGVEVLKLLLSKGLTESARHFNT 205
+ E +L++ + E+ +N
Sbjct: 179 YERAAEAAQLIIEGKIDEAMNRYNA 203
>gi|301300312|ref|ZP_07206519.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|417787490|ref|ZP_12435173.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius NIAS840]
gi|418961004|ref|ZP_13512891.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius SMXD51]
gi|300852085|gb|EFK79762.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|334307667|gb|EGL98653.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius NIAS840]
gi|380344671|gb|EIA33017.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius SMXD51]
Length = 185
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 8/190 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G KY+GTRHN VGF +++ F E G + N + + F+ +++ KP
Sbjct: 3 MIVGLGNIGKKYEGTRHN-VGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 62 TTYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+R+GI P +M ++L +F ++D L V L + E+
Sbjct: 122 -GTEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----EN 174
Query: 200 ARHFNTIQKY 209
NT+ ++
Sbjct: 175 DDFMNTMNRF 184
>gi|29374897|ref|NP_814050.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227555902|ref|ZP_03985949.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257418652|ref|ZP_05595646.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|422712942|ref|ZP_16769702.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309A]
gi|422718240|ref|ZP_16774911.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309B]
gi|46576784|sp|Q839C0.1|PTH_ENTFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29342355|gb|AAO80121.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227174959|gb|EEI55931.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257160480|gb|EEU90440.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|315573563|gb|EFU85754.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309B]
gi|315582089|gb|EFU94280.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309A]
Length = 188
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEIGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT-- 197
G F R++IGIGRP +L F E + A+++ + L +G T
Sbjct: 122 -GTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFV 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 ETMNQFN 186
>gi|297568583|ref|YP_003689927.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924498|gb|ADH85308.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 197
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 106/173 (61%), Gaps = 6/173 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAK 78
L VGLGNPG +Y+ TRHN VGF D A+ GIS+ N A G+G + PV+L K
Sbjct: 3 LLVGLGNPGGEYELTRHN-VGFIFTDYLADRHGISLKNEKKWDAEVGRGTLWGQPVMLVK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG + G +A +++L V+VF D++ LP G RL G GGHNG+KS+M++
Sbjct: 62 PLTYMNRSGLAVGKIARFFQLEPTSVVVFQDELDLPLGACRLVQGRGAGGHNGIKSLMDH 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA---LQEGVEVL 188
+R+F R RIG+GRPP F+L +F+ + +D L+EGVE+L
Sbjct: 122 L-ASRDFVRFRIGVGRPPAARAAAGFVLARFSPAELQVVDKLLPFLEEGVEML 173
>gi|257064879|ref|YP_003144551.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
gi|256792532|gb|ACV23202.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
Length = 190
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG++Y TRHN GF+ + AE ++ C A + VLLAKP
Sbjct: 3 LIVGLGNPGEEYDHTRHN-AGFDTVSLLAEELRVNYWKTECGALTAKTTYRGEDVLLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
Q++MN+SG L A Y++ P ++V HD++ + G +R++ GG GHNGLKS+
Sbjct: 62 QSFMNVSGGPVKQLCAKYEVDPKTDLIVIHDELDIDPGTIRVKFGGGLAGHNGLKSIDAK 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ R++ R+RIGIGRPPG+M ++L K A + Q G E + + GL +
Sbjct: 122 LQ-TRDWLRIRIGIGRPPGRMPVTDWVLSKPKKEAWDDFVQGTQLGCEAVLYYMDNGLDK 180
Query: 199 SARHFNTIQK 208
+ + +N+ K
Sbjct: 181 AQQKYNSSAK 190
>gi|227832713|ref|YP_002834420.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|262182798|ref|ZP_06042219.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453729|gb|ACP32482.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 226
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLA 77
WL VGLGNPG KY TRHN VG+ +D G + V + + Q +G V+
Sbjct: 40 WLIVGLGNPGAKYAATRHN-VGYMAVDDLLAKSGDMLEPVTGHQLSAAQLELGGTKVVAL 98
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+ TYMNLSG+ PLAA + ++V HD++ LP G +R++ G GHNGLKS+
Sbjct: 99 RSHTYMNLSGDPIAPLAAQLGVAAENIIVIHDELDLPAGKVRIKKGGNENGHNGLKSLSE 158
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+RIGIGRPP ++L +A A +D+ + E +L++++GL
Sbjct: 159 RL-GTRDYLRVRIGIGRPPKGGSIPDWVLAPVDASA--ELDSTIATAAEAARLIVAEGLN 215
Query: 198 ESARHFNTIQK 208
++ + ++ K
Sbjct: 216 KAQQEIHSRSK 226
>gi|17228339|ref|NP_484887.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
gi|21263848|sp|Q8YYK4.1|PTH_ANASP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|17130189|dbj|BAB72801.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
Length = 203
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 9/195 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVL 75
P L VGLGNP KY TRHN +GF +DA A + IS+ + +G+G G +
Sbjct: 3 PQLIVGLGNPEPKYDQTRHN-IGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIR 61
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG++ + ++YKL VLV +DD+ LP G RLR +G GGHNG+KS
Sbjct: 62 LLKPLTYMNRSGQAIQAVTSWYKLSGESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSA 121
Query: 136 MNNFRGNREFARLRIGIGRPPGQM-----DPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+ + + F RLRIGIG+P + + + +L KF+A + + LQ VE ++L
Sbjct: 122 IAHL-STQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVEL 180
Query: 191 LLSKGLTESARHFNT 205
L +G+ ++ N+
Sbjct: 181 SLKQGVEKAMNRCNS 195
>gi|425468460|ref|ZP_18847478.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9701]
gi|389884881|emb|CCI34861.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9701]
Length = 208
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 111/193 (57%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +DA A G+S F QGF+ GD+P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDALARDWGLSWQE---NKRF-QGFIAEGDSPPW 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRAVLDWYKLEPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F + I L + ++L
Sbjct: 127 IKSMIAHV-GTESFARLRIGIGK-SSEKATISHVLGRFTPQENQVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|406830799|ref|ZP_11090393.1| peptidyl-tRNA hydrolase [Schlesneria paludicola DSM 18645]
Length = 200
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG Y+GTRHN VGF+++ A S V +A + VLLA P
Sbjct: 3 LVVGLGNPGATYEGTRHN-VGFDVLSELALRWHASRPKVRFEANLSEVNYNGEKVLLAAP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN+SG S + ++++ L V+V DD+ L G LRLR +G GG GL S++
Sbjct: 62 QTFMNISGRSVQQIVKFFQISLGDVMVVCDDLNLKVGQLRLRGSGSAGGQKGLLSIL-QV 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ RLRIGIGRPP +D F+L KF +ID A++ ++L + G++ +
Sbjct: 121 CGSDAVPRLRIGIGRPPDSVDAANFVLSKFRKDEHPKIDQAIRGAASGIELWIKDGISAA 180
Query: 200 ARHFNT 205
N
Sbjct: 181 MNVVNV 186
>gi|187736599|ref|YP_001878711.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
gi|238691875|sp|B2UPQ2.1|PTH_AKKM8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187426651|gb|ACD05930.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
Length = 190
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 103/190 (54%), Gaps = 11/190 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH---CKATFGQGFVGDAPVLL 76
+ VGLGNPG Y+ TRHN GF ++D A G C+ G G VLL
Sbjct: 7 MIVGLGNPGRTYEDTRHN-AGFMVLDRLAARWGAVFKADRQRKCEVAAGPG------VLL 59
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP T+MN SG GP+ ++KL V V HD++ P GV++LR G GGHNG+KS++
Sbjct: 60 VKPSTFMNESGLCVGPMMRFFKLDPRSVFVIHDEVDFPLGVIKLREKGSAGGHNGIKSLI 119
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+ G +EF RLR GIG+P G+ + +L KF RE +D L + + + + G+
Sbjct: 120 AHM-GTQEFPRLRFGIGQPRGKGEMIGHVLGKFRPEERELLDVTLGKAEDAVLYTMEHGI 178
Query: 197 TESARHFNTI 206
T + FN +
Sbjct: 179 TRAGNIFNAV 188
>gi|441514194|ref|ZP_20996015.1| peptidyl-tRNA hydrolase [Gordonia amicalis NBRC 100051]
gi|441450959|dbj|GAC53976.1| peptidyl-tRNA hydrolase [Gordonia amicalis NBRC 100051]
Length = 189
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG KY+ TRHN VG + DA +S G VH K A + +G VL+A
Sbjct: 4 LIVGLGNPGSKYEKTRHN-VGAMVADALVDSAGERWK-VHKKSGAEVAEVRLGGQSVLVA 61
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
K + YMN SG GPLA +Y + ++V HD++ + G +RL+ GG GGHNGL+S+ +
Sbjct: 62 KSRVYMNESGRQIGPLAKFYSVTPADLIVVHDELDIDFGAVRLKRGGGEGGHNGLRSI-S 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+ DP F+L+ F + R ++ ++ G + ++LL+S+ L
Sbjct: 121 QVMGTRDYLRVRMGIGRPPGRQDPADFVLKPFPSADRAEVELMIRNGCDAVELLVSQDL- 179
Query: 198 ESARHFNTIQKY 209
ESA+ NT+ +
Sbjct: 180 ESAQ--NTVHAW 189
>gi|407797378|ref|ZP_11144321.1| peptidyl-tRNA hydrolase [Salimicrobium sp. MJ3]
gi|407018261|gb|EKE30990.1| peptidyl-tRNA hydrolase [Salimicrobium sp. MJ3]
Length = 185
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 3/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY+ TRHN GF++ID A+ ++ + F V ++L KPQ
Sbjct: 4 IVGLGNPGKKYEATRHN-AGFQVIDELAKRNNWTVEKKKFNSLFTTEHVRGEKIILLKPQ 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSG + Y+ L +LV +DD+ L G +RLR GGHGGHNG++ +++
Sbjct: 63 TYMNLSGGAVRSFMDYFGLGEEDLLVIYDDLDLLPGKIRLRQKGGHGGHNGIRDIIDQL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +EF RLR+GIG+P +L F+ ++ ++ ++ VE + + + E
Sbjct: 122 GTKEFKRLRVGIGKPKSD-SVINHVLDTFSKEEKKYMEDSIDRSVEACEAWMERSFDEVM 180
Query: 201 RHFN 204
+N
Sbjct: 181 NEYN 184
>gi|189095922|pdb|2JRC|A Chain A, Solution Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis H37rv
Length = 204
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAP 73
+A P L VGLGNPG Y TRHN +GF + D A G A G
Sbjct: 1 MAEPLLVVGLGNPGANYARTRHN-LGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRS 59
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 194 KGL 196
+G+
Sbjct: 179 QGM 181
>gi|392988401|ref|YP_006486994.1| peptidyl-tRNA hydrolase [Enterococcus hirae ATCC 9790]
gi|392335821|gb|AFM70103.1| peptidyl-tRNA hydrolase [Enterococcus hirae ATCC 9790]
Length = 186
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY T+HN +GF ++D AE Q +A + F +LL KP
Sbjct: 3 MIVGLGNPGTKYAQTKHN-IGFMVVDRMAEKQQAVFKKNTFEAEVAEFFYQGEKILLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 62 QTFMNESGRAVGPLMTYFGIYPEELVVVYDDLDLVTGKIRLRQKGSAGGHNGIKSIISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS-KGLTE 198
N F R+++GIGRP G +L F+ + I+ ++ + V L+ +L +
Sbjct: 122 NTNV-FDRIKVGIGRPEGNKTVVQHVLSPFSKEVQPLIEASIDQSVAALEFMLDGHSFID 180
Query: 199 SARHFN 204
+ FN
Sbjct: 181 TMNKFN 186
>gi|293115400|ref|ZP_05791311.2| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
gi|292810128|gb|EFF69333.1| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
Length = 198
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 2/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNP KY+ TRHN +GF +IDA A ISM K G+G +G V+L K
Sbjct: 13 YVIAGLGNPEKKYEMTRHN-MGFRIIDALAGRFNISMTEQKHKGLIGKGIIGGNKVILVK 71
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE P+ YYK+ + +V DD+ L G +R+R G GGHNG+KS+++
Sbjct: 72 PLTYMNLSGECIRPVCDYYKVDPSECIVAFDDISLEPGKIRIRKKGSAGGHNGIKSIISC 131
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G F RL+ G+G P QMD ++L +FN+ + L++ ++ ++++G
Sbjct: 132 L-GTDAFPRLKFGVGDKPKQMDLADYVLGRFNSEDEAIVAKELEKACNAIECMVTEGYDA 190
Query: 199 SARHFNTI 206
+ +N +
Sbjct: 191 AMNKYNGV 198
>gi|293375930|ref|ZP_06622191.1| aminoacyl-tRNA hydrolase [Turicibacter sanguinis PC909]
gi|325838695|ref|ZP_08166610.1| aminoacyl-tRNA hydrolase [Turicibacter sp. HGF1]
gi|292645452|gb|EFF63501.1| aminoacyl-tRNA hydrolase [Turicibacter sanguinis PC909]
gi|325490745|gb|EGC93052.1| aminoacyl-tRNA hydrolase [Turicibacter sp. HGF1]
Length = 186
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAK 78
LFVGLGNPG KY+ TRHN GF +IDA ++ I + + K G+G V V+L K
Sbjct: 3 LFVGLGNPGSKYERTRHN-AGFMVIDALSKEWNIELTDEKKFKGQIGRGVVKGEKVILLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSGES + +Y + + ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 PTTFMNLSGESVRAVMDFYDIDIEDLVVIYDDLDLPHGKIRLRLKGSAGGHNGIKSLIAH 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLKLLLSK 194
+ +EF R+R+GI R P ++ ++L KF A+ + ID A+ L +K
Sbjct: 122 VK-TQEFKRIRVGIDRHP-KIPVVDYVLGKFTEDELALVNQAIDLAVGACTLALTDSFNK 179
Query: 195 GLTESAR 201
+TE ++
Sbjct: 180 VMTEYSK 186
>gi|46579984|ref|YP_010792.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120602604|ref|YP_967004.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|387153574|ref|YP_005702510.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris RCH1]
gi|68052972|sp|Q72BR1.1|PTH_DESVH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199329|sp|A1VDR1.1|PTH_DESVV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46449400|gb|AAS96051.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120562833|gb|ABM28577.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|311234018|gb|ADP86872.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 112/202 (55%), Gaps = 21/202 (10%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDA---------FAESQGIS-----MNTVHCKATFG 65
L +GLGNPG +Y TRHN GF IDA FA + +S + C G
Sbjct: 6 LIIGLGNPGREYDRTRHN-FGFMFIDALLEEAQRNPFARCEQLSGGKKKYDLWRCDIVEG 64
Query: 66 QGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
Q AP LLAKPQT+MNLSGE+ +A++Y++ ++V HD++ LP G +R + GG
Sbjct: 65 Q-----APWLLAKPQTFMNLSGEAVLAIASFYRVKPAAMVVAHDELDLPLGRMRFKMGGG 119
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
+ GHNGLKS+ G +F RLR+GIG+PP + ++L +F+ +D L+ +
Sbjct: 120 NAGHNGLKSITQCL-GTPDFHRLRLGIGKPPAGGETTGWVLGRFSQSDTAMVDAVLEAAI 178
Query: 186 EVLKLLLSKGLTESARHFNTIQ 207
+ ++ ++G + ++ N +
Sbjct: 179 QGIRTFATEGDVAATQYINAFR 200
>gi|227487498|ref|ZP_03917814.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541226|ref|ZP_03971275.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092480|gb|EEI27792.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182999|gb|EEI63971.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 168
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 96/187 (51%), Gaps = 32/187 (17%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +Y TRHN VGF ++DA A G+ K
Sbjct: 12 WLVVGLGNPGPEYAETRHN-VGFRVVDALAARAGVK---------------------FCK 49
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMN SGE+ PLA YK+P R++V HD++ LP G +++R G GHNGLKSV
Sbjct: 50 PQTYMNRSGEAVAPLARRYKVPPERIIVVHDELDLPEGRIKVRLGGNENGHNGLKSVSEC 109
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G R++ R+R+GIGRPP ++L IA E ++ +L +G
Sbjct: 110 L-GTRDYIRVRVGIGRPPAGTGVADWVLGTGGPIA---------GAPEAVRAILEEGFAT 159
Query: 199 SARHFNT 205
+ H N
Sbjct: 160 AQSHINA 166
>gi|331268337|ref|YP_004394829.1| aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
gi|329124887|gb|AEB74832.1| Aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
Length = 186
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
Query: 22 VGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 81
+GLGNPG +Y+ TRHN VGF+ I+ AE I N K +G G + V+L KP T
Sbjct: 1 MGLGNPGKEYEHTRHN-VGFDAIELLAEKYNIEFNRKKFKGMYGDGTIAGEKVILLKPLT 59
Query: 82 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRG 141
YMNLSGES + +YK+ ++V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 60 YMNLSGESVREVMDFYKITNEDIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHLNT 119
Query: 142 NREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 201
+ F R+++G+G P + + + +L KF +++ + +++++ KG E+
Sbjct: 120 DH-FPRVKVGVGHPV-KTNLVSHVLGKFEKEDECKLNKTFEAACNAVQIIIEKGTAEAMN 177
Query: 202 HFN 204
FN
Sbjct: 178 KFN 180
>gi|303288600|ref|XP_003063588.1| peptidyl-tRNA hydrolase [Micromonas pusilla CCMP1545]
gi|226454656|gb|EEH51961.1| peptidyl-tRNA hydrolase [Micromonas pusilla CCMP1545]
Length = 257
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 126/209 (60%), Gaps = 9/209 (4%)
Query: 2 LINRFLRRGFCTAVARP--WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TV 58
L+NR RG A P WL VGLGNPG K+ TRHN GF+ + A + G+S +
Sbjct: 24 LVNRA--RGIGGGAADPNRWLVVGLGNPGSKFTRTRHNA-GFDAVSLLASAHGMSFTGAL 80
Query: 59 HCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVL 118
++ G + + PV+LA PQT+MNLSGE+ + +YK+ R+LV +DDM P GV+
Sbjct: 81 KHRSMIATGKIANVPVVLAMPQTFMNLSGEAIRDVLRWYKISPKRMLVLYDDMDSPVGVV 140
Query: 119 RLRHNGGHGGHNGLKSVMNNF-RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERI 177
+L+ GGHGGHNG++++++ RG + FAR++IGIGRP + +L++F A RE +
Sbjct: 141 KLKGKGGHGGHNGVRNIIDEVTRGEKTFARVKIGIGRPAAGVSVIDHVLRRFTAEEREAL 200
Query: 178 D--TALQEGVEVLKLLLSKGLTESARHFN 204
+ ++E + + +L+ GL ++ N
Sbjct: 201 ERGEVMREAGDAVVAVLTDGLEKAMTRVN 229
>gi|83588952|ref|YP_428961.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
gi|119390960|sp|Q2RMC1.1|PTH_MOOTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83571866|gb|ABC18418.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
Length = 190
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN GF ++D A+ GI+++ +A GQG VG+ VLL KP
Sbjct: 6 MVVGLGNPGPRYATTRHN-AGFMVVDLLADDLGITLDRTREQALTGQGLVGNNRVLLVKP 64
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG++ PLA +Y + +LV HDD+ L G LRLR G GGH GL+S++ +
Sbjct: 65 QTYMNNSGQAVAPLARWYGIAPEAILVIHDDLDLAPGRLRLRRGGSSGGHRGLQSIITHL 124
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG-LTE 198
G RL+IGIGRPP + ++L+ F+ E I L E + LL G + E
Sbjct: 125 -GTTAVPRLKIGIGRPPLGQNVIDYVLKPFSEGDWELIRPVLLEAARAARFLLEGGSMDE 183
Query: 199 SARHFN 204
+ FN
Sbjct: 184 AMNRFN 189
>gi|261855770|ref|YP_003263053.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
gi|261836239|gb|ACX96006.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
Length = 194
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQG--ISMNT-VHCKATFGQGFVGDAPVLL 76
L VGLGNPG KY+ TRHN GF ID A G +S +T HC+ + FV L
Sbjct: 5 LIVGLGNPGSKYESTRHN-AGFWFIDELARHWGGHLSSDTKFHCEML--RIFVKQVDRRL 61
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KPQT+MNLSG+S +A +YK+P +LV HD++ L G ++L+ G HGGHNGLK +
Sbjct: 62 IKPQTFMNLSGKSVAAVANFYKIPAESILVVHDELDLLPGKMKLKIGGSHGGHNGLKDIQ 121
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G F RLRIGIG P + F+L A R ID +++ V + LL
Sbjct: 122 AQL-GTPNFWRLRIGIGHPGHRDQVVGFVLTNPPASERTLIDASIRHAVNEIDALLDIDP 180
Query: 197 TESARHFNT 205
+S + N
Sbjct: 181 EKSTQRINA 189
>gi|433630118|ref|YP_007263746.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070010]
gi|433634075|ref|YP_007267702.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070017]
gi|433641145|ref|YP_007286904.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070008]
gi|432157693|emb|CCK54971.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070008]
gi|432161711|emb|CCK59056.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070010]
gi|432165668|emb|CCK63146.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140070017]
Length = 191
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAP 73
+A P L VGLGNPG Y TRHN +GF + D A G A G
Sbjct: 1 MAEPLLVVGLGNPGANYARTRHN-LGFMVADLLAARLGAKFKAHKRSGAEVATGRSAGRS 59
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 194 KGL 196
+G+
Sbjct: 179 QGM 181
>gi|421512583|ref|ZP_15959386.1| Peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29212]
gi|401674271|gb|EJS80626.1| Peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29212]
Length = 188
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT-- 197
N F R++IGIGRP +L F E + A+++ + L +G T
Sbjct: 122 VTNV-FPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFV 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 ETMNQFN 186
>gi|218197382|gb|EEC79809.1| hypothetical protein OsI_21248 [Oryza sativa Indica Group]
gi|222632792|gb|EEE64924.1| hypothetical protein OsJ_19784 [Oryza sativa Japonica Group]
Length = 125
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 85/123 (69%), Gaps = 7/123 (5%)
Query: 79 PQTYMNLS--GES---TGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
P +NL+ GE+ GPLAAYYKLPLNRVLV D LPCG+LRL+ GG G HNG
Sbjct: 5 PTFILNLAKLGEAKTQVGPLAAYYKLPLNRVLVAFDGTDLPCGILRLQPKGGFGRHNG-- 62
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV E GIG PPGQMDPKAF+LQKFN + ERID+A++EGVE+LKL+++
Sbjct: 63 SVDFVTMCFNEVICHSKGIGCPPGQMDPKAFVLQKFNKTSLERIDSAIEEGVEILKLVVT 122
Query: 194 KGL 196
KGL
Sbjct: 123 KGL 125
>gi|166363429|ref|YP_001655702.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
gi|166085802|dbj|BAG00510.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
Length = 208
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 111/193 (57%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD+P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDSPLP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGKST-EKATISHVLGRFTPQENEVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|335047037|ref|ZP_08540058.1| aminoacyl-tRNA hydrolase [Parvimonas sp. oral taxon 110 str. F0139]
gi|333760845|gb|EGL38400.1| aminoacyl-tRNA hydrolase [Parvimonas sp. oral taxon 110 str. F0139]
Length = 195
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG Y TRHN VG+ +ID A+ I+M K+ +GQ + + K
Sbjct: 6 YLIVGLGNPGKNYVETRHN-VGYGVIDILADKYSINMKKEKFKSFYGQINMFRKKCVFLK 64
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGE+ Y+K+ ++V DD+ +P G +R++ G G HNGL+S++ +
Sbjct: 65 PLTYMNLSGEAVIDAVNYFKIKPENIIVVLDDIDIPFGTVRIKKKGSAGTHNGLRSIIYH 124
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+F R+RI +G+ P MD K F+L KF++ + + L+ + ++ ++ + +
Sbjct: 125 LE-TEDFPRVRISVGKCPDYMDLKDFVLSKFSSTEEKILKKELEIAADAVEEIIKSDVDK 183
Query: 199 SARHFN 204
+ +N
Sbjct: 184 TMCKYN 189
>gi|15608154|ref|NP_215530.1| Probable peptidyl-tRNA hydrolase Pth [Mycobacterium tuberculosis
H37Rv]
gi|15840442|ref|NP_335479.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31792205|ref|NP_854698.1| peptidyl-tRNA hydrolase [Mycobacterium bovis AF2122/97]
gi|121636943|ref|YP_977166.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660796|ref|YP_001282319.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148822223|ref|YP_001286977.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis F11]
gi|167968127|ref|ZP_02550404.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|224989415|ref|YP_002644102.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253799956|ref|YP_003032957.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN 1435]
gi|254231308|ref|ZP_04924635.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|254363930|ref|ZP_04979976.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|254549999|ref|ZP_05140446.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442435|ref|ZP_06432179.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289446595|ref|ZP_06436339.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289568992|ref|ZP_06449219.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289573654|ref|ZP_06453881.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289744750|ref|ZP_06504128.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289749544|ref|ZP_06508922.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289753075|ref|ZP_06512453.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289757096|ref|ZP_06516474.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|289761150|ref|ZP_06520528.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|294995203|ref|ZP_06800894.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 210]
gi|297633540|ref|ZP_06951320.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN 4207]
gi|297730525|ref|ZP_06959643.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN R506]
gi|298524510|ref|ZP_07011919.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|306775149|ref|ZP_07413486.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|306781936|ref|ZP_07420273.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|306783709|ref|ZP_07422031.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|306788064|ref|ZP_07426386.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|306792397|ref|ZP_07430699.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|306796800|ref|ZP_07435102.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|306802686|ref|ZP_07439354.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|306806865|ref|ZP_07443533.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|306967066|ref|ZP_07479727.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|306971256|ref|ZP_07483917.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|307083545|ref|ZP_07492658.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|313657854|ref|ZP_07814734.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN V2475]
gi|339631075|ref|YP_004722717.1| peptidyl-tRNA hydrolase [Mycobacterium africanum GM041182]
gi|340626025|ref|YP_004744477.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium canettii CIPT
140010059]
gi|375297194|ref|YP_005101461.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 4207]
gi|378770777|ref|YP_005170510.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Mexico]
gi|383306895|ref|YP_005359706.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB327]
gi|385990463|ref|YP_005908761.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5180]
gi|385994062|ref|YP_005912360.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5079]
gi|385997794|ref|YP_005916092.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CTRI-2]
gi|392385721|ref|YP_005307350.1| pth [Mycobacterium tuberculosis UT205]
gi|392433397|ref|YP_006474441.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|397672840|ref|YP_006514375.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Rv]
gi|422811973|ref|ZP_16860367.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CDC1551A]
gi|424805483|ref|ZP_18230914.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis W-148]
gi|424946763|ref|ZP_18362459.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis NCGM2209]
gi|433626110|ref|YP_007259739.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140060008]
gi|449063061|ref|YP_007430144.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Korea 1168P]
gi|54038905|sp|P65866.1|PTH_MYCBO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041591|sp|P65865.1|PTH_MYCTU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229421|sp|A1KHF2.1|PTH_MYCBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229425|sp|A5U157.1|PTH_MYCTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783880|sp|C1AM05.1|PTH_MYCBT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157836744|pdb|2Z2I|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836745|pdb|2Z2J|A Chain A, Crystal Structure Of Peptidyl-trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836746|pdb|2Z2J|B Chain B, Crystal Structure Of Peptidyl-trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836747|pdb|2Z2K|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|375332471|pdb|3TCK|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 4
gi|375332472|pdb|3TCN|A Chain A, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 2 Grown In Presence Of
Pentaglycine
gi|375332473|pdb|3TCN|B Chain B, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 2 Grown In Presence Of
Pentaglycine
gi|375332474|pdb|3TD2|A Chain A, Crystal Structures Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis - Form 5
gi|375332475|pdb|3TD6|A Chain A, Peptidyl-Trna Hydrolase From Mycobacterium Tuberculosis
From Trigonal Partially Dehydrated Crystal
gi|13880613|gb|AAK45293.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31617793|emb|CAD93902.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium bovis
AF2122/97]
gi|121492590|emb|CAL71058.1| Probable peptidyl-trna hydrolase pth [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600367|gb|EAY59377.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|134149444|gb|EBA41489.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|148504948|gb|ABQ72757.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148720750|gb|ABR05375.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis F11]
gi|224772528|dbj|BAH25334.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253321459|gb|ACT26062.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 1435]
gi|289415354|gb|EFD12594.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289419553|gb|EFD16754.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289538085|gb|EFD42663.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289542746|gb|EFD46394.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289685278|gb|EFD52766.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289690131|gb|EFD57560.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289693662|gb|EFD61091.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289708656|gb|EFD72672.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|289712660|gb|EFD76672.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|298494304|gb|EFI29598.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|308216299|gb|EFO75698.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|308325327|gb|EFP14178.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|308331492|gb|EFP20343.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|308335298|gb|EFP24149.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|308339106|gb|EFP27957.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|308342778|gb|EFP31629.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|308346687|gb|EFP35538.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|308350602|gb|EFP39453.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|308355235|gb|EFP44086.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|308359190|gb|EFP48041.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|308366756|gb|EFP55607.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|323720514|gb|EGB29596.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CDC1551A]
gi|326904759|gb|EGE51692.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis W-148]
gi|328459699|gb|AEB05122.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 4207]
gi|339294016|gb|AEJ46127.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5079]
gi|339297656|gb|AEJ49766.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CCDC5180]
gi|339330431|emb|CCC26096.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium africanum
GM041182]
gi|340004215|emb|CCC43355.1| putative peptidyl-tRNA hydrolase PTH [Mycobacterium canettii CIPT
140010059]
gi|341600959|emb|CCC63630.1| probable peptidyl-trna hydrolase pth [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|344218840|gb|AEM99470.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CTRI-2]
gi|356593098|gb|AET18327.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Mexico]
gi|358231278|dbj|GAA44770.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis NCGM2209]
gi|378544272|emb|CCE36545.1| pth [Mycobacterium tuberculosis UT205]
gi|380720848|gb|AFE15957.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB327]
gi|392054806|gb|AFM50364.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|395137745|gb|AFN48904.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Rv]
gi|432153716|emb|CCK50939.1| Putative peptidyl-tRNA hydrolase Pth [Mycobacterium canettii CIPT
140060008]
gi|440580484|emb|CCG10887.1| putative PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium tuberculosis
7199-99]
gi|444894509|emb|CCP43764.1| Probable peptidyl-tRNA hydrolase Pth [Mycobacterium tuberculosis
H37Rv]
gi|449031569|gb|AGE66996.1| Peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Korea 1168P]
Length = 191
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAP 73
+A P L VGLGNPG Y TRHN +GF + D A G A G
Sbjct: 1 MAEPLLVVGLGNPGANYARTRHN-LGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRS 59
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 194 KGL 196
+G+
Sbjct: 179 QGM 181
>gi|392391781|ref|YP_006428383.1| peptidyl-tRNA hydrolase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390522859|gb|AFL98589.1| peptidyl-tRNA hydrolase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 185
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 96/171 (56%), Gaps = 3/171 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG +Y TRHN GF ++D AE + + + +G V L KP
Sbjct: 3 LIAGLGNPGGQYAETRHN-AGFLLLDCLAEELKLDFRP-KFQGLVAETMMGGEKVYLLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S LA +YK+ ++V +DDM LP G LRLR +G GGHNG+KS +
Sbjct: 61 QTFMNLSGRSIRELAQFYKITPKDIIVVYDDMDLPLGRLRLRSSGSAGGHNGIKSTIAEL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
G F RL++GIGRPP D ++L F ++ +L +G++ + L
Sbjct: 121 -GTEGFWRLKVGIGRPPAGWDSARYVLASFTKEEIPVLEESLDKGMKAVAL 170
>gi|302388650|ref|YP_003824471.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
gi|302199278|gb|ADL06848.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
Length = 187
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN VGF ++D+ A GI ++ V K G+G +LL K
Sbjct: 2 FLIVGLGNPGREYEETRHN-VGFMVLDSLAAELGIKVDKVKFKGLLGEGVYEGKKLLLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG+S +YK+P ++V +DDM LP G LR+R +G GG G++S++ +
Sbjct: 61 PMTYMNNSGQSVVEAVKFYKIPPENLVVIYDDMDLPVGRLRVRGSGSSGGQKGMESIIYH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
F R+RIGIGRP G D +L +F+ R++ID + V ++ G+ E
Sbjct: 121 I-ATEGFPRIRIGIGRPKG--DVINHVLGRFDKEERKKIDAVIDAAVGAALTIVQHGVQE 177
Query: 199 SARHFN 204
+ +N
Sbjct: 178 AMNRYN 183
>gi|326383811|ref|ZP_08205496.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
gi|326197575|gb|EGD54764.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
Length = 188
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 118/192 (61%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG Y+ TRHN VG + D S G +VH + A +G PVL+A
Sbjct: 3 LIVGLGNPGPAYEKTRHN-VGAMVADGLVSSHGEKF-SVHKRSGALTATVRIGGEPVLVA 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
K +TYMN++G GPLA+YY + ++V HD++ + G +RL+ GG GGHNGL+S+
Sbjct: 61 KSRTYMNVTGRQIGPLASYYSVAPQDLIVLHDELDIDFGAVRLKLGGGEGGHNGLRSISQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+ DP F+L+ F A ++ + GV+ +LL+ +GL
Sbjct: 121 TI-GTRDYLRVRLGIGRPPGRQDPADFVLKPFPGSAAAEVELLVANGVDAAELLVEQGL- 178
Query: 198 ESARHFNTIQKY 209
E+A+ NT+ +
Sbjct: 179 EAAQ--NTVHAW 188
>gi|373454831|ref|ZP_09546693.1| peptidyl-tRNA hydrolase [Dialister succinatiphilus YIT 11850]
gi|371935415|gb|EHO63162.1| peptidyl-tRNA hydrolase [Dialister succinatiphilus YIT 11850]
Length = 190
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG +Y+ TRHN +GF++ID A +++ KA GQ V VLL KP
Sbjct: 3 IIAGLGNPGKEYEHTRHN-MGFDVIDELARRWHVTLWKEDMKAEIGQTLVNGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGE+ G +A YYK+ L+ + + DD+ LP G R+R G GGHNG+KS++ +
Sbjct: 62 LTYMNNSGEAVGAIARYYKVDLDDIYIICDDLDLPPGKTRIRKKGASGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ F R RIG+G P +L + ++I+ A + ++ L G+ +
Sbjct: 122 -GSENFNRFRIGVGHPQDGHTVVEHVLSRPYGEDIQKIEDAKIHTADSIESALKDGVDHA 180
Query: 200 ARHFNTIQK 208
FN +K
Sbjct: 181 MNVFNPKRK 189
>gi|303234870|ref|ZP_07321495.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
gi|302493988|gb|EFL53769.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
Length = 189
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG KY+ TRHN GF +ID A+ I +N + K+ G+GF+G+ V+L K
Sbjct: 2 YLIAGLGNPGSKYEYTRHN-AGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG++ YY L ++V DD+ +P G +R++ G G HNGLKS++
Sbjct: 61 PSTYMNDSGKAILDCFNYYNLSAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYL 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +++FAR+++ +G+ + D K F+L +F+ E ++ + + ++ + +
Sbjct: 121 IQ-SQDFARIKVSVGQND-KYDLKDFVLSQFSKKEFEVLEKEIDMSSDAAIKIVEENVDY 178
Query: 199 SARHFN 204
+ +FN
Sbjct: 179 AMNNFN 184
>gi|408418649|ref|YP_006760063.1| peptidyl-tRNA hydrolase Pth [Desulfobacula toluolica Tol2]
gi|405105862|emb|CCK79359.1| Pth: peptidyl-tRNA hydrolase [Desulfobacula toluolica Tol2]
Length = 193
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 109/192 (56%), Gaps = 2/192 (1%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
+ ++ + GLGNPG Y TRHN +GF +++A A ++++ ++ + +G + D
Sbjct: 2 SCSKFKIIAGLGNPGKGYAQTRHN-IGFLVVEALASKSHLTIDKTRFESHYVKGRIKDQD 60
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V + KP TYMNLSG S A+YYK+ + +++ HDDM L G +++ + GHGGHNG++
Sbjct: 61 VFIIKPLTYMNLSGFSIHRFASYYKVGIEDIIIVHDDMDLAFGKIKIVKSRGHGGHNGVR 120
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
S++ F G ++ R+R+G+G P D +L F+ + +D + + +L
Sbjct: 121 SILEVF-GKKDCIRIRVGVGHPGSGKDVTGHVLGGFSPDEIKILDHCIDTASDACLYVLE 179
Query: 194 KGLTESARHFNT 205
G+T + FNT
Sbjct: 180 NGVTSAMNLFNT 191
>gi|255974756|ref|ZP_05425342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256855210|ref|ZP_05560571.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|307278655|ref|ZP_07559725.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|307290198|ref|ZP_07570116.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|422686434|ref|ZP_16744631.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4000]
gi|255967628|gb|EET98250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256709723|gb|EEU24770.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|306498754|gb|EFM68253.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|306504715|gb|EFM73915.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|315028826|gb|EFT40758.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4000]
Length = 188
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRP 155
G F R++IGIGRP
Sbjct: 122 -GTNVFPRIKIGIGRP 136
>gi|375097142|ref|ZP_09743407.1| peptidyl-tRNA hydrolase [Saccharomonospora marina XMU15]
gi|374657875|gb|EHR52708.1| peptidyl-tRNA hydrolase [Saccharomonospora marina XMU15]
Length = 199
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+G RHN +G+ ++D A G A QG + +LAKP
Sbjct: 15 LLVGLGNPGPRYEGNRHN-IGYLVLDELAARVGGKFKAHKSGAEVVQGLLAGRKAVLAKP 73
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
+++MN+SG A ++K+P + ++V HD++ LP G +RL+ GG GGHNGL+S+ +
Sbjct: 74 RSFMNVSGGPVAGAARFFKVPADGIVVVHDELDLPYGSVRLKFGGGAGGHNGLRSIAKSL 133
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+R GIGRPPG+MDP F+L+ F+A R+ + + + + LL +GLT +
Sbjct: 134 -GTGDFYRVRFGIGRPPGRMDPADFVLKDFSATERKELALNIDLCADAVTELLGRGLTAA 192
Query: 200 ARHFNT 205
F+T
Sbjct: 193 QNTFHT 198
>gi|118619724|ref|YP_908056.1| peptidyl-tRNA hydrolase [Mycobacterium ulcerans Agy99]
gi|166229426|sp|A0PW66.1|PTH_MYCUA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118571834|gb|ABL06585.1| peptidyl-tRNA hydrolase Pth [Mycobacterium ulcerans Agy99]
Length = 191
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG+ Y TRHN +GF + D A G VH + A G +
Sbjct: 1 MAEPLLVVGLGNPGENYARTRHN-LGFMVADLLAARLGAKFK-VHKRSGAEVVTGRLAQR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G +RL+ GG GGHNGL
Sbjct: 59 SVVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV G + F R+RIGIGRPPG+ DP F+L+ F++ R + T ++ + +LL+
Sbjct: 119 RSVAAAL-GTKNFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLV 177
Query: 193 SKGL 196
GL
Sbjct: 178 EVGL 181
>gi|374307674|ref|YP_005054105.1| aminoacyl-tRNA hydrolase [Filifactor alocis ATCC 35896]
gi|291166312|gb|EFE28358.1| aminoacyl-tRNA hydrolase [Filifactor alocis ATCC 35896]
Length = 186
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN +GF ID + GI N + KA+ G+G +G V+L K
Sbjct: 2 YIIVGLGNPGKKYERTRHN-IGFLTIDELSRRTGIIPNKLKFKASVGEGRIGTEKVVLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGES L ++YK+ ++++V +DD+ L G LR+R G G HNG+++++
Sbjct: 61 PQTFMNLSGESVRELMSFYKVDHDKLIVIYDDIDLEVGKLRIRKKGSSGTHNGMRNII-Y 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G +F R R+GI + + ++L F + +++ + ++ L+ G+
Sbjct: 120 LLGYDDFPRFRVGISGENRRGNLADYVLGNFLKEEIPSVADSIERCADAIECLMKDGIEL 179
Query: 199 SARHFN 204
+ +N
Sbjct: 180 AMTRYN 185
>gi|56751295|ref|YP_171996.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 6301]
gi|81299038|ref|YP_399246.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 7942]
gi|68052884|sp|Q5N2J4.1|PTH_SYNP6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391026|sp|Q31RR0.1|PTH_SYNE7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56686254|dbj|BAD79476.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 6301]
gi|81167919|gb|ABB56259.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 7942]
Length = 208
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 20/189 (10%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH-CKATFGQGFV-GDAPV 74
RP L VGLGNPG KY TRHN +GF +ID A+ G+ ++ + +G+ V G +
Sbjct: 5 RPTLLVGLGNPGQKYAETRHN-IGFMLIDRLAQDWGVKLSEDRKFQGEYGETAVPGLGKI 63
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
L KP T+MN SG S + +YKL ++LV +DDM LP G LRLR +G G HNG+KS
Sbjct: 64 RLLKPTTFMNQSGRSLRAVLDWYKLTPQQILVIYDDMDLPLGRLRLRQSGSAGTHNGMKS 123
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPK----------------AFLLQKFNAIARERID 178
++++ +++F RLR+GI P Q + + LL++ +A+E +
Sbjct: 124 IISHL-SSKDFPRLRLGISLPRSQSNDRHDATVSHVLGKFAVSEQSLLKQVLDLAQEATE 182
Query: 179 TALQEGVEV 187
TAL+ GVE
Sbjct: 183 TALRSGVET 191
>gi|159027229|emb|CAO89324.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 223
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD P
Sbjct: 27 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDGPFP 81
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 82 GKIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 141
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 142 IKSMIAHV-GTENFARLRIGIGK-SSEKATISHVLGRFTPQENEVILKVLDLSRKAIELG 199
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 200 LKQGLQKAMSLYN 212
>gi|443655654|ref|ZP_21131509.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa DIANCHI905]
gi|443333572|gb|ELS48126.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa DIANCHI905]
Length = 208
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDGPFP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGK-SSEKATISHVLGRFTPQENEVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|359767553|ref|ZP_09271339.1| peptidyl-tRNA hydrolase [Gordonia polyisoprenivorans NBRC 16320]
gi|378716897|ref|YP_005281786.1| peptidyl-tRNA hydrolase Pth [Gordonia polyisoprenivorans VH2]
gi|359314948|dbj|GAB24172.1| peptidyl-tRNA hydrolase [Gordonia polyisoprenivorans NBRC 16320]
gi|375751600|gb|AFA72420.1| peptidyl-tRNA hydrolase Pth [Gordonia polyisoprenivorans VH2]
Length = 188
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG KY+ TRHN +G + D S G +VH + A + VL+A
Sbjct: 3 LIVGLGNPGPKYEKTRHN-IGAMVADHLVTSAG-GRYSVHKRSGAEVASIPLAGGSVLVA 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
K +TYMN G GPLA +Y + + ++V HD++ + G++RL+ GG GGHNGL+SV
Sbjct: 61 KARTYMNTVGRQIGPLAKFYSVTPDDLIVLHDELDIDFGLVRLKRGGGEGGHNGLRSVSQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R++ R+R+GIGRPPG+ DP F+L+ F + AR +D ++ G + ++LLL+ GL
Sbjct: 121 SV-GTRDYLRVRLGIGRPPGRQDPADFVLKPFPSAARAEVDLLIEHGADAVELLLTAGL- 178
Query: 198 ESARHFNTIQKY 209
E+A+ NT+ +
Sbjct: 179 EAAQ--NTVHAW 188
>gi|417643151|ref|ZP_12293212.1| aminoacyl-tRNA hydrolase [Staphylococcus warneri VCU121]
gi|445060521|ref|YP_007385925.1| peptidyl-tRNA hydrolase [Staphylococcus warneri SG1]
gi|330686062|gb|EGG97684.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU121]
gi|443426578|gb|AGC91481.1| peptidyl-tRNA hydrolase [Staphylococcus warneri SG1]
Length = 190
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ TRHN +GFE+ID E +++ K + + VLL +P
Sbjct: 4 IVGLGNIGKRFELTRHN-IGFEVIDYILERHNFTLDKQKFKGAYTIERMNGDKVLLIEPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ PL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++
Sbjct: 63 TMMNLSGEAVAPLMDYYNIDVDDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKML- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+RIG+GRP M ++LQ+F+ ++ ++ ++ + E++
Sbjct: 122 GTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMTTMEKVIEHSANAVEAFI-----ETS 176
Query: 201 RHFNTIQKY 209
R N + +Y
Sbjct: 177 RFDNVMNEY 185
>gi|229546914|ref|ZP_04435639.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255971756|ref|ZP_05422342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257421546|ref|ZP_05598536.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|312952656|ref|ZP_07771520.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|384517336|ref|YP_005704641.1| peptidyl-tRNA hydrolase [Enterococcus faecalis 62]
gi|422691669|ref|ZP_16749698.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0031]
gi|422695395|ref|ZP_16753381.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4244]
gi|422706365|ref|ZP_16764066.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0043]
gi|422726416|ref|ZP_16782863.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0312]
gi|229307842|gb|EEN73829.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255962774|gb|EET95250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257163370|gb|EEU93330.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|310629444|gb|EFQ12727.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|315147121|gb|EFT91137.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4244]
gi|315153560|gb|EFT97576.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0031]
gi|315156260|gb|EFU00277.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0043]
gi|315158595|gb|EFU02612.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0312]
gi|323479469|gb|ADX78908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis 62]
Length = 188
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRP 155
G F R++IGIGRP
Sbjct: 122 -GTNVFPRIKIGIGRP 136
>gi|319789279|ref|YP_004150912.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
gi|317113781|gb|ADU96271.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
Length = 188
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 101/174 (58%), Gaps = 2/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN VG+ ++D A+ G+S+N K +G+ + V+L KP
Sbjct: 4 LVVGLGNPGREYEKTRHN-VGWMVLDRLADKLGVSLNREKFKGLYGEYRGENGKVILLKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGES Y+K+ ++V +DD+ LP G LRL+ G GGH G++S++
Sbjct: 63 LTYMNRSGESVSQFLRYFKIAPEEMVVVYDDLDLPLGKLRLKPKGSSGGHRGVESIIREL 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G F RL++GIGRP + + ++L F I+ A+ + L LL+S
Sbjct: 123 -GTSNFPRLKVGIGRPARKEEVVDYVLSPFGREQWPAIEEAVDRASDCLNLLIS 175
>gi|309812802|ref|ZP_07706540.1| putative peptidyl-tRNA hydrolase [Dermacoccus sp. Ellin185]
gi|308433219|gb|EFP57113.1| putative peptidyl-tRNA hydrolase [Dermacoccus sp. Ellin185]
Length = 210
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 118/193 (61%), Gaps = 9/193 (4%)
Query: 14 AVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP 73
A +PWL VGLGNPG +Y G RHN VG +++ A G+++ +A + +G P
Sbjct: 13 ARTQPWLVVGLGNPGPRYAGNRHN-VGAMVVERMAADAGVALRAHKARAAAAEIRLGTLP 71
Query: 74 -------VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 126
V+LA P TYMN SG L ++K+P R++V HD++ + G +RL+ GG
Sbjct: 72 GGLPGPKVVLAVPSTYMNESGGPVSALMKFFKIPAERLVVIHDELDIDFGAVRLKFGGGE 131
Query: 127 GGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
GGHNGL+S+ + G +++ R+R+GIGRPPG+M+ F+L+ F+A R +D + G E
Sbjct: 132 GGHNGLRSISKSI-GTKDYLRVRLGIGRPPGRMEVSDFVLKDFSATERRELDFLIPSGAE 190
Query: 187 VLKLLLSKGLTES 199
++LL+ +GL ++
Sbjct: 191 AVELLVHRGLDDA 203
>gi|73663563|ref|YP_302344.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418577117|ref|ZP_13141244.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|119391016|sp|Q49V11.1|PTH_STAS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72496078|dbj|BAE19399.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379324397|gb|EHY91548.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 190
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ TRHN +GFE+ID E S++ K + + V+ +P
Sbjct: 4 IVGLGNIGKRFEQTRHN-IGFEVIDFMLEQNRFSLDKQKFKGAYTIERLAGEKVMFIEPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ PL YY + + ++V +DD+ LP G +RLR G GGHNG+KS++
Sbjct: 63 TMMNLSGEAVAPLMKYYDIDIEDLIVLYDDLDLPQGEIRLRQKGSAGGHNGMKSIIQML- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+RIG+ RP M ++LQKF+ E ++ ++ ++ + ES
Sbjct: 122 GTDQFKRIRIGVDRPSNGMAIVDYVLQKFSNQEMETMNKVIEHSARAIEAYI-----ESN 176
Query: 201 RHFNTIQKY 209
R + +Y
Sbjct: 177 RFDRVMNEY 185
>gi|222054665|ref|YP_002537027.1| peptidyl-tRNA hydrolase [Geobacter daltonii FRC-32]
gi|254783870|sp|B9M5U5.1|PTH_GEOSF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221563954|gb|ACM19926.1| Aminoacyl-tRNA hydrolase [Geobacter daltonii FRC-32]
Length = 191
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ TRHN GF ++D + GI+++ G+G ++L KP
Sbjct: 5 IIVGLGNPGPKYQWTRHN-AGFMVLDRLSHLAGIAISKKTFSGVCGEGNWQGERLILLKP 63
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S ++KLP+ ++V HDD+ +P G ++L+ GGH GHNGL+S+
Sbjct: 64 QTFMNLSGRSAAEAIRFHKLPIEDLIVIHDDLDIPFGRVKLKQGGGHAGHNGLRSLAQEL 123
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ +F R+R+GIGRP D ++L F+ + L V+++++L +GL ++
Sbjct: 124 -GSGDFVRVRVGIGRPV-HGDVVNYVLNNFSPEEMASLPRLLDGVVDLVEMLAREGLPKT 181
Query: 200 ARHFNT 205
+N
Sbjct: 182 MSLYNN 187
>gi|440756699|ref|ZP_20935899.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa TAIHU98]
gi|440172728|gb|ELP52212.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa TAIHU98]
Length = 208
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDGPFP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F + I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGK-SSEKATISHVLGRFTPQENQVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL +S +N
Sbjct: 185 LKQGLQKSMSLYN 197
>gi|222528652|ref|YP_002572534.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor bescii DSM 6725]
gi|254783849|sp|B9MPK0.1|PTH_ANATD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222455499|gb|ACM59761.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor bescii DSM 6725]
Length = 189
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG++Y TRHN GF ID A+ ++ + K G VLL K
Sbjct: 3 YIITGLGNPGERYTFTRHNA-GFLAIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SGES +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 62 PMTYMNASGESIIEAVNFYKIKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGIKSIIQC 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF R+RIGIG P + D ++L +F +E+I A+++ +K+LL +
Sbjct: 122 L-GTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDR 178
Query: 199 SARHFN 204
+ + N
Sbjct: 179 AMNYIN 184
>gi|254415168|ref|ZP_05028930.1| peptidyl-tRNA hydrolase [Coleofasciculus chthonoplastes PCC 7420]
gi|196177974|gb|EDX72976.1| peptidyl-tRNA hydrolase [Coleofasciculus chthonoplastes PCC 7420]
Length = 201
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 109/191 (57%), Gaps = 6/191 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT---VHCKATFGQGFVGDAPV 74
P L VGLGNP KY TRHN +GFE++D A IS + G+G GD
Sbjct: 9 PQLIVGLGNPEPKYDKTRHN-IGFEVVDELARRVQISWSENRRFQALLAEGRGLTGDKLR 67
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+L KP TYMN SG++ +YK+P VL+ +D++ LP G LR+R +G GGHNG+KS
Sbjct: 68 VL-KPLTYMNRSGQAIRAAIDWYKMPPESVLIVYDELDLPVGRLRIRLSGSAGGHNGMKS 126
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ + G + F RLRIGIG+ + + +L KF+ + I +Q V+ ++L L +
Sbjct: 127 AIAHL-GTQGFPRLRIGIGKSDPEKNTVGHVLGKFSPDESKIITEVIQLAVDAIELSLKE 185
Query: 195 GLTESARHFNT 205
G+ ++ +N+
Sbjct: 186 GVEKAMSLYNS 196
>gi|256960621|ref|ZP_05564792.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|293382708|ref|ZP_06628633.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|312908604|ref|ZP_07767546.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|312909248|ref|ZP_07768105.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
gi|256951117|gb|EEU67749.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|291079868|gb|EFE17232.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|310625391|gb|EFQ08674.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|311290490|gb|EFQ69046.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
Length = 188
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KYK T+HN +GF +D A Q +S N + +A + F+G VLL KP
Sbjct: 3 VIVGLGNPGSKYKETKHN-IGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL Y+ ++V +DD+ L G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGRSVGPLLTYFGADEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT-- 197
G F R++IGIGRP +L F E + A+++ + L +G T
Sbjct: 122 -GTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADA-ALYACEGHTFV 179
Query: 198 ESARHFN 204
E+ FN
Sbjct: 180 ETMNQFN 186
>gi|403250962|ref|ZP_10917341.1| peptidyl-tRNA hydrolase [actinobacterium SCGC AAA027-L06]
gi|402915761|gb|EJX36705.1| peptidyl-tRNA hydrolase [actinobacterium SCGC AAA027-L06]
Length = 187
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 113/191 (59%), Gaps = 4/191 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 74
+A WL +GLGNPG +Y+ TRHN +G ++D SQG +T + + +
Sbjct: 1 MADRWLVIGLGNPGPEYENTRHN-IGQLVVDEL--SQGEKFSTHKSRMQICEIKHQGQAL 57
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+LAK + YMN +G L+ +YK+ +++++V HD++ LP LR++ GG GHNGLKS
Sbjct: 58 VLAKSRGYMNETGGPAKALSDFYKIEVSKIIVVHDELDLPFNSLRIKLGGGDNGHNGLKS 117
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ +++ ++ R+R+GIGRP G+ DP F+L+ F+ R+ + G + ++ L+
Sbjct: 118 LTSSY-STSDYYRIRMGIGRPIGEQDPADFVLKPFSKEERKELQEFNSRGAQAIQSLVVN 176
Query: 195 GLTESARHFNT 205
G+ ++ FN+
Sbjct: 177 GMDKAQTAFNS 187
>gi|297745170|emb|CBI39162.3| unnamed protein product [Vitis vinifera]
Length = 92
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 63/79 (79%)
Query: 55 MNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLP 114
M+ VH KA FGQGFVGD V LA P TYMNLSGES GPLAAYYKLPLNR++VFHDD LP
Sbjct: 1 MDIVHHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLPLNRMVVFHDDKSLP 60
Query: 115 CGVLRLRHNGGHGGHNGLK 133
CGVL L H GGHG HNG +
Sbjct: 61 CGVLCLHHKGGHGSHNGYE 79
>gi|302336342|ref|YP_003801549.1| peptidyl-tRNA hydrolase [Olsenella uli DSM 7084]
gi|301320182|gb|ADK68669.1| peptidyl-tRNA hydrolase [Olsenella uli DSM 7084]
Length = 197
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 104/189 (55%), Gaps = 7/189 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM--NTVHC-KATFGQ-GFVGDA-PV 74
L GLGNPGD Y+ TRHN GF ++DA AE +S + C A++G+ G G V
Sbjct: 10 LVCGLGNPGDAYEHTRHN-AGFAVVDALAERGCVSYWKSEAGCLVASWGRRGPDGRTRTV 68
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
LLAKPQ YMN+SG L + VLV HD++ LP GV+R++ GG HNGL+S
Sbjct: 69 LLAKPQAYMNVSGGPLSKLMRQRGISAQEVLVVHDEVDLPSGVVRVKSGGGLNAHNGLRS 128
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ + G R+FAR+R GIGRPPG+M F L++ + Q + +L L +
Sbjct: 129 IADKL-GTRDFARVRCGIGRPPGRMSVADFALRQLKGSFLADFELGAQRAADACELCLDQ 187
Query: 195 GLTESARHF 203
G+ +
Sbjct: 188 GVARAVEQL 196
>gi|302380851|ref|ZP_07269314.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
gi|417925593|ref|ZP_12569012.1| aminoacyl-tRNA hydrolase [Finegoldia magna SY403409CC001050417]
gi|302311346|gb|EFK93364.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
gi|341591219|gb|EGS34427.1| aminoacyl-tRNA hydrolase [Finegoldia magna SY403409CC001050417]
Length = 189
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 104/175 (59%), Gaps = 7/175 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L GLGNPG KY+ TRHN GF +ID A+ I +N + K+ G+GF+G+ V+L K
Sbjct: 2 YLIAGLGNPGSKYEYTRHN-AGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG++ YY L ++V DD+ +P G +R++ G G HNGLKS++
Sbjct: 61 PSTYMNDSGKAILDCFNYYNLSAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIYL 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFN----AIARERIDTALQEGVEVLK 189
++FAR+++ +G+ + D K F+L +F+ + + ID + +++++
Sbjct: 121 IES-QDFARIKVSVGQND-KYDLKDFVLSQFSKNEFEVLEKEIDMSSDAAIKIVE 173
>gi|312792830|ref|YP_004025753.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312179970|gb|ADQ40140.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 189
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG++Y TRHN GF ID A+ ++ + K G VLL K
Sbjct: 3 YIIAGLGNPGERYTFTRHNA-GFLAIDYLAQFFNTKVDKIKFKGLVGSFEYSGKKVLLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG+S +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 62 PMTYMNASGDSIIEAVNFYKIKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF R+RIGIG P + D ++L +F +E+I A+++ +K+LL +
Sbjct: 122 L-GTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFKAIEKAANGIKILLESDIDR 178
Query: 199 SARHFN 204
+ + N
Sbjct: 179 AMNYIN 184
>gi|332685797|ref|YP_004455571.1| peptidyl-tRNA hydrolase [Melissococcus plutonius ATCC 35311]
gi|332369806|dbj|BAK20762.1| peptidyl-tRNA hydrolase [Melissococcus plutonius ATCC 35311]
Length = 188
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ T+HN +GF +D A + N +A F+ ++L KP
Sbjct: 3 MIVGLGNPGTKYQATKHN-IGFITLDEIATRYKVDFNKNQFEAVTTDFFIDSEKIMLIKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG S GPL YY L L+ +++ +DD+ LP G +R+R G GGHNG+KS++ +
Sbjct: 62 LTYMNESGRSIGPLVDYYGLNLSDLIIIYDDLDLPVGKVRVRAKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE-VLKLLLSKGLTE 198
G +F R+++GI RP +L F I A++ + + + S + +
Sbjct: 122 -GTNDFTRIKVGISRPENNDTVIHHVLSAFKKEQHTEIQKAIKTAADAAIYMCSSHTVID 180
Query: 199 SARHFN 204
+ FN
Sbjct: 181 AMNQFN 186
>gi|32476152|ref|NP_869146.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH 1]
gi|46576732|sp|Q7UKV0.1|PTH_RHOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|32446696|emb|CAD76532.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH 1]
Length = 190
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY TRHN +GF + DA S T + + + + VL+ P
Sbjct: 3 LVVGLGNPGRKYDQTRHN-IGFMVADALVRRYVGSPPTTKFEGEISECRIENEKVLVLCP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG+S +YKL +LV DD+ L G +RLR +G GG GL ++ +
Sbjct: 62 QTYMNASGQSVRKAMDFYKLSPEDILVICDDLNLETGRVRLRRSGSAGGQKGLVDIIRHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ ++ARL+IGIGRPP + ++L KF+ E ++ A+ + ++ G+TE+
Sbjct: 122 -GSEQWARLKIGIGRPPAKWQVSDYVLGKFDKTELEEMEHAIVHSCDATACWVADGVTEA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNRYN 185
>gi|335357789|ref|ZP_08549659.1| peptidyl-tRNA hydrolase [Lactobacillus animalis KCTC 3501]
Length = 188
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGN G +Y+ TRHN GF ++D FA++ G+S N A G VG VLLAKP
Sbjct: 3 LIVGLGNIGRQYENTRHN-TGFMIVDRFADANGLSFNREKFDAQLADGMVGGQKVLLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + + YY L L+ V++ +DDM L CG LRLR G GGHNG+KS++ +
Sbjct: 62 TTYMNESGRAVRQIVDYYDLDLDDVIIVYDDMDLDCGRLRLRQKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
G ++F RLR+GI P Q ++L +F RE D + V L+
Sbjct: 122 -GTQQFDRLRVGIDHPK-QTKVVDWVLGRFTPEQRENFDLGAADAVAALE 169
>gi|282853610|ref|ZP_06262947.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|386071074|ref|YP_005985970.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes ATCC 11828]
gi|422458336|ref|ZP_16534990.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA2]
gi|422465323|ref|ZP_16541926.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA4]
gi|282583063|gb|EFB88443.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|315092573|gb|EFT64549.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA4]
gi|315104559|gb|EFT76535.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA2]
gi|353455440|gb|AER05959.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes ATCC 11828]
Length = 200
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 108/198 (54%), Gaps = 13/198 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-----------TVHCKATFGQG 67
WL +GLGNPG +Y GTRHN VG ++I G ++ T A G
Sbjct: 5 WLVIGLGNPGPRYDGTRHN-VGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVP 63
Query: 68 FVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHG 127
V V+L + +TYMN SG + +A++ + + ++V HD++ L G LRL+ GG
Sbjct: 64 AVDAQTVILMRSRTYMNESGIAVSKVASFAGMTPDHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 128 GHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 187
GHNGLKSV + R +F R+R+G+GRPPG+ DP ++L + R +D + +
Sbjct: 124 GHNGLKSVRAHMRTG-DFIRVRVGVGRPPGRQDPADWVLARVPVRQRTDMDVQVALAADA 182
Query: 188 LKLLLSKGLTESARHFNT 205
++ ++ +GLT + FN+
Sbjct: 183 VETIIKQGLTVAQNRFNS 200
>gi|406671665|ref|ZP_11078904.1| peptidyl-tRNA hydrolase [Facklamia hominis CCUG 36813]
gi|405580915|gb|EKB54974.1| peptidyl-tRNA hydrolase [Facklamia hominis CCUG 36813]
Length = 188
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG++Y TRHN +GF +ID + M+ A + + + V L KP
Sbjct: 3 LIVGLGNPGEQYSKTRHN-IGFSVIDQLLSDNQLMMDKQKFNADYTIWRLAEDKVFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SGE+ PL +Y+ + + + V +DDM L G LRLR G GGHNG+KS M N
Sbjct: 62 YTYMNNSGEAVLPLMSYFNVSADDLCVVYDDMDLALGRLRLRTKGSAGGHNGMKS-MINL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
G EF R+RIGIG P G +L F + +D ++ + + +
Sbjct: 121 LGTSEFKRIRIGIGHPEGPYKVVDHVLSAFTPSEQLLVDQSVDKAAQAI 169
>gi|397690859|ref|YP_006528113.1| peptidyl-tRNA hydrolase [Melioribacter roseus P3M]
gi|395812351|gb|AFN75100.1| peptidyl-tRNA hydrolase [Melioribacter roseus P3M]
Length = 192
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 22 VGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQT 81
+GLGNPG Y+ TRHN +GF ++D FA+ Q ++ N + +G +G + +L KP T
Sbjct: 5 IGLGNPGKAYENTRHN-IGFIVLDRFAKLQKLNFNPEYNYLK-SEGSIGSSDFILVKPTT 62
Query: 82 YMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRG 141
+MNLSG + L + Y++P +LV DD+ L G LR+R +GG GGHNGLKS++ +
Sbjct: 63 FMNLSGLAAKNLLSNYEIPTEEMLVITDDIYLESGKLRIRRSGGDGGHNGLKSIIEHLE- 121
Query: 142 NREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESAR 201
F RLR GIG P + ++L F+ + ID ++++ V++L+ ++ G
Sbjct: 122 TTNFPRLRFGIG-DPAESTLSEYVLSPFSENELKIIDISVEKAVQLLEYFVAGGYKAMLD 180
Query: 202 HFNTIQ 207
HF+ I
Sbjct: 181 HFSKIS 186
>gi|425444180|ref|ZP_18824236.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9443]
gi|425456035|ref|ZP_18835746.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9807]
gi|389730483|emb|CCI05236.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9443]
gi|389802969|emb|CCI18052.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9807]
Length = 208
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDGPLP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRAVLDWYKLEPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGKST-EKATISHVLGRFTPQENEVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|314937291|ref|ZP_07844633.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
gi|418619051|ref|ZP_13181893.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis VCU122]
gi|313654587|gb|EFS18337.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
gi|374825757|gb|EHR89680.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis VCU122]
Length = 190
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ TRHN +GFE+ID + +++ K + + VL +P
Sbjct: 4 IVGLGNIGKRFERTRHN-IGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ GPL YY + + ++V +DDM L G +RLR G GGHNG+KS++ +
Sbjct: 63 TMMNLSGEAVGPLMDYYNVEVEDLIVLYDDMDLSQGNIRLRQKGSAGGHNGMKSIIKHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+RIG+GRP M ++LQKF+ ++ ++ + ++ + E++
Sbjct: 122 GTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFI-----ETS 176
Query: 201 RHFNTIQKY 209
R + + +Y
Sbjct: 177 RFDHVMNEY 185
>gi|85859732|ref|YP_461934.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
gi|119391023|sp|Q2LUK5.1|PTH_SYNAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85722823|gb|ABC77766.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
Length = 196
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 114/189 (60%), Gaps = 10/189 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN GF ++D AE Q I M+ A +G+G + VLLAKP
Sbjct: 3 LIVGLGNPGARYRFTRHN-FGFFVLDQLAEDQDIMMSQTGFDALWGKGVIAGQSVLLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG+S LA ++K+ + VLV HDD+ LP GV+RL+ GG GGH GL S+ ++
Sbjct: 62 QTFMNLSGKSVRKLADFFKIVVEDVLVVHDDLDLPFGVIRLKAGGGQGGHKGLISICDSL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNA----IARERIDTALQEGVEVLKLLLSKG 195
G EF R+R+GIG+P + + ++L+ F I I TA +EV +S G
Sbjct: 122 -GGPEFQRVRLGIGKPAQRSAVERYVLEPFTESELRILPRIIVTARSAILEV----ISSG 176
Query: 196 LTESARHFN 204
+ + +N
Sbjct: 177 IKTAMNSYN 185
>gi|312144319|ref|YP_003995765.1| peptidyl-tRNA hydrolase [Halanaerobium hydrogeniformans]
gi|311904970|gb|ADQ15411.1| peptidyl-tRNA hydrolase [Halanaerobium hydrogeniformans]
Length = 185
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG+KY TRHN +GF + A+ ++ ++ +G F +++ +P
Sbjct: 3 VIAGLGNPGEKYARTRHN-IGFMITAELAKKYSVN-SSYKFDGLYGDYFFAGEKIIIFQP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
YMN SG+ L YY + L +LV HDD+ L G +R + NG GGHNG+KS++N
Sbjct: 61 MKYMNRSGQPIAKLLRYYDIELEDLLVIHDDLDLDLGKIRFKRNGSSGGHNGIKSIINRL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+++F RL++G+GRPPG + ++L F ++ + V ++L+L + + +
Sbjct: 121 -DSKDFKRLKVGVGRPPGNIPVSDYVLTTFQGEEKKIASEVIDRSVSAVELMLKEDIVRA 179
Query: 200 ARHFN 204
+N
Sbjct: 180 MNMYN 184
>gi|159036392|ref|YP_001535645.1| aminoacyl-tRNA hydrolase [Salinispora arenicola CNS-205]
gi|157915227|gb|ABV96654.1| Aminoacyl-tRNA hydrolase [Salinispora arenicola CNS-205]
Length = 196
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 112/186 (60%), Gaps = 7/186 (3%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATF----GQGFVGDAP 73
PWL VGLGNPG +Y G RHN VGF + D AE G H +A G+ G
Sbjct: 7 PWLVVGLGNPGREYAGNRHN-VGFLVADLLAERLGARFGR-HKRAVAEVAEGRLGFGGPR 64
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
++L KP TYMNLSG + LA +YK+P RV+ HD++ +P G +RL+ GG GGHNG++
Sbjct: 65 LVLVKPLTYMNLSGSAVAGLAQFYKVPPARVVAVHDELDIPYGQVRLKCGGGEGGHNGVR 124
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
S+ + G +E+ R+R G+GRPP + DP F+L F + R+ +D + +V++ ++
Sbjct: 125 SMTKSL-GTKEYVRVRFGVGRPPARRDPADFVLSDFGTVERKELDFLVDRAADVVESIVL 183
Query: 194 KGLTES 199
+G+ +
Sbjct: 184 RGVEPT 189
>gi|126658601|ref|ZP_01729747.1| peptidyl-tRNA hydrolase [Cyanothece sp. CCY0110]
gi|126620038|gb|EAZ90761.1| peptidyl-tRNA hydrolase [Cyanothece sp. CCY0110]
Length = 204
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 4/189 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFV-GDAPVL 75
P L VGLGNP KY TRHN +GFEM+D AES G+S + +G + +
Sbjct: 12 PQLIVGLGNPEPKYDKTRHN-IGFEMVDLLAESWGLSWKENRRFQGMIAEGNSRNNQKIY 70
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KP TYMN SG+S + +YKL VLV +DDM L G +R+R +G GGHNG+KS+
Sbjct: 71 LLKPLTYMNRSGQSVRAVTDWYKLASTDVLVIYDDMDLSIGRIRMRLSGSAGGHNGMKSI 130
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+++ G ++F RLRIGIG+ + + +L +F R I+ V+ ++ L +G
Sbjct: 131 ISHL-GGQDFPRLRIGIGKSNQLDNTVSHVLGRFAPEERTIINKTFPLVVDAIETSLKEG 189
Query: 196 LTESARHFN 204
+ ++ FN
Sbjct: 190 IEKAMSLFN 198
>gi|443492562|ref|YP_007370709.1| peptidyl-tRNA hydrolase Pth [Mycobacterium liflandii 128FXT]
gi|442585059|gb|AGC64202.1| peptidyl-tRNA hydrolase Pth [Mycobacterium liflandii 128FXT]
Length = 191
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 109/184 (59%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG+ Y TRHN +GF + D A G VH + A G +
Sbjct: 1 MAEPLLVVGLGNPGENYARTRHN-LGFMVADLLAARLGAKFK-VHKRSGAEVVTGRLAQR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+ YMN SG PLA +Y +P ++V HD++ L G +RL+ GG GGHNGL
Sbjct: 59 SVVLAKPRCYMNESGRQVAPLAKFYSVPPADLIVIHDELDLDFGRIRLKFGGGEGGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV G ++F R+RIG GRPPG+ DP F+L+ F++ R + T ++ + +LL+
Sbjct: 119 RSVAAAL-GTKDFQRVRIGTGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLV 177
Query: 193 SKGL 196
GL
Sbjct: 178 EMGL 181
>gi|169347360|ref|ZP_02866298.1| hypothetical protein CLOSPI_00075 [Clostridium spiroforme DSM 1552]
gi|169293977|gb|EDS76110.1| aminoacyl-tRNA hydrolase [Clostridium spiroforme DSM 1552]
Length = 184
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y GTRHN GF +ID A + ++ K + + ++L KP
Sbjct: 3 LIVGLGNPGKEYAGTRHN-CGFMVIDHLASKLNVDVDQNKFKGLYAKVKYHGEDIILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGES + ++K+ +LV +DD+ +P G LRLR G GGHNG+K+++ +
Sbjct: 62 QTYMNLSGESVNAVMNFFKIDKEDLLVIYDDLDMPVGKLRLRKTGSAGGHNGIKNIIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
++F R+R+GI R M+ ++L +F+ + E I+ ++ + L +
Sbjct: 122 NS-QDFKRIRVGIDRHK-YMNVADYVLSRFSKVESEAIEQGIENAANAVLDYLDNDFNHA 179
Query: 200 ARHFN 204
++N
Sbjct: 180 MNYYN 184
>gi|187251695|ref|YP_001876177.1| aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
gi|226723254|sp|B2KE94.1|PTH_ELUMP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186971855|gb|ACC98840.1| Aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
Length = 187
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN GF ++D A G++ N + + +G V LAKP
Sbjct: 4 LIVGLGNPGPQYAVTRHN-AGFMIVDNLAVKLGVNFNAYKNLGEYVKTTIGGQDVFLAKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSG LA +YK+ +LV DD+ + G +R+R +G GG NG+K+++ F
Sbjct: 63 LTFMNLSGRMVTHLAGFYKIKPQEILVCFDDISINLGAVRIRKDGSAGGQNGMKNIIELF 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G ++ RLR G+G P + D ++L KF+ + ++ +++ VE + + GL +
Sbjct: 123 -GTQDIPRLRFGVGPKPERFDSADYVLSKFSKSDEKLLNESIEAAVEAAESCVKDGLERA 181
Query: 200 ARHFN 204
FN
Sbjct: 182 MNKFN 186
>gi|299820652|ref|ZP_07052541.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
gi|299817673|gb|EFI84908.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
Length = 184
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 3/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ TRHN VGF ++D + + V G +G VLL KP
Sbjct: 3 MIVGLGNPGMKYERTRHN-VGFMVVDELSYRYQLPWKKVKQNGMVATGMIGSEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG GPL YY + + ++V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTFMNESGLCVGPLMDYYDIAVEDLIVIYDDLDLPVGKIRLRTKGSAGGHNGMKSIIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ +EF R+R+G+ RP + +L +F+ + I A+Q + ++ E
Sbjct: 122 K-TQEFNRIRVGVDRPRNG-EVIHHVLGEFSKAEQPTIIEAIQTSADAVEAFAEHSFVEV 179
Query: 200 ARHFN 204
FN
Sbjct: 180 MNKFN 184
>gi|403732120|ref|ZP_10949630.1| peptidyl-tRNA hydrolase [Gordonia rhizosphera NBRC 16068]
gi|403201948|dbj|GAB93961.1| peptidyl-tRNA hydrolase [Gordonia rhizosphera NBRC 16068]
Length = 188
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 116/192 (60%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG KY+ TRHN +G + D +S G VH + A + VL+A
Sbjct: 3 LIVGLGNPGPKYEKTRHN-IGAMVADGLVDSAGERWK-VHKRSGAEVAPLTLAGQQVLVA 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+TYMN SG GPLA +Y + + ++V HD++ + G++RL+ GG GGHNGL+S+
Sbjct: 61 KPRTYMNESGRQIGPLAKFYSVKPDDLIVLHDELDIDFGLVRLKRGGGEGGHNGLRSISQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R++ R+R+GIGRPPG+ DP F+L+ F AR +D + G + +LL++ GL
Sbjct: 121 SL-GTRDYLRVRLGIGRPPGRQDPADFVLKPFPTSARADVDLLITHGCDAAELLVAHGLE 179
Query: 198 ESARHFNTIQKY 209
+ NT+ +
Sbjct: 180 PAQ---NTVHAW 188
>gi|228476232|ref|ZP_04060935.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
gi|228269717|gb|EEK11216.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
Length = 190
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ TRHN +GFE+ID + +++ K + + VL +P
Sbjct: 4 IVGLGNIGKRFERTRHN-IGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIEPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ GPL YY + + ++V +DDM L G +RLR G GGHNG+KS++ +
Sbjct: 63 TMMNLSGEAVGPLMDYYNVEVEDLIVLYDDMDLSQGHIRLRQKGSAGGHNGMKSIIKHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+RIG+GRP M ++LQKF+ ++ ++ + ++ + E++
Sbjct: 122 GTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFI-----ETS 176
Query: 201 RHFNTIQKY 209
R + + +Y
Sbjct: 177 RFDHVMNEY 185
>gi|227504124|ref|ZP_03934173.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199281|gb|EEI79329.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 182
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 101/154 (65%), Gaps = 5/154 (3%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKAT--FGQGFVGDAPVLL 76
+L VGLGNPG KY GTRHN +GF+++D Q + +VH K+ + +G A ++L
Sbjct: 4 FLIVGLGNPGPKYAGTRHN-IGFDVVDEIV-GQNYTNFSVHKKSNTELAETRLGSAKLVL 61
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKP+++MNLSG L Y+ + +++V HD++ L GV++ R GG GHNGL+S
Sbjct: 62 AKPRSFMNLSGGPIKALLQYFSINPAQLIVVHDELELDFGVVKHRFGGGDHGHNGLRSTT 121
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN 170
+ G +++ RL +GIGRPPG+MDP +F+L+ ++
Sbjct: 122 KSL-GTKDYQRLSVGIGRPPGRMDPASFVLKPWS 154
>gi|254475939|ref|ZP_05089325.1| peptidyl-tRNA hydrolase [Ruegeria sp. R11]
gi|214030182|gb|EEB71017.1| peptidyl-tRNA hydrolase [Ruegeria sp. R11]
Length = 236
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG KY G RHN +GF +D A+ G S +A +G +G VLL KP
Sbjct: 3 LFVGLGNPGAKYAGNRHN-IGFMALDQIADDHGFSPWKSKFQAQLSEGVLGGEKVLLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG+S G +YKL V+V HD++ L G R++ GGH GHNGL+S+ ++
Sbjct: 62 QTFMNLSGQSVGEAMRFYKLTPADVIVLHDELDLAPGKARVKQGGGHAGHNGLRSIHSHI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
++ R+R+GIG P + ++L+ F +D L+ G+ L+KG
Sbjct: 122 --GADYGRVRLGIGHPGHKDAVAGYVLRDFAKADEVWLDDLLR-GISDGAASLAKG 174
>gi|383788979|ref|YP_005473548.1| peptidyl-tRNA hydrolase [Caldisericum exile AZM16c01]
gi|381364616|dbj|BAL81445.1| peptidyl-tRNA hydrolase [Caldisericum exile AZM16c01]
Length = 189
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 108/189 (57%), Gaps = 7/189 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPVL 75
L +GLGN G +Y+ TRHN VGF +ID +++ I +N A +G+G V + ++
Sbjct: 3 LIIGLGNIGKEYENTRHN-VGFMVIDELSKAWKIKVNFAKFNALYGKGTVNISGNEYNII 61
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
LAKP TYMNLSG + L + +P ++V HDD+ LP G LR++ G GH G++S+
Sbjct: 62 LAKPLTYMNLSGRAVKQLMDGFLVPSTHIIVIHDDLDLPLGTLRIKVGGSDAGHKGVRSI 121
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
R+RIGIGRP + + ++L++F + I ++ V+ ++ ++SKG
Sbjct: 122 KELVED--PIIRVRIGIGRPINKEEVVNYVLEEFGKDEKFAILDVIKRSVKAIETIISKG 179
Query: 196 LTESARHFN 204
+ + R FN
Sbjct: 180 VEVAQREFN 188
>gi|431792122|ref|YP_007219027.1| peptidyl-tRNA hydrolase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782348|gb|AGA67631.1| peptidyl-tRNA hydrolase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 14/177 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN GF ++D AE + + + + +G + L KP
Sbjct: 3 LIVGLGNPGVQYAETRHN-AGFLLLDCLAEELNLDFRS-KFQGLVSETQIGGEKIYLLKP 60
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSG S + +YK+ +LV +DDM L G LRLR +G GGHNG+KS +
Sbjct: 61 QTFMNLSGRSIREVVQFYKIAPQDILVIYDDMDLAVGRLRLRSSGSAGGHNGIKSTIAEL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G+ +F RL++GIGRPP D ++L F +E + VL+ +L KG+
Sbjct: 121 -GSEDFWRLKVGIGRPPTGWDSARYVLASFA-----------KEEIPVLEEVLDKGM 165
>gi|421451406|ref|ZP_15900767.1| Peptidyl-tRNA hydrolase [Streptococcus salivarius K12]
gi|421453442|ref|ZP_15902798.1| Peptidyl-tRNA hydrolase [Streptococcus salivarius K12]
gi|400181751|gb|EJO16018.1| Peptidyl-tRNA hydrolase [Streptococcus salivarius K12]
gi|400181837|gb|EJO16099.1| Peptidyl-tRNA hydrolase [Streptococcus salivarius K12]
Length = 209
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 24 LVVGLGNPGSKYHETRHN-VGFMAIDLMAKELGLTFSEERTFKAEVASTFLNGEKVYFVK 82
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 83 PTTFMNLSGLAVRALLAYYNIPMEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 142
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------IARERIDTAL 181
G +EF R++IGIGRP M +L KF+ + ++++TAL
Sbjct: 143 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETAL 191
>gi|312864107|ref|ZP_07724342.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis F0396]
gi|311100339|gb|EFQ58547.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis F0396]
Length = 189
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLIAKKLGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPMEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------IARERIDTAL 181
G +EF R++IGIGRP M +L KF+ + ++++TAL
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETAL 171
>gi|383786542|ref|YP_005471111.1| peptidyl-tRNA hydrolase [Fervidobacterium pennivorans DSM 9078]
gi|383109389|gb|AFG34992.1| peptidyl-tRNA hydrolase [Fervidobacterium pennivorans DSM 9078]
Length = 177
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 112/188 (59%), Gaps = 14/188 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG+KY TRHN VGF ++D ++S N ++ + V L KP
Sbjct: 2 IIIGLGNPGEKYANTRHN-VGFMVLDRLSKSWKSGPNYLYSDIN-----ISGQKVKLVKP 55
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE + LP + ++V +DD+ LP G +R+R +G GGHNG+KS+++
Sbjct: 56 LTYMNLSGE------VFKYLPHDDIIVVYDDLDLPLGRIRIRKDGSAGGHNGIKSIISYI 109
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
++F R+RIGIG P ++D ++L +F+ E++ + ++ ++ ++S+G+ ++
Sbjct: 110 --GQDFPRIRIGIGPKPKEIDAANYVLSEFSPEEFEKLRKVIDLTLQAIETIVSEGIDKA 167
Query: 200 ARHFNTIQ 207
+N+IQ
Sbjct: 168 MNKYNSIQ 175
>gi|339449334|ref|ZP_08652890.1| peptidyl-tRNA hydrolase [Lactobacillus fructivorans KCTC 3543]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G ++ GTRHN GF ++D FA+ GI +N A +G G V V++ KP
Sbjct: 3 MIVGLGNVGSEFDGTRHN-TGFMVVDQFADQNGIEINKQKLDAMYGTGIVNGEKVMVVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T MN SG + PL +YKL L+ +++ +DDM LP G +RLR++G GGHNG+KS++ +
Sbjct: 62 TTMMNDSGRAVHPLMQFYKLDLDDLVIVYDDMDLPVGRIRLRNHGSAGGHNGIKSMIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F R+++G P + ++L KF+ R A V+ L +S
Sbjct: 122 -GTDQFNRIKVGTSHPKRE-SVVNYVLGKFSLEQRAPFGEAKDHAVKALNEWVS 173
>gi|313889528|ref|ZP_07823174.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus SPIN 20026]
gi|313122140|gb|EFR45233.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus SPIN 20026]
Length = 189
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAK 78
+ VGLGNPG KY T+HN VGF +D A++ +S + KA G F+ V K
Sbjct: 4 MIVGLGNPGSKYDNTKHN-VGFMAVDQLAKNFDVSFTEDKNFKALIGWAFINQEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SG + L YY + ++ ++V +DD+ + G LR R G GGHNG+KS++ N
Sbjct: 63 PTTFMNNSGIAVRALLTYYNIAISDLIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAN 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G++EF R++IGIGRP M +L KF RI L++ V + L +G E
Sbjct: 123 I-GSQEFDRVKIGIGRPHSGMTVINHVLGKFEKEDGIRIALTLEKVVMAVNFYLQEGNFE 181
Query: 199 -SARHFN 204
+ + FN
Sbjct: 182 LTMQKFN 188
>gi|425464172|ref|ZP_18843494.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9809]
gi|389833870|emb|CCI21240.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9809]
Length = 208
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 111/193 (57%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD+P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWQE---NKRF-QGFIAEGDSPLP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F + I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGKST-EKATISHVLGRFTPQENQVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|387783154|ref|YP_006069237.1| peptidyl-tRNA hydrolase (PTH) [Streptococcus salivarius JIM8777]
gi|338744036|emb|CCB94402.1| peptidyl-tRNA hydrolase (PTH) [Streptococcus salivarius JIM8777]
Length = 189
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPIEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------IARERIDTAL 181
G +EF R++IGIGRP M +L KF+ + ++++TAL
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETAL 171
>gi|55820108|ref|YP_138550.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMG 18311]
gi|55821998|ref|YP_140439.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus CNRZ1066]
gi|116626978|ref|YP_819597.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMD-9]
gi|386085710|ref|YP_006001584.1| Peptidyl-tRNA hydrolase [Streptococcus thermophilus ND03]
gi|386343613|ref|YP_006039777.1| peptidyl-tRNA hydrolase (PTH) [Streptococcus thermophilus JIM 8232]
gi|387908813|ref|YP_006339119.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus MN-ZLW-002]
gi|418028500|ref|ZP_12667063.1| Aminoacyl-tRNA hydrolase [Streptococcus thermophilus CNCM I-1630]
gi|68052882|sp|Q5M222.1|PTH_STRT1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052883|sp|Q5M6L4.1|PTH_STRT2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122268417|sp|Q03N21.1|PTH_STRTD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|55736093|gb|AAV59735.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMG 18311]
gi|55737983|gb|AAV61624.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus CNRZ1066]
gi|116100255|gb|ABJ65401.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMD-9]
gi|312277423|gb|ADQ62080.1| Peptidyl-tRNA hydrolase [Streptococcus thermophilus ND03]
gi|339277074|emb|CCC18822.1| peptidyl-tRNA hydrolase (PTH) [Streptococcus thermophilus JIM 8232]
gi|354687060|gb|EHE87169.1| Aminoacyl-tRNA hydrolase [Streptococcus thermophilus CNCM I-1630]
gi|387573748|gb|AFJ82454.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus MN-ZLW-002]
Length = 189
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPMEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------IARERIDTALQ 182
G +EF R++IGIGRP M +L KF+ + ++++TAL
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYAMILLTLDKVETALH 172
>gi|238855037|ref|ZP_04645365.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|260664821|ref|ZP_05865672.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
gi|313472623|ref|ZP_07813112.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|238832281|gb|EEQ24590.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|239529424|gb|EEQ68425.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|260561304|gb|EEX27277.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
Length = 185
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG KY T+HN GF +D + G+S+N + F + + V+L +P
Sbjct: 3 IIAGLGNPGKKYDRTKHN-TGFMCLDNYMAKNGLSLNQNKFEGLFTKEKIAGEDVILLEP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG S +A ++K+ + +L+ DDM +P G +R+R NG GGHNG+KS++ +
Sbjct: 62 QTYMNESGRSISQVANFFKIDPSDILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G +F RL+IGI R P +++L FN ++ +DTA ++L +S
Sbjct: 122 -GTEKFNRLKIGI-RHPENTTVVSWVLTPFNNEQQKLMDTAFSTSEDILADFIS 173
>gi|308274566|emb|CBX31165.1| Peptidyl-tRNA hydrolase [uncultured Desulfobacterium sp.]
Length = 201
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
R L GLGNPG Y TRHN GF +ID A++ I + + +G+G + V+L
Sbjct: 7 RVRLIAGLGNPGSAYAKTRHN-AGFMVIDELADAFSIPVEKNKYETIYGRGLIKGIDVIL 65
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKP +MN SG L+ YYK+ +L+ HDD+ L G +++ GG GGH G+KS++
Sbjct: 66 AKPVAFMNRSGPPIYSLSNYYKILQKDILIIHDDVDLAFGRIKINPKGGSGGHKGIKSLI 125
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+ F GN +R+RIGIGR + ++L KFN ++ + + ++ G+
Sbjct: 126 DTF-GNNNISRIRIGIGRSESGISVADYVLGKFNIKENNELNLINKAARDAAVTIIYSGI 184
Query: 197 TESARHFN 204
TE+ FN
Sbjct: 185 TEAMNIFN 192
>gi|340397872|ref|YP_004726897.1| peptidyl-tRNA hydrolase (PTH) [Streptococcus salivarius CCHSS3]
gi|387762253|ref|YP_006069230.1| peptidyl-tRNA hydrolase [Streptococcus salivarius 57.I]
gi|338741865|emb|CCB92370.1| peptidyl-tRNA hydrolase (PTH) [Streptococcus salivarius CCHSS3]
gi|339293020|gb|AEJ54367.1| peptidyl-tRNA hydrolase [Streptococcus salivarius 57.I]
Length = 189
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPMEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------IARERIDTAL 181
G +EF R++IGIGRP M +L KF+ + ++++TAL
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETAL 171
>gi|445370138|ref|ZP_21425835.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus MTCC 5460]
gi|445384994|ref|ZP_21427541.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus MTCC 5461]
gi|444751738|gb|ELW76445.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus MTCC 5461]
gi|444751759|gb|ELW76465.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus MTCC 5460]
Length = 189
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPMKDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------IARERIDTALQ 182
G +EF R++IGIGRP M +L KF+ + ++++TAL
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYAMILLTLDKVETALH 172
>gi|315650058|ref|ZP_07903137.1| aminoacyl-tRNA hydrolase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315487687|gb|EFU77991.1| aminoacyl-tRNA hydrolase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 211
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ +
Sbjct: 20 SKMKLIVGLGNPGREYVNTRHN-AGFYVVEKLAYELGEDISERKYKGVFTRVRIGNEKAI 78
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ +P TYMN SGES Y+K+ + V+V +DD+ L G LR+R G GGHNG+KS+
Sbjct: 79 ILEPLTYMNNSGESVRAFMDYFKIDASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSL 138
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G +F R+++G+G P +MD +L FN ++ +D A + +E ++LL++
Sbjct: 139 IAHM-GTSDFPRIKVGVGEKPTKMDLADHVLGHFNDEDKKLLDEAASDAIEAIRLLVAGE 197
Query: 196 LTESARHFNT 205
+ +N
Sbjct: 198 YDMAMNRYNV 207
>gi|379726859|ref|YP_005319044.1| peptidyl-tRNA hydrolase [Melissococcus plutonius DAT561]
gi|376317762|dbj|BAL61549.1| peptidyl-tRNA hydrolase [Melissococcus plutonius DAT561]
Length = 188
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ T+HN +GF +D A + N +A F+ ++L KP
Sbjct: 3 MIVGLGNPGTKYQATKHN-IGFITLDEIATRYKVDFNKNQFEAVTTDFFIDSEKIMLIKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG S GPL YY L L+ +++ +DD+ LP G +R+R G GGHNG+KS++ +
Sbjct: 62 LTYMNESGRSIGPLVDYYGLNLSDLIIIYDDLDLPVGKVRVRAKGSAGGHNGIKSLIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE-VLKLLLSKGLTE 198
G +F R+++GI RP +L F I A++ + + + S + +
Sbjct: 122 -GTNDFTRIKVGISRPENNDTVIHHVLSAFKKEQHIEIQKAIKTAADAAIYMCSSHTVID 180
Query: 199 SARHFN 204
+ FN
Sbjct: 181 AMNQFN 186
>gi|416851418|ref|ZP_11908563.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus LQ 940-04]
gi|356738907|gb|EHI64139.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus LQ 940-04]
Length = 186
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAPVLLAK 78
+ VGLGNPG KY T+HN VGF +D A++ +S + KA G F+ V K
Sbjct: 1 MIVGLGNPGSKYDNTKHN-VGFMAVDQLAKNFDVSFTEDKNFKALIGWAFINQEKVYFVK 59
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MN SG + L YY + ++ ++V +DD+ + G LR R G GGHNG+KS++ N
Sbjct: 60 PTTFMNNSGIAVRALLTYYNIAISDLIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAN 119
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G++EF R++IGIGRP M +L KF RI L++ V + L +G E
Sbjct: 120 I-GSQEFDRVKIGIGRPHSGMTVINHVLGKFEKEDGIRIALTLEKVVMAVNFYLQEGNFE 178
Query: 199 -SARHFN 204
+ + FN
Sbjct: 179 LTMQKFN 185
>gi|297626905|ref|YP_003688668.1| peptidyl-tRNA hydrolase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922670|emb|CBL57247.1| Peptidyl-tRNA hydrolase (aminoacyl-tRNA hydrolase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 197
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 13/197 (6%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDA--------FAESQGISMNTVHCKATFGQGFVG 70
WL VGLGNPG +Y TRHN +GF +D F+ S+G+ T + QG G
Sbjct: 4 WLVVGLGNPGPQYANTRHN-IGFLTVDELARRAGERFSASRGMHAETASTRIGP-QGIGG 61
Query: 71 DAP--VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 128
AP ++LAKP+T+MN SG + L+ + + + ++V HD++ L G LR++ GG G
Sbjct: 62 PAPEKLVLAKPRTFMNESGRAVRKLSDFLDIEPDHIIVVHDELDLDPGRLRIKLGGGDNG 121
Query: 129 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
HNGLKS+ + G +F R+R+GIGRP G ++L +F+ RE + + +G E +
Sbjct: 122 HNGLKSIRAHL-GTGDFYRVRLGIGRPQGHRAGADYVLGRFSKAEREELAIEVDDGAEAV 180
Query: 189 KLLLSKGLTESARHFNT 205
L++ GL + FN
Sbjct: 181 ISLINAGLGPTQNRFNN 197
>gi|228476795|ref|ZP_04061443.1| peptidyl-tRNA hydrolase [Streptococcus salivarius SK126]
gi|228251532|gb|EEK10669.1| peptidyl-tRNA hydrolase [Streptococcus salivarius SK126]
Length = 189
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPVEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNA-------IARERIDTAL 181
G +EF R++IGIGRP M +L KF+ + ++++TAL
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETAL 171
>gi|313891661|ref|ZP_07825268.1| aminoacyl-tRNA hydrolase [Dialister microaerophilus UPII 345-E]
gi|313119939|gb|EFR43124.1| aminoacyl-tRNA hydrolase [Dialister microaerophilus UPII 345-E]
Length = 190
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF++++ F+ +S+ + ++ AKP
Sbjct: 3 LIVGLGNPGKEYEKTRHN-IGFDVLELFSHRNKLSLWKNFMNSEISTVMNNGEKIIFAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGES G +A YYK+ + V DD+ LP G +R+R G GGHNGLKS+M +
Sbjct: 62 QTYMNNSGESIGDIAKYYKIEPEDIWVICDDLDLPVGKVRIRKKGSAGGHNGLKSIMAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ + F R R+GIG P +L + ++I+ A ++ E ++ L + + ++
Sbjct: 122 Q-SENFCRFRVGIGHPKNGHTVIEHVLGRPYGEDIKKIEEAEEKVAESIEFALKENIDKA 180
Query: 200 ARHFN 204
+FN
Sbjct: 181 MNYFN 185
>gi|282891671|ref|ZP_06300158.1| hypothetical protein pah_c188o046 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175584|ref|YP_004652394.1| peptidyl-tRNA hydrolase [Parachlamydia acanthamoebae UV-7]
gi|281498461|gb|EFB40793.1| hypothetical protein pah_c188o046 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479942|emb|CCB86540.1| peptidyl-tRNA hydrolase [Parachlamydia acanthamoebae UV-7]
Length = 198
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 113/198 (57%), Gaps = 9/198 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFVGDAP 73
V++ LFVGLGNPG KY+ TRHN +GF ++ A+A+ G ++ K T +
Sbjct: 4 VSKQHLFVGLGNPGKKYEMTRHN-IGFLVLQAYAQQFGFTLAPDSKFKGTVAKKKFHSGE 62
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
V L P T+MN SG++ +YK+P++ + V DD L G +RLR G GGHNGLK
Sbjct: 63 VHLLLPATFMNESGQAVKRYVDFYKIPISSMTVVVDDADLSFGAIRLRSQGSAGGHNGLK 122
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQM---DPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
S++++ G +FARLR+GIGRP + D ++L F+ + + LQ+G +L+
Sbjct: 123 SIISHL-GTTQFARLRMGIGRPDRESSLDDLADYVLDNFSQNEMPHLASFLQQGANILER 181
Query: 191 LLSKGLTESARHFNTIQK 208
LL++ L A N + K
Sbjct: 182 LLTQDL---AAAMNVVNK 196
>gi|397736067|ref|ZP_10502751.1| peptidyl-tRNA hydrolase [Rhodococcus sp. JVH1]
gi|396927910|gb|EJI95135.1| peptidyl-tRNA hydrolase [Rhodococcus sp. JVH1]
Length = 190
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 115/179 (64%), Gaps = 5/179 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG +Y+ TRHN VGF + + G +VH K A QG + P +LA
Sbjct: 7 LVVGLGNPGPQYEKTRHN-VGFMVAGVLSARMGGKF-SVHKKSGAEIVQGRLEGRPTILA 64
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+++MNLSG + LA ++ + ++V HD++ L G +RL+ GG GGHNGL+S+ +
Sbjct: 65 KPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISS 124
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G +++ R R+GIGRPPG+MDP +++L+ F+++ R+ +D +E + ++L+L GL
Sbjct: 125 AL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRVGL 182
>gi|344996980|ref|YP_004799323.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor lactoaceticus 6A]
gi|343965199|gb|AEM74346.1| Peptidyl-tRNA hydrolase [Caldicellulosiruptor lactoaceticus 6A]
Length = 189
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG++Y TRHN GF ID A+ ++ + K G VLL K
Sbjct: 3 YIIAGLGNPGERYTFTRHN-AGFLAIDYLAQFFNTKVDKIKFKGLVGSFEYSGKKVLLLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG+S +YK+ +++V +DD+ GV+++R G GGHNG+KS++
Sbjct: 62 PMTYMNASGDSIIEAVNFYKIKPEKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G EF R+RIGIG P + D ++L +F +E+I A+++ +K+LL +
Sbjct: 122 L-GTEEFPRIRIGIGIP--KHDMVKYVLSEFEDGEKEKIFKAIEKAANGIKILLESDIDR 178
Query: 199 SARHFN 204
+ + N
Sbjct: 179 AMNYIN 184
>gi|331701923|ref|YP_004398882.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
gi|329129266|gb|AEB73819.1| Peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
Length = 186
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y GTRHN GF +++ FA+S IS+ T A +G GFV + V++ +P
Sbjct: 3 MIVGLGNIGPQYDGTRHN-TGFMVVEQFAKSHDISIKTRKMNAKYGSGFVNNTKVMVVEP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + PL Y+ + + +++ HDDM LP G +R++ G GGHNG+KS++ +
Sbjct: 62 TTFMNDSGLAVRPLMDYFDVSIEDLIIVHDDMDLPVGKIRIKDKGSAGGHNGIKSIIASV 121
Query: 140 RGNREFARLRIGIGRP 155
G + F R+R+GI P
Sbjct: 122 -GTQNFDRIRVGIDHP 136
>gi|406027394|ref|YP_006726226.1| peptidyl-tRNA hydrolase, PTH1 family [Lactobacillus buchneri CD034]
gi|405125883|gb|AFS00644.1| peptidyl-tRNA hydrolase, PTH1 family [Lactobacillus buchneri CD034]
Length = 186
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y GTRHN GF +++ FA+S IS+ T A +G GFV + V++ +P
Sbjct: 3 MIVGLGNIGPQYDGTRHN-TGFMVVEQFAKSHDISIKTRKMNAKYGSGFVNNTKVMVVEP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + PL Y+ + + +++ HDDM LP G +R++ G GGHNG+KS++ +
Sbjct: 62 TTFMNDSGLAVRPLMDYFDVSIEDLIIVHDDMDLPVGKIRIKDKGSAGGHNGIKSIIASV 121
Query: 140 RGNREFARLRIGIGRP 155
G + F R+R+GI P
Sbjct: 122 -GTQNFDRIRVGIDHP 136
>gi|298530962|ref|ZP_07018363.1| peptidyl-tRNA hydrolase [Desulfonatronospira thiodismutans ASO3-1]
gi|298508985|gb|EFI32890.1| peptidyl-tRNA hydrolase [Desulfonatronospira thiodismutans ASO3-1]
Length = 216
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 113/199 (56%), Gaps = 10/199 (5%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMID-AFAESQGISMNTVHC-----KATFGQGF 68
+ P L GLGNPG++Y+ TRHN +GF ++D A ++ V C + T +
Sbjct: 11 ITGPRLIAGLGNPGNRYRNTRHN-MGFLVLDHAMDSARWEPGEHVRCLDEKNEFTLWEWT 69
Query: 69 VGDAPV--LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGH 126
+ + P L KP TYMN SG++ +A + +LV HD++ LP G ++L+ GG
Sbjct: 70 MPEDPAARYLLKPMTYMNRSGKAVARVADRLNILAESILVVHDEVDLPLGRVKLKFGGGL 129
Query: 127 GGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
GHNGL+S+ ++ G+R+FARLRIG+GRP Q+ ++LQKF + + +L V
Sbjct: 130 AGHNGLRSIADHL-GSRDFARLRIGVGRPEDQISLSEYVLQKFTPEEQNDLKDSLDRSVA 188
Query: 187 VLKLLLSKGLTESARHFNT 205
L+LL + G + +H N+
Sbjct: 189 ALRLLFTHGKQPALQHINS 207
>gi|453363029|dbj|GAC81140.1| peptidyl-tRNA hydrolase [Gordonia malaquae NBRC 108250]
Length = 188
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG Y+ TRHN +G + D+ S G +VH + A +G PVL+A
Sbjct: 3 LIVGLGNPGPSYEKTRHN-IGAMVADSLVFSYGEKF-SVHKRSGAETATVRIGGEPVLVA 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
K + YMN++G GPLAAYY + ++V HD++ + G +RL+ GG GGHNGL+S+ +
Sbjct: 61 KARAYMNVTGRQIGPLAAYYSVAPADLIVLHDELDIDFGQVRLKQGGGEGGHNGLRSITS 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+ DP F+L+ F + A+ ++ + GV+ +LL+ GL
Sbjct: 121 AV-GTRDYLRVRLGIGRPPGRQDPADFVLKPFPSAAKSDVELLIANGVDAAELLVQNGL- 178
Query: 198 ESARHFNTIQKY 209
E A+ NT+ +
Sbjct: 179 EGAQ--NTVHAW 188
>gi|335427877|ref|ZP_08554797.1| peptidyl-tRNA hydrolase [Haloplasma contractile SSD-17B]
gi|334893803|gb|EGM32012.1| peptidyl-tRNA hydrolase [Haloplasma contractile SSD-17B]
Length = 185
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 6/187 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAPVLLAK 78
+ VGLGNPG KYK TRHN VGF ++D + + + KA Q + + V+L K
Sbjct: 3 IIVGLGNPGKKYKDTRHN-VGFMVLDEYTRRNNLVFEHKSKYKAECVQTLINNEKVILLK 61
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES L YY + +L+ +DD+ L CG +R + G GGHNG+KS++N
Sbjct: 62 PLTYMNLSGESVKILKDYYNVDDQDILIIYDDLDLSCGKIRFKQKGSSGGHNGIKSIINC 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKA-FLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
++ F RL+IGI R ++ P ++L KF R + +++E + ++ +SK +
Sbjct: 122 I-NSKTFHRLKIGIER--SEVIPVVNYVLGKFTKEQRPHVLESIEESILGIEDWISKDIA 178
Query: 198 ESARHFN 204
+N
Sbjct: 179 YVMNKYN 185
>gi|425451024|ref|ZP_18830846.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 7941]
gi|389767884|emb|CCI06852.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 7941]
Length = 208
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 110/193 (56%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +D+ A G+S F QGF+ GD P
Sbjct: 12 PQLIIGLGNPEPKYDRTRHN-IGFEAVDSLARDWGLSWRE---NKRF-QGFIAEGDGPFP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F + I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGK-SSEKATISHVLGRFTPQENQVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|329948077|ref|ZP_08294978.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328523216|gb|EGF50317.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 200
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 113/196 (57%), Gaps = 11/196 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM-NTVHCKATFGQGFVGDAP---- 73
WL VGLGNPG +Y RHN VG ++D AE G N +A +G +G P
Sbjct: 5 WLVVGLGNPGTRYARNRHN-VGHMVLDVLAERTGSRFSNHKKARARVAEGRLGMMPGGAP 63
Query: 74 ---VLLAKPQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
V+LA+P MNLSG L +YY + P +R+LV HD++ LP LRL+ GG GGH
Sbjct: 64 GPRVILAEPSVLMNLSGGPVSGLVSYYGIDPTSRLLVIHDELDLPAHELRLKRGGGEGGH 123
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
NGL+S+ + +++ARLR+GIGRPPG+ DP F+L F R + L++ + ++
Sbjct: 124 NGLRSISKSV-STKDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAVE 182
Query: 190 LLLSKGLTESARHFNT 205
+++ G ++ RH +
Sbjct: 183 QVVTLGFDDAQRHLHA 198
>gi|220915258|ref|YP_002490562.1| peptidyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|254783847|sp|B8J804.1|PTH_ANAD2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219953112|gb|ACL63496.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 192
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 5/189 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG++Y TRHN VGF + D A+ G S + A + +G V + KP
Sbjct: 3 LVVGLGNPGEEYARTRHN-VGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGE+ G ++KL L+ ++V HDD+ L ++L+ GGHGGHNG+KSV N
Sbjct: 62 QTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSV-NAH 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G +
Sbjct: 121 VGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELG---A 177
Query: 200 ARHFNTIQK 208
AR N + +
Sbjct: 178 ARAMNQVNR 186
>gi|451943682|ref|YP_007464318.1| peptidyl-tRNA hydrolase [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
gi|451903069|gb|AGF71956.1| peptidyl-tRNA hydrolase [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
Length = 184
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAE---SQGISMNTVHCK-----ATFGQGFV 69
P L VGLGNPG KY TRHN +G +++ A+ S+ TVH + A G +
Sbjct: 5 PILIVGLGNPGPKYADTRHN-IGVRVLEELADRVRPMPASL-TVHKRSNTEIAELPAGRL 62
Query: 70 GDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
G V+LA+ +++MNLSG LA Y+ + V+V HD++ L GV+RLR GG GH
Sbjct: 63 GARKVVLARTRSFMNLSGGPVKALATYFAVAPADVIVIHDELELDFGVVRLRTGGGDHGH 122
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN 170
NGLKSV + G +++ RL IGIGRPPG+MDP F+L+ F
Sbjct: 123 NGLKSVTKSL-GTKDYQRLAIGIGRPPGRMDPAGFVLKPFT 162
>gi|397904463|ref|ZP_10505374.1| Peptidyl-tRNA hydrolase [Caloramator australicus RC3]
gi|397162473|emb|CCJ32708.1| Peptidyl-tRNA hydrolase [Caloramator australicus RC3]
Length = 190
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 114/187 (60%), Gaps = 4/187 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG Y+ TRHN VGFE+I+ AE G S+N + K FG+G + VLL K
Sbjct: 2 YLVVGLGNPGRDYEKTRHN-VGFEVIERLAEKLGASVNKIKFKGLFGEGTFDNKKVLLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSGES +YK+ + ++V +DD+ + G LR+R +G GGHNG+K+++ +
Sbjct: 61 PSTFMNLSGESLIEAVEFYKINIENIIVVYDDVDIDVGRLRIRPSGSDGGHNGMKNIIYH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ N+ F R+RIGIG+P + D + +L KF+ I+ + + + ++ G+
Sbjct: 121 LQDNK-FPRVRIGIGKP--KFDMISHVLGKFSKEEEVLIEKVIDAASDAVLEIIKNGIQS 177
Query: 199 SARHFNT 205
+ +N+
Sbjct: 178 AMNKYNS 184
>gi|377574473|ref|ZP_09803500.1| peptidyl-tRNA hydrolase [Mobilicoccus pelagius NBRC 104925]
gi|377536810|dbj|GAB48665.1| peptidyl-tRNA hydrolase [Mobilicoccus pelagius NBRC 104925]
Length = 195
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP----- 73
WL VGLGNPG Y G RHN VG ++D G S++ +A + +G P
Sbjct: 4 WLLVGLGNPGPSYAGNRHN-VGAMVVDELVRRGGTSLSRHKTRAQVAEFRLGVMPGGAPG 62
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+ A P +YMN SG LA Y+ +P R++V HD++ +P +RL+ GG GGHNG
Sbjct: 63 PKVVAAVPLSYMNESGGPVSALAQYFSVPPERLVVIHDELDIPFDEVRLKRGGGEGGHNG 122
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
L+S+ + G +E+ R+R+GIGRPPG+MDP +L+ F+A R+ + L + + +
Sbjct: 123 LRSITKSI-GTKEYTRVRVGIGRPPGRMDPADHVLRNFSATERKVLPLLLDTAADAAEAV 181
Query: 192 LSKGLTESARHFNT 205
+ +GLT + + F++
Sbjct: 182 VIEGLTAAQQRFHS 195
>gi|7388025|sp|O85235.1|PTH_LACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3511016|gb|AAD03811.1| unknown [Lactobacillus sakei]
Length = 177
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 7/175 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY T+HN +GF +ID E +++N +A +G VLL KP
Sbjct: 3 MIVGLGNPGSKYAKTKHN-IGFMVIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL +YY++ ++ +LV DDM L G LRLR G GGHNG+KS++ +
Sbjct: 62 LTFMNDSGRSVGPLMSYYQVGIDELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIAHT 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNA----IARERIDTALQEGVEVLKL 190
+ ++ F RL+IGI + P + ++L F+ + + ID A +E +K+
Sbjct: 122 K-SQTFKRLKIGI-QHPQKSTVVNWVLTPFDKDGAPVINQAIDQACEESTTGVKM 174
>gi|384084007|ref|ZP_09995182.1| peptidyl-tRNA hydrolase [Acidithiobacillus thiooxidans ATCC 19377]
Length = 189
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 8/186 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM---NTVHCKATFGQGFVGDAPVL 75
WL GLGNPG +Y TRHN GF + FAE G S+ + HC A Q +
Sbjct: 3 WLLAGLGNPGAEYARTRHN-AGFWALQTFAEKAGASLRLESRWHCLAATTQN--SGQQLG 59
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L PQ +MN SG +AA+YK+P R+LV HD++ LP G RL+ +GGHGGHNGL+
Sbjct: 60 LCLPQDFMNRSGAPVQAMAAFYKVPAARILVIHDELDLPPGTARLKWSGGHGGHNGLRD- 118
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
++ G R++ RLR+GIG P + ++L + + + ID A+ + VL L G
Sbjct: 119 LDRALGTRDYWRLRLGIGHPGHKDAVIHYVLGAPSTMDKSAIDLAIDRSLAVLPEFLD-G 177
Query: 196 LTESAR 201
+++A+
Sbjct: 178 RSDAAQ 183
>gi|193214407|ref|YP_001995606.1| peptidyl-tRNA hydrolase [Chloroherpeton thalassium ATCC 35110]
gi|193087884|gb|ACF13159.1| Aminoacyl-tRNA hydrolase [Chloroherpeton thalassium ATCC 35110]
Length = 202
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 7/186 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY GTRHN +GFE++DA A G + + F + VLL KP
Sbjct: 13 LIVGLGNPGSKYDGTRHN-IGFEVVDALAARFGEDFRSGKGEYDFCKTKHRGEEVLLVKP 71
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSG++ A+YK+ + +LV DD LP G +R+R +G GG NGLK+++
Sbjct: 72 TTYMNLSGKAVRHAMAFYKISILDILVICDDFNLPLGAVRIRPSGTDGGQNGLKNII-QL 130
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNA----IARERIDTALQEGVEVLKLLLSKG 195
G +FARLR+GIG P Q + +F+L KF I E L+ LSK
Sbjct: 131 VGRNDFARLRVGIGAPKVQ-NASSFVLGKFGESELPIVEETARFCADAACSFLETDLSKT 189
Query: 196 LTESAR 201
+T+ R
Sbjct: 190 MTKFNR 195
>gi|197120547|ref|YP_002132498.1| peptidyl-tRNA hydrolase [Anaeromyxobacter sp. K]
gi|238689897|sp|B4ULC2.1|PTH_ANASK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|196170396|gb|ACG71369.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter sp. K]
Length = 192
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 5/189 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG++Y TRHN VGF + D A+ G S + A + +G V + KP
Sbjct: 3 LVVGLGNPGEEYARTRHN-VGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGE+ G ++KL L+ ++V HDD+ L ++L+ GGHGGHNG+KSV N
Sbjct: 62 QTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSV-NAH 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G +
Sbjct: 121 VGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELG---A 177
Query: 200 ARHFNTIQK 208
AR N + +
Sbjct: 178 ARAMNQVNR 186
>gi|90962333|ref|YP_536249.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
gi|119390953|sp|Q1WSG3.1|PTH_LACS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|90821527|gb|ABE00166.1| Peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
Length = 185
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 103/190 (54%), Gaps = 8/190 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN KY+GTRHN VGF +++ F E G + N + + F+ +++ KP
Sbjct: 3 MIVGLGNIEKKYEGTRHN-VGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + PL Y+ L +++ HDDM L G LRLR G GGHNG+KS++++
Sbjct: 62 TTYMNESGRAVRPLMDYFNLTTEDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+R+GI P +M ++L +F ++D L V L + E+
Sbjct: 122 -GTEKFKRVRVGIDHPQ-KMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWI-----EN 174
Query: 200 ARHFNTIQKY 209
NT+ ++
Sbjct: 175 DDFMNTMNRF 184
>gi|168704118|ref|ZP_02736395.1| peptidyl-tRNA hydrolase [Gemmata obscuriglobus UQM 2246]
Length = 213
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY GTRHN VGF++ID A G+ +A + GD VLL KP
Sbjct: 3 VIVGLGNPGPKYAGTRHN-VGFDVIDYLANGPGVGSARERFEALISETKEGDETVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MNLSG + + +YK+P+ VLV DD+ LP G LR+R G HGG NGL+++
Sbjct: 62 LTFMNLSGRAVRAILDFYKVPVENVLVICDDLNLPLGKLRMRIKGSHGGQNGLRNIQEQL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKF 169
G + RLR+G+G+ P D F+L KF
Sbjct: 122 -GTDAYCRLRVGLGQ-PAVGDAVDFVLGKF 149
>gi|428771882|ref|YP_007163670.1| peptidyl-tRNA hydrolase [Cyanobacterium stanieri PCC 7202]
gi|428686161|gb|AFZ46021.1| peptidyl-tRNA hydrolase [Cyanobacterium stanieri PCC 7202]
Length = 198
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 4/192 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMN-TVHCKATFGQGFV-GDA 72
+ P L VGLGNP KY TRHN +GFE++D A+ G + A F +G +
Sbjct: 9 IVIPNLIVGLGNPEPKYDKTRHN-IGFEIVDYLADKWGFNWQKNSKFNALFAEGIAPNNQ 67
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V L KP TYMN SG+S + +YKL + +LV +DDM +P G +RLR +G GGHNG+
Sbjct: 68 KVRLLKPLTYMNRSGQSVRAVCDWYKLTPDGILVVYDDMDIPLGKIRLRLSGSAGGHNGM 127
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
KS++++ G ++F R RIGIG+ G+ +L +F+ ID + ++L L
Sbjct: 128 KSIISHL-GGQKFPRCRIGIGKSEGKKQTVGHVLGRFSPAEMPVIDELMGVTQSAIELSL 186
Query: 193 SKGLTESARHFN 204
G+ ++ +N
Sbjct: 187 KDGIEKAMSLYN 198
>gi|239637488|ref|ZP_04678462.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
gi|239596933|gb|EEQ79456.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
Length = 190
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 7/189 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGN G +++ TRHN +GFE+ID E +++ K + + VLL +P
Sbjct: 4 IVGLGNIGKRFELTRHN-IGFEVIDYILERHRFTLDKQKFKGAYTIERMNGDKVLLIEPM 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
T MNLSGE+ PL YY + ++ ++V +DD+ L G +RLR G GGHNG+KS++
Sbjct: 63 TMMNLSGEAVAPLMDYYNVDVDDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIKML- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G +F R+RIG+GRP M ++LQ+F+ ++ ++ + + E++
Sbjct: 122 GTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMITMEKVIEHSANAV-----ESFIETS 176
Query: 201 RHFNTIQKY 209
R N + +Y
Sbjct: 177 RFDNVMNEY 185
>gi|81429217|ref|YP_396218.1| peptidyl-tRNA hydrolase [Lactobacillus sakei subsp. sakei 23K]
gi|119390954|sp|Q38V72.1|PTH_LACSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78610860|emb|CAI55912.1| Aminoacyl-tRNA hydrolase (Peptidyl-tRNA hydrolase) [Lactobacillus
sakei subsp. sakei 23K]
Length = 185
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY T+HN +GF +ID E +++N +A +G VLL KP
Sbjct: 3 MIVGLGNPGSKYAKTKHN-IGFMVIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL +YY++ ++ +LV DDM L G LRLR G GGHNG+KS++ +
Sbjct: 62 LTFMNDSGRSVGPLMSYYQVGIDELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIAHT 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
+ ++ F RL+IGI + P + ++L F+ I+ A+ + E +
Sbjct: 122 K-SQTFKRLKIGI-QHPQKSTVVNWVLTPFDKDGAPVINQAIDQACEAI 168
>gi|212703169|ref|ZP_03311297.1| hypothetical protein DESPIG_01210 [Desulfovibrio piger ATCC 29098]
gi|212673435|gb|EEB33918.1| aminoacyl-tRNA hydrolase [Desulfovibrio piger ATCC 29098]
Length = 197
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 16/193 (8%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAF----------AESQ-GISMNTVHCKATFGQGF 68
+ VGLGNPG++Y GTRHN GF +++ +SQ G + + +G G
Sbjct: 6 VVVGLGNPGNQYAGTRHN-CGFAFVESLLDHARREGGQVQSQNGGKFSCELWRLRYG-GL 63
Query: 69 VGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGG 128
GD L A PQT+MNLSG+ PL A++K+ ++++V HD++ +P G LR + GG+ G
Sbjct: 64 PGD--WLAAMPQTFMNLSGQCVQPLLAWHKIRPDQLVVVHDELDIPAGELRFKKGGGNAG 121
Query: 129 HNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
HNGLKS+ +F RLRIGIGRPP + D ++L + + ++I TA + +EVL
Sbjct: 122 HNGLKSITQML-ATPDFYRLRIGIGRPPQKGDVINWVLGRPCSEDADKIRTATDKALEVL 180
Query: 189 KLLLSKGLTESAR 201
++ KGL + R
Sbjct: 181 EIFAKKGLEAAVR 193
>gi|220904722|ref|YP_002480034.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254783864|sp|B8J0S9.1|PTH_DESDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219869021|gb|ACL49356.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 229
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVH--------CKATFGQGFVGD 71
+ VGLGNPG +Y+GTRHN GF +IDAF + G TV C+ + D
Sbjct: 6 VLVGLGNPGARYEGTRHN-CGFALIDAFVDF-GYRHGTVDEMNGGKFSCQLWRVRLPRLD 63
Query: 72 APVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
L AKPQT+MNLSG+ PL +++KL ++V HD++ +P G LR + GG+ GHNG
Sbjct: 64 GCWLAAKPQTFMNLSGQCVQPLLSWHKLKAADLVVAHDELDIPPGELRFKFGGGNAGHNG 123
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
LKS+ G +F RLR+GIGRPP + D ++L + E +D L ++VL
Sbjct: 124 LKSI-TELLGTPDFYRLRMGIGRPPHKGDVTNWVLGRPQGEDAENLDHILPLALDVLFAF 182
Query: 192 LSKGLTESAR 201
KGL + R
Sbjct: 183 ADKGLDSAVR 192
>gi|124268411|ref|YP_001022415.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
gi|166199361|sp|A2SKU1.1|PTH_METPP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|124261186|gb|ABM96180.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
Length = 232
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 11/191 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA-----PV 74
L VGLGNPG +Y+ TRHN GF +DA A S+ H + + G V PV
Sbjct: 4 LMVGLGNPGPEYEATRHN-AGFWWVDAVARQLKASL---HAERAY-HGLVARVNTPVGPV 58
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
L +PQTYMN+SG+S LA ++K+ +LV HD++ LP G ++L+ GGH GHNGL+
Sbjct: 59 WLLEPQTYMNVSGKSVAALARFFKIAPEEILVAHDELDLPPGEMKLKQGGGHAGHNGLRD 118
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ G+ ++ RLR+GIG P + + ++L K RE ID + + + LLS
Sbjct: 119 IHAQL-GSTDYWRLRLGIGHPGVKAEVANYVLGKPMREHREAIDACIVRSLTAVDALLSG 177
Query: 195 GLTESARHFNT 205
++++ +T
Sbjct: 178 DMSKATLRLHT 188
>gi|328956314|ref|YP_004373647.1| peptidyl-tRNA hydrolase [Coriobacterium glomerans PW2]
gi|328456638|gb|AEB07832.1| peptidyl-tRNA hydrolase [Coriobacterium glomerans PW2]
Length = 212
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 94/157 (59%), Gaps = 9/157 (5%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA------- 72
+ GLGNPG++Y TRHN GF+ +D A ++ A + D
Sbjct: 11 MIAGLGNPGEEYSETRHN-AGFQTVDELARRWQVTYWKNQLGAEVATIALSDERAGGEAR 69
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+L KPQ++MN SG LAA Y + +LV HD++ +P G +R++ GGH GHNGL
Sbjct: 70 EVVLVKPQSFMNTSGGPISKLAAAYGIEPGELLVIHDELDIPAGDVRVKIGGGHAGHNGL 129
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKF 169
+S+++ G+R+FAR+R+GIG+PPG+M F+L++F
Sbjct: 130 RSIIDKL-GSRDFARIRVGIGKPPGKMSVADFVLRRF 165
>gi|315640550|ref|ZP_07895658.1| aminoacyl-tRNA hydrolase [Enterococcus italicus DSM 15952]
gi|315483754|gb|EFU74242.1| aminoacyl-tRNA hydrolase [Enterococcus italicus DSM 15952]
Length = 192
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 96/167 (57%), Gaps = 2/167 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY+ T+HN VGF ++D A + +A F +LL KP
Sbjct: 3 MIVGLGNPGKKYEQTKHN-VGFMVVDQIANQENSVFKKTAFEAEVADFFSNGEKILLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MN SG + GPL Y+ + ++V +DD+ L G +RLR G GGHNG+KS++++
Sbjct: 62 QTFMNESGRAVGPLMTYFGVYPEELVVVYDDLDLQVGKIRLRQKGSAGGHNGIKSIISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVE 186
++ F R+++GIGRP G+ +L F+ + I + +GV+
Sbjct: 122 D-SQTFKRVKVGIGRPKGKQTVVQHVLSPFDKVDAPLIQEGIAQGVD 167
>gi|440717721|ref|ZP_20898202.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SWK14]
gi|436437144|gb|ELP30808.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SWK14]
Length = 190
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY TRHN +GF + DA S T + + + + VL+ P
Sbjct: 3 LVVGLGNPGRKYDQTRHN-IGFMVADALVRRYVGSPPTTKFEGEISECRIENEKVLVLCP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG+S +YKL +LV DD+ L G +RLR +G GG GL ++ +
Sbjct: 62 HTYMNASGQSVRKAMDFYKLSPEDILVICDDLNLETGRIRLRRSGSAGGQKGLVDIIRHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ ++ARL+IGIGRPP + ++L KF+ E ++ A+ + ++ G+TE+
Sbjct: 122 -GSEQWARLKIGIGRPPAKWQVSDYVLGKFDKTELEEMEHAIVHSCDATACWVADGVTEA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNRYN 185
>gi|422301176|ref|ZP_16388545.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9806]
gi|389790582|emb|CCI13555.1| Peptidyl-tRNA hydrolase [Microcystis aeruginosa PCC 9806]
Length = 208
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 108/193 (55%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP---- 73
P L +GLGNP KY TRHN +GFE +DA A G+S F QGF+ +
Sbjct: 12 PRLIIGLGNPEPKYDRTRHN-IGFEAVDALARDWGLSWQE---NKRF-QGFIAEGDGSLP 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRSVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGKST-EKATISHVLGRFTPQENEVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|347755343|ref|YP_004862907.1| peptidyl-tRNA hydrolase [Candidatus Chloracidobacterium
thermophilum B]
gi|347587861|gb|AEP12391.1| peptidyl-tRNA hydrolase [Candidatus Chloracidobacterium
thermophilum B]
Length = 187
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 103/188 (54%), Gaps = 7/188 (3%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG Y TRHN +GF ++DA AE G + C+A G+ +G VLLAKPQ
Sbjct: 4 VVGLGNPGATYALTRHN-IGFLVVDALAERAGRPIKLAECEALTGRITLGTEVVLLAKPQ 62
Query: 81 TYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG++ L A Y P + +L DD+ LP G LRLR G GGHNGLKS+
Sbjct: 63 TFMNASGQAVALLCAKYDCNPQHDLLAVVDDVALPFGRLRLRAKGSAGGHNGLKSLNAKL 122
Query: 140 RGNREFARLRIGIG--RPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ +ARLR+GIG P G + F+L +F+A + + + ++ + G+
Sbjct: 123 K-TEHYARLRVGIGPAHPVGNLAD--FVLSRFSAAEQSELPALTARAADAVEAWVCHGIE 179
Query: 198 ESARHFNT 205
+ FN
Sbjct: 180 LAMARFNA 187
>gi|365852726|ref|ZP_09393083.1| aminoacyl-tRNA hydrolase [Lactobacillus parafarraginis F0439]
gi|363714302|gb|EHL97835.1| aminoacyl-tRNA hydrolase [Lactobacillus parafarraginis F0439]
Length = 186
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 95/170 (55%), Gaps = 2/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y GTRHN GF +++AFA+ GI++ T A G F+ VL+ +P
Sbjct: 3 MIVGLGNIGPQYDGTRHN-TGFMVVEAFAKKHGINIKTRKMNAKLGSDFLNGTKVLVVEP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG + PL Y+ + V+V HDDM LP G +R++ G GGHNG+KS++ N
Sbjct: 62 TTFMNDSGIAVKPLMDYFDVKPEDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSIIANL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
G+ F R+R+GI P ++L +F+ A V L+
Sbjct: 122 -GSENFCRIRVGIQHPAKNNTVVNYVLGRFSKDQLPEFKMASDHAVNALE 170
>gi|386004018|ref|YP_005922297.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB423]
gi|380724506|gb|AFE12301.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis RGTB423]
Length = 191
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 105/183 (57%), Gaps = 3/183 (1%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAP 73
+A P L VGLGNP Y TRHN +GF + D A G A G
Sbjct: 1 MAEPLLVVGLGNPRANYARTRHN-LGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRS 59
Query: 74 VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLK 133
++LAKP+ YMN SG GPLA +Y + ++V HDD+ L G +RL+ GG GGHNGL+
Sbjct: 60 LVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLR 119
Query: 134 SVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
SV+ G ++F R+RIGIGRPPG+ DP AF+L+ F R + T ++ + +LL+
Sbjct: 120 SVVAAL-GTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIE 178
Query: 194 KGL 196
+G+
Sbjct: 179 QGM 181
>gi|322373974|ref|ZP_08048508.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C150]
gi|419706269|ref|ZP_14233797.1| Peptidyl-tRNA hydrolase (PTH) [Streptococcus salivarius PS4]
gi|321276940|gb|EFX54011.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C150]
gi|383283991|gb|EIC81927.1| Peptidyl-tRNA hydrolase (PTH) [Streptococcus salivarius PS4]
Length = 189
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLIAKGLGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G +R R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPIENFIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK-LLLSKGLT 197
G +EF R++IGIGRP M +L +FN I L + L L +
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGRFNEDDYATIQLTLDKVEAALNHYLKTNDFE 181
Query: 198 ESARHFN 204
++ R +N
Sbjct: 182 DTMRRYN 188
>gi|428226042|ref|YP_007110139.1| peptidyl-tRNA hydrolase [Geitlerinema sp. PCC 7407]
gi|427985943|gb|AFY67087.1| peptidyl-tRNA hydrolase [Geitlerinema sp. PCC 7407]
Length = 213
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 109/199 (54%), Gaps = 16/199 (8%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDA----- 72
P L +GLGNPG KY TRHN +GF+ ID A +S++ + F QG VG
Sbjct: 11 PQLIIGLGNPGSKYDHTRHN-IGFDAIDRLASGWSVSLSE---ERKF-QGLVGSGRGPHG 65
Query: 73 -PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KP T+MN SG+S + +YKLP VLV +DDM LP G LRLR +G G HNG
Sbjct: 66 DKIHLLKPLTFMNRSGQSVRAVLDWYKLPPESVLVIYDDMDLPLGKLRLRLSGSAGSHNG 125
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPG----QMDPKAFLLQKFNAIARERIDTALQEGVEV 187
+KS++ + G + F RLRIGIG P D + +L +F A + + L EV
Sbjct: 126 MKSLVAHL-GTQNFPRLRIGIGAPKTPSGHDKDTVSHVLGQFAAEEKPLVTAVLNIVTEV 184
Query: 188 LKLLLSKGLTESARHFNTI 206
++ L +G+ + +N +
Sbjct: 185 TEVCLGRGVEMAMNRYNNL 203
>gi|329122082|ref|ZP_08250690.1| aminoacyl-tRNA hydrolase [Dialister micraerophilus DSM 19965]
gi|327466889|gb|EGF12405.1| aminoacyl-tRNA hydrolase [Dialister micraerophilus DSM 19965]
Length = 194
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF++++ F+ +S+ + ++ AKP
Sbjct: 7 LIVGLGNPGKEYEKTRHN-IGFDVLELFSHRNKLSLWKNFMNSEIVTVMNNGEKIIFAKP 65
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGES G +A YYK+ + V DD+ LP G +R+R G GGHNGLKS+M +
Sbjct: 66 QTYMNNSGESIGDIAKYYKIEPEDIWVICDDLDLPVGKVRIRKKGSAGGHNGLKSIMAHL 125
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ + F R R+GIG P +L + ++I+ A ++ E ++ L + + ++
Sbjct: 126 Q-SENFCRFRVGIGHPKNGHTVIEHVLGRPYGEDIKKIEEAEEKVAESIEFALKENIDKA 184
Query: 200 ARHFN 204
+FN
Sbjct: 185 MNYFN 189
>gi|304440476|ref|ZP_07400364.1| aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371042|gb|EFM24660.1| aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 190
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN +GF ID A+ +G ++ + K+ G+ + V+L K
Sbjct: 2 FVIVGLGNPGSKYELTRHN-IGFLTIDRLAKREGARVDRIKFKSLIGEININGEKVILVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MNLSGE+ + +YK+ L +LV DD+ + LRL+ +G G HNG+KS++ N
Sbjct: 61 PQTFMNLSGEAVREVMNFYKVDLKNLLVVVDDIDITPFTLRLKKSGSAGSHNGMKSIIYN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
++ F RL++G+G ++D ++L F +E+++ + + + + G
Sbjct: 121 LNDDK-FPRLKVGVGNNERKIDLANYVLSGFEKKDQEKLENIIDASCDAILDFIKHGADY 179
Query: 199 SARHFNT 205
++N
Sbjct: 180 VMNNYNN 186
>gi|309777977|ref|ZP_07672919.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 3_1_53]
gi|308914266|gb|EFP60064.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 3_1_53]
Length = 186
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN GF ++DA AE + + KA +G VLL KP
Sbjct: 3 LIVGLGNPGKEYEMTRHNS-GFCVLDAIAEECRVDIAQKKFKALIANTRIGSESVLLMKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGE+ +YKL +LV +DD+ LP G +RLR G GG NG+K+++ +
Sbjct: 62 QTFMNLSGEAVRAAMDFYKLSAENLLVIYDDLDLPVGKIRLRAQGSAGGQNGMKNIIRHI 121
Query: 140 RGNREFARLRIGIGR 154
G +EF R+R+GIG+
Sbjct: 122 -GTQEFDRIRVGIGK 135
>gi|322515788|ref|ZP_08068733.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis ATCC 49124]
gi|322125750|gb|EFX97068.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis ATCC 49124]
Length = 189
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAPVLLAK 78
L VGLGNPG KY TRHN VGF ID A+ G++ + KA F+ V K
Sbjct: 4 LVVGLGNPGSKYHETRHN-VGFMAIDLMAKELGLTFSEERTFKAEVASTFLNGEKVYFVK 62
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P T+MNLSG + L AYY +P+ +V +DD+ + G LR R G GGHNG+KS++
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIPMEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFN 170
G +EF R++IGIGRP M +L KF+
Sbjct: 123 -TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFS 153
>gi|183601452|ref|ZP_02962822.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683507|ref|YP_002469890.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191048|ref|YP_002968442.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196454|ref|YP_002970009.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|384194041|ref|YP_005579787.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
BLC1]
gi|384195606|ref|YP_005581351.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis V9]
gi|387820914|ref|YP_006300957.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
B420]
gi|387822591|ref|YP_006302540.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bi-07]
gi|423679574|ref|ZP_17654450.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis BS
01]
gi|254783852|sp|B8DTI5.1|PTH_BIFA0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183219058|gb|EDT89699.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219621157|gb|ACL29314.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249440|gb|ACS46380.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251008|gb|ACS47947.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295794037|gb|ADG33572.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis V9]
gi|345282900|gb|AEN76754.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
BLC1]
gi|366041218|gb|EHN17722.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis BS
01]
gi|386653615|gb|AFJ16745.1| Peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
B420]
gi|386655199|gb|AFJ18328.1| Peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bi-07]
Length = 199
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 109/195 (55%), Gaps = 10/195 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPV 74
WL VGLGNPG KY+ TRHN +GF ++ A+ I A G+G + A V
Sbjct: 6 WLIVGLGNPGAKYRNTRHN-MGFMTVNELAKRWSIHFANHKGLADLGKGTMSLNGQTAKV 64
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
L KP TYMN SG++ + YY + L+ ++V HDDM L G ++L+ G GGHNG+KS
Sbjct: 65 FLCKPLTYMNDSGQAVQSIREYYHINLDHIVVIHDDMDLEFGRIKLKSGGSAGGHNGIKS 124
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKA----FLLQKFNAIARERIDTALQEGVEVLKL 190
+ + ++AR+R+G+G D ++L +FNA R+++ L +G + +
Sbjct: 125 IDRCLH-SPDYARVRMGVGHASRSGDAHDNTINWVLGEFNAAQRKQLPEFLADGADAAET 183
Query: 191 LLSKGLTESARHFNT 205
++ +GLT++ FN
Sbjct: 184 IVFEGLTKAQDKFNA 198
>gi|282882227|ref|ZP_06290866.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
gi|281297992|gb|EFA90449.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
Length = 192
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG Y+ T+HN +GF +D AE ++MN + K G+ +G ++L K
Sbjct: 5 FVIAGLGNPGKDYEKTKHN-IGFSTVDKIAEKLSVNMNKIKFKGLLGETRIGQNRLILLK 63
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQT+MN SGES +YK+ + ++V DD+ + G L+++ G G HNGLKS++N+
Sbjct: 64 PQTFMNNSGESIRMCLDFYKVDVKNLIVIVDDIDINFGQLKIKKEGSAGTHNGLKSIVNH 123
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
++ F R+++GIG+ D F+L F++ + ID A + ++ KG+
Sbjct: 124 L-SSKSFPRIKVGIGQKKEGEDLANFVLSNFSSNDAKHIDKATDAARDAAIDIVEKGIEY 182
Query: 199 SARHFN 204
+ +N
Sbjct: 183 TMNAYN 188
>gi|145593349|ref|YP_001157646.1| aminoacyl-tRNA hydrolase [Salinispora tropica CNB-440]
gi|145302686|gb|ABP53268.1| peptidyl-tRNA hydrolase [Salinispora tropica CNB-440]
Length = 196
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 5/185 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISM---NTVHCKATFGQGFVGDAPV 74
PWL VGLGNPG +Y G RHN VGF + D G + G+ +G +
Sbjct: 7 PWLVVGLGNPGRQYAGNRHN-VGFLVADLLVGRLGARFGRHKRAMAEVAEGRSGLGGPRL 65
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+L KP TYMNLSG + LA +YK+P RV+ +D++ +P G +R++ GG GGHNGL+S
Sbjct: 66 VLVKPLTYMNLSGAAVAGLAQFYKVPPARVVAVYDELDIPYGQVRVKFGGGEGGHNGLRS 125
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ + G +E+AR+R GIGRPP + DP F+L F + R+ +D + +V++ ++ +
Sbjct: 126 MTKSL-GTKEYARVRFGIGRPPARRDPADFVLSDFGTVERKELDFLVDRAADVVESVVLR 184
Query: 195 GLTES 199
G+ +
Sbjct: 185 GVEPT 189
>gi|415705386|ref|ZP_11460657.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 75712]
gi|388052108|gb|EIK75132.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 75712]
Length = 199
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 10/194 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPV 74
WL VGLGNPG KY+GTRHN +GF + D +E IS + + G+G + A
Sbjct: 6 WLIVGLGNPGSKYEGTRHN-MGFMVADVLSERWSISFSDHKGLSKLGKGVMNLDGKSAKF 64
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
LAKP T+MN SG + +++YY++ + +++ HDDM L G ++++ G GGHNG++S
Sbjct: 65 FLAKPLTFMNDSGAAVSSISSYYQIETDHIVIIHDDMDLDFGRIKVKSGGSAGGHNGIRS 124
Query: 135 VMNNFRGNREFARLRIGIGRPP----GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+ + G ++AR+R+G+G + ++L F + + L +G + ++
Sbjct: 125 IDRSL-GTPQYARVRMGVGHAQRGARAHDNTVNWVLGGFAGAQKSELPNFLADGADAVES 183
Query: 191 LLSKGLTESARHFN 204
++ +GL+ + HFN
Sbjct: 184 VIFRGLSATQEHFN 197
>gi|385801785|ref|YP_005838188.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis HMP9231]
gi|333393544|gb|AEF31462.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis HMP9231]
Length = 199
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 10/194 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPV 74
WL VGLGNPG KY+GTRHN +GF + D +E IS + + G+G + A
Sbjct: 6 WLIVGLGNPGSKYEGTRHN-MGFMVADVLSERWSISFSDHKGLSKLGKGVMNLDGKSAKF 64
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
LAKP T+MN SG + +++YY++ + +++ HDDM L G ++++ G GGHNG++S
Sbjct: 65 FLAKPLTFMNDSGAAVSSISSYYQIETDHIVIIHDDMDLDFGRIKVKSGGSAGGHNGIRS 124
Query: 135 VMNNFRGNREFARLRIGIGRPP----GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+ + G ++AR+R+G+G + ++L F + + L +G + ++
Sbjct: 125 IDRSL-GTPQYARVRMGVGHAQRGAHAHDNTVNWVLGGFAGAQKSELPNFLADGADAVES 183
Query: 191 LLSKGLTESARHFN 204
++ +GL+ + HFN
Sbjct: 184 VIFRGLSTTQEHFN 197
>gi|308235055|ref|ZP_07665792.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14018 = JCM
11026]
gi|311114597|ref|YP_003985818.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14019]
gi|415702373|ref|ZP_11458595.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 284V]
gi|415707320|ref|ZP_11462137.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 0288E]
gi|415712010|ref|ZP_11464506.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 55152]
gi|415715375|ref|ZP_11465886.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 1400E]
gi|417556688|ref|ZP_12207745.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis 315-A]
gi|310946091|gb|ADP38795.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14019]
gi|333602376|gb|EGL13806.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis 315-A]
gi|388053702|gb|EIK76682.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 284V]
gi|388053859|gb|EIK76820.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 0288E]
gi|388057237|gb|EIK80069.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 55152]
gi|388058406|gb|EIK81198.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 1400E]
Length = 199
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 10/194 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPV 74
WL VGLGNPG KY+GTRHN +GF + D +E IS + + G+G + A
Sbjct: 6 WLIVGLGNPGSKYEGTRHN-MGFMVADVLSERWSISFSDHKGLSKLGKGVMNLDGKSAKF 64
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
LAKP T+MN SG + +++YY++ + +++ HDDM L G ++++ G GGHNG++S
Sbjct: 65 FLAKPLTFMNDSGAAVSSISSYYQIETDHIVIIHDDMDLDFGRIKVKSGGSAGGHNGIRS 124
Query: 135 VMNNFRGNREFARLRIGIGRPP----GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKL 190
+ + G ++AR+R+G+G + ++L F + + L +G + ++
Sbjct: 125 IDRSL-GTPQYARVRMGVGHAQRGAHAHDNTVNWVLGGFAGAQKSELPNFLADGADAVES 183
Query: 191 LLSKGLTESARHFN 204
++ +GL+ + HFN
Sbjct: 184 VIFRGLSATQEHFN 197
>gi|441522688|ref|ZP_21004330.1| peptidyl-tRNA hydrolase [Gordonia sihwensis NBRC 108236]
gi|441457701|dbj|GAC62291.1| peptidyl-tRNA hydrolase [Gordonia sihwensis NBRC 108236]
Length = 188
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 116/186 (62%), Gaps = 6/186 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG Y+ TRHN VG + D S G +VH + A +G PVL+A
Sbjct: 3 LIVGLGNPGPAYEKTRHN-VGAMVADGLVSSYGEKF-SVHKRSGALTATVRIGGEPVLVA 60
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
K +TYMN++G GPLA+YY + ++V HD++ + G +RL+ GG GGHNGL+S+
Sbjct: 61 KSRTYMNVTGRQIGPLASYYSVAPGDLIVLHDELDIDFGSVRLKLGGGEGGHNGLRSISQ 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+ DP ++L+ F A+ ++ + GV+ +LL+ +GL
Sbjct: 121 TL-GTRDYLRVRLGIGRPPGRQDPADYVLKPFPGSAKAEVELLVANGVDAAELLVKQGL- 178
Query: 198 ESARHF 203
E+A++
Sbjct: 179 EAAQNV 184
>gi|379058362|ref|ZP_09848888.1| peptidyl-tRNA hydrolase [Serinicoccus profundi MCCC 1A05965]
Length = 199
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 116/196 (59%), Gaps = 10/196 (5%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVGDAP--- 73
PWL VGLGNPG +Y G RHN VG +++ A G S+ +A + +G AP
Sbjct: 5 PWLVVGLGNPGTRYAGNRHN-VGAMVVEELARQSGASLRQHKAGQAWAAEVRLGTAPGGL 63
Query: 74 ----VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGH 129
+LA+P TYMN+SG LA +YK+P +V+V HD++ + G +RL+ GG GGH
Sbjct: 64 PGPRAVLARPMTYMNVSGGPVSGLATFYKIPTEQVVVVHDELDIEPGQVRLKRGGGEGGH 123
Query: 130 NGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
NGL+S+ + G++++ R+R+GIGRPPG+ DP ++L F R + + +GV+ +
Sbjct: 124 NGLRSISQSL-GSKDYLRVRLGIGRPPGRQDPADYVLSDFPTKDRVETELLVGDGVDAVV 182
Query: 190 LLLSKGLTESARHFNT 205
L GL + + F++
Sbjct: 183 DLAHLGLEATQQRFHS 198
>gi|404493645|ref|YP_006717751.1| peptidyl-tRNA hydrolase [Pelobacter carbinolicus DSM 2380]
gi|119390973|sp|Q3A314.1|PTH_PELCD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77545681|gb|ABA89243.1| peptidyl-tRNA hydrolase [Pelobacter carbinolicus DSM 2380]
Length = 191
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GF + FA+ G+S+ + G G ++ P
Sbjct: 3 LVVGLGNPGPEYAATRHN-IGFLVAQKFAQQMGVSLKRQAYQGIVGTGRADGQETMVLLP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG S + + V+V HD++ LP G +R++ GGHGGHNGL+S++ +
Sbjct: 62 QTYMNRSGVSVVSACKSKGIAVEDVVVIHDEIDLPFGSIRIKVGGGHGGHNGLRSIV-DL 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G R+F R+R+G+GRP GQ+D ++L +F++ + ++D L+ V+ L++LL KG ++
Sbjct: 121 LGCRDFLRVRMGVGRPQGQVDVAKYVLGQFSSTEKSQLDNVLENSVKALEVLLQKGAQQA 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>gi|421614200|ref|ZP_16055265.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH28]
gi|408495066|gb|EKJ99659.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH28]
Length = 190
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG KY TRHN +GF + DA S T + + + + VL+ P
Sbjct: 3 LVVGLGNPGRKYDQTRHN-IGFMVADALVRRYVGSPPTTKFEGEISECRIENEKVLVLCP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG+S +YKL +LV DD+ L G +RLR +G GG GL ++ +
Sbjct: 62 HTYMNASGQSVRKAMDFYKLSPEDILVICDDLNLETGRVRLRRSGSAGGQKGLVDIIRHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ ++ARL+IGIGRPP + ++L KF+ E ++ A+ + ++ G+TE+
Sbjct: 122 -GSEQWARLKIGIGRPPAKWQVSDYVLGKFDKTELEEMEHAIVHSCDATACWVADGVTEA 180
Query: 200 ARHFN 204
+N
Sbjct: 181 MNRYN 185
>gi|390439968|ref|ZP_10228329.1| Peptidyl-tRNA hydrolase [Microcystis sp. T1-4]
gi|389836615|emb|CCI32453.1| Peptidyl-tRNA hydrolase [Microcystis sp. T1-4]
Length = 208
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 109/193 (56%), Gaps = 13/193 (6%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFV--GDAP-- 73
P L +GLGNP KY TRHN +GFE +DA A +S F QGF+ GD P
Sbjct: 12 PRLIIGLGNPEPKYDRTRHN-IGFEAVDALARDWRLSWQE---NKRF-QGFIAEGDGPPW 66
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
+ L KPQTYMN SG+S + +YKL +LV +DDM LP G LR+R +G GGHNG
Sbjct: 67 GKIRLLKPQTYMNRSGQSVRAVLDWYKLAPESILVIYDDMDLPLGRLRIRLSGSAGGHNG 126
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
+KS++ + G FARLRIGIG+ + + +L +F E I L + ++L
Sbjct: 127 IKSMIAHV-GTENFARLRIGIGKST-EKATISHVLGRFTPQENEVILKVLDLSRKAIELG 184
Query: 192 LSKGLTESARHFN 204
L +GL ++ +N
Sbjct: 185 LKQGLQKAMSLYN 197
>gi|254555606|ref|YP_003062023.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum JDM1]
gi|300768956|ref|ZP_07078847.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179636|ref|YP_003923764.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|418274205|ref|ZP_12889703.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448820207|ref|YP_007413369.1| Peptidyl-tRNA hydrolase [Lactobacillus plantarum ZJ316]
gi|254044533|gb|ACT61326.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum JDM1]
gi|300493477|gb|EFK28654.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045127|gb|ADN97670.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|376009771|gb|EHS83097.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448273704|gb|AGE38223.1| Peptidyl-tRNA hydrolase [Lactobacillus plantarum ZJ316]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 93/161 (57%), Gaps = 3/161 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y TRHN VGF ++D A ++ T +A F +LL KP
Sbjct: 3 MIVGLGNIGRQYAQTRHN-VGFMIVDELASKLNVTFQTSKFEAQVATAFQDGEKILLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + GPL +YY + +LV HDD+ LP G +RL+ G GGHNG+KS++++
Sbjct: 62 ATYMNDSGRAVGPLMSYYNVDPADLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
G++ F R+++GI P +M ++L KF + D A
Sbjct: 122 -GDQHFKRVKVGIDHPQ-KMSVVDYVLGKFTPAEVAKFDDA 160
>gi|380031550|ref|YP_004888541.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum WCFS1]
gi|38257843|sp|Q88Z39.1|PTH_LACPL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|342240793|emb|CCC78027.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum WCFS1]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 93/161 (57%), Gaps = 3/161 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGN G +Y TRHN VGF ++D A ++ T +A F +LL KP
Sbjct: 3 MIVGLGNIGRQYAQTRHN-VGFMIVDELASKLNVTFQTSKFEAQVATAFQDGEKILLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMN SG + GPL +YY + +LV HDD+ LP G +RL+ G GGHNG+KS++++
Sbjct: 62 ATYMNDSGRAVGPLMSYYNVDPADLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIISHV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
G++ F R+++GI P +M ++L KF + D A
Sbjct: 122 -GDQHFKRVKVGIDHPQ-KMSVVDYVLGKFTPAEVAKFDDA 160
>gi|119715157|ref|YP_922122.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
gi|119535818|gb|ABL80435.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
Length = 217
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 111/200 (55%), Gaps = 8/200 (4%)
Query: 12 CTAVARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC-KATFGQGFVG 70
+ A WL VGLGNPG Y G RHN VG+ + D A G +A +G +G
Sbjct: 20 ADSAAPVWLVVGLGNPGPTYAGHRHN-VGYLVADELASRLGAPFRAHKSGRAEVVEGRLG 78
Query: 71 -----DAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGG 125
V+L + + YMN +G LA +YK+P R++ HD++ + +R++ GG
Sbjct: 79 VPGQPGPRVVLMRARCYMNETGGPVKQLAGFYKVPPERIIAVHDELDIAFDTMRVKLGGG 138
Query: 126 HGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGV 185
GHNGL+S+ ++ G +F R+R+GIGRPPG+ DP F+L +++ R+ + +
Sbjct: 139 DNGHNGLRSMRSSL-GTGDFYRVRVGIGRPPGRQDPADFVLSNYSSSERKVLPFQVDRAA 197
Query: 186 EVLKLLLSKGLTESARHFNT 205
+ ++ L+++GL + + FN+
Sbjct: 198 DAVEALVTEGLERTQQRFNS 217
>gi|417962920|ref|ZP_12605020.1| Peptidyl-tRNA hydrolase, partial [Candidatus Arthromitus sp. SFB-3]
gi|380335200|gb|EIA25451.1| Peptidyl-tRNA hydrolase, partial [Candidatus Arthromitus sp. SFB-3]
Length = 167
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +Y TRHN VGF M+D E IS++ + + +G G + ++ K
Sbjct: 2 FLIVGLGNIGSRYNNTRHN-VGFIMLDRICEDLNISLDNENDTSYYGTGIISGKNIMCMK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P+T+MNLSG + + Y+K+ ++ +LV +DD+ L +R++ G HGGHNG+K ++N
Sbjct: 61 PKTFMNLSGSAVLEIINYFKISIDDLLVIYDDIYLDVSKIRIKQRGSHGGHNGIKDIINK 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQE 183
++ F R++IGIG +D ++L KF +D+ ++
Sbjct: 121 INTDK-FKRIKIGIGENK-NIDLSNYVLSKFTYDEMRMLDSKYED 163
>gi|354807942|ref|ZP_09041391.1| peptidyl-tRNA hydrolase [Lactobacillus curvatus CRL 705]
gi|354513563|gb|EHE85561.1| peptidyl-tRNA hydrolase [Lactobacillus curvatus CRL 705]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG KY T+HN +GF +ID E +++N +A +G + L KP
Sbjct: 3 MIVGLGNPGSKYAKTKHN-IGFMVIDQLCERFNVTLNKHDFEAEYGSFKYEGETIFLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
T+MN SG S GPL YY++ L+ ++V DDM L G LRLR G GGHNG+KS++ +
Sbjct: 62 LTFMNDSGRSVGPLMKYYQVNLDELVVIQDDMDLTLGKLRLRQKGSAGGHNGIKSIIASV 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK 189
+ + EF R+++GI + P + ++L F+ + I+ AL + E L+
Sbjct: 122 QSS-EFKRVKVGI-QHPQKSTVVNWVLTPFDKDSAPIINQALDQACEALE 169
>gi|295425672|ref|ZP_06818359.1| aminoacyl-tRNA hydrolase [Lactobacillus amylolyticus DSM 11664]
gi|295064688|gb|EFG55609.1| aminoacyl-tRNA hydrolase [Lactobacillus amylolyticus DSM 11664]
Length = 185
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 3/169 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L GLGNPG KY T+HN GF +D + E S++ + + + + V+L +P
Sbjct: 3 LIAGLGNPGKKYDRTKHN-TGFMALDHYLEENNFSLDKDKFEGLWTKQKINGEDVILLEP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SG S + ++K+ +LV DDM +P G +R+R NG GGHNG+KS++ +
Sbjct: 62 QTYMNDSGRSIAQVVNFFKIDPADILVIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVL 188
G +F RL+IGI P +M +++L FN ++ +D A + G E++
Sbjct: 122 -GTEKFNRLKIGISHPQ-KMTVVSWVLTPFNEEQQKLMDDAFETGTEII 168
>gi|226365172|ref|YP_002782955.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
gi|254783884|sp|C1AY15.1|PTH_RHOOB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226243662|dbj|BAH54010.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
Length = 190
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 114/179 (63%), Gaps = 5/179 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG +Y+ TRHN VGF + + G + H K A QG + P +LA
Sbjct: 7 LVVGLGNPGPQYEKTRHN-VGFMVAGVLSARMGGKF-SAHKKSGAEIVQGRLEGRPTILA 64
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+++MNLSG + LA ++ + ++V HD++ L G +RL+ GG GGHNGL+S+
Sbjct: 65 KPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQ 124
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
+ G +++ R R+GIGRPPG+MDP +++L+ F+++ R+ +D +E + ++L+L GL
Sbjct: 125 SL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRLGL 182
>gi|310777820|ref|YP_003966153.1| peptidyl-tRNA hydrolase [Ilyobacter polytropus DSM 2926]
gi|309747143|gb|ADO81805.1| peptidyl-tRNA hydrolase [Ilyobacter polytropus DSM 2926]
Length = 189
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG+KY TRHN +GFE+ID AE +S + G+ + D V L KP
Sbjct: 3 LIVGLGNPGEKYSKTRHN-IGFEVIDMLAEDLKVSGFREKFQGLIGETVIKDEKVFLLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
QT+MNLSG S + +YK+ P ++V +DDM L G L+++ G GHNG+KS++++
Sbjct: 62 QTFMNLSGNSINEVIKFYKIDPEEDLIVIYDDMDLDLGQLKIKVKGSPAGHNGIKSIISH 121
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLK-LLLSKGLT 197
N F R++ GIG+ + + F+L +F+ +D ++ + + L+ +K ++
Sbjct: 122 IGEN--FLRVKCGIGKAKSREETVNFVLGRFSKEESNEVDPMIENASKAAQSLITAKDIS 179
Query: 198 ESARHFN 204
+ +N
Sbjct: 180 RVMQKYN 186
>gi|86156548|ref|YP_463333.1| peptidyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|119390909|sp|Q2IM62.1|PTH_ANADE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85773059|gb|ABC79896.1| peptidyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 192
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG++Y TRHN VGF + D A+ G S A + +G V + KP
Sbjct: 3 LVVGLGNPGEEYARTRHN-VGFVVADRLAQLAGASFTAKKFAAELAEARLGPERVWILKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMN SGE+ G ++KL L+ ++V HDD+ L ++L+ GGHGGHNG+KSV N
Sbjct: 62 QTYMNHSGEAVGAALRFWKLGLDDLVVVHDDLELEPFRVQLKVGGGHGGHNGVKSV-NAH 120
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G+ E+AR+R+G+GRPP +MDP ++L KF +D +++ VE +L + G ++
Sbjct: 121 VGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAAKA 180
Query: 200 ARHFN 204
N
Sbjct: 181 MNQVN 185
>gi|386867185|ref|YP_006280179.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
gi|385701268|gb|AFI63216.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
Length = 199
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 109/195 (55%), Gaps = 10/195 (5%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVG----DAPV 74
WL VGLGNPG KY+ TRHN +GF ++ A+ I A G+G + A V
Sbjct: 6 WLIVGLGNPGVKYRNTRHN-MGFMTVNELAKRWSIHFANHKGLADLGKGTMSLNGQTAKV 64
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
L KP TYMN SG++ + YY + L+ ++V HDDM L G ++L+ G GGHNG+KS
Sbjct: 65 FLCKPLTYMNDSGQAVQSIREYYHINLDHIVVIHDDMDLEFGRIKLKSGGSAGGHNGIKS 124
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKA----FLLQKFNAIARERIDTALQEGVEVLKL 190
+ + ++AR+R+G+G D ++L +FNA R+++ L +G + +
Sbjct: 125 IDRCLH-SPDYARVRMGVGHASRSGDAHDNTINWVLGEFNAAQRKQLPEFLADGADAAET 183
Query: 191 LLSKGLTESARHFNT 205
++ +GLT++ FN
Sbjct: 184 IVFEGLTKAQDKFNA 198
>gi|444431725|ref|ZP_21226889.1| peptidyl-tRNA hydrolase [Gordonia soli NBRC 108243]
gi|443887565|dbj|GAC68610.1| peptidyl-tRNA hydrolase [Gordonia soli NBRC 108243]
Length = 190
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 117/192 (60%), Gaps = 8/192 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG +Y+ TRHN +G + D S G VH K A +G VL+A
Sbjct: 5 LVVGLGNPGTRYEKTRHN-IGAMVADGLVASAGERWK-VHKKSGAELASLVLGGEQVLVA 62
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+TYMN SG PL +Y + ++V HD++ + G +RL+ GG GGHNGL+S+
Sbjct: 63 KPRTYMNESGRQVAPLMKFYSVAAADLVVVHDELDIDFGAVRLKSGGGEGGHNGLRSIAQ 122
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G ++F R+R+GIGRPPG+ DP F+L+ F AR ++ ++ G + ++LL+S+ L
Sbjct: 123 SI-GTKDFLRVRMGIGRPPGRQDPADFVLRPFPTSARADVELLVEHGCDAVELLVSRPL- 180
Query: 198 ESARHFNTIQKY 209
E+A+ NT+ +
Sbjct: 181 ETAQ--NTVHTW 190
>gi|374290018|ref|YP_005037103.1| Peptidyl-tRNA hydrolase [Bacteriovorax marinus SJ]
gi|301168559|emb|CBW28149.1| Peptidyl-tRNA hydrolase [Bacteriovorax marinus SJ]
Length = 190
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN + +E D + +Q + + + K + V+ KP
Sbjct: 5 LIVGLGNPGAEYRNTRHN-IAWETFDNLSFAQNLRWQSKY-KGEMATTEIEGEKVIFLKP 62
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QT+MNLSGES PLA ++K+P+ +LV HD++ L G + + GG GHNGLKS+
Sbjct: 63 QTFMNLSGESVAPLANFFKIPVEDILVVHDELDLNFGTIAYKDGGGLAGHNGLKSIAQCL 122
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G + F RLR+GIGRP ++L ++ E +++ L+ + ++ + KG +
Sbjct: 123 -GKQNFKRLRVGIGRPV-HGSVSNWVLSGYHGEDAEFLESYLKGAAKAVEAYIEKGFQSA 180
Query: 200 ARHFN 204
AR ++
Sbjct: 181 ARTYS 185
>gi|419720618|ref|ZP_14247838.1| aminoacyl-tRNA hydrolase [Lachnoanaerobaculum saburreum F0468]
gi|383303180|gb|EIC94645.1| aminoacyl-tRNA hydrolase [Lachnoanaerobaculum saburreum F0468]
Length = 211
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 16 ARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVL 75
++ L VGLGNPG +Y TRHN GF +++ A G ++ K F + +G+ +
Sbjct: 20 SKMKLIVGLGNPGREYVNTRHN-AGFYVVEKLAYELGEDISERKYKGVFTKVRIGNEKAI 78
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
+ +P TYMN SGES Y+K+ + V+V +DD+ L G LR+R G GGHNG+KS+
Sbjct: 79 ILEPLTYMNNSGESVRAFMDYFKIDASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSL 138
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + G +F R+++G+G P ++D +L FN ++ +D A + +E +KL+++
Sbjct: 139 IAHM-GTSDFPRIKVGVGEKPPRIDLADHVLGHFNDEDKKLLDEAASDAIEAIKLMVAGE 197
Query: 196 LTESARHFNT 205
+ +N
Sbjct: 198 YDMAMNRYNV 207
>gi|421250514|ref|ZP_15706964.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 2082239]
gi|395612091|gb|EJG72137.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 2082239]
Length = 189
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 93/154 (60%), Gaps = 7/154 (4%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK---ATFGQGFVGDAPVLL 76
L VGLGNPGDKY T+HN VGF +ID A+ Q ++ H K A F+ + L
Sbjct: 4 LLVGLGNPGDKYFETKHN-VGFMLIDQLAKKQNVTF--THDKIFQADLASFFLNGEKIYL 60
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
KP T+MN SG++ L YY L ++ +L+ +DD+ + G +RLR G GGHNG+KS++
Sbjct: 61 VKPTTFMNESGKAVHALLTYYGLDIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSII 120
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFN 170
+ G + F R++IGIGRP M ++L KF+
Sbjct: 121 QHI-GTQVFNRVKIGIGRPKNGMSVVHYVLSKFD 153
>gi|288942089|ref|YP_003444329.1| peptidyl-tRNA hydrolase [Allochromatium vinosum DSM 180]
gi|288897461|gb|ADC63297.1| peptidyl-tRNA hydrolase [Allochromatium vinosum DSM 180]
Length = 194
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 98/175 (56%), Gaps = 3/175 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFVGDAPVLLAK 78
L VGLGNPG +Y+ TRHN VGF ++A A +QG S + + V L K
Sbjct: 8 LIVGLGNPGAQYEATRHN-VGFWWVEAIARAQGESFRAEPKFLGELARVRIAGQDVRLLK 66
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMN SG+S +A Y+ +P R+L+ HD++ LP GV R++ GGH GHNGL+ ++
Sbjct: 67 PSTYMNRSGQSVVAVARYFDIPPERILIAHDELDLPVGVARIKQGGGHAGHNGLRDSISA 126
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLS 193
G+REF RLRIGI P + ++L + + RI +L + L L+
Sbjct: 127 L-GSREFWRLRIGIAHPGDRTLVTGYVLGRPSRDDESRIRESLDDADRRLAELVE 180
>gi|217967892|ref|YP_002353398.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
gi|217336991|gb|ACK42784.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
Length = 193
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 104/189 (55%), Gaps = 14/189 (7%)
Query: 22 VGLGNPGDKYKGTRHNQVGFEMID------AFAESQGISMNTVHCKATFGQGFVGDAPVL 75
+GLGNPG +Y TRHN VGF ++D F Q + N + TFG+ + + V
Sbjct: 7 IGLGNPGYEYANTRHN-VGFMVVDYLQNFYKFPSYQKTNFNLL----TFGK--ISNTKVY 59
Query: 76 LAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
L KPQTYMNLSG + +LV HDD+ LP G +R++ NG GGHNG+KS+
Sbjct: 60 LVKPQTYMNLSGIGVKEFIEKFAFAPEELLVIHDDLDLPIGTIRIKFNGKDGGHNGIKSI 119
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
+ + F RLRIGIG+P + ++L KFN + I+ LQ ++++ ++ +G
Sbjct: 120 IKEINTSN-FYRLRIGIGKPQDKNQIVEYVLGKFNEDELKTIEKILQSSHQIIETIIKEG 178
Query: 196 LTESARHFN 204
++ +N
Sbjct: 179 WDKAQNLYN 187
>gi|269796294|ref|YP_003315749.1| peptidyl-tRNA hydrolase [Sanguibacter keddieii DSM 10542]
gi|269098479|gb|ACZ22915.1| peptidyl-tRNA hydrolase [Sanguibacter keddieii DSM 10542]
Length = 202
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 114/194 (58%), Gaps = 9/194 (4%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAP----- 73
WL VGLGNPG +Y G RHN VG ++D A G S + +A + +G P
Sbjct: 9 WLVVGLGNPGPQYAGNRHN-VGQMVLDELASRHGGSFSAHRSRAAVAEVRLGVLPGGVPG 67
Query: 74 --VLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
V+LAKP TYMN SG LA Y+++ + VLV HD++ +P G +R + GG GGHNG
Sbjct: 68 PRVVLAKPSTYMNTSGGPVAGLAQYFQVEPDHVLVVHDELDIPFGDVRCKIGGGEGGHNG 127
Query: 132 LKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLL 191
L+ + G +++ R+R GIGRPPG+MD F+L+ F + R+ + L + ++++
Sbjct: 128 LRDISKAL-GTKDYLRVRTGIGRPPGRMDTADFVLKDFGTVERKELPFLLDTSADAVEMV 186
Query: 192 LSKGLTESARHFNT 205
+++GL ++ F+T
Sbjct: 187 VTEGLEKAQMAFHT 200
>gi|386852721|ref|YP_006270734.1| peptidyl-tRNA hydrolase, PTH1 family [Actinoplanes sp. SE50/110]
gi|359840225|gb|AEV88666.1| peptidyl-tRNA hydrolase, PTH1 family [Actinoplanes sp. SE50/110]
Length = 195
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 116/190 (61%), Gaps = 5/190 (2%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTV-HCKATFGQGFV--GDAPV 74
PWL VGLGNPG +Y G RHN VGF + D A G + +A G+G + G +
Sbjct: 6 PWLVVGLGNPGREYAGNRHN-VGFMVADLLASRLGAKLGRAKRAQAEAGEGRLGFGGPKL 64
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+L KP T+MNLSG LA ++K+P+ V+ HD++ +P G +R + GG GGHNGL+S
Sbjct: 65 VLVKPLTFMNLSGAPVVSLAQFFKVPVAHVIAVHDELDVPFGQVRAKRGGGEGGHNGLRS 124
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
M+ ++++AR+R GIGRPPG+ DP ++L F++ R+ +D + +V++ ++ +
Sbjct: 125 -MSKSLASKDYARVRFGIGRPPGRQDPADYVLADFSSAERKELDFLVDRAADVVEAIVLE 183
Query: 195 GLTESARHFN 204
G+ + ++
Sbjct: 184 GVEWAQNKYH 193
>gi|338812330|ref|ZP_08624509.1| peptidyl-tRNA hydrolase [Acetonema longum DSM 6540]
gi|337275680|gb|EGO64138.1| peptidyl-tRNA hydrolase [Acetonema longum DSM 6540]
Length = 200
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ VGLGNPG +Y TRHN VGF +D AE +A + G PV+L KP
Sbjct: 17 VVVGLGNPGQEYSQTRHN-VGFITLDQLAERWQCENWRFKHEALVSEYRGGAEPVILVKP 75
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG + + +YKL V+V DDM LP G LRLR GG GGH G++S++ +
Sbjct: 76 QTYMNLSGVAVASVLNWYKLKPEDVVVVFDDMDLPTGKLRLRLQGGSGGHKGIESLLVHL 135
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
+ F R+R+GIGRPP + ++L +F A + ++ ++ V+ ++ +L G T++
Sbjct: 136 DKD-TFIRMRVGIGRPPAGWETANYVLGRFTAEEKAPMEASITRAVDAVEYILKHGATKA 194
Query: 200 ARHFN 204
FN
Sbjct: 195 MNEFN 199
>gi|154249289|ref|YP_001410114.1| peptidyl-tRNA hydrolase [Fervidobacterium nodosum Rt17-B1]
gi|171769442|sp|A7HKM4.1|PTH_FERNB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154153225|gb|ABS60457.1| Aminoacyl-tRNA hydrolase [Fervidobacterium nodosum Rt17-B1]
Length = 180
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 107/188 (56%), Gaps = 14/188 (7%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG+KY TRHN VGF ++D + S N ++ + + L KP
Sbjct: 2 IVIGLGNPGEKYSNTRHN-VGFMVLDRLSNSWKKGPNYLYSDIN-----ISGEKIKLIKP 55
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE + LP + ++V +DD+ LP G +R+R NG GGHNG+KS++ +F
Sbjct: 56 MTYMNLSGE------VFKYLPHDDIIVVYDDLDLPLGKIRIRKNGSAGGHNGIKSII-SF 108
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G ++F R+R+GIG P +D ++L F E +D + E ++ ++ G+ ++
Sbjct: 109 IG-QDFPRIRVGIGPKPENIDAADYVLSNFTKEEFEVLDKIINLCTEAIEYIVENGIDKA 167
Query: 200 ARHFNTIQ 207
+N+I+
Sbjct: 168 MNRYNSIE 175
>gi|424851136|ref|ZP_18275533.1| peptidyl-tRNA hydrolase [Rhodococcus opacus PD630]
gi|356665801|gb|EHI45872.1| peptidyl-tRNA hydrolase [Rhodococcus opacus PD630]
Length = 190
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 114/179 (63%), Gaps = 5/179 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDAPVLLA 77
L VGLGNPG +Y+ TRHN VGF + + G + H K A QG + P +LA
Sbjct: 7 LVVGLGNPGPQYEKTRHN-VGFMVAGVLSARMGGKF-SAHKKSGAEIVQGRLEGRPTILA 64
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KP+++MNLSG + LA ++ + ++V HD++ L G +RL+ GG GGHNGL+S+ +
Sbjct: 65 KPRSFMNLSGSAVAGLARFFSVDPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISS 124
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G +++ R R+GIGRPPG+MDP +++L+ F+++ R+ +D +E + ++L+L GL
Sbjct: 125 AL-GTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRVGL 182
>gi|269926460|ref|YP_003323083.1| peptidyl-tRNA hydrolase [Thermobaculum terrenum ATCC BAA-798]
gi|269790120|gb|ACZ42261.1| peptidyl-tRNA hydrolase [Thermobaculum terrenum ATCC BAA-798]
Length = 193
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 111/190 (58%), Gaps = 4/190 (2%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
R +L VGLGNPG +Y+ TRHN +GF ++D A S ++ +A + + +L
Sbjct: 3 REFLIVGLGNPGKEYEHTRHN-IGFLVVDELARRYKSSGFSLIDRALVAEICIDGHKAIL 61
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPL-NRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSV 135
AKP TYMN SG++ L Y L + ++V +DD+ LP G +R+R G GGH G++S+
Sbjct: 62 AKPVTYMNNSGQAVKLLLRRYNLEYQSSLIVIYDDLDLPFGTIRVRTKGSSGGHRGVQSI 121
Query: 136 MNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKG 195
++ G+ EF R+R+GIGR P ++DP ++L ++N ID + + ++ L+ +G
Sbjct: 122 IDTI-GSNEFLRVRVGIGRDP-KLDPVDYVLGRWNKEQLPYIDHMITHAADAVESLIKEG 179
Query: 196 LTESARHFNT 205
+ + FNT
Sbjct: 180 VEITMNSFNT 189
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.141 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,623,737,216
Number of Sequences: 23463169
Number of extensions: 154543271
Number of successful extensions: 282165
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3845
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 270750
Number of HSP's gapped (non-prelim): 4111
length of query: 219
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 82
effective length of database: 9,144,741,214
effective search space: 749868779548
effective search space used: 749868779548
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 74 (33.1 bits)