Your job contains 1 sequence.
>027743
MASSSLTSALTSQSKSPFYPQQLSQLPSSPLFSFARSLKTFRTNAKSLLLHKKNSNSVSL
TVKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVL
RPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGESNTYLDGIYL
LFTYFTKPESIEALERTMKADDDVIRSSSFKVRKQKQKG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027743
(219 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2019489 - symbol:AT1G64510 species:3702 "Arabi... 580 2.5e-56 1
TIGR_CMR|CHY_0035 - symbol:CHY_0035 "ribosomal protein S6... 117 2.9e-07 1
TIGR_CMR|GSU_0665 - symbol:GSU_0665 "ribosomal protein S6... 115 4.8e-07 1
TIGR_CMR|BA_5723 - symbol:BA_5723 "ribosomal protein S6" ... 106 4.3e-06 1
TIGR_CMR|CJE_1213 - symbol:CJE_1213 "ribosomal protein S6... 104 7.0e-06 1
TIGR_CMR|SPO_2281 - symbol:SPO_2281 "ribosomal protein S6... 99 2.4e-05 1
TIGR_CMR|DET_1046 - symbol:DET_1046 "ribosomal protein S6... 86 0.00089 1
>TAIR|locus:2019489 [details] [associations]
symbol:AT1G64510 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
InterPro:IPR000529 InterPro:IPR020814 Pfam:PF01250 PROSITE:PS01048
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006412 EMBL:AC009519
GO:GO:0005840 GO:GO:0003735 GO:GO:0009535 GO:GO:0019843
Gene3D:3.30.70.60 InterPro:IPR014717 EMBL:AY072344 EMBL:AY114581
EMBL:AY085527 IPI:IPI00518160 RefSeq:NP_176632.1 UniGene:At.23432
UniGene:At.27560 ProteinModelPortal:Q8VY91 SMR:Q8VY91 STRING:Q8VY91
PaxDb:Q8VY91 PRIDE:Q8VY91 EnsemblPlants:AT1G64510.1 GeneID:842759
KEGG:ath:AT1G64510 GeneFarm:32 TAIR:At1g64510 eggNOG:NOG279078
HOGENOM:HOG000154193 InParanoid:Q8VY91 OMA:QYETMAV PhylomeDB:Q8VY91
ProtClustDB:CLSN2679309 Genevestigator:Q8VY91 GermOnline:AT1G64510
SUPFAM:SSF54995 Uniprot:Q8VY91
Length = 207
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 119/182 (65%), Positives = 136/182 (74%)
Query: 35 ARSLKTFRTNAKSLLLHKKNSNSVSLTVKAQTLXXXXXXXXXXXXXXXXXPTSVPPGSVG 94
+ SL+ F + +K + + + VK+Q L PTS P GS G
Sbjct: 27 SHSLRPFISKSKPMCASIQKRDGSQFVVKSQALDFSGTFFEGGFGSDDD-PTS-PSGS-G 83
Query: 95 TATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRG 154
+TA+EDK EPQCPPGLRQYETM VLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRG
Sbjct: 84 VSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRG 143
Query: 155 VIPLAYSIRKRNKAGESNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIRSSSFKVRK 214
VIPLAYSIRK+NKAGE+NTYLDGIYLLFTYFTKPESI LE + ADDD+IRSSSFK++K
Sbjct: 144 VIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKK 203
Query: 215 QK 216
+K
Sbjct: 204 RK 205
>TIGR_CMR|CHY_0035 [details] [associations]
symbol:CHY_0035 "ribosomal protein S6" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_00360 InterPro:IPR000529 InterPro:IPR020814
Pfam:PF01250 PROSITE:PS01048 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995
eggNOG:COG0360 KO:K02990 ProtClustDB:PRK00453 TIGRFAMs:TIGR00166
HOGENOM:HOG000040440 OMA:MVESKDW RefSeq:YP_358907.1
ProteinModelPortal:Q3AG27 STRING:Q3AG27 GeneID:3726848
KEGG:chy:CHY_0035 PATRIC:21273267 BioCyc:CHYD246194:GJCN-35-MONOMER
Uniprot:Q3AG27
Length = 96
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 25/96 (26%), Positives = 51/96 (53%)
Query: 111 LRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGE 170
LRQYE M +L P++ ++ ++ ++++ ++ GG ++ G AY I+K
Sbjct: 2 LRQYEVMYILHPELDAEKTESIIERFKGMIEQEGGEVTKIDRWGKRRFAYEIKKLR---- 57
Query: 171 SNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIR 206
+G Y++ + K E+ + L+R ++ DDV+R
Sbjct: 58 -----EGYYVVMNFKAKAETAQELDRLLRISDDVVR 88
>TIGR_CMR|GSU_0665 [details] [associations]
symbol:GSU_0665 "ribosomal protein S6" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00360
InterPro:IPR000529 InterPro:IPR020814 Pfam:PF01250 PROSITE:PS01048
GO:GO:0006412 GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.70.60 InterPro:IPR014717
SUPFAM:SSF54995 eggNOG:COG0360 KO:K02990 ProtClustDB:PRK00453
TIGRFAMs:TIGR00166 HOGENOM:HOG000040440 OMA:MVESKDW
RefSeq:NP_951722.1 ProteinModelPortal:Q74FE4 GeneID:2685562
KEGG:gsu:GSU0665 PATRIC:22024089 BioCyc:GSUL243231:GH27-684-MONOMER
Uniprot:Q74FE4
Length = 117
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 111 LRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGE 170
+R YET+++++P++ +DE LT K +++ + G+ + + GV LAY ++K +
Sbjct: 2 VRMYETIVIVQPELGDDELKGLTAKVTDIIGSFKGVLHRLEDWGVRKLAYPVKKSVR--- 58
Query: 171 SNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIRSSSFKVRKQ 215
G Y + I LER ++ DD V+R S K+ K+
Sbjct: 59 ------GRYYYVRFDGDAPLIAELERRLRLDDKVLRYQSVKLEKE 97
>TIGR_CMR|BA_5723 [details] [associations]
symbol:BA_5723 "ribosomal protein S6" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00360 InterPro:IPR000529 InterPro:IPR020814
InterPro:IPR020815 Pfam:PF01250 PROSITE:PS01048 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.70.60
InterPro:IPR014717 SUPFAM:SSF54995 eggNOG:COG0360 KO:K02990
ProtClustDB:PRK00453 TIGRFAMs:TIGR00166 RefSeq:NP_847869.1
RefSeq:YP_022409.1 RefSeq:YP_031564.1 PDB:3R3T PDBsum:3R3T
ProteinModelPortal:Q81JI2 DNASU:1085492
EnsemblBacteria:EBBACT00000011912 EnsemblBacteria:EBBACT00000018310
EnsemblBacteria:EBBACT00000024101 GeneID:1085492 GeneID:2815999
GeneID:2848522 KEGG:ban:BA_5723 KEGG:bar:GBAA_5723 KEGG:bat:BAS5327
HOGENOM:HOG000040440 OMA:RKYEVMY
BioCyc:BANT260799:GJAJ-5404-MONOMER
BioCyc:BANT261594:GJ7F-5580-MONOMER Uniprot:Q81JI2
Length = 96
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 111 LRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGE 170
+R+YE M ++RP + E+ + AL +++ +L G + G LAY I
Sbjct: 1 MRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEI-------- 52
Query: 171 SNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIR 206
N +G Y++ E+I +R K ++D++R
Sbjct: 53 -NDLREGFYMILNVNANAEAINEFDRLAKINEDILR 87
>TIGR_CMR|CJE_1213 [details] [associations]
symbol:CJE_1213 "ribosomal protein S6" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] HAMAP:MF_00360 InterPro:IPR000529 InterPro:IPR020814
Pfam:PF01250 PROSITE:PS01048 GO:GO:0006412 GO:GO:0005840
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995 eggNOG:COG0360
KO:K02990 ProtClustDB:PRK00453 TIGRFAMs:TIGR00166
HOGENOM:HOG000040440 RefSeq:YP_179201.1 ProteinModelPortal:Q5HU34
STRING:Q5HU34 GeneID:3231720 KEGG:cjr:CJE1213 PATRIC:20044222
OMA:MVESKDW BioCyc:CJEJ195099:GJC0-1239-MONOMER Uniprot:Q5HU34
Length = 125
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 111 LRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGE 170
++ YE + +L+P ++E+E A + +E+L V G LAY I+K
Sbjct: 1 MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNSAEIETVVPMGTRKLAYKIKK------ 54
Query: 171 SNTYLDGIYLLFTYFTKPESIEA-LERTMKADDDVIRSSSFKVRKQKQ 217
Y G Y + YF P ++ A LER ++ ++VIR K +K+
Sbjct: 55 ---YERGTYFVI-YFKAPTNLIAELERVLRITEEVIRFLIVKYENKKE 98
>TIGR_CMR|SPO_2281 [details] [associations]
symbol:SPO_2281 "ribosomal protein S6" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00360 InterPro:IPR000529 InterPro:IPR020814 Pfam:PF01250
PROSITE:PS01048 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995 eggNOG:COG0360
HOGENOM:HOG000040439 KO:K02990 ProtClustDB:PRK00453
TIGRFAMs:TIGR00166 OMA:ITEASPM RefSeq:YP_167505.1
ProteinModelPortal:Q5LR50 GeneID:3194317 KEGG:sil:SPO2281
PATRIC:23377917 Uniprot:Q5LR50
Length = 117
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 114 YETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGESNT 173
YE +M+ R D+S + L + + +L GG V+ GV +AY I K K
Sbjct: 4 YEHVMIARQDLSNTQAEGLIEHFGAVLSDNGGSLVDHEYWGVKTMAYKINKNRK------ 57
Query: 174 YLDGIYLLFTYFTKPESIEALERTMKADDDVIRSSSFKV 212
G Y +++ +ER M+ DDV+R + KV
Sbjct: 58 ---GHYAFLRTDAPASAVQEMERLMRLHDDVMRVLTIKV 93
>TIGR_CMR|DET_1046 [details] [associations]
symbol:DET_1046 "ribosomal protein S6" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
HAMAP:MF_00360 InterPro:IPR000529 InterPro:IPR020814 Pfam:PF01250
PROSITE:PS01048 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
Gene3D:3.30.70.60 InterPro:IPR014717 SUPFAM:SSF54995 eggNOG:COG0360
KO:K02990 ProtClustDB:PRK00453 TIGRFAMs:TIGR00166
HOGENOM:HOG000040440 RefSeq:YP_181762.1 ProteinModelPortal:Q3Z7N7
STRING:Q3Z7N7 GeneID:3229652 KEGG:det:DET1046 PATRIC:21609141
OMA:YPIREYV BioCyc:DETH243164:GJNF-1047-MONOMER Uniprot:Q3Z7N7
Length = 109
Score = 86 (35.3 bits), Expect = 0.00089, P = 0.00089
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 111 LRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGE 170
LR YE +++L D +++ A+ + + + G + EV + G LAY I +
Sbjct: 14 LRDYELVVILTTDTPKEKVEAILEGISKTIAEKDGSFTEVNHWGKRKLAYLIGR------ 67
Query: 171 SNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIRSSSFKVRKQ 215
Y +G Y+ KP SI + ++ + VIR + + ++
Sbjct: 68 ---YGEGYYVFIKMKAKPSSIRKINADLRISEQVIRHMAINMDEE 109
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.356 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 219 169 0.00082 108 3 11 23 0.44 32
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 549 (58 KB)
Total size of DFA: 122 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.98u 0.18s 16.16t Elapsed: 00:00:01
Total cpu time: 15.98u 0.18s 16.16t Elapsed: 00:00:01
Start: Sat May 11 07:37:18 2013 End: Sat May 11 07:37:19 2013