BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027742
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NLS8|PTHM_ARATH Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana
GN=At5g19830 PE=2 SV=1
Length = 219
Score = 330 bits (846), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 161/213 (75%), Positives = 181/213 (84%), Gaps = 2/213 (0%)
Query: 2 LINRFLRRGFCTA-VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHC 60
+++R RR +CT+ V RPWLF+GLGNPGDKYKGTRHN +GFEMID FAES GI MN V+
Sbjct: 1 MLSRLSRRCYCTSSVHRPWLFLGLGNPGDKYKGTRHN-IGFEMIDVFAESVGIQMNLVNF 59
Query: 61 KATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRL 120
KA GQGFV D PV+LAKPQTYMNLSGES+GPLAAYYKLPLNRVLV HDDM LPCGVLRL
Sbjct: 60 KAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRL 119
Query: 121 RHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTA 180
+ GGHG HNGLKSVMN+FRGNREFARLRIGIG+PPGQMDPKAFLLQKF+ ARER+D A
Sbjct: 120 QEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKA 179
Query: 181 LQEGVEVLKLLLSKGLTESARHFNTIQKYKHIR 213
L EGV+ LKL+L+K ES R FN QKYKH++
Sbjct: 180 LAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212
>sp|Q9M5P4|CRS2_MAIZE Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1
Length = 256
Score = 247 bits (631), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG+KY GTRHN VGFEM+D A +GI+MNT+ K+ G G +G+ PVL+
Sbjct: 61 PWLIAGLGNPGNKYYGTRHN-VGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVV 119
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+YMN SGE+ GPLAAYY++PL +L+ +DD LP GVLRL+ GGHG HNGL++V+
Sbjct: 120 KPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIE 179
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G REF RL IGIG PPG+MDP+AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 180 HLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 239
Query: 198 ESARHFNTIQKYKHIRL 214
S FN +QKYK R+
Sbjct: 240 GSTERFNLVQKYKFHRV 256
>sp|Q5ZCL8|CRS2_ORYSJ Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0132800 PE=2 SV=1
Length = 259
Score = 243 bits (620), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG KY GTRHN VGFEM+D A +GI+MNT+ K+ G G +G+ PVLL
Sbjct: 64 PWLIAGLGNPGSKYHGTRHN-VGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLV 122
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ+Y+N SGE+ GPLAAYY++PL +LV +D+M LP GVLRL+ GGHG HNGL++VM
Sbjct: 123 KPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVME 182
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+RE RL IGIG PPG+MD +AFLLQKF++ R +IDTAL++GV+ ++ L+ KG +
Sbjct: 183 CLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFS 242
Query: 198 ESARHFNTIQKYK 210
S FN +QKYK
Sbjct: 243 GSIERFNLVQKYK 255
>sp|Q8GW64|PTHC_ARATH Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana
GN=At1g18440 PE=2 SV=2
Length = 288
Score = 239 bits (611), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 151/195 (77%), Gaps = 1/195 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY+GTRHN VGFEM+DA A+++GISMNTV+ KA FG+G +G+ P++LA
Sbjct: 94 PWLIVGLGNPGKKYQGTRHN-VGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLA 152
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQT+MNLSGES G + ++YK+PL +VLV +DD+ LP G LRL GGHGGHNG++S+++
Sbjct: 153 KPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIID 212
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+G+R+F RLRIGIGRPPG+MD F+L++FN +E +D Q G+E +++LL +G
Sbjct: 213 RLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFN 272
Query: 198 ESARHFNTIQKYKHI 212
+SA NT + + +
Sbjct: 273 KSATFVNTRKSMEQL 287
>sp|Q5N9Q7|PTHM_ORYSJ Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp.
japonica GN=Os01g0693900 PE=2 SV=1
Length = 250
Score = 236 bits (603), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
Query: 17 RPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLL 76
+PWLFVGLGNPG Y+GTRHN VGFEMID AE++GIS++++ KA G+G +GDAP++L
Sbjct: 54 KPWLFVGLGNPGKVYQGTRHN-VGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIML 112
Query: 77 AKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVM 136
AKPQT+MN SGES G L +Y+K+PLN+VLV +DD+ LP LRL GGHGGHNG++S++
Sbjct: 113 AKPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSII 172
Query: 137 NNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
N+ + NR+F RLRIGIGRPPG+MDP F+L+ FN +E +D A G+E ++++ +G
Sbjct: 173 NHLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGF 232
Query: 197 TESARHFNTIQKYKHI 212
+SA + NT Q + +
Sbjct: 233 NKSATYVNTAQSSEML 248
>sp|Q9LF14|CRS2B_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-B,
chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1
Length = 240
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 141/193 (73%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG+KY GTRHN VGFEMID A +G+ MNT+ KA G G + D P+LLA
Sbjct: 45 PWLIVGLGNPGNKYHGTRHN-VGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLA 103
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQTYMN SGES G LA++Y++PL +L+ +D+M LP GVLRL+ GG G HNG+KSVM
Sbjct: 104 KPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMG 163
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R F RL IGIG+PPG MD KAFLLQKF+ + +++I+ AL++G E +K L+ G
Sbjct: 164 HLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFN 223
Query: 198 ESARHFNTIQKYK 210
+ FN +QKYK
Sbjct: 224 QGISRFNLVQKYK 236
>sp|Q9FKN4|CRS2A_ARATH Chloroplastic group IIB intron splicing facilitator CRS2-A,
chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1
Length = 246
Score = 233 bits (595), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 140/193 (72%), Gaps = 1/193 (0%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG KY GTRHN +GFEMID A + ISMNT+ KA G G VG+ P+LL
Sbjct: 51 PWLIVGLGNPGLKYYGTRHN-IGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLV 109
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
KPQ YMN SGES GPLAAYY++PL +L+ +DDMGL GVLRL+ GGH HNGLK+V
Sbjct: 110 KPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTE 169
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
+ G R + RL IGIG PPG MD KAFLLQKF+ + R+++D L++GVE +K L+ +G +
Sbjct: 170 HLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFS 229
Query: 198 ESARHFNTIQKYK 210
+S FN QKYK
Sbjct: 230 DSISRFNLGQKYK 242
>sp|Q10LI6|CRS2L_ORYSJ CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os03g0347800 PE=2 SV=1
Length = 186
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/117 (74%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPV 74
V PWLFVGLGNPG+KY+ TRHN VGF+MID FA+SQGIS+ KA FG+G V PV
Sbjct: 57 VINPWLFVGLGNPGEKYQCTRHN-VGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPV 115
Query: 75 LLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNG 131
LLAKPQTYMNLSGES GPLAAYYKLPLNRVLV DDM LPCGVLRL+ GG+G HNG
Sbjct: 116 LLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>sp|Q47SW2|PTH_THEFY Peptidyl-tRNA hydrolase OS=Thermobifida fusca (strain YX) GN=pth
PE=3 SV=1
Length = 213
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 119/181 (65%), Gaps = 2/181 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG KY G RHN VGF ++D A +G A + VGDAPV+LAK
Sbjct: 35 WLVVGLGNPGPKYAGNRHN-VGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAK 93
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P +YMNLSG L+A+YK+P++R++V HD++ +P L+L+ GG GHNGL+S+ +
Sbjct: 94 PASYMNLSGGPVAKLSAFYKVPVDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITAS 153
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ ++ R+R+GIGRPPG+MD +F+LQ F+ R+ +D + + ++ +++ GL +
Sbjct: 154 L-GSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEK 212
Query: 199 S 199
+
Sbjct: 213 A 213
>sp|B8G3X3|PTH_CHLAD Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans (strain MD-66 /
DSM 9485) GN=pth PE=3 SV=1
Length = 188
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG++Y TRHN +GF ++ AE G++ K+ +G + V L K
Sbjct: 2 WLIVGLGNPGERYARTRHN-IGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSG++ L +YK+ P +LV +DD+ LP LRLR G G HNG++S++
Sbjct: 61 PQTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVG 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G EF RLRIGIG+PPGQMD ++L +F + L + +++++S+GLT
Sbjct: 121 QL-GTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLT 179
Query: 198 ESARHFNTI 206
+ +N +
Sbjct: 180 AAMNRYNPL 188
>sp|A8F920|PTH_BACP2 Peptidyl-tRNA hydrolase OS=Bacillus pumilus (strain SAFR-032)
GN=pth PE=3 SV=1
Length = 188
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 109/184 (59%), Gaps = 2/184 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
FVGLGNPG +Y+ TRHN VGF ID ++ I +N FG GFV VLL KP
Sbjct: 4 FVGLGNPGKEYEKTRHN-VGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE PL YY +PL + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGECVRPLMDYYDIPLEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESA 200
G+ EF R RIGIGRP M ++L +F+ + I +A+Q VE + L+K E
Sbjct: 122 GSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLEVM 181
Query: 201 RHFN 204
FN
Sbjct: 182 NDFN 185
>sp|Q181A2|PTH_CLOD6 Peptidyl-tRNA hydrolase OS=Clostridium difficile (strain 630)
GN=pth PE=3 SV=1
Length = 186
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ VGLGNPG KY+ TRHN VGF++ID A+ IS+ + KA G+G VG VLL K
Sbjct: 2 YVVVGLGNPGKKYEKTRHN-VGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGE+ + YYK+ L+ ++V +DD+ L G +R+R G G HNG+KS+
Sbjct: 61 PQTYMNLSGETLIDIYKYYKVDLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITKC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ +F R+R+G+ +P D F+L +F + I+ AL++ + + ++ + +
Sbjct: 121 L-GSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDM 179
Query: 199 SARHFN 204
S +N
Sbjct: 180 SMNKYN 185
>sp|Q2J5Z1|PTH_FRASC Peptidyl-tRNA hydrolase OS=Frankia sp. (strain CcI3) GN=pth PE=3
SV=1
Length = 197
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL GLGNPG Y G RHN GF ++D AE G + + +A + + A +LA
Sbjct: 10 PWLVAGLGNPGPTYAGNRHN-AGFMVVDLLAERTGSRLKSHRSRADVAETRLAGARAVLA 68
Query: 78 KPQTYMNLSGESTGPLAA---YYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKS 134
+P ++MNLSG GP+AA +YK+ ++R++V HD++ +P G +RL+ GG GHNGL+S
Sbjct: 69 RPLSFMNLSG---GPVAAARSFYKVEVSRLIVVHDELDIPFGAVRLKRGGGDNGHNGLRS 125
Query: 135 VMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSK 194
+ + G R++ R+R+GIGRPPG+MDP F+L+ F + R + L+ + +++L++
Sbjct: 126 ISSAL-GTRDYLRVRVGIGRPPGRMDPADFVLRDFTSTERRELPLLLEHAADSVEMLIAD 184
Query: 195 GLTESARHFNTI 206
GL + ++ +
Sbjct: 185 GLEPAQNRYHAL 196
>sp|B9LE93|PTH_CHLSY Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC
29364 / DSM 637 / Y-400-fl) GN=pth PE=3 SV=1
Length = 188
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG++Y TRHN +GF +D AE G++ + +G + V+LAK
Sbjct: 2 WLIVGLGNPGERYARTRHN-IGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSG++ L +YK+ P +LV +DD+ LP LR+R G G HNG++S++
Sbjct: 61 PQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G EF RLR+GIG+PPG+MD ++L +F + L + ++++L +GLT
Sbjct: 121 QL-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLT 179
Query: 198 ESARHFNTI 206
+ +N +
Sbjct: 180 TAMNRYNPL 188
>sp|A9WBS1|PTH_CHLAA Peptidyl-tRNA hydrolase OS=Chloroflexus aurantiacus (strain ATCC
29366 / DSM 635 / J-10-fl) GN=pth PE=3 SV=1
Length = 188
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG++Y TRHN +GF +D AE G++ + +G + V+LAK
Sbjct: 2 WLIVGLGNPGERYARTRHN-IGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKL-PLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
PQTYMNLSG++ L +YK+ P +LV +DD+ LP LR+R G G HNG++S++
Sbjct: 61 PQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVA 120
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G EF RLR+GIG+PPG+MD ++L +F + L + ++++L +GLT
Sbjct: 121 QL-GTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLT 179
Query: 198 ESARHFNTI 206
+ +N +
Sbjct: 180 TAMNRYNPL 188
>sp|A7GJW3|PTH_BACCN Peptidyl-tRNA hydrolase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=pth PE=3 SV=1
Length = 186
Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ L ++ +DD+ LP G LRLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIAHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F A ++ A+++ + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEEMVDVNHAIEKAANACEEWLNKSFLQV 180
Query: 200 ARHFNT 205
FN
Sbjct: 181 MNDFNN 186
>sp|A1TEG1|PTH_MYCVP Peptidyl-tRNA hydrolase OS=Mycobacterium vanbaalenii (strain DSM
7251 / PYR-1) GN=pth PE=3 SV=1
Length = 192
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 122/197 (61%), Gaps = 8/197 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN GF ++D A+ G VH K A G +
Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHN-AGFMVVDILADRMGEKFK-VHKKSGAEVATGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKP+ YMN SG GPLA +Y + V++ HD++ + G +RL+ GG GHNGL
Sbjct: 59 PVVLAKPRVYMNESGRQVGPLAKFYSVAPADVVIVHDELDIDFGRIRLKAGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + GN +F R+R+GIGRPPG +F+L+ FN++ R+ + T L++ + +LL+
Sbjct: 119 RSVASALGGN-DFQRVRVGIGRPPGHKSGASFVLENFNSVERKEVPTILEQAADATELLV 177
Query: 193 SKGLTESARHFNTIQKY 209
++GL E A+ NT+ +
Sbjct: 178 AQGL-EPAQ--NTVHAW 191
>sp|Q0RCD6|PTH_FRAAA Peptidyl-tRNA hydrolase OS=Frankia alni (strain ACN14a) GN=pth PE=3
SV=1
Length = 197
Score = 150 bits (380), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Query: 18 PWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLA 77
PWL VGLGNPG Y G RHN GF ++D AE G + + +A + + +LA
Sbjct: 10 PWLVVGLGNPGPGYAGNRHN-AGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGTRAILA 68
Query: 78 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMN 137
+P ++MNLSG + +YK+ RV+V HD++ +P G +RL+ GG GHNGL+S+ +
Sbjct: 69 RPLSFMNLSGGPVSAVRTFYKIDPARVIVVHDELDIPFGSVRLKRGGGDNGHNGLRSISS 128
Query: 138 NFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G R++ R+R+GIGRPPG+MDP ++L+ F A R + L+ + +++L++ GL
Sbjct: 129 AL-GTRDYLRVRVGIGRPPGRMDPADYVLRDFAAAERRELPLLLEHSADSVEMLITDGLE 187
Query: 198 ESARHFNTI 206
+ ++ +
Sbjct: 188 PTQNRYHAL 196
>sp|A0PXL3|PTH_CLONN Peptidyl-tRNA hydrolase OS=Clostridium novyi (strain NT) GN=pth
PE=3 SV=1
Length = 188
Score = 150 bits (380), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN VGF++ID +E I +N K +G G + + V+L K
Sbjct: 2 FLIVGLGNPGKEYEHTRHN-VGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + +YK+P V+V +DD+ L G +R+R G GGHNG+K+++ +
Sbjct: 61 PLTYMNLSGESIKEVTDFYKIPKENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
F G+ F R+++G+G+P Q D + +L KFN RE + + + + ++ KG E
Sbjct: 121 F-GSDVFPRIKVGVGQPV-QRDLVSHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAE 178
Query: 199 SARHFN 204
+ FN
Sbjct: 179 AMNKFN 184
>sp|Q63HI2|PTH_BACCZ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ZK / E33L)
GN=pth PE=3 SV=1
Length = 186
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>sp|B9IZD4|PTH_BACCQ Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain Q1) GN=pth PE=3
SV=1
Length = 186
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>sp|Q81J96|PTH_BACCR Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=pth PE=3 SV=2
Length = 186
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>sp|Q6HPW6|PTH_BACHK Peptidyl-tRNA hydrolase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=pth PE=3 SV=1
Length = 186
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>sp|Q81VY9|PTH_BACAN Peptidyl-tRNA hydrolase OS=Bacillus anthracis GN=pth PE=3 SV=1
Length = 186
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>sp|Q9F8Q3|PTH_CARHZ Peptidyl-tRNA hydrolase OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=pth PE=3 SV=2
Length = 187
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 114/186 (61%), Gaps = 3/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ GLGNPG +Y+ TRHN GF ++D A+ GI + K+ G+G + VLL K
Sbjct: 2 FIIAGLGNPGQEYENTRHN-AGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSG + ++YKLPL+R++V +DD+ LP G +RLR G GGH G+ S+++
Sbjct: 61 PQTYMNLSGTAVQEAVSFYKLPLSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIISC 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ E RL+IGIGR P D K ++LQ F RE ++ L+ E + + L++G +
Sbjct: 121 L-GSEEIPRLKIGIGR-PAVGDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNK 178
Query: 199 SARHFN 204
+ FN
Sbjct: 179 AMTDFN 184
>sp|Q73FF7|PTH_BACC1 Peptidyl-tRNA hydrolase OS=Bacillus cereus (strain ATCC 10987)
GN=pth PE=3 SV=2
Length = 186
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF ID A+ IS+N K FG GFV V+L KP
Sbjct: 3 LIVGLGNPGREYELTRHN-IGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES PL YYK+ + +V +DD+ +P G LRLR G GGHNG+KS +++
Sbjct: 62 LTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+R+GI RP M ++L +F + ++ ++++ + + L+K +
Sbjct: 122 -GTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQI 180
Query: 200 ARHFNT 205
FN+
Sbjct: 181 MNTFNS 186
>sp|Q6MJR3|PTH_BDEBA Peptidyl-tRNA hydrolase OS=Bdellovibrio bacteriovorus (strain ATCC
15356 / DSM 50701 / NCIB 9529 / HD100) GN=pth PE=3 SV=1
Length = 187
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
WL VGLGNPG +YK TRHN +GF +D E G KA Q + D PV+ K
Sbjct: 2 WLIVGLGNPGGEYKLTRHN-IGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES PL +YK+PL R++V HD++ P ++++ N GHGGHNG+KS+ +
Sbjct: 61 PQTYMNLSGESVQPLMGFYKIPLERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSI-SG 119
Query: 139 FRGNREFARLRIGIGRPPGQMDP-KAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLT 197
G+ ++ RLR+G+GRP P ++L KF ++ L + + ++ ++ G+
Sbjct: 120 LMGSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQ 179
Query: 198 ESARHFNT 205
+++ FNT
Sbjct: 180 KASTKFNT 187
>sp|Q3Z8W2|PTH_DEHE1 Peptidyl-tRNA hydrolase OS=Dehalococcoides ethenogenes (strain 195)
GN=pth PE=3 SV=1
Length = 189
Score = 147 bits (370), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L +GLGNPG +Y G RHN VGF+ + FA+ IS + C + G G + D ++LAKP
Sbjct: 3 LIIGLGNPGKEYSGNRHN-VGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG++ L Y L ++V DD+ LP G +RLR G GGHNG+ S++ +
Sbjct: 62 QTYMNLSGKAASQLLRRYNLKAADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIITDI 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAF---LLQKFNAIARERIDTALQEGVEVLKLLLSKGL 196
G +EF RL+IGIG+P + + +L F RE +D A+ E L LL+ GL
Sbjct: 122 -GTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFGL 180
Query: 197 TESARHFNT 205
++ FN+
Sbjct: 181 DTASNRFNS 189
>sp|B1IGZ7|PTH_CLOBK Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Okra /
Type B1) GN=pth PE=3 SV=1
Length = 189
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE ID L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDQREIIDKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>sp|Q65PG8|PTH_BACLD Peptidyl-tRNA hydrolase OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=pth PE=3 SV=1
Length = 188
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+F GLGNPG Y+ TRHN VGF ID ++ I ++ +G GFV VLL KP
Sbjct: 3 VFAGLGNPGKTYENTRHN-VGFMTIDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY++P++ + V +DD+ LP G +RLR G GGHNG+KS + +
Sbjct: 62 LTYMNLSGECLRPLLDYYEIPVDNLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I A+++ + + L K E
Sbjct: 122 -GTSEFNRIRIGIGRPVNGMKVVDYVLGAFTDEEEPAIKEAVRQSAKACEASLEKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>sp|P37470|PTH_BACSU Peptidyl-tRNA hydrolase OS=Bacillus subtilis (strain 168) GN=spoVC
PE=3 SV=1
Length = 188
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ GLGNPG Y+ TRHN VGF +ID A+ I +N +G GFV VLL KP
Sbjct: 3 VIAGLGNPGKNYENTRHN-VGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + + V +DD+ LP G +RLR G GGHNG+KS++ +
Sbjct: 62 LTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G EF R+RIGIGRP M ++L F I+ A+ + V+ + LSK E
Sbjct: 122 -GTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEEAVDKSVKACEASLSKPFLEV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNEFN 185
>sp|B2TI10|PTH_CLOBB Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Eklund 17B
/ Type B) GN=pth PE=3 SV=1
Length = 191
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG KY TRHN +GFE+ID + I +N + +G+GF+ + V+L K
Sbjct: 2 FLIVGLGNPGSKYDNTRHN-IGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S +A +YK+ ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+++G+G+P +D ++L KF+ +E + +++ ++ ++ + +
Sbjct: 121 LSTDV-FPRIKVGVGQP--NIDLVNYVLGKFSKEEKEVLKESIEVATNSVEEIIKQDVNS 177
Query: 199 SARHFNTIQKYKHI 212
+ FN + K I
Sbjct: 178 AMNKFNGFKANKSI 191
>sp|B2UXS9|PTH_CLOBA Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Alaska E43
/ Type E3) GN=pth PE=3 SV=1
Length = 191
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 4/194 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG KY TRHN +GFE+ID + I +N K +G+GF+ + V+L K
Sbjct: 2 FLIVGLGNPGSKYDNTRHN-IGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSG+S +A +YK+ ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PTTYMNLSGDSVREVANFYKISNENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIAN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+++G+G+P + ++L KF+ +E + +++ ++ ++ + +
Sbjct: 121 LSTDV-FPRIKVGVGQPNDNL--VDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINS 177
Query: 199 SARHFNTIQKYKHI 212
+ FN + K I
Sbjct: 178 AMNKFNGFKANKSI 191
>sp|A5I7R5|PTH_CLOBH Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=pth PE=3 SV=1
Length = 189
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>sp|A7FPJ7|PTH_CLOB1 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=pth PE=3 SV=1
Length = 189
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>sp|Q5L3U7|PTH_GEOKA Peptidyl-tRNA hydrolase OS=Geobacillus kaustophilus (strain HTA426)
GN=pth PE=3 SV=1
Length = 186
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
LFVGLGNPG +Y+ TRHN VGF +ID A+ +S+ T + FG V V L KP
Sbjct: 3 LFVGLGNPGKEYEQTRHN-VGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGE PL YY + ++ V+V +DD+ LP G +RLR G GGHNG+KS++++
Sbjct: 62 LTYMNLSGECVRPLMDYYDIAIDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIHHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +F R+RIGIGRP G ++L +F + +D A+ + + + +
Sbjct: 122 -GTEQFKRIRIGIGRPAGGQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQV 180
Query: 200 ARHFN 204
FN
Sbjct: 181 MNDFN 185
>sp|A9KR32|PTH_CLOPH Peptidyl-tRNA hydrolase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=pth PE=3 SV=1
Length = 191
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
++ +GLGNP +Y+ TRHN +GF+ I A+ IS++T KA G+G +G V+LAK
Sbjct: 2 YIIIGLGNPTREYEATRHN-IGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
PQTYMNLSGES L +YK+ ++V +DD+ L G LR+R G GGHNG+K+++ +
Sbjct: 61 PQTYMNLSGESVRELIDFYKVTKEEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIAH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G+ EF R++IG+G P D ++L +F I AL++ + + +L G
Sbjct: 121 L-GSDEFCRIKIGVGDKPKNWDLADYVLARFPKEEEPAIREALEKVSKACETILRDGAKV 179
Query: 199 SARHFN 204
+ FN
Sbjct: 180 AMNLFN 185
>sp|A4T6N5|PTH_MYCGI Peptidyl-tRNA hydrolase OS=Mycobacterium gilvum (strain PYR-GCK)
GN=pth PE=3 SV=1
Length = 192
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 119/198 (60%), Gaps = 8/198 (4%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG +Y TRHN +GF + D A+ G + VH K A G +
Sbjct: 1 MAEPVLVVGLGNPGPQYATTRHN-IGFMVADVLADRMGETFK-VHKKSGAEVTTGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
PV+LAKP+ YMN SG GPLA +Y + V++ HD++ + G +RL+ GG GHNGL
Sbjct: 59 PVVLAKPRVYMNESGRQVGPLAKFYSIAPTDVVIIHDELDIDFGRIRLKAGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
+SV + N +F R+R+GIGRPPGQ +F+L+ FN+ R + T +++ + +LL+
Sbjct: 119 RSVGSALSTN-DFQRVRVGIGRPPGQKSGASFVLEPFNSRERPELGTIIEQAADATELLI 177
Query: 193 SKGLTESARHFNTIQKYK 210
G+ E A+ NT+ +
Sbjct: 178 ELGI-EPAQ--NTVHAWS 192
>sp|C1FNE6|PTH_CLOBJ Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=pth PE=3 SV=1
Length = 189
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>sp|C0ZHD7|PTH_BREBN Peptidyl-tRNA hydrolase OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=pth PE=3 SV=1
Length = 189
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
+ +GLGNPG KY+ TRHN GF ID ++ GI + +A G+G + VLL KP
Sbjct: 3 VIIGLGNPGKKYEDTRHN-AGFMAIDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSGES + +YKL + ++V +DD+ LP G LRLR G GGHNG+KS++ +
Sbjct: 62 QTYMNLSGESVAEVLKFYKLIPDDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQHL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G +EF R+++GI RP ++L F R I A+ + + + +
Sbjct: 122 -GTQEFKRIKVGISRPEPGRSVSDYVLNTFPVAERADIQEAVSLAADACAMWTRESFLKV 180
Query: 200 ARHFNTIQK 208
HFN+++K
Sbjct: 181 MNHFNSLKK 189
>sp|A4J0Q6|PTH_DESRM Peptidyl-tRNA hydrolase OS=Desulfotomaculum reducens (strain MI-1)
GN=pth PE=3 SV=1
Length = 206
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 112/182 (61%), Gaps = 7/182 (3%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y TRHN +GF +ID A+ +S KA Q +G V+LAKP
Sbjct: 3 LIVGLGNPGTEYAKTRHN-IGFMVIDRLADESRVSTEKNQHKAQICQITIGSEKVILAKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
QTYMNLSG+S L +YKL + + V DDM LP GVLR+R NG GG GLK+++
Sbjct: 62 QTYMNLSGQSVVALMNWYKLSPDELFVITDDMDLPPGVLRIRKNGSAGGQRGLKNII-EL 120
Query: 140 RGNREFARLRIGIGRPP-GQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
G ++F R+R+GIGRP G +D +L K + E I+ A+Q VE +K+ + +G T+
Sbjct: 121 LGTQQFPRMRVGIGRPEHGAVD---HVLGKISEAEAELINPAIQTAVEAVKVWVLEG-TQ 176
Query: 199 SA 200
+A
Sbjct: 177 AA 178
>sp|B1KTE2|PTH_CLOBM Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Loch Maree
/ Type A3) GN=pth PE=3 SV=1
Length = 189
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDQREVIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>sp|A7GJD4|PTH_CLOBL Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain Langeland
/ NCTC 10281 / Type F) GN=pth PE=3 SV=1
Length = 189
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKKTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>sp|C3KW96|PTH_CLOB6 Peptidyl-tRNA hydrolase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=pth PE=3 SV=1
Length = 189
Score = 144 bits (363), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGN G +YK TRHN +GF+++D AE I +N K ++G+G +G+ ++L K
Sbjct: 2 YLVVGLGNIGKEYKQTRHN-IGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES A +YK+ ++V +DDM + G LR+R G GGHNG+K+++ +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQH 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ F R+R+GIG+P + ++L KF+ RE I+ L + ++ G+TE
Sbjct: 121 LNSDI-FPRVRVGIGQPDENV--VNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTE 177
Query: 199 SARHFNTIQ 207
+ +N ++
Sbjct: 178 AMNKYNGVK 186
>sp|Q899I4|PTH_CLOTE Peptidyl-tRNA hydrolase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=pth PE=3 SV=1
Length = 188
Score = 144 bits (362), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
Query: 19 WLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAK 78
+L VGLGNPG +Y+ TRHN +GFE +D + I + K FG G + + V+L K
Sbjct: 2 FLLVGLGNPGKEYEKTRHN-IGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLK 60
Query: 79 PQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNN 138
P TYMNLSGES + YY +P+ V+V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 61 PTTYMNLSGESLREIIEYYNIPITNVIVIYDDVDLEVGRLRIRTKGSAGGHNGIKSIIYN 120
Query: 139 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTE 198
+ +F RLRIG+G+P Q D + +L KF + I+ L+ E+ ++++G E
Sbjct: 121 L-NSEDFIRLRIGVGKP--QRDMVSHVLGKFAKEDEKNIEEVLKIIPELAYTIINQGPQE 177
Query: 199 SARHFNT 205
+ +N
Sbjct: 178 AMNKYNN 184
>sp|B1YGP7|PTH_EXIS2 Peptidyl-tRNA hydrolase OS=Exiguobacterium sibiricum (strain DSM
17290 / JCM 13490 / 255-15) GN=pth PE=3 SV=1
Length = 185
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 100/167 (59%), Gaps = 2/167 (1%)
Query: 21 FVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQ 80
VGLGNPG KY TRHN +GF IDA A+ GI + KA FG G + V+L KP
Sbjct: 4 IVGLGNPGAKYTNTRHN-IGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVKPL 62
Query: 81 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFR 140
TYMNLSGE+ PL +YK+ + VLV +DD+ LP +RLR G GGHNG+KS++ +
Sbjct: 63 TYMNLSGEAVRPLLDFYKIAVEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQHL- 121
Query: 141 GNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEV 187
G ++ RL++G+GRPP + ++L F + + L + V +
Sbjct: 122 GTQDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQTTLQHVLSDSVNI 168
>sp|Q8XHJ8|PTH_CLOPE Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain 13 /
Type A) GN=pth PE=3 SV=1
Length = 188
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF++ID A I +N K G+GF+ + V+L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHN-IGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES LA +YKL + ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 LTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G++ F R+++G+G+P + +L KF+ RE I+ + + + ++ ES
Sbjct: 122 GGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKES 178
Query: 200 ARHFNTI 206
FN +
Sbjct: 179 MNKFNGV 185
>sp|Q0TMG7|PTH_CLOP1 Peptidyl-tRNA hydrolase OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=pth PE=3 SV=1
Length = 188
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 20 LFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKP 79
L VGLGNPG +Y+ TRHN +GF++ID A I +N K G+GF+ + V+L KP
Sbjct: 3 LIVGLGNPGKQYEQTRHN-IGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLKP 61
Query: 80 QTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNF 139
TYMNLSGES LA +YKL + ++V +DD+ L G LR+R G GGHNG+KS++ N
Sbjct: 62 LTYMNLSGESIRELANFYKLEDDEIIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQNL 121
Query: 140 RGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTES 199
G++ F R+++G+G+P + +L KF+ RE I+ + + + ++ ES
Sbjct: 122 GGDK-FPRVKVGVGQPKDNL--VNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKES 178
Query: 200 ARHFNTI 206
FN +
Sbjct: 179 MNKFNGV 185
>sp|Q1B425|PTH_MYCSS Peptidyl-tRNA hydrolase OS=Mycobacterium sp. (strain MCS) GN=pth
PE=3 SV=1
Length = 192
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 110/184 (59%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN VGF + D A G H K A G +
Sbjct: 1 MAEPLLVVGLGNPGPNYAKTRHN-VGFVVADLLAGRIGSGFKA-HRKSGADIATGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+TYMN SG + GPLA +Y + V+V HD++ + G +RL+ GG GHNGL
Sbjct: 59 AVVLAKPRTYMNESGRNVGPLAKFYSVAPADVIVIHDELDIDFGRIRLKFGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
KSV G ++F R+R+G+GRPPG+ D ++L+ F ++ R + T ++ + +LL+
Sbjct: 119 KSVAAAL-GTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELLI 177
Query: 193 SKGL 196
++GL
Sbjct: 178 AQGL 181
>sp|A1UL23|PTH_MYCSK Peptidyl-tRNA hydrolase OS=Mycobacterium sp. (strain KMS) GN=pth
PE=3 SV=1
Length = 192
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 110/184 (59%), Gaps = 5/184 (2%)
Query: 15 VARPWLFVGLGNPGDKYKGTRHNQVGFEMIDAFAESQGISMNTVHCK--ATFGQGFVGDA 72
+A P L VGLGNPG Y TRHN VGF + D A G H K A G +
Sbjct: 1 MAEPLLVVGLGNPGPNYAKTRHN-VGFVVADLLAGRIGSGFKA-HRKSGADIATGRLAGR 58
Query: 73 PVLLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGL 132
V+LAKP+TYMN SG + GPLA +Y + V+V HD++ + G +RL+ GG GHNGL
Sbjct: 59 AVVLAKPRTYMNESGRNVGPLAKFYSVAPADVIVIHDELDIDFGRIRLKFGGGVAGHNGL 118
Query: 133 KSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERIDTALQEGVEVLKLLL 192
KSV G ++F R+R+G+GRPPG+ D ++L+ F ++ R + T ++ + +LL+
Sbjct: 119 KSVAAAL-GTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELLI 177
Query: 193 SKGL 196
++GL
Sbjct: 178 AQGL 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,369,591
Number of Sequences: 539616
Number of extensions: 3729187
Number of successful extensions: 8479
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6327
Number of HSP's gapped (non-prelim): 735
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)